BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014369
(426 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81027|HMGCL_ARATH Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis
thaliana GN=HMGCL PE=1 SV=2
Length = 468
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/434 (73%), Positives = 362/434 (83%), Gaps = 9/434 (2%)
Query: 1 MSSLEEPLGLDKLPSMSTIDRIQRFSSNACRPSGDGMGMGSCWIEGSSCSTSNSYDEDYD 60
MSSLEEPL DKLPSMST+DRIQRFSS ACRP D +GMG WIEG C+TSNS +D
Sbjct: 36 MSSLEEPLSFDKLPSMSTMDRIQRFSSGACRPRDD-VGMGHRWIEGRDCTTSNSCIDDDK 94
Query: 61 EYTREAFPWRRHTRDMSHGDSFSRRTVSLGRNHKMFGSACD-------IYNSNCNDKDIR 113
+ +E+FPWRRHTR +S G+ R GR + G+ + Y++ N+
Sbjct: 95 SFAKESFPWRRHTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTS 154
Query: 114 DITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSP 173
I+NK KGIP+FVKIVEVGPRDGLQNEKN VPT VKVELI+RLVSSGLPVVEATSFVSP
Sbjct: 155 HISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSP 214
Query: 174 KWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNI 233
KWVPQLADA+DVM+AV L+GARLPVLTPNLKGF+AA++AGAKEVAIFASASE+FS SNI
Sbjct: 215 KWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNI 274
Query: 234 NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE 293
NC+IE+SL+RYR VA AAK S+PVRGYVSCVVGCPVEG + PSKVAYV KEL+DMGCFE
Sbjct: 275 NCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFE 334
Query: 294 ISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 353
ISLGDTIG+GTPG+VVPMLEAVMAVVP +KLAVH HDTYGQ+L NIL+SLQMGIS VD S
Sbjct: 335 ISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQMGISIVDSS 394
Query: 354 VAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTA 413
+AGLGGCPYAKGASGNVATEDVVYML+GLGV TNVDL KL+ AGDFI+KHLGRP+GSK A
Sbjct: 395 IAGLGGCPYAKGASGNVATEDVVYMLNGLGVHTNVDLGKLIAAGDFISKHLGRPNGSKAA 454
Query: 414 IALN-RIAADASKI 426
+ALN RI ADASKI
Sbjct: 455 VALNRRITADASKI 468
>sp|P97519|HMGCL_RAT Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus
GN=Hmgcl PE=2 SV=1
Length = 325
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/308 (62%), Positives = 241/308 (78%)
Query: 112 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV 171
+R + + +P+ VKIVEVGPRDGLQNEK+ VPT VK++LI L +GLPV+EATSFV
Sbjct: 18 LRAASTSSMGTLPKRVKIVEVGPRDGLQNEKSIVPTPVKIKLIDMLSEAGLPVIEATSFV 77
Query: 172 SPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKS 231
SPKWVPQ+AD DV++ ++ G PVLTPN+KGFE A+AAGAKEV+IF +ASE F++
Sbjct: 78 SPKWVPQMADHSDVLKGIQKFPGINYPVLTPNMKGFEEAVAAGAKEVSIFGAASELFTRK 137
Query: 232 NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGC 291
N+NCSIE+S R+ V AA+ SI VRGYVSC +GCP EG + P+KVA VAK+L+ MGC
Sbjct: 138 NVNCSIEESFQRFDGVMQAARAASISVRGYVSCALGCPYEGKVSPAKVAEVAKKLYSMGC 197
Query: 292 FEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 351
+EISLGDTIGVGTPG + ML AV+ VPV LAVH HDTYGQ+L N L++LQMG+S VD
Sbjct: 198 YEISLGDTIGVGTPGLMKDMLTAVLHEVPVAALAVHCHDTYGQALANTLVALQMGVSVVD 257
Query: 352 CSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
SVAGLGGCPYAKGASGN+ATED+VYML+GLG+ T V+L+KL+ AGDFI + L R + SK
Sbjct: 258 SSVAGLGGCPYAKGASGNLATEDLVYMLTGLGIHTGVNLQKLLEAGDFICQALNRKTSSK 317
Query: 412 TAIALNRI 419
A A ++
Sbjct: 318 VAQATCKL 325
>sp|P35915|HMGCL_CHICK Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus
GN=HMGCL PE=1 SV=1
Length = 298
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/297 (65%), Positives = 237/297 (79%)
Query: 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADA 182
P+ VK+VEVGPRDGLQNEK+ VPT VK+ LI L +GLPV+EATSFVSP+WVPQ+AD
Sbjct: 2 FPQRVKVVEVGPRDGLQNEKSVVPTPVKIRLIDMLSETGLPVIEATSFVSPRWVPQMADH 61
Query: 183 RDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLV 242
+VM+ + L G PVLTPNLKGF+AA+AAGAKEV+IF +ASE F+K NINCSIE+SL
Sbjct: 62 AEVMQGINKLPGVSYPVLTPNLKGFQAAVAAGAKEVSIFGAASELFTKKNINCSIEESLE 121
Query: 243 RYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGV 302
R+ V +AA+ SIPVRGYVSCV+GCP EG I +KVA V+K+++ MGC+EISLGD IG+
Sbjct: 122 RFSEVMNAARAASIPVRGYVSCVLGCPYEGNISAAKVAEVSKKMYSMGCYEISLGDRIGI 181
Query: 303 GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPY 362
GTPG++ ML AVM VPV LAVH HDTYGQ+L NIL++LQMG+S VD SVAGLGGCPY
Sbjct: 182 GTPGSMKEMLAAVMKEVPVGALAVHCHDTYGQALANILVALQMGVSVVDASVAGLGGCPY 241
Query: 363 AKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIALNRI 419
A+GASGNVATED+VYML+GLG+ T VDL+KLM G FI L R + SK + A R+
Sbjct: 242 AQGASGNVATEDLVYMLNGLGIHTGVDLQKLMDTGTFICNALNRRTNSKVSQAACRL 298
>sp|P38060|HMGCL_MOUSE Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus
GN=Hmgcl PE=1 SV=2
Length = 325
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/309 (62%), Positives = 239/309 (77%)
Query: 111 DIRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSF 170
+R ++ + +P+ VKIVEVGPRDGLQNEK+ VPT VK+ LI L +GLPV+EATSF
Sbjct: 17 SLRAVSTSSMGTLPKQVKIVEVGPRDGLQNEKSIVPTPVKIRLIDMLSEAGLPVIEATSF 76
Query: 171 VSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSK 230
VSPKWVPQ+AD DV++ ++ G PVLTPN+KGFE A+AAGAKEV++F + SE F++
Sbjct: 77 VSPKWVPQMADHSDVLKGIQKFPGINYPVLTPNMKGFEEAVAAGAKEVSVFGAVSELFTR 136
Query: 231 SNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG 290
N NCSIE+S R+ V AA+ SI VRGYVSC +GCP EG + P+KVA VAK+L+ MG
Sbjct: 137 KNANCSIEESFQRFAGVMQAAQAASISVRGYVSCALGCPYEGKVSPAKVAEVAKKLYSMG 196
Query: 291 CFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 350
C+EISLGDTIGVGTPG + ML AVM VPV LAVH HDTYGQ+L N L++LQMG+S V
Sbjct: 197 CYEISLGDTIGVGTPGLMKDMLTAVMHEVPVTALAVHCHDTYGQALANTLVALQMGVSVV 256
Query: 351 DCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGS 410
D SVAGLGGCPYAKGASGN+ATED+VYML+GLG+ T V+L+KL+ AGDFI + L R + S
Sbjct: 257 DSSVAGLGGCPYAKGASGNLATEDLVYMLNGLGIHTGVNLQKLLEAGDFICQALNRKTSS 316
Query: 411 KTAIALNRI 419
K A A ++
Sbjct: 317 KVAQATCKL 325
>sp|Q29448|HMGCL_BOVIN Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus
GN=HMGCL PE=2 SV=2
Length = 325
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/308 (62%), Positives = 239/308 (77%)
Query: 112 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV 171
+R ++ + P+ VKIVEVGPRDGLQNEKN VPT VK++LI L +GLPVVEATSFV
Sbjct: 18 LRAVSTSSVGTFPKQVKIVEVGPRDGLQNEKNIVPTPVKIKLIDMLSEAGLPVVEATSFV 77
Query: 172 SPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKS 231
SPKWVPQ+AD +V++ ++ G PVLTPN KGF+AA+AAGAKEVAIF +ASE F+K
Sbjct: 78 SPKWVPQMADHAEVLKGIQKFPGVNYPVLTPNFKGFQAAVAAGAKEVAIFGAASELFTKK 137
Query: 232 NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGC 291
NINCSI++SL R+ + AA+ I VRGYVSCV+GCP EG I P+KVA V K+L+ MGC
Sbjct: 138 NINCSIDESLQRFDEILKAARAAGISVRGYVSCVLGCPYEGKISPAKVAEVTKKLYSMGC 197
Query: 292 FEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 351
+EISLGDTIGVGTPG + ML AV+ VPV LAVH HDTYGQ+L N L +LQMG+S +D
Sbjct: 198 YEISLGDTIGVGTPGAMKDMLSAVLQEVPVTALAVHCHDTYGQALANTLTALQMGVSVMD 257
Query: 352 CSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
SVAGLGGCPYA+GASGN+ATED+VYML+GLG+ T V+L+KL+ AG FI + L R + SK
Sbjct: 258 SSVAGLGGCPYAQGASGNLATEDLVYMLAGLGIHTGVNLQKLLEAGAFICQALNRRTNSK 317
Query: 412 TAIALNRI 419
A A ++
Sbjct: 318 VAQATCKL 325
>sp|Q5R9E1|HMGCL_PONAB Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Pongo abelii
GN=HMGCL PE=2 SV=1
Length = 325
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/309 (61%), Positives = 238/309 (77%)
Query: 111 DIRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSF 170
+R ++ + +P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+E TSF
Sbjct: 17 SLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSF 76
Query: 171 VSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSK 230
VSPKWVPQ+ D +V++ ++ G PVLTPNLKGFEAA+AAGAKEVAIF +ASE F+K
Sbjct: 77 VSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVAIFGAASELFTK 136
Query: 231 SNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG 290
NINCSIE+S R+ A+ AA+ +I VRGYVSC +GCP EG I P+KVA V K+L+ MG
Sbjct: 137 KNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKLYSMG 196
Query: 291 CFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 350
C+EISLGDTIGVGTPG + ML AVM VP+ LAVH HDTYGQ+L N L++LQMG+S V
Sbjct: 197 CYEISLGDTIGVGTPGIMKGMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVV 256
Query: 351 DCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGS 410
D SVAGLGGCPYA+GASGN+ATED+VYML GLG+ T V+L+KL+ AG+FI + L R + S
Sbjct: 257 DSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSS 316
Query: 411 KTAIALNRI 419
K A A ++
Sbjct: 317 KVAQATCKL 325
>sp|Q8JZS7|HMGC2_MOUSE 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus
musculus GN=Hmgcll1 PE=2 SV=1
Length = 343
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/296 (62%), Positives = 235/296 (79%)
Query: 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL 179
L G+P +VKIVEVGPRDGLQNEK VPT +K+ELI +L +GL V+E TSFVS +WVPQ+
Sbjct: 41 LPGLPEYVKIVEVGPRDGLQNEKVIVPTDIKIELINQLSQTGLSVIEVTSFVSSRWVPQM 100
Query: 180 ADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIED 239
AD +VM +R G R PVLTPNL+GF+ A+AAGA E+A+F +ASE+FSK NINCSIE+
Sbjct: 101 ADHAEVMRGIRQYPGVRYPVLTPNLQGFQHAVAAGATEIAVFGAASESFSKKNINCSIEE 160
Query: 240 SLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299
S+ R++ V +A+ + IPVRGYVSC +GCP EG+I P KV V+K L+ MGC+EISLGDT
Sbjct: 161 SMGRFQEVISSARHMDIPVRGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEISLGDT 220
Query: 300 IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGG 359
IGVGTPG++ MLE+VM +P LAVH HDTYGQ+L NIL +LQMGI+ VD +V+GLGG
Sbjct: 221 IGVGTPGSMKMMLESVMKEIPPGALAVHCHDTYGQALANILTALQMGINVVDSAVSGLGG 280
Query: 360 CPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIA 415
CPYAKGASGNVATED++YML+G+G+ T VDL K+M AG+FI K + + + SK A A
Sbjct: 281 CPYAKGASGNVATEDLIYMLNGMGLNTGVDLYKVMEAGEFICKAVNKTTNSKVAQA 336
>sp|Q8HXZ6|HMGCL_MACFA Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Macaca
fascicularis GN=HMGCL PE=2 SV=1
Length = 325
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/308 (61%), Positives = 238/308 (77%)
Query: 112 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV 171
+R ++ + +P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+EATSFV
Sbjct: 18 LRAVSTSSMDTLPKQVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIEATSFV 77
Query: 172 SPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKS 231
SPKWVPQ+AD +V++ ++ G PVL PNLKGFEAA+AAGAKEV+IF +ASE F+K
Sbjct: 78 SPKWVPQMADHAEVLKGIQKFPGITYPVLIPNLKGFEAAVAAGAKEVSIFGAASELFTKK 137
Query: 232 NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGC 291
N+NCSIE+S R+ A+ AA+ +I VRGYVSCV+GCP EG I P+KVA V K+ + MGC
Sbjct: 138 NVNCSIEESFQRFDAILKAAQSANISVRGYVSCVLGCPYEGKISPAKVAEVTKKFYSMGC 197
Query: 292 FEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 351
+EISLGDTIGVGTPG + ML AVM VP LAVH HDTYGQ+L N L++LQMG+S VD
Sbjct: 198 YEISLGDTIGVGTPGIMKDMLSAVMQEVPPAALAVHCHDTYGQALANTLMALQMGVSVVD 257
Query: 352 CSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
SVAGLGGCPYA+GASGN+ATED+VYML GLG+ T V+L+KL+ AG+FI + L R + SK
Sbjct: 258 SSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSK 317
Query: 412 TAIALNRI 419
A A ++
Sbjct: 318 VAQATCKL 325
>sp|P35914|HMGCL_HUMAN Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Homo sapiens
GN=HMGCL PE=1 SV=2
Length = 325
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/309 (61%), Positives = 236/309 (76%)
Query: 111 DIRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSF 170
+R ++ + +P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+E TSF
Sbjct: 17 SLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSF 76
Query: 171 VSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSK 230
VSPKWVPQ+ D +V++ ++ G PVLTPNLKGFEAA+AAGAKEV IF +ASE F+K
Sbjct: 77 VSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTK 136
Query: 231 SNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG 290
NINCSIE+S R+ A+ AA+ +I VRGYVSC +GCP EG I P+KVA V K+ + MG
Sbjct: 137 KNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMG 196
Query: 291 CFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 350
C+EISLGDTIGVGTPG + ML AVM VP+ LAVH HDTYGQ+L N L++LQMG+S V
Sbjct: 197 CYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVV 256
Query: 351 DCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGS 410
D SVAGLGGCPYA+GASGN+ATED+VYML GLG+ T V+L+KL+ AG+FI + L R + S
Sbjct: 257 DSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSS 316
Query: 411 KTAIALNRI 419
K A A ++
Sbjct: 317 KVAQATCKL 325
>sp|Q8TB92|HMGC2_HUMAN 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Homo
sapiens GN=HMGCLL1 PE=1 SV=3
Length = 370
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/296 (62%), Positives = 232/296 (78%)
Query: 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL 179
L G+P FVKIVEVGPRDGLQNEK VPT +K+E I RL +GL V+E TSFVS +WVPQ+
Sbjct: 71 LSGLPEFVKIVEVGPRDGLQNEKVIVPTDIKIEFINRLSQTGLSVIEVTSFVSSRWVPQM 130
Query: 180 ADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIED 239
AD +VM+ + G R PVLTPNL+GF A+AAGA E+++F +ASE+FSK NINCSIE+
Sbjct: 131 ADHTEVMKGIHQYPGVRYPVLTPNLQGFHHAVAAGATEISVFGAASESFSKKNINCSIEE 190
Query: 240 SLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299
S+ ++ V +A+ ++IP RGYVSC +GCP EG+I P KV V+K L+ MGC+EISLGDT
Sbjct: 191 SMGKFEEVVKSARHMNIPARGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEISLGDT 250
Query: 300 IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGG 359
IGVGTPG++ MLE+VM +P LAVH HDTYGQ+L NIL +LQMGI+ VD +V+GLGG
Sbjct: 251 IGVGTPGSMKRMLESVMKEIPPGALAVHCHDTYGQALANILTALQMGINVVDSAVSGLGG 310
Query: 360 CPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIA 415
CPYAKGASGNVATED++YML+GLG+ T V+L K+M AGDFI K + + + SK A A
Sbjct: 311 CPYAKGASGNVATEDLIYMLNGLGLNTGVNLYKVMEAGDFICKAVNKTTNSKVAQA 366
>sp|A8WG57|HMGC2_DANRE 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Danio
rerio GN=hmgcll1 PE=2 SV=1
Length = 335
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/296 (64%), Positives = 230/296 (77%)
Query: 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL 179
L +P +VKIVEVGPRDGLQNEK VPT VK++LI L +GLPV+EATSFVS KWV Q+
Sbjct: 36 LPKLPVYVKIVEVGPRDGLQNEKEIVPTEVKIQLIDLLSQTGLPVIEATSFVSSKWVAQM 95
Query: 180 ADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIED 239
AD V++ ++ R PVLTPN++GF+AA+AAGA EVA+F SASE FS+ NINCSIE+
Sbjct: 96 ADHTAVLKGIKRSPDVRYPVLTPNIQGFQAAVAAGANEVAVFGSASETFSRKNINCSIEE 155
Query: 240 SLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299
SL R+ V AAK IPVRGYVSC +GCP EG + PS+V VAK L ++GC+E+SLGDT
Sbjct: 156 SLQRFEQVVSAAKQEGIPVRGYVSCALGCPYEGQVKPSQVTKVAKRLFELGCYEVSLGDT 215
Query: 300 IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGG 359
IGVGT G++ ML V+ VP LAVH HDTYGQ+LPNILI+LQMG+S VD SVAGLGG
Sbjct: 216 IGVGTAGSMAEMLSDVLTEVPAGALAVHCHDTYGQALPNILIALQMGVSVVDASVAGLGG 275
Query: 360 CPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIA 415
CP+AKGASGNV+TED++YML GLG+ET VDL K+M AGDFI K L R + SK + A
Sbjct: 276 CPFAKGASGNVSTEDLLYMLHGLGIETGVDLLKVMEAGDFICKALNRKTNSKVSQA 331
>sp|D4A5C3|HMGC2_RAT 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Rattus
norvegicus GN=Hmgcll1 PE=1 SV=1
Length = 343
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/296 (61%), Positives = 231/296 (78%)
Query: 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL 179
L G+P +VKIVEVGPRDGLQNEK VPT +K+E I +L +GL V+E TSFVS +WVPQ+
Sbjct: 41 LSGLPEYVKIVEVGPRDGLQNEKVIVPTDIKIEFINQLSQTGLSVIEVTSFVSSRWVPQM 100
Query: 180 ADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIED 239
AD +VM + G R PVL PNL+G + A+AAGA E+A+F +ASE+FSK NINCSIE+
Sbjct: 101 ADHAEVMGGIHQYPGVRYPVLVPNLQGLQHAVAAGATEIAVFGAASESFSKKNINCSIEE 160
Query: 240 SLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299
S+ R+ V +A+ ++IPVRGYVSC +GCP EG+I P KV V+K L+ MGC+EISLGDT
Sbjct: 161 SMGRFEQVISSARHMNIPVRGYVSCALGCPYEGSIMPQKVTEVSKRLYSMGCYEISLGDT 220
Query: 300 IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGG 359
+GVGTPG++ MLE+VM +P LAVH HDTYGQ+L NIL +LQMGI+ VD +V+GLGG
Sbjct: 221 VGVGTPGSMKTMLESVMKEIPPGALAVHCHDTYGQALANILTALQMGINVVDSAVSGLGG 280
Query: 360 CPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIA 415
CPYAKGASGNVATED++YML+G+G+ T VDL K+M AGDFI K + + + SK A A
Sbjct: 281 CPYAKGASGNVATEDLIYMLNGMGLNTGVDLHKVMEAGDFICKAVNKTTNSKVAQA 336
>sp|P13703|HMGCL_PSEMV Hydroxymethylglutaryl-CoA lyase OS=Pseudomonas mevalonii GN=mvaB
PE=3 SV=1
Length = 301
Score = 287 bits (735), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 149/290 (51%), Positives = 196/290 (67%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
VK+ EVGPRDGLQNE+ + +V LI L +GL +EA +FVSP+WVPQ+A + +V+
Sbjct: 4 VKVFEVGPRDGLQNERQPLSVAARVGLIGELAGTGLRHIEAGAFVSPRWVPQMAGSDEVL 63
Query: 187 EAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRA 246
+ +G L PN +GFEAA AG +EVA+FA+ASEAFS++NINCSI++S R+
Sbjct: 64 RQLPSNDGVSYTALVPNRQGFEAAQRAGCREVAVFAAASEAFSRNNINCSIDESFERFTP 123
Query: 247 VAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPG 306
V AA SI VRGYVSCV+GCP GA+ P VA VA+ L+++GC+EISLGDTIG G P
Sbjct: 124 VLRAANEASIRVRGYVSCVLGCPFSGAVAPEAVAKVARRLYELGCYEISLGDTIGAGRPD 183
Query: 307 TVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGA 366
+ E +PV LA H HDT+G ++ N+ +L G+ T D SVAGLGGCPY+ GA
Sbjct: 184 ETAQLFELCARQLPVAALAGHFHDTWGMAIANVHAALAQGVRTFDSSVAGLGGCPYSPGA 243
Query: 367 SGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIAL 416
SGNVATED++Y+L GLG T VDL + G I+ LG + S+ +AL
Sbjct: 244 SGNVATEDLLYLLHGLGYSTGVDLEAVAQVGVRISAQLGTANRSRAGLAL 293
>sp|O34873|HMGCL_BACSU Hydroxymethylglutaryl-CoA lyase YngG OS=Bacillus subtilis (strain
168) GN=yngG PE=1 SV=1
Length = 299
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 180/288 (62%)
Query: 124 PRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADAR 183
P+ V I EVGPRDGLQNE + T K+ I +L +GL +E TSFV PKW+P L DA
Sbjct: 4 PKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAI 63
Query: 184 DVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVR 243
DV + + +G L PN +G E A+ G E +F SASE ++ NIN S +SL
Sbjct: 64 DVAKGIDREKGVTYAALVPNQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHI 123
Query: 244 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVG 303
+ V + A+ ++ R Y+S V GCP E +P +V +++ L + G E+SLGDTIG
Sbjct: 124 LKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAA 183
Query: 304 TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYA 363
P V +LEA++A P ++A+H HDT G +L N++ +LQMGI+ D S GLGGCPYA
Sbjct: 184 NPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYA 243
Query: 364 KGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
G+SGN ATED+VYML + ++TNV L KL+ A +I + +G+P S+
Sbjct: 244 PGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSR 291
>sp|A3DF94|LEU1_CLOTH 2-isopropylmalate synthase OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=leuA PE=3 SV=1
Length = 511
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 47/304 (15%)
Query: 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVE-ATSFVSPKWVPQLADAR 183
R ++I + RDG Q + KV++ ++L G+ V+E SP D
Sbjct: 2 RRIRIFDTTLRDGEQTPGVNLNIQEKVDIAKQLARLGVDVIEPGFPLTSP------GDFE 55
Query: 184 DVMEAVRDLEGARLPVLTPNLKGFEAAIA------------AGAKEVAIFASASEAFSKS 231
V R++EG P + GF AI A K IF S+S+ K
Sbjct: 56 AVQRIAREVEG-------PYICGFSRAIIRDIDETWKAIKDAQKKCFHIFISSSDIQIKH 108
Query: 232 NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY-VAKELHDMG 290
+ + +D L ++ + AK Y V P++ + + Y V + D G
Sbjct: 109 QLGKTEKDVLEIVKSTVYHAK-------QYTDEVEYSPMDASRTRLEFLYEVIEAAIDNG 161
Query: 291 CFEISLGDTIGVGTP---GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGI 347
I++ DT+G TP G ++ + + + ++VH H+ G ++ N +++ G
Sbjct: 162 ATVINIPDTVGYATPIEFGELIQKIRKNVRNIDKAIISVHCHNDLGMAVANSIVAAMNGA 221
Query: 348 STVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKH 403
++C++ G+G +GN A E+VV ++ LG ET +DL +L ++++
Sbjct: 222 QQIECTINGVG------ERAGNAALEEVVTHIAARKDYLGFETGIDLSQLYKTSKIVSRY 275
Query: 404 LGRP 407
+G P
Sbjct: 276 MGIP 279
>sp|Q3ACM0|HOA_CARHZ 4-hydroxy-2-oxovalerate aldolase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=mhpE PE=3
SV=1
Length = 336
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Query: 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG 333
+PP K+ AK G + + D+ G TP V +EAV A V V + H H+ G
Sbjct: 142 VPPEKLVEQAKLFESYGADAVYITDSAGAMTPYDVKVRIEAVKAAVSV-PVGFHAHNNLG 200
Query: 334 QSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKL 393
++ N L +++ G + VD + GLG +GN TE +V +L+ LG ET VDL K+
Sbjct: 201 LAIGNTLAAIEAGATYVDGTARGLG------AGAGNSQTEILVAVLAKLGYETGVDLYKI 254
Query: 394 M-LAGDFINKHLGRPS 408
M +A + + + RP
Sbjct: 255 MDVAEEVVAPKMRRPQ 270
>sp|B8I1T7|LEU1_CLOCE 2-isopropylmalate synthase OS=Clostridium cellulolyticum (strain
ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=leuA PE=3
SV=1
Length = 508
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 34/277 (12%)
Query: 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEA-TSFVSPKWVPQLAD 181
+ R +KI + RDG Q + K+E+ ++LV G+ V+E + SP D
Sbjct: 1 MARTIKIFDTTLRDGEQTPGVNLNLQEKLEIAKQLVRLGVDVIEGGFAIASP------GD 54
Query: 182 ARDVMEAVRDLEGARLPVLTPNL-----KGFEAAIAAGAKEVAIFASASEAFSKSNINCS 236
+M R+L+G + L ++ + +EA A + + F + S+ K + +
Sbjct: 55 FESIMTLSRNLKGVTIASLCRSVEKDIDRAWEAVQYAESPRIHTFIATSDIHMKYKLKMT 114
Query: 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY-VAKELHDMGCFEIS 295
E+ L R ++ AK GY S V + + + Y V + + G ++
Sbjct: 115 EEEVLERAVSMVKRAK-------GYCSNVEFSAEDASRTREEFLYRVVEAVIKAGATTVN 167
Query: 296 LGDTIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDC 352
+ DT+G TP ++ + VP ++K ++VH H+ G ++ N L +++ G V+C
Sbjct: 168 IPDTVGYSTPLEFGRLIRNIRNNVPNIDKADISVHCHNDLGLAVANSLAAVENGAVQVEC 227
Query: 353 SVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVD 389
++ GLG +GN A E+++ +G+ T D
Sbjct: 228 TINGLG------ERAGNAALEEII-----MGINTRKD 253
>sp|Q764S0|HOA_BACPJ 4-hydroxy-2-oxovalerate aldolase OS=Bacillus sp. (strain JF8)
GN=nahM PE=3 SV=2
Length = 337
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG 333
+ P ++A AK + G + + D+ G P V+ + A+ V+ V + H H+ G
Sbjct: 143 LSPEELAQQAKLMESYGADIVYIVDSAGTMLPQDVIDRVIALKKVLNV-PIGFHAHNNLG 201
Query: 334 QSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKL 393
++ N L ++Q G + +D S GLG SGN TE +V +LS +G+ET +DL ++
Sbjct: 202 LAIGNSLAAIQAGATNIDASTRGLGA------GSGNTQTEVLVAVLSRMGIETGIDLFQI 255
Query: 394 MLAGDFI 400
M A ++I
Sbjct: 256 MDAAEYI 262
>sp|Q9FG67|MAM1_ARATH Methylthioalkylmalate synthase 1, chloroplastic OS=Arabidopsis
thaliana GN=MAM1 PE=1 SV=1
Length = 506
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 144/343 (41%), Gaps = 41/343 (11%)
Query: 91 RNHKMFGSACDIYNSNC--NDKDIRDITNKFLKGIPR------FVKIVEVGPRDGLQNEK 142
+N +F S C + N + D++ + ++ + IP +V++ + RDG Q+
Sbjct: 41 KNPALFISCCSSVSKNAATSSTDLKPVVERWPEYIPNKLPDGNYVRVFDTTLRDGEQSPG 100
Query: 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAV---RDLEGARLPV 199
++ K+E+ R+L + ++E S + +L + + + V D E +PV
Sbjct: 101 GSLTPPQKLEIARQLAKLRVDIMEVGFPGSSE--EELETIKTIAKTVGNEVDEETGYVPV 158
Query: 200 LTPNLK--------GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAA 251
+ + +EA A + +F S S+ K + + E+ + + A
Sbjct: 159 ICAIARCKHRDIEATWEALKYAKRPRILVFTSTSDIHMKYKLKKTQEEVIEMAVSSIRFA 218
Query: 252 KVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTP---GTV 308
K L G+ GC G + + E G +++GDT+G+ P G +
Sbjct: 219 KSL-----GFNDIQFGCEDGGRSDKDFLCKILGEAIKAGVTVVTIGDTVGINMPHEYGEL 273
Query: 309 VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASG 368
V L+A + +AVH H+ G + N + ++ G V+ ++ G+G SG
Sbjct: 274 VTYLKANTPGIDDVVVAVHCHNDLGLATANSIAGIRAGARQVEVTINGIG------ERSG 327
Query: 369 NVATEDVVYMLSGL------GVETNVDLRKLMLAGDFINKHLG 405
N + E+VV L GV T +D R++M + ++ G
Sbjct: 328 NASLEEVVMALKCRGAYVINGVYTKIDTRQIMATSKMVQEYTG 370
>sp|A4SR62|LEU1_AERS4 2-isopropylmalate synthase OS=Aeromonas salmonicida (strain A449)
GN=leuA PE=3 SV=1
Length = 524
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 31/275 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ + L G+ ++E VS D + V
Sbjct: 5 VIIFDTTLRDGEQALAASLTVKEKLQIAQALERLGVDIMEVGFPVSSP-----GDFQSVQ 59
Query: 187 EAVRDLEGARLPVLTPNL-----KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
R ++ +R+ L L EA A A + F S S +S + S ED L
Sbjct: 60 TIARHIKNSRVCALARALPQDIDAAGEALRVAEAFRIHTFISTSSIHVESKLKKSFEDVL 119
Query: 242 -VRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI 300
+ A+ HA +R C G P + + + G I++ DT+
Sbjct: 120 EMGVSAIKHA-------LRYTDDVEFSCEDAGRTPIDNLCRMVEAAIKAGARTINIPDTV 172
Query: 301 GVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 357
G P +++ + VP ++K ++VH HD G S+ N + ++QMG ++C++ G+
Sbjct: 173 GYTVPTEFSGIIQTLFNRVPNIDKAIISVHCHDDLGLSVANSIGAVQMGARQIECTINGI 232
Query: 358 GGCPYAKGASGNVATEDVVYMLSG----LGVETNV 388
G +GN + E+V +L LGV TN+
Sbjct: 233 G------ERAGNCSLEEVAMILKTRADLLGVHTNI 261
>sp|A0KGM9|LEU1_AERHH 2-isopropylmalate synthase OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=leuA PE=3
SV=1
Length = 524
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ + L G+ V+E VS D + V
Sbjct: 5 VIIFDTTLRDGEQALAASLTVKEKLQIAQALERLGVDVMEVGFPVSSP-----GDFQSVQ 59
Query: 187 EAVRDLEGARLPVLTPNL-----KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
R ++ +R+ L L EA A A + F S S +S + S ED L
Sbjct: 60 TIARHIKQSRVCALARALPKDIDAAGEALRVAEAFRIHTFISTSSIHVESKLKKSFEDVL 119
Query: 242 -VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299
+ A+ HA R Y V C G P + + + G I++ DT
Sbjct: 120 EMGVSAIKHA--------RRYTDDVEFSCEDAGRTPIDNLCRMVEAAIKAGARTINIPDT 171
Query: 300 IGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 356
+G P +++ + VP +++ ++VH HD G S+ N + ++QMG ++C++ G
Sbjct: 172 VGYTVPTEFSGIIQTLFNRVPNIDQAIISVHCHDDLGLSVANSIGAVQMGARQIECTING 231
Query: 357 LGGCPYAKGASGNVATEDVVYMLSG----LGVETNV 388
+G +GN + E+V +L LGV TN+
Sbjct: 232 IG------ERAGNCSLEEVAMILKTRADLLGVHTNI 261
>sp|B1KKZ4|LEU1_SHEWM 2-isopropylmalate synthase OS=Shewanella woodyi (strain ATCC 51908
/ MS32) GN=leuA PE=3 SV=1
Length = 523
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 35/303 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+E VS D + V
Sbjct: 5 VIIFDTTLRDGEQALAASLTVKEKLQIALSLERLGVDVMEVGFPVSSP-----GDFKSVE 59
Query: 187 EAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAI--------FASASEAFSKSNINCSIE 238
R ++ +R+ L + E I A A+ +++ F S S +S + S +
Sbjct: 60 TIARTVKNSRVCALA---RALEKDIDAAAQSLSVADQFRIHTFISTSTIHVESKLKRSFD 116
Query: 239 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298
L A+ + V C G P + + +E G I++ D
Sbjct: 117 QVLEMAVGAVKYARRFTDDVE------FSCEDAGRTPIDNLCRMVEEAIKAGAKTINIPD 170
Query: 299 TIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVA 355
T+G P ++E + VP +++ ++VH HD G S+ N + ++Q G ++C+V
Sbjct: 171 TVGYTVPSEFGGIIETLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQQGARQIECTVN 230
Query: 356 GLGGCPYAKGASGNVATEDVVYMLS----GLGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
G+G +GN + E++ +LS LG+ET ++ +++ +++ P +
Sbjct: 231 GIG------ERAGNCSLEEIAMILSTRKAALGLETGINAKEIHRTSSLVSQLCNMPVQAN 284
Query: 412 TAI 414
AI
Sbjct: 285 KAI 287
>sp|Q8ZW35|LEU1_PYRAE Probable 2-isopropylmalate synthase OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=leuA PE=3 SV=1
Length = 364
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 208 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG 267
+AA A + +F + S+ K + + E++L R V AK + +
Sbjct: 65 DAAAEADVDMIHLFIATSDIHLKYKLGITREEALRRIEEVVSYAKSYGVEILFSAEDATR 124
Query: 268 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVH 327
+E K A A G EI++ DT+GV TP + +++ + +P + VH
Sbjct: 125 SDLEFLAKAYKTAIEA------GADEINVPDTVGVMTPSRMAYLIKYLRERLPPIPMHVH 178
Query: 328 LHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG-LGVET 386
HD +G ++ N + +++ G V G +GN A E+VV + LG+ T
Sbjct: 179 CHDDFGMAVANTVTAIENGADVAQVVVNNFG------ERAGNAALEEVVAAVHYLLGLRT 232
Query: 387 NVDLRKLMLAGDFINKHLGRP 407
N+ L KL ++K G P
Sbjct: 233 NIKLEKLYSLSQLVSKLFGVP 253
>sp|Q8TYB1|LEU1_METKA Probable 2-isopropylmalate synthase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=leuA PE=3 SV=1
Length = 499
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 38/283 (13%)
Query: 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADA 182
+P V+I + RDG Q ++ KVE+ R+L G+ +EA V+ +
Sbjct: 1 MPDRVRIFDTTLRDGEQTPGVSLTVEEKVEIARKLDEFGVDTIEAGFPVASEGE------ 54
Query: 183 RDVMEAVRDLEGARLPV----LTPNLKG-FEAAIAAGAKEVAIFASASEAFSKSNINCSI 237
EAVR + G L L +KG +AAI A V +F + S+ + + S
Sbjct: 55 ---FEAVRAIAGEELDAEICGLARCVKGDIDAAIDADVDCVHVFIATSDIHLRYKLEMSR 111
Query: 238 EDSLVRYRAVAHAAKVLSIPVRGYVS---CVVGCPVEGAIPPSK--VAYVAKELHDMGCF 292
E++L R +I Y S V E A + + V K + G
Sbjct: 112 EEALER-----------AIEGVEYASDHGVTVEFSAEDATRTDRDYLLEVYKATVEAGAD 160
Query: 293 EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 352
+++ DT+GV TP + + V+ V V ++VH H+ +G ++ N L +++ G V
Sbjct: 161 RVNVPDTVGVMTPPEMYRLTAEVVDAVDV-PVSVHCHNDFGMAVANSLAAVEAGAEQVHV 219
Query: 353 SVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLML 395
+V G+G +GN + E VV L L + +D+R ML
Sbjct: 220 TVNGIG------ERAGNASLEQVVMALKAL-YDIELDVRTEML 255
>sp|A2SL35|HOA2_METPP 4-hydroxy-2-oxovalerate aldolase 2 OS=Methylibium petroleiphilum
(strain PM1) GN=Mpe_A3321 PE=3 SV=1
Length = 358
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 37/271 (13%)
Query: 135 RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-----SPKWVPQLADARDVMEAV 189
RDG+ ++ +P V++ L ++G+P+++ T S + LA + AV
Sbjct: 24 RDGMHAKREQIPVEQMVKVAMALDAAGVPLIQVTHGAGLGGNSLQHGFALASNEAYLSAV 83
Query: 190 R-DLEGARLPVL-TPNL---KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRY 244
++ A++ VL P L + ++A GA+ V + +C+ D+ ++
Sbjct: 84 APKMKQAKVSVLLIPGLGTMRELQSAYNCGARSVTV-----------ATHCTEADTAPQH 132
Query: 245 RAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGT 304
+A+A K L + G++ + P +A K + D G + + D+ G
Sbjct: 133 --IAYARK-LGMDTVGFLM------MAHLNDPEGLAKQGKLMEDYGAQTVYVTDSAGYML 183
Query: 305 PGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYA 363
P V + A+ AV+ P ++ H H G + N + +++ G S +D SVAGLG
Sbjct: 184 PADVRARVAALRAVLKPETEIGFHGHHNLGMGIANSIAAIEEGASRIDGSVAGLG----- 238
Query: 364 KGASGNVATEDVVYMLSGLGVETNVDLRKLM 394
+GN E + + +G+ET VDL KLM
Sbjct: 239 -AGAGNTPLEVFLAVCDRMGIETGVDLFKLM 268
>sp|A8AB61|LEU1_IGNH4 Probable 2-isopropylmalate synthase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=leuA PE=3
SV=1
Length = 399
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 123/297 (41%), Gaps = 33/297 (11%)
Query: 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRL-------VSSGLPVVEATSFVS 172
L+ +P+ V+I + RDG Q + K+ + R+L + +G P V F +
Sbjct: 13 LENLPKEVRIFDTTLRDGEQTPGISFTKEQKLMIARQLAKLGVASIEAGFPAVSQGEFEA 72
Query: 173 PKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSN 232
K + + +++ R N + + A+ A + +F +AS+ K
Sbjct: 73 VKAIAREGLGPEIVALAR-----------ANKRDIDKALDADVDAIHVFIAASDIHLKYK 121
Query: 233 INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE-LHDMGC 291
+ + E++L R AK + V P +G Y E + D G
Sbjct: 122 LRMTREEALRRAVEAVEYAKSHGVTVEF-------SPEDGTRADLNYLYTMVEAVVDAGA 174
Query: 292 FEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 351
+ + DT+GV TP + +++ ++ ++VH H+ +G ++ N + ++ G
Sbjct: 175 DRVDIPDTVGVMTPTRMKYLIKFILPAAKGRIVSVHCHNDFGLAVANSIAGIEAGARQAH 234
Query: 352 CSVAGLGGCPYAKGASGNVATEDVVYMLSG-LGVETNVDLRKLMLAGDFINKHLGRP 407
+V G+G +GN A E+VV L L V T V+ + L ++K G P
Sbjct: 235 VTVNGIG------ERAGNAALEEVVAALEFLLNVRTGVNTKLLYETSLLVSKITGIP 285
>sp|Q5E856|LEU1_VIBF1 2-isopropylmalate synthase OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=leuA PE=3 SV=1
Length = 515
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 133/308 (43%), Gaps = 45/308 (14%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVEL---IRRL----VSSGLPVVEATSFVSPKWVPQ- 178
V I + RDG Q ++ K+++ + RL + +G PV F S K + Q
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPVSSPGDFESVKTIAQH 64
Query: 179 LADAR--DVMEAV-RDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINC 235
+ ++R + AV +D++ A EA A A + F S S + +
Sbjct: 65 IKNSRICGLSRAVAKDIDAAA-----------EALKVAEAFRIHTFISTSTVHVQDKLRR 113
Query: 236 SIEDSL-VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFE 293
S +D + + +AV HA R Y V C G P + + + D G
Sbjct: 114 SYDDVVEMGVKAVKHA--------RKYTDDVEFSCEDAGRTPIDNLCRMVEAAIDAGANT 165
Query: 294 ISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTV 350
I++ DT+G PG +++ + VP ++K ++VH HD G S+ N + ++Q G V
Sbjct: 166 INIPDTVGYTVPGEFGGIVQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQV 225
Query: 351 DCSVAGLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGR 406
+ ++ G+G +GN + E++ +L LGV TN+ ++ +++
Sbjct: 226 EGTINGIG------ERAGNCSLEEIAMILKTRSEYLGVHTNLKHDEIHRTSKLVSQLCNM 279
Query: 407 PSGSKTAI 414
P S AI
Sbjct: 280 PIQSNKAI 287
>sp|P94565|LEU1_BACSU 2-isopropylmalate synthase OS=Bacillus subtilis (strain 168)
GN=leuA PE=3 SV=1
Length = 518
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 29/293 (9%)
Query: 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARD 184
R + + RDG Q+ + T K+ + ++L G ++EA S + D
Sbjct: 2 RKINFFDTTLRDGEQSPGVNLNTQEKLAIAKQLERLGADIIEAGFPASSR-----GDFLA 56
Query: 185 VMEAVRDLEGARLPVLTPNLKG-----FEAAIAAGAKEVAIFASASEAFSKSNINCSIED 239
V E R ++ + L +KG +EA + +F + S+ K + + E
Sbjct: 57 VQEIARTIKNCSVTGLARCVKGDIDAAWEALKDGAQPRIHVFIATSDIHLKHKLKMTREQ 116
Query: 240 SLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299
+ R + AK P+ + S C E +P +A + +++ D G I+L DT
Sbjct: 117 VIERAVGMVKYAKE-RFPIVQW-SAEDACRTE--LPF--LAEIVEKVIDAGASVINLPDT 170
Query: 300 IGVGTP---GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 356
+G P G + ++ + + KL+ H HD G ++ N L +++ G ++C+V G
Sbjct: 171 VGYLAPAEYGNIFKYMKENVPNIHKAKLSAHCHDDLGMAVANSLAAIENGADQIECAVNG 230
Query: 357 LGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLG 405
+G +GN A E++ L VET + L ++ D ++K G
Sbjct: 231 IG------ERAGNAALEEIAVALHTRKDFYQVETGITLNEIKRTSDLVSKLTG 277
>sp|C4LAV7|LEU1_TOLAT 2-isopropylmalate synthase OS=Tolumonas auensis (strain DSM 9187 /
TA4) GN=leuA PE=3 SV=1
Length = 521
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 31/301 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+E VS D V
Sbjct: 5 VIIFDTTLRDGEQALPASLTVREKLQIALALERLGVDVMEVGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
R ++ +R+ L+ L+ EA A + F + S +S + S ED L
Sbjct: 60 TIARQIKNSRVCALSRALQKDIDAAAEALKVADQFRIHTFLATSTIHVESKLKKSFEDVL 119
Query: 242 -VRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI 300
+ AV +A + C G P + + + + G I++ DT+
Sbjct: 120 EMGINAVKYARRFTD-------DVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPDTV 172
Query: 301 GVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 357
G P ++ + VP ++K ++VH HD G S+ N + ++QMG V+C++ G+
Sbjct: 173 GYTIPSEFGGIIHNLFNRVPNIDKAVISVHCHDDLGLSVANSISAVQMGARQVECTINGI 232
Query: 358 GGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSKTA 413
G +GN + E+V +L +GV TN+ +++ +++ P A
Sbjct: 233 G------ERAGNTSLEEVAMILRTRQDLIGVHTNIKHQEIHRTSQLVSQLCNMPVQPNKA 286
Query: 414 I 414
I
Sbjct: 287 I 287
>sp|Q0HZT4|LEU1_SHESR 2-isopropylmalate synthase OS=Shewanella sp. (strain MR-7) GN=leuA
PE=3 SV=1
Length = 522
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 35/303 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+E VS D V
Sbjct: 5 VIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAI--------FASASEAFSKSNINCSIE 238
R ++ +R+ L+ + E I A A+ +++ F S S +S + S E
Sbjct: 60 TIARTIKNSRVCALS---RALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFE 116
Query: 239 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298
L A+ + V C G P + + + G I++ D
Sbjct: 117 QVLEMAVGAVKYARRFTDDVE------FSCEDAGRTPIDNLCRMVEAAIHAGARTINIPD 170
Query: 299 TIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVA 355
T+G P +++ + VP +++ ++VH HD G S+ N + ++Q G ++C++
Sbjct: 171 TVGYTVPSEFGGIIQTLFNRVPNIDQAIISVHCHDDLGMSVANSITAVQHGARQIECTMN 230
Query: 356 GLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
G+G +GN + E++ +L+ LGVET ++ +++ + +++ P S
Sbjct: 231 GIG------ERAGNCSLEEIAMILATRKNLLGVETGINAKEIHRTSNLVSQLCNMPIQSN 284
Query: 412 TAI 414
AI
Sbjct: 285 KAI 287
>sp|A0L1R0|LEU1_SHESA 2-isopropylmalate synthase OS=Shewanella sp. (strain ANA-3) GN=leuA
PE=3 SV=1
Length = 522
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 35/303 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+E VS D V
Sbjct: 5 VIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAI--------FASASEAFSKSNINCSIE 238
R ++ +R+ L+ + E I A A+ +++ F S S +S + S E
Sbjct: 60 TIARTIKNSRVCALS---RALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFE 116
Query: 239 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298
L A+ + V C G P + + + G I++ D
Sbjct: 117 QVLEMAVGAVKYARRFTDDVE------FSCEDAGRTPIDNLCRMVEAAIHAGARTINIPD 170
Query: 299 TIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVA 355
T+G P +++ + VP +++ ++VH HD G S+ N + ++Q G ++C++
Sbjct: 171 TVGYTVPSEFGGIIQTLFNRVPNIDQAIISVHCHDDLGMSVANSITAVQHGARQIECTMN 230
Query: 356 GLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
G+G +GN + E++ +L+ LGVET ++ +++ + +++ P S
Sbjct: 231 GIG------ERAGNCSLEEIAMILATRKNLLGVETGINAKEIHRTSNLVSQLCNMPIQSN 284
Query: 412 TAI 414
AI
Sbjct: 285 KAI 287
>sp|Q7MP77|LEU1_VIBVY 2-isopropylmalate synthase OS=Vibrio vulnificus (strain YJ016)
GN=leuA PE=3 SV=1
Length = 515
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 129/302 (42%), Gaps = 33/302 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+EA VS D V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
R+++ +R+ L+ ++ EA A A + F S S + + S +D +
Sbjct: 60 TIARNIKNSRVCALSRAVEKDIDAAAEALKVAEAFRIHTFISTSTIHVQDKLRRSYDDVV 119
Query: 242 -VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299
+ RAV HA R Y V C G P + + + + G I++ DT
Sbjct: 120 EMGVRAVKHA--------RKYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPDT 171
Query: 300 IGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 356
+G P +++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ G
Sbjct: 172 VGYTVPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVEGTING 231
Query: 357 LGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSKT 412
+G +GN + E++ ++ LGV T ++ ++ +++ P +
Sbjct: 232 IG------ERAGNCSLEEIAMIIKTRQELLGVRTGINHEEIHRTSKLVSQLCNMPIQANK 285
Query: 413 AI 414
AI
Sbjct: 286 AI 287
>sp|Q8DEE1|LEU1_VIBVU 2-isopropylmalate synthase OS=Vibrio vulnificus (strain CMCP6)
GN=leuA PE=3 SV=1
Length = 515
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 129/302 (42%), Gaps = 33/302 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+EA VS D V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
R+++ +R+ L+ ++ EA A A + F S S + + S +D +
Sbjct: 60 TIARNIKNSRVCALSRAVEKDIDAAAEALKVAEAFRIHTFISTSTIHVQDKLRRSYDDVV 119
Query: 242 -VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299
+ RAV HA R Y V C G P + + + + G I++ DT
Sbjct: 120 EMGVRAVKHA--------RKYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPDT 171
Query: 300 IGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 356
+G P +++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ G
Sbjct: 172 VGYTVPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVEGTING 231
Query: 357 LGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSKT 412
+G +GN + E++ ++ LGV T ++ ++ +++ P +
Sbjct: 232 IG------ERAGNCSLEEIAMIIKTRQELLGVRTGINHEEIHRTSKLVSQLCNMPIQANK 285
Query: 413 AI 414
AI
Sbjct: 286 AI 287
>sp|Q0HE65|LEU1_SHESM 2-isopropylmalate synthase OS=Shewanella sp. (strain MR-4) GN=leuA
PE=3 SV=1
Length = 522
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 35/303 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+E VS D V
Sbjct: 5 VIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAI--------FASASEAFSKSNINCSIE 238
R ++ +R+ L+ + E I A A+ +++ F S S +S + S E
Sbjct: 60 TIARTIKNSRVCALS---RALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFE 116
Query: 239 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298
L A+ + V C G P + + + G I++ D
Sbjct: 117 QVLEMAVGAVKYARRFTDDVE------FSCEDAGRTPIDNLCRMVEAAIHAGARTINIPD 170
Query: 299 TIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVA 355
T+G P +++ + VP +++ ++VH HD G S+ N + ++Q G ++C++
Sbjct: 171 TVGYTVPSEFGGIIQTLFNRVPNIDQAIISVHCHDDLGMSVANSITAVQHGARQIECTMN 230
Query: 356 GLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
G+G +GN + E++ +L+ LGVET ++ +++ + +++ P S
Sbjct: 231 GIG------ERAGNCSLEEIAMILATRKNLLGVETGINAKEIHRTSNLVSQLCNMPIQSN 284
Query: 412 TAI 414
AI
Sbjct: 285 KAI 287
>sp|A8FQ83|LEU1_SHESH 2-isopropylmalate synthase OS=Shewanella sediminis (strain HAW-EB3)
GN=leuA PE=3 SV=1
Length = 523
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 268 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--L 324
C G P + + +E G I++ DT+G P ++E + VP +++ +
Sbjct: 140 CEDAGRTPIDNLCRMVEEAIKAGARTINIPDTVGYTIPSEFGGIIETLFNRVPNIDQAII 199
Query: 325 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLS---- 380
+VH HD G S+ N + ++Q G ++C+V G+G +GN + E++ +LS
Sbjct: 200 SVHCHDDLGLSVANSITAVQQGARQIECTVNGIG------ERAGNCSLEEIAMILSTRKD 253
Query: 381 GLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 414
LG+ET ++ +++ + +++ P + AI
Sbjct: 254 SLGLETGINAKEIHRTSNLVSQLCNMPVQANKAI 287
>sp|Q9RUA9|LEU1_DEIRA 2-isopropylmalate synthase OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=leuA PE=3 SV=1
Length = 522
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 126/306 (41%), Gaps = 39/306 (12%)
Query: 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEA-TSFVSPKWVPQLADAR 183
+ ++I + RDG Q+ + K+E+ L G+ V+EA SP D
Sbjct: 14 QHIRIFDTTLRDGEQSPGVALNHAQKLEIAHTLARMGVDVIEAGFPIASP------GDLE 67
Query: 184 DVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVR 243
V R++ G PV+T + A I A AK V EA KS I+ I S +
Sbjct: 68 GVSRIAREVRG---PVITALARANRADIEAAAKGV-------EAAEKSRIHTFIATSPIH 117
Query: 244 YR---------AVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP-SKVAYVAKELHDMGCFE 293
+ + A + + + R YV V + ++ + K + G
Sbjct: 118 MQKKLNLEPDAVIERAVEAVRL-ARQYVDDVEFSAEDATRSEWDFLSRIFKAAVEAGATT 176
Query: 294 ISLGDTIGVGTPGTVVPMLEAVMAVVPVEK-LAVHLHDTYGQSLPNILISLQMGISTVDC 352
I++ DT+G TP + + + A +P L+ H HD G ++ N + + + G ++C
Sbjct: 177 INVPDTVGYTTPEEMRKLFAYLKAKLPAHVILSSHCHDDLGMAVANSIAAAEGGARQIEC 236
Query: 353 SVAGLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPS 408
++ G+G +GN + E++V G ET + R+L A +++ G P
Sbjct: 237 TINGIG------ERAGNASLEEIVMAFHTRRDVYGYETGIRTRELYRASRLVSRLSGMPV 290
Query: 409 GSKTAI 414
AI
Sbjct: 291 QPNKAI 296
>sp|A7Z7B8|LEU1_BACA2 2-isopropylmalate synthase OS=Bacillus amyloliquefaciens (strain
FZB42) GN=leuA PE=3 SV=1
Length = 518
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 132/294 (44%), Gaps = 31/294 (10%)
Query: 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARD 184
R + + + RDG Q+ + + K+ + ++L G+ ++EA S + D
Sbjct: 2 RKINVFDTTLRDGEQSPGVNLNSREKLAIAKQLERLGVDIIEAGFPASSR-----GDFLA 56
Query: 185 VMEAVRDLEGARLPVLTPNLKG-----FEAAIAAGAKEVAIFASASEAFSKSNINCSIED 239
V E R ++ + L ++KG +EA + + IF + S+ K + + E+
Sbjct: 57 VQEIARTIKNCSVTGLARSVKGDIDAAWEALKDGVSPRIHIFIATSDIHLKHKLKMTREE 116
Query: 240 SLVRYRAVAHAAKVLS-IPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298
V+ +AV P+ + S C E +P +A + +E+ D G I+L D
Sbjct: 117 --VKEKAVEMVKYAKERFPIVQW-SAEDACRTE--LPF--LAEIVEEVIDAGASVINLPD 169
Query: 299 TIGVGTP---GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVA 355
T+G TP G + ++ + + KL+ H HD G ++ N L +++ G ++C++
Sbjct: 170 TVGYLTPDEYGNIFKYMKEHVPNISRVKLSAHCHDDLGMAVANSLSAIENGADQIECAIN 229
Query: 356 GLGGCPYAKGASGNVATEDVVYML----SGLGVETNVDLRKLMLAGDFINKHLG 405
G+G +GN A E++ L +++++L +L D ++K G
Sbjct: 230 GIG------ERAGNAALEEIAVALHVRNDAHQADSSLNLHELKRTSDLVSKLTG 277
>sp|B8CM39|LEU1_SHEPW 2-isopropylmalate synthase OS=Shewanella piezotolerans (strain WP3
/ JCM 13877) GN=leuA PE=3 SV=1
Length = 523
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 35/303 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+E VS D V
Sbjct: 5 VIIFDTTLRDGEQALAASLTVKEKLQIALALERLGVDVMEVGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAI--------FASASEAFSKSNINCSIE 238
R ++ +R+ L+ + E I A A+ +++ F S S +S + S +
Sbjct: 60 TIARTVKNSRVCALS---RALEKDIDAAAQALSVADQFRIHTFISTSTIHVESKLKRSFD 116
Query: 239 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298
L A+ + V C G P + + +E G I++ D
Sbjct: 117 QVLEMAVGAVKYARRFTDDVE------FSCEDAGRTPIDNLCRMVEEAIKAGARTINIPD 170
Query: 299 TIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVA 355
T+G P +++ + VP +++ ++VH HD G S+ N + ++Q G ++C+V
Sbjct: 171 TVGYTVPSEFGGIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIECTVN 230
Query: 356 GLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
G+G +GN + E++ +LS LG+ET ++ +++ +++ P +
Sbjct: 231 GIG------ERAGNCSLEEIAMILSTRKGELGLETGINAKEIHRTSSLVSQLCNMPVQAN 284
Query: 412 TAI 414
AI
Sbjct: 285 KAI 287
>sp|A1JJH7|LEU1_YERE8 2-isopropylmalate synthase OS=Yersinia enterocolitica serotype O:8
/ biotype 1B (strain 8081) GN=leuA PE=3 SV=1
Length = 520
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 31/313 (9%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q + ++ K+++ L G+ V+E VS D V
Sbjct: 5 VIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVMEVGFPVSSP-----GDFESVR 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
+ ++ +R+ L + EA A A + +F + S +S + S +D L
Sbjct: 60 TIAQQMKNSRVCALARCVDKDIDVAAEALRIAEAFRIHVFLATSTLHIESKLKRSFDDVL 119
Query: 242 VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI 300
H+ K R Y V C G P + + + + G I++ DT+
Sbjct: 120 A---MAVHSVK----RARNYTDDVEFSCEDAGRTPIDNLCRIVEAAINAGATTINIPDTV 172
Query: 301 GVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 357
G TP ++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ GL
Sbjct: 173 GYTTPYQFGGIITDLYQRVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVEGTINGL 232
Query: 358 GGCPYAKGASGNVATEDVVYML----SGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTA 413
G +GN + E+V+ + + LGV TN++ +++ ++K P + A
Sbjct: 233 G------ERAGNCSLEEVIMAIKVRENMLGVHTNINHQEIYRTSQLVSKLCNMPIPANKA 286
Query: 414 IALNRIAADASKI 426
I + A +S I
Sbjct: 287 IVGSNAFAHSSGI 299
>sp|Q9FN52|MAM3_ARATH Methylthioalkylmalate synthase 3, chloroplastic OS=Arabidopsis
thaliana GN=MAM3 PE=1 SV=1
Length = 503
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 117/304 (38%), Gaps = 41/304 (13%)
Query: 126 FVKIVEVGPRDGLQNEKNTVPTGVKVELIRRL-------VSSGLPVVEATSFVSPKWVPQ 178
+V++++ RDG Q+ + K+E+ R+L + G PV F + K +
Sbjct: 84 YVRVLDTTLRDGEQSPGAALTPPQKLEIARQLAKLRVDIMEVGFPVSSEEEFEAIKTI-- 141
Query: 179 LADARDVMEAVRDLEGARLPVLTPNLK--------GFEAAIAAGAKEVAIFASASEAFSK 230
A+ V V D E +PV+ + +EA A V +F S SE K
Sbjct: 142 ---AKTVGNEV-DEETGYVPVICGIARCKKRDIEATWEALKYAKRPRVMLFTSTSEIHMK 197
Query: 231 SNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG 290
+ + E+ + AK L G+ GC G + + E G
Sbjct: 198 YKLKKTKEEVIEMAVNSVKYAKSL-----GFKDIQFGCEDGGRTEKDFICKILGESIKAG 252
Query: 291 CFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEK---LAVHLHDTYGQSLPNILISLQMGI 347
+ DT+G+ P ++ V+ P A+H H+ G + N + + G
Sbjct: 253 ATTVGFADTVGINMPQEFGELVAYVIENTPGADDIVFAIHCHNDLGVATANTISGICAGA 312
Query: 348 STVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGL------GVETNVDLRKLMLAGDFIN 401
V+ ++ G+G SGN E+VV L GV T +D R++M +
Sbjct: 313 RQVEVTINGIG------ERSGNAPLEEVVMALKCRGESLMDGVYTKIDSRQIMATSKMVQ 366
Query: 402 KHLG 405
+H G
Sbjct: 367 EHTG 370
>sp|B5FGH4|LEU1_VIBFM 2-isopropylmalate synthase OS=Vibrio fischeri (strain MJ11) GN=leuA
PE=3 SV=1
Length = 515
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 33/302 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+EA VS D V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPVSSP-----GDFESVR 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
+ ++ +R+ L+ + EA A A + F S S + + S +D +
Sbjct: 60 TIAQHIKNSRICGLSRAVAKDIDAAAEALKVAEAFRIHTFISTSTVHVQDKLRRSYDDVV 119
Query: 242 -VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299
+ +AV HA R Y V C G P + + + + G I++ DT
Sbjct: 120 EMGVKAVKHA--------RKYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGANTINIPDT 171
Query: 300 IGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 356
+G PG +++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ G
Sbjct: 172 VGYTVPGEFGGIVQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVEGTING 231
Query: 357 LGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSKT 412
+G +GN + E++ +L LGV TN+ ++ +++ P S
Sbjct: 232 IG------ERAGNCSLEEIAMILKTRSEYLGVHTNLKHDEIHRTSKLVSQLCNMPIQSNK 285
Query: 413 AI 414
AI
Sbjct: 286 AI 287
>sp|B0TQM0|LEU1_SHEHH 2-isopropylmalate synthase OS=Shewanella halifaxensis (strain
HAW-EB4) GN=leuA PE=3 SV=1
Length = 523
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 133/303 (43%), Gaps = 35/303 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+E VS D V
Sbjct: 5 VIIFDTTLRDGEQALAASLTVKEKLQIALALERLGVDVMEVGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAF------SKSNINCSIEDS 240
+ ++ +R+ L+ + E+ I A A+ +++ +E F S S I+ +E+
Sbjct: 60 TIAKTIKNSRVCALS---RALESDIDAAAQALSV----AEQFRIHTFISTSTIH--VENK 110
Query: 241 LVRY--RAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298
L R + + A + R C G P + + +E G I++ D
Sbjct: 111 LKRSFDQVLDMAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEEAIKAGARTINIPD 170
Query: 299 TIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVA 355
T+G P +++ + VP +++ ++VH HD G S+ N + ++Q G ++C+V
Sbjct: 171 TVGYTVPSEFGGIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIECTVN 230
Query: 356 GLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
G+G +GN + E++ +LS LG+ET ++ +++ +++ P +
Sbjct: 231 GIG------ERAGNCSLEEIAMILSTRKGELGLETGINAKEIHRTSSLVSQLCNMPVQAN 284
Query: 412 TAI 414
AI
Sbjct: 285 KAI 287
>sp|Q8E9N2|LEU1_SHEON 2-isopropylmalate synthase OS=Shewanella oneidensis (strain MR-1)
GN=leuA PE=3 SV=1
Length = 522
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 127/303 (41%), Gaps = 35/303 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+E VS D V
Sbjct: 5 VIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAI--------FASASEAFSKSNINCSIE 238
R ++ +R+ L+ + E I A A+ +++ F S S +S + S E
Sbjct: 60 TIARTIKNSRVCALS---RALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFE 116
Query: 239 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298
L A+ + V C G P + + + G I++ D
Sbjct: 117 QVLEMAVGAVKYARRFTDDVE------FSCEDAGRTPIDNLCRMVEAAIHAGARTINIPD 170
Query: 299 TIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVA 355
T+G P +++ + VP +++ ++VH HD G S+ N + ++Q G ++C++
Sbjct: 171 TVGYTVPSEFGSIIQTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMN 230
Query: 356 GLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
G+G +GN + E++ +L+ LG ET ++ +++ + +++ P S
Sbjct: 231 GIG------ERAGNCSLEEIAMILATRKNLLGFETGINAKEIHRTSNLVSQLCNMPIQSN 284
Query: 412 TAI 414
AI
Sbjct: 285 KAI 287
>sp|A8H9A1|LEU1_SHEPA 2-isopropylmalate synthase OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=leuA PE=3 SV=1
Length = 523
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 128/303 (42%), Gaps = 35/303 (11%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q ++ K+++ L G+ V+E VS D V
Sbjct: 5 VIIFDTTLRDGEQALAASLTVKEKLQIALALERLGVDVMEVGFPVSSP-----GDFESVQ 59
Query: 187 EAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAI--------FASASEAFSKSNINCSIE 238
+ ++ +R+ L+ + E I A A+ +++ F S S +S + S +
Sbjct: 60 TIAKTIKNSRVCALS---RALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFD 116
Query: 239 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298
L A+ + V C G P + + +E G I++ D
Sbjct: 117 QVLEMAVGAVKYARRFTDDVE------FSCEDAGRTPIDNLCRMVEEAIKAGARTINIPD 170
Query: 299 TIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVA 355
T+G P +++ + VP +++ ++VH HD G S+ N + ++Q G ++C+V
Sbjct: 171 TVGYTVPSEFGGIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIECTVN 230
Query: 356 GLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRPSGSK 411
G+G +GN + E++ +LS LG+ET ++ +++ +++ P +
Sbjct: 231 GIG------ERAGNCSLEEIAMILSTRKGELGLETGINAKEIHRTSSLVSQLCNMPVQAN 284
Query: 412 TAI 414
AI
Sbjct: 285 KAI 287
>sp|B1JK98|LEU1_YERPY 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 32/308 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q + ++ K+++ L G+ ++E VS D V
Sbjct: 5 VIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDIMEVGFPVSSP-----GDFESVR 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
+ ++ +R+ L + EA A A + +F + S +S + S +D L
Sbjct: 60 TIAQQVKNSRVCALARCVDKDIDVAAEALRIAEAFRIHVFLATSTLHIESKLKRSFDDVL 119
Query: 242 VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI 300
H+ K R Y V C G P + V + G I++ DT+
Sbjct: 120 A---MAVHSVK----RARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTINIPDTV 172
Query: 301 GVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 357
G TP ++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ GL
Sbjct: 173 GYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVEGTINGL 232
Query: 358 GGCPYAKGASGNVATEDVVYML----SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKT 412
G +GN + E+V+ + LGV TN++ +++ ++K P G+K
Sbjct: 233 G------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKA 286
Query: 413 AIALNRIA 420
+ N A
Sbjct: 287 IVGSNAFA 294
>sp|Q66EM1|LEU1_YERPS 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
I (strain IP32953) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 32/308 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q + ++ K+++ L G+ ++E VS D V
Sbjct: 5 VIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDIMEVGFPVSSP-----GDFESVR 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
+ ++ +R+ L + EA A A + +F + S +S + S +D L
Sbjct: 60 TIAQQVKNSRVCALARCVDKDIDVAAEALRIAEAFRIHVFLATSTLHIESKLKRSFDDVL 119
Query: 242 VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI 300
H+ K R Y V C G P + V + G I++ DT+
Sbjct: 120 A---MAVHSVK----RARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTINIPDTV 172
Query: 301 GVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 357
G TP ++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ GL
Sbjct: 173 GYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVEGTINGL 232
Query: 358 GGCPYAKGASGNVATEDVVYML----SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKT 412
G +GN + E+V+ + LGV TN++ +++ ++K P G+K
Sbjct: 233 G------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKA 286
Query: 413 AIALNRIA 420
+ N A
Sbjct: 287 IVGSNAFA 294
>sp|A4TQA2|LEU1_YERPP 2-isopropylmalate synthase OS=Yersinia pestis (strain Pestoides F)
GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 32/308 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q + ++ K+++ L G+ ++E VS D V
Sbjct: 5 VIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDIMEVGFPVSSP-----GDFESVR 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
+ ++ +R+ L + EA A A + +F + S +S + S +D L
Sbjct: 60 TIAQQVKNSRVCALARCVDKDIDVAAEALRIAEAFRIHVFLATSTLHIESKLKRSFDDVL 119
Query: 242 VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI 300
H+ K R Y V C G P + V + G I++ DT+
Sbjct: 120 A---MAVHSVK----RARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTINIPDTV 172
Query: 301 GVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 357
G TP ++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ GL
Sbjct: 173 GYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVEGTINGL 232
Query: 358 GGCPYAKGASGNVATEDVVYML----SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKT 412
G +GN + E+V+ + LGV TN++ +++ ++K P G+K
Sbjct: 233 G------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKA 286
Query: 413 AIALNRIA 420
+ N A
Sbjct: 287 IVGSNAFA 294
>sp|Q1CMP5|LEU1_YERPN 2-isopropylmalate synthase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 32/308 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q + ++ K+++ L G+ ++E VS D V
Sbjct: 5 VIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDIMEVGFPVSSP-----GDFESVR 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
+ ++ +R+ L + EA A A + +F + S +S + S +D L
Sbjct: 60 TIAQQVKNSRVCALARCVDKDIDVAAEALRIAEAFRIHVFLATSTLHIESKLKRSFDDVL 119
Query: 242 VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI 300
H+ K R Y V C G P + V + G I++ DT+
Sbjct: 120 A---MAVHSVK----RARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTINIPDTV 172
Query: 301 GVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 357
G TP ++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ GL
Sbjct: 173 GYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVEGTINGL 232
Query: 358 GGCPYAKGASGNVATEDVVYML----SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKT 412
G +GN + E+V+ + LGV TN++ +++ ++K P G+K
Sbjct: 233 G------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKA 286
Query: 413 AIALNRIA 420
+ N A
Sbjct: 287 IVGSNAFA 294
>sp|A9R142|LEU1_YERPG 2-isopropylmalate synthase OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 32/308 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q + ++ K+++ L G+ ++E VS D V
Sbjct: 5 VIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDIMEVGFPVSSP-----GDFESVR 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
+ ++ +R+ L + EA A A + +F + S +S + S +D L
Sbjct: 60 TIAQQVKNSRVCALARCVDKDIDVAAEALRIAEAFRIHVFLATSTLHIESKLKRSFDDVL 119
Query: 242 VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI 300
H+ K R Y V C G P + V + G I++ DT+
Sbjct: 120 A---MAVHSVK----RARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTINIPDTV 172
Query: 301 GVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 357
G TP ++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ GL
Sbjct: 173 GYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVEGTINGL 232
Query: 358 GGCPYAKGASGNVATEDVVYML----SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKT 412
G +GN + E+V+ + LGV TN++ +++ ++K P G+K
Sbjct: 233 G------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKA 286
Query: 413 AIALNRIA 420
+ N A
Sbjct: 287 IVGSNAFA 294
>sp|Q8ZIG8|LEU1_YERPE 2-isopropylmalate synthase OS=Yersinia pestis GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 32/308 (10%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
V I + RDG Q + ++ K+++ L G+ ++E VS D V
Sbjct: 5 VIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDIMEVGFPVSSP-----GDFESVR 59
Query: 187 EAVRDLEGARLPVLTPNLK-----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL 241
+ ++ +R+ L + EA A A + +F + S +S + S +D L
Sbjct: 60 TIAQQVKNSRVCALARCVDKDIDVAAEALRIAEAFRIHVFLATSTLHIESKLKRSFDDVL 119
Query: 242 VRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI 300
H+ K R Y V C G P + V + G I++ DT+
Sbjct: 120 A---MAVHSVK----RARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTINIPDTV 172
Query: 301 GVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 357
G TP ++ + VP ++K ++VH HD G S+ N + ++Q G V+ ++ GL
Sbjct: 173 GYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVEGTINGL 232
Query: 358 GGCPYAKGASGNVATEDVVYML----SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKT 412
G +GN + E+V+ + LGV TN++ +++ ++K P G+K
Sbjct: 233 G------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKA 286
Query: 413 AIALNRIA 420
+ N A
Sbjct: 287 IVGSNAFA 294
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,930,880
Number of Sequences: 539616
Number of extensions: 6719488
Number of successful extensions: 17969
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 460
Number of HSP's that attempted gapping in prelim test: 17482
Number of HSP's gapped (non-prelim): 677
length of query: 426
length of database: 191,569,459
effective HSP length: 120
effective length of query: 306
effective length of database: 126,815,539
effective search space: 38805554934
effective search space used: 38805554934
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)