BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014372
(426 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 98 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 149
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 202
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 203 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 246
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 247 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 306
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 307 SYKQVKQLKYVGMVLNEALRLWPTSPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 359
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 360 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 395
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 396 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 98 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 149
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 202
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 203 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 246
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 247 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 306
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 307 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 359
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 360 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 395
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 396 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 191/393 (48%), Gaps = 74/393 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQ-PPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFL 301
+++ +K+L+Y+ +++ E+LRL+P PP + K D + GG YP+ G ++ +
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPPFSL--YAKEDTVLGG------EYPLEKGDELMV 356
Query: 302 SIYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFL 360
I LHR W D EF PERF P + +AF
Sbjct: 357 LIPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFK 392
Query: 361 GFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 357
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 358 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 393
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 394 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 185/391 (47%), Gaps = 70/391 (17%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 101 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 152
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 153 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRTNPDDPAYD------- 205
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETD---VEKLQSRDYSNLKDASLLRFLVDM 183
+R+FQ D+K++ND +D +I + K + +++D L +D
Sbjct: 206 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPET------------- 251
Query: 184 RGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPT 243
G +DD +R ++T LIAGHETT+ +L++ ++ L +NP ++KA E VL P+
Sbjct: 252 -GEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDPVPS 310
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSI 303
++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G +I + I
Sbjct: 311 YKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDEIMVLI 363
Query: 304 YNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGF 362
LHR W D EF PERF P + +AF F
Sbjct: 364 PQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKPF 399
Query: 363 GGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
G G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 400 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 98 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 149
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 202
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 203 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 246
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 247 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 306
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 307 SYKQVKQLKYVGMVLNEALRLWPTVPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 359
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 360 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 395
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 396 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
+G G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 YGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE+T+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 357
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 358 IPQLHRDKTIWGDDVEEFRPERFENPSA------------------------IPQHAFKP 393
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 394 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE+T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE+T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 357
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 358 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 393
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C G QFA+ E+T+ L M+L+ FD E
Sbjct: 394 FGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
+G G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 WGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
W + ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLSGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 357
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 358 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 393
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 394 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
G G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 HGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T L AGHE T+ +L++A++ L +NP +++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
G G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 AGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 187/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T L AGHE T+ +L++A++ L +NP +++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+ + +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 305 SHKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 357
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 358 IPQLHRDKTVWGDDVEEFRPERFENP------------------------SAIPQHAFKP 393
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 394 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 184/391 (47%), Gaps = 70/391 (17%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ R ++ P ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKARNILLPRLSQQAMKGYHAMMVDIAVQLVQKWERLNSDE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY S ++ P I ++ L E + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETD---VEKLQSRDYSNLKDASLLRFLVDM 183
+R+FQ D+K++ND +D +I + K + +++D L +D
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPET------------- 246
Query: 184 RGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPT 243
G +DD +R ++T LIAGHETT+ +LT+A++ L +NP ++KA E VL P+
Sbjct: 247 -GEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPS 305
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSI 303
++ +K+L+Y+ +++ E+LR++P P K D + GG YP+ G ++ + I
Sbjct: 306 YKQVKQLKYVGMVLNEALRIWPTAPAF-SLYAKEDTMLGG------EYPLEKGDELMVLI 358
Query: 304 YNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGF 362
LHR W D EF PERF P + +AF F
Sbjct: 359 PQLHRDKTVWGDDVEEFRPERFENP------------------------SAIPQHAFKPF 394
Query: 363 GGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
G G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 395 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 187/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T L AGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTGPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 187/392 (47%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T L AGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTGPAF-SLYAKEDTVLGG------EYPLEKGDELMVL 357
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 358 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 393
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 394 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 184/392 (46%), Gaps = 72/392 (18%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------YIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP------VIKAVYGTLFEAEHRSTFYIPYWKIPLARW 125
L LD IGL FNY F S ++ P +I+A+ + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFIISMIRAL-DEVMNKLQRANPDDPAYD------ 199
Query: 126 IVPRQRKFQNDLKIINDCLDGLIRNAKETRQETD---VEKLQSRDYSNLKDASLLRFLVD 182
+R+FQ D+K++ND +D +I + K + +++D + L +D
Sbjct: 200 --ENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPET------------ 245
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD + ++T LIAGHETT+ +L++A++ L +NP ++K E VL P
Sbjct: 246 --GEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
+++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G ++ +
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGG------EYPLEKGDEVMVL 356
Query: 303 IYNLHRSPYFW-DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
I LHR W D EF PERF P + +AF
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERFENP------------------------SAIPQHAFKP 392
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
FG G R C+G QFA+ E+T+ L M+L+ FD E
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 203/438 (46%), Gaps = 71/438 (16%)
Query: 1 MGKGLIPADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGN 60
M + A+ + WK+ R +++P F + L+ MV + A + + + E E +
Sbjct: 92 MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR--EAETGK--- 146
Query: 61 SIELDLEAEFSSLALDIIGLGVFNYDFGSVTK-ESPVIKAVYGTLFEAEHRSTFYIPYW- 118
+ L+ F + ++D+I F + S+ + P ++ L R F P++
Sbjct: 147 --PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFFL 199
Query: 119 KIPLARWIVPRQRKFQNDLKIINDCL-----DGLIRNAKETRQETDVEKLQSRDYSNLKD 173
I + +++P L+++N C+ +R + + +E+ +E Q
Sbjct: 200 SITVFPFLIPI-------LEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR------ 246
Query: 174 ASLLRFLVDMRGAD-------VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKV 226
L+ ++D + + + D +L + + AG+ETT++VL++ ++ LA +P
Sbjct: 247 VDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQ 306
Query: 227 KKAQAEVDSVLGQKKP-TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYR 285
+K Q E+D+VL K P T++++ ++EY+ ++V E+LRL+P + + R K DV
Sbjct: 307 QKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDV------ 359
Query: 286 GDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSP 345
+ +G +P G + + Y LHR P +W P +F PERF K KD DP
Sbjct: 360 -EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-------NIDP---- 407
Query: 346 GALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE-LKGSPESVELV 404
Y + FG GPR C+G +FA+M + L +LQ F + K + ++L
Sbjct: 408 -----------YIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLS 456
Query: 405 TGATIHTKNGLWCKLRER 422
G + + + K+ R
Sbjct: 457 LGGLLQPEKPVVLKVESR 474
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 203/438 (46%), Gaps = 71/438 (16%)
Query: 1 MGKGLIPADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGN 60
M + A+ + WK+ R +++P F + L+ MV + A + + + E E +
Sbjct: 93 MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR--EAETGK--- 147
Query: 61 SIELDLEAEFSSLALDIIGLGVFNYDFGSVTK-ESPVIKAVYGTLFEAEHRSTFYIPYW- 118
+ L+ F + ++D+I F + S+ + P ++ L R F P++
Sbjct: 148 --PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFFL 200
Query: 119 KIPLARWIVPRQRKFQNDLKIINDCL-----DGLIRNAKETRQETDVEKLQSRDYSNLKD 173
I + +++P L+++N C+ +R + + +E+ +E Q
Sbjct: 201 SITVFPFLIPI-------LEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR------ 247
Query: 174 ASLLRFLVDMRGAD-------VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKV 226
L+ ++D + + + D +L + + AG+ETT++VL++ ++ LA +P
Sbjct: 248 VDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQ 307
Query: 227 KKAQAEVDSVLGQKKP-TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYR 285
+K Q E+D+VL K P T++++ ++EY+ ++V E+LRL+P + + R K DV
Sbjct: 308 QKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDV------ 360
Query: 286 GDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSP 345
+ +G +P G + + Y LHR P +W P +F PERF K KD DP
Sbjct: 361 -EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-------NIDP---- 408
Query: 346 GALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE-LKGSPESVELV 404
Y + FG GPR C+G +FA+M + L +LQ F + K + ++L
Sbjct: 409 -----------YIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLS 457
Query: 405 TGATIHTKNGLWCKLRER 422
G + + + K+ R
Sbjct: 458 LGGLLQPEKPVVLKVESR 475
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 203/438 (46%), Gaps = 71/438 (16%)
Query: 1 MGKGLIPADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGN 60
M + A+ + WK+ R +++P F + L+ MV + A + + + E E +
Sbjct: 94 MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR--EAETGK--- 148
Query: 61 SIELDLEAEFSSLALDIIGLGVFNYDFGSVTK-ESPVIKAVYGTLFEAEHRSTFYIPYW- 118
+ L+ F + ++D+I F + S+ + P ++ L R F P++
Sbjct: 149 --PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFFL 201
Query: 119 KIPLARWIVPRQRKFQNDLKIINDCL-----DGLIRNAKETRQETDVEKLQSRDYSNLKD 173
I + +++P L+++N C+ +R + + +E+ +E Q
Sbjct: 202 SITVFPFLIPI-------LEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR------ 248
Query: 174 ASLLRFLVDMRGAD-------VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKV 226
L+ ++D + + + D +L + + AG+ETT++VL++ ++ LA +P
Sbjct: 249 VDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQ 308
Query: 227 KKAQAEVDSVLGQKKP-TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYR 285
+K Q E+D+VL K P T++++ ++EY+ ++V E+LRL+P + + R K DV
Sbjct: 309 QKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDV------ 361
Query: 286 GDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSP 345
+ +G +P G + + Y LHR P +W P +F PERF K KD DP
Sbjct: 362 -EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-------NIDP---- 409
Query: 346 GALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE-LKGSPESVELV 404
Y + FG GPR C+G +FA+M + L +LQ F + K + ++L
Sbjct: 410 -----------YIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLS 458
Query: 405 TGATIHTKNGLWCKLRER 422
G + + + K+ R
Sbjct: 459 LGGLLQPEKPVVLKVESR 476
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 186/423 (43%), Gaps = 57/423 (13%)
Query: 2 GKGLIP-ADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGN 60
G+GL+ + + W ++RRVI F L +++ F + K E+L+E +++
Sbjct: 74 GQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNE-------KAEQLVEILEAKADG 126
Query: 61 SIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKI 120
+ ++ + A+DI+ F + + + + E I +
Sbjct: 127 QTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEG-------ITASRN 179
Query: 121 PLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFL 180
LA+++ P +RK +++ L + R+ + R+E + A +L +
Sbjct: 180 TLAKFL-PGKRKQLREVRESIRFLRQVGRDWVQRRRE-------ALKRGEEVPADILTQI 231
Query: 181 VDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQK 240
+ DD L D+ +T IAGHET+A L + V L++ P V + QAEVD V+G K
Sbjct: 232 LKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK 291
Query: 241 KPT-FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDI 299
+ FE L +L+Y+ ++ ESLRLYP P R ++ + L G R VP T +
Sbjct: 292 RYLDFEDLGRLQYLSQVLKESLRLYP-PAWGTFRLLEEETLIDGVR-------VPGNTPL 343
Query: 300 FLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAF 359
S Y + R +++ P F P+RF PGA P + +
Sbjct: 344 LFSTYVMGRMDTYFEDPLTFNPDRF-------------------GPGAPKPR-----FTY 379
Query: 360 LGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVELVTGATIHTKNGLWCKL 419
F G R C+G QFA ME V +A LLQ+ + L + L AT+ + + C L
Sbjct: 380 FPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG-QRFGLQEQATLKPLDPVLCTL 438
Query: 420 RER 422
R R
Sbjct: 439 RPR 441
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 189/437 (43%), Gaps = 79/437 (18%)
Query: 3 KGLIPADLDTWKQRRRVIAPGFHALY------LEAMVNMFADCSERTIMKFEKLLEGEDS 56
KG+ AD Q R +A AL+ LE ++ C E L + +
Sbjct: 92 KGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKII-----CQE-----ISTLCDMLAT 141
Query: 57 RGGNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFY-- 114
G SI++ F ++ ++I L FN + + E VI+ + + + +
Sbjct: 142 HNGQSIDISFPV-FVAVT-NVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDL 199
Query: 115 IPYWKIPLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDA 174
+P+ KI + + K ++ +KI ND L+ ++ N KE K +S +N+ D
Sbjct: 200 VPWLKIFPNKTL----EKLKSHVKIRNDLLNKILENYKE--------KFRSDSITNMLD- 246
Query: 175 SLLRFLVDM----RGADVDDRQLRDDLMTMLI-----AGHETTAAVLTWAVFLLAQNPSK 225
+L++ ++ G D D L D+ + I AG ETT +V+ W + L NP
Sbjct: 247 TLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQV 306
Query: 226 VKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY 284
KK E+D +G + PT +L + + E LRL P P+LI D G +
Sbjct: 307 KKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEF 366
Query: 285 RGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRS 344
DK GT++ ++++ LH + W +P +F PERFL P G PS S
Sbjct: 367 AVDK-------GTEVIINLWALHHNEKEWHQPDQFMPERFLNP------AGTQLISPSVS 413
Query: 345 PGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE---------LK 395
+L FG GPR C+G+ A E + +A LLQ+FD+E L+
Sbjct: 414 --------------YLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLE 459
Query: 396 GSPESVELVTGATIHTK 412
G P+ V L+ + K
Sbjct: 460 GIPKVVFLIDSFKVKIK 476
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 135/287 (47%), Gaps = 49/287 (17%)
Query: 121 PLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFL 180
PL R +P R+F + L ++ +D +I + + Q+ D LL L
Sbjct: 204 PLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPD---------------DLLTAL 248
Query: 181 VDMR---GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVL 237
++ + G + ++++ D ++ +L G ET A+ + W + LA +P + + EV++V
Sbjct: 249 LEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT 308
Query: 238 GQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGT 297
G + FE ++KL + ++ E++RL P +L RR + L GGYR +PAG
Sbjct: 309 GGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESEL-GGYR-------IPAGA 360
Query: 298 DIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDY 357
DI S Y + R P +D EF+P+R+L P R+ V Y
Sbjct: 361 DIIYSPYAIQRDPKSYDDNLEFDPDRWL---------------PERAAN-------VPKY 398
Query: 358 AFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE-LKGSPESVEL 403
A F G RKC D F++ + T+ A L K+ E + GS ++V +
Sbjct: 399 AMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRV 445
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 144/290 (49%), Gaps = 48/290 (16%)
Query: 131 RKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGADVDD 190
+K++ +K + D ++ LI A++ R+ + EKL+ D + L + RG D+
Sbjct: 242 KKYEKSVKDLKDAIEVLI--AEKRRRISTEEKLEE-----CMDFATELILAEKRG-DLTR 293
Query: 191 RQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKL 250
+ ++ MLIA +T + L + +FL+A++P+ + E+ +V+G++ + ++KL
Sbjct: 294 ENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKL 353
Query: 251 EYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSP 310
+ + + ES+R P L++R+ ++ DV+ DGYPV GT+I L+I +HR
Sbjct: 354 KVMENFIYESMRYQPVVDLVMRKALEDDVI--------DGYPVKKGTNIILNIGRMHRLE 405
Query: 311 YFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCV 370
+F +P+EF E F K P R F FG GPR C
Sbjct: 406 FF-PKPNEFTLENFAKNV------------PYR--------------YFQPFGFGPRGCA 438
Query: 371 GDQFAVMESTVGLAMLLQKFDIE-LKG-SPESVELVTGATIH---TKNGL 415
G A++ L LL++F ++ L+G ES++ + ++H TKN L
Sbjct: 439 GKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNML 488
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 55/338 (16%)
Query: 64 LDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLA 123
+ ++ EFS L II F KE ++ A + + + +W I +
Sbjct: 159 VTIQKEFSLLTCSIICYLTFG------NKEDTLVHAFHDCVQDLMKTWD----HWSIQIL 208
Query: 124 RWIVPRQRKFQND----LKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRF 179
+VP R F N LK + D ++ +E+ V Q RD ++ + R
Sbjct: 209 D-MVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAG-QWRDMTDYMLQGVGRQ 266
Query: 180 LVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ 239
V+ + + + ++ + I G ETTA+ L+WAV L +P ++ Q E+D LG
Sbjct: 267 RVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGP 326
Query: 240 ----KKPTFESLKKLEYIRLIVAESLRLYPQPPL-LIRRTIKPDVLPGGYRGDKDGYPVP 294
+ T++ +L + +AE LRL P PL L RT +P + GY +P
Sbjct: 327 GASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSI--------FGYDIP 378
Query: 295 AGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIV 354
G + ++ H W++PHEF P+RFL+P G +PS
Sbjct: 379 EGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEP----------GANPSA----------- 417
Query: 355 SDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDI 392
L FG G R C+G+ A +E V LA LLQ F +
Sbjct: 418 -----LAFGCGARVCLGESLARLELFVVLARLLQAFTL 450
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 34/228 (14%)
Query: 179 FLVDMRGAD-VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVL 237
FL D+ D + ++L + + +A ETTA L W ++ L++NP ++ EV SVL
Sbjct: 269 FLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVL 328
Query: 238 -GQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAG 296
+ P E L+ + Y++ + ES+RL P P R KP VL G+ Y +P G
Sbjct: 329 PDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVL-----GE---YALPKG 380
Query: 297 TDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSD 356
T + L+ L S ++ H+F PER+L+ K + +
Sbjct: 381 TVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKI-----------------------NP 417
Query: 357 YAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVELV 404
+A L FG G R C+G + A ++ + L ++QK+DI + E VE++
Sbjct: 418 FAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDI-VATDNEPVEML 464
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVA 258
++IAG ETT VL WA+ +A P+ + Q E+D ++G KP+++ K+ Y ++
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLH 340
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHE 318
E LR PL I D + GY +P GT + ++Y++H +W P
Sbjct: 341 EVLRFCNIVPLGIFHATSEDAV-------VRGYSIPKGTTVITNLYSVHFDEKYWRDPEV 393
Query: 319 FEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVME 378
F PERFL SG+ + AL P F G R C+G+ A ME
Sbjct: 394 FHPERFLDS---------SGYFAKKE--ALVP-----------FSLGRRHCLGEHLARME 431
Query: 379 STVGLAMLLQKFDIEL 394
+ LLQ+F +
Sbjct: 432 MFLFFTALLQRFHLHF 447
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVA 258
++IAG ETT VL WA+ +A P+ + Q E+D ++G KP+++ K+ Y ++
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLH 340
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHE 318
E LR PL I D + GY +P GT + ++Y++H +W P
Sbjct: 341 EVLRFCNIVPLGIFHATSEDAV-------VRGYSIPKGTTVITNLYSVHFDEKYWRDPEV 393
Query: 319 FEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVME 378
F PERFL SG+ + AL P F G R C+G+ A ME
Sbjct: 394 FHPERFLDS---------SGYFAKKE--ALVP-----------FSLGRRHCLGEHLARME 431
Query: 379 STVGLAMLLQKFDIEL 394
+ LLQ+F +
Sbjct: 432 MFLFFTALLQRFHLHF 447
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 165/401 (41%), Gaps = 66/401 (16%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
W RRR+ G + ++ +D + T E+ + E E S
Sbjct: 103 VWAARRRLAQNGLKSF------SIASDPASSTSCYLEEHVSKE-----------AEVLIS 145
Query: 72 SLALDIIGLGVFN-YDFGSVTKESPVIKAVYGTLFEAEHRSTFYI--------------- 115
+L + G G FN Y + V+ + + +G ++ H+ +
Sbjct: 146 TLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGN 205
Query: 116 PYWKIPLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSN-LKDA 174
P IP+ R++ N K +N+ ++ + +T EK RD ++ L +
Sbjct: 206 PADFIPILRYL---PNPSLNAFKDLNEKFYSFMQKMVKEHYKT-FEKGHIRDITDSLIEH 261
Query: 175 SLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVD 234
+ L + + D ++ + ++ + AG +T ++W++ L NP +K Q E+D
Sbjct: 262 CQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELD 321
Query: 235 SVLGQ-KKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPV 293
+V+G+ ++P L Y+ + E+ R P I + D G+ +
Sbjct: 322 TVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDT-------SLKGFYI 374
Query: 294 PAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEI 353
P G +F++ + ++ W P EF PERFL P GA+ +++
Sbjct: 375 PKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPD-----------------GAI--DKV 415
Query: 354 VSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIEL 394
+S+ + FG G RKC+G+ A E + LA+LLQ+ + +
Sbjct: 416 LSEKVII-FGMGKRKCIGETIARWEVFLFLAILLQRVEFSV 455
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 40/234 (17%)
Query: 192 QLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLE 251
+L+D ++ +L AGHET + L+ LL Q+ ++ + E + + ++ T E+LKK+
Sbjct: 243 ELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMP 302
Query: 252 YIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYR-----GDKDGYPVPAGTDIFLSIYNL 306
Y+ ++ E LRL P + GG+R G+ P G + I
Sbjct: 303 YLDQVLQEVLRLIPP-------------VGGGFRELIQDCQFQGFHFPKGWLVSYQISQT 349
Query: 307 HRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGP 366
H P + P +F+PERF +G + +P +A + FGGG
Sbjct: 350 HADPDLYPDPEKFDPERFTP-------DGSATHNPP--------------FAHVPFGGGL 388
Query: 367 RKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVELVTGATIHTKNGLWCKLR 420
R+C+G +FA +E + L+Q+FD L +++ELV + K+ L KL
Sbjct: 389 RECLGKEFARLEMKLFATRLIQQFDWTLLPG-QNLELVVTPSPRPKDNLRVKLH 441
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 49/283 (17%)
Query: 128 PRQRKFQNDLKIINDCLDGL---IRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR 184
P+Q+ FQ CL GL I E Q T ++ RD+ D+ L+R + +
Sbjct: 211 PQQQAFQ--------CLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEK 258
Query: 185 GADVDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-K 240
+ + L++ +MT L I G ET + L + LL ++P K E+D V+G+ +
Sbjct: 259 NPNTE-FYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR 317
Query: 241 KPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIF 300
+P FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++
Sbjct: 318 QPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT---KFRD----FFLPKGTEVY 370
Query: 301 LSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFL 360
+ ++ R P F+ P +F P+ FL + + AF+
Sbjct: 371 PMLGSVLRDPSFFSNPQDFNPQHFLNEK----------------------GQFKKSDAFV 408
Query: 361 GFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVEL 403
F G R C G+ A ME + ++Q F ++ SP+ +++
Sbjct: 409 PFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDV 451
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 43/280 (15%)
Query: 128 PRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGAD 187
P+Q+ FQ + L+ I E Q T ++ RD+ D+ L+R + + +
Sbjct: 211 PQQQAFQ-----LLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEKNPN 261
Query: 188 VDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
+ L++ +MT L I G ET + L + LL ++P K E+D V+G+ ++P
Sbjct: 262 TE-FYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSI 303
FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++ +
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT---KFRD----FFLPKGTEVYPML 373
Query: 304 YNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFG 363
++ R P F+ P +F P+ FL + + AF+ F
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEK----------------------GQFKKSDAFVPFS 411
Query: 364 GGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVEL 403
G R C G+ A ME + ++Q F ++ SP+ +++
Sbjct: 412 IGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDV 451
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 43/280 (15%)
Query: 128 PRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGAD 187
P+Q+ FQ + L+ I E Q T ++ RD+ D+ L+R + + +
Sbjct: 211 PQQQAFQ-----LLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEKNPN 261
Query: 188 VDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
+ L++ +MT L I G ET + L + LL ++P K E+D V+G+ ++P
Sbjct: 262 TE-FYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSI 303
FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++ +
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT---KFRD----FFLPKGTEVYPML 373
Query: 304 YNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFG 363
++ R P F+ P +F P+ FL + + AF+ F
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEK----------------------GQFKKSDAFVPFS 411
Query: 364 GGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVEL 403
G R C G+ A ME + ++Q F ++ SP+ +++
Sbjct: 412 IGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDV 451
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 43/280 (15%)
Query: 128 PRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGAD 187
P+Q+ FQ + L+ I E Q T ++ RD+ D+ L+R + + +
Sbjct: 211 PQQQAFQ-----LLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEKNPN 261
Query: 188 VDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
+ L++ +MT L + G ET + L + LL ++P K E+D V+G+ ++P
Sbjct: 262 TE-FYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSI 303
FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++ +
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT---KFRD----FFLPKGTEVYPML 373
Query: 304 YNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFG 363
++ R P F+ P +F P+ FL + + AF+ F
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEK----------------------GQFKKSDAFVPFS 411
Query: 364 GGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVEL 403
G R C G+ A ME + ++Q F ++ SP+ +++
Sbjct: 412 IGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDV 451
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 43/280 (15%)
Query: 128 PRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGAD 187
P+Q+ FQ + L+ I E Q T ++ RD+ D+ L+R + + +
Sbjct: 211 PQQQAFQ-----LLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEKNPN 261
Query: 188 VDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
+ L++ +MT L AG ET + L + LL ++P K E+D V+G+ ++P
Sbjct: 262 TE-FYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSI 303
FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++ +
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDT---KFRD----FFLPKGTEVYPML 373
Query: 304 YNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFG 363
++ R P F+ P +F P+ FL + + AF+ F
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEK----------------------GQFKKSDAFVPFS 411
Query: 364 GGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVEL 403
G R C G+ A ME + ++Q F ++ SP+ +++
Sbjct: 412 IGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDV 451
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 32/245 (13%)
Query: 156 QETDVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLI-----AGHETTAA 210
Q+T E Q D ++++D + F +G + + + L+ AG +T
Sbjct: 241 QKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTT 300
Query: 211 VLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVAESLRLYPQPPL 269
++W++ L P +K Q E+D+V+G +++P +L Y+ + E+ R P
Sbjct: 301 AISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPF 360
Query: 270 LIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRK 329
I + D +G+ +P +F++ + ++ P W+ P EF PERFL
Sbjct: 361 TIPHSTTRDT-------TLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFL---- 409
Query: 330 DVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQK 389
+ N+ +S+ L FG G R+C+G+ A E + LA+LLQ+
Sbjct: 410 --------------TADGTAINKPLSEKMML-FGMGKRRCIGEVLAKWEIFLFLAILLQQ 454
Query: 390 FDIEL 394
+ +
Sbjct: 455 LEFSV 459
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 31/232 (13%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP-TFESLKKLEYIRL 255
++M+ AGH T++ +W + L ++ E+D + G + +F +L+++ +
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 256 IVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDR 315
++ E+LRL+P P +++ R K + G+R + G + S +R P +
Sbjct: 310 VLKETLRLHP-PLIILMRVAKGEFEVQGHR-------IHEGDLVAASPAISNRIPEDFPD 361
Query: 316 PHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFA 375
PH+F P R+ +PR++ + W+ ++ FG G +CVG FA
Sbjct: 362 PHDFVPARYEQPRQEDLLNRWT---------------------WIPFGAGRHRCVGAAFA 400
Query: 376 VMESTVGLAMLLQKFDIELKGSPESVEL-VTGATIHTKNGLWCKLRERSAVH 426
+M+ ++LL++++ E+ PES + + + R R+ VH
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPACVRYRRRTGVH 452
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 31/232 (13%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP-TFESLKKLEYIRL 255
++M+ AGH T++ +W + L ++ E+D + G + +F +L+++ +
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 256 IVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDR 315
++ E+LRL+P P +++ R K + G+R + G + S +R P +
Sbjct: 310 VLKETLRLHP-PLIILMRVAKGEFEVQGHR-------IHEGDLVAASPAISNRIPEDFPD 361
Query: 316 PHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFA 375
PH+F P R+ +PR++ + W+ ++ FG G +CVG FA
Sbjct: 362 PHDFVPARYEQPRQEDLLNRWT---------------------WIPFGAGRHRCVGAAFA 400
Query: 376 VMESTVGLAMLLQKFDIELKGSPESVEL-VTGATIHTKNGLWCKLRERSAVH 426
+M+ ++LL++++ E+ PES + + + R R+ VH
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTGVH 452
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 124/287 (43%), Gaps = 46/287 (16%)
Query: 149 RNAKETRQETDV--EKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDD-----LMTML 201
R + R+ D+ + +Q R S K +L+ L+D D R L DD L+ +L
Sbjct: 204 RRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLD--ATYKDGRPLTDDEVAGMLIGLL 261
Query: 202 IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP--TFESLKKLEYIRLIVAE 259
+AG T++ W F LA++ + KK E +V G+ P T++ LK L + + E
Sbjct: 262 LAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKE 321
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
+LRL P +++R P + G Y +P G + +S R W +F
Sbjct: 322 TLRLRPPIMIMMRMARTPQTVAG--------YTIPPGHQVCVSPTVNQRLKDSWVERLDF 373
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVME- 378
P+R+L+ G +A++ FG G +C+G+ FA ++
Sbjct: 374 NPDRYLQDNPASG----------------------EKFAYVPFGAGRHRCIGENFAYVQI 411
Query: 379 STVGLAML-LQKFDIELKGSPESVELVTGATIHTKNGLWCKLRERSA 424
T+ ML L +FD+ + G +V T IHT + + RS
Sbjct: 412 KTIWSTMLRLYEFDL-IDGYFPTVNYTT--MIHTPENPVIRYKRRST 455
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 31/232 (13%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP-TFESLKKLEYIRL 255
++M+ AGH T++ +W + L ++ E+D + G + +F +L+++ +
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 256 IVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDR 315
++ E+LRL+P P +++ R K + G+R + G + S +R P +
Sbjct: 310 VLKETLRLHP-PLIILMRVAKGEFEVQGHR-------IHEGDLVAASPAISNRIPEDFPD 361
Query: 316 PHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFA 375
PH+F P R+ +PR++ + W+ ++ FG G +CVG FA
Sbjct: 362 PHDFVPARYEQPRQEDLLNRWT---------------------WIPFGAGRHRCVGAAFA 400
Query: 376 VMESTVGLAMLLQKFDIELKGSPESVEL-VTGATIHTKNGLWCKLRERSAVH 426
+M+ ++LL++++ E+ PES + + + R R+ VH
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTGVH 452
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 37/228 (16%)
Query: 179 FLVDMRGA------DVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAE 232
FL +M A +D LR + + AG TT+ L W + L+ +P ++ Q E
Sbjct: 253 FLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQE 312
Query: 233 VDSVLGQ-KKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGY 291
+D V+GQ ++P + Y ++ E R PL + D+ G+R
Sbjct: 313 IDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFR------ 366
Query: 292 PVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPN 351
+P GT + ++ ++ + W++P F PE FL +
Sbjct: 367 -IPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQ----------------------G 403
Query: 352 EIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIEL-KGSP 398
V AFL F G R C+G+ A ME + LLQ F + G P
Sbjct: 404 HFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQP 451
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 31/232 (13%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP-TFESLKKLEYIRL 255
++M+ AGH T++ +W + L ++ E+D + G + +F +L+++ +
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 256 IVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDR 315
++ E+LRL+P P +++ R K + G+R + G + S +R P +
Sbjct: 310 VLKETLRLHP-PLIILMRVAKGEFEVQGHR-------IHEGDLVAASPAISNRIPEDFPD 361
Query: 316 PHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFA 375
PH+F P R+ +PR++ + W+ ++ FG G +CVG FA
Sbjct: 362 PHDFVPARYEQPRQEDLLNRWT---------------------WIPFGAGRHRCVGAAFA 400
Query: 376 VMESTVGLAMLLQKFDIELKGSPESVEL-VTGATIHTKNGLWCKLRERSAVH 426
+M+ ++LL++++ E+ PES + + + R R+ VH
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTGVH 452
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 37/228 (16%)
Query: 179 FLVDMRGA------DVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAE 232
FL +M A +D LR + + AG TT+ L W + L+ +P ++ Q E
Sbjct: 253 FLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQE 312
Query: 233 VDSVLGQ-KKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGY 291
+D V+GQ ++P + Y ++ E R PL + D+ G+R
Sbjct: 313 IDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFR------ 366
Query: 292 PVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPN 351
+P GT + ++ ++ + W++P F PE FL +
Sbjct: 367 -IPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQ----------------------G 403
Query: 352 EIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIEL-KGSP 398
V AFL F G R C+G+ A ME + LLQ F + G P
Sbjct: 404 HFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQP 451
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 153/359 (42%), Gaps = 58/359 (16%)
Query: 57 RGGNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKES-PVIKAVYGTL-FEAEHRSTFY 114
RG + +D S ++I VF F KE +++ + G+ F A Y
Sbjct: 139 RGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLY 198
Query: 115 IPYWKIPLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDA 174
+ + + P+Q+ F+ +L+ + D + + + + T ++ RD+ D+
Sbjct: 199 EMFSSV-MKHLPGPQQQAFK-ELQGLEDFIAKKVEHNQRT-----LDPNSPRDFI---DS 248
Query: 175 SLLRFLVDMRGADVDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQA 231
L+R + + + + L++ +MT L AG ET + L + LL ++P K
Sbjct: 249 FLIRMQEEEKNPNTE-FYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHE 307
Query: 232 EVDSVLGQ-KKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGG--YRGDK 288
E+D V+G+ ++P FE K+ Y ++ E R D+LP G +R +K
Sbjct: 308 EIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRF-------------GDMLPMGLAHRVNK 354
Query: 289 DG----YPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRS 344
D + +P GT++F + ++ R P F+ P +F P+ FL +
Sbjct: 355 DTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKK---------------- 398
Query: 345 PGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVEL 403
+ AF+ F G R C G+ A ME + ++Q F + SP+ +++
Sbjct: 399 ------GQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDV 451
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 40/278 (14%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSN-----PRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
K+ Y ++ E RL P + T+ D +R GY +P T++F + +
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
Query: 307 HRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGP 366
P +++ P+ F P FL + GAL NE F+ F G
Sbjct: 377 LHDPRYFETPNTFNPGHFLD-----------------ANGALKRNE-----GFMPFSLGK 414
Query: 367 RKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVELV 404
R C+G+ A E + +LQ F I PE ++L
Sbjct: 415 RICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 40/278 (14%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSN-----PRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
K+ Y ++ E RL P + T+ D +R GY +P T++F + +
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
Query: 307 HRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGP 366
P +++ P+ F P FL + GAL NE F+ F G
Sbjct: 377 LHDPRYFETPNTFNPGHFLD-----------------ANGALKRNE-----GFMPFSLGK 414
Query: 367 RKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVELV 404
R C+G+ A E + +LQ F I PE ++L
Sbjct: 415 RICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 43/244 (17%)
Query: 153 ETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVL 212
E RQ+ V DY + L R L D + + D ++ ++ ML G +TT+ L
Sbjct: 247 ELRQKGSVH----HDYRGI----LYRLLGDSKMSFED---IKANVTEMLAGGVDTTSMTL 295
Query: 213 TWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKL-EYIRLIVAESLRLYPQPPLLI 271
W ++ +A+N +AEV + Q + ++ +L ++ + E+LRL+P L
Sbjct: 296 QWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ 355
Query: 272 RRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDV 331
R + VL Y +PA T + ++IY L R P F+ P F+P R+L K++
Sbjct: 356 RYLVNDLVL--------RDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNI 407
Query: 332 GIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFD 391
+ + LGFG G R+C+G + A +E T+ L +L+ F
Sbjct: 408 -----------------------TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 444
Query: 392 IELK 395
+E++
Sbjct: 445 VEIQ 448
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 43/244 (17%)
Query: 153 ETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVL 212
E RQ+ V DY + L R L D + + D ++ ++ ML G +TT+ L
Sbjct: 244 ELRQKGSVH----HDYRGI----LYRLLGDSKMSFED---IKANVTEMLAGGVDTTSMTL 292
Query: 213 TWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKL-EYIRLIVAESLRLYPQPPLLI 271
W ++ +A+N +AEV + Q + ++ +L ++ + E+LRL+P L
Sbjct: 293 QWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ 352
Query: 272 RRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDV 331
R + VL Y +PA T + ++IY L R P F+ P F+P R+L K++
Sbjct: 353 RYLVNDLVL--------RDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNI 404
Query: 332 GIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFD 391
+ + LGFG G R+C+G + A +E T+ L +L+ F
Sbjct: 405 -----------------------TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 441
Query: 392 IELK 395
+E++
Sbjct: 442 VEIQ 445
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 40/278 (14%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSN-----PRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
K+ Y ++ E RL P + T+ D +R GY +P T++F + +
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
Query: 307 HRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGP 366
P +++ P+ F P FL + GAL NE F+ F G
Sbjct: 377 LHDPRYFETPNTFNPGHFLD-----------------ANGALKRNE-----GFMPFSLGK 414
Query: 367 RKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVELV 404
R C+G+ A E + +LQ F I PE ++L
Sbjct: 415 RICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 164/418 (39%), Gaps = 71/418 (16%)
Query: 2 GKGLIPADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNS 61
G G+I A+ + WK RR F + ER + + L+E + R
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGKRSVEERIQEEAQCLIE--ELRKSKG 143
Query: 62 IELDLEAEFSSLALDIIGLGVFNYDFGSVTKES-----------PVIKAVYGTLFEAEHR 110
+D F S+ +II VF F +E +I +V+G LFE
Sbjct: 144 ALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFE---- 199
Query: 111 STFYIPYWK-IPLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYS 169
+ + K P A R+ +L+ IN + + +ET ++ RD
Sbjct: 200 --LFSGFLKHFPGA------HRQVYKNLQEINAYIGHSVEKHRET-----LDPSAPRD-- 244
Query: 170 NLKDASLLRFLVDMRGA--DVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVK 227
L D LL + A + + L + +++ AG ETT+ L + L+ + P +
Sbjct: 245 -LIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAE 303
Query: 228 KAQAEVDSVLG-QKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRG 286
+ E++ V+G + P K+ Y ++ E R P+ + + +RG
Sbjct: 304 RVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHT---SFRG 360
Query: 287 DKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPG 346
Y +P T++FL + P+++++P F P+ FL + G
Sbjct: 361 ----YIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLD-----------------ANG 399
Query: 347 ALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVELV 404
AL E AF+ F G R C+G+ A E + +LQ F + +PE ++L
Sbjct: 400 ALKKTE-----AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLT 452
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 40/278 (14%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSN-----PRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
K+ Y ++ E RL P + T+ D +R GY +P T++F + +
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
Query: 307 HRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGP 366
P +++ P+ F P FL + GAL NE F+ F G
Sbjct: 377 LHDPRYFETPNTFNPGHFLD-----------------ANGALKRNE-----GFMPFSLGK 414
Query: 367 RKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVELV 404
R C G+ A E + +LQ F I PE ++L
Sbjct: 415 RICAGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 40/278 (14%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSN-----PRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
K+ Y ++ E RL P + T+ D +R GY +P T++F + +
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
Query: 307 HRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGP 366
P +++ P+ F P FL + GAL NE F+ F G
Sbjct: 377 LHDPRYFETPNTFNPGHFLD-----------------ANGALKRNE-----GFMPFSLGK 414
Query: 367 RKCVGDQFAVMESTVGLAMLLQKFDIELKGSPESVELV 404
R C+G+ A E + +LQ F I PE ++L
Sbjct: 415 RICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 32/204 (15%)
Query: 193 LRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFES-LKKLE 251
++ ++ ML G TT+ L W ++ +A++ + + + EV + Q + L+ +
Sbjct: 277 VKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVP 336
Query: 252 YIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPY 311
++ + E+LRL+P L R VL Y +PA T + ++IY + R P
Sbjct: 337 LLKASIKETLRLHPISVTLQRYPESDLVL--------QDYLIPAKTLVQVAIYAMGRDPA 388
Query: 312 FWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVG 371
F+ P +F+P R+L KD + + LGFG G R+CVG
Sbjct: 389 FFSSPDKFDPTRWLSKDKD-----------------------LIHFRNLGFGWGVRQCVG 425
Query: 372 DQFAVMESTVGLAMLLQKFDIELK 395
+ A +E T+ L +L+ F +E++
Sbjct: 426 RRIAELEMTLFLIHILENFKVEMQ 449
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 33/233 (14%)
Query: 185 GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKK-PT 243
GA +D + + + A +T + L W + L + P + QAE+D V+G+ + P
Sbjct: 272 GARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPC 331
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRR--TIKPDVLPGGYRGDKDGYPVPAGTDIFL 301
L Y+ + E++R P+ I T VL GY +P T +F+
Sbjct: 332 MGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVL---------GYHIPKDTVVFV 382
Query: 302 SIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLG 361
+ ++++ P W P F+P RFL KD L ++ S +
Sbjct: 383 NQWSVNHDPLKWPNPENFDPARFLD--KD----------------GLINKDLTSRV--MI 422
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKFDIELK-GSPESVELVTGATIHTKN 413
F G R+C+G++ + M+ + +++L + D P + G TI K+
Sbjct: 423 FSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPKS 475
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 48/273 (17%)
Query: 148 IRNAKETRQETDVEKLQSRDYSNL-KDASLLRFLVDMRGADVDD--RQLRDDLMTMLIA- 203
R+A+ Q+ E + +R+ KD + L + GA D R + ++ M++A
Sbjct: 201 CRDARAELQDILSEIIIAREKEEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAA 260
Query: 204 ---GHETTAAVLTWAVFLLA--QNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVA 258
G T+ TW++ L +N + K E+D Q ++++ +
Sbjct: 261 MFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNYD-NVMEEMPFAEQCAR 319
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHE 318
ES+R P +L+R+ +KP + Y VP G I S H+ + P E
Sbjct: 320 ESIRRDPPLVMLMRKVLKPVQV--------GKYVVPEGDIIACSPLLSHQDEEAFPNPRE 371
Query: 319 FEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVME 378
+ PER +K + D AF GFG G KC+G++F +++
Sbjct: 372 WNPERNMK---------------------------LVDGAFCGFGAGVHKCIGEKFGLLQ 404
Query: 379 STVGLAMLLQKFDIELKG---SPESVELVTGAT 408
LA +L+ +D EL G P +V G T
Sbjct: 405 VKTVLATVLRDYDFELLGPLPEPNYHTMVVGPT 437
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 97/227 (42%), Gaps = 54/227 (23%)
Query: 195 DDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIR 254
+ +T+L+AGHET A+ LTW+ LL+ P K+ V F+
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKR----VAESEEAALAAFQ--------- 259
Query: 255 LIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWD 314
E+LRLYP +L RR +P +L G+ +P GT + LS Y R ++
Sbjct: 260 ----EALRLYPPAWILTRRLERPLLL-----GEDR---LPQGTTLVLSPYVTQR--LYFP 305
Query: 315 RPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQF 374
F+PERFL R PS G +P FG G R C+G F
Sbjct: 306 EGEAFQPERFLAERG----------TPS---GRYFP-----------FGLGQRLCLGRDF 341
Query: 375 AVMESTVGLAMLLQKFDIELKGSPESVELVTGATIHTKNGLWCKLRE 421
A++E + L ++F ++ P + V T+ + GL + RE
Sbjct: 342 ALLEGPIVLRAFFRRFRLDPLPFPRVLAQV---TLRPEGGLPARPRE 385
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 54/227 (23%)
Query: 195 DDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIR 254
+ +T+L+AGHET A+ LTW+ LL+ P K+ V F+
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKR----VAESEEAALAAFQ--------- 259
Query: 255 LIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWD 314
E+LRLYP +L RR +P +L G+ +P GT + LS Y R +F D
Sbjct: 260 ----EALRLYPPAWILTRRLERPLLL-----GEDR---LPPGTTLVLSPYVTQRL-HFPD 306
Query: 315 RPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQF 374
F PERFL+ R PS G +P FG G R C+G F
Sbjct: 307 G-EAFRPERFLEERG----------TPS---GRYFP-----------FGLGQRLCLGRDF 341
Query: 375 AVMESTVGLAMLLQKFDIELKGSPESVELVTGATIHTKNGLWCKLRE 421
A++E + L ++F ++ P + V T+ + GL + RE
Sbjct: 342 ALLEGPIVLRAFFRRFRLDPLPFPRVLAQV---TLRPEGGLPARPRE 385
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 44/273 (16%)
Query: 135 NDLKIINDCLDG----LIRNAKETR---QETDVEKLQSRDYSNLKDASLLRFLVDM---- 183
N+ ++ DC G +++N TR +E E S D +N +D + FL+ M
Sbjct: 199 NNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRDF-IDCFLIKMEQEK 257
Query: 184 --RGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QK 240
+ ++ + L + + +AG ETT+ L + + LL ++P K Q E+D V+G +
Sbjct: 258 DNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHR 317
Query: 241 KPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIF 300
P + + Y +V E R P + + D +R Y +P GT I
Sbjct: 318 SPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDT---KFR----NYLIPKGTTIM 370
Query: 301 LSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFL 360
+ ++ + P+ F+P FL N SDY F+
Sbjct: 371 ALLTSVLHDDKEFPNPNIFDPGHFLDKNG---------------------NFKKSDY-FM 408
Query: 361 GFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
F G R C G+ A ME + L +LQ F+++
Sbjct: 409 PFSAGKRICAGEGLARMELFLFLTTILQNFNLK 441
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 37/249 (14%)
Query: 161 EKLQSRDYSNLKDASLLRFLVDM------RGADVDDRQLRDDLMTMLIAGHETTAAVLTW 214
E +S D +N +D + FL+ M + ++ L + + + AG ETT+ L +
Sbjct: 233 EHQESMDMNNPQDF-IDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRY 291
Query: 215 AVFLLAQNPSKVKKAQAEVDSVLGQKK-PTFESLKKLEYIRLIVAESLRLYPQPPLLIRR 273
A+ LL ++P K Q E++ V+G+ + P + + Y +V E R P +
Sbjct: 292 ALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPH 351
Query: 274 TIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGI 333
+ D+ +R Y +P GT I +S+ ++ + P F+P FL
Sbjct: 352 AVTCDI---KFR----NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLD------- 397
Query: 334 EGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
EG F S+ F+ F G R CVG+ A ME + L +LQ F+++
Sbjct: 398 EG-GNFKKSK--------------YFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 442
Query: 394 LKGSPESVE 402
P++++
Sbjct: 443 SLVDPKNLD 451
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 37/249 (14%)
Query: 161 EKLQSRDYSNLKDASLLRFLVDM------RGADVDDRQLRDDLMTMLIAGHETTAAVLTW 214
E +S D +N +D + FL+ M + ++ L + + + AG ETT+ L +
Sbjct: 231 EHQESMDMNNPQDF-IDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRY 289
Query: 215 AVFLLAQNPSKVKKAQAEVDSVLGQKK-PTFESLKKLEYIRLIVAESLRLYPQPPLLIRR 273
A+ LL ++P K Q E++ V+G+ + P + + Y +V E R P +
Sbjct: 290 ALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPH 349
Query: 274 TIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGI 333
+ D+ +R Y +P GT I +S+ ++ + P F+P FL
Sbjct: 350 AVTCDI---KFR----NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLD------- 395
Query: 334 EGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIE 393
EG F S+ F+ F G R CVG+ A ME + L +LQ F+++
Sbjct: 396 EG-GNFKKSK--------------YFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 440
Query: 394 LKGSPESVE 402
P++++
Sbjct: 441 SLVDPKNLD 449
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 136/321 (42%), Gaps = 49/321 (15%)
Query: 54 EDSRGGNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTF 113
+++RG S+ LD++ ++ L +F G V + E +ST
Sbjct: 152 QNARG--SLTLDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTV 209
Query: 114 YIPYWKIPLARWIVPRQRKFQNDLKIINDCLDGLIRNA-KETRQETDVEKLQSRDYSNLK 172
+ + L+RWI P+ K + DC+ N ++ QE + Q Y+ +
Sbjct: 210 QLMFMPRSLSRWISPKVWKEHFEAW---DCIFQYGDNCIQKIYQELAFNRPQ--HYTGIV 264
Query: 173 DASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNP--SKVKKAQ 230
LL+ A++ ++ + M + +TTA L +F LA+NP ++ + +
Sbjct: 265 AELLLK-------AELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQE 317
Query: 231 AEVDSVLGQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDG 290
+ + + P ++ +L +R + E+LRLYP L + R + D++
Sbjct: 318 SLAAAASISEHPQ-KATTELPLLRAALKETLRLYPVG-LFLERVVSSDLV-------LQN 368
Query: 291 YPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYP 350
Y +PAGT + + +Y+L R+ + RP + P+R+L R SG
Sbjct: 369 YHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRG-------SG------------ 409
Query: 351 NEIVSDYAFLGFGGGPRKCVG 371
++ + FG G R+C+G
Sbjct: 410 ----RNFHHVPFGFGMRQCLG 426
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 30/203 (14%)
Query: 203 AGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVAESL 261
AG ETT+ L +++ LL ++P + Q E++ V+G + P + ++ Y ++ E
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQ 335
Query: 262 RLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEP 321
R P + + DV +R Y +P GTDI S+ ++ + P F+P
Sbjct: 336 RFIDLLPTNLPHAVTRDV---RFRN----YFIPKGTDIITSLTSVLHDEKAFPNPKVFDP 388
Query: 322 ERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTV 381
FL SG N SDY F+ F G R CVG+ A ME +
Sbjct: 389 GHFLD---------ESG------------NFKKSDY-FMPFSAGKRMCVGEGLARMELFL 426
Query: 382 GLAMLLQKFDIELKGSPESVELV 404
L +LQ F ++ P+ +++
Sbjct: 427 FLTSILQNFKLQSLVEPKDLDIT 449
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 30/204 (14%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKK-PTFESLKKLEYIRLIVA 258
+L AG ETT+ L +A+ LL ++P K Q E++ V+G+ + P + + Y +V
Sbjct: 277 LLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVH 336
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHE 318
E R P + + DV +R Y +P GT I S+ ++ + P
Sbjct: 337 EVQRYIDLIPTSLPHAVTCDV---KFR----NYLIPKGTTILTSLTSVLHDNKEFPNPEM 389
Query: 319 FEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVME 378
F+P FL EG N S+Y F+ F G R CVG+ A ME
Sbjct: 390 FDPRHFLD-------EGG--------------NFKKSNY-FMPFSAGKRICVGEGLARME 427
Query: 379 STVGLAMLLQKFDIELKGSPESVE 402
+ L +LQ F+++ P+ ++
Sbjct: 428 LFLFLTFILQNFNLKSLIDPKDLD 451
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKK-PTFESLKKLEYIRLIVA 258
+ AG ETT+ L + + +L + P +K E+D V+G + P + +++ Y+ +V
Sbjct: 275 LFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVH 334
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDK--DGYPVPAGTDIFLSIYNLHRSPYFWDRP 316
E R T+ P LP D GY +P GT + ++ ++ + P
Sbjct: 335 EIQRFI---------TLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDP 385
Query: 317 HEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAV 376
+F+PE FL SDY F F G R C G+ A
Sbjct: 386 EKFKPEHFLNENGKFK---------------------YSDY-FKPFSTGKRVCAGEGLAR 423
Query: 377 MESTVGLAMLLQKFDIELKGSPESVELVTGATIHTKNGLWC 417
ME + L +LQ F+++ P+ ++L + IH G C
Sbjct: 424 MELFLLLCAILQHFNLKPLVDPKDIDL---SPIHI--GFGC 459
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 109/264 (41%), Gaps = 44/264 (16%)
Query: 149 RNAKETRQET-DVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHET 207
NA+E E+ E LQ R+ ++ + LR ++ + DD + + +L A
Sbjct: 215 HNAREKLAESLRHENLQKRE--SISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQAN 272
Query: 208 TAAVLTWAVFLLAQNPSKVKKAQAEVDSVL---GQK-----KPTFES---LKKLEYIRLI 256
T W++F + +NP +K A EV L GQK P S L L + I
Sbjct: 273 TIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSI 332
Query: 257 VAESLRLYPQPPLLIRRTIKPDVL----PGGYRGDKDGYPVPAGTDIFLSIYN--LHRSP 310
+ ESLRL L RT K D G Y KD DI +++Y +H P
Sbjct: 333 IKESLRL--SSASLNIRTAKEDFTLHLEDGSYNIRKD--------DI-IALYPQLMHLDP 381
Query: 311 YFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCV 370
+ P F+ +R+L + ++ Y N + Y ++ FG G C
Sbjct: 382 EIYPDPLTFKYDRYLD-------------ENGKTKTTFYCNGLKLKYYYMPFGSGATICP 428
Query: 371 GDQFAVMESTVGLAMLLQKFDIEL 394
G FA+ E L ++L F++EL
Sbjct: 429 GRLFAIHEIKQFLILMLSYFELEL 452
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 109/264 (41%), Gaps = 44/264 (16%)
Query: 149 RNAKETRQET-DVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHET 207
NA+E E+ E LQ R+ ++ + LR ++ + DD + + +L A
Sbjct: 215 HNAREKLAESLRHENLQKRE--SISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQAN 272
Query: 208 TAAVLTWAVFLLAQNPSKVKKAQAEVDSVL---GQK-----KPTFES---LKKLEYIRLI 256
T W++F + +NP +K A EV L GQK P S L L + I
Sbjct: 273 TIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSI 332
Query: 257 VAESLRLYPQPPLLIRRTIKPDVL----PGGYRGDKDGYPVPAGTDIFLSIYN--LHRSP 310
+ ESLRL L RT K D G Y KD DI +++Y +H P
Sbjct: 333 IKESLRL--SSASLNIRTAKEDFTLHLEDGSYNIRKD--------DI-IALYPQLMHLDP 381
Query: 311 YFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCV 370
+ P F+ +R+L + ++ Y N + Y ++ FG G C
Sbjct: 382 EIYPDPLTFKYDRYLD-------------ENGKTKTTFYCNGLKLKYYYMPFGSGATICP 428
Query: 371 GDQFAVMESTVGLAMLLQKFDIEL 394
G FA+ E L ++L F++EL
Sbjct: 429 GRLFAIHEIKQFLILMLSYFELEL 452
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 43/220 (19%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSK--VKKAQAEVDSVLGQKKPTFESLKKLEYIR 254
++ + AG T+ +W++ L +K + K E+D Q + ++ +
Sbjct: 271 IVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYD-NVMDEMPFAE 329
Query: 255 LIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWD 314
V ES+R P P L++ R +K +V G Y VP G I S H +
Sbjct: 330 RCVRESIRRDP-PLLMVMRMVKAEVKVGSYV-------VPKGDIIACSPLLSHHDEEAFP 381
Query: 315 RPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQF 374
P ++PER D ++G AF+GFG G KC+G +F
Sbjct: 382 NPRLWDPER------DEKVDG----------------------AFIGFGAGVHKCIGQKF 413
Query: 375 AVMESTVGLAMLLQKFDIEL----KGSPESVELVTGATIH 410
A+++ LA +++D +L P+ +V G T++
Sbjct: 414 ALLQVKTILATAFREYDFQLLRDEVPDPDYHTMVVGPTLN 453
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 43/220 (19%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSK--VKKAQAEVDSVLGQKKPTFESLKKLEYIR 254
++ + AG T+ +W++ L +K + K E+D Q + ++ +
Sbjct: 262 IVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYD-NVMDEMPFAE 320
Query: 255 LIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWD 314
V ES+R P P L++ R +K +V G Y VP G I S H +
Sbjct: 321 RCVRESIRRDP-PLLMVMRMVKAEVKVGSYV-------VPKGDIIACSPLLSHHDEEAFP 372
Query: 315 RPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQF 374
P ++PER D ++G AF+GFG G KC+G +F
Sbjct: 373 NPRLWDPER------DEKVDG----------------------AFIGFGAGVHKCIGQKF 404
Query: 375 AVMESTVGLAMLLQKFDIEL----KGSPESVELVTGATIH 410
A+++ LA +++D +L P+ +V G T++
Sbjct: 405 ALLQVKTILATAFREYDFQLLRDEVPDPDYHTMVVGPTLN 444
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 43/220 (19%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSK--VKKAQAEVDSVLGQKKPTFESLKKLEYIR 254
++ + AG T+ +W++ L +K + K E+D Q + ++ +
Sbjct: 256 IVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYD-NVMDEMPFAE 314
Query: 255 LIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWD 314
V ES+R P P L++ R +K +V G Y VP G I S H +
Sbjct: 315 RCVRESIRRDP-PLLMVMRMVKAEVKVGSYV-------VPKGDIIACSPLLSHHDEEAFP 366
Query: 315 RPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQF 374
P ++PER D ++G AF+GFG G KC+G +F
Sbjct: 367 NPRLWDPER------DEKVDG----------------------AFIGFGAGVHKCIGQKF 398
Query: 375 AVMESTVGLAMLLQKFDIEL----KGSPESVELVTGATIH 410
A+++ LA +++D +L P+ +V G T++
Sbjct: 399 ALLQVKTILATAFREYDFQLLRDEVPDPDYHTMVVGPTLN 438
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 41/201 (20%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQA---EVDSVLGQKKPTFESLKKLEYI 253
++ + AG T++ TW++ L +P+ VK +A E++ Q + ++ +
Sbjct: 258 IVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEIEEFPAQLNYN-NVMDEMPFA 315
Query: 254 RLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFW 313
ES+R P P L++ R + DV G Y VP G I S H +
Sbjct: 316 ERCARESIRRDP-PLLMLMRKVMADVKVGSYV-------VPKGDIIACSPLLSHHDEEAF 367
Query: 314 DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQ 373
P ++PER D +EG AF+GFG G KC+G +
Sbjct: 368 PEPRRWDPER------DEKVEG----------------------AFIGFGAGVHKCIGQK 399
Query: 374 FAVMESTVGLAMLLQKFDIEL 394
F +++ LA + +D +L
Sbjct: 400 FGLLQVKTILATAFRSYDFQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 41/201 (20%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQA---EVDSVLGQKKPTFESLKKLEYI 253
++ + AG T++ TW++ L +P+ VK +A E++ Q + ++ +
Sbjct: 257 IVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEIEEFPAQLNYN-NVMDEMPFA 314
Query: 254 RLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFW 313
ES+R P P L++ R + DV G Y VP G I S H +
Sbjct: 315 ERCARESIRRDP-PLLMLMRKVMADVKVGSYV-------VPKGDIIACSPLLSHHDEEAF 366
Query: 314 DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQ 373
P ++PER D +EG AF+GFG G KC+G +
Sbjct: 367 PEPRRWDPER------DEKVEG----------------------AFIGFGAGVHKCIGQK 398
Query: 374 FAVMESTVGLAMLLQKFDIEL 394
F +++ LA + +D +L
Sbjct: 399 FGLLQVKTILATAFRSYDFQL 419
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 41/201 (20%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQA---EVDSVLGQKKPTFESLKKLEYI 253
++ + AG T++ TW++ L +P+ VK +A E++ Q + ++ +
Sbjct: 271 IVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEIEEFPAQLNYN-NVMDEMPFA 328
Query: 254 RLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFW 313
ES+R P P L++ R + DV G Y VP G I S H +
Sbjct: 329 ERCARESIRRDP-PLLMLMRKVMADVKVGSYV-------VPKGDIIACSPLLSHHDEEAF 380
Query: 314 DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQ 373
P ++PER D +EG AF+GFG G KC+G +
Sbjct: 381 PEPRRWDPER------DEKVEG----------------------AFIGFGAGVHKCIGQK 412
Query: 374 FAVMESTVGLAMLLQKFDIEL 394
F +++ LA + +D +L
Sbjct: 413 FGLLQVKTILATAFRSYDFQL 433
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 41/201 (20%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQA---EVDSVLGQKKPTFESLKKLEYI 253
++ + AG T++ TW++ L +P+ VK +A E++ Q + ++ +
Sbjct: 271 IVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEIEEFPAQLNYN-NVMDEMPFA 328
Query: 254 RLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFW 313
ES+R P P L++ R + DV G Y VP G I S H +
Sbjct: 329 ERCARESIRRDP-PLLMLMRKVMADVKVGSYV-------VPKGDIIACSPLLSHHDEEAF 380
Query: 314 DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQ 373
P ++PER D +EG AF+GFG G KC+G +
Sbjct: 381 PEPRRWDPER------DEKVEG----------------------AFIGFGAGVHKCIGQK 412
Query: 374 FAVMESTVGLAMLLQKFDIEL 394
F +++ LA + +D +L
Sbjct: 413 FGLLQVKTILATAFRSYDFQL 433
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 41/201 (20%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQA---EVDSVLGQKKPTFESLKKLEYI 253
++ + AG T++ TW++ L +P+ VK +A E++ Q + ++ +
Sbjct: 259 IVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEIEEFPAQLNYN-NVMDEMPFA 316
Query: 254 RLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFW 313
ES+R P P L++ R + DV G Y VP G I S H +
Sbjct: 317 ERCARESIRRDP-PLLMLMRKVMADVKVGSYV-------VPKGDIIACSPLLSHHDEEAF 368
Query: 314 DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQ 373
P ++PER D +EG AF+GFG G KC+G +
Sbjct: 369 PEPRRWDPER------DEKVEG----------------------AFIGFGAGVHKCIGQK 400
Query: 374 FAVMESTVGLAMLLQKFDIEL 394
F +++ LA + +D +L
Sbjct: 401 FGLLQVKTILATAFRSYDFQL 421
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 41/201 (20%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQA---EVDSVLGQKKPTFESLKKLEYI 253
++ + AG T++ TW++ L +P+ VK +A E++ Q + ++ +
Sbjct: 258 IVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEIEEFPAQLNYN-NVMDEMPFA 315
Query: 254 RLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFW 313
ES+R P P L++ R + DV G Y VP G I S H +
Sbjct: 316 ERCARESIRRDP-PLLMLMRKVMADVKVGSYV-------VPKGDIIACSPLLSHHDEEAF 367
Query: 314 DRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQ 373
P ++PER D +EG AF+GFG G KC+G +
Sbjct: 368 PEPRRWDPER------DEKVEG----------------------AFIGFGAGVHKCIGQK 399
Query: 374 FAVMESTVGLAMLLQKFDIEL 394
F +++ LA + +D +L
Sbjct: 400 FGLLQVKTILATAFRSYDFQL 420
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 54/204 (26%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESL 247
+DD +LR + T+L+AG+ETT L A++ AQ+P + K +
Sbjct: 238 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK----------------- 280
Query: 248 KKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLH 307
+ E V E LR P P+ R D G R +P GT +F+ + H
Sbjct: 281 ENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVR-------IPTGTPVFMCAHVAH 333
Query: 308 RSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPR 367
R P + + +RF D+ ++ + PS + FGGGP
Sbjct: 334 RDPRVFA-----DADRF-----DITVKREA---PS-----------------IAFGGGPH 363
Query: 368 KCVGDQFAVMESTVGLAMLLQKFD 391
C+G A +E T +A L + D
Sbjct: 364 FCLGTALARLELTEAVAALATRLD 387
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 54/204 (26%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESL 247
+DD +LR + T+L+AG+ETT L A++ AQ+P + K +
Sbjct: 228 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK----------------- 270
Query: 248 KKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLH 307
+ E V E LR P P+ R D G R +P GT +F+ + H
Sbjct: 271 ENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVR-------IPTGTPVFMCAHVAH 323
Query: 308 RSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPR 367
R P + + +RF D+ ++ + PS + FGGGP
Sbjct: 324 RDPRVFA-----DADRF-----DITVKREA---PS-----------------IAFGGGPH 353
Query: 368 KCVGDQFAVMESTVGLAMLLQKFD 391
C+G A +E T +A L + D
Sbjct: 354 FCLGTALARLELTEAVAALATRLD 377
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 74/201 (36%), Gaps = 57/201 (28%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+LIAGHETT ++ A + + P + A+ G + ++ E
Sbjct: 253 LLIAGHETTVNLIANAALAMLRTPGQWAALAAD-----GSRASA------------VIEE 295
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
++R Y P L+ R D+ G + VP G + L + HR P P F
Sbjct: 296 TMR-YDPPVQLVSRYAGDDLTIGTHT-------VPKGDTMLLLLAAAHRDPTIVGAPDRF 347
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
+P+R + LGFG G C+G A +E+
Sbjct: 348 DPDR-------------------------------AQIRHLGFGKGAHFCLGAPLARLEA 376
Query: 380 TVGLAMLLQKF-DIELKGSPE 399
TV L L +F + L G PE
Sbjct: 377 TVALPALAARFPEARLSGEPE 397
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 87/231 (37%), Gaps = 59/231 (25%)
Query: 161 EKLQSRDYSNLKDASLLRFLVDMRGAD-VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLL 219
E +Q R +D ++ L+ R D + + + + + IAGHETT +++ +V L
Sbjct: 193 ELIQKRKRHPQQD--MISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCL 250
Query: 220 AQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDV 279
Q+P ++ K + D I V E LR Y P + R D+
Sbjct: 251 LQHPEQLLKLRENPD-----------------LIGTAVEECLR-YESPTQMTARVASEDI 292
Query: 280 LPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGF 339
D G + G ++L + +R P + P DV F
Sbjct: 293 -------DICGVTIRQGEQVYLLLGAANRDPSIFTNP-------------DV-------F 325
Query: 340 DPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
D +RSP L FG G C+G A +E+ + + LLQ+
Sbjct: 326 DITRSPNP-----------HLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 56/200 (28%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AGHETT ++ ++ L +P ++ +A++ + G + + L Y + +
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVE------EMLRYEGPVESA 313
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
+ R +P P+ D DG +PAG + + + + HR+P + PH F
Sbjct: 314 TYR-FPVEPV-----------------DLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
+ R+D L FG G C+G A +E+
Sbjct: 356 DI------RRDTA-------------------------GHLAFGHGIHFCIGAPLARLEA 384
Query: 380 TVGLAMLLQKF-DIELKGSP 398
+ + LL++ D+ L SP
Sbjct: 385 RIAVRALLERCPDLALDVSP 404
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 56/200 (28%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AGHETT ++ ++ L +P ++ +A++ + G + + L Y + +
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVE------EMLRYEGPVESA 313
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
+ R +P P+ D DG +PAG + + + + HR+P + PH F
Sbjct: 314 TYR-FPVEPV-----------------DLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
+ R+D L FG G C+G A +E+
Sbjct: 356 DI------RRDTA-------------------------GHLAFGHGIHFCIGAPLARLEA 384
Query: 380 TVGLAMLLQKF-DIELKGSP 398
+ + LL++ D+ L SP
Sbjct: 385 RIAVRALLERCPDLALDVSP 404
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 56/200 (28%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AGHETT ++ ++ L +P ++ +A++ + G + + L Y + +
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVE------EMLRYEGPVESA 313
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
+ R +P P+ D DG +PAG + + + + HR+P + PH F
Sbjct: 314 TYR-FPVEPV-----------------DLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
+ R+D L FG G C+G A +E+
Sbjct: 356 DI------RRDTA-------------------------GHLAFGHGIHFCIGAPLARLEA 384
Query: 380 TVGLAMLLQKF-DIELKGSP 398
+ + LL++ D+ L SP
Sbjct: 385 RIAVRALLERCPDLALDVSP 404
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 237 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 279
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 280 LCRYHTASALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 332
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 333 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 363
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 364 TTVFSTLYQKF 374
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 278
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 279 LCRYHTASALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 331
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 332 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 362
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 363 TTVFSTLYQKF 373
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 278 LCRYHTASALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 330
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 331 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 361
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 362 TTVFSTLYQKF 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 278 LCRYHTASALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 330
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 331 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 361
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 362 TTVFSTLYQKF 372
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 278 LCRYHTATALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 330
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 331 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 361
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 362 TTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 278
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 279 LCRYHTATALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 331
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 332 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 362
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 363 TTVFSTLYQKF 373
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 278
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 279 LCRYHTASALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 331
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 332 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 362
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 363 TTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 278 LCRYHTAVALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 330
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 331 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 361
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 362 TTVFSTLYQKF 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 278
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 279 LCRYHTAVALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 331
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 332 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 362
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 363 TTVFSTLYQKF 373
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 46/206 (22%)
Query: 185 GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTF 244
G + D+ + ++ +L+A E L ++ L NP +++ VL +
Sbjct: 251 GMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPE-------QMNDVLADRS--- 300
Query: 245 ESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIY 304
+ +AE+LR P P LI R + D + GG KD T +F I
Sbjct: 301 -------LVPRAIAETLRYKP-PVQLIPRQLSQDTVVGGMEIKKD-------TIVFCMIG 345
Query: 305 NLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGG 364
+R P +++P F R +D+GI+ S F S A + L FG
Sbjct: 346 AANRDPEAFEQPDVFNIHR-----EDLGIK--SAF----SGAARH----------LAFGS 384
Query: 365 GPRKCVGDQFAVMESTVGLAMLLQKF 390
G CVG FA E + ++L K
Sbjct: 385 GIHNCVGTAFAKNEIEIVANIVLDKM 410
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 72/191 (37%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNANMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 278 LCRYHTASALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 330
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 331 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 361
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 362 TTVFSTLYQKF 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 72/191 (37%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNAVMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 278 LCRYHTASALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 330
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 331 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 361
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 362 TTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 72/191 (37%), Gaps = 53/191 (27%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNAAMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPHEF 319
R + L I+RT K DV+ GDK V A I S + +R ++ P EF
Sbjct: 278 LCRYHTASALAIKRTAKEDVM----IGDKL---VRANEGIIASNQSANRDEEVFENPDEF 330
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
R W DP LGFG G +C+ + A E
Sbjct: 331 NMNR-----------KWPPQDP------------------LGFGFGDHRCIAEHLAKAEL 361
Query: 380 TVGLAMLLQKF 390
T + L QKF
Sbjct: 362 TTVFSTLYQKF 372
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 56/207 (27%)
Query: 196 DLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRL 255
+++ +++ G++TT +T V L +NP + K +A P +
Sbjct: 258 NVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKA---------NPAL--------VET 300
Query: 256 IVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDR 315
+V E +R + P +RRT D G G + G + + Y+ +R DR
Sbjct: 301 MVPEIIR-WQTPLAHMRRTAIADSELG-------GKTIRKGDKVVMWYYSGNRDDEVIDR 352
Query: 316 PHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFA 375
P EF +R +PR+ L FG G +CVG++ A
Sbjct: 353 PEEFIIDR-PRPRQ-----------------------------HLSFGFGIHRCVGNRLA 382
Query: 376 VMESTVGLAMLLQKFD-IELKGSPESV 401
M+ + +L +F IE+ PE V
Sbjct: 383 EMQLRILWEEILTRFSRIEVMAEPERV 409
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 84/220 (38%), Gaps = 57/220 (25%)
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
+ G +DD+ + + + AGH+TT++ A+ L++NP ++ A A+ D L
Sbjct: 247 LDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQL--ALAKSDPAL----- 299
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
I +V E++R + P RT D + G + G I LS
Sbjct: 300 ----------IPRLVDEAVR-WTAPVKSFMRTALADT-------EVRGQNIKRGDRIMLS 341
Query: 303 IYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGF 362
+ +R + P EF+ RF P+R LGF
Sbjct: 342 YPSANRDEEVFSNPDEFDITRF----------------PNRH---------------LGF 370
Query: 363 GGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSPESV 401
G G C+G A +E + LL K +EL G P V
Sbjct: 371 GWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPPRLV 410
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 78/211 (36%), Gaps = 54/211 (25%)
Query: 180 LVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ 239
L ++ G +DD + + +L+AGH TT +L V L ++P+ A +
Sbjct: 218 LAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG----- 272
Query: 240 KKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDI 299
I IV E LR P P + R T K + G P+PA +
Sbjct: 273 ------------RIPAIVEEVLRYRPPFPQMQRTTTK--------ATEVAGVPIPADVMV 312
Query: 300 FLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAF 359
+ + +R D P F+P R +S GA A
Sbjct: 313 NTWVLSANRDSDAHDDPDRFDPSR-------------------KSGGA----------AQ 343
Query: 360 LGFGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
L FG G C+G A +E+ V L ++ +F
Sbjct: 344 LSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 78/211 (36%), Gaps = 54/211 (25%)
Query: 180 LVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ 239
L ++ G +DD + + +L+AGH TT +L V L ++P+ A +
Sbjct: 238 LAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG----- 292
Query: 240 KKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDI 299
I IV E LR P P + R T K + G P+PA +
Sbjct: 293 ------------RIPAIVEEVLRYRPPFPQMQRTTTK--------ATEVAGVPIPADVMV 332
Query: 300 FLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAF 359
+ + +R D P F+P R +S GA A
Sbjct: 333 NTWVLSANRDSDAHDDPDRFDPSR-------------------KSGGA----------AQ 363
Query: 360 LGFGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
L FG G C+G A +E+ V L ++ +F
Sbjct: 364 LSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 83/215 (38%), Gaps = 65/215 (30%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNP---SKVKKAQAEVDSVLGQKKPTF 244
+DD L D +LI G+ETT +T AV LA P + ++ A+VD+V
Sbjct: 241 IDDVLLNCD--NVLIGGNETTRHAITGAVHALATVPGLLTALRDGSADVDTV-------- 290
Query: 245 ESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIY 304
V E LR + P + + R DV +G +P+GT + +
Sbjct: 291 ------------VEEVLR-WTSPAMHVLRVTTADVT-------INGRDLPSGTPVVAWLP 330
Query: 305 NLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGG 364
+R P +D P F P R KP + + FG
Sbjct: 331 AANRDPAEFDDPDTFLPGR--KPNR-----------------------------HITFGH 359
Query: 365 GPRKCVGDQFAVMESTVGLAMLLQKFD-IELKGSP 398
G C+G A +E +V L +L ++ ++L+ P
Sbjct: 360 GMHHCLGSALARIELSVVLRVLAERVSRVDLEREP 394
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 81/210 (38%), Gaps = 61/210 (29%)
Query: 185 GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSK---VKKAQAEVDSVLGQKK 241
G + D ++ L M+ AGHETT +++ AV L+ +P + V +AE +V
Sbjct: 224 GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAV----- 278
Query: 242 PTFESLKKLEYIRLIVAESLRL-YPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIF 300
V E+LR P +LIR + +P G R +PAG +
Sbjct: 279 ---------------VEETLRFSTPTSHVLIR--FAAEDVPVGDRV------IPAGDALI 315
Query: 301 LSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFL 360
+S L R ER P D FD +R+ G + +
Sbjct: 316 VSYGALGRD------------ERAHGPTAD-------RFDLTRTSGNRH----------I 346
Query: 361 GFGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
FG GP C G + ME+ V L L +F
Sbjct: 347 SFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 255 LIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWD 314
+ V E R YP P L +K D + K GT + L +Y + P WD
Sbjct: 278 MFVQEVRRYYPFGPFL-GALVKKDFVWNNCEFKK-------GTSVLLDLYGTNHDPRLWD 329
Query: 315 RPHEFEPERF 324
P EF PERF
Sbjct: 330 HPDEFRPERF 339
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
+++ +Y L V E R YP P ++ R + + +G P G + L +Y
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARASQD--------FEWEGMAFPEGRQVVLDLYGS 319
Query: 307 HRSPYFWDRPHEFEPERF 324
+ W P EF PERF
Sbjct: 320 NHDAATWADPQEFRPERF 337
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
+++ +Y L V E R YP P ++ R + + +G P G + L +Y
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQD--------FEWEGMAFPEGRQVVLDLYGS 311
Query: 307 HRSPYFWDRPHEFEPERF 324
+ W P EF PERF
Sbjct: 312 NHDAATWADPQEFRPERF 329
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
+++ +Y L V E R YP P ++ R + + +G P G + L +Y
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQD--------FEWEGMAFPEGRQVVLDLYGS 311
Query: 307 HRSPYFWDRPHEFEPERF 324
+ W P EF PERF
Sbjct: 312 NHDAATWADPQEFRPERF 329
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
+++ +Y L V E R YP P ++ R + + +G P G + L +Y
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQD--------FEWEGMAFPEGRQVVLDLYGS 311
Query: 307 HRSPYFWDRPHEFEPERF 324
+ W P EF PERF
Sbjct: 312 NHDAATWADPQEFRPERF 329
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
+++ +Y L V E R YP P ++ R + + +G P G + L +Y
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQD--------FEWEGMAFPEGRQVVLDLYGS 319
Query: 307 HRSPYFWDRPHEFEPERF 324
+ W P EF PERF
Sbjct: 320 NHDAATWADPQEFRPERF 337
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNL 306
+++ +Y L V E R YP P ++ R + + +G P G + L +Y
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQD--------FEWEGMAFPEGRQVVLDLYGS 319
Query: 307 HRSPYFWDRPHEFEPERF 324
+ W P EF PERF
Sbjct: 320 NHDAATWADPQEFRPERF 337
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 79/212 (37%), Gaps = 57/212 (26%)
Query: 192 QLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLE 251
+LRD L+ M+ AG+ETT V+ AV L P ++ +++ + + T+
Sbjct: 231 ELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQL--------ALVRKGEVTWAD----- 277
Query: 252 YIRLIVAESLRLYPQPPLLIRRTIKPDV-LPGGYRGDKDGYPVPAGTDIFLSIYNLHRSP 310
+V E+LR P L R D+ LP DG + G I S +R P
Sbjct: 278 ----VVEETLRHEPAVKHLPLRYAVTDIALP-------DGRTIARGEPILASYAAANRHP 326
Query: 311 YFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCV 370
+ + F+ R +K L FG G C+
Sbjct: 327 DWHEDADTFDATRTVK-------------------------------EHLAFGHGVHFCL 355
Query: 371 GDQFAVMESTVGLAMLLQKF-DIELKGSPESV 401
G A ME T+ L L +F D+ L E +
Sbjct: 356 GAPLARMEVTLALESLFGRFPDLRLADPAEEL 387
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 38/167 (22%)
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
T +++K+E + +V E LR P R K V+ + V AG ++
Sbjct: 337 TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVI----ESHDAAFKVKAGEMLYGY 392
Query: 303 IYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEG--------WSGFDPSRSPGALYPNEIV 354
R P +DR EF PERF VG EG WS + +P
Sbjct: 393 QPLATRDPKIFDRADEFVPERF------VGEEGEKLLRHVLWSNGPETETPTV------- 439
Query: 355 SDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQK---FDIELKGSP 398
G ++C G F V+ + + + + ++ FDIE+ SP
Sbjct: 440 ----------GNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSP 476
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 38/167 (22%)
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
T +++K+E + +V E LR P R K V+ + V AG ++
Sbjct: 337 TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVI----ESHDAAFKVKAGEMLYGY 392
Query: 303 IYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEG--------WSGFDPSRSPGALYPNEIV 354
R P +DR EF PERF VG EG WS + +P
Sbjct: 393 QPLATRDPKIFDRADEFVPERF------VGEEGEKLLRHVLWSNGPETETPTV------- 439
Query: 355 SDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQK---FDIELKGSP 398
G ++C G F V+ + + + + ++ FDIE+ SP
Sbjct: 440 ----------GNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSP 476
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 21/83 (25%)
Query: 320 EPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMES 379
+P +F +PRK FDP+R P + L FG G +C+G A +E
Sbjct: 370 DPAQFPEPRK---------FDPTR-PANRH----------LAFGAGSHQCLGLHLARLEM 409
Query: 380 TVGLAMLLQKFD-IELKGSPESV 401
V L +LL + D +EL G P+ V
Sbjct: 410 RVLLDVLLDRVDSLELAGEPKRV 432
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 77/208 (37%), Gaps = 39/208 (18%)
Query: 193 LRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEY 252
L D L+ AG T + + + A + A + ++ F + + E
Sbjct: 203 LADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES 262
Query: 253 IRL-IVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPY 311
R I+ E +R+ P P L R DV GG + AG+ I I +R P
Sbjct: 263 ARAAIINEMVRMDP-PQLSFLRFPTEDVEIGGVL-------IEAGSPIRFMIGAANRDPE 314
Query: 312 FWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVG 371
+D P DV FD +R P A L FG GP C G
Sbjct: 315 VFDDP-------------DV-------FDHTRPPAA---------SRNLSFGLGPHSCAG 345
Query: 372 DQFAVMESTVGLAMLLQKFD-IELKGSP 398
+ E+T A+L ++++ IEL P
Sbjct: 346 QIISRAEATTVFAVLAERYERIELAEEP 373
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 77/208 (37%), Gaps = 39/208 (18%)
Query: 193 LRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEY 252
L D L+ AG T + + + A + A + ++ F + + E
Sbjct: 205 LADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES 264
Query: 253 IRL-IVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPY 311
R I+ E +R+ P P L R DV GG + AG+ I I +R P
Sbjct: 265 ARAAIINEMVRMDP-PQLSFLRFPTEDVEIGGVL-------IEAGSPIRFMIGAANRDPE 316
Query: 312 FWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVG 371
+D P DV FD +R P A L FG GP C G
Sbjct: 317 VFDDP-------------DV-------FDHTRPPAA---------SRNLSFGLGPHSCAG 347
Query: 372 DQFAVMESTVGLAMLLQKFD-IELKGSP 398
+ E+T A+L ++++ IEL P
Sbjct: 348 QIISRAEATTVFAVLAERYERIELAEEP 375
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 36/279 (12%)
Query: 135 NDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLR----------FLVDMR 184
+ + ++ L L R + + + ++SR + L A L R +L+ +
Sbjct: 195 HTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSKWLESYLLHLE 254
Query: 185 GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
V + L+ L A W + L +NP + + E++S+L Q ++P
Sbjct: 255 EMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPV 314
Query: 244 FES-------LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAG 296
++ L + +++ESLRL P + R + +P D + + G
Sbjct: 315 SQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMP---MADGREFNLRRG 370
Query: 297 TDIFL-SIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVS 355
+ L + R P + P F+ RFL P D S + +
Sbjct: 371 DRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP------------DGSEKKDFYKDGKRLK 418
Query: 356 DYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIEL 394
+Y + +G G C+G +AV + ++L D+EL
Sbjct: 419 NYN-MPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLEL 456
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 36/279 (12%)
Query: 135 NDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLR----------FLVDMR 184
+ + ++ L L R + + + ++SR + L A L R +L+ +
Sbjct: 183 HTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSKWLESYLLHLE 242
Query: 185 GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
V + L+ L A W + L +NP + + E++S+L Q ++P
Sbjct: 243 EMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPV 302
Query: 244 FES-------LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAG 296
++ L + +++ESLRL P + R + +P D + + G
Sbjct: 303 SQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMP---MADGREFNLRRG 358
Query: 297 TDIFL-SIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVS 355
+ L + R P + P F+ RFL P D S + +
Sbjct: 359 DRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP------------DGSEKKDFYKDGKRLK 406
Query: 356 DYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIEL 394
+Y + +G G C+G +AV + ++L D+EL
Sbjct: 407 NYN-MPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLEL 444
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 71/205 (34%), Gaps = 56/205 (27%)
Query: 186 ADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFE 245
D+D ++ + +L+AGHETT + L Q+P ++ + +V G
Sbjct: 226 GDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVSG------- 278
Query: 246 SLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYN 305
+V E LR ++R K D+ GG + AG + +SI
Sbjct: 279 ----------VVEELLRFTSVSDHIVRMA-KEDIEVGGAT-------IKAGDAVLVSITL 320
Query: 306 LHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGG 365
++R ++ P F+ R + +GFG G
Sbjct: 321 MNRDAKAYENPDIFDARRNAR-------------------------------HHVGFGHG 349
Query: 366 PRKCVGDQFAVMESTVGLAMLLQKF 390
+C+G A E + L L +
Sbjct: 350 IHQCLGQNLARAELEIALGGLFARI 374
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG 238
+ ++D +L M +LIAGHETTA++ + +V L +P + +A+ V G
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 71/203 (34%), Gaps = 55/203 (27%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESL 247
VDD L + T+LIA H+TTA ++ LL +P ++ + E S++G
Sbjct: 222 VDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLR-EDPSLVGNA------- 273
Query: 248 KKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLH 307
V E LR R DV GG R + G + +
Sbjct: 274 ---------VEELLRYLTIGQFGGERVATRDVELGGVR-------IAKGEQVVAHVLAAD 317
Query: 308 RSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPR 367
P F + EPER FD +R P L FG G
Sbjct: 318 FDPAFVE-----EPER---------------FDITRRPA-----------PHLAFGFGAH 346
Query: 368 KCVGDQFAVMESTVGLAMLLQKF 390
+C+G Q A +E + L ++
Sbjct: 347 QCIGQQLARIELQIVFETLFRRL 369
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 71/203 (34%), Gaps = 55/203 (27%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESL 247
VDD L + T+LIA H+TTA ++ LL +P ++ + E S++G
Sbjct: 222 VDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLR-EDPSLVGNA------- 273
Query: 248 KKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLH 307
V E LR R DV GG R + G + +
Sbjct: 274 ---------VEELLRYLTIGQFGGERVATRDVELGGVR-------IAKGEQVVAHVLAAD 317
Query: 308 RSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPR 367
P F + EPER FD +R P L FG G
Sbjct: 318 FDPAFVE-----EPER---------------FDITRRPA-----------PHLAFGFGAH 346
Query: 368 KCVGDQFAVMESTVGLAMLLQKF 390
+C+G Q A +E + L ++
Sbjct: 347 QCIGQQLARIELQIVFETLFRRL 369
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG 238
+ ++D +L M +LIAGHETTA++ + +V L +P + +A+ V G
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 75/200 (37%), Gaps = 59/200 (29%)
Query: 199 TMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVA 258
++L AG +TT + AV+ LA+ P + + +A D L + FE + E
Sbjct: 247 SLLSAGLDTTVNGIAAAVYCLARFPDEFARLRA--DPSLARN--AFEEAVRFE------- 295
Query: 259 ESLRLYPQPPLLIRRTIKPDV-LPGGYRGDKDGYPVPAGTDIFLSIYNLHRSPYFWDRPH 317
P RT DV L G G+ G + + + + +R P WD
Sbjct: 296 -------SPVQTFFRTTTRDVELAGATIGE--------GEKVLMFLGSANRDPRRWD--- 337
Query: 318 EFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVM 377
+P+R+ RK G +GFG G CVG A +
Sbjct: 338 --DPDRYDITRKTSG--------------------------HVGFGSGVHMCVGQLVARL 369
Query: 378 ESTVGLAMLLQKF-DIELKG 396
E V LA L +K IE+ G
Sbjct: 370 EGEVVLAALARKVAAIEIAG 389
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG 238
+ ++D +L M +LIAGHETTA++ + +V L +P + +A+ V G
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG 238
+ ++D +L M +LIAGHETTA++ + +V L +P + +A+ V G
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 71/203 (34%), Gaps = 55/203 (27%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESL 247
VDD L + T+LIA H+TTA ++ LL +P ++ + E S++G
Sbjct: 222 VDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLR-EDPSLVGNA------- 273
Query: 248 KKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSIYNLH 307
V E LR R DV GG R + G + +
Sbjct: 274 ---------VEELLRYLTIGQFGGERVATRDVELGGVR-------IAKGEQVVAHVLAAD 317
Query: 308 RSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPR 367
P F + EPER FD +R P L FG G
Sbjct: 318 FDPAFVE-----EPER---------------FDITRRPA-----------PHLAFGFGAH 346
Query: 368 KCVGDQFAVMESTVGLAMLLQKF 390
+C+G Q A +E + L ++
Sbjct: 347 QCIGQQLARIELQIVFETLFRRL 369
>pdb|3UCP|A Chain A, Outer Membrane Endecaheme Cytochrome Unda From Shewanella
Sp. Hrcr-6
pdb|3UFH|A Chain A, Crystal Structure Of Unda With Iron Citrate Bound
pdb|3UFK|A Chain A, Crystal Structure Of Unda Complexed With Iron
Nitrilotriacetate
Length = 874
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 34/140 (24%)
Query: 52 EGEDSRG-----------GNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAV 100
+G+DS G G++I+ ++E+ + L ++ GV+ Y F + P I+
Sbjct: 137 DGKDSAGNPITKEVKFTPGDAIQANIESSCKTTCLTVVDSGVYRYTFQTNLSTLPAIEG- 195
Query: 101 YGTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQNDLKIINDCLDGL----IRNAKETRQ 156
+ Y + R + Q D K++N +D L R AKET
Sbjct: 196 ------------LDLTYDPTLIHRITLELQTDGSKDAKLVNSHIDFLPSDNFRVAKETET 243
Query: 157 ETDVE------KLQSRDYSN 170
T V+ K S +YS+
Sbjct: 244 RTVVDLEANCIKCHSTNYSD 263
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 84/223 (37%), Gaps = 69/223 (30%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQK 240
AD+D +L DD ++ + +AG+ETT +T + AQNP + + + ++
Sbjct: 229 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNPDQWE--------LYKKE 280
Query: 241 KPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIF 300
+P A+ + + P +RT DV GG + + G +
Sbjct: 281 RPE------------TAADEIVRWATPVSAFQRTALEDVELGGVQ-------IKKGQRVV 321
Query: 301 LSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDYAFL 360
+S R F+ E F P F+ RSP +
Sbjct: 322 MSY-----------RSANFDEEVFEDPHT---------FNILRSPN-----------PHV 350
Query: 361 GFGG-GPRKCVGDQFAVMESTVGL---AMLLQKFDIELKGSPE 399
GFGG G C+G A M T+ L A+ D++ G+PE
Sbjct: 351 GFGGTGAHYCIGANLARM--TINLIFNAIADNMPDLKPIGAPE 391
>pdb|3Q3Y|A Chain A, Complex Structure Of Hevb Ev93 Main Protease 3c With
Compound 1 (Ag7404)
pdb|3Q3Y|B Chain B, Complex Structure Of Hevb Ev93 Main Protease 3c With
Compound 1 (Ag7404)
pdb|3RUO|A Chain A, Complex Structure Of Hevb Ev93 Main Protease 3c With
Rupintrivir (Ag7088)
pdb|3RUO|B Chain B, Complex Structure Of Hevb Ev93 Main Protease 3c With
Rupintrivir (Ag7088)
Length = 191
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 296 GTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGI-EGWSGFDPSRSPGALYPNEIV 354
GT++ L++ L+R+ F D R R++V + E + S+ P P V
Sbjct: 69 GTNLELTLLKLNRNEKFRDI-------RGFLAREEVEVNEAVLAINTSKFPNMYIPVGQV 121
Query: 355 SDYAFLGFGGGPRK 368
+DY FL GG P K
Sbjct: 122 TDYGFLNLGGTPTK 135
>pdb|3Q3X|A Chain A, Crystal Structure Of The Main Protease (3c) From Human
Enterovirus B Ev93
pdb|3Q3X|B Chain B, Crystal Structure Of The Main Protease (3c) From Human
Enterovirus B Ev93
Length = 191
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 296 GTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGI-EGWSGFDPSRSPGALYPNEIV 354
GT++ L++ L+R+ F D R R++V + E + S+ P P V
Sbjct: 69 GTNLELTLLKLNRNEKFRDI-------RGFLAREEVEVNEAVLAINTSKFPNMYIPVGQV 121
Query: 355 SDYAFLGFGGGPRK 368
+DY FL GG P K
Sbjct: 122 TDYGFLNLGGTPTK 135
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 149 RNAKETRQETDVEKLQSRDYSNLKDASLLRFLV--DMRGADVDDRQLRDDLMTMLIAGHE 206
+NA + + L R + DA L L DM G + +L M +LIAGHE
Sbjct: 180 KNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHE 239
Query: 207 TTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTF 244
TT ++ V L +P + +K AE S++ F
Sbjct: 240 TTVNLIGNGVLALLTHPDQ-RKLLAEDPSLISSAVEEF 276
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 86/218 (39%), Gaps = 58/218 (26%)
Query: 174 ASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEV 233
+SL+ VD G + R++ + +++AG+ETT +T V L++ P + + ++
Sbjct: 247 SSLVEAEVD--GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDF 304
Query: 234 DSVLGQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPV 293
D + PT E + + P + +RRT+ D+ RG K +
Sbjct: 305 DGL----APT-------------AVEEIVRWASPVVYMRRTLTQDI---ELRGTK----M 340
Query: 294 PAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEI 353
AG + L + +R + +F P W+ FD +R+P
Sbjct: 341 AAGDKVSLWYCSANR-----------DESKFADP--------WT-FDLARNPN------- 373
Query: 354 VSDYAFLGF-GGGPRKCVGDQFAVMESTVGLAMLLQKF 390
LGF GGG C+G A E V L ++
Sbjct: 374 ----PHLGFGGGGAHFCLGANLARREIRVAFDELRRQM 407
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 360 LGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPES 400
LGFG G C+G A +E V L +LLQ+ G PE+
Sbjct: 357 LGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET 397
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 360 LGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPES 400
LGFG G C+G A +E V L +LLQ+ G PE+
Sbjct: 357 LGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET 397
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 360 LGFGGGPRKCVGDQFAVMESTVGLAMLLQKFDIELKGSPES 400
LGFG G C+G A +E V L +LLQ+ G PE+
Sbjct: 357 LGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET 397
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 77/213 (36%), Gaps = 61/213 (28%)
Query: 183 MRGADVDDRQLRDDLMT-----MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVL 237
+R D DD +L D +T +L+AG ET+ +++ +LL +P ++ L
Sbjct: 216 IRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPDQL---------AL 266
Query: 238 GQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGT 297
++ P+ + V E LR Y PP R +V G G +P +
Sbjct: 267 VRRDPS--------ALPNAVEEILR-YIAPPETTTRFAAEEVEIG-------GVAIPQYS 310
Query: 298 DIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYPNEIVSDY 357
+ ++ +R P + PH F+ R +
Sbjct: 311 TVLVANGAANRDPKQFPDPHRFDVTRDTR------------------------------- 339
Query: 358 AFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
L FG G C+G A +E V L L +F
Sbjct: 340 GHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|2X4G|A Chain A, Crystal Structure Of Pa4631, A
Nucleoside-Diphosphate-Sugar Epimerase From Pseudomonas
Aeruginosa
Length = 342
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 203 AGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAESLR 262
AG E L +F PS+ ++ Q EV S LGQ P + + + R++ S
Sbjct: 69 AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY 128
Query: 263 LYPQPP 268
P+ P
Sbjct: 129 AMPRHP 134
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
FGGGP +C G A ME V L L++
Sbjct: 357 FGGGPHRCAGMHLARMEVIVTLEEWLKRI 385
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 362 FGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
FGGGP +C G A ME V L L++
Sbjct: 392 FGGGPHRCAGMHLARMEVIVTLEEWLKRI 420
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 79/220 (35%), Gaps = 63/220 (28%)
Query: 176 LLRFLVDMRGADVDDRQLRDDLMT-----MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQ 230
LL L+ ++ D DD +L D +T +L+AG E + +++ +LL +P ++ +
Sbjct: 210 LLSALISVQ--DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVR 267
Query: 231 AEVDSVLGQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDG 290
A+ ++ V E LR Y PP R +V G G
Sbjct: 268 ADPSALPNA-----------------VEEILR-YIAPPETTTRFAAEEVEIG-------G 302
Query: 291 YPVPAGTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGIEGWSGFDPSRSPGALYP 350
+P + + ++ +R P + PH F+ R +
Sbjct: 303 VAIPQYSTVLVANGAANRDPSQFPDPHRFDVTRDTR------------------------ 338
Query: 351 NEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
L FG G C+G A +E V L L +F
Sbjct: 339 -------GHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 340 DPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSP 398
DP R PN VS FG GP C G A +ES + + +L + ++L +P
Sbjct: 330 DPDRIDFERSPNPHVS------FGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 399 ESVELVTGATIHTKNGL 415
E V GA I L
Sbjct: 384 EDVPFKKGALIRGPEAL 400
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 340 DPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSP 398
DP R PN VS FG GP C G A +ES + + +L + ++L +P
Sbjct: 330 DPDRIDFERSPNPHVS------FGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 399 ESVELVTGATIHTKNGL 415
E V GA I L
Sbjct: 384 EDVPFKKGALIRGPEAL 400
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 340 DPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSP 398
DP R PN VS FG GP C G A +ES + + +L + ++L +P
Sbjct: 330 DPDRIDFERSPNPHVS------FGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 399 ESVELVTGATIHTKNGL 415
E V GA I L
Sbjct: 384 EDVPFKKGALIRGPEAL 400
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 340 DPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSP 398
DP R PN VS FG GP C G A +ES + + +L + ++L +P
Sbjct: 330 DPDRIDFERSPNPHVS------FGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 399 ESVELVTGATIHTKNGL 415
E V GA I L
Sbjct: 384 EDVPFKKGALIRGPEAL 400
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 340 DPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSP 398
DP R PN VS FG GP C G A +ES + + +L + ++L +P
Sbjct: 330 DPDRIDFERSPNPHVS------FGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 399 ESVELVTGATIHTKNGL 415
E V GA I L
Sbjct: 384 EDVPFKKGALIRGPEAL 400
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 340 DPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSP 398
DP R PN VS FG GP C G A +ES + + +L + ++L +P
Sbjct: 330 DPDRIDFERSPNPHVS------FGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 399 ESVELVTGATIHTKNGL 415
E V GA I L
Sbjct: 384 EDVPFKKGALIRGPEAL 400
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 340 DPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSP 398
DP R PN VS FG GP C G A +ES + + +L + ++L +P
Sbjct: 330 DPDRIDFERSPNPHVS------FGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 399 ESVELVTGATIHTKNGL 415
E V GA I L
Sbjct: 384 EDVPFKKGALIRGPEAL 400
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 358 AFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSP 398
A L +G GP C G A +E+ + + + ++F +++LK +P
Sbjct: 354 ASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP 395
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 358 AFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF-DIELKGSP 398
A L +G GP C G A +E+ + + + ++F +++LK +P
Sbjct: 354 ASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP 395
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 25/165 (15%)
Query: 238 GQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGT 297
G T E+++++ + +V ESLR+ P P + + + V G
Sbjct: 315 GDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTI----ESHDATFEVKKGE 370
Query: 298 DIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKD-VGIEGWSGFDPSRSPGALYPNEIVSD 356
+F + P +DRP E+ P+RF+ + + WS + SP V +
Sbjct: 371 MLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESP-------TVEN 423
Query: 357 YAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKFD---IELKGSP 398
++C G F V+ + + + L +++D IEL SP
Sbjct: 424 ----------KQCAGKDFVVLITRLFVIELFRRYDSFEIELGESP 458
>pdb|2OUH|A Chain A, Crystal Structure Of The Thrombospondin-1 N-Terminal
Domain In Complex With Fractionated Heparin Dp10
pdb|2OUH|B Chain B, Crystal Structure Of The Thrombospondin-1 N-Terminal
Domain In Complex With Fractionated Heparin Dp10
pdb|2OUJ|A Chain A, The Crystal Structure Of The Thrombospondin-1 N-Terminal
Domain In Complex With Fractionated Heparin Dp8
Length = 251
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 103 TLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQNDLKII----------NDCLDGLIRNAK 152
TLF E R+ YI K+ A VP Q F DL I ND G+++N +
Sbjct: 143 TLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVNDNFQGVLQNVR 202
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 355 SDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
+D + FG G +CVG A +E V L LL++
Sbjct: 346 TDNHHVAFGYGVHQCVGQHLARLELEVALETLLRRV 381
>pdb|4DXN|A Chain A, Crystal Structure Of A Reconstructed Kaede-type Red
Fluorescent Protein, Least Evolved Ancestor (lea)
pdb|4DXQ|A Chain A, Crystal Structure Of A Reconstructed Kaede-type Red
Fluorescent Protein, Lea Q38a
Length = 228
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 17/80 (21%)
Query: 288 KDGYPVPAGTDIFLSI--------YNLHRSPYF---------WDRPHEFEPERFLKPRKD 330
K+G P+P DI ++ Y H YF W+R FE R D
Sbjct: 45 KEGAPLPFAYDILTTVFXNRVFAKYPKHIPDYFKQSFPEGYSWERSMTFEDGGICTARND 104
Query: 331 VGIEGWSGFDPSRSPGALYP 350
+ +EG F+ R G +P
Sbjct: 105 ITLEGDCFFNEIRFDGVNFP 124
>pdb|3ZYD|A Chain A, Crystal Structure Of 3c Protease Of Coxsackievirus B3
pdb|3ZZ5|A Chain A, Crystal Structure Of 3c Protease Of Coxsackievirus B3
Complexed With Alpha, Beta-Unsaturated Ethyl Ester
Inhibitor 74
pdb|3ZZ6|A Chain A, Crystal Structure Of 3c Protease Of Coxsackievirus B3
Complexed With Michael Receptor Inhibitor 75
pdb|3ZZ7|A Chain A, Crystal Structure Of 3c Protease Of Coxsackievirus B3
Complexed With Alpha, Beta-Unsaturated Ethyl Ester
Inhibitor 81
pdb|3ZZ8|A Chain A, Crystal Structure Of 3c Protease Of Coxsackievirus B3
Complexed With Alpha, Beta-Unsaturated Ethyl Ester
Inhibitor 82
pdb|3ZZ9|A Chain A, Crystal Structure Of 3c Protease Of Coxsackievirus B3
Complexed With Alpha, Beta-Unsaturated Ethyl Ester
Inhibitor 83
pdb|3ZZA|A Chain A, Crystal Structure Of 3c Protease Of Coxsackievirus B3
Complexed With Alpha, Beta-Unsaturated Ethyl Ester
Inhibitor 84
pdb|3ZZB|A Chain A, Crystal Structure Of 3c Protease Of Coxsackievirus B3
Complexed With Alpha, Beta-Unsaturated Ethyl Ester
Inhibitor 85
Length = 184
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 296 GTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGI-EGWSGFDPSRSPGALYPNEIV 354
GT++ L++ L+R+ F D R +++V + E + S+ P P V
Sbjct: 68 GTNLELTLLKLNRNEKFRDI-------RGFLAKEEVEVNEAVLAINTSKFPNMYIPVGQV 120
Query: 355 SDYAFLGFGGGPRK 368
++Y FL GG P K
Sbjct: 121 TEYGFLNLGGTPTK 134
>pdb|2ZTX|A Chain A, Complex Structure Of Cvb3 3c Protease With Epdtc
pdb|2ZTY|A Chain A, Crystal Structure Of 3c Protease From Cvb3 In Space Group
C2
pdb|2ZTZ|A Chain A, Crystal Structure Of 3c Protease From Cvb3 In Space Group
P21
pdb|2ZTZ|B Chain B, Crystal Structure Of 3c Protease From Cvb3 In Space Group
P21
pdb|2ZU3|A Chain A, Complex Structure Of Cvb3 3c Protease With Tg-0204998
Length = 183
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 296 GTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGI-EGWSGFDPSRSPGALYPNEIV 354
GT++ L++ L+R+ F D R +++V + E + S+ P P V
Sbjct: 67 GTNLELTLLKLNRNEKFRDI-------RGFLAKEEVEVNEAVLAINTSKFPNMYIPVGQV 119
Query: 355 SDYAFLGFGGGPRK 368
++Y FL GG P K
Sbjct: 120 TEYGFLNLGGTPTK 133
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 149 RNAKETRQETDVEKLQSRDYSNLKDASLLRFLV--DMRGADVDDRQLRDDLMTMLIAGHE 206
+NA + + L R + DA L L D G + +L M +LIAGHE
Sbjct: 180 KNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHE 239
Query: 207 TTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTF 244
TT ++ V L +P + +K AE S++ F
Sbjct: 240 TTVNLIGNGVLALLTHPDQ-RKLLAEDPSLISSAVEEF 276
>pdb|2ZU1|A Chain A, Crystal Structure Of Cvb3 3c Protease Mutant C147a
pdb|2ZU1|B Chain B, Crystal Structure Of Cvb3 3c Protease Mutant C147a
Length = 183
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 296 GTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGI-EGWSGFDPSRSPGALYPNEIV 354
GT++ L++ L+R+ F D R +++V + E + S+ P P V
Sbjct: 67 GTNLELTLLKLNRNEKFRDI-------RGFLAKEEVEVNEAVLAINTSKFPNMYIPVGQV 119
Query: 355 SDYAFLGFGGGPRK 368
++Y FL GG P K
Sbjct: 120 TEYGFLNLGGTPTK 133
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 331 VGIEGWSGFDPSRSPGALYPNEIVSDYAFLGFGGGPRKCVGDQFAVMESTVGLAMLLQKF 390
V + G + DP+R P + + +GFG G C+G A E+ +GL LL
Sbjct: 326 VALLGSANRDPARFPDPDVLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGI 385
Query: 391 DIELKGSPE 399
+G+ E
Sbjct: 386 PALGRGAHE 394
>pdb|2VB0|A Chain A, Crystal Structure Of Coxsackievirus B3 Proteinase 3c
Length = 183
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 296 GTDIFLSIYNLHRSPYFWDRPHEFEPERFLKPRKDVGI-EGWSGFDPSRSPGALYPNEIV 354
GT++ L++ L+R+ F D R +++V + E + S+ P P V
Sbjct: 67 GTNLELTLLKLNRNEKFRDI-------RGFLAKEEVEVNEAVLAINTSKFPNMYIPVGQV 119
Query: 355 SDYAFLGFGGGPRK 368
++Y FL GG P K
Sbjct: 120 TEYGFLNLGGTPTK 133
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 244 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 288
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 237 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 281
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 236 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 280
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 253 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 297
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 246 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 290
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,238,088
Number of Sequences: 62578
Number of extensions: 572739
Number of successful extensions: 1667
Number of sequences better than 100.0: 189
Number of HSP's better than 100.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1121
Number of HSP's gapped (non-prelim): 229
length of query: 426
length of database: 14,973,337
effective HSP length: 102
effective length of query: 324
effective length of database: 8,590,381
effective search space: 2783283444
effective search space used: 2783283444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)