BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014374
(426 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/424 (63%), Positives = 319/424 (75%), Gaps = 24/424 (5%)
Query: 5 DNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSLNQG 64
+N+ M FQ ES MNC S GM N F+ W+P+VSLNQ
Sbjct: 7 NNEGMAFQSGGESVMNCQSS-------GMSANP------------FFPPAWDPVVSLNQH 47
Query: 65 ESFGVSSMVSHNEFAPS-YPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSE 123
E+FG +SMVS +EF S Y + +ENQG++S+S+L Y SD S+VELVPK P +GSG+FSE
Sbjct: 48 ENFG-ASMVSQSEFTNSHYAIVMENQGINSSSHLVHYQSDSSYVELVPKFPSYGSGSFSE 106
Query: 124 MVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKT 183
MVSSFGL + QI++SGC PNY N ER N + S EDHQ+ EE +GV+ +GK
Sbjct: 107 MVSSFGLTDCGQISNSGCHPNYTSNSAANNERTITNSALSQEDHQLSEEPVVGVSPDGKR 166
Query: 184 RKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPT 243
RKR E +S + +KN E E+ KDPSG+SS I KEQDEKK + EQNT AN+RGKQAAK
Sbjct: 167 RKRLAEPSSPFDPNKNAE-EMHKDPSGNSSDIPKEQDEKKSRTEQNTAANLRGKQAAKQA 225
Query: 244 KDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
K++S SGEAPKE YIH+RA+RGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA
Sbjct: 226 KENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 285
Query: 303 VMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGM 362
VMLDEIINYVQSLQQQVEFLSMKLATVNPELN+DIERILSKDILH+R G+AA +G S G+
Sbjct: 286 VMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERILSKDILHSRGGNAAIMGLSPGI 345
Query: 363 NSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAVDSLGPNGRL 422
N + PY GIF +P IP NPQFPP+P +VL+++ Q+LFQMG+DS SA+DSLGPNGRL
Sbjct: 346 N-AHPYSHGIFPPNIPVIPNTNPQFPPMPHTVLENDLQNLFQMGFDSGSAIDSLGPNGRL 404
Query: 423 KSEL 426
K EL
Sbjct: 405 KPEL 408
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/434 (63%), Positives = 328/434 (75%), Gaps = 12/434 (2%)
Query: 1 MGAGDNDDMGFQPRNESAMNC-SSGM----MPQKLPGMQMNSVPMYKSVSGPDHFYGSGW 55
MG DN +MGF ++S +NC SSGM + +K+ GM M+S MYKS +G D F+GSGW
Sbjct: 1 MGIDDNGNMGFPNTSQSILNCPSSGMNTHPISEKVTGMTMSSASMYKSSNGGDPFFGSGW 60
Query: 56 EPIVSLNQGESFGVSSMVSHNEFAPS-YPVALENQGMSSTSNLDQYSSDPSFVELVPKIP 114
+PIVSL+Q E+FG SSMVSH+EFA S YPV LENQG+ ST +L Y S+ S VE+VPK+P
Sbjct: 61 DPIVSLSQNENFGGSSMVSHSEFANSAYPVVLENQGIGSTPHLVLYPSNSSLVEMVPKLP 120
Query: 115 GFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAA 174
FGSG+FSEMV+SFGLPE Q A+SGCPPN+ PNKEG E+ S N +QS E HQI E A
Sbjct: 121 CFGSGSFSEMVASFGLPECGQTANSGCPPNFPPNKEGLTEK-SLNGAQSQEGHQISEGDA 179
Query: 175 IGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANM 234
+ + +GK RK + + LNT K+ + E K ++S KEQ+EKK KI+QN N+
Sbjct: 180 VDASPSGKRRKSSFDPRPPLNTSKSADGEQPKGLPWENSEFSKEQEEKKLKIDQNMSPNL 239
Query: 235 RGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVP 293
RGKQ K KD+S +GEAPKE YIH+RA+RGQATNSHSLAERVRREKISERMRLLQELVP
Sbjct: 240 RGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVP 299
Query: 294 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSA 353
GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN+DIER+LSKDIL++R GS
Sbjct: 300 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERLLSKDILNSRGGST 359
Query: 354 ATIGFSSGMNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAV 413
+ +GF GM+SS PYP GI QGT+P IP PQF Q+V D E QSL QMG+DS +
Sbjct: 360 SVLGFGPGMSSSHPYPHGISQGTLPGIP--TPQFHST-QAVWDGELQSLLQMGFDSNPSS 416
Query: 414 DSLGPN-GRLKSEL 426
++LG N GR K EL
Sbjct: 417 NNLGTNAGRSKLEL 430
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/429 (62%), Positives = 311/429 (72%), Gaps = 28/429 (6%)
Query: 2 GAGDND-DMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVS 60
G+GDN+ D+G+Q R ES M C P MN+ P FY S W+P+VS
Sbjct: 3 GSGDNNGDLGYQNRVESVMKC---------PSSGMNTNP----------FYVSAWDPVVS 43
Query: 61 LNQGESFGVSSMVSHNEFAPS-YPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSG 119
L+Q +FG SS S +EF+ S +P+ +EN G+S+T +L Y SD FVELVPK PGFGSG
Sbjct: 44 LSQLGNFGGSSTGSQSEFSNSPFPIVMENPGISNTCHLVHYPSDSGFVELVPKFPGFGSG 103
Query: 120 NFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVAT 179
NFSEMV S GL E QI ++GCPPNY KE E + +Q ED Q+ EE IG
Sbjct: 104 NFSEMVGSVGLTECGQIVNAGCPPNY---KEANNESTAHG-AQREEDQQLSEETTIGALP 159
Query: 180 NGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQA 239
NGK R+ ESNS + +KN E E QKDPSG+SS I KE DEKKQKIEQN AN+RGKQ
Sbjct: 160 NGKRRRLVAESNSPFDPNKNAEGEFQKDPSGESSDIAKELDEKKQKIEQNCSANLRGKQV 219
Query: 240 AKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
AK KD+ SGEAPK+ YIH+RA+RGQATNSHSLAERVRREKISERMR+LQELVPGCNKI
Sbjct: 220 AKQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKI 279
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL D+E+I SKDILH+R G+AA +GF
Sbjct: 280 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELYNDVEKIQSKDILHSRGGNAAILGF 339
Query: 359 SSGMNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAVDSLGP 418
S G+NS + Y GIFQ +P I +NPQF P +VLD+E QS FQMG+DS+SAVDSLGP
Sbjct: 340 SPGINSHQ-YSHGIFQPGIPVILNSNPQFSPAHHAVLDNELQSFFQMGFDSSSAVDSLGP 398
Query: 419 N-GRLKSEL 426
N G LK EL
Sbjct: 399 NAGHLKPEL 407
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/343 (67%), Positives = 263/343 (76%), Gaps = 15/343 (4%)
Query: 86 LENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNY 145
+EN G+S NL Y S FVELVPK PGFGSGNFSEMV S GL E QI +GCPPNY
Sbjct: 1 MENPGIS---NLVHYPSGSGFVELVPKFPGFGSGNFSEMVGSLGLTECGQITHTGCPPNY 57
Query: 146 VPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQ 205
NKE N +Q ED Q+ EE +IG + NGK RKR PESNS L+ +KN E EL+
Sbjct: 58 --NKEA-------NNAQHQEDQQLSEETSIGASPNGKRRKRVPESNSPLDPNKNTEGELR 108
Query: 206 KDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRG 264
KD SG+S I KE DEK QK EQN G N+RGKQAAK KD + SGE PKE Y H+RA+RG
Sbjct: 109 KDLSGESCDIAKELDEKTQKTEQNPGPNLRGKQAAKQAKDDTQSGEVPKENYFHVRARRG 168
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
QATNSHSLAERVRREKISERMR+LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM
Sbjct: 169 QATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 228
Query: 325 KLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPGAN 384
KLATVNPEL +D+ERILSKDILH+R G+AA +GFS G+ SS PY IFQ + IP +N
Sbjct: 229 KLATVNPELQIDVERILSKDILHSRGGNAAILGFSPGI-SSHPYSHRIFQPGIQVIPNSN 287
Query: 385 PQFPPLPQSVLDHEFQSLFQMGYDSTSAVDSLGPN-GRLKSEL 426
PQF P P +VLD+E QS FQMG+DS+SA+D+LGPN RLK EL
Sbjct: 288 PQFSPAPHAVLDNELQSYFQMGFDSSSAIDNLGPNAARLKPEL 330
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/426 (58%), Positives = 302/426 (70%), Gaps = 33/426 (7%)
Query: 1 MGAGDNDDMGFQPRNESAMNC-SSGM----MPQKLPGMQMNSVPMYKSVSGPDHFYGSGW 55
MG DN +MGF ++S +NC SSGM + +K+ GM M+S MYKS +G D F+GSGW
Sbjct: 1 MGIDDNGNMGFPNTSQSILNCPSSGMNTHPISEKVTGMTMSSASMYKSSNGGDPFFGSGW 60
Query: 56 EPIVSLNQGESFGVSSMVSHNEFAPS-YPVALENQGMSSTSNLDQYSSDPSFVELVPKIP 114
+PIVSL+Q E+FG SSMVSH+EFA S YPV LENQG+ ST +L Y S+ S VE+VPK+P
Sbjct: 61 DPIVSLSQNENFGGSSMVSHSEFANSAYPVVLENQGIGSTPHLVLYPSNSSLVEMVPKLP 120
Query: 115 GFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAA 174
FGSG+FSEMV+SFGLPE Q A+SGCPPN+ PNKEG E+ S N +QS E HQI E A
Sbjct: 121 CFGSGSFSEMVASFGLPECGQTANSGCPPNFPPNKEGLTEK-SLNGAQSQEGHQISEGDA 179
Query: 175 IGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANM 234
+ + +GK RK + + LNT K+ + E K ++S KEQ+EKKQKI+QN N+
Sbjct: 180 VDASPSGKRRKSSFDPRPPLNTSKSADGEQPKGLPWENSEFSKEQEEKKQKIDQNMSPNL 239
Query: 235 RGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVP 293
RGKQ K KD+S +GEAPKE YIH+RA+RGQATNSHSLAER
Sbjct: 240 RGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAER------------------ 281
Query: 294 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSA 353
ITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN+DIER+LSKDIL++R GS
Sbjct: 282 ----ITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERLLSKDILNSRGGST 337
Query: 354 ATIGFSSGMNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAV 413
+ +GF GM+SS PYP GI QGT+P IP PQF Q+V D E QSL QMG+DS +
Sbjct: 338 SVLGFGPGMSSSHPYPHGISQGTLPGIP--TPQFHST-QAVWDGELQSLLQMGFDSNPSS 394
Query: 414 DSLGPN 419
++LG N
Sbjct: 395 NNLGTN 400
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/436 (56%), Positives = 304/436 (69%), Gaps = 20/436 (4%)
Query: 3 AGDNDDMGFQPRNESAMNC-SSGMMPQKL--PGMQMNSVPMYKSVSGPDHFYGS-GWEPI 58
G + MGFQ NES + C +SG+ + M ++SV + K + F S W+P+
Sbjct: 2 GGQENAMGFQHGNESILTCPTSGLSGANVNVSEMAISSVSIAKPSDVVNPFIASSAWDPL 61
Query: 59 VSLNQGESFGVSSMVSHNEFA---PSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPG 115
VSL+Q +SFG SSMVSH+EFA SYP+ L+NQG+S+TS+L QY SD + +VPK+
Sbjct: 62 VSLSQVQSFGGSSMVSHSEFANSNSSYPLVLDNQGISNTSHLVQYMSDSNLGGMVPKVHS 121
Query: 116 FGSGNFSEMVS--SFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEA 173
+ SG FSEMV SF +A +A++G P +Y P KE N QS + I EE
Sbjct: 122 YASGGFSEMVGAGSFCQHRSADMANTGYPIHYNPIKEAPI-----NGEQSQVEDSIPEEE 176
Query: 174 AIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGAN 233
A G A +G RKR + NS + +KN E + D G +S KE EK+ K EQN GA+
Sbjct: 177 APGSAPSGNRRKRGLDHNSTFSPNKNAEGDAVNDSPGKASNGPKEH-EKRPKGEQNNGAD 235
Query: 234 MRGKQAAKPTKDS-SLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQEL 291
+RGKQ+ K KD+ S SGEAPKE +IH+RA+RGQATNSHSLAERVRREKISERMRLLQEL
Sbjct: 236 VRGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQEL 295
Query: 292 VPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSG 351
VPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN D++RILSKDIL +R G
Sbjct: 296 VPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKDILQSRIG 355
Query: 352 SAATIG-FSSGMNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDST 410
IG + G+NSS +P G F GT+ +P + QFPPLPQ+VLDHEFQS + +GYDS
Sbjct: 356 HG--IGAYGPGINSSHTFPNGSFHGTLAGMPSTSSQFPPLPQNVLDHEFQSFYGIGYDSN 413
Query: 411 SAVDSLGPNGRLKSEL 426
+A+D+L PNGRLK+EL
Sbjct: 414 TALDNLEPNGRLKTEL 429
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/442 (55%), Positives = 305/442 (69%), Gaps = 23/442 (5%)
Query: 1 MGAGDNDDMGFQPRNESAMNC--SSGMM-PQ-KLPGMQMNSVPMYK--SVSGPDHFYGSG 54
MG +N GFQ NES + C +SG+ P + M ++SV M K +V S
Sbjct: 1 MGGQENAMGGFQHGNESILTCPPTSGLSGPNVNVSEMAISSVSMAKPSNVVANPFLASST 60
Query: 55 WEPIVSLNQGESFGVSSMVSHNEFA---PSYPVALENQG-MSSTSNLDQYSSDPSFVELV 110
W+P+VSL+Q ++FG SSMVSHNEF SYP+ L+NQG +S+TS+L QY SD + +V
Sbjct: 61 WDPLVSLSQAQTFGGSSMVSHNEFVNANSSYPLVLDNQGGISNTSHLVQYMSDSNLGGIV 120
Query: 111 PKIPGFGSGNFSEMVSS--FGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQ 168
PK+ + SG FSEMV S F + +A +G P +Y P KE N QS +
Sbjct: 121 PKVHSYASGGFSEMVGSGSFCQHGSGDMADTGYPTHYNPIKEAPI----INGEQSQVEDS 176
Query: 169 ICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQ 228
I EE A G A +G RKR + NS + +KN E + KD G +S KE EK+ K+EQ
Sbjct: 177 IPEEEAPGSAPSGNRRKRGLDHNSTFSPNKNAEGDAVKDSPGKASDGSKEH-EKRPKVEQ 235
Query: 229 NTGANMRGKQAAKPTKDS--SLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERM 285
N GA++RGKQ+ K KD+ S SGEAPKE +IH+RA+RGQATNSHSLAERVRREKISERM
Sbjct: 236 NNGADVRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERM 295
Query: 286 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN D++RILSKDI
Sbjct: 296 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKDI 355
Query: 346 LHARSGSAATIG-FSSGMNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQ 404
L +R G IG + G+NSS +P G F GT+ + + QFPPLPQ+VLDHEFQS +
Sbjct: 356 LQSRIGHG--IGAYGPGINSSHTFPNGSFHGTLAGMSSTSSQFPPLPQNVLDHEFQSFYG 413
Query: 405 MGYDSTSAVDSLGPNGRLKSEL 426
+GYDS +A+D+LGPNGRLK+EL
Sbjct: 414 IGYDSNTALDNLGPNGRLKTEL 435
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/428 (54%), Positives = 286/428 (66%), Gaps = 39/428 (9%)
Query: 8 DMGFQPRNESA-MNCSSGMMP-----QKLPGMQMNSVPMYKSVSGPDHFYGS-GWEPIVS 60
D FQ RN S+ +NC S +M + GM + S M+K +G D FY S GW+P++S
Sbjct: 3 DRVFQHRNSSSILNCPSSVMATTSISDNVAGMSICSESMFKPPNGIDPFYSSSGWDPVIS 62
Query: 61 LNQGESFGVSSMVSHNEFA-PSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSG 119
+Q +FG SSMV NEFA P+YPV LENQ M S+S+L + SD V +VPKIP FGSG
Sbjct: 63 QDQSGNFGNSSMVLQNEFANPNYPVLLENQTMGSSSHLVHFPSDSGLVGMVPKIPSFGSG 122
Query: 120 NFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVAT 179
+FSE+VSSFG N+ N + +NV + + Q E +G +
Sbjct: 123 SFSEIVSSFG------------HSNFAQNNGAGVQNTVKNVEDAQDHRQDSENGVLGASP 170
Query: 180 NGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQA 239
NGK RKR KNVEVE QKD + D + + KE DEKK N+G + R +QA
Sbjct: 171 NGK-RKR-----------KNVEVEKQKDQTRDLAELPKEYDEKK-----NSGPSSRSRQA 213
Query: 240 AKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
K KD+S EA KE YIH+RAKRGQATNSHSLAERVRRE+ISERMRLLQELVPGCNKI
Sbjct: 214 VKEAKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKI 273
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN+DIER+LSKDILH+R +A +G
Sbjct: 274 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNVDIERLLSKDILHSRGSNATALGI 333
Query: 359 SSGMNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAVDSLGP 418
G++SS P+ G+ QGT+ + PG PQF LPQ++ ++E Q++ Q GYDS +V SLGP
Sbjct: 334 GPGLSSSHPF-QGLPQGTLNAFPGTAPQFQSLPQNLWNNELQNILQNGYDSNPSVGSLGP 392
Query: 419 NGRLKSEL 426
+G K EL
Sbjct: 393 SGLSKMEL 400
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/436 (53%), Positives = 290/436 (66%), Gaps = 46/436 (10%)
Query: 1 MGAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVS 60
MG +ND+MGF+ N+ MNC S M M S F+GSGW+P+VS
Sbjct: 1 MGDLENDEMGFRNSNDGLMNCPSTM--------AMGS------------FFGSGWDPLVS 40
Query: 61 LNQGESFGV-SSMVS-HNEFAPSYPVALENQGMSSTSNLD-QYSSDPSFVELVPKIPGFG 117
L Q E++G SSMVS H EF+ S+PV LEN G S T+ QY +D +E+ K+P FG
Sbjct: 41 LGQSENYGAASSMVSSHGEFSNSFPVVLENHGGSGTTQQGVQYPTD---LEMGSKLPCFG 97
Query: 118 SGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGV 177
SGNFSEM SFG+ QI GC NY + S E+ + E + +
Sbjct: 98 SGNFSEMFGSFGVA--GQILG-GCSSNYR------NGGTTNTTQTSQENLPLAGEEILPL 148
Query: 178 AT---NGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANM 234
+ NGK RKR +S +++K +++L+KD SGDSS Q+EK ++EQN G N
Sbjct: 149 SVGSPNGKIRKRGLDSTFPFSSNKKSDMKLKKDVSGDSS---STQEEKNAEMEQNLGGNS 205
Query: 235 RGKQAAKPTKD-SSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELV 292
RGK K TK+ SS S EAPKE YIH+RA+RGQATNSHSLAERVRREKISERMRLLQELV
Sbjct: 206 RGKSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELV 265
Query: 293 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGS 352
PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP++N+DIERILSKDI + R S
Sbjct: 266 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDIFNIRGSS 325
Query: 353 AATIGFSSGMNSSRPYPPGI---FQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDS 409
+GF G+++ P PP FQGTM S+P + QFPP+PQ++L+ + QSL QMG+DS
Sbjct: 326 GNVLGFDPGLSAVSPVPPHRMFQFQGTMSSMPTTSTQFPPMPQTMLESDLQSLLQMGFDS 385
Query: 410 TSAVDSLGPNGRLKSE 425
S +D+LGPNGRLK E
Sbjct: 386 GSTIDNLGPNGRLKPE 401
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 201/435 (46%), Positives = 263/435 (60%), Gaps = 34/435 (7%)
Query: 2 GAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSL 61
G+GD+ GF+ ++ S ++C S + S++G + ++P V L
Sbjct: 5 GSGDS---GFEHKDGSLLDCPS-----------LGIFTSLSSLNGVTSIFTGDYDPPVPL 50
Query: 62 -NQGESFGVSSMVSHNEFAPSYP-VALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSG 119
+ + G+ + +H++ Y ALENQGMSST +L QYSSDP FVELVP P F +
Sbjct: 51 AHNADIIGLPPLKTHDQIDDLYAGNALENQGMSSTIHLTQYSSDPRFVELVPNFPHFSTA 110
Query: 120 NFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYE----RNSRNVSQSYEDHQICEEAAI 175
FSEMV+ LP+ I GCPP++ K G + +N N E QI ++ +
Sbjct: 111 GFSEMVTPRCLPKCHNI---GCPPDHPLEKNGTRKTSNLQNKTNNCAQMEGCQIADDGTM 167
Query: 176 GVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMR 235
++ K RKR + S KN+E KD L QDE+KQK EQ AN
Sbjct: 168 ELSPIEKKRKRLADDRSQFAHLKNMEAAQPKDEC------LGRQDERKQKAEQKIVANNC 221
Query: 236 GKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
GK K SS +GEAPKE YIH+RAKRGQATNSHSLAERVRRE+ISERM+ LQ+LVPG
Sbjct: 222 GKLIGAEVKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPG 281
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAA 354
CNKITGKAVMLDEIINYVQSLQ+QVEFLSMKLATV PE+N+ IERILS DI H++ G+A
Sbjct: 282 CNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNVQIERILSSDIHHSKGGTAP 341
Query: 355 TIGFSSGMNSSRPYPPGIFQGTMPSIPGANPQ---FPPLPQSVLDHEFQSLFQMGYDSTS 411
+GF GMNS+ P P Q P+I + Q P+P +V D+E Q + QMG+ ST+
Sbjct: 342 ILGFGPGMNSAYPIPQVTLQAISPAIESSTLQSSPMSPMP-NVWDNELQGIKQMGFTSTA 400
Query: 412 AVDSLGPNGRLKSEL 426
+++L +G K +L
Sbjct: 401 DLENLETSGCTKVQL 415
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/249 (65%), Positives = 194/249 (77%), Gaps = 8/249 (3%)
Query: 182 KTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAK 241
K RKR +S +++K +++L+KD SGDSS Q+EK ++EQN G N RGK K
Sbjct: 3 KFRKRGLDSTFPFSSNKKSDMKLKKDVSGDSSST---QEEKNAEMEQNLGGNSRGKSTGK 59
Query: 242 PTKD-SSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 299
TK+ SS S EAPKE YIH+RA+RGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT
Sbjct: 60 QTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 119
Query: 300 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFS 359
GKAVMLDEIINYVQSLQQQVEFLSMKLATVNP++N+DIERILSKDI + R S +GF
Sbjct: 120 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDIFNIRGSSGNVLGFD 179
Query: 360 SGMNSSRPYPPGI---FQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAVDSL 416
G+++ P PP FQGTM S+P + QFPP+PQ++L+ + QSL QMG+DS S +D+L
Sbjct: 180 PGLSAVSPVPPHRMFQFQGTMSSMPTTSTQFPPMPQTMLESDLQSLLQMGFDSGSTIDNL 239
Query: 417 GPNGRLKSE 425
GPNGRLK E
Sbjct: 240 GPNGRLKPE 248
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/378 (50%), Positives = 243/378 (64%), Gaps = 44/378 (11%)
Query: 53 SGWEPIVSLNQGESFGVSSMVSHNEFAPS-YPVALENQGMSSTSNLDQYSSDPSFVELVP 111
S W+P+V L+Q + G S MVSH+EFA S YP LENQGM+ S+ QY SD +F +
Sbjct: 39 SAWDPLVPLSQ--TLGGSLMVSHSEFANSAYPSVLENQGMNCDSHFVQYVSDSNFEHMAL 96
Query: 112 KIPGFG-SGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQIC 170
K+P FG +G++ IA++G PN+ P+ E ER+ N QS +
Sbjct: 97 KVPSFGQTGSY-------------DIANTGYLPNHNPSNESGMERSPINNEQSKLEGSTS 143
Query: 171 EEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGI-LKEQDEKKQKIEQN 229
EE G A + RKR + N +++KN E E KD SG S +KEQ EKK ++ QN
Sbjct: 144 EE---GAAPDEHKRKRGLDYNFTFSSNKNAEGEALKDSSGKSCDDDVKEQCEKKPRVAQN 200
Query: 230 TGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLL 288
+ AN+ GKQ K KD S S E KE +IH+RA+RGQATNSHSLAERVRREKISERMRLL
Sbjct: 201 STANLCGKQLLKQKKDDSESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLL 260
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHA 348
QELVPGC+K TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP+LN ++E+I SKD
Sbjct: 261 QELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNFNVEQICSKD---- 316
Query: 349 RSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYD 408
+ IG P G + G S+P + QFPP+PQSVL+ QS ++ Y+
Sbjct: 317 -----SHIGHG---------PIGGY-GASISMPNPSTQFPPMPQSVLN---QSFYETSYN 358
Query: 409 STSAVDSLGPNGRLKSEL 426
+ +A+D+LG +G LK+EL
Sbjct: 359 TITALDNLGTSGWLKTEL 376
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 190/403 (47%), Positives = 249/403 (61%), Gaps = 66/403 (16%)
Query: 30 LPGMQMNSVPMYKSVSGPDHFYGSG-WEPIVSLNQGESFGVSSMVSHNEFAPSYPVALEN 88
+P + + S+P+Y D F+ S W+P+V+ G S + + PS +A++N
Sbjct: 22 IPRVGITSMPLYAKA---DPFFSSADWDPVVNAAGG--------FSSSHYHPS--MAMDN 68
Query: 89 QGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYV-P 147
GMS S+ PG GSG ++M +S LP G +++
Sbjct: 69 PGMSCFSHYQ---------------PGSGSGFAADMPASL-LPYGD--CGGGQIGHFLGS 110
Query: 148 NKEGCYERNSRNVSQSYEDH-QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQK 206
+K+G ER R S+EDH Q+ ++A +G + GK +R PE+ S N K VE E Q+
Sbjct: 111 DKKG--ERLIRAGESSHEDHHQVSDDAVLGASPIGK--RRLPEAESQWNK-KAVE-EFQE 164
Query: 207 DPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQ 265
DP S +Q +KK K +Q+ K+ K+SS S EAPKE YIHMRA+RGQ
Sbjct: 165 DPQRGS-----DQSQKKHKNDQS-------KETV--NKESSQSEEAPKENYIHMRARRGQ 210
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK
Sbjct: 211 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 270
Query: 326 LATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSI-PGAN 384
LATVNPE+N+DI+RIL+KD+L +R + T+G + P FQGT+P++ N
Sbjct: 271 LATVNPEINIDIDRILAKDLLQSRDRNTPTLGLN---------PFSGFQGTIPNLSTTTN 321
Query: 385 PQFPPLPQSVLDHEFQSLFQMGYDST-SAVDSLGPNGRLKSEL 426
PQ+ PLPQ+ L+ E Q+L+QMG+ S + + S PNGRLK EL
Sbjct: 322 PQYNPLPQTTLESELQNLYQMGFVSNPTTMSSFSPNGRLKPEL 364
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 187/401 (46%), Positives = 246/401 (61%), Gaps = 71/401 (17%)
Query: 35 MNSVPMYKSVSGPDHFYGSG-WEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSS 93
+ S+P+Y D F+ S W+P+V+ ++ S + + PS +A++N GMS
Sbjct: 28 ITSMPLYAKA---DPFFSSADWDPVVN-------AAAAGFSSSHYHPS--MAMDNPGMSC 75
Query: 94 TSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS---FGLPENAQIASSGCPPNYV-PNK 149
S+ PG SG ++M +S FG QI +++ +K
Sbjct: 76 FSHYQ---------------PGSVSGFAADMPASLLPFGDCGGGQIG------HFLGSDK 114
Query: 150 EGCYERNSRNVSQSYEDH-QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDP 208
+G ER R S+EDH Q+ ++A +G + GK +R PE+ S N K VE E Q+DP
Sbjct: 115 KG--ERLIRAGESSHEDHHQVSDDAVLGASPVGK--RRLPEAESQWNK-KAVE-EFQEDP 168
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQAT 267
+ +Q +KK K +Q+ K+ K+SS S EAPKE YIHMRA+RGQAT
Sbjct: 169 QRGN-----DQSQKKHKNDQS-------KETV--NKESSQSEEAPKENYIHMRARRGQAT 214
Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 327
NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA
Sbjct: 215 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 274
Query: 328 TVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPG-ANPQ 386
TVNPE+N+DI+RIL+KD+L +R + T+G + P FQG +P++ NPQ
Sbjct: 275 TVNPEINIDIDRILAKDLLQSRDRNTPTLGLN---------PFAGFQGNIPNLSATTNPQ 325
Query: 387 FPPLPQSVLDHEFQSLFQMGYDST-SAVDSLGPNGRLKSEL 426
+ PLPQ+ L+ E Q+L+QMG+ S S + S PNGRLK EL
Sbjct: 326 YNPLPQTTLESELQNLYQMGFVSNPSTMSSFSPNGRLKPEL 366
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 186/401 (46%), Positives = 245/401 (61%), Gaps = 71/401 (17%)
Query: 35 MNSVPMYKSVSGPDHFYGSG-WEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSS 93
+ S+P+Y D F+ S W+P+V+ ++ S + + PS +A++N GMS
Sbjct: 28 ITSMPLYAKA---DPFFSSADWDPVVN-------AAAAGFSSSHYHPS--MAMDNPGMSC 75
Query: 94 TSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS---FGLPENAQIASSGCPPNYV-PNK 149
S+ PG SG ++M +S FG QI +++ +K
Sbjct: 76 FSHYQ---------------PGSVSGFAADMPASLLPFGDCGGGQIG------HFLGSDK 114
Query: 150 EGCYERNSRNVSQSYEDH-QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDP 208
+G ER R S+EDH Q+ ++A +G + GK +R PE+ S N K VE E Q+DP
Sbjct: 115 KG--ERLIRAGESSHEDHHQVSDDAVLGASPVGK--RRLPEAESQWNK-KAVE-EFQEDP 168
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQAT 267
+ +Q +KK K +Q+ K+ K+SS S EAPKE YIHMRA+RGQAT
Sbjct: 169 QRGN-----DQSQKKHKNDQS-------KETV--NKESSQSEEAPKENYIHMRARRGQAT 214
Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 327
NSHSLAERVRREKISERMRLLQEL PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA
Sbjct: 215 NSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 274
Query: 328 TVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPG-ANPQ 386
TVNPE+N+DI+RIL+KD+L +R + T+G + P FQG +P++ NPQ
Sbjct: 275 TVNPEINIDIDRILAKDLLQSRDRNTPTLGLN---------PFAGFQGNIPNLSATTNPQ 325
Query: 387 FPPLPQSVLDHEFQSLFQMGYDST-SAVDSLGPNGRLKSEL 426
+ PLPQ+ L+ E Q+L+QMG+ S S + S PNGRLK EL
Sbjct: 326 YNPLPQTTLESELQNLYQMGFVSNPSTMSSFSPNGRLKPEL 366
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/277 (56%), Positives = 193/277 (69%), Gaps = 31/277 (11%)
Query: 154 ERNSRNVSQSYEDH-QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDS 212
ER R S+EDH Q+ ++A +G + GK +R PE+ S N K VE E Q+DP +
Sbjct: 65 ERLIRAGESSHEDHHQVSDDAVLGASPVGK--RRLPEAESQWNK-KAVE-EFQEDPQRGN 120
Query: 213 SGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHS 271
+Q +KK K +Q+ K+ K+SS S EAPKE YIHMRA+RGQATNSHS
Sbjct: 121 -----DQSQKKHKNDQS-------KETV--NKESSQSEEAPKENYIHMRARRGQATNSHS 166
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP
Sbjct: 167 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 226
Query: 332 ELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPG-ANPQFPPL 390
E+N+DI+RIL+KD+L +R + T+G + P FQG +P++ NPQ+ PL
Sbjct: 227 EINIDIDRILAKDLLQSRDRNTPTLGLN---------PFAGFQGNIPNLSATTNPQYNPL 277
Query: 391 PQSVLDHEFQSLFQMGYDST-SAVDSLGPNGRLKSEL 426
PQ+ L+ E Q+L+QMG+ S S + S PNGRLK EL
Sbjct: 278 PQTTLESELQNLYQMGFVSNPSTMSSFSPNGRLKPEL 314
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 219/396 (55%), Gaps = 52/396 (13%)
Query: 2 GAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSL 61
G+GD+ GF+ ++ S ++C S + S++G + ++P V L
Sbjct: 5 GSGDS---GFEHKDGSLLDCPS-----------LGIFTSLSSLNGVTSIFTGDYDPPVPL 50
Query: 62 -NQGESFGVSSMVSHNEFAPSYP-VALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSG 119
+ + G+ + +H++ Y ALENQGMSST +L QYSSDP FVELVP P F +
Sbjct: 51 AHNADIIGLPPLKTHDQIDDLYAGNALENQGMSSTIHLTQYSSDPRFVELVPNFPHFSTA 110
Query: 120 NFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYE----RNSRNVSQSYEDHQICEEAAI 175
FSEMV+ LP+ I GCPP++ K G + +N N E QI ++ +
Sbjct: 111 GFSEMVTPRCLPKCHNI---GCPPDHPLEKNGTRKTSNLQNKTNNCAQMEGCQIADDGTM 167
Query: 176 GVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMR 235
++ K RKR + S KN+E KD L QDE+KQK EQ AN
Sbjct: 168 ELSPIEKKRKRLADDRSQFAHLKNMEAAQPKDE------CLGRQDERKQKAEQKIVANNC 221
Query: 236 GKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
GK + K SS +GEAPKE YIH+RAKRGQATNSHSLAER
Sbjct: 222 GKLIGEEVKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAER------------------- 262
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAA 354
ITGKAVMLDEIINYVQSLQ+QVEFLSMKLATV PE+N+ IERILS DI H++ G+A
Sbjct: 263 ---ITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNVQIERILSSDIHHSKGGTAP 319
Query: 355 TIGFSSGMNSSRPYPPGIFQGTMPSIPGANPQFPPL 390
+GF GMNS+ P P Q P+I + Q P+
Sbjct: 320 ILGFGPGMNSAYPIPQVTLQAISPAIESSTLQSSPM 355
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 152/396 (38%), Positives = 214/396 (54%), Gaps = 63/396 (15%)
Query: 70 SSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFG 129
SSM+ F P+ P L QG+S Q+ +D F+E + F GNFS+M++ F
Sbjct: 112 SSMLKGGIFLPNAPGMLP-QGLS------QFPADSGFIERAARFSCFNGGNFSDMMNPFS 164
Query: 130 LPENAQIASSG----------------CPPNYVPNKEGCYERNSRNVSQSYEDHQI-CEE 172
+PE+ S G P E S++VS + ++ ++ C E
Sbjct: 165 IPESLNPYSRGGGMLQQDVFASNGLKSVPGGQSQKDEPSMAEISKDVSSAKQNKELGCGE 224
Query: 173 AAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGA 232
+ G K RKR + ++ E++ K K+ E + K +QN +
Sbjct: 225 PSSGKGLGSKKRKR---------SGQDPEIDQVKGSPQQPGEASKDNPEIQHKGDQNP-S 274
Query: 233 NMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQEL 291
++ K K K + + + PKE YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+L
Sbjct: 275 SVPSKNTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 334
Query: 292 VPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSG 351
VPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+ +IE +L KDIL +R G
Sbjct: 335 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDILQSRVG 394
Query: 352 SAATIGFSSGMNSSRPYP------PGIFQGTMPSI-------------------PGANPQ 386
++T+GFS ++ PYP PG+ Q +P + G
Sbjct: 395 PSSTMGFSP--ETTMPYPQLHPSQPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKES 452
Query: 387 FPPLPQSVLDHEFQSLFQMGYDSTSAVDSLGPNGRL 422
P LP +V + E ++ QMG+ + + ++S NG L
Sbjct: 453 APQLP-NVWEDELHNVVQMGFSTGAPLNSQDLNGSL 487
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 193/340 (56%), Gaps = 54/340 (15%)
Query: 65 ESFGVSSMVSHN-----EFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSG 119
+ +S +SHN + P++P GM S L Q +D SF+E ++ F G
Sbjct: 120 RTLDISWNLSHNMLKGGVYLPNFP------GMLPPS-LSQLPADSSFIERAARLSCFSGG 172
Query: 120 NFSEMVSSFGLPENAQIASSG----------CPPNYVPNKEGCYERNSRNVSQSYEDH-- 167
NF V F +P+ + S G P N + G ++ RNV S
Sbjct: 173 NFGGDVGHFNVPDPVGVFSRGMGVIPERWDEIPRNGLGLASGTGGQSQRNVVNSESSMPR 232
Query: 168 -----QICEEAAIG--VATNG-KTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQ 219
+ C A G ++T G TRKR + + E++ P ++ K+
Sbjct: 233 GDGLGEPCTLEATGKELSTKGLGTRKRK-------RSGQKTELDQANGPLQQTTVSPKDD 285
Query: 220 DEKKQKIEQN------TGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSL 272
E ++K +QN G GKQA++P+ + PKE YIH+RA+RGQATNSHSL
Sbjct: 286 AETQRKRDQNPNSTANKGTGKHGKQASQPS-------DPPKEEYIHVRARRGQATNSHSL 338
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AERVRREKISERM+ LQELVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP
Sbjct: 339 AERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR 398
Query: 333 LNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGI 372
L+++I+ +++KDIL +R G +T+GFSS M + P PP I
Sbjct: 399 LDINIDGVVAKDILQSRVGPLSTLGFSSHMPVACP-PPHI 437
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 227/473 (47%), Gaps = 116/473 (24%)
Query: 46 GPDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPS 105
G D GW P SSM+ F PS P L +L Q+ +D +
Sbjct: 118 GTDKALQMGWNP-----------PSSMLKGGIFLPSAPGVLPQ-------SLSQFPADSA 159
Query: 106 FVELVPKIPGFGSGNFSEMVSSFGLPENAQI---------------ASSGCPPNYVPNKE 150
F+E + F GNFS+M++ FG+PE+ + A+SG V +
Sbjct: 160 FIERAARFSCFNGGNFSDMMNPFGIPESMGLYSRSGGMMQGPQEVFAASGL--KTVTGGQ 217
Query: 151 G-----CYERNSRNVSQSYEDHQI----------------CEEAAIGVATNGKTRKRAP- 188
G S++ S S E I +EA G +G + A
Sbjct: 218 GQNNVTIVGETSKDASMSIEHVAIEGPLKNERKSDSLVRSNDEAKQGAGGSGDESEEAEF 277
Query: 189 ------------ESNSLLNTDKNVEVELQKDPSGD-----SSGILKEQDEKKQKIEQNTG 231
E N + + K++ ++ +K D + G L+ + K +E
Sbjct: 278 SGGGGQEEASTLEGNGMELSAKSLGLKKRKRNGQDIELDQAKGNLQSVEAAKDNVE---- 333
Query: 232 ANMRGKQAAKPT---------KDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKI 281
A +G Q T K S + + PK EYIH+RA+RGQATNSHSLAERVRREKI
Sbjct: 334 AQQKGDQTPTSTPNKTSGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKI 393
Query: 282 SERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERIL 341
SERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+ +IE +L
Sbjct: 394 SERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLL 453
Query: 342 SKDILHARSGSAATIGFSSGMNSSRP----YPPGIFQGTMPSIPG--------ANPQFPP 389
+KDILH+R+ ++T+ FS M + P PG+ Q + P + + Q P
Sbjct: 454 AKDILHSRAVPSSTLAFSPDMIMAYPPFNTSQPGLIQASFPGMESHSDVLRRTISSQLTP 513
Query: 390 LPQ---------SVLDHEFQSLFQMGYDSTSAVDSLGPN-------GRLKSEL 426
L + D E ++ QMGY + + DS N G++K+EL
Sbjct: 514 LSGVFKEPTQLPNAWDDELHNVVQMGYGTGTTQDSQDVNAGSLPAAGQMKAEL 566
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 179/323 (55%), Gaps = 37/323 (11%)
Query: 90 GMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNK 149
GM S S +++ P FV+ P + GNF MV N + P N
Sbjct: 78 GMLSASAPPPFAATPGFVDSAAGFPCYNGGNFGAMV-------NHSFPGTHLPSGDFQNG 130
Query: 150 -EGCYE------RNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEV 202
E C E S+NV+Q+ E Q E V ++ K P N D+ V
Sbjct: 131 VEPCREIEAIENEGSKNVTQTGEKQQGDGETTCDVDSSSKELS-MPGRNGGAGHDEGTRV 189
Query: 203 ELQKDP--SGDSSGIL---------------KEQDEKKQKIEQNTGANMRGKQAAKPTKD 245
K SG G+ K ++++K K ++++ A+ GK + K TKD
Sbjct: 190 SCSKKRKRSGQDDGVKHAEGDEQLATVGSAQKNENDEKGKPKRSSVAS--GKSSGKQTKD 247
Query: 246 SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
++ G +EYIH+RA+RGQATNSHSLAERVRREKISERM+ LQ LVPGC K+TGKAVML
Sbjct: 248 NA--GSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVML 305
Query: 306 DEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHAR-SGSAATIGFSSGMNS 364
DEIINYVQSLQ+QVEFLSMKLA+VNP L+ +IERILSKDI +R S +++ GF +
Sbjct: 306 DEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQSRGSAASSAFGFLPDIVH 365
Query: 365 SRPYPPGIFQGTMPSIPGANPQF 387
R +PP Q MPSI + F
Sbjct: 366 PRLHPPKYTQVVMPSIVNSTDAF 388
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/395 (40%), Positives = 219/395 (55%), Gaps = 93/395 (23%)
Query: 35 MNSVPMYKSVSGPDHFYGSG-WEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSS 93
+ S+P+Y D F+ S W+P+V+ ++ S + + PS +A++N GMS
Sbjct: 28 ITSMPLYAKA---DPFFSSADWDPVVN-------AAAAGFSSSHYHPS--MAMDNPGMSC 75
Query: 94 TSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS---FGLPENAQIASSGCPPNYV-PNK 149
S+ PG SG ++M +S FG QI +++ +K
Sbjct: 76 FSHYQ---------------PGSVSGFAADMPASLLPFGDCGGGQIG------HFLGSDK 114
Query: 150 EGCYERNSRNVSQSYEDH-QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDP 208
+G ER R S+EDH Q+ ++A +G + GK +R PE+ S N K VE E Q+DP
Sbjct: 115 KG--ERLIRAGESSHEDHHQVSDDAVLGASPVGK--RRLPEAESQWNK-KAVE-EFQEDP 168
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQAT 267
+ +Q +KK K +Q+ K+ K+SS S EAPKE YIHMRA+RGQAT
Sbjct: 169 QRGN-----DQSQKKHKNDQS-------KETV--NKESSQSEEAPKENYIHMRARRGQAT 214
Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 327
NSHSLAER ITGKAVMLDEIINYVQSLQQQVEFLSMKLA
Sbjct: 215 NSHSLAER----------------------ITGKAVMLDEIINYVQSLQQQVEFLSMKLA 252
Query: 328 TVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPG-ANPQ 386
TVNPE+N+DI+RIL+KD+L +R + T+G + P FQG +P++ NPQ
Sbjct: 253 TVNPEINIDIDRILAKDLLQSRDRNTPTLGLN---------PFAGFQGNIPNLSATTNPQ 303
Query: 387 FPPLPQSVLDHEFQSLFQMGYDST-SAVDSLGPNG 420
+ PLPQ+ L+ E Q+L+QMG+ S S + S PNG
Sbjct: 304 YNPLPQTTLESELQNLYQMGFVSNPSTMSSFSPNG 338
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 203/393 (51%), Gaps = 73/393 (18%)
Query: 41 YKSVSGPDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQY 100
+ V D G GW+ G SSM+ + P N +L Q+
Sbjct: 87 FARVGCDDRTVGMGWD----------LGSSSMIKRDGVLP-------NGAEIFPQSLSQF 129
Query: 101 SSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQI---------------------ASS 139
S+D FV+ ++ F +G+F +M++S G+P++ + S
Sbjct: 130 STDSGFVD-AARMSCFSAGSFVDMMNSCGIPQSMALPLHVSRSVEHLGSDGSPIQNDRRS 188
Query: 140 GCPPNYVPNKEG-------CYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNS 192
CP + EG C E + + S + Q+ + A+ + G K+ +
Sbjct: 189 DCP--VMSQDEGKQVLGRSCNEADG-DESSGDDGSQMLDCASGEPSIKGLNPKKRKRNGQ 245
Query: 193 LLNTDKNV-EVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGE 251
++DK +EL + + D+ E ++K +Q T + K + K K S + +
Sbjct: 246 DGDSDKATGTLELPSETAKDNC-------ESRKKGKQQTSST--AKASGKNAKQGSQASD 296
Query: 252 APKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
P E Y+H+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIIN
Sbjct: 297 PPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 356
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRP--- 367
YVQSLQQQVEFLSMKLATVNP ++ ++ER+L KDIL + G ++ +GF M + P
Sbjct: 357 YVQSLQQQVEFLSMKLATVNPHVDFNMERLLPKDILQHQPGPSSALGFLREMPMAFPPLS 416
Query: 368 --YPPGIFQGTMPSIPG--------ANPQFPPL 390
Y PG+ T+P++ PQ PL
Sbjct: 417 HSYQPGLIHSTLPNMANLSDMLRQTVQPQLEPL 449
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 181/321 (56%), Gaps = 55/321 (17%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVS-------SFGL------PENAQIASS---- 139
+ Q+ +D F+E + F GNFS+MV+ + GL + Q S+
Sbjct: 123 MAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMHGQCQSNELNV 182
Query: 140 GCPPNYV----------------PNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKT 183
G P N V PN G S NVS+ + + ++N K
Sbjct: 183 GEPHNDVSVAVKESTVRSSEQAEPNVPG-----SGNVSEDTQSSGGNGQKGRETSSNTKK 237
Query: 184 RKRAPESNS-LLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKI--EQNTGANMRGKQAA 240
RKR + NS + ++ + E + D +GD K DE+ +++ +GKQ++
Sbjct: 238 RKRNGQKNSEAAQSHRSQQSEEEPDNNGDE----KRNDEQSPNSPGKKSNSGKQQGKQSS 293
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
P KD YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGCNK+TG
Sbjct: 294 DPPKDG---------YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTG 344
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSS 360
KAVMLDEIINYVQSLQ+QVEFLSMKLATVNP+++ ++E +L+KD L R+GS++T F
Sbjct: 345 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPP 404
Query: 361 GMNSSR-PYPPGIFQGTMPSI 380
M+ S P P G Q T+ SI
Sbjct: 405 NMSMSYPPLPHGFMQQTLSSI 425
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 180/320 (56%), Gaps = 54/320 (16%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVS-------SFGL------PENAQIASS---- 139
+ Q+ +D F+E + F GNFS+MV+ + GL Q S+
Sbjct: 123 MAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQGQCQSNELNV 182
Query: 140 GCPPNYV----------------PNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKT 183
G P N V PN G S NVS+ + + ++N K
Sbjct: 183 GEPHNDVSVAVKESTVRSSEQAKPNVPG-----SGNVSEDTQSSGGNGQKGRETSSNTKK 237
Query: 184 RKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKI--EQNTGANMRGKQAAK 241
RKR +++ + ++ + E + D +GD K DE+ +++ +GKQ++
Sbjct: 238 RKRNGQNSEAAQSHRSQQSEEEPDNNGDE----KRNDEQSPNSPGKKSNSGKQQGKQSSD 293
Query: 242 PTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
P KD YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGCNK+TGK
Sbjct: 294 PPKDG---------YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 344
Query: 302 AVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSG 361
AVMLDEIINYVQSLQ+QVEFLSMKLATVNP+++ ++E +L+KD L R+GS++T F
Sbjct: 345 AVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPN 404
Query: 362 MNSSR-PYPPGIFQGTMPSI 380
M+ + P P G Q T+ SI
Sbjct: 405 MSMAYPPLPHGFMQQTLSSI 424
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 219/469 (46%), Gaps = 112/469 (23%)
Query: 46 GPDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPS 105
G D GW P +SM+ F P+ P L +L Q+ +D +
Sbjct: 118 GIDRTLEMGWNP-----------PNSMLKGGNFLPNAPGMLPQ-------SLSQFPADSA 159
Query: 106 FVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNK-----------EGCYE 154
F+E + F G+F +MV+ FG+PE+ + S G P + G +
Sbjct: 160 FIERAARFSCFNGGDFGDMVNPFGVPESMGLFSRGGGMMQGPGEVFVGSGMKSVSGGQAQ 219
Query: 155 RN-------SRNVSQSYEDHQICE------------------EAAIGVATNGKTRKRAPE 189
+N S++VS S DH E EA GV +G A
Sbjct: 220 KNVMNAGEASKDVSMSV-DHMATEGSPLKNETKRESLARSRDEAKKGVGGSGNDSDEAEF 278
Query: 190 SN-------SLL------------------NTDKNVEVELQKDPSGDSSGILKEQDEKKQ 224
S SLL + ++ E++ K + G + Q + Q
Sbjct: 279 SGGSGQDEPSLLEGNCGELSAKSLGSKKRKRSGEDAELDQAKGTPQSAKGSPETQQKGDQ 338
Query: 225 KIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISE 283
K T K + K K S + PK EYIH+RA+RGQATNSHSLAERVRREKISE
Sbjct: 339 KPTSTT-----SKASGKQGKQGSQGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISE 393
Query: 284 RMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSK 343
RM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+ +IE +L+K
Sbjct: 394 RMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAK 453
Query: 344 DILHARSGSAATIGFSSGMNSSRPY----PPGIFQGTMPSIPG--------ANPQF---- 387
DIL +R+ +++ FSS M + P PG+ P + N Q
Sbjct: 454 DILQSRAVPPSSLAFSSEMPMAYPALHQSQPGLIPTAFPGMESHSDIIRRTINSQLTAMT 513
Query: 388 -----PPLPQSVLDHEFQSLFQMGYDSTSAVDSLG-----PNGRLKSEL 426
P +V D E ++ QM Y +++ DS P G LK EL
Sbjct: 514 AGFKEPAQLPNVWDDELHNVVQMTYGTSAPQDSQDVNEPLPPGHLKVEL 562
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 181/308 (58%), Gaps = 28/308 (9%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSS-FGLPENAQIASSGCPPNYVPNKEGCYER 155
+ Q+ +D F+E + F GNFS+MV+ G PE+ + G + + C E
Sbjct: 123 MAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGNPESIGLFLQGG--GTMQGQCQCDEL 180
Query: 156 N----SRNVSQSYEDHQI--CEEAAIGV-----------ATNGKTRKRAPESNSLLNTDK 198
N +VS + +D + CE+A V ++ G RK S++ +
Sbjct: 181 NVGEPHNDVSTAVKDPTVRSCEQAKPNVPGSGNVSEDTQSSGGNGRKGRETSSNTKKRKR 240
Query: 199 NVEVELQKDPSGDSSGILKEQD---EKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE 255
N +V + S S +E D +KK+ EQ+ N G + + S + PK+
Sbjct: 241 NGQVNSEAAQSHRSQQSEEEPDNNGDKKRNSEQS--PNSPGNKTNSGKRQGKQSSDLPKD 298
Query: 256 -YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQS
Sbjct: 299 GYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 358
Query: 315 LQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIG-FSSGMNSSR-PYPPGI 372
LQ+QVEFLSMKLATVNP+++ ++E +L+KD L R+GS++T F+ M + P P G
Sbjct: 359 LQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTTPFTPNMAMAYPPLPHGF 418
Query: 373 FQGTMPSI 380
Q T+ SI
Sbjct: 419 MQQTLSSI 426
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 180/321 (56%), Gaps = 55/321 (17%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVS-------SFGL------PENAQIASS---- 139
+ Q+ +D F+E + F GNFS+MV+ + GL Q S+
Sbjct: 123 MAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQGQCQSNELNV 182
Query: 140 GCPPNYV----------------PNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKT 183
G P N V PN G S NVS+ + + ++N K
Sbjct: 183 GEPHNDVSVAVKESTVRSSEQAKPNVPG-----SGNVSEDTQSSGGNGQKGRETSSNTKK 237
Query: 184 RKRAPESNS-LLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKI--EQNTGANMRGKQAA 240
RKR + NS + ++ + E + D +GD K DE+ +++ +GKQ++
Sbjct: 238 RKRNGQKNSEAAQSHRSQQSEEEPDNNGDE----KRNDEQSPNSPGKKSNSGKQQGKQSS 293
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
P KD YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGCNK+TG
Sbjct: 294 DPPKDG---------YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTG 344
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSS 360
KAVMLDEIINYVQSLQ+QVEFLSMKLATVNP+++ ++E +L+KD L R+GS++T F
Sbjct: 345 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPP 404
Query: 361 GMNSSR-PYPPGIFQGTMPSI 380
M+ + P P G Q T+ SI
Sbjct: 405 NMSMAYPPLPHGFMQQTLSSI 425
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 169/303 (55%), Gaps = 31/303 (10%)
Query: 100 YSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYE----- 154
+++ P FV+ P + GN M ++F P Q + ++ E C E
Sbjct: 87 FATTPGFVDSAAGFPCYNGGNLGAM-TNFSFPTTHQPLA-----DFQNGVESCREIEAIV 140
Query: 155 -RNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDP--SGD 211
S+NVSQ+ E Q E V ++ K N D+ + V K SG
Sbjct: 141 IEGSKNVSQTGEKQQGDGETTHAVDSSSKELSML-GCNGGAGHDEEIRVSCSKKRKRSGQ 199
Query: 212 SSGI--------LKEQDEKKQKIEQNTGANMRG-----KQAAKPTKDSSLSGEAPKEYIH 258
G+ L K+ + G R K + K TKD++ G ++YIH
Sbjct: 200 DGGVKHAEGGEQLATVGSAKKNENDDNGEPKRSSVASRKSSGKQTKDNA--GSPKEDYIH 257
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+Q
Sbjct: 258 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 317
Query: 319 VEFLSMKLATVNPELNLDIERILSKDILHARSGSAAT-IGFSSGMNSSRPYPPGIFQGTM 377
VEFLSMKLA+VNP L+ +IERILSKDI +R +A++ GF + R +PP Q M
Sbjct: 318 VEFLSMKLASVNPTLDFNIERILSKDIFQSRGTTASSAFGFFPDIVHPRLHPPKYTQVGM 377
Query: 378 PSI 380
PSI
Sbjct: 378 PSI 380
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 177/312 (56%), Gaps = 29/312 (9%)
Query: 90 GMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS-F-GLPENAQIASSGCPPNYVP 147
GM S + + P FV+ P + GN M++ F G+ + +G P
Sbjct: 79 GMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQPLGDFQNGVEP--CR 136
Query: 148 NKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
E S+NVSQ+ E Q E V ++ K P N D+ V K
Sbjct: 137 EIEDIEIEGSKNVSQTGEKQQGDGETTHAVDSSSKELS-MPGRNGGAGHDEGTRVSCSKK 195
Query: 208 P--SGDSSGIL---------------KEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSG 250
SG G+ K +D++K + E+++ A+ GK + K KD++ S
Sbjct: 196 RKRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPERSSVAS--GKSSGKQIKDNAGS- 252
Query: 251 EAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
PKE YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEII
Sbjct: 253 --PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEII 310
Query: 310 NYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAAT-IGFSSGMNSSRPY 368
NYVQSLQ+QVEFLSMKLA+VNP L+ +IERILSKDI R +A++ GF + R +
Sbjct: 311 NYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLH 370
Query: 369 PPGIFQGTMPSI 380
PP Q MPSI
Sbjct: 371 PPKYTQVGMPSI 382
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 172/310 (55%), Gaps = 25/310 (8%)
Query: 90 GMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS-F-GLPENAQIASSGCPPNYVP 147
GM S + + P FV+ P + GN M++ F G+ + +G P
Sbjct: 79 GMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQPLGDFQNGVEP--CR 136
Query: 148 NKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
E S+NVSQ+ E Q E V ++ K P N D+ V K
Sbjct: 137 EIEDIEIEGSKNVSQTGEKQQGDGETTHAVDSSSKELS-MPGRNGGAGHDEGTRVSCSKK 195
Query: 208 P--SGDSSGILK-------------EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEA 252
SG G+ +++E +K E + GK + K KD++ S
Sbjct: 196 RKRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGS--- 252
Query: 253 PKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
PKE YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINY
Sbjct: 253 PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINY 312
Query: 312 VQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAAT-IGFSSGMNSSRPYPP 370
VQSLQ+QVEFLSMKLA+VNP L+ +IERILSKDI R +A++ GF + R +PP
Sbjct: 313 VQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPP 372
Query: 371 GIFQGTMPSI 380
Q MPSI
Sbjct: 373 KYTQVGMPSI 382
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 166/274 (60%), Gaps = 38/274 (13%)
Query: 180 NGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMR-GKQ 238
N K RKR+ + N N EL + + D+ ++ D + + +G N + G Q
Sbjct: 152 NTKKRKRSGQDGD--NDKANGAQELPSEGAEDNYENQQKGDHQPTSTAKASGKNAKLGSQ 209
Query: 239 AAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
A+ P K+ EYIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+
Sbjct: 210 ASDPPKE---------EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 260
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+ +IE +L+KDIL R G ++ +GF
Sbjct: 261 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPGPSSALGF 320
Query: 359 SSGMNSSRP--YP--PGIFQGTMPSIPGA--------NPQFPPL------PQ---SVLDH 397
M+ + P +P PG+ +P++ + +PQ PL P V +
Sbjct: 321 PLDMSMAFPPLHPPQPGLIHPVIPNMANSSDILQRTIHPQLAPLNGGLKEPNQLPDVWED 380
Query: 398 EFQSLFQMGYDSTSAV-----DSLGPNGRLKSEL 426
E ++ QM + +T+ + D GP ++K EL
Sbjct: 381 ELHNVVQMSFATTAPLTSQDFDGTGPASQMKVEL 414
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 172/310 (55%), Gaps = 25/310 (8%)
Query: 90 GMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS-F-GLPENAQIASSGCPPNYVP 147
GM S + + P FV+ P + GN M++ F G+ + +G P
Sbjct: 136 GMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQPLGDFQNGVEP--CR 193
Query: 148 NKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
E S+NVSQ+ E Q E V ++ K P N D+ V K
Sbjct: 194 EIEDIEIEGSKNVSQTGEKQQGDGETTHAVDSSSKELS-MPGRNGGAGHDEGTRVSCSKK 252
Query: 208 P--SGDSSGILK-------------EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEA 252
SG G+ +++E +K E + GK + K KD++ S
Sbjct: 253 RKRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGS--- 309
Query: 253 PKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
PKE YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINY
Sbjct: 310 PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINY 369
Query: 312 VQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAAT-IGFSSGMNSSRPYPP 370
VQSLQ+QVEFLSMKLA+VNP L+ +IERILSKDI R +A++ GF + R +PP
Sbjct: 370 VQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPP 429
Query: 371 GIFQGTMPSI 380
Q MPSI
Sbjct: 430 KYTQVGMPSI 439
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 171/309 (55%), Gaps = 23/309 (7%)
Query: 90 GMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS-F-GLPENAQIASSGCPPNYVP 147
GM S + + P FV+ P + GN M++ F G+ + +G P
Sbjct: 187 GMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQPLGDFQNGVEP--CR 244
Query: 148 NKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
E S+NVSQ+ E Q E V ++ K P N D+ V K
Sbjct: 245 EIEDIEIEGSKNVSQTGEKQQGDGETTHAVDSSSKELS-MPGRNGGAGHDEGTRVSCSKK 303
Query: 208 P--SGDSSGILK-------------EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEA 252
SG G+ +++E +K E + GK + K KD++ G
Sbjct: 304 RKRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNA--GSP 361
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
++YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYV
Sbjct: 362 KEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYV 421
Query: 313 QSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAAT-IGFSSGMNSSRPYPPG 371
QSLQ+QVEFLSMKLA+VNP L+ +IERILSKDI R +A++ GF + R +PP
Sbjct: 422 QSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPPK 481
Query: 372 IFQGTMPSI 380
Q MPSI
Sbjct: 482 YTQVGMPSI 490
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 190/374 (50%), Gaps = 80/374 (21%)
Query: 66 SFGVSSMVSHN-----EFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGN 120
+ +S +SHN + P++P GM S L Q +D SF+E ++ F GN
Sbjct: 121 TLDISWNLSHNMLKGGVYLPNFP------GMLPPS-LSQLPADSSFIERAARLSCFSGGN 173
Query: 121 FSEMVSSFGLPENAQIASSG----------CPPNYVPNKEGCYERNSRNVSQSYEDHQIC 170
F V F +P+ + S G P N + G ++ RNV S +C
Sbjct: 174 FGGDVGHFNVPDPVGVFSRGMGVIPERWDEIPRNGLGLASGTGGQSQRNVVNSESSMPVC 233
Query: 171 EEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPS---------GDS--------- 212
+G T + +P++ S L D ++ + + GD
Sbjct: 234 L-----TNEHGATERDSPKNGSPLKLDGRGKLAVDGSANESDEAECSGGDGLGEPCTLEA 288
Query: 213 -----------------SGILKEQDEKKQKIEQNTGA----------------NMRGKQA 239
SG E D+ ++Q T + + K
Sbjct: 289 TGKELSTKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANKGT 348
Query: 240 AKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
K K +S + PK EYIH+RA+RGQATNSHSLAERVRREKISERM+ LQELVPGC+K+
Sbjct: 349 GKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKV 408
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+++I+ +++KDIL +R G +T+GF
Sbjct: 409 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGVVAKDILQSRVGPLSTLGF 468
Query: 359 SSGMNSSRPYPPGI 372
SS M + P PP I
Sbjct: 469 SSHMPVACP-PPHI 481
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 160/278 (57%), Gaps = 49/278 (17%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERN 156
L + +DP F E + FG+GNFS + + FGL + +P + +
Sbjct: 100 LAPFPADPGFAERAARFSCFGTGNFSGLSAQFGLNDTE-----------LPYRSSTGWK- 147
Query: 157 SRNVSQSYEDHQICEEAAIGVAT-------NGKTRKRAPESNSLLNTDKNVEVELQKDPS 209
+ S E+ + E+ G + NG+ RK P + E+ PS
Sbjct: 148 ---LGDSREESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKA---------KEVPSSPS 195
Query: 210 GDSSGILKEQDE---KKQKIEQNTGA-----------NMRGKQAA----KPTKDSSLSGE 251
+ + ++DE K+ K ++ +G+ N K A K +KD+ E
Sbjct: 196 AKDAKVASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPE 255
Query: 252 APKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
APK+YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINY
Sbjct: 256 APKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 315
Query: 312 VQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHAR 349
VQSLQ+QVEFLSMKLATVNP ++ ++E +LSK+I +R
Sbjct: 316 VQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQSR 353
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 139/207 (67%), Gaps = 12/207 (5%)
Query: 182 KTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAK 241
K RKR+ + LL VE ++P +++E +K E + GK + K
Sbjct: 183 KKRKRSGQYELLLKDHGVKHVEGGEEP---------QKNENDEKDEPKRSSVASGKSSGK 233
Query: 242 PTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
KD++ G +EYIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGK
Sbjct: 234 QAKDNA--GSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGK 291
Query: 302 AVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI-GFSS 360
AVMLDEIINYVQSLQ+QVEFLSMKLA+VNP L+ +I+RILSKDI ++ A+++ GF
Sbjct: 292 AVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIDRILSKDIFQSQGAIASSVFGFLP 351
Query: 361 GMNSSRPYPPGIFQGTMPSIPGANPQF 387
G+ + + P Q MPSI + F
Sbjct: 352 GIVYPQLHQPKYMQVKMPSIVNSTDAF 378
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 151/239 (63%), Gaps = 32/239 (13%)
Query: 217 KEQDEKKQKIEQN--TGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLA 273
K E +QK +Q + AN K K K S + + PKE YIH+RA+RGQATNSHSLA
Sbjct: 316 KGNSENQQKGDQQPISTAN---KACGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLA 372
Query: 274 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
ERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L
Sbjct: 373 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 432
Query: 334 NLDIERILSKDILHARSGSAATIGFSSGMNSSRP--YP--PGIFQGTMPSIPGA------ 383
+ +IE +L+KDIL R + +GF M+ + P +P PG+ +P++ +
Sbjct: 433 DFNIEGLLAKDILQQRPDPSTALGFPLDMSMAFPPLHPPQPGLIHPVIPNMTNSSDILQR 492
Query: 384 --NPQFPPL------PQ---SVLDHEFQSLFQMGYDSTS-----AVDSLGPNGRLKSEL 426
+PQ PL P V + E ++ QM + +T+ VD GP ++K EL
Sbjct: 493 TIHPQLAPLNGGFKEPNQLPDVWEDELHNVVQMSFATTAPPTSQDVDGTGPASQMKVEL 551
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 205/402 (50%), Gaps = 81/402 (20%)
Query: 81 SYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPE-NAQIASS 139
S P+AL S++ ++++DP F E + FGS +F+ S FGL + Q+ +
Sbjct: 165 STPLAL-------NSSVAEFTADPGFAERAARFSCFGSRSFNGRTSQFGLNKLEMQLMGN 217
Query: 140 GCPPNYVP------------------NKEG---CYERNSRNVSQSYEDHQICEEAAIGVA 178
N +P NK +R+ S S E+ + E+
Sbjct: 218 A---NKLPRVSSTPSLKAVGSHHQKGNKNSSPLLQDRSELANSTSQEESSVSEQNPPNAE 274
Query: 179 TNGKTRKRAPESNSLL----NTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANM 234
N K RK AP++ S N+ K+ EV+ + + S ++ D K ++ + G +
Sbjct: 275 LNSKKRKTAPKAKSKEAPQPNSAKDAEVD--DNSNAKRSKGNEKNDVKAEEEHKGNGDDK 332
Query: 235 RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
+ K + KP E PK+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPG
Sbjct: 333 QNKASTKPP-------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 385
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHAR----- 349
CNK+TGKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L+++++ ++SKDI
Sbjct: 386 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDINLDTLMSKDIFQTTNQLPH 445
Query: 350 ------SGSAATIGFSSGMN---------------SSRPYPPGIFQGT---MPSIPGAN- 384
S ++A G N S P G+ +P + G N
Sbjct: 446 PIFPIDSSASAIFGHQPQQNPALHSNISNGALTHCSVDPLDTGLSHNLNMHLPPLEGFNH 505
Query: 385 --PQFPPLPQSVLDHEFQSLFQMGYDSTSAVDSLGPNGRLKS 424
PQFP + + + QS+ QMG+ ++L P + S
Sbjct: 506 TPPQFP----TFCEEDLQSIVQMGFTQIPVPEALLPGQNIHS 543
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 150/240 (62%), Gaps = 38/240 (15%)
Query: 217 KEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAER 275
K+ E + K +QN +++ K K K + + + PKE YIH+RA+RGQATNSHSLAER
Sbjct: 365 KDNPEIQHKGDQNP-SSVPSKNTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHSLAER 423
Query: 276 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
VRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+
Sbjct: 424 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 483
Query: 336 DIERILSKD--------ILHARSGSAATIGFSSGMNSSRPYP------PGIFQGTMPSI- 380
+IE +L KD IL +R G ++T+GFS ++ PYP PG+ Q +P +
Sbjct: 484 NIEGMLGKDVSEIAXQKILQSRVGPSSTMGFSP--ETTMPYPQLHPSQPGLIQVGLPGLG 541
Query: 381 ------------------PGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAVDSLGPNGRL 422
G P LP +V + E ++ QMG+ + + ++S NG L
Sbjct: 542 NSSDAIRRTINSQLAAMSGGYKESAPQLP-NVWEDELHNVVQMGFSTGAPLNSQDLNGSL 600
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 183/310 (59%), Gaps = 40/310 (12%)
Query: 85 ALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGL---PENAQIASSGC 141
+LEN+G+ + SN+ DPS + FG+GNFS+MV SFG +++QIA+ C
Sbjct: 51 SLENEGVKTISNILH---DPSTLSF----DMFGTGNFSDMVGSFGFLTEADHSQIANIKC 103
Query: 142 PPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVE 201
P +YV + + +N ++S D + RK SNS + +KN E
Sbjct: 104 PFSYVQILDDEEMVSPKNDAKSRPD-----------CVSENQRKFVLGSNSS-SPNKNAE 151
Query: 202 VELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMR 260
+P+ IL + D K QK+E AN K +K K S + +APKE YIH++
Sbjct: 152 DNFNVEPTE----ILDKAD-KTQKVEHRLSANFNTKPDSKKAKGGSQNVQAPKENYIHVQ 206
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+RG+A N+HSLAERVRREKISERM+LLQ+LVPGC++ITGK V+LDEIINYVQSLQQQVE
Sbjct: 207 ARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVE 266
Query: 321 FLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY-------PPGIF 373
FLSMKLA+V E +L+ E+IL + + S++ + G N + P P F
Sbjct: 267 FLSMKLASVGLESSLEAEQIL---LTNNSYLSSSNVLCKRGENVNDPRSRIIHTSPHVTF 323
Query: 374 Q--GTMPSIP 381
Q GT P++P
Sbjct: 324 QLYGTTPTMP 333
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 172/310 (55%), Gaps = 29/310 (9%)
Query: 90 GMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVS-SFGLPE---NAQIASSGCPPNY 145
GM S S L ++++ FV+ P + GN M++ SF + + Q C
Sbjct: 74 GMLSAS-LPPFAANSGFVDSAAGFPCYNGGNLGAMINHSFPSTQPLGDFQNGIEPCSEIE 132
Query: 146 VPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQ 205
EGC +NVS + E Q E V ++ K + PE D+ V
Sbjct: 133 AIESEGC-----KNVSLTGEKQQGDAEMTHAVDSSSKELSK-PECVGGAGRDEGTRVSCS 186
Query: 206 KD-------------PSGDSSGILK--EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSG 250
K G+ + +++E +K E + GK + K KD++ G
Sbjct: 187 KKRKRSIQHGGVKHVEGGEQLATMAAAQKNENDEKYEPKRSSVAPGKSSRKQAKDNA--G 244
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
+EYIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIIN
Sbjct: 245 SPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIIN 304
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAA-TIGFSSGMNSSRPYP 369
YVQSLQ+QVEFLSMKLA+VNP L+L+IE ILSKDI +R +A+ GF + R +P
Sbjct: 305 YVQSLQRQVEFLSMKLASVNPTLDLNIESILSKDIFQSRGTTASLAFGFFPDIIPPRLHP 364
Query: 370 PGIFQGTMPS 379
P Q +PS
Sbjct: 365 PKYTQIGIPS 374
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 113/144 (78%), Gaps = 15/144 (10%)
Query: 203 ELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRA 261
E Q+DP S +Q +KK K +Q+ K+SS + E PKE YIHMRA
Sbjct: 5 EFQEDPQSGS-----DQSQKKHKNDQSKET---------MNKESSQNEEEPKEKYIHMRA 50
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+RGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA MLDEIINY+QSLQQQVEF
Sbjct: 51 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEF 110
Query: 322 LSMKLATVNPELNLDIERILSKDI 345
LSMKLATVNP++N+DI+RIL+KD+
Sbjct: 111 LSMKLATVNPDINIDIDRILAKDV 134
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 182/310 (58%), Gaps = 40/310 (12%)
Query: 85 ALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGL---PENAQIASSGC 141
+LEN+G+ + SN+ DPS + FG+GNFS+MV SFG +++QIA+ C
Sbjct: 51 SLENEGVKTISNILH---DPSTLSF----DMFGTGNFSDMVGSFGFLTEADHSQIANIKC 103
Query: 142 PPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVE 201
P +YV + + +N ++S D + RK SNS + +KN E
Sbjct: 104 PFSYVQILDDEEMVSPKNDAKSRPD-----------CVSENQRKFVLGSNSS-SPNKNAE 151
Query: 202 VELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMR 260
+P+ IL + D K QK+E AN K +K K S + +APKE YIH++
Sbjct: 152 DNFNVEPTE----ILDKAD-KTQKVEHRLSANFNTKPDSKKAKGGSQNVQAPKENYIHVQ 206
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+RG+A N+HSLAERVRREKISERM+LLQ+LVPGC++ITGK V+LDEIINYVQSLQQQVE
Sbjct: 207 ARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVE 266
Query: 321 FLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY-------PPGIF 373
LSMKLA+V E +L+ E+IL + + S++ + G N + P P F
Sbjct: 267 LLSMKLASVGLESSLEAEQIL---LTNNSYLSSSNVLCKRGENVNDPRSRIIHTSPHVTF 323
Query: 374 Q--GTMPSIP 381
Q GT P++P
Sbjct: 324 QLYGTTPTMP 333
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 166/314 (52%), Gaps = 70/314 (22%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPEN----------------------- 133
L + +DP F E + FG+GNFS + + FGL +
Sbjct: 158 LAPFPADPGFAERAARFSCFGTGNFSGLSAQFGLNDTELPYRSSTGKLSRVSSNQSFKAA 217
Query: 134 -----AQIASSGCPP----NYVPNKEGCYERNSR----NVSQSYEDHQICEEAAIGVAT- 179
AQ PP + K G R+S + S E+ + E+ G +
Sbjct: 218 GSQLGAQEFKDRSPPQDGVSASDKKLGKISRSSTPDNAELGDSREESSVSEQIPGGETSL 277
Query: 180 ------NGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDE---KKQKIEQNT 230
NG+ RK P + E+ PS + + ++DE K+ K ++ +
Sbjct: 278 KGQNDANGRKRKSIPRGKA---------KEVPSSPSAKDAKVASDKDESNAKRSKPDEGS 328
Query: 231 GA-----------NMRGKQAA----KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAER 275
G+ N K A K +KD+ EAPK+YIH+RA+RGQAT+SHSLAER
Sbjct: 329 GSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAER 388
Query: 276 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
VRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++
Sbjct: 389 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDF 448
Query: 336 DIERILSKDILHAR 349
++E +LSK+I +R
Sbjct: 449 NMEALLSKEIFQSR 462
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 166/314 (52%), Gaps = 70/314 (22%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPEN----------------------- 133
L + +DP F E + FG+GNFS + + FGL +
Sbjct: 158 LAPFPADPGFAERAARFSCFGTGNFSGLSAQFGLNDTELPYRSSTGKLSRVSSNQSFKAA 217
Query: 134 -----AQIASSGCPP----NYVPNKEGCYERNSR----NVSQSYEDHQICEEAAIGVAT- 179
AQ PP + K G R+S + S E+ + E+ G +
Sbjct: 218 GSQLGAQEFKDRSPPQDGVSASDKKLGKISRSSTPDNTELGDSREESSVSEQIPGGETSL 277
Query: 180 ------NGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDE---KKQKIEQNT 230
NG+ RK P + E+ PS + + ++DE K+ K ++ +
Sbjct: 278 KGQNDANGRKRKSIPRGKA---------KEVPSSPSAKDAKVASDKDESNAKRSKPDEGS 328
Query: 231 GA-----------NMRGKQAA----KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAER 275
G+ N K A K +KD+ EAPK+YIH+RA+RGQAT+SHSLAER
Sbjct: 329 GSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAER 388
Query: 276 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
VRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++
Sbjct: 389 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDF 448
Query: 336 DIERILSKDILHAR 349
++E +LSK+I +R
Sbjct: 449 NMEALLSKEIFQSR 462
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 138/218 (63%), Gaps = 30/218 (13%)
Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVR 277
E+D+ K K EQ+T + G+ + K TKD + E PK+YIH+RA+RGQAT+SHSLAERVR
Sbjct: 364 EKDDAKSKAEQSTILST-GESSPKQTKDIVKTPEPPKDYIHVRARRGQATDSHSLAERVR 422
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+ ++
Sbjct: 423 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNM 482
Query: 338 ERILSKDILHARSGS----------------------AATIGFSSGMNSSRPYPP--GIF 373
+ +++KD+L + S +G + G R P G
Sbjct: 483 DGLIAKDMLQSHGSSPRMLFSTDPTAAFPQLHQPQQGPVQVGVTCGTEGHRMGHPVEGAL 542
Query: 374 QGTM----PSIPGANPQFPPLPQSVLDHEFQSLFQMGY 407
+ TM P I G P + +V D + QS+ QMG+
Sbjct: 543 RRTMNAQPPCIDGYGDSIPQV-ANVWDEDLQSVVQMGF 579
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 85 ALENQGMSST--SNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPE 132
AL QG T NL Q+SSDP F E + FG+ N+ E+ + F PE
Sbjct: 146 ALSIQGPKHTPPHNLAQFSSDPGFAERAARFSCFGNRNYPELATPFNFPE 195
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 147/229 (64%), Gaps = 28/229 (12%)
Query: 207 DPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKP-TKDSSLSGEAPKE-YIHMRAKRG 264
+PS S + +Q E + E N+ K + K +K+ S G+ KE Y+H+RAKRG
Sbjct: 84 NPSASSKNVGDQQTEVSSQPESNSMERDNRKISPKTQSKEDSSDGDGTKENYVHLRAKRG 143
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
QATNSHSLAER+RR+KISERM+LLQ+LVPGCNKITGKAVMLDEIINYVQSLQ+QVEFLSM
Sbjct: 144 QATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSM 203
Query: 325 KLATVNPELNLDIERILSKDILHARS----------GSAATIG-FSSGM-------NSSR 366
KLATVNPEL DIE+ILSK ++ ++ G++A I F+ GM N+S
Sbjct: 204 KLATVNPELGFDIEQILSKQMMLSQDRHLGFYGADPGASALIAHFNQGMMHPDMICNASN 263
Query: 367 PYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAVDS 415
P G GT+ I N Q P + +++ Q++ M ++ A DS
Sbjct: 264 PV--GALHGTIHDISTMN-QMPEMWETL-----QNIPHMNFNPAVAADS 304
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 148/240 (61%), Gaps = 37/240 (15%)
Query: 221 EKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRRE 279
E +QK +Q + K A K K SL + PKE YIH+RA+RGQATNSHSLAERVRRE
Sbjct: 112 ETQQKGDQKPTSTT-SKDAGKQGKQGSLGSDQPKEEYIHVRARRGQATNSHSLAERVRRE 170
Query: 280 KISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIER 339
KISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+L+IE
Sbjct: 171 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEG 230
Query: 340 ILSKD-----ILHARSGSAATIGFSSGMNSSRPYPPG--IFQGTMPS-IPG--------- 382
+L+KD IL + +++ FS M + YPP G +P+ PG
Sbjct: 231 LLAKDVFDPKILQLHAVPPSSLAFSLEMPMA--YPPSHPSQAGLIPTAFPGMNNHSDIIC 288
Query: 383 --ANPQFPPLPQ---------SVLDHEFQSLFQMGYDSTSAVDSLG-----PNGRLKSEL 426
N Q P+ +V D E +++ QM Y++++ DS P G LK EL
Sbjct: 289 RTINSQLTPMTAGFKEPAQLPNVWDDELRNVVQMSYETSAPHDSQDVNKPLPPGHLKVEL 348
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/266 (44%), Positives = 155/266 (58%), Gaps = 40/266 (15%)
Query: 182 KTRKRAPESNSLLNTDKNVEVELQKDPSGDS--SGILKEQDEKKQKIEQNTGANMRGKQA 239
K RK + SLLN PS S + +Q E + E+N+ R
Sbjct: 78 KKRKGIDDCTSLLN------------PSASSRMQNVGDQQTEVSSQTERNSLEENRTISP 125
Query: 240 AKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
+K+ S G+ KE Y+H+RAKRGQATNSHSLAER+RR+KISERM+LLQ+LVPGC+KI
Sbjct: 126 KMQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKI 185
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARS-------- 350
TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNPEL DIE+ILSK ++ ++
Sbjct: 186 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQMMLSQDRHLAFYGA 245
Query: 351 --GSAATIGFSSG-----MNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLF 403
GS+ F+ G M + P G+ GT I N Q P + +++ Q++
Sbjct: 246 DPGSSTLAHFNQGIMQPDMMCNVSNPAGVLHGTFHEISAMN-QMPEMWEAL-----QNIP 299
Query: 404 QMGYDSTSAVDS----LGPNGRLKSE 425
M ++ A DS G +G +K E
Sbjct: 300 DMNFNPAVAADSSTNNAGISGTMKIE 325
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 171/297 (57%), Gaps = 47/297 (15%)
Query: 146 VPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQ 205
+ ++ G Y+ +S +SQ D Q+ +E + GV K RK + +LL+ + + E
Sbjct: 48 LEDRPGLYQSSSGTLSQ---DIQMSDEHSGGV----KKRKGMEDRVTLLHNAGDQQTEGS 100
Query: 206 KDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRG 264
P +S +E +KI +K+ S G+ KE Y+H+RAKRG
Sbjct: 101 SQPERNS------MEEGNRKIS-----------PKMQSKEDSSDGDGTKEDYVHVRAKRG 143
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
QATNSHSLAER+RR+KISERM+LLQ+LVPGCNKITGKAVMLDEIINYVQSLQ+QVEFLSM
Sbjct: 144 QATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSM 203
Query: 325 KLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNS-SRPYPPGIFQ--------- 374
KLATVNPEL DIE+I+SK ++ ++ A G G +S + P+ GI Q
Sbjct: 204 KLATVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPGSSSLTAPFNQGIMQPEMMCNISN 263
Query: 375 ------GTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAVDSLGPNGRLKSE 425
GT+ + N Q P + + V Q++ QM ++ +A +G +K E
Sbjct: 264 PVDVLHGTIHDLSTMN-QIPSMWEGV-----QNMPQMNFNPVAADSGTNNSGSMKIE 314
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 144/230 (62%), Gaps = 23/230 (10%)
Query: 213 SGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHS 271
S + +Q E + E+N+ R +K+ S G+ KE Y+H+RAKRGQATNSHS
Sbjct: 93 SNVGDQQTEVSSQTERNSLEENRTISPKMQSKEDSSDGDGTKEDYVHIRAKRGQATNSHS 152
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
LAER+RR+KISERM+LLQ+LVPGC+KITGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP
Sbjct: 153 LAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 212
Query: 332 ELNLDIERILSKDILHARS----------GSAATIGFSSG-----MNSSRPYPPGIFQGT 376
EL DIE+ILSK ++ ++ GS+ F+ G M + P G+ GT
Sbjct: 213 ELGFDIEQILSKQMMLSQDRHLAFYGADPGSSTLAHFNQGIMQPDMMCNVSNPAGVLHGT 272
Query: 377 MPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSAVDSLGPN-GRLKSE 425
I N Q P + +++ Q++ M ++ A DS N G +K E
Sbjct: 273 FHEISAMN-QMPEMWEAL-----QNIPDMNFNPAVAADSSTNNAGTMKIE 316
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 143/234 (61%), Gaps = 28/234 (11%)
Query: 160 VSQSYEDHQICEEAAIGVATN----------------GKTRKRAPESNSLLNTDKNVEVE 203
VS+ Y DH+ ++A +A N G K+ + ++ D+
Sbjct: 136 VSEGYLDHRSSDKAEPEIAGNQGVPSSEAAGGDCSSKGSDSKKRRRPSEVMGADQVQSSN 195
Query: 204 LQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKR 263
+ D + +S K + E + GK K K+SS ++YIH+RA+R
Sbjct: 196 VAADSANESV------HSKDKGEESSPATTTTGKSKGKGAKESS----EKEDYIHVRARR 245
Query: 264 GQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
GQATNSHSLAER+RREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLS
Sbjct: 246 GQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 305
Query: 324 MKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY--PPGIFQG 375
MKLATVNP L+L+IE +LSKD+L S+++IGFS M + PG+ QG
Sbjct: 306 MKLATVNPRLDLNIEGLLSKDLLRFPGVSSSSIGFSPEMMHPQLQLSQPGLMQG 359
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 111/139 (79%), Gaps = 2/139 (1%)
Query: 221 EKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREK 280
+ KQK Q++ K + K+S+ A ++YIH+RA+RGQATNSHSLAERVRREK
Sbjct: 40 DTKQKGGQDSSTMANAKPSGTNAKNST--DGAKEDYIHVRARRGQATNSHSLAERVRREK 97
Query: 281 ISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERI 340
ISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +IE +
Sbjct: 98 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPTLDFNIEGL 157
Query: 341 LSKDILHARSGSAATIGFS 359
LSKD+L R GS++ IGFS
Sbjct: 158 LSKDLLQLRGGSSSAIGFS 176
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 156/284 (54%), Gaps = 38/284 (13%)
Query: 96 NLDQYSSDPSFVELVPKIPGFGSGNF--SEMVSSFGLPE-------NAQIASSGCPPNYV 146
N+ Q+ +D F+E K FG G ++ SS G+P+ + QI S G +
Sbjct: 73 NMAQFPADSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQDTQIPS-GSKLDNG 131
Query: 147 PNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQK 206
P + R+++ ED Q A G+T + S K+ E
Sbjct: 132 PLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCE----- 186
Query: 207 DPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQA 266
E+++KKQK EQ+ +N + K DS G YIHMRA+RGQA
Sbjct: 187 -----------EEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDG-----YIHMRARRGQA 230
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 326
TNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ Q+EFLSMKL
Sbjct: 231 TNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKL 290
Query: 327 ATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPP 370
+ VNP L+ ++E +L+KD L + SA T N S YPP
Sbjct: 291 SAVNPVLDFNLESLLAKDALQS---SAPTFPH----NMSMLYPP 327
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/164 (58%), Positives = 122/164 (74%), Gaps = 10/164 (6%)
Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERV 276
++DE K+ I + +N GKQ T+D S +APKE YIH+RA+ GQATNSHSLAERV
Sbjct: 232 DKDEPKRPIVTSRKSN--GKQ----TEDKS---DAPKEDYIHIRARSGQATNSHSLAERV 282
Query: 277 RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD 336
RREKISERM+ LQ+LVPGC+K+ GKAVMLDEIINYVQSLQ+QVEFLSMKL+ VNP L+ +
Sbjct: 283 RREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSAVNPALDFN 342
Query: 337 IERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSI 380
IERILSKD+ ++ +++T GF + +PP Q + SI
Sbjct: 343 IERILSKDLFQSQGTASSTFGFLPDIGHQFLHPPKHSQAALHSI 386
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 181/342 (52%), Gaps = 56/342 (16%)
Query: 57 PIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGF 116
P V++N+ + +MV H P++L S S + ++S+DP F E K+ F
Sbjct: 156 PKVNMNK-----IPTMVKH-LVKEGMPLSL-GTSTSLNSTVAEFSADPGFAERAAKLSCF 208
Query: 117 GSGNFSEMVSSFGL--PENAQIAS-------------SGCPPNYVPNKEGCYERNSRN-- 159
GS +F+ + L E AQ +S S P V + + N +
Sbjct: 209 GSRSFNGRTTQLCLNIAELAQRSSPLVENGKKQLPRVSSSPSLKVLGSQMGTQENKNSPL 268
Query: 160 -----VSQSYEDHQICEEAAIGVA-------TNGKTRK-----RAPESNSLLN------- 195
V+ S E+ I E+ G N + RK +A E+++ N
Sbjct: 269 QDLMEVANSQEESAISEQTPNGDTGEKPSPYVNSRKRKGPSKGKAKETSTSTNPPMAAEA 328
Query: 196 -TDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK 254
D N + + G+ +G +K ++E K G N K K +S E PK
Sbjct: 329 SDDSNAKRSKPNEGEGNENGQVKAEEESK-------GGNNSNANDEKQNKSNSKPPEPPK 381
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQS
Sbjct: 382 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 441
Query: 315 LQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI 356
LQ+QVEFLSMKLA+VN L+ IE ++SKDI + + A I
Sbjct: 442 LQRQVEFLSMKLASVNTRLDFSIESLISKDIFQSNNSLAQPI 483
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 147/229 (64%), Gaps = 23/229 (10%)
Query: 166 DHQICEEAAIG----VATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDE 221
D + EAA G T+ ++R P N ++ D+ L D + +S
Sbjct: 168 DGVLSSEAAAGDCSSKGTSDSKKRRRP--NEVMGGDQVQSANLPADSANESV-------H 218
Query: 222 KKQKIEQNTGANMRG--KQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRR 278
K K E+++ A G K K K++S E+ KE YIH+RA+RGQATNSHSLAER+RR
Sbjct: 219 SKDKGEESSPATTTGPGKSKGKGAKETS---ESQKEDYIHVRARRGQATNSHSLAERLRR 275
Query: 279 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE 338
EKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+L+IE
Sbjct: 276 EKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 335
Query: 339 RILSKDILHARSGSAATIGFSSGMNSSRPY--PPGIFQGTMPSIPGANP 385
+LSKD+L ++++GFS M + PG+ QG + ANP
Sbjct: 336 GLLSKDLLRFPGVPSSSLGFSPEMMHPQLQLSQPGLIQGGAAGM--ANP 382
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/306 (40%), Positives = 172/306 (56%), Gaps = 49/306 (16%)
Query: 91 MSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPP------- 143
M+ S++ ++S+DP F E K FGS +F++ G+ NA++A P
Sbjct: 139 MALNSSVAEFSADPGFAERAAKFSCFGSRSFNDRSVQLGV-NNAELAQRSAPAMEHGGKL 197
Query: 144 ---------NYVPNKEGCYERNSRNVSQ---------SYEDHQICEEA---AIGVAT--- 179
+ ++ G E + + Q S E+ I E+A IGV T
Sbjct: 198 PRVSSSPLLKTLGSQMGAQENKNSAIHQEQEKMEGANSQEESTISEQAPNGEIGVKTSQD 257
Query: 180 --NGKTRK-----RAPESNSLLNTDKNVE--VELQKDPSGDSSGILKEQDEKKQKIEQNT 230
N + RK +A E+++ N K VE + S + G E + K + E
Sbjct: 258 MMNSRKRKASSKGKAKETSNSFNPTKGVEGSEDSNSKRSKPNEGDGNENGQVKVEEESKA 317
Query: 231 GANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQE 290
+ K +KP E PK+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+
Sbjct: 318 EEEKQNKSNSKPP-------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQD 370
Query: 291 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARS 350
LVPGCNK+TGKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN ++L IE ++SKD+ + +
Sbjct: 371 LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIENLISKDVFQS-N 429
Query: 351 GSAATI 356
S AT+
Sbjct: 430 NSLATL 435
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 123/169 (72%), Gaps = 6/169 (3%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
+ DS+ + +K ++ TG G+ K K+ G ++YIH+RA+RGQATN
Sbjct: 195 AADSANESVQSKDKGEESSPATGTTTGGRSKGKGAKE----GSEKEDYIHVRARRGQATN 250
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
SHSLAER+RREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLAT
Sbjct: 251 SHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 310
Query: 329 VNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY--PPGIFQG 375
VNP L+L+IE +LSKD+L S++++GFS M + PG+ QG
Sbjct: 311 VNPRLDLNIEGLLSKDLLRFPGVSSSSMGFSPEMMHPQLQLSQPGLMQG 359
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 189/374 (50%), Gaps = 81/374 (21%)
Query: 102 SDPSFVELVPKIPGFGSG-NFSEMVSSFGLPENA---QIASSGCPPNYVPNKEGCYERNS 157
+DP FVE + FGS N S + FG E++ +I ++G + N+
Sbjct: 161 ADPGFVERAARFSCFGSSRNLSGLSGQFGSNESSFLSRIPATGS------------QVNA 208
Query: 158 RNVSQSYEDHQICEEAAIGV---------ATNGKTRKRAPESNSLLNTDKNVEVELQKD- 207
NV Q+ D + + + V A G +R+ + S + + +++V+ D
Sbjct: 209 SNVQQAVADGKPNSDRKLNVISRSSTPENAEFGDSREESSLSEQIPGGELSIKVQNNNDF 268
Query: 208 --------------------PSGDSSGILKEQDEKKQKIEQNTGANMRGKQAA------K 241
PS + E+DE K ++ AN K A K
Sbjct: 269 SVRKRKAIPRGKAKETPSSSPSASDVKVAAEKDESTAKRSKSDEANGHDKAKAEQNGNQK 328
Query: 242 PTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
KD++ E PK+YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TGK
Sbjct: 329 QNKDNTKLPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 388
Query: 302 AVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHA-----------RS 350
AVMLDEIINYVQSLQ+QVEFLSMKLATVNP +++++E LSKD+ + S
Sbjct: 389 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDVNME-ALSKDVFQSFGSLPHSLYPLDS 447
Query: 351 GSAATIGFSSGMNSSRPYPPGI-----FQGTMPSIPGANP--QFPPLP----------QS 393
+A + +S P P + Q +M ++ N Q PPL +
Sbjct: 448 SAALALPYSYQSQQGVPLPNDMSSNAETQFSMNALLRRNHSMQLPPLDGFGDAAARQVSA 507
Query: 394 VLDHEFQSLFQMGY 407
+ E QS+ QMG+
Sbjct: 508 FWEEELQSVVQMGF 521
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 200/392 (51%), Gaps = 76/392 (19%)
Query: 57 PIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGF 116
P+ S + + + +MV+H P +LE MS S + ++S+DP F E K F
Sbjct: 148 PLSSPPKVNTIKIPTMVNH-LVKEGMPPSLETP-MSLNSTVAKFSADPGFAERAAKFSCF 205
Query: 117 GSGNFSEMVSSFGLPENAQIA---------------SSGCPPNYVPNKEGCYE-RNS--- 157
GS + + + GL NA++A SS + ++ G E +NS
Sbjct: 206 GSRSLNGRTTQLGL-NNAELAQRSSLVENGKRLPRVSSSPSLKVLESQMGTQENKNSPLQ 264
Query: 158 --RNVSQSYEDHQICEEAAIGVA-------TNGKTRK-----RAPESNSLLN-------- 195
++ S E+ I E+ G N + RK +A E+++ +N
Sbjct: 265 DLMELANSQEESTISEQTPNGDTGVKPSPYVNSRKRKGPSKGKAKETSASINPPMGLSLQ 324
Query: 196 -----TDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSG 250
D N + G+ +G +K ++E K N+ AN K K +S
Sbjct: 325 AAEASEDWNAKRSKPNAGEGNENGQVKAEEESKGG---NSNAN-----DEKQNKSNSKPP 376
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIIN
Sbjct: 377 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 436
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPP 370
YVQSLQ+QVEFLSMKLA+VN L+ IE ++SKDI + N+S +P
Sbjct: 437 YVQSLQRQVEFLSMKLASVNTRLDFSIESLISKDIFQS--------------NNSLAHPI 482
Query: 371 GIFQGTMPSIPGANPQFPP-----LPQSVLDH 397
+ + P G +PQ P +P + H
Sbjct: 483 FLIDSSAPPFYGQHPQPNPAVHNNIPNGTMTH 514
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 192/388 (49%), Gaps = 64/388 (16%)
Query: 91 MSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPP------- 143
M S++ ++++DP F E K FGS +F+ +S GL NA++A+ GC P
Sbjct: 164 MGLNSSVAEFTADPGFAERAAKFSCFGSRSFNGRISQLGL-NNAEMAN-GCNPLMGNGKL 221
Query: 144 -------------NYVPNKEGCYERNSR--NVSQSYEDHQICE-EAAIGVATNGKTRKR- 186
+ NK + S N +S QI EA + + +RKR
Sbjct: 222 ARVASSPLLKAVGSQKGNKSTPLQDRSELTNSQESSVSEQIPSGEAGLKASNELNSRKRK 281
Query: 187 APESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKD- 245
A + N KD D + K K + E+N + ++ ++ K + D
Sbjct: 282 ALSKGKAKQSASNPPASATKDAETDDNSNTKRI--KPNEGEENENSPVKAEEEPKGSGDD 339
Query: 246 -----SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
+S E PK+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TG
Sbjct: 340 IQNKANSRPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 399
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHAR----------S 350
KA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L+ +++ ++SKDI +
Sbjct: 400 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNMDTLISKDIFQSSQPLPHPIFPLD 459
Query: 351 GSAATIGFSSGMNSSRPYPPGIFQGTMPSIP-----------GANPQFPPLP-------- 391
SA FS + P I G + N Q PPL
Sbjct: 460 SSAPAAIFSHQQQQNPPLHSNISNGAVTHCSVDPLDTTGLCQTLNAQLPPLDGFTQNAHQ 519
Query: 392 -QSVLDHEFQSLFQMGYDSTSAVDSLGP 418
+ + + Q++ QMGY +++ P
Sbjct: 520 YPTFCEDDLQTIVQMGYGQNPNLETFLP 547
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 108/135 (80%), Gaps = 4/135 (2%)
Query: 237 KQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGC 295
K A K K S +APKE YIH+RA+RGQATNSHSLAERVRREKISERMRLLQ+LVPGC
Sbjct: 318 KPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGC 377
Query: 296 NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAAT 355
+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+ +IE +L+K+ + +++G +
Sbjct: 378 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQSKAG-PSL 436
Query: 356 IGFSSGMNSSRPYPP 370
GF M PY P
Sbjct: 437 FGFPPDM--PVPYLP 449
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 108/135 (80%), Gaps = 4/135 (2%)
Query: 237 KQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGC 295
K A K K S +APKE YIH+RA+RGQATNSHSLAERVRREKISERMRLLQ+LVPGC
Sbjct: 318 KPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGC 377
Query: 296 NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAAT 355
+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+ +IE +L+K+ + +++G +
Sbjct: 378 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQSKAG-PSL 436
Query: 356 IGFSSGMNSSRPYPP 370
GF M PY P
Sbjct: 437 FGFPPDM--PVPYLP 449
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 141/209 (67%), Gaps = 12/209 (5%)
Query: 179 TNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQ 238
T+ ++R P N ++ D+ L D S + S K++ E+ TG GK
Sbjct: 181 TSDSKKRRRP--NEVMGGDQVQSSNLPAD-SANESVHSKDKGEESSLATTTTGP---GKS 234
Query: 239 AAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
K +++S S + ++YIH+RA+RGQATNSHSLAER+RREKISERM+LLQ+LVPGC+K+
Sbjct: 235 KGKGARETSESQK--EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKV 292
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+L+IE +LSKD+L ++++GF
Sbjct: 293 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSSSLGF 352
Query: 359 SSGMNSSRPY--PPGIFQGTMPSIPGANP 385
S M + PG+ QG + ANP
Sbjct: 353 SPEMMHPQLQLSQPGLIQGGAAGM--ANP 379
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 159/275 (57%), Gaps = 15/275 (5%)
Query: 89 QGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPN 148
+ M+ S + ++SSDP F K GS +F+ S GL NA++ S P+ + N
Sbjct: 105 KSMALNSTVAEFSSDPGFAARAAKFSCIGSRSFNGRGSQLGLNNNAELTQSQRSPSLMEN 164
Query: 149 KEGCYERNS----RNVSQSYEDHQICEEAAIGV-----ATNGKTRK---RAPESNSLLNT 196
+S + + E EE+ I N + RK R ++ +T
Sbjct: 165 GMLLPRVSSSPSLKLLGSQMEGTNSQEESTISEQKPSPCVNSRKRKASSRGKAKETVNST 224
Query: 197 DKNVEVELQKDPSGDSSGILKEQDEKKQ---KIEQNTGANMRGKQAAKPTKDSSLSGEAP 253
+ ++ E +D + +++ ++K K E+++ A K SS E P
Sbjct: 225 NPPMDAEASEDQNAKRGKPNEDEGKEKNGSVKAEEDSKAGTSSGGDEKQNMSSSKPPEPP 284
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
K+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYV+
Sbjct: 285 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVR 344
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHA 348
SLQ+QVEFLSMKL++VN L+ E ++SKDI +
Sbjct: 345 SLQRQVEFLSMKLSSVNTRLDFSTESLISKDIFQS 379
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 153/265 (57%), Gaps = 12/265 (4%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQ-IASSGCPPNYVPNKEGCYER 155
L + D F+E + FG G + +G + A A G + +
Sbjct: 94 LGHFPVDSGFIERAARSTCFGGGMMAG--GPYGAADQAMGDAFGGTAEGLMDHHRNVGND 151
Query: 156 NSRNVSQSYEDHQICEEAAIG-VATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSG 214
+ + + D E A G ++ G K+ N ++ TD+ L D + +S
Sbjct: 152 KAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANES-- 209
Query: 215 ILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAE 274
+ +D+ ++ T + AK T +S +EYIH+RA+RGQATNSHSLAE
Sbjct: 210 -VHSKDKGEESSPATTNGGKSKGKGAKETSESQ-----KEEYIHVRARRGQATNSHSLAE 263
Query: 275 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN 334
R+RREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+
Sbjct: 264 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 323
Query: 335 LDIERILSKDILHARSGSAATIGFS 359
L+IE +LSKD+L +++IGFS
Sbjct: 324 LNIEGLLSKDLLRFPGVPSSSIGFS 348
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 129/190 (67%), Gaps = 23/190 (12%)
Query: 243 TKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
+K+ S G+ KE Y+H+RAKRGQATNSHSLAER+RR+KISERM+LLQ+LVPGC+KITGK
Sbjct: 121 SKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGK 180
Query: 302 AVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSG 361
AVMLDEIINYVQSLQ+QVEFLSMKL+TVNPEL DIE+I+SK ++ ++ A G G
Sbjct: 181 AVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG 240
Query: 362 MNS-SRPYPPGIFQ---------------GTMPSIPGANPQFPPLPQSVLDHEFQSLFQM 405
+S + P+ GI Q GT+ + N Q P + + + QS+ QM
Sbjct: 241 SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMN-QIPSMWEGL-----QSMPQM 294
Query: 406 GYDSTSAVDS 415
++ A DS
Sbjct: 295 NFNPGVAADS 304
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 154/278 (55%), Gaps = 30/278 (10%)
Query: 166 DHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQK 225
D ++ + G + ++KR E + + K V E++ + I E E K
Sbjct: 98 DPKLIHSSIAGKDKDNSSKKRKAEKSHHNSKLKVVVGEIEIENKDKRIKIGSEDGESKIT 157
Query: 226 IEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERM 285
NT N + + ++S +S +YIH+RA+RGQAT+SHSLAERVRREKISERM
Sbjct: 158 GNPNTKKNCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERM 217
Query: 286 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
+ LQ+LVPGCNKITGKA MLDEIINYVQSLQ+QVEFLSMKLATVNP L+ +I+ + K++
Sbjct: 218 KYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEV 277
Query: 346 LHARSGSAA--TIGFSSGMNSSRPYPP-----------GIFQGTMP---------SIPGA 383
+A+ +G S+G+NS+ PY G+ G P S P +
Sbjct: 278 FPNCDANASFQAMGMSTGLNSNNPYLQFNSPQQFVPYGGLDAGMNPSDMGLRRSISAPVS 337
Query: 384 NPQF--------PPLPQSVLDHEFQSLFQMGYDSTSAV 413
PQ LP ++ + +FQ+L+ +D A
Sbjct: 338 IPQTFIDSSCFSQILPSTIWEGDFQNLYNFNFDQARAT 375
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 153/265 (57%), Gaps = 12/265 (4%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQ-IASSGCPPNYVPNKEGCYER 155
L + D F+E + FG G + +G + A A G + +
Sbjct: 94 LGHFPVDSGFIERAARSTCFGGGMMAG--GPYGAADQAMGDAFGGTAEGLMDHHRNVGND 151
Query: 156 NSRNVSQSYEDHQICEEAAIG-VATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSG 214
+ + + D E A G ++ G K+ N ++ TD+ L D + +S
Sbjct: 152 KAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANES-- 209
Query: 215 ILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAE 274
+ +D+ ++ T + AK T +S +EYIH+RA+RGQATNSHSLAE
Sbjct: 210 -VHSKDKGEESSPATTNGGKSKGKGAKETYESQ-----KEEYIHVRARRGQATNSHSLAE 263
Query: 275 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN 334
R+RREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+
Sbjct: 264 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 323
Query: 335 LDIERILSKDILHARSGSAATIGFS 359
L+IE +LSKD+L +++IGFS
Sbjct: 324 LNIEGLLSKDLLRFPGVPSSSIGFS 348
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/260 (43%), Positives = 152/260 (58%), Gaps = 27/260 (10%)
Query: 171 EEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNT 230
E A ++ G K+ N ++ TD+ L D + +S + +D+ ++ T
Sbjct: 549 EVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANES---VHSKDKGEESSPATT 605
Query: 231 GANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQE 290
+ AK T +S +EYIH+RA+RGQATNSHSLAER+RREKISERM+LLQ+
Sbjct: 606 NGGKSKGKGAKETSESQ-----KEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQD 660
Query: 291 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARS 350
LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+L+IE +LSKD+L
Sbjct: 661 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPG 720
Query: 351 GSAATIGFSSGMNSSRPY--PPGIFQGTMPSIPGANPQF--------------PPLPQSV 394
+++IGFS M + PG+ G + ANP +P S
Sbjct: 721 VPSSSIGFSPEMMHPQLQLSQPGLIHGGTAGM--ANPDVFRRIIQAQLGAKDGSQMPHS- 777
Query: 395 LDHEFQSLFQMGYDSTSAVD 414
L+ F + QM Y S + D
Sbjct: 778 LNGSFSDVSQMAYPSLGSQD 797
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 154/279 (55%), Gaps = 31/279 (11%)
Query: 166 DHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQK 225
D ++ + G + ++KR E + + K V E++ + I E E K
Sbjct: 98 DPKLIHSSIAGKDKDNSSKKRKAEKSHHNSKLKVVVGEIEIENKDKRIKIGSEDGESKIT 157
Query: 226 IEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERM 285
NT N + + ++S +S +YIH+RA+RGQAT+SHSLAERVRREKISERM
Sbjct: 158 GNPNTKKNCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERM 217
Query: 286 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
+ LQ+LVPGCNKITGKA MLDEIINYVQSLQ+QVEFLSMKLATVNP L+ +I+ + K++
Sbjct: 218 KYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEV 277
Query: 346 LHARSGSAA--TIGFSSGMNSSRPYPP-----------GIFQGTMP---------SIPGA 383
+A+ +G S+G+NS+ PY G+ G P S P +
Sbjct: 278 FPNCDANASFQAMGMSTGLNSNNPYLQFNSPQQFVPYGGLDAGMNPSDMGLRRSISAPVS 337
Query: 384 NPQF---------PPLPQSVLDHEFQSLFQMGYDSTSAV 413
PQ LP ++ + +FQ+L+ +D A
Sbjct: 338 IPQTFIDSSCFSQQILPSTIWEGDFQNLYNFNFDQARAT 376
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 175/326 (53%), Gaps = 54/326 (16%)
Query: 47 PDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPV-------ALENQGMSSTSNLDQ 99
P YG+G L +S M + A YP LEN + +LDQ
Sbjct: 53 PQQHYGAG----TPLGSPTKLNLSMMGQYRHHAHQYPPPQVGGLPTLEN--LMPMGSLDQ 106
Query: 100 YSSDPSFVELVPKIPGFGS-GNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSR 158
+ +DP F + ++ GF + G + + FGLP++ P + E R+
Sbjct: 107 FLADPGFAQRAARLSGFDARGGYG---AQFGLPDDG-------PVGALKELELGSARDDS 156
Query: 159 NVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSL-LNTDKNVEVELQKDPSGDSSGILK 217
+VS A G A++G RKR S D +V KD +L
Sbjct: 157 SVSDPASASAGAGMALKG-ASDGNARKRKAAGGSKGKGKDASVSTTSAKD-------LLA 208
Query: 218 EQDEKKQKI--------EQNTGANMRGKQA--------AKPTKD-SSLSGEAPKEYIHMR 260
++D ++ E+N+G +GK A K KD +S E PK++IH+R
Sbjct: 209 KEDSASKRCKSMSMEDGEENSG---KGKAAQSSSENGGKKQGKDGASKLPEPPKDFIHVR 265
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+QVE
Sbjct: 266 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 325
Query: 321 FLSMKLATVNPELNL-DIERILSKDI 345
FLSMKLATVNP+L+ ++ +L+KD+
Sbjct: 326 FLSMKLATVNPQLDFNNLPNLLAKDM 351
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 175/326 (53%), Gaps = 54/326 (16%)
Query: 47 PDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPV-------ALENQGMSSTSNLDQ 99
P YG+G L +S M + A YP LEN + +LDQ
Sbjct: 53 PQQHYGAG----TPLGSPTKLNLSMMGQYRHHAHQYPPPQVGGLPTLEN--LMPMDSLDQ 106
Query: 100 YSSDPSFVELVPKIPGFGS-GNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSR 158
+ +DP F + ++ GF + G + + FGLP++ P + E R+
Sbjct: 107 FLADPGFAQRAARLSGFDARGGYG---AQFGLPDDG-------PVGALKELELGSARDDS 156
Query: 159 NVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSL-LNTDKNVEVELQKDPSGDSSGILK 217
+VS A G A++G RKR S D +V KD +L
Sbjct: 157 SVSDPASASAGAGMALKG-ASDGNARKRKAAGGSKGKGKDASVSTTSAKD-------LLA 208
Query: 218 EQDEKKQKI--------EQNTGANMRGKQA--------AKPTKD-SSLSGEAPKEYIHMR 260
++D ++ E+N+G +GK A K KD +S E PK++IH+R
Sbjct: 209 KEDSASKRCKSMSMEDGEENSG---KGKAAQSSSENGGKKQGKDGASKLPEPPKDFIHVR 265
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+QVE
Sbjct: 266 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 325
Query: 321 FLSMKLATVNPELNL-DIERILSKDI 345
FLSMKLATVNP+L+ ++ +L+KD+
Sbjct: 326 FLSMKLATVNPQLDFNNLPNLLAKDM 351
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 128/190 (67%), Gaps = 23/190 (12%)
Query: 243 TKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
+K+ S G+ KE Y+H+RAKRGQATNSHSLAER+RR+KISERM+LLQ+LVPGC+KITGK
Sbjct: 14 SKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGK 73
Query: 302 AVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSG 361
AVMLDEIINYVQSLQ+QVEFLSMKL+TVNPEL DIE+I+SK ++ ++ A G G
Sbjct: 74 AVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG 133
Query: 362 MNS-SRPYPPGIFQ---------------GTMPSIPGANPQFPPLPQSVLDHEFQSLFQM 405
+S + P+ GI Q GT+ + N Q P + + QS+ QM
Sbjct: 134 SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMN-QIPSMWEG-----LQSMPQM 187
Query: 406 GYDSTSAVDS 415
++ A DS
Sbjct: 188 NFNPGVAADS 197
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 109/136 (80%), Gaps = 6/136 (4%)
Query: 243 TKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
+K+ S G+ KE Y+H+RAKRGQATNSHSLAER+RR+KISERM+LLQ+LVPGC+KITGK
Sbjct: 89 SKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGK 148
Query: 302 AVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF--- 358
AVMLDEIINYVQSLQ+QVEFLSMKLATVNPEL DIE+I+SK +L ++ A G
Sbjct: 149 AVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQIISKQMLLSQDRHLAFYGVEPG 208
Query: 359 SSGMNSSRPYPPGIFQ 374
SSG+ P+ GI Q
Sbjct: 209 SSGLTG--PFNQGIMQ 222
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 151/264 (57%), Gaps = 26/264 (9%)
Query: 96 NLDQYSSDPSFVELVPKIPGFGSGNFSEMV-------SSFGLPENAQIASSGCPPNYVPN 148
+LDQ+ +DP F E ++ GF + + FGLP+ +S
Sbjct: 113 HLDQFLADPGFAERAARLSGFDARGGGGGGGYGGAGPAQFGLPDAGAAGAS--------- 163
Query: 149 KEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDP 208
KE N+R+ S + E A++G RKR ++D
Sbjct: 164 KE-MELGNTRDESSVSDPAPGGAEIPPKGASDGNARKRKASGKGKGKDSPMSTSAAKEDS 222
Query: 209 SG------DSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAK 262
SG + S E++ K K Q+ N GK+ K + SS E PK+YIH+RA+
Sbjct: 223 SGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDS--SSKPPEPPKDYIHVRAR 280
Query: 263 RGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+QVEFL
Sbjct: 281 RGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 340
Query: 323 SMKLATVNPELNL-DIERILSKDI 345
SMKLATVNP+L+ ++ +L+KD+
Sbjct: 341 SMKLATVNPQLDFNNLPNLLAKDM 364
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 110/152 (72%), Gaps = 10/152 (6%)
Query: 208 PSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKD----------SSLSGEAPKEYI 257
PS + E DE K K ++ N K AK ++ +S E PK+YI
Sbjct: 308 PSASDVKVAAENDESKAKRSKSDETNGSDKDTAKEKEEENGNQKQNKNNSKPPEPPKDYI 367
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+
Sbjct: 368 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 427
Query: 318 QVEFLSMKLATVNPELNLDIERILSKDILHAR 349
QVEFLSMKL++VNP + +++E +LSKDI +R
Sbjct: 428 QVEFLSMKLSSVNPRMEINMETLLSKDIFQSR 459
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/226 (46%), Positives = 141/226 (62%), Gaps = 23/226 (10%)
Query: 146 VPNKE--GCYERNS--RNVSQSYEDHQICEEAAIG-------VATNGKTRKRAPESNSLL 194
+PNK+ + R+S N S E + E+ IG TN + RK +
Sbjct: 233 IPNKKVSNRFSRSSTPENAGDSREGSSVSEQNPIGESGLKGKAETNTRKRKSVQTGQA-- 290
Query: 195 NTDKNVEVELQK-DPSGDSSGILKEQDEKKQKIEQNTG---ANMRGKQAAKPTKDSSLSG 250
K+V+ ++ +P+G +K + K++I+ G A G K DSS
Sbjct: 291 ---KDVKAAVENHEPNGKK---IKPDEVTKKEIDGAKGKAEAKSSGDANQKQNNDSSKPP 344
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQAT+SHSLAERVRREKIS+RM+ LQ+LVPGCNK+TGKAVMLDEIIN
Sbjct: 345 EPPKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIIN 404
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI 356
YVQSLQ+QVEFLSMKLATVNP ++ ++E ++ KDI S+ T+
Sbjct: 405 YVQSLQRQVEFLSMKLATVNPRMDFNMETLVPKDIFKGPGSSSHTV 450
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 97/109 (88%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
K KD+S E PK+YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TG
Sbjct: 9 KQKKDNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 68
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHAR 349
KAVMLDEIINYVQSLQ+QVEFLSMK+ATVNP++ +++E LSKDI +R
Sbjct: 69 KAVMLDEIINYVQSLQRQVEFLSMKMATVNPKMEINMETFLSKDIFQSR 117
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/266 (42%), Positives = 151/266 (56%), Gaps = 27/266 (10%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERN 156
LD++ DP F ++ F + F S FGLP PP VP G E
Sbjct: 40 LDKFCGDPGFAARAARLSSFSAQRFPGAASLFGLP----------PP--VPAASGGGE-- 85
Query: 157 SRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGD----S 212
+ S E + + A+ + +++AP + + +V+ QKDP
Sbjct: 86 ---FAGSREASSVSDPASAMMKDANAKKRKAPPAAKGKGKESSVQAGEQKDPDTKRCKTE 142
Query: 213 SGILKEQDEKKQKIEQ--NTGANMRGKQAAKP---TKDSSLSGEAPKEYIHMRAKRGQAT 267
G KE K K EQ + + G Q KP K++ L E PK+Y+H+RA+RGQAT
Sbjct: 143 GGEGKEGSPVKPKPEQAGSDSSVEDGGQTQKPPGKGKNAKLV-EPPKDYVHVRARRGQAT 201
Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 327
+SHSLAERVRRE+IS+RM++LQ+LVPGCNK+ GKA+MLDEIINYVQSLQ+QVEFLSMKLA
Sbjct: 202 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLA 261
Query: 328 TVNPELNLDIERILSKDILHARSGSA 353
TVNP ++ +L KD+ A SA
Sbjct: 262 TVNPLDFSNLPTLLQKDMFQACGPSA 287
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/105 (75%), Positives = 97/105 (92%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQATNSHSLAER+RREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQ
Sbjct: 251 EDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 310
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
SLQ+QVEFLSMKLATVNP L+L+IE +LSKD+L ++++GF
Sbjct: 311 SLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGAPSSSLGF 355
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/105 (75%), Positives = 97/105 (92%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQATNSHSLAER+RREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQ
Sbjct: 241 EDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 300
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
SLQ+QVEFLSMKLATVNP L+L+IE +LSKD+L ++++GF
Sbjct: 301 SLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGAPSSSLGF 345
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 140/221 (63%), Gaps = 19/221 (8%)
Query: 143 PNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEV 202
P + ++EG Y + Q+ Q+ ++ + G K RK + +LLN + +
Sbjct: 46 PMVLEDREGLYRSPNGTFCQNI---QLSDDHSSG----AKRRKGIDDHIALLNPSASSRI 98
Query: 203 ELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAK-PTKDSSLSGEAPKE-YIHMR 260
+ GD + Q E+ E N K +K +K+ S G+ KE Y+H+R
Sbjct: 99 Q----NVGDQQTEVSSQQERISMEEDNQ------KSCSKMQSKEDSSDGDGTKEDYVHVR 148
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKRGQATNSHSLAER+RR+KISERM+LLQ+LVPGC+KITGKAVMLDEIINYVQSLQ+QVE
Sbjct: 149 AKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVE 208
Query: 321 FLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSG 361
FLSMKLATVNPEL+ DIE+ILSK ++ ++ A G G
Sbjct: 209 FLSMKLATVNPELSFDIEQILSKQMMLSQDRHLAFYGVDPG 249
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 164/298 (55%), Gaps = 46/298 (15%)
Query: 95 SNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPP----------- 143
S++ ++S+DP F E K FGS +F++ + NA++A P
Sbjct: 178 SSVAEFSADPGFAERAAKFSCFGSRSFNDRSVQLRV-NNAELAQRSAPAMEHGGKLPRVS 236
Query: 144 -----NYVPNKEGCYERNSRNVSQ---------SYEDHQICEEA---AIGVAT-----NG 181
+ ++ G E + + Q S E+ I E+ IGV T N
Sbjct: 237 SSPLLKTLGSQMGAQENKNSAIHQEQEKMEGANSQEESTISEQTPNGEIGVKTSQDIMNS 296
Query: 182 KTRK-----RAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRG 236
+ RK +A E+++ N K VE + S E +E Q +
Sbjct: 297 RKRKASSKGKAKETSNTTNPTKGVE---GSEYSNSKRSKPNEGNENGQVKVEEESKAEEE 353
Query: 237 KQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
KQ+ K +S E PK+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCN
Sbjct: 354 KQS----KSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 409
Query: 297 KITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAA 354
K+TGKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN ++L IE +++KD+ + + A
Sbjct: 410 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIESLVTKDVFQSNNSLAT 467
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 133/191 (69%), Gaps = 14/191 (7%)
Query: 169 ICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQ 228
+C++ V++ K RKR+ + D+ V+ +Q+ ++ + K++ + +K
Sbjct: 184 VCQDEGPSVSS-AKKRKRSGQ-------DRGVK-HVQEGSQQLATVVAKQEKDNDEKDGP 234
Query: 229 NTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRL 287
+ K K T+D+S +APKE YIH+RA+ GQATNSHSLAERVRREKISERM+
Sbjct: 235 KRPISASRKSNGKQTEDNS---DAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKF 291
Query: 288 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILH 347
LQ+LVPGC+K+ GKAVMLDEIINYVQSLQ+QVEFLSMKL+TVNP L+ +IERILSKD
Sbjct: 292 LQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQ 351
Query: 348 ARSGSAATIGF 358
++ G+ A+ F
Sbjct: 352 SQ-GTPASSAF 361
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 133/191 (69%), Gaps = 14/191 (7%)
Query: 169 ICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQ 228
+C++ V++ K RKR+ + D+ V+ +Q+ ++ + K++ + +K
Sbjct: 184 VCQDEGPSVSS-AKKRKRSGQ-------DRGVK-HVQEGSQQLATVVAKQEKDNDEKDGP 234
Query: 229 NTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRL 287
+ K K T+D+S +APKE YIH+RA+ GQATNSHSLAERVRREKISERM+
Sbjct: 235 KRPISASRKSNGKQTEDNS---DAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKF 291
Query: 288 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILH 347
LQ+LVPGC+K+ GKAVMLDEIINYVQSLQ+QVEFLSMKL+TVNP L+ +IERILSKD
Sbjct: 292 LQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQ 351
Query: 348 ARSGSAATIGF 358
++ G+ A+ F
Sbjct: 352 SQ-GTPASSAF 361
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 145/268 (54%), Gaps = 50/268 (18%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERN 156
L+ P F E ++ G G+G FGLP GC R
Sbjct: 31 LETLCGGPGFAERAARLCGGGAG-------LFGLPAVGNAERGGC------------SRE 71
Query: 157 SRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGIL 216
+VS H A G + +++AP S + DK+ V P G
Sbjct: 72 GSSVSDPAWAH------ATGGGGDNARKRKAPAS-AAAGKDKDAVVGGGSSPC--EVGEA 122
Query: 217 KEQDEKKQKIEQN-----------TGANM----RGKQAAKPTKDSSLSGEAPKEYIHMRA 261
K D KK K E N G + +GK ++KP + E PK+Y+H+RA
Sbjct: 123 KAPDSKKCKAEVNPKVEEAASDGSVGDRVQKQGKGKNSSKP------AAEPPKDYVHVRA 176
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+RGQAT+SHSLAERVRREKIS+RM++LQ+LVPGCNK+ GKA+MLDEIINYVQSLQQQVEF
Sbjct: 177 RRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 236
Query: 322 LSMKLATVNPELNL-DIERILSKDILHA 348
LSMKLATVNP+L+ ++ +L KD+ +
Sbjct: 237 LSMKLATVNPQLDFGNLSTLLQKDMFQS 264
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 112/154 (72%), Gaps = 12/154 (7%)
Query: 217 KEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERV 276
+E+++KKQK EQ+ +N + K DS G YIHMRA+RGQATNSHSLAERV
Sbjct: 135 EEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDG-----YIHMRARRGQATNSHSLAERV 189
Query: 277 RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD 336
RREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ Q+EFLSMKL+ VNP L+ +
Sbjct: 190 RREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFN 249
Query: 337 IERILSKDILHARSGSAATIGFSSGMNSSRPYPP 370
+E +L+KD L + SA T N S YPP
Sbjct: 250 LESLLAKDALQS---SAPTFPH----NMSMLYPP 276
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 145/268 (54%), Gaps = 50/268 (18%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERN 156
L+ P F E ++ G G+G FGLP GC R
Sbjct: 31 LETLCGGPGFAERAARLCGGGAG-------LFGLPAVGNAERGGC------------SRE 71
Query: 157 SRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGIL 216
+VS H A G + +++AP S + DK+ V P G
Sbjct: 72 GSSVSDPAWAH------ATGGGGDNARKRKAPAS-AAAGKDKDAVVGGGSSPC--EVGEA 122
Query: 217 KEQDEKKQKIEQN-----------TGANM----RGKQAAKPTKDSSLSGEAPKEYIHMRA 261
K D KK K E N G + +GK ++KP + E PK+Y+H+RA
Sbjct: 123 KAPDSKKCKAEVNPKVEEAASDGSVGDRVQKQGKGKNSSKP------AAEPPKDYVHVRA 176
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+RGQAT+SHSLAERVRREKIS+RM++LQ+LVPGCNK+ GKA+MLDEIINYVQSLQQQVEF
Sbjct: 177 RRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 236
Query: 322 LSMKLATVNPELNL-DIERILSKDILHA 348
LSMKLATVNP+L+ ++ +L KD+ +
Sbjct: 237 LSMKLATVNPQLDFGNLSTLLQKDMFQS 264
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 95/110 (86%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
K K+++ E PK+YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TG
Sbjct: 355 KSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 414
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARS 350
KAVMLDEIINYVQSLQ+QVEFLSMKLA VNP L ++E +L K++ H R+
Sbjct: 415 KAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVESLLGKEVPHGRA 464
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 111/152 (73%), Gaps = 12/152 (7%)
Query: 219 QDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRR 278
+++K QK EQ++ +N+ + K DS G YIHMRA+RGQATNSHSLAERVRR
Sbjct: 133 EEDKMQKDEQSSNSNVNKTNSEKQASDSLKDG-----YIHMRARRGQATNSHSLAERVRR 187
Query: 279 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE 338
EKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ Q+EFLSMKL+ VNP L+ ++E
Sbjct: 188 EKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLE 247
Query: 339 RILSKDILHARSGSAATIGFSSGMNSSRPYPP 370
+L+KD L + SA T N S YPP
Sbjct: 248 SLLAKDALQS---SAPTF----PQNMSMLYPP 272
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 175/337 (51%), Gaps = 41/337 (12%)
Query: 103 DPSFVELVPKIPGFGSGNFS--EMVSSFGLPE------NAQIASSGCPPNYVPNKEGCYE 154
DP F E + FGS +F+ ++ + FG N +++ P+
Sbjct: 59 DPGFAERAARFSCFGSRSFNGRQLTNEFGNYRSHLSIGNEKLSRVSSSPSLKALGSEMNL 118
Query: 155 RNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSG 214
+ +N S S ED + TN + RK + K E ++ P +S
Sbjct: 119 QEHKNNSSSQEDESSLSNQDKTI-TNPRKRK-------AITKAKLKEPVVEATPEKESPK 170
Query: 215 ILKEQDEKKQ-KIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLA 273
LK + K+ K E++ N + TK +S EAPK+YIH+RA+RGQAT+SHSLA
Sbjct: 171 KLKTVERKENVKTEEDLKKNDENSAEERQTKANSKPPEAPKDYIHVRARRGQATDSHSLA 230
Query: 274 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN-PE 332
ERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSLQ QVEFLSMKLA+VN
Sbjct: 231 ERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTR 290
Query: 333 LNLDIERILSKDILHARSGS----------AATIGFSSGMNSSRPYPPGIFQGTMPSIPG 382
++ +++ ++S ++ S ++T F NSS P + S+
Sbjct: 291 VDFNVDSLISSKQMYQSGTSLTHPQISPIDSSTSSFYGHQNSSLPTTSHCSVDPIDSVLC 350
Query: 383 AN--PQFPPLPQSVL----------DHEFQSLFQMGY 407
N Q PPL S L + E QS+ QMG+
Sbjct: 351 QNLPIQLPPL-NSFLQNPSQYPNFGEDELQSIVQMGF 386
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 104/125 (83%), Gaps = 5/125 (4%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQATNSHSLAER+RREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQ
Sbjct: 252 EDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 311
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIF 373
SLQ+QVEFLSMKLATVNP L+ +IE +LSKD+L ++++GF M +PP +
Sbjct: 312 SLQRQVEFLSMKLATVNPRLD-NIEGLLSKDLLRFPGAPSSSLGFPPEMM----HPPQLL 366
Query: 374 QGTMP 378
Q + P
Sbjct: 367 QLSQP 371
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 159/265 (60%), Gaps = 38/265 (14%)
Query: 96 NLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYER 155
+LDQ+ +DP F E ++ SG FGLP++ I + + E R
Sbjct: 116 SLDQFLADPGFAERAARL----SGFGGPGPGQFGLPDDGPIGA-------LKELELGNAR 164
Query: 156 NSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPES------NSLLNTDKNVEVELQKDPS 209
+ +VS E A+ A +G RKR S +S+ + K++ L K+ S
Sbjct: 165 DESSVSDP------ASEMALKGAPDGNARKRKAGSKGKGKDSSMSTSAKDL---LAKEDS 215
Query: 210 G--------DSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRA 261
+S+G E++ K K Q++ N GK+ K S L E PK+YIH+RA
Sbjct: 216 AAKRCKSMEESNGA--EENCAKGKAAQSSSENGGGKKQGKDAGASKLP-EPPKDYIHVRA 272
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+QVEF
Sbjct: 273 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 332
Query: 322 LSMKLATVNPELNL-DIERILSKDI 345
LSMKLATVNP+L+ ++ +L+KD+
Sbjct: 333 LSMKLATVNPQLDFNNLPNLLAKDM 357
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 163/294 (55%), Gaps = 29/294 (9%)
Query: 97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSS-FGLPENAQIASSGCPPNYVPNKEGCYER 155
LD++ DP F E ++ F F + FG+P A AS+G + G R
Sbjct: 35 LDKFCGDPGFAERAARLSSFNGQRFPGAAAGLFGMPPPAPAASNG-------DFGGAGSR 87
Query: 156 NSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGI 215
+ +VS A A+ K + R P ++ E++ ++ +GD+
Sbjct: 88 EASSVSDPASGMMKDANAKKRKASAAKGKAREPSLSTSGQVGDQKELDAKRCRTGDAE-- 145
Query: 216 LKEQDEKKQKIEQ--------NTGANMRGK-QAAKPTKDSSLSGEAPKEYIHMRAKRGQA 266
K+ K K EQ + G +GK + AKP E PK+Y+H+RA+RGQA
Sbjct: 146 -KKTAPVKPKAEQARSGSSVEDYGEPKKGKGKNAKPV-------EPPKDYVHVRARRGQA 197
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 326
T+SHSLAERVRRE+IS+RM+ LQ+LVPGCNK+ GKA+MLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 198 TDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKL 257
Query: 327 ATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPP--GIFQGTMP 378
ATVNP ++ +L KD+ A SA+++ NS+ P+ +FQ +P
Sbjct: 258 ATVNPLDFSNLPTLLHKDMYQACGPSASSVFSLESSNSAFPFSDQGDVFQSFVP 311
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 116/173 (67%), Gaps = 17/173 (9%)
Query: 249 SGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
+GE KE Y+H+RA+ QATNSHS+AE++RREKISERM+LLQ+LVPGC+K+TGKAVMLDE
Sbjct: 137 AGERQKEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDE 196
Query: 308 IINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDIL---HARSGSAATIGFSSGMNS 364
IINYVQSLQ+QVEFLSMKL+TVNP L +DIE +L+KDIL A S + FS M
Sbjct: 197 IINYVQSLQRQVEFLSMKLSTVNPRLGVDIELLLAKDILPFSWASSTGPMGLSFSQEMM- 255
Query: 365 SRPYPPGIFQGTMPSIPGANPQF----------PPLPQSVLDHEFQSLFQMGY 407
+P PG+ QG + + ANP P Q L F QM Y
Sbjct: 256 PKPSQPGMLQGDVHGM--ANPDTLRALMQSFSQEPASQMHLGRPFHGAVQMAY 306
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 120/182 (65%), Gaps = 21/182 (11%)
Query: 178 ATNGKTRKRAPESNSLLN-------TDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNT 230
+T G+ R+ P + + ++KN E E K S+ +KE D+ K EQ T
Sbjct: 132 STGGRKRRTLPNDKARFHDSTFTSPSEKNTENE-SKSKRPKSAEAMKENDDSKSDAEQRT 190
Query: 231 GANM------RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISER 284
+ +Q+AKP E PK+YIH+RA+RGQAT+ HSLAERVRREKI ER
Sbjct: 191 HTGRPEVNPRQSEQSAKPP-------EPPKDYIHVRARRGQATDRHSLAERVRREKIGER 243
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
M+LLQ+LVPGCNKITGKAVM+DEIINYVQSLQ QVEFLSMKL VNP+L ++E L++D
Sbjct: 244 MKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVEFLSMKLEAVNPKLACNMEGFLARD 303
Query: 345 IL 346
+L
Sbjct: 304 ML 305
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 113/149 (75%), Gaps = 9/149 (6%)
Query: 204 LQKDPSG------DSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI 257
LQ+D SG + S E++ K K Q+ N GK+ K + SS E PK+YI
Sbjct: 220 LQEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDS--SSKPPEPPKDYI 277
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H+RA+RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+
Sbjct: 278 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 337
Query: 318 QVEFLSMKLATVNPELNL-DIERILSKDI 345
QVEFLSMKLATVNP+L+ ++ +L+KD+
Sbjct: 338 QVEFLSMKLATVNPQLDFNNLPNLLAKDM 366
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 113/151 (74%), Gaps = 12/151 (7%)
Query: 208 PSGDSSGILKEQDEKKQK------------IEQNTGANMRGKQAAKPTKDSSLSGEAPKE 255
P+G+SSG L + + K K IE+ ++ + + ++ D + S + K+
Sbjct: 189 PAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKD 248
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSL
Sbjct: 249 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 308
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKDIL 346
Q+QVEFLSMKL++VN L+ +++ +LSKDI
Sbjct: 309 QRQVEFLSMKLSSVNTRLDFNMDALLSKDIF 339
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 113/151 (74%), Gaps = 12/151 (7%)
Query: 208 PSGDSSGILKEQDEKKQK------------IEQNTGANMRGKQAAKPTKDSSLSGEAPKE 255
P+G+SSG L + + K K IE+ ++ + + ++ D + S + K+
Sbjct: 195 PAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKD 254
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSL
Sbjct: 255 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 314
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKDIL 346
Q+QVEFLSMKL++VN L+ +++ +LSKDI
Sbjct: 315 QRQVEFLSMKLSSVNTRLDFNMDALLSKDIF 345
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 113/151 (74%), Gaps = 12/151 (7%)
Query: 208 PSGDSSGILKEQDEKKQK------------IEQNTGANMRGKQAAKPTKDSSLSGEAPKE 255
P+G+SSG L + + K K IE+ ++ + + ++ D + S + K+
Sbjct: 195 PAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKD 254
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSL
Sbjct: 255 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 314
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKDIL 346
Q+QVEFLSMKL++VN L+ +++ +LSKDI
Sbjct: 315 QRQVEFLSMKLSSVNTRLDFNMDALLSKDIF 345
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 120/168 (71%), Gaps = 13/168 (7%)
Query: 179 TNGKTRKRAPESN-SLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGK 237
+N RKR+ E ++ TD++ Q PS DSS KE+ E K ++ T R K
Sbjct: 105 SNSNKRKRSNEDVLGMIGTDQD-----QGMPSVDSS---KERGEDDAKGKEETPPATRKK 156
Query: 238 QAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
+ K +S + + YIH+RA++GQATN HSLAER+RREKISERM+LLQ+LVPGC K
Sbjct: 157 KG----KGASAADGESESYIHVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTK 212
Query: 298 ITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
+TGKAVMLDEIINYVQSLQ+QVEFLSMKLA VNP+L L+I+++LSKD
Sbjct: 213 VTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPQLGLNIKQLLSKDF 260
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 135/233 (57%), Gaps = 23/233 (9%)
Query: 185 KRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTK 244
K +P S+SL ++ V E G G +QDE + +G K
Sbjct: 129 KESPASSSLTASNSKVSGE----NGGSKGGKRSKQDEAGSSKNGVEKCDSKGD-----NK 179
Query: 245 DSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVM 304
D + EAPK+YIH+RA+RGQAT+SHSLAER RREKISERM LLQ+LVPGCN+ITGKAVM
Sbjct: 180 DDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVM 239
Query: 305 LDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNS 364
LDEIINYVQSLQ+QVEFLSMKLATVNP + + LS +++ G + T + S
Sbjct: 240 LDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANAALSTEMIQP--GESLTQSLYAMACS 297
Query: 365 SRPYPPGIFQ--GTMPSIPGANPQFPP--------LPQSVLDHEFQSLFQMGY 407
+ P + MP ++ QFP P +++ QS+ QMG+
Sbjct: 298 EQRLPSAYYSLGKNMPRF--SDTQFPSNDGFVQAETPGFWENNDLQSIVQMGF 348
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 147/266 (55%), Gaps = 32/266 (12%)
Query: 96 NLDQYSSDPSFVELVPKIPGFGSGNFSE-----MVSSFGLPENAQIASSGCPPNYVPNKE 150
+LDQ+ +DP F ++ GF + FGLP+ I +
Sbjct: 90 HLDQFLADPGFAARAARLSGFDGRPGGSGYGGAVPGQFGLPDAGPIGGA---------LR 140
Query: 151 GCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSG 210
N R+ S + E A+ ++G +KR +++
Sbjct: 141 ELELGNGRDESSVSDPASASAEMALKAPSDGNAKKRKASGKGKGKDGPGSTAATKEE--- 197
Query: 211 DSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKD----------SSLSGEAPKEYIHMR 260
SSG + E+ E+N+G +GK AA+ D +S E PK+YIH+R
Sbjct: 198 -SSGKRCKSAEESNGAEENSG---KGKAAAQSNSDNGGKKQGKDGASKPPEPPKDYIHVR 253
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+QVE
Sbjct: 254 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 313
Query: 321 FLSMKLATVNPELNL-DIERILSKDI 345
FLSMKLATVNP+L+ ++ +L KD+
Sbjct: 314 FLSMKLATVNPQLDFNNLPNLLPKDM 339
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/120 (68%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 245 DSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 303
D+S E K +YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGKA
Sbjct: 130 DTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 189
Query: 304 MLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMN 363
MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +I+ L+K++ A + + TIG SS M
Sbjct: 190 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGMSSEMT 249
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 122/175 (69%), Gaps = 20/175 (11%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
SG+ S L Q+E + ++ G++A D+ S E EY+H+RAKRGQATN
Sbjct: 585 SGEGSSSLHSQEETGEMPQRELSMEHAGEKAG----DADASRE---EYVHVRAKRGQATN 637
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
SHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQSLQ+QVEFLSMKL+T
Sbjct: 638 SHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLST 697
Query: 329 VNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRP----------YPPGIF 373
++PELN D++ +DIL ++ +A +G S ++++ P PPG++
Sbjct: 698 ISPELNSDLDL---QDILCSQDARSAFLGCSPQLSNAHPNLYRAAQQCLSPPGLY 749
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 122/175 (69%), Gaps = 20/175 (11%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
SG+ S L Q+E + ++ G++A D+ S E EY+H+RAKRGQATN
Sbjct: 585 SGEGSSSLHSQEETGEMPQRELSMEHAGEKAG----DADASRE---EYVHVRAKRGQATN 637
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
SHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQSLQ+QVEFLSMKL+T
Sbjct: 638 SHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLST 697
Query: 329 VNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRP----------YPPGIF 373
++PELN D++ +DIL ++ +A +G S ++++ P PPG++
Sbjct: 698 ISPELNSDLDL---QDILCSQDARSAFLGCSPQLSNAHPNLYRAAQQCLSPPGLY 749
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 146/266 (54%), Gaps = 32/266 (12%)
Query: 96 NLDQYSSDPSFVELVPKIPGFGSGNFSE-----MVSSFGLPENAQIASSGCPPNYVPNKE 150
+LDQ+ +DP F ++ GF + FGLP+ I +
Sbjct: 90 HLDQFLADPGFAARAARLSGFDGRPGGSGYGGAVPGQFGLPDAGPIGGA---------LR 140
Query: 151 GCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSG 210
N R+ S + E A+ ++G +KR +++
Sbjct: 141 ELELGNGRDESSVSDPASASAEMALKAPSDGNAKKRKASGKGKGKDGPGSTAATKEE--- 197
Query: 211 DSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKD----------SSLSGEAPKEYIHMR 260
SSG + E+ E+N+G +GK AA+ D +S E PK+YIH R
Sbjct: 198 -SSGKRCKSAEESNGAEENSG---KGKAAAQSNSDNGGKKQGKDGASKPPEPPKDYIHFR 253
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+QVE
Sbjct: 254 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 313
Query: 321 FLSMKLATVNPELNL-DIERILSKDI 345
FLSMKLATVNP+L+ ++ +L KD+
Sbjct: 314 FLSMKLATVNPQLDFNNLPNLLPKDM 339
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 121/186 (65%), Gaps = 3/186 (1%)
Query: 183 TRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKP 242
T+KR P+++ ++ N + + K + + EQ K N R +A+
Sbjct: 132 TKKRKPQNSKVVAASDNKQDKRVKASGEEGESKVTEQTSNKNGKSNANKNNNRETTSAET 191
Query: 243 TKDSSLSGEAPK---EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 299
+KD+S E EYIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+
Sbjct: 192 SKDNSKGSEVQNQKPEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVA 251
Query: 300 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFS 359
GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +++ + +K++ + + S IG
Sbjct: 252 GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNLDELFTKEVFPSCAQSFPNIGMP 311
Query: 360 SGMNSS 365
M+ S
Sbjct: 312 LDMSMS 317
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 122/175 (69%), Gaps = 20/175 (11%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
SG+ S L Q+E + ++ G++A D+ S E EY+H+RAKRGQATN
Sbjct: 585 SGEGSSSLHSQEETGEMPQRELSMEHAGEKAG----DADASRE---EYVHVRAKRGQATN 637
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
SHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQSLQ+QVEFLSMKL+T
Sbjct: 638 SHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLST 697
Query: 329 VNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRP----------YPPGIF 373
++PELN D++ +DIL ++ +A +G S ++++ P PPG++
Sbjct: 698 ISPELNSDLDL---QDILCSQDARSAFLGCSPQLSNAHPNLYRAAQQCLSPPGLY 749
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 175/328 (53%), Gaps = 52/328 (15%)
Query: 95 SNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYE 154
S L Q+ SDP FVE K F N S EN +S PP ++G E
Sbjct: 160 SALVQFPSDPGFVEQAAKFSPFN--NIDRNSS-----ENVVCGASNLPPIVGGVQQGGGE 212
Query: 155 RNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSG 214
N+S E + ++ NGK R RA S N+ + E + ++ G+SS
Sbjct: 213 ----NMSVFSEPTKCVDDG------NGKKR-RAKSLTSAENSKEPEEAKAKRCRLGESSE 261
Query: 215 ILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAE 274
I E + + +GK+ K+S++S + YIH+RA+RGQAT+SHSLAE
Sbjct: 262 IDD----DDNNDETSDSNSKKGKE-----KNSNVS-QKDDNYIHVRARRGQATDSHSLAE 311
Query: 275 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN 334
RVRREKI++RM+ LQ+LVP CNK+TGKAVMLDEIINYVQSLQ QVEFLSMKLATVNP+L+
Sbjct: 312 RVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPKLD 371
Query: 335 LDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSV 394
+I+ +K++ SGS + S GM+ + + + Q ++ ++P P SV
Sbjct: 372 FNIDNFFAKEM----SGSFS----SKGMSPTYFHLDQLKQASLQTVPSPGSDIPSTMSSV 423
Query: 395 ----------------LDHEFQSLFQMG 406
D E Q+++ MG
Sbjct: 424 DSAEMFDGTNFQRQEGWDSELQNMYNMG 451
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 99/122 (81%), Gaps = 1/122 (0%)
Query: 243 TKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
+ D+S E K +YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGK
Sbjct: 239 SADTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 298
Query: 302 AVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSG 361
A MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +I+ L+K++ A + + TIG SS
Sbjct: 299 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGMSSE 358
Query: 362 MN 363
M
Sbjct: 359 MT 360
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 158/284 (55%), Gaps = 35/284 (12%)
Query: 79 APSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSE-----MVSSFGLPEN 133
APS LEN + ++LDQ+ +DP F E ++ GF + FGLP+
Sbjct: 102 APSGLPILEN--LMPMAHLDQFLADPGFAERAARLSGFDGRPGGSGYGGAVPGQFGLPDA 159
Query: 134 AQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSL 193
I + KE N R+ S + E A+ ++G +KR
Sbjct: 160 DPIDAL---------KE-LELGNGRDESSVSDPASASAEMALKGPSDGNAKKRKASGKGK 209
Query: 194 LNTD--KNVEVELQKDPSG--------DSSGILKEQDEKKQKIEQNTGANMRGKQAAKPT 243
+L K+ SG +S+G E + K K Q+ N KQ
Sbjct: 210 GKDGPGSTAAKDLAKEESGGKRCKSADESNG--AEDNSTKGKAAQSNSENGGKKQG---- 263
Query: 244 KDS-SLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
KDS S E PK+YIH+RA+RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKA
Sbjct: 264 KDSTSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKA 323
Query: 303 VMLDEIINYVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDI 345
VMLDEIINYVQSLQ+QVEFLSMKLATVNP+L+ ++ +L KDI
Sbjct: 324 VMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLPKDI 367
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 137/222 (61%), Gaps = 28/222 (12%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
SG+ S L Q+E + ++ G++A D+ S E EY+H+RAKRGQATN
Sbjct: 82 SGEGSSSLHSQEETGEMPQRELSMEHAGEKAG----DADASRE---EYVHVRAKRGQATN 134
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
SHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQSLQ+QVEFLSMKL+T
Sbjct: 135 SHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLST 194
Query: 329 VNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRP----------YPPGIFQGTMP 378
++PELN D++ +DIL ++ +A +G S ++++ P PPG++
Sbjct: 195 ISPELNSDLDL---QDILCSQDARSAFLGCSPQLSNAHPNLYRAAQQCLSPPGLYGSVCV 251
Query: 379 SIP--------GANPQFPPLPQSVLDHEFQSLFQMGYDSTSA 412
P G FP + + E +++ G+ S +A
Sbjct: 252 PNPADVHLARAGHLASFPQQRGLIWNEELRNIAPAGFASDAA 293
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 117/172 (68%), Gaps = 31/172 (18%)
Query: 177 VATNGKTRKRAPESNSL---LNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGAN 233
V T + RAPE+ + L+TD + E QK +G++ D N
Sbjct: 180 VVTPAAPKSRAPETRAKKCKLSTDVGHDDEEQKPAAGEA-----WHD------------N 222
Query: 234 MRGKQ-AAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELV 292
GK+ AA+P+KD YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LV
Sbjct: 223 SNGKEVAAEPSKD----------YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLV 272
Query: 293 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
PGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKL+TVNP L LD++ + KD
Sbjct: 273 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLKLDVDSCIPKD 324
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 138/233 (59%), Gaps = 23/233 (9%)
Query: 185 KRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTK 244
K +P S+SL ++ V SG++ G K KQ + ++ + + K
Sbjct: 126 KESPASSSLTASNSKV--------SGENGGS-KGGKRSKQDVAGSSKNGVEKCDSKGDNK 176
Query: 245 DSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVM 304
D + EAPK+YIH+RA+RGQAT+SHSLAER RREKISERM LLQ+LVPGCN+ITGKAVM
Sbjct: 177 DDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVM 236
Query: 305 LDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNS 364
LDEIINYVQSLQ+QVEFLSMKLATVNP + + LS +++ G + T + S
Sbjct: 237 LDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQP--GESLTQSLYAMACS 294
Query: 365 SRPYPPGIFQ--GTMPSIPGANPQFPP--------LPQSVLDHEFQSLFQMGY 407
+ P + MP ++ QFP P +++ QS+ QMG+
Sbjct: 295 EQRLPSAYYSLGKNMPRF--SDTQFPSNDGFVHTETPGFWENNDLQSIVQMGF 345
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 178/342 (52%), Gaps = 55/342 (16%)
Query: 103 DPSFVELVPKIPGFGSGNFS--EMVSSFGLPE------NAQIASSGCPPNYVPNKEGCYE 154
DP F E + FGS +F+ ++ + FG N +++ P+
Sbjct: 101 DPGFAERAARFSCFGSRSFNGRQLTNEFGNYRSHLSIGNEKLSRVSSSPSLKALGSEMNL 160
Query: 155 RNSRNVSQSYEDHQICEEAAIGVATNGKTRK---RAPESNSLLNTDKNVEVELQKDPSGD 211
+ +N S S ED + TN + RK +A LL K+ EVE
Sbjct: 161 QEHKNNSSSQEDESSLSNQDKTI-TNPRKRKAITKAKLKEPLLPKRKSEEVE-------- 211
Query: 212 SSGILKEQDEKKQKIEQNTGANMRGKQAA--KPTKDSSLSGEAPKEYIHMRAKRGQATNS 269
SG KK K E G + +A K TK +S EAPK+YIH+RA+RGQAT+S
Sbjct: 212 DSG-------KKGKRENGRGFEENDENSAEEKQTKANSKPPEAPKDYIHVRARRGQATDS 264
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 329
HSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSLQ QVEFLSMKLA+V
Sbjct: 265 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASV 324
Query: 330 N-PELNLDIERILSKDILHARSGSAAT-----------IGFSSGMNSSRPYPPGIFQGTM 377
N ++ +++ ++S ++ +SG++ T F NSS P +
Sbjct: 325 NTTRVDFNVDSLISSKQMY-QSGTSLTHPQISPIDSSASSFYGHQNSSLPTTSHCSVDPI 383
Query: 378 PSIPGAN--PQFPPLPQSVL----------DHEFQSLFQMGY 407
S+ N Q PPL S L + E QS+ QMG+
Sbjct: 384 DSVLCQNLPIQLPPL-NSFLQNPSQYPNFGEDELQSIVQMGF 424
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 122/202 (60%), Gaps = 27/202 (13%)
Query: 237 KQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
K+ T +S S E P +YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCN
Sbjct: 165 KETCAETSNSKAS-EKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 222
Query: 297 KITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI 356
K+TGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+L I+ + KD+ + + I
Sbjct: 223 KVTGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDLSIDDLFDKDVFSTCATNFPNI 282
Query: 357 GFSSGMNSSRPY------PPGIF--QGTMPSIPG-----ANPQFPP------------LP 391
G SS + S P P IF G PS G + P P LP
Sbjct: 283 GISSTSDISNPAYLQFNSPQQIFSYDGLDPSDMGLRRTISAPVSMPETYLQSSCFTQMLP 342
Query: 392 QSVLDHEFQSLFQMGYDSTSAV 413
S + +FQ+L +D A
Sbjct: 343 SSTWEGDFQNLCNFDFDQARAT 364
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 171/309 (55%), Gaps = 57/309 (18%)
Query: 95 SNLDQYSSDPSFVELVPKIPGFGSGNFSE----MV--------SSFGLPEN----AQIAS 138
S + ++S DP FV+ K FGS +F+E MV S L EN ++++S
Sbjct: 91 SRVAEFSPDPGFVQRAAKFSCFGSKSFNERGNQMVMNNVELAQRSHNLMENGMKLSRVSS 150
Query: 139 SGCPPNYVPNKEGCYERNSR--------NVSQSYEDHQICEE----AAIGVAT----NGK 182
S + +NS V+ S E+ +I E+ IGV N +
Sbjct: 151 SPSLKTFGSQMVNHENKNSSLQQENEKMEVANSQEESKISEQNTPNGEIGVKASPDMNSR 210
Query: 183 TRK------RAPESNSLLNTDKNVE--------VELQKDPSGDSSGILKEQDEKKQKIEQ 228
RK +AP S N K VE +++ + + ++ +E+ ++
Sbjct: 211 KRKASSSKGKAPNS---TNPTKGVEGSGEDFNAKKIKANEGERNENGVRNMEEEIKEGTP 267
Query: 229 NTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLL 288
N G + K +KP E K+YIH+RA+RGQAT+SHSLAERVRREKISERM+LL
Sbjct: 268 NAGEEKQNKSDSKPP-------EPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLL 320
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIER-ILSKDILH 347
Q+LVPGCNK+TGKA+MLDEIINYVQSLQ+QVEFLSMKL++VN +++L IE ++SKDI
Sbjct: 321 QDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTKMDLSIESLVVSKDIFQ 380
Query: 348 ARSGSAATI 356
+ + +I
Sbjct: 381 SNNSLQNSI 389
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 108/138 (78%), Gaps = 3/138 (2%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
S + S E++ K K Q+ N GK+ K + SS E PK+YIH+RA+RG+AT+
Sbjct: 26 STEESNAAAEENSGKGKAAQSNSENGGGKKQGKDS--SSKPPEPPKDYIHVRARRGEATD 83
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+QVEFLSMKLAT
Sbjct: 84 SHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLAT 143
Query: 329 VNPELNL-DIERILSKDI 345
VNP+L+ ++ +L+KD+
Sbjct: 144 VNPQLDFNNLPNLLAKDM 161
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Query: 211 DSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSH 270
+SSG K K Q++ N G++ + EAPK+YIH+RA+RG+AT+SH
Sbjct: 232 ESSGAEDNNPTTKGKAAQSSSENGGGRKQQGKESATKPPAEAPKDYIHVRARRGEATDSH 291
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
SLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+QVEFLSMKLATVN
Sbjct: 292 SLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 351
Query: 331 PELNLDI--ERILSKDI 345
P+L+ + +L KDI
Sbjct: 352 PQLDFNSLPNLLLPKDI 368
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 92/105 (87%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
K K+++ E PK+YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TG
Sbjct: 40 KSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 99
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
KAVMLDEIINYVQSLQ+QVEFLSMKLA VNP L ++E +L K++
Sbjct: 100 KAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVESLLGKEV 144
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 147/257 (57%), Gaps = 42/257 (16%)
Query: 93 STSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS-FGLPENAQIASSGCPPNYVPNKEG 151
+T + ++S DP F E + FGS +F+ +S F + +A++ P
Sbjct: 128 TTMPITEFSGDPGFAERAARFSCFGSRSFNGRTNSPFPINNEQPVATNEKMP-------- 179
Query: 152 CYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPES--NSLLNTDKNVEVELQKDPS 209
+S S + G ++ +RKR +S NS + E+E ++D
Sbjct: 180 -------RISSSPVLKPLVSHVPAGESSGEYSRKRKAKSKQNSPSTVSPSKEIEEKED-- 230
Query: 210 GDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNS 269
D K+ K ++ G D + S + K+YIH+RA+RGQAT+S
Sbjct: 231 ---------SDPKRCKKSEDNG-------------DKTKSIDPYKDYIHVRARRGQATDS 268
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 329
HSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSLQ+QVEFLSMKL++V
Sbjct: 269 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSV 328
Query: 330 NPELNLDIERILSKDIL 346
N L+ +++ +LSKDI
Sbjct: 329 NTRLDFNMDALLSKDIF 345
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/97 (77%), Positives = 88/97 (90%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E K+YIH+RA+RGQAT+SHSLAERVRRE+ISERM+LLQ LVPGCNKITGKA+MLDEIIN
Sbjct: 73 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 132
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILH 347
YVQSLQ+QVEFLSMKLAT+NP+L+ D + SKD+ H
Sbjct: 133 YVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSH 169
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/97 (77%), Positives = 88/97 (90%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E K+YIH+RA+RGQAT+SHSLAERVRRE+ISERM+LLQ LVPGCNKITGKA+MLDEIIN
Sbjct: 103 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 162
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILH 347
YVQSLQ+QVEFLSMKLAT+NP+L+ D + SKD+ H
Sbjct: 163 YVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSH 199
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 109/137 (79%), Gaps = 13/137 (9%)
Query: 249 SGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
+GEA KE Y H+RA++GQATN+HSLAER+RREKISERM+LLQ+LVPGC+K+TGKA+MLDE
Sbjct: 165 AGEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDE 224
Query: 308 IINYVQSLQQQVEFLSMKLATVNPELNLDIERIL--SKDILHARSG-SAATIGFS----- 359
IINYVQSLQ+QVEFLSMKL+ VNP ++LDIE ++ SKD+L S+A +GFS
Sbjct: 225 IINYVQSLQRQVEFLSMKLSAVNPRIDLDIESLVNNSKDVLRFPGQPSSAPMGFSFSTEM 284
Query: 360 -SGMNSSRPYPPGIFQG 375
G+ SR PGI QG
Sbjct: 285 MPGLQLSR---PGILQG 298
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 130/221 (58%), Gaps = 33/221 (14%)
Query: 237 KQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
KQ K SS+S ++YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCN
Sbjct: 102 KQTVDNAKPSSVS--VKQDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 159
Query: 297 KITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE-RILSKDILHARSGSAA- 354
K+TGKAVMLDEIINYVQ+LQ QVEFLSMKLA VNP+L+ ++E L++D+L S +
Sbjct: 160 KVTGKAVMLDEIINYVQALQCQVEFLSMKLAAVNPQLDCNVEGGYLTRDVLQPHCSSISK 219
Query: 355 -----TIGFSSGMNSSRPYP----------------PGIFQGTMPSIPG-ANPQFPPLPQ 392
T +S +N + P G+ + G A+P F
Sbjct: 220 MFAPDTTAAASQINQLQKTPLQHGLQCRADRQELAIRGMMDTQFTCMNGYADPTFQLQMS 279
Query: 393 SVLDHEFQSLFQMGYDSTSA--VDSLG-----PNGRLKSEL 426
D EFQ+ +G D + + S G P G +K EL
Sbjct: 280 QGWDDEFQNAVDIGLDQNRSNPLKSHGFHGVLPTGHMKVEL 320
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 244 KDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 303
K+ ++ + K+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVP CNK+TGKAV
Sbjct: 17 KEKEVAEDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAV 76
Query: 304 MLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMN 363
MLDEIINYVQSLQ+QVEFLSMKL+TVNP++ D++ L KD S A + G N
Sbjct: 77 MLDEIINYVQSLQRQVEFLSMKLSTVNPQMEFDVDNFLPKDDNEPCSLPATAYTAAEGAN 136
Query: 364 -SSRPYPP 370
++ YPP
Sbjct: 137 PAAFCYPP 144
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
Query: 243 TKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
+KD+S E K +YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGK
Sbjct: 220 SKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 279
Query: 302 AVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSG 361
A MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ + + + +++ A S + TIG SS
Sbjct: 280 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNFDNLFAREAFPACSVNFPTIGMSSD 339
Query: 362 M 362
M
Sbjct: 340 M 340
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 106/150 (70%), Gaps = 24/150 (16%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
S D++G ++D K + G N +GK +GE PK+YIH+RA+RGQAT+
Sbjct: 105 SADAAG---DEDTKPVAGDAGHGGNGKGKVL-------DAAGEPPKDYIHVRARRGQATD 154
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNK--------------ITGKAVMLDEIINYVQS 314
SHSLAERVRREKISERM+LLQ+LVPGCNK +TGKAVMLDEIINYVQS
Sbjct: 155 SHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQS 214
Query: 315 LQQQVEFLSMKLATVNPELNLDIERILSKD 344
LQ+QVEFLSMKL+TVNP+L+ D++ + KD
Sbjct: 215 LQRQVEFLSMKLSTVNPQLDFDVDNFIPKD 244
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 88/96 (91%), Gaps = 1/96 (1%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+Y+H+RA+RGQAT+SHSLAERVRREKIS+RM+ LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 311 YVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDI 345
YVQSLQQQVEFLSMKLATVNPEL+ ++ +L KD+
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDV 243
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 88/96 (91%), Gaps = 1/96 (1%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+Y+H+RA+RGQAT+SHSLAERVRREKIS+RM+ LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 150 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 209
Query: 311 YVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDI 345
YVQSLQQQVEFLSMKLATVNPEL+ ++ +L KD+
Sbjct: 210 YVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDV 245
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 99/124 (79%), Gaps = 1/124 (0%)
Query: 240 AKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
A+ +KD+S E K +YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKI
Sbjct: 214 AETSKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 273
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
TGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +I+ +++K+ + IG
Sbjct: 274 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFPPCPTNFPAIGL 333
Query: 359 SSGM 362
SS M
Sbjct: 334 SSDM 337
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 104/150 (69%), Gaps = 20/150 (13%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+Y+H+RA+RGQAT+SHSLAERVRREKIS+RM+ LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 311 YVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDILHARSGSAATIGFSSGMNSSRPYP 369
YVQSLQQQVEFLSMKLATVNPEL+ ++ +L KD+ G G ++S +P
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDMYQQPCG---------GPSASSVFP 258
Query: 370 PGIFQGTMPSIPGANPQFPPLPQSVLDHEF 399
+ A FP Q+ L H F
Sbjct: 259 ----------LESAGAAFPFCEQADLFHSF 278
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 104/150 (69%), Gaps = 20/150 (13%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+Y+H+RA+RGQAT+SHSLAERVRREKIS+RM+ LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 311 YVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDILHARSGSAATIGFSSGMNSSRPYP 369
YVQSLQQQVEFLSMKLATVNPEL+ ++ +L KD+ G G ++S +P
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDMYQQPCG---------GPSASSVFP 258
Query: 370 PGIFQGTMPSIPGANPQFPPLPQSVLDHEF 399
+ A FP Q+ L H F
Sbjct: 259 ----------LESAGAAFPFCEQADLFHSF 278
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
Query: 235 RGKQAAKPTKDSS---LSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQEL 291
RG++ AK S + E P++Y+H+RA+RGQAT+SHSLAERVRREKI+ +M++LQ+L
Sbjct: 41 RGRKQAKGKVSKSKQPAADEPPRDYVHVRARRGQATDSHSLAERVRREKITLKMKMLQDL 100
Query: 292 VPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD-IERILSKDILHARS 350
VPGCNK+ GKA+MLDEIINYVQSLQQQVEFLSMKL+TVNP+L+ D + +L KD+ A
Sbjct: 101 VPGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLSTVNPQLDFDTLSNLLHKDMNQALG 160
Query: 351 GSAATI 356
SA+T+
Sbjct: 161 PSASTV 166
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 167/317 (52%), Gaps = 47/317 (14%)
Query: 86 LENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNY 145
L+ G LD++ DP F ++ F F+ FGLP AS G
Sbjct: 22 LDFGGEEEEDCLDRFCGDPGFAARAARLSSFSGQRFAVTAGLFGLPPPLSAASGG----- 76
Query: 146 VPNKEGCYERNSRNVSQ---SYEDHQICEEAAIGVATNGKTRK----------RAPESNS 192
E R + +VS + +D + A A GK R+ + P++
Sbjct: 77 --GGEFAGSREASSVSDPASAMKDANAKKRKAPAAAAKGKGREPSAQAQAGEPKGPDAKR 134
Query: 193 LLNTD--KNVE---VELQK-DPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDS 246
+ + VE V+L K + +G S + + QK G N AKP
Sbjct: 135 CCKAEGGEGVEGSPVKLPKPEQAGSDSSVEDGGGAQNQKPPPGKGKN------AKPV--- 185
Query: 247 SLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLD 306
E P++Y+H+RA+RGQAT+SHSLAERVRRE+IS+RM++LQ+LVPGCNK+ GKA+MLD
Sbjct: 186 ----EPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLD 241
Query: 307 EIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSR 366
EIINYVQSLQ+QVEFLSMKLATVNP ++ +L KD+ A SA+++ FS + S
Sbjct: 242 EIINYVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDMFQACGASASSV-FS--LESCS 298
Query: 367 P-YPPG----IFQGTMP 378
P +P G +FQ P
Sbjct: 299 PGFPFGGQGDVFQSFAP 315
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 101/129 (78%), Gaps = 9/129 (6%)
Query: 232 ANMRGK-QAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQE 290
A +GK + AKP E PK+Y+H+RA+RGQAT+SHSLAERVRREKIS+RM+ LQ+
Sbjct: 135 AQKKGKGKTAKPAV------EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQD 188
Query: 291 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDILHAR 349
LVPGCNK+ GKA+MLDEIINYVQSLQQQVEFLSMKLATVNP+L+ ++ +L KD +H
Sbjct: 189 LVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKD-MHQP 247
Query: 350 SGSAATIGF 358
G +A F
Sbjct: 248 CGPSANSVF 256
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 97/118 (82%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+Y+H+RA+RGQAT+SHSLAERVRRE+IS+RM++LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY 368
YVQSLQ+QVEFLSMKLATVNP ++ +L KD+ A SA+++ NS+ P+
Sbjct: 256 YVQSLQRQVEFLSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSNSAFPF 313
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/127 (62%), Positives = 101/127 (79%), Gaps = 8/127 (6%)
Query: 232 ANMRGK-QAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQE 290
A +GK + AKP + E PK+Y+H+RA+RGQAT+SHSLAERVRREKIS+RM+ LQ+
Sbjct: 135 AQKKGKGKTAKP------AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQD 188
Query: 291 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDILHAR 349
LVPGCNK+ GKA+MLDEIINYVQSLQQQVEFLSMKLATVNP+L+ ++ +L KD+
Sbjct: 189 LVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMYQPC 248
Query: 350 SGSAATI 356
SA ++
Sbjct: 249 GPSANSV 255
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 113/171 (66%), Gaps = 28/171 (16%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
K+YIH+RA+RGQAT+SHSLAERVRR++ISERM+LLQ LVPGCNKITGKA+MLDEIINYVQ
Sbjct: 242 KDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQ 301
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDI------LHARSGSAATIGFSS------G 361
SLQ+QVEFLSMKL+T+NP+L+LD + SKD+ +A A ++S
Sbjct: 302 SLQRQVEFLSMKLSTMNPQLDLDGQYKPSKDMNQVTMPAYASDEPAGAFSYASSPADSFA 361
Query: 362 MNSSRPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEFQSLFQMGYDSTSA 412
M S+ + QGT +H+ QS+ QMG S+S+
Sbjct: 362 MGSAVAHHGLELQGTF----------------SWEHDLQSMVQMGGASSSS 396
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/127 (62%), Positives = 100/127 (78%), Gaps = 8/127 (6%)
Query: 232 ANMRGK-QAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQE 290
A +GK + AKP E PK+Y+H+RA+RGQAT+SHSLAERVRREKIS+RM+ LQ+
Sbjct: 135 AQKKGKGKTAKPAV------EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQD 188
Query: 291 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDILHAR 349
LVPGCNK+ GKA+MLDEIINYVQSLQQQVEFLSMKLATVNP+L+ ++ +L KD+
Sbjct: 189 LVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMYQPC 248
Query: 350 SGSAATI 356
SA ++
Sbjct: 249 GPSANSV 255
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/127 (62%), Positives = 100/127 (78%), Gaps = 8/127 (6%)
Query: 232 ANMRGK-QAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQE 290
A +GK + AKP E PK+Y+H+RA+RGQAT+SHSLAERVRREKIS+RM+ LQ+
Sbjct: 135 AQKKGKGKTAKPAV------EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQD 188
Query: 291 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDILHAR 349
LVPGCNK+ GKA+MLDEIINYVQSLQQQVEFLSMKLATVNP+L+ ++ +L KD+
Sbjct: 189 LVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMYQPC 248
Query: 350 SGSAATI 356
SA ++
Sbjct: 249 GPSANSV 255
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 117/179 (65%), Gaps = 14/179 (7%)
Query: 249 SGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
+G ++Y+H+RAKRGQATNSHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEI
Sbjct: 113 AGAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 172
Query: 309 INYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF-----SSGMN 363
INYVQSLQ+QVEFLSMKL+ ++PELN D++ +DIL + S+A G+ + +N
Sbjct: 173 INYVQSLQRQVEFLSMKLSAISPELNCDLDL---QDILCTQDASSAFPGYNVQANNVHLN 229
Query: 364 SSRPYPPGIFQGTMPSIPGA----NPQFPPLPQS--VLDHEFQSLFQMGYDSTSAVDSL 416
R +P+ N Q PQ + + E +S+ + S + DS+
Sbjct: 230 LYRASEEDFSHRIIPNPANVHVTRNAQLSAFPQRGVIWNEELRSIAPNSFASDTIADSM 288
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 95/114 (83%), Gaps = 6/114 (5%)
Query: 237 KQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
K +KP +D S ++YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC+
Sbjct: 52 KATSKPPQDLS-----KQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCS 106
Query: 297 KITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARS 350
KITGKAVMLDEIINYVQSLQ+Q+EFLSMKLA VNP L+ + +L KD+L +RS
Sbjct: 107 KITGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYSYD-LLGKDMLQSRS 159
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
+K +S + E P +YIH+RA+RGQAT+SHSLAERVRREKISERM LQ+LVPGCNK+TGKA
Sbjct: 179 SKQNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKA 237
Query: 303 VMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSS 360
MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ ++ + KD+ + + IG SS
Sbjct: 238 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFSMDDLFDKDVFPTCAANFPNIGMSS 295
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Query: 239 AAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
+A +K S + + P +YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+L+PGCNK+
Sbjct: 173 SADTSKGSEVQNQKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKV 231
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +I+ + +K++ + + S IG
Sbjct: 232 AGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFPSCAQSFPNIGI 291
Query: 359 SSGMNSS 365
S M+ S
Sbjct: 292 PSDMSIS 298
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 93/106 (87%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+Y+H+RA+RGQAT+SHSLAERVRRE+IS+RM++LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI 356
YVQSLQ+QVEFLSMKLATVNP ++ +L KD+L A SA+++
Sbjct: 256 YVQSLQRQVEFLSMKLATVNPLDFSNLPTLLQKDMLQACGPSASSV 301
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 105/133 (78%), Gaps = 8/133 (6%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E P++Y+H+RA+RGQAT+SHSLAERVRRE+IS+RM++LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 186 EPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 245
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRP-YP 369
YVQSLQ+QVEFLSMKLATVNP ++ +L KD+ A SA+++ FS + S P +P
Sbjct: 246 YVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDMFQACGASASSV-FS--LESCSPGFP 302
Query: 370 PG----IFQGTMP 378
G +FQ +P
Sbjct: 303 FGGQGDVFQSFVP 315
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 90/97 (92%), Gaps = 1/97 (1%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQAT+SHSLAERVRREKI ERM+LLQ+LVPGCNK+TGKA+MLDEIIN
Sbjct: 293 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352
Query: 311 YVQSLQQQVEFLSMKLATVN-PELNLDIERILSKDIL 346
YVQSLQ+QVEFLSMKL++VN L+ +++ ++SKD++
Sbjct: 353 YVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVM 389
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 90/97 (92%), Gaps = 1/97 (1%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQAT+SHSLAERVRREKI ERM+LLQ+LVPGCNK+TGKA+MLDEIIN
Sbjct: 291 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 350
Query: 311 YVQSLQQQVEFLSMKLATVN-PELNLDIERILSKDIL 346
YVQSLQ+QVEFLSMKL++VN L+ +++ ++SKD++
Sbjct: 351 YVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVM 387
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 90/97 (92%), Gaps = 1/97 (1%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQAT+SHSLAERVRREKI ERM+LLQ+LVPGCNK+TGKA+MLDEIIN
Sbjct: 293 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352
Query: 311 YVQSLQQQVEFLSMKLATVN-PELNLDIERILSKDIL 346
YVQSLQ+QVEFLSMKL++VN L+ +++ ++SKD++
Sbjct: 353 YVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVM 389
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 87/97 (89%), Gaps = 1/97 (1%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQ
Sbjct: 68 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 127
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARS 350
SLQ+Q+EFLSMKLA VNP L+ + +L KD+L RS
Sbjct: 128 SLQRQIEFLSMKLAAVNPRLDYGFD-VLGKDLLQLRS 163
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Query: 239 AAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
+A +K++S + E K +YIH+RA+RGQAT+SHSLAER RREKISERM+ LQ+LVPGCNK
Sbjct: 228 SADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNK 287
Query: 298 ITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
ITGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +++ + +K++ S +AA
Sbjct: 288 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPP-SCTAANFP 346
Query: 358 FSSGMNSSRPYPPGIFQ 374
GM+S P Q
Sbjct: 347 SVGGMSSEMTDPSSYLQ 363
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Query: 239 AAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
+A +K S + + P +YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+L+PGCNK+
Sbjct: 173 SADTSKGSEVQNQKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKV 231
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +I+ + +K++ + + S IG
Sbjct: 232 AGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPGLDFNIDELFAKEVFPSCAQSFPNIGI 291
Query: 359 SSGMNSS 365
S M+ S
Sbjct: 292 PSDMSIS 298
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 96/117 (82%), Gaps = 3/117 (2%)
Query: 235 RGKQAAK--PTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELV 292
RG++ AK +K E P++Y+H+RA+RGQAT+SHSLAERVRREKI+ +M++LQ+LV
Sbjct: 151 RGRKQAKGKSSKSKQADDEPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQDLV 210
Query: 293 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD-IERILSKDILHA 348
PGCNK+ GKA+MLDEIINYVQSLQQQVEFLSMKLATVNP+L+ + +L KD+ A
Sbjct: 211 PGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSTLSTLLHKDMNEA 267
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 92/106 (86%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+Y+H+RA+RGQAT+SHSLAERVRRE+IS+RM++LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI 356
YVQSLQ+QVEFLSMKLATVNP ++ +L KD+ A SA+++
Sbjct: 256 YVQSLQRQVEFLSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSV 301
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Query: 239 AAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
+A +K++S + E K +YIH+RA+RGQAT+SHSLAER RREKISERM+ LQ+LVPGCNK
Sbjct: 228 SADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNK 287
Query: 298 ITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
ITGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +++ + +K++ S +AA
Sbjct: 288 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVF-PPSCTAANFP 346
Query: 358 FSSGMNSSRPYPPGIFQ 374
GM+S P Q
Sbjct: 347 SVGGMSSEMTDPSSYLQ 363
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 128/188 (68%), Gaps = 20/188 (10%)
Query: 169 ICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKI-E 227
I E +G G +KR ++ + +K +V + +D +++E +E+K KI E
Sbjct: 80 ISPETTLGT---GNFKKRKFDTETKDCNEKKKKVTMNRDD------LVEEGEEEKSKITE 130
Query: 228 QNTGA--NMRGKQAAKPTKDSSLSGEAPK--------EYIHMRAKRGQATNSHSLAERVR 277
QN G+ +++ + ++++ S ++ K +YIH+RA+RGQAT+SHS+AERVR
Sbjct: 131 QNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVR 190
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM+ LQ+LVPGC+KITGKA MLDEIINYVQSLQ+Q+EFLSMKLA VNP + D+
Sbjct: 191 REKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDM 250
Query: 338 ERILSKDI 345
+ I +K++
Sbjct: 251 DDIFAKEV 258
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 85/92 (92%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
K+YIH+RA+RGQAT+SHSLAERVRREKI ERM+LLQ LVP CNKITGKA+MLDEIINYVQ
Sbjct: 253 KDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQ 312
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
SLQ+QVEFLSMKL+T+NP+L LD + I SK++
Sbjct: 313 SLQRQVEFLSMKLSTMNPQLELDEQCIPSKEM 344
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 117/188 (62%), Gaps = 18/188 (9%)
Query: 184 RKRAPESNSLLNTDKNVEVELQKDPS---GDSSGILKEQDEKKQKIEQNTGANMRGKQAA 240
RKR S L+ D P GD+ ++K + E+ + R +
Sbjct: 368 RKRKSSSADKLDVDSKAADVADSQPKRCKGDNDDLVKAKAERSSSENSGDSGSPRAHKEN 427
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
+KD A ++YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC+K+TG
Sbjct: 428 NSSKD-----HAKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTG 482
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNP-----ELNLDIERILSKDILHAR-----S 350
KAVMLDEIINYVQSLQ+QVE LSMKLA+VNP ++ + E ++KD+L ++
Sbjct: 483 KAVMLDEIINYVQSLQRQVENLSMKLASVNPGPSSTRIDHNFETTMNKDMLQSQMSGSLG 542
Query: 351 GSAATIGF 358
GS +T F
Sbjct: 543 GSESTTTF 550
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 112/153 (73%), Gaps = 11/153 (7%)
Query: 197 DKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSS-LSGEAPK- 254
++ + ++ +++P + G +E+ EKK K+E T ++M+GK + T+ SS S E K
Sbjct: 116 NRAIALKNKRNPEVKTRG--EEKTEKKIKVEAETESSMKGKSNMRNTEASSDTSKETSKK 173
Query: 255 -------EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
+YIH+RA+RGQAT+ HSLAER RREKIS++M+ LQ++VPGCNK+TGKA MLDE
Sbjct: 174 ASEIQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDE 233
Query: 308 IINYVQSLQQQVEFLSMKLATVNPELNLDIERI 340
IINYVQ LQ+QVEFLSMKLA +NPEL L +E +
Sbjct: 234 IINYVQCLQRQVEFLSMKLAVLNPELELAVEDV 266
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 178 ATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKI----EQNTGAN 233
A +G RKR S + V S +++ E KK K+ E+ A
Sbjct: 175 ACDGPCRKRKASGTSSKQSKAKEAVTTAPPESRETA----ETRAKKCKLSTDEERKPAAG 230
Query: 234 MRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVP 293
+ + K + + E PK+YIH+RA+RGQAT+SHSLAERVRREKI ERM+LLQ+LVP
Sbjct: 231 EGWRGSGKGKELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVP 290
Query: 294 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
GC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKL+TVNP L L
Sbjct: 291 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLEL 332
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 128/188 (68%), Gaps = 20/188 (10%)
Query: 169 ICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKI-E 227
I E +G G +KR ++ + +K ++ + +D +++E +E+K KI E
Sbjct: 80 ISPETTLGT---GNFKKRKFDTETKDCNEKKKKMTMNRDD------LVEEGEEEKSKITE 130
Query: 228 QNTGA--NMRGKQAAKPTKDSSLSGEAPK--------EYIHMRAKRGQATNSHSLAERVR 277
QN G+ +++ + ++++ S ++ K +YIH+RA+RGQAT+SHS+AERVR
Sbjct: 131 QNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVR 190
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM+ LQ+LVPGC+KITGKA MLDEIINYVQSLQ+Q+EFLSMKLA VNP + D+
Sbjct: 191 REKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDM 250
Query: 338 ERILSKDI 345
+ I +K++
Sbjct: 251 DDIFAKEV 258
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 127/188 (67%), Gaps = 20/188 (10%)
Query: 169 ICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKI-E 227
I E +G G +KR ++ + +K ++ + +D +++E +E+K KI E
Sbjct: 80 ISPETTLGT---GNFKKRKFDTETKDCNEKKKKMTMNRD------DLVEEGEEEKSKITE 130
Query: 228 QNTGAN--MRGKQAAKPTKDSSLSGEAPK--------EYIHMRAKRGQATNSHSLAERVR 277
QN G+ ++ + ++++ S ++ K +YIH+RA+RGQAT+SHS+AERVR
Sbjct: 131 QNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVR 190
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM+ LQ+LVPGC+KITGKA MLDEIINYVQSLQ+Q+EFLSMKLA VNP + D+
Sbjct: 191 REKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDM 250
Query: 338 ERILSKDI 345
+ I +K++
Sbjct: 251 DDIFAKEV 258
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 115/154 (74%), Gaps = 11/154 (7%)
Query: 203 ELQKDPSGDSSGILKEQDEKKQKI-EQNTGA--NMRGKQAAKPTKDSSLSGEAPK----- 254
E +K + + +++E +E+K KI EQN G+ +++ + ++++ S ++ K
Sbjct: 105 EKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKEL 164
Query: 255 ---EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
+YIH+RA+RGQAT+SHS+AERVRREKISERM+ LQ+LVPGC+KITGKA MLDEIINY
Sbjct: 165 EKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINY 224
Query: 312 VQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
VQSLQ+Q+EFLSMKLA VNP + D++ I +K++
Sbjct: 225 VQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 82/91 (90%), Gaps = 3/91 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
EAP YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ LVPGC+K+TGKAVMLDEIIN
Sbjct: 127 EAPVGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIIN 186
Query: 311 YVQSLQQQVEFLSMKLATVNP---ELNLDIE 338
YVQSLQ QVEFLSMKLATV+P E LDIE
Sbjct: 187 YVQSLQNQVEFLSMKLATVSPMLYEFGLDIE 217
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 115/163 (70%), Gaps = 6/163 (3%)
Query: 184 RKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPT 243
+++A + + DK ++V +++ G+S + + K K++ + G + + +
Sbjct: 74 KRKADHKVDMKSKDKRIKVSVEE---GESKITEQIKGNKNTKLKNRENCDDVG--SKENS 128
Query: 244 KDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 303
K S + P +YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKI GKA
Sbjct: 129 KGSEIQNHKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAG 187
Query: 304 MLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDIL 346
MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +I+ + +K++
Sbjct: 188 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVF 230
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 90/96 (93%), Gaps = 1/96 (1%)
Query: 251 EAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
E PK+ YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEII
Sbjct: 7 EPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 66
Query: 310 NYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
NYVQSLQ+QVEFLSMKLA VNP L+++++ +L+K++
Sbjct: 67 NYVQSLQRQVEFLSMKLAAVNPRLDINLDGLLTKEV 102
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 139/242 (57%), Gaps = 31/242 (12%)
Query: 108 ELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDH 167
EL+ + GS N + SSF Q+ SG PNY +E SR S E
Sbjct: 47 ELLQILQFHGSNNDELLESSFS---QFQMLGSGFGPNYNMGFGPPHESISRTSSCHMEPV 103
Query: 168 QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIE 227
E + + T +TR A L + EV+ +++ ++ EKK K+E
Sbjct: 104 DTME---VLLKTGEETRAVA------LKNKRKPEVKTREE----------QKTEKKIKVE 144
Query: 228 QNTGANMRGKQAAKPTKDSS-LSGEAPK--------EYIHMRAKRGQATNSHSLAERVRR 278
T ++M+GK T+ SS S E K +YIH+RA+RGQAT+ HSLAER RR
Sbjct: 145 AETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARR 204
Query: 279 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE 338
EKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQ LQ+QVEFLSMKLA +NPEL L +E
Sbjct: 205 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVE 264
Query: 339 RI 340
+
Sbjct: 265 DV 266
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 114/181 (62%), Gaps = 24/181 (13%)
Query: 246 SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
S +SG +YIH+RA+RGQAT+SHSLAER RREKIS++M+ LQ+LVPGCNKITGKA ML
Sbjct: 177 SKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGML 236
Query: 306 DEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSS 365
DEIINYVQSLQ+QVEFLS+KLAT+NP + +++ L K+ + GF + SS
Sbjct: 237 DEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKEF-----PAYVAAGFPTAAASS 291
Query: 366 RPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEF-------QSLFQMGYDSTSAVDSLGP 418
M ++P QF P+PQ + E QS QM S+++V +
Sbjct: 292 E----------MANLPFL--QFQPVPQGITSCELHMPIDPPQSALQMTTSSSTSVPEMFT 339
Query: 419 N 419
N
Sbjct: 340 N 340
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 139/242 (57%), Gaps = 31/242 (12%)
Query: 108 ELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDH 167
EL+ + GS N + SSF Q+ SG PNY +E SR S E
Sbjct: 47 ELLQILQFHGSNNDELLESSFS---QFQMLGSGFGPNYNMGFGPPHESISRTSSCHMEPV 103
Query: 168 QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIE 227
E + + T +TR A L + EV+ +++ ++ EKK K+E
Sbjct: 104 DTME---VLLKTGEETRAVA------LKNKRKPEVKTREE----------QKTEKKIKVE 144
Query: 228 QNTGANMRGKQAAKPTKDSS-LSGEAPK--------EYIHMRAKRGQATNSHSLAERVRR 278
T ++M+GK T+ SS S E K +YIH+RA+RGQAT+ HSLAER RR
Sbjct: 145 AETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARR 204
Query: 279 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE 338
EKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQ LQ+QVEFLSMKLA +NPEL L +E
Sbjct: 205 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVE 264
Query: 339 RI 340
+
Sbjct: 265 DV 266
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 114/181 (62%), Gaps = 24/181 (13%)
Query: 246 SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
S +SG +YIH+RA+RGQAT+SHSLAER RREKIS++M+ LQ+LVPGCNKITGKA ML
Sbjct: 177 SKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGML 236
Query: 306 DEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSS 365
DEIINYVQSLQ+QVEFLS+KLAT+NP + +++ L K+ + GF + SS
Sbjct: 237 DEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKEF-----PAYVAAGFPTAAASS 291
Query: 366 RPYPPGIFQGTMPSIPGANPQFPPLPQSVLDHEF-------QSLFQMGYDSTSAVDSLGP 418
M ++P QF P+PQ + E QS QM S+++V +
Sbjct: 292 E----------MANLPFL--QFQPVPQGITSCELHMPIDPPQSALQMTTSSSTSVPEMFT 339
Query: 419 N 419
N
Sbjct: 340 N 340
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 139/242 (57%), Gaps = 31/242 (12%)
Query: 108 ELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDH 167
EL+ + GS N + SSF Q+ SG PNY +E SR S E
Sbjct: 30 ELLQILQFHGSNNDELLESSFS---QFQMLGSGFGPNYNMGFGPPHESISRTSSCHMEPV 86
Query: 168 QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIE 227
E + + T +TR A L + EV+ +++ ++ EKK K+E
Sbjct: 87 DTME---VLLKTGEETRAVA------LKNKRKPEVKTREE----------QKTEKKIKVE 127
Query: 228 QNTGANMRGKQAAKPTKDSS-LSGEAPK--------EYIHMRAKRGQATNSHSLAERVRR 278
T ++M+GK T+ SS S E K +YIH+RA+RGQAT+ HSLAER RR
Sbjct: 128 AETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARR 187
Query: 279 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE 338
EKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQ LQ+QVEFLSMKLA +NPEL L +E
Sbjct: 188 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVE 247
Query: 339 RI 340
+
Sbjct: 248 DV 249
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 121/187 (64%), Gaps = 18/187 (9%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++Y+H+RAKRGQATN+HSLAER RREKI+ERM+ LQ+LVPGCNKITGKA+MLDEIINYVQ
Sbjct: 113 EDYVHIRAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQ 172
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRP--YPPG 371
SLQ+QVEFLSMKL+ V+PELN D++ +DIL + +A G+ +++ P Y
Sbjct: 173 SLQRQVEFLSMKLSAVSPELNCDLD---FQDILCPQDARSAFPGYGPRLSNVHPNLYRAS 229
Query: 372 IFQGTMPSIPGANP-----------QFPPLPQS--VLDHEFQSLFQMGYDSTSAVDSLGP 418
+ P + G++P Q PQ V D E +++ + + S + SL
Sbjct: 230 QQGLSRPELYGSSPNPANVHLARTAQLSAFPQRSVVWDEELRNIGSVVFPSDAGTSSLEN 289
Query: 419 NGRLKSE 425
+ +K E
Sbjct: 290 SDPMKVE 296
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 104/154 (67%), Gaps = 3/154 (1%)
Query: 206 KDPSGDSSGILKEQDEKKQKIEQNTGANMRGK-QAAKPTKDSSLSGEAPKEYIHMRAKRG 264
K P G +Q + K E+ A R K A +D +G +YIH+RA+RG
Sbjct: 107 KRPRGKQQVCELDQSSGRGKPEKAKPAGTRKKGDVAAQKQDPRAAGGQKTDYIHVRARRG 166
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
QAT+SHSLAERVRRE+ISERMR LQELVPGC+K+TGKA MLDEIINYVQSLQ+QVEFLSM
Sbjct: 167 QATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSM 226
Query: 325 KLATVNPELNLDIERIL--SKDILHARSGSAATI 356
K+A NP +N DI L + + A S +AAT+
Sbjct: 227 KIAASNPVVNFDIVEDLFGGRRLGQACSPAAATM 260
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
Query: 197 DKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEY 256
DK ++V+ +D + +G + +D K +N G + K +D L +Y
Sbjct: 113 DKRIKVD-SEDGESNITGKISIKDNKTATKSKNRGTCANSSNS-KENEDQKL------DY 164
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
IH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGKA MLDEIINYVQSLQ
Sbjct: 165 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 224
Query: 317 QQVEFLSMKLATVNPELNLDIERILSKDIL 346
+QVEFLSMKLATVNP L + + + K +
Sbjct: 225 RQVEFLSMKLATVNPALEFNSDDLFDKVVF 254
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 80/84 (95%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
K+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQ
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 332
Query: 314 SLQQQVEFLSMKLATVNPELNLDI 337
SLQ QVEFLSMKL+TV+P LD+
Sbjct: 333 SLQCQVEFLSMKLSTVDPRRELDV 356
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 139/242 (57%), Gaps = 31/242 (12%)
Query: 108 ELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDH 167
EL+ + GS N + SSF Q+ SG PNY +E SR S E
Sbjct: 47 ELLQILQFHGSNNDELLESSFS---QFQMLGSGFGPNYNMGFGPPHESISRTSSCHMEPV 103
Query: 168 QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIE 227
E + + T +TR A L + EV+ +++ ++ EKK K+E
Sbjct: 104 DTME---VLLKTGEETRAVA------LKNKRKPEVKTREE----------QKTEKKIKVE 144
Query: 228 QNTGANMRGKQAAKPTKDSS-LSGEAPK--------EYIHMRAKRGQATNSHSLAERVRR 278
T ++M+GK T+ SS S E K +YIH+RA+RGQAT+ HSLAER RR
Sbjct: 145 AETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARR 204
Query: 279 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE 338
EKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQ LQ+QVEFLSMKLA +NPEL L +E
Sbjct: 205 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVE 264
Query: 339 RI 340
+
Sbjct: 265 DV 266
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 80/84 (95%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
K+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQ
Sbjct: 253 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 312
Query: 314 SLQQQVEFLSMKLATVNPELNLDI 337
SLQ QVEFLSMKL+TV+P LD+
Sbjct: 313 SLQCQVEFLSMKLSTVDPRRELDV 336
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 85/95 (89%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+Y+H+RA+RGQAT+SHSLAERVRRE+IS+RM+ LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 177 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIIN 236
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
YVQSLQ+QVEFLSMKLATVNP ++ +L KD+
Sbjct: 237 YVQSLQRQVEFLSMKLATVNPLDFSNLPTLLHKDM 271
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 90/106 (84%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E P++Y+H+RA+RGQAT+SHSLAERVRRE+IS+RM++LQ+LVPGCNK+ GKA+MLDEIIN
Sbjct: 186 EPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 245
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI 356
YVQSLQ+QVEFLSMKLATVNP ++ +L KD A + S ++
Sbjct: 246 YVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDACGASASSVFSL 291
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 90/105 (85%), Gaps = 3/105 (2%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++Y+H+RAKRGQATNSHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQ
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
SLQ+Q+EFLSMKL+ + P LN D++ +DIL + S+A G+
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLDL---QDILCTQDASSAFPGY 220
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 90/105 (85%), Gaps = 3/105 (2%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++Y+H+RAKRGQATNSHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQ
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
SLQ+Q+EFLSMKL+ + P LN D++ +DIL + S+A G+
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLNCDLD---LQDILCTQDASSAFPGY 194
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 118/178 (66%), Gaps = 10/178 (5%)
Query: 195 NTDKNVEVELQ--KDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEA 252
N+ N + LQ + P G + +++++KK K E T ++M+GK T+ SS E
Sbjct: 81 NSGHNRAISLQNKRKPEGKT----EKREKKKIKAEDETESSMKGKTNMSNTETSS---EI 133
Query: 253 PK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
K +YIH+RA+RG+AT+ HSLAER RREKIS++M+ LQ++VPGCNK+TGKA MLDEIINY
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193
Query: 312 VQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYP 369
VQSLQQQVEFLSMKL+ +NPEL I+ + +K +G S M R +P
Sbjct: 194 VQSLQQQVEFLSMKLSVINPELECHIDDLSAKQFQAYFTGLPEADSKQSIMADFRSFP 251
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 91/106 (85%), Gaps = 3/106 (2%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++Y+H+RAKRGQATNSHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQ
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFS 359
SLQ+Q+EFLSMKL+ + P LN D++ +DIL + S+A G++
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLDL---QDILCTQDASSAFPGYN 221
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 101/138 (73%), Gaps = 2/138 (1%)
Query: 197 DKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLS-GEAPKE 255
+ +V L PS D E D K G + RGK+A+K ++ S + E PK
Sbjct: 61 ESSVSAVLDTSPSVDRKRKAAE-DSAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEPPKG 119
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
YIH+RA+RGQAT+SHSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINYVQSL
Sbjct: 120 YIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSL 179
Query: 316 QQQVEFLSMKLATVNPEL 333
Q QVEFLSM++A+++P L
Sbjct: 180 QNQVEFLSMRIASMSPVL 197
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 123/199 (61%), Gaps = 38/199 (19%)
Query: 211 DSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSH 270
DSS L K K G + RGK+ K S+ EAPK YIH+RA+RGQAT+SH
Sbjct: 85 DSSATLSSAHSKDCK----DGKSRRGKR----EKSSTDQEEAPKGYIHVRARRGQATDSH 136
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
SLAERVRRE+ISERMRLLQ LVPGC+K+TGKA++LDEIINYVQSLQ QVEFLSM++A+++
Sbjct: 137 SLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMS 196
Query: 331 PEL---NLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPGA---N 384
P L LD + +L + IG G+FQ + ++PGA N
Sbjct: 197 PVLYGFGLDSDGLLDQ---------TQKIG-------------GMFQEAL-AVPGAPVLN 233
Query: 385 PQFPPLP-QSVLDHEFQSL 402
+ P P Q+++D SL
Sbjct: 234 QEHSPAPSQAMMDTTSYSL 252
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 93/117 (79%), Gaps = 3/117 (2%)
Query: 217 KEQDEKKQKIEQNTGANMRGKQAAKPTKDS--SLSGEAPKEYIHMRAKRGQATNSHSLAE 274
+E KKQK + N + ++ P DS ++ E PK+YIH+RA+RGQAT+SHSLAE
Sbjct: 140 REVKSKKQK-KGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAE 198
Query: 275 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
RVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 199 RVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 131/219 (59%), Gaps = 17/219 (7%)
Query: 159 NVSQSYEDHQICEEAAIGVATNGKTRKRAP-----ESNSLLNTDKNVEVELQKDPSGDSS 213
N S E+ + E++ G G RKR ES+ L++ + + S
Sbjct: 72 NRDGSIEESTVTEQS--GSHGGGGCRKRKDVISEDESSKLVSATTSANELTENGKRMKIS 129
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLA 273
G E + K IE ++ GK A K SS E PK+YIH+RA+RGQAT+SHSLA
Sbjct: 130 GSRYENNGSKTGIEASSSGG--GKSAEK----SSQPPEPPKDYIHVRARRGQATDSHSLA 183
Query: 274 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
ER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +
Sbjct: 184 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGV 243
Query: 334 NLDIERILSKDI--LHARSGSAATIGFSSGMNSSRPYPP 370
N I SKD+ L + AA + F+S S+R + P
Sbjct: 244 NPAINCFPSKDVNQLAPTTFEAAAMMFAS--QSARGFEP 280
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 90/105 (85%), Gaps = 3/105 (2%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++Y+H+RAKRGQATNSHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQ
Sbjct: 123 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 182
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
SLQ+Q+EFLSMKL+ + P LN D++ +DIL + S+A G+
Sbjct: 183 SLQRQIEFLSMKLSAIGPGLNCDLD---LQDILCTQDASSAFPGY 224
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 111/158 (70%), Gaps = 13/158 (8%)
Query: 212 SSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSH 270
+SG E + K ++E ++G KP + + S + PK ++IH+RA+RGQAT+SH
Sbjct: 112 TSGSRDENRDSKTEVETSSG---------KPVEQNPQSADPPKQDFIHVRARRGQATDSH 162
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
SLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN
Sbjct: 163 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 222
Query: 331 PELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY 368
+N IE SKD ++ AA + +SS ++R Y
Sbjct: 223 SRMNSGIEGFPSKD-FGQQTFDAAGVAYSS--QATREY 257
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 103/138 (74%), Gaps = 8/138 (5%)
Query: 218 EQDEK-KQKIEQNTGANMRGKQAAKPTKDSSLSGE--APKEYIHMRAKRGQATNSHSLAE 274
E DE K K E++ N + + KDS+ + + ++YIH+RA+RGQAT+SHSLAE
Sbjct: 10 ENDESVKAKAERSCSENSGDSGSPRALKDSNNRNKILSKQDYIHVRARRGQATDSHSLAE 69
Query: 275 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP--- 331
RVRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+QVE LSMKLA+VNP
Sbjct: 70 RVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVESLSMKLASVNPGPS 129
Query: 332 --ELNLDIERILSKDILH 347
L+ + E L+KD+L
Sbjct: 130 TARLDYNFETALNKDMLQ 147
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 83/92 (90%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHS+AERVRREKISERM+ LQ+LVPGC+KITGKA MLDEIINYVQS
Sbjct: 165 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 224
Query: 315 LQQQVEFLSMKLATVNPELNLDIERILSKDIL 346
LQ+Q+EFLSMKLA VNP + D++ I K+++
Sbjct: 225 LQRQIEFLSMKLAVVNPRPDFDMDDIFDKEVI 256
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 111/158 (70%), Gaps = 13/158 (8%)
Query: 212 SSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSH 270
+SG E + K ++E ++G KP + + S + PK ++IH+RA+RGQAT+SH
Sbjct: 43 TSGSRDENRDSKTEVETSSG---------KPVEQNPQSADPPKQDFIHVRARRGQATDSH 93
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
SLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN
Sbjct: 94 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 153
Query: 331 PELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY 368
+N IE SKD ++ AA + +SS ++R Y
Sbjct: 154 SRMNSGIEGFPSKD-FGQQTFDAAGVAYSS--QATREY 188
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 107/157 (68%), Gaps = 4/157 (2%)
Query: 222 KKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKI 281
+K + N+ + G+++ K + S E P +YIH+RA+RGQAT+SHSLAERVRREKI
Sbjct: 101 RKARNSNNSKEGVEGRKSKKQKRGSK--EEPPTDYIHVRARRGQATDSHSLAERVRREKI 158
Query: 282 SERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERIL 341
SERMR LQ LVPGC+K+TGKA+MLDEIINYVQ+LQ QVEFLSMKL +++P + D L
Sbjct: 159 SERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVV-YDFGSDL 217
Query: 342 SKDILHARSGSAAT-IGFSSGMNSSRPYPPGIFQGTM 377
IL + GS F++ M ++ P P + ++
Sbjct: 218 DGLILQSEMGSPEVGTSFTNAMPTTTPIFPSLLDNSV 254
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 100/131 (76%), Gaps = 3/131 (2%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
KP ++S + ++ ++YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ G
Sbjct: 124 KPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 183
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSS 360
KA++LDEIINY+QSLQ+QVEFLSMKL VN +N +E KD L ++ AA + +
Sbjct: 184 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKD-LGVQTFDAAAMIY-- 240
Query: 361 GMNSSRPYPPG 371
G ++R Y G
Sbjct: 241 GSQATREYAQG 251
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 92/106 (86%), Gaps = 3/106 (2%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQ
Sbjct: 59 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 118
Query: 314 SLQQQVEFLSMKLATVN-PELNLDIERILSKDI-LHARSGSAATIG 357
SLQ+QVEFLSMKLATVN P L+ + +LSK++ + +RS +G
Sbjct: 119 SLQRQVEFLSMKLATVNVPRLDYSYD-LLSKEMPMQSRSPETTLLG 163
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 101/131 (77%), Gaps = 4/131 (3%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSL 272
G +++++KK K E T +M+GK T+ SS E K +YIH+RA+RG+AT+ HSL
Sbjct: 82 GKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS---EIQKPDYIHVRARRGEATDRHSL 138
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AER RREKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQSLQQQVEFLSMKL+ +NPE
Sbjct: 139 AERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPE 198
Query: 333 LNLDIERILSK 343
L I+ + +K
Sbjct: 199 LECHIDDLSAK 209
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 98/131 (74%), Gaps = 3/131 (2%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
KP ++S + ++ ++YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ G
Sbjct: 139 KPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 198
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSS 360
KA++LDEIINY+QSLQ+QVEFLSMKL VN +N +E KD+ +AA I
Sbjct: 199 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAAAMI---Y 255
Query: 361 GMNSSRPYPPG 371
G ++R Y G
Sbjct: 256 GSQATREYAQG 266
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 85/96 (88%), Gaps = 3/96 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
EAP YIH+RA+RGQAT+SHSLAERVRREKISERM++LQ LVPGC+K+TGKA+MLDEIIN
Sbjct: 156 EAPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIIN 215
Query: 311 YVQSLQQQVEFLSMKLATVNP---ELNLDIERILSK 343
YVQSLQ QVEFLSMKLA++NP + +D++ ++ +
Sbjct: 216 YVQSLQNQVEFLSMKLASLNPMYYDFGMDLDALMVR 251
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 108/157 (68%), Gaps = 4/157 (2%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSL 272
G +++++KK K E T +M+GK T+ SS E K +YIH+RA+RG+AT+ HSL
Sbjct: 94 GKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS---EIQKPDYIHVRARRGEATDRHSL 150
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AER RREKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQSLQQQVEFLSMKL+ +NPE
Sbjct: 151 AERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPE 210
Query: 333 LNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYP 369
L I+ + +K +G S M R +P
Sbjct: 211 LECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFP 247
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 91/121 (75%)
Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVR 277
E + K+QKI++ + T+ L E K+YIH+RA+RGQAT+SHSLAER R
Sbjct: 95 EGENKRQKIDEVCDGKAEAESLGTETEQKKLQIEPTKDYIHVRARRGQATDSHSLAERAR 154
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N I
Sbjct: 155 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGI 214
Query: 338 E 338
E
Sbjct: 215 E 215
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 108/157 (68%), Gaps = 4/157 (2%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSL 272
G +++++KK K E T +M+GK T+ SS E K +YIH+RA+RG+AT+ HSL
Sbjct: 98 GKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS---EIQKPDYIHVRARRGEATDRHSL 154
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AER RREKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQSLQQQVEFLSMKL+ +NPE
Sbjct: 155 AERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPE 214
Query: 333 LNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYP 369
L I+ + +K +G S M R +P
Sbjct: 215 LECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFP 251
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 111/158 (70%), Gaps = 13/158 (8%)
Query: 212 SSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSH 270
+SG E + K ++E ++G KP + + S + PK ++IH+RA+RGQAT+SH
Sbjct: 112 TSGSRDENRDSKTEVETSSG---------KPVEQNPQSADPPKQDFIHVRARRGQATDSH 162
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
SLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN
Sbjct: 163 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 222
Query: 331 PELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY 368
+N IE SKD ++ AA + +SS ++R Y
Sbjct: 223 SRMNSGIEGFPSKD-FGQQTFDAAGVAYSS--QATREY 257
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 101/131 (77%), Gaps = 4/131 (3%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSL 272
G +++++KK K E T +M+GK T+ SS E K +YIH+RA+RG+AT+ HSL
Sbjct: 98 GKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS---EIQKPDYIHVRARRGEATDRHSL 154
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AER RREKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQSLQQQVEFLSMKL+ +NPE
Sbjct: 155 AERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPE 214
Query: 333 LNLDIERILSK 343
L I+ + +K
Sbjct: 215 LECHIDDLSAK 225
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 108/157 (68%), Gaps = 4/157 (2%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSL 272
G +++++KK K E T +M+GK T+ SS E K +YIH+RA+RG+AT+ HSL
Sbjct: 98 GKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS---EIQKPDYIHVRARRGEATDRHSL 154
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AER RREKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQSLQQQVEFLSMKL+ +NPE
Sbjct: 155 AERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPE 214
Query: 333 LNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYP 369
L I+ + +K +G S M R +P
Sbjct: 215 LECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFP 251
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 101/131 (77%), Gaps = 4/131 (3%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSL 272
G +++++KK K E T +M+GK T+ SS E K +YIH+RA+RG+AT+ HSL
Sbjct: 98 GKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS---EIQKPDYIHVRARRGEATDRHSL 154
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AER RREKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQSLQQQVEFLSMKL+ +NPE
Sbjct: 155 AERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPE 214
Query: 333 LNLDIERILSK 343
L I+ + +K
Sbjct: 215 LECHIDDLSAK 225
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 105/152 (69%), Gaps = 11/152 (7%)
Query: 226 IEQNTGANMRGKQAAKPTKDSSLSGE------APKEYIHMRAKRGQATNSHSLAERVRRE 279
+EQ A++R K A+P+ + + + ++YIH+RA+RGQAT+SHSLAER RRE
Sbjct: 36 LEQRAAASVR-KHEAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATDSHSLAERARRE 94
Query: 280 KISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIER 339
KISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N IE
Sbjct: 95 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEV 154
Query: 340 ILSKDILHARSGSAATIGFSSGMNSSRPYPPG 371
SKD + T G + G ++R Y G
Sbjct: 155 FASKDF----GQTFDTAGMAFGSQATREYSRG 182
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 104/136 (76%), Gaps = 5/136 (3%)
Query: 202 VELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGK----QAAKPTKDSSLSGEAPKEYI 257
+E ++ P+ DS+ + Q ++ K +Q + + RGK + A + S+ EA + YI
Sbjct: 79 MERKRKPAEDSATLSSAQSKEDCKQQQESKSR-RGKRPHNKEANTEEKSATEDEATRGYI 137
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H+RA+RGQAT+SHSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINYVQSLQ
Sbjct: 138 HVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQN 197
Query: 318 QVEFLSMKLATVNPEL 333
QVEFLSM++A+++P L
Sbjct: 198 QVEFLSMRIASMSPVL 213
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 104/136 (76%), Gaps = 5/136 (3%)
Query: 202 VELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGK----QAAKPTKDSSLSGEAPKEYI 257
+E ++ P+ DS+ + Q ++ K +Q + + RGK + A + S+ EA + YI
Sbjct: 79 MERKRKPAEDSATLSSAQSKEDCKQQQESKSR-RGKRPHNKEANTEEKSATEDEATRGYI 137
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H+RA+RGQAT+SHSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINYVQSLQ
Sbjct: 138 HVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQN 197
Query: 318 QVEFLSMKLATVNPEL 333
QVEFLSM++A+++P L
Sbjct: 198 QVEFLSMRIASMSPVL 213
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
T S+++ +YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGCNK+TGKA
Sbjct: 148 TSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKA 207
Query: 303 VMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI-ERILSKDILHARSGSAA 354
MLDEIINYVQSLQ+QVEFLSMK+A NP +N +I E + + + A AA
Sbjct: 208 GMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQAACNPAA 260
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 94/129 (72%)
Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVR 277
E + K+QKI++ + T+ E K+YIH+RA+RGQAT+SHSLAER R
Sbjct: 89 EGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERAR 148
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N I
Sbjct: 149 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGI 208
Query: 338 ERILSKDIL 346
E K+++
Sbjct: 209 EVFPPKEVM 217
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
T S+++ +YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGCNK+TGKA
Sbjct: 148 TSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKA 207
Query: 303 VMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI-ERILSKDILHARSGSAA 354
MLDEIINYVQSLQ+QVEFLSMK+A NP +N +I E + + + A AA
Sbjct: 208 GMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQAACNPAA 260
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 94/129 (72%)
Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVR 277
E + K+QKI++ + T+ E K+YIH+RA+RGQAT+SHSLAER R
Sbjct: 95 EGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERAR 154
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N I
Sbjct: 155 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGI 214
Query: 338 ERILSKDIL 346
E K+++
Sbjct: 215 EVFPPKEVM 223
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 94/123 (76%), Gaps = 5/123 (4%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIIN
Sbjct: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLD--IERILSKDILHARSGSAATIGFSSGMNSSRPY 368
Y+QSLQ+QVEFLSMKL VN +N+ IE K+I++ +A G G ++R Y
Sbjct: 199 YIQSLQRQVEFLSMKLEAVNSRMNITPGIEGFTVKNIVNQPYDAA---GILYGSQAARDY 255
Query: 369 PPG 371
G
Sbjct: 256 TQG 258
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 107/162 (66%), Gaps = 9/162 (5%)
Query: 216 LKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSG-----EAPK-EYIHMRAKRGQATNS 269
+ + D K+ K N N K A+P+ + E PK +YIH+RA+RGQAT+S
Sbjct: 89 VNDSDAKRLKTSGNLDENHDSKSEAEPSSGKHVEQNTQPPELPKQDYIHVRARRGQATDS 148
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 329
HSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL V
Sbjct: 149 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 208
Query: 330 NPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPG 371
N + IE SKD ++ AA + F G ++R Y G
Sbjct: 209 NTRMTPGIEAFPSKD-FGQQTFDAAGMAF--GSQATRDYNRG 247
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 217 KEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERV 276
K+ E K K ++ +M+ ++ +P + E P Y+H+RA+RGQAT+SHSLAERV
Sbjct: 131 KDVKEVKSKRQKKCRGDMK-QEEKRPKAVKKVPEEPPTGYVHVRARRGQATDSHSLAERV 189
Query: 277 RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
RREKISERM++LQ LVPGC+K+TGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP
Sbjct: 190 RREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNP 244
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 93/125 (74%), Gaps = 3/125 (2%)
Query: 222 KKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKI 281
KKQK N + +A K + E P YIH+RA+RGQAT+SHSLAERVRREKI
Sbjct: 135 KKQKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATDSHSLAERVRREKI 194
Query: 282 SERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP---ELNLDIE 338
SERM++LQ LVPGC+K+TGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP + +D +
Sbjct: 195 SERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPLFYDFGMDFD 254
Query: 339 RILSK 343
++ +
Sbjct: 255 ALMVR 259
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 85/95 (89%), Gaps = 6/95 (6%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQ
Sbjct: 71 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 130
Query: 314 SLQQQVEFLSMKLATVNP---ELNLDIERILSKDI 345
SLQ+Q+EFLSMKLA VNP + N D +LSKD+
Sbjct: 131 SLQRQIEFLSMKLAAVNPPRLDHNYD---LLSKDM 162
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 104/136 (76%), Gaps = 5/136 (3%)
Query: 202 VELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGK----QAAKPTKDSSLSGEAPKEYI 257
+E ++ P+ DS+ + Q ++ K +Q + + RGK + A + S+ EA + YI
Sbjct: 79 MERKRKPAEDSATLSSAQSKEDCKQQQESKSR-RGKRPHNKEANTEEKSATEDEATRGYI 137
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H+RA+RGQAT+SHSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINYVQSLQ
Sbjct: 138 HVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQN 197
Query: 318 QVEFLSMKLATVNPEL 333
QVEFLSM++A+++P L
Sbjct: 198 QVEFLSMRIASMSPVL 213
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 111/168 (66%), Gaps = 23/168 (13%)
Query: 218 EQDEKKQKIEQNT-GANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAER 275
E D K + E ++ G N +Q+ KP EAPK +YIH+RA+RGQAT+SHSLAER
Sbjct: 103 ENDGFKAEAEASSAGGNKSSEQSNKPC-------EAPKQDYIHVRARRGQATDSHSLAER 155
Query: 276 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N+
Sbjct: 156 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNM 215
Query: 336 D--IERILSK-------DILHARSGSAATIGFSSGMNSSRPYPPGIFQ 374
+ I+ SK DI GS A G++ G + PPG
Sbjct: 216 NPTIDGFPSKDVGTQPFDIAGMVFGSQAARGYAQGSS-----PPGWLH 258
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 110/193 (56%), Gaps = 60/193 (31%)
Query: 198 KNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI 257
K + +L D +GD +D K + G N +GK D++ GE PK+YI
Sbjct: 231 KAKKCKLSADAAGD-------EDTKPVAGDAGHGGNGKGK-----VLDAA--GEPPKDYI 276
Query: 258 HMRAKRGQATNSHSLAERV--------------------------------RREKISERM 285
H+RA+RGQAT+SHSLAERV RREKISERM
Sbjct: 277 HVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERM 336
Query: 286 RLLQELVPGCNKI--------------TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
+LLQ+LVPGCNK+ TGKAVMLDEIINYVQSLQ+QVEFLSMKL+TVNP
Sbjct: 337 KLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNP 396
Query: 332 ELNLDIERILSKD 344
+L+ D++ + KD
Sbjct: 397 QLDFDVDNFIPKD 409
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 94/129 (72%)
Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVR 277
E + K+QKI++ + T+ E K+YIH+RA+RGQAT+SHSLAER R
Sbjct: 95 EGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERAR 154
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N I
Sbjct: 155 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGI 214
Query: 338 ERILSKDIL 346
E K+++
Sbjct: 215 EVFPPKEVM 223
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
Query: 249 SGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
S E P YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ LVPGC+K+TGKA+MLDEI
Sbjct: 161 SEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEI 220
Query: 309 INYVQSLQQQVEFLSMKLATVNP---ELNLDIERILSK 343
INYVQSLQ QVEFLSMKLA+VNP + +D++ ++ +
Sbjct: 221 INYVQSLQNQVEFLSMKLASVNPMFYDFGMDLDALMVR 258
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 110/193 (56%), Gaps = 60/193 (31%)
Query: 198 KNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI 257
K + +L D +GD +D K + G N +GK D++ GE PK+YI
Sbjct: 231 KAKKCKLSADAAGD-------EDTKPVAGDAGHGGNGKGK-----VLDAA--GEPPKDYI 276
Query: 258 HMRAKRGQATNSHSLAERV--------------------------------RREKISERM 285
H+RA+RGQAT+SHSLAERV RREKISERM
Sbjct: 277 HVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERM 336
Query: 286 RLLQELVPGCNKI--------------TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
+LLQ+LVPGCNK+ TGKAVMLDEIINYVQSLQ+QVEFLSMKL+TVNP
Sbjct: 337 KLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNP 396
Query: 332 ELNLDIERILSKD 344
+L+ D++ + KD
Sbjct: 397 QLDFDVDNFIPKD 409
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 80/85 (94%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++Y+H+RAKRGQATNSHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQ
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 314 SLQQQVEFLSMKLATVNPELNLDIE 338
SLQ+Q+EFLSMKL+ + P LN D++
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLNCDLD 177
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/119 (62%), Positives = 94/119 (78%), Gaps = 7/119 (5%)
Query: 227 EQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMR 286
E T +N+ GK+ +KP ++ ++YIH+RA+RGQAT+SHSLAERVRREKISERM+
Sbjct: 8 ENTTNSNL-GKENSKPGAGNT------QDYIHVRARRGQATDSHSLAERVRREKISERMK 60
Query: 287 LLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
LQ+LVPGC+K+TGKA+MLDEIINYVQSLQ+QVEFLSMKLA V P L D ++ D+
Sbjct: 61 TLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVEFLSMKLAAVKPALYTDAYQVRKPDV 119
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 102/133 (76%), Gaps = 4/133 (3%)
Query: 202 VELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLS-GEAPKEYIHMR 260
+E ++ + DS+ + Q + +Q + RGK+ K T++ S + EA K YIH+R
Sbjct: 67 MERKRKATEDSATLSSAQ---SKDCKQQESKSKRGKRPNKETEEKSTTEDEATKGYIHVR 123
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+RGQAT+SHSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINYVQSLQ QVE
Sbjct: 124 ARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVE 183
Query: 321 FLSMKLATVNPEL 333
FLSM++A+++P L
Sbjct: 184 FLSMRIASMSPVL 196
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 93/124 (75%), Gaps = 2/124 (1%)
Query: 228 QNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRL 287
Q+ + ++ + D + +G ++Y H+RAKRGQATNSHSLAER RREKI+ RM+L
Sbjct: 123 QDEARALLQREVSMECADENAAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKL 182
Query: 288 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIER--ILSKDI 345
LQ+LVPGCNKITGKA+MLDEIINYVQSLQ+QVEFLSMKL+ + P N D+E + +D
Sbjct: 183 LQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAIRPGFNRDLELQDVRLRDP 242
Query: 346 LHAR 349
LH R
Sbjct: 243 LHTR 246
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 80/85 (94%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++Y+H+RAKRGQATNSHSLAER RREKI+ERM+LLQ+LVPGCNKITGKA+MLDEIINYVQ
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 314 SLQQQVEFLSMKLATVNPELNLDIE 338
SLQ+Q+EFLSMKL+ + P LN D++
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLD 203
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 84/96 (87%), Gaps = 3/96 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E P YIH+RA+RGQAT+SHSLAERVRREKISERM++LQ LVPGC+K+TGKA+MLDEIIN
Sbjct: 156 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIIN 215
Query: 311 YVQSLQQQVEFLSMKLATVNP---ELNLDIERILSK 343
YVQSLQ QVEFLSMKLA+VNP +L D++ +L +
Sbjct: 216 YVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVR 251
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 84/96 (87%), Gaps = 3/96 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E P YIH+RA+RGQAT+SHSLAERVRREKISERM++LQ LVPGC+K+TGKA+MLDEIIN
Sbjct: 139 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIIN 198
Query: 311 YVQSLQQQVEFLSMKLATVNP---ELNLDIERILSK 343
YVQSLQ QVEFLSMKLA+VNP +L D++ +L +
Sbjct: 199 YVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVR 234
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 99/131 (75%), Gaps = 4/131 (3%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSL 272
G +++++KK K E T +M+GK T+ SS E K +YIH+RA+RG+AT+ HSL
Sbjct: 98 GKTEKREKKKIKTEAETETSMKGKSNMSNTETSS---EIQKPDYIHVRARRGEATDRHSL 154
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AER RREKIS++M+ LQ++VPGC K+TGKA MLDEIINYVQSLQQQVEFLSMKL+ +NPE
Sbjct: 155 AERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVLNPE 214
Query: 333 LNLDIERILSK 343
L I + +K
Sbjct: 215 LEFHINELSTK 225
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 84/96 (87%), Gaps = 3/96 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
EAP YIH+RA+RGQAT+SHSLAERVRREKISERM++LQ LVPGC+K+TGKA+MLDEIIN
Sbjct: 145 EAPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIIN 204
Query: 311 YVQSLQQQVEFLSMKLATVNP---ELNLDIERILSK 343
YVQSLQ QVEFLSMKL ++NP + +D++ ++ +
Sbjct: 205 YVQSLQNQVEFLSMKLTSLNPMYYDFGMDLDALMVR 240
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 100/131 (76%), Gaps = 4/131 (3%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSL 272
G +++++KK K E T +M+GK + SS E K +YIH+RA+RG+AT+ HSL
Sbjct: 82 GKTEKREKKKIKAEDETEPSMKGKSNMSNXETSS---EIQKPDYIHVRARRGEATDRHSL 138
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AER RREKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQSLQQQVEFLSMKL+ +NPE
Sbjct: 139 AERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPE 198
Query: 333 LNLDIERILSK 343
L I+ + +K
Sbjct: 199 LECHIDDLSAK 209
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 78/84 (92%)
Query: 250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
GE P YIH+RA+RGQAT+SHSLAERVRRE+ISERM++LQ LVPGC+KITGKA+MLDEII
Sbjct: 165 GEPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEII 224
Query: 310 NYVQSLQQQVEFLSMKLATVNPEL 333
NYVQSLQ QVEFLSMKLA+VNP L
Sbjct: 225 NYVQSLQNQVEFLSMKLASVNPLL 248
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 95/130 (73%), Gaps = 4/130 (3%)
Query: 235 RGKQAAKPTKDSSLSGEAPKE--YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELV 292
RG +K K +S S +APKE YIH+RA+RGQAT+SHSLAERVRRE+ISERM+ LQELV
Sbjct: 107 RGGATSKNKKKASGS-DAPKETDYIHVRARRGQATDSHSLAERVRRERISERMKYLQELV 165
Query: 293 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGS 352
PGC+KI GKA LDEIINYVQSLQ+QVEFLSMKLA P ++L ++ +H S
Sbjct: 166 PGCSKIMGKASTLDEIINYVQSLQRQVEFLSMKLAAAEPRMHLSSSNFFDREEVHGCSTW 225
Query: 353 AATI-GFSSG 361
A + GF G
Sbjct: 226 DAGLHGFHDG 235
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 82/95 (86%)
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
T S+++ +YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGCNK+TGKA
Sbjct: 148 TSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKA 207
Query: 303 VMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
MLDEIINYVQSLQ+QVEFLSMK+A NP +N +I
Sbjct: 208 GMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNI 242
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 90/121 (74%)
Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVR 277
E + K+QKI++ + T+ E K+YIH+RA+RGQAT+SHSLAER R
Sbjct: 95 EGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERAR 154
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N I
Sbjct: 155 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGI 214
Query: 338 E 338
E
Sbjct: 215 E 215
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 90/121 (74%)
Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVR 277
E + K+QKI++ + T+ E K+YIH+RA+RGQAT+SHSLAER R
Sbjct: 95 EGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERAR 154
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
REKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N I
Sbjct: 155 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGI 214
Query: 338 E 338
E
Sbjct: 215 E 215
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 85/96 (88%), Gaps = 3/96 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E P YIH+RA+RGQAT+SHSLAERVRREKISERM++LQ+LVPGC+++TGKA++LDEIIN
Sbjct: 137 EVPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIIN 196
Query: 311 YVQSLQQQVEFLSMKLATVNP---ELNLDIERILSK 343
YVQSLQ QVEFLSMKLA+VNP + +D++ +L +
Sbjct: 197 YVQSLQNQVEFLSMKLASVNPIFFDFAMDLDTLLVR 232
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 89/113 (78%), Gaps = 3/113 (2%)
Query: 235 RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
RG + + +K+ E PK YIH+RA+RGQAT+SHSLAERVRRE+ISERMR+LQ LVPG
Sbjct: 96 RGGKRGRSSKEVEDDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPG 155
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL---NLDIERILSKD 344
C+K+TGKA++LDEIINYVQSLQ QVEFLSMK+A+++P L +D S D
Sbjct: 156 CDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAFSTD 208
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 107/142 (75%), Gaps = 15/142 (10%)
Query: 206 KDPSGDSSGILKE---QDEKKQKIEQNTGA-----------NMRGKQAAKPTKDSSLSGE 251
+D S ++S ++ + QD+K++ E++T + N R + K ++D + E
Sbjct: 41 EDASMETSSVVLDTSPQDKKRKPREEDTASLNSAHSKEAKENGRKRGGKKHSRDQ-MEEE 99
Query: 252 APKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
AP+ +IH+RA+RGQAT+SHSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINY
Sbjct: 100 APQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINY 159
Query: 312 VQSLQQQVEFLSMKLATVNPEL 333
VQSLQ QVEFLSM++A+++P L
Sbjct: 160 VQSLQNQVEFLSMRIASLSPVL 181
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 110/193 (56%), Gaps = 60/193 (31%)
Query: 198 KNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI 257
K + +L D +GD +D K + G N +GK D++ GE PK+YI
Sbjct: 110 KAKKCKLSADAAGD-------EDTKPVAGDAGHGGNGKGK-----VLDAA--GEPPKDYI 155
Query: 258 HMRAKRGQATNSHSLAERV--------------------------------RREKISERM 285
H+RA+RGQAT+SHSLAERV RREKISERM
Sbjct: 156 HVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERM 215
Query: 286 RLLQELVPGCNKI--------------TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
+LLQ+LVPGCNK+ TGKAVMLDEIINYVQSLQ+QVEFLSMKL+TVNP
Sbjct: 216 KLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNP 275
Query: 332 ELNLDIERILSKD 344
+L+ D++ + KD
Sbjct: 276 QLDFDVDNFIPKD 288
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 88/110 (80%), Gaps = 7/110 (6%)
Query: 237 KQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGC 295
+Q+AKP + E PK +YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGC
Sbjct: 129 EQSAKP------ASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 182
Query: 296 NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
NK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN LN IE KD
Sbjct: 183 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEAFPPKDF 232
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/101 (70%), Positives = 87/101 (86%), Gaps = 2/101 (1%)
Query: 235 RGKQAAKPT--KDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELV 292
RGK+ K T K S+ EA K YIH+RA+RGQAT+SHSLAERVRRE+ISERMR+LQ LV
Sbjct: 105 RGKRPRKETEEKSSTDEDEASKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALV 164
Query: 293 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
PGC+K+TGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 165 PGCDKVTGKAMVLDEIINYVQSLQNQVEFLSMRIASMSPVL 205
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 100/136 (73%), Gaps = 7/136 (5%)
Query: 240 AKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 299
+KP K+S + ++YIH+RA+RGQAT+SHSLAER RRE+ISERM++LQ+LVPGCNK+
Sbjct: 74 SKPDKNSKPAEPPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVI 133
Query: 300 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD--IERILSKDI-LHARSGSAATI 356
GKA++LDEIINY+QSLQQQVEFLSMKL VN +N++ E SKD+ L G+
Sbjct: 134 GKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRINVNPSFEGFHSKDLGLQPIDGA---- 189
Query: 357 GFSSGMNSSRPYPPGI 372
G G ++R Y G+
Sbjct: 190 GMIFGSQTAREYAQGL 205
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 90/110 (81%)
Query: 235 RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
+G+ + K +K+ S Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQELVPG
Sbjct: 177 KGRGSTKKSKNESNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPG 236
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
CNKI+G A++LDEIIN+VQSLQ+QVEFLSM+LA VNP ++ +IE IL+ +
Sbjct: 237 CNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIESILATE 286
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 82/100 (82%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGC+K+TGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 315 LQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAA 354
LQ+QVEFLSMK+A NP ++ DI L L G AA
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQACGPAA 241
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 100/139 (71%), Gaps = 7/139 (5%)
Query: 195 NTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK 254
++D N K+ SG S + +D ++ + +G GK+ K + E PK
Sbjct: 54 SSDDNKACRKHKEDSGASFSSARSKDSNSKESSKRSG----GKRDRSSKK---VDEEEPK 106
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
YIH+RA+RGQAT++HSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINYVQS
Sbjct: 107 GYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQS 166
Query: 315 LQQQVEFLSMKLATVNPEL 333
LQ QVEFLSM++A+++P L
Sbjct: 167 LQNQVEFLSMRIASLSPVL 185
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 82/100 (82%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGC+K+TGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 315 LQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAA 354
LQ+QVEFLSMK+A NP ++ DI L L G AA
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQACGPAA 241
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
Query: 237 KQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
K A+ +++ +G+ +YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGC+
Sbjct: 129 KACARKKPEAAAAGQ-KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCD 187
Query: 297 KITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
K+TGKA MLDEIINYVQSLQ+QVEFLSMK+A NP +N +I
Sbjct: 188 KVTGKAGMLDEIINYVQSLQKQVEFLSMKIAAANPVVNFNI 228
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 92/120 (76%), Gaps = 9/120 (7%)
Query: 230 TGANMRGKQAAKPTKDSS-LSGEAPK--------EYIHMRAKRGQATNSHSLAERVRREK 280
T +NM+GK T+ SS S E K +YIH+RA+RGQAT+ HSLAER RREK
Sbjct: 149 TESNMKGKSNMGNTEASSDTSKEISKGASESQKLDYIHVRARRGQATDRHSLAERARREK 208
Query: 281 ISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERI 340
IS++M+ LQ+LVPGCNK+TGKA MLDEIINYVQSLQ+QVEFLSMKLA +NPEL L +E +
Sbjct: 209 ISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSMKLAVLNPELELAVEDL 268
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/111 (62%), Positives = 87/111 (78%)
Query: 228 QNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRL 287
Q+ + ++ + D + +G ++Y H+RAKRGQATNSHSLAER RREKI+ RM+L
Sbjct: 123 QDEARALLQREVSMECADENAAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKL 182
Query: 288 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE 338
LQ+LVPGCNKITGKA+MLDEIINYVQSLQ+QVEFLSMKL+ + P N D+E
Sbjct: 183 LQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAIRPGFNRDLE 233
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 98/132 (74%), Gaps = 11/132 (8%)
Query: 218 EQDEKKQKIEQNT-GANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAER 275
E D K + E ++ G N +Q+ KP EAPK +YIH+RA+RGQAT+SHSLAER
Sbjct: 78 ENDGFKAEAEASSVGGNKSSEQSNKPC-------EAPKPDYIHVRARRGQATDSHSLAER 130
Query: 276 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
RREKISERM++LQ+L PGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N
Sbjct: 131 ARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNT 190
Query: 336 D--IERILSKDI 345
+ I+ SKD+
Sbjct: 191 NPTIDGFPSKDV 202
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 221 EKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAP-KEYIHMRAKRGQATNSHSLAERVRRE 279
+K+ + +N + G + K K S E P K+YIH+RA+RGQAT+SHSLAERVRRE
Sbjct: 98 KKRGRKARNVSNSKEGVEGTKSKKQKRGSKEEPPKDYIHVRARRGQATDSHSLAERVRRE 157
Query: 280 KISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
KISERMR LQ LVPGC+K+TGKA+MLDEIINYVQ+LQ QVEFLSMKL +++P
Sbjct: 158 KISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFLSMKLTSISP 209
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 109/176 (61%), Gaps = 17/176 (9%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLA 273
G ++E E+ QK + GK+ + S G A YIH+RA+RGQAT+SHSLA
Sbjct: 110 GEVEEGKERDQKAKS-------GKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLA 162
Query: 274 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
ERVRREKISERM+ LQ LVPGC+K+TGKA+MLDEIINYVQSLQ QVEFLSMKLA++NP +
Sbjct: 163 ERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNP-I 221
Query: 334 NLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPGANPQFPP 389
D L ++ + S ++I P P + Q ++ S P PP
Sbjct: 222 FFDFRMDLDGLMIQPETTSLSSI---------TPTLPAMAQCSVVSQPALIDTTPP 268
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 100/141 (70%), Gaps = 11/141 (7%)
Query: 209 SGDSSGILKEQDEKKQKI---EQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRG 264
+ + + + E D K+ K +N + G++ AKP E PK +YIH+RA+RG
Sbjct: 97 TSNDANAMNEGDNKRLKTGGSNENHESKAEGEETAKPA-------EPPKQDYIHVRARRG 149
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
QAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSM
Sbjct: 150 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 209
Query: 325 KLATVNPELNLDIERILSKDI 345
KL VN L+ IE SK+
Sbjct: 210 KLEAVNSRLSPGIEGFPSKEF 230
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 109/176 (61%), Gaps = 17/176 (9%)
Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLA 273
G ++E E+ QK + GK+ + S G A YIH+RA+RGQAT+SHSLA
Sbjct: 142 GEVEEGKERDQKAKS-------GKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLA 194
Query: 274 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
ERVRREKISERM+ LQ LVPGC+K+TGKA+MLDEIINYVQSLQ QVEFLSMKLA++NP +
Sbjct: 195 ERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNP-I 253
Query: 334 NLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPSIPGANPQFPP 389
D L ++ + S ++I P P + Q ++ S P PP
Sbjct: 254 FFDFRMDLDGLMIQPETTSLSSI---------TPTLPAMAQCSVVSQPALIDTTPP 300
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGC+K+TGKA MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 315 LQQQVEFLSMKLATVNPELNLDI-ERILSKDILHAR 349
LQ+QVEFLSMK+A NP ++ DI E + + + +R
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQSR 234
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/97 (70%), Positives = 82/97 (84%), Gaps = 3/97 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK YIH+RA+RGQAT+SHSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIIN
Sbjct: 103 EEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIIN 162
Query: 311 YVQSLQQQVEFLSMKLATVNPEL---NLDIERILSKD 344
YVQSLQ QVEFLSMK+A+++P L +D S D
Sbjct: 163 YVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAFSTD 199
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/97 (70%), Positives = 82/97 (84%), Gaps = 3/97 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK YIH+RA+RGQAT+SHSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIIN
Sbjct: 113 EEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIIN 172
Query: 311 YVQSLQQQVEFLSMKLATVNPEL---NLDIERILSKD 344
YVQSLQ QVEFLSMK+A+++P L +D S D
Sbjct: 173 YVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAFSTD 209
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGC+K+TGKA MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 315 LQQQVEFLSMKLATVNPELNLDI-ERILSKDILHAR 349
LQ+QVEFLSMK+A NP ++ DI E + + + +R
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQSR 234
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 109/164 (66%), Gaps = 12/164 (7%)
Query: 210 GDSSGILKEQDEKKQKIEQNTG-ANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQAT 267
G SG E K + E ++G N Q+ +P+ EAPK +YIH+RA+RGQAT
Sbjct: 87 GMKSGDGNENSNSKTEAEASSGLCNKLADQSNQPS-------EAPKQDYIHVRARRGQAT 139
Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 327
+SHSLAER RREKISERM +LQ+LVPGCNK+ GKA +LDEIINY+Q+LQ+QVEFLSMKL
Sbjct: 140 DSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLE 199
Query: 328 TVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPG 371
VN ++N IE KD A++ ++ FSS + R Y G
Sbjct: 200 AVNSQMNPGIEGFPPKD-FGAQAYETPSLAFSS--QAPREYAQG 240
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGC+K+TGKA MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 315 LQQQVEFLSMKLATVNPELNLDI-ERILSKDILHAR 349
LQ+QVEFLSMK+A NP ++ DI E + + + +R
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQSR 234
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 96/123 (78%), Gaps = 12/123 (9%)
Query: 221 EKKQKIEQNTGANM------------RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
EKK+K +++T A++ R + K K+++ E PK YIH+RA+RGQAT+
Sbjct: 55 EKKRKPKEDTTASLNSAHSKETKESTRKRGGKKQDKETAEEEEEPKGYIHVRARRGQATD 114
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
SHSL+ERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINYV+SLQ QVEFLSM++A+
Sbjct: 115 SHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLSMRIAS 174
Query: 329 VNP 331
++P
Sbjct: 175 LSP 177
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 78/90 (86%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSL
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKDI 345
Q+QVEFLSMKL VN LN IE KD+
Sbjct: 208 QRQVEFLSMKLEAVNSRLNTGIEAFPPKDV 237
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 77/83 (92%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGC+K+TGKA MLDEIINYVQS
Sbjct: 149 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 208
Query: 315 LQQQVEFLSMKLATVNPELNLDI 337
LQ+QVEFLSMK+A NP ++ DI
Sbjct: 209 LQKQVEFLSMKIAASNPVVSFDI 231
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 92/122 (75%), Gaps = 4/122 (3%)
Query: 251 EAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
EAPK+ YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA +LDEII
Sbjct: 50 EAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 109
Query: 310 NYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYP 369
NY+Q+LQ+QVEFLSMKL VN N IE KD A++ A + F G+ + R Y
Sbjct: 110 NYIQALQRQVEFLSMKLEAVNSRTNSGIEGFPPKD-FGAQAYDAPNLAF--GLQAPREYV 166
Query: 370 PG 371
G
Sbjct: 167 QG 168
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 77/89 (86%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSL
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVEFLSMKL VN LN IE KD
Sbjct: 208 QRQVEFLSMKLEAVNSRLNTGIEAFPPKD 236
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 100/141 (70%), Gaps = 21/141 (14%)
Query: 216 LKEQDEKKQK----IEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHS 271
LK +EKK + + + + K+AA GE P YIH+RA+RGQAT+SHS
Sbjct: 141 LKGLEEKKARRVVLHQHDDDVKKKAKEAA--------GGEPPAGYIHVRARRGQATDSHS 192
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
LAERVRREKISERM++LQ LVPGC+K+TGKA+MLDEII+YVQSLQ QVEFLSMKLA++NP
Sbjct: 193 LAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLNP 252
Query: 332 ---------ELNLDIERILSK 343
+++ D+ R L+K
Sbjct: 253 LMYEFGPGIDMHPDVLRQLAK 273
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 86/107 (80%)
Query: 227 EQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMR 286
+ N+ + + K + + E PK YIH+RA+RGQAT+SHSLAERVRRE+ISERMR
Sbjct: 77 DSNSKESTKKKGGKRDRSSKEVDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMR 136
Query: 287 LLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
+LQ LVPGC+K+TGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 137 VLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVL 183
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 97/135 (71%), Gaps = 7/135 (5%)
Query: 199 NVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIH 258
N K+ SG S + +D ++ + +G GK+ K + E PK YIH
Sbjct: 58 NKACRKHKEDSGASFSSARSKDSNSKESSKRSG----GKRDRSSKK---VDEEEPKGYIH 110
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT++HSLAERVRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINYVQSLQ Q
Sbjct: 111 VRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 170
Query: 319 VEFLSMKLATVNPEL 333
VEFLSM++A+++P L
Sbjct: 171 VEFLSMRIASLSPVL 185
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 106/163 (65%), Gaps = 13/163 (7%)
Query: 220 DEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEA----------PKE-YIHMRAKRGQATN 268
D + ++ + N +N +G + DS +G+A PK+ YIH+RA+RGQAT+
Sbjct: 76 DLEAKRSKTNKSSNNKGSLRTEVETDSRSAGKAVSKNIPAAEPPKQDYIHVRARRGQATD 135
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
SHSLAER RREKISERM++LQ+LVPGCNK+ GKA +LDEIINY+QSLQ QVEFLSMKL
Sbjct: 136 SHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEA 195
Query: 329 VNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPG 371
VN + N +E +KD +A + F + +SR Y G
Sbjct: 196 VNAQANQGVEVFPAKDYGSQTYNTAPGLTFDT--QTSREYAQG 236
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Query: 253 PKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
PK+ YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVP C+K+TGKAVMLDEIINY
Sbjct: 18 PKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINY 77
Query: 312 VQSLQQQVEFLSMKLATVNPELNL 335
VQSLQ+Q+EFLSMKLA V+P L++
Sbjct: 78 VQSLQRQIEFLSMKLAAVDPRLDI 101
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 89/114 (78%), Gaps = 3/114 (2%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAER RREKISERM++LQ++VPGCNK+TGKA++LDEIINY+QS
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQS 196
Query: 315 LQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY 368
LQ+QVEFLSMKL VN +N + E SKD + T G + G ++R Y
Sbjct: 197 LQRQVEFLSMKLEAVNLNMNPETEVFPSKDFGQH---TFDTAGMAFGSQATREY 247
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 100/137 (72%), Gaps = 11/137 (8%)
Query: 213 SGILKEQDEKKQKIEQNTGANMR-GKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSH 270
SG E ++ + + E ++ AN + +Q++KP+ E PK +YIH+RA+RGQAT+SH
Sbjct: 43 SGSRSENNDSRAETEASSAANNKTAEQSSKPS-------EPPKQDYIHVRARRGQATDSH 95
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
SLAER RREKISERM +LQ+LVPGCNK+ GKA++LDEIINY+QSLQ QVEFLSMKL VN
Sbjct: 96 SLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQVEFLSMKLEAVN 155
Query: 331 PELNLD--IERILSKDI 345
+N E + KD+
Sbjct: 156 SRMNTSPTTEHLHPKDL 172
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 97/135 (71%), Gaps = 4/135 (2%)
Query: 238 QAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
++ K ++S + E PK+ YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCN
Sbjct: 25 RSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 84
Query: 297 KITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI 356
K+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN + IE KD + T
Sbjct: 85 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDYGQQ---TFDTT 141
Query: 357 GFSSGMNSSRPYPPG 371
G + G ++R Y G
Sbjct: 142 GVAFGSQATREYSRG 156
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query: 230 TGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLL 288
T A + A K S + E PK+ YIH+RA+RGQAT+SHSLAER RREKISERM++L
Sbjct: 94 TEAETDPRSAGKAVSKSLPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVL 153
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHA 348
Q+LVPGCNK+ GKA +LDEIINY+QSLQ QVEFLSMKL VN N +E KD
Sbjct: 154 QDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEAVNAHANQGVEAFPVKDYGAE 213
Query: 349 RSGSAATIGFSSGMNSSRPYPPG 371
+A + F + +SR Y G
Sbjct: 214 TYNTAPGLTFDT--QTSREYAQG 234
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 76/89 (85%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
YIH+RA+RGQAT+SH LAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSL
Sbjct: 148 YIHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVEFLSMKL VN LN IE KD
Sbjct: 208 QRQVEFLSMKLEAVNSRLNTGIEAFPPKD 236
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 97/135 (71%), Gaps = 4/135 (2%)
Query: 238 QAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN 296
++ K ++S + E PK +YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCN
Sbjct: 149 RSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 208
Query: 297 KITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI 356
K+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN + IE KD + T
Sbjct: 209 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDYGQQ---TFDTT 265
Query: 357 GFSSGMNSSRPYPPG 371
G + G ++R Y G
Sbjct: 266 GVAFGSQATREYSRG 280
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 93/119 (78%), Gaps = 8/119 (6%)
Query: 231 GANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQ 289
G+N +Q+ KP++ E PK +YIH+RA+RGQAT+SHS+AER RREKISERM++LQ
Sbjct: 95 GSNNSDEQSTKPSES-----EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQ 149
Query: 290 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD--IERILSKDIL 346
+LVPGCNK+ GKA++LDEIINY+QSLQ QVEFLSMKL VN N++ E SKD++
Sbjct: 150 DLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANMNPTNEGFPSKDVV 208
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 142 bits (359), Expect = 3e-31, Method: Composition-based stats.
Identities = 65/83 (78%), Positives = 80/83 (96%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC+KITGKAVML+EIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 314 SLQQQVEFLSMKLATVNPELNLD 336
SLQ+Q+EFLSMKLA V+P L+++
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLDIN 83
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 100/141 (70%), Gaps = 21/141 (14%)
Query: 216 LKEQDEKKQK----IEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHS 271
LK +EKK + + + + K+AA GE P YIH+RA+RGQAT+SHS
Sbjct: 141 LKGLEEKKARRVVLHQHDDDVKKKAKEAA--------GGEPPAGYIHVRARRGQATDSHS 192
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
LAERVRREKISERM++LQ LVPGC+K+TGKA+MLDEII+YVQSLQ QVEFLSMKLA+++P
Sbjct: 193 LAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLSP 252
Query: 332 ---------ELNLDIERILSK 343
+++ D+ R L+K
Sbjct: 253 LMYEFGPGIDMHPDVLRQLAK 273
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 83/91 (91%), Gaps = 3/91 (3%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
YIH+RA+RGQAT+SHSLAERVRREKISERM +LQ+LVPGC+K+TGKA++L+EIINYVQSL
Sbjct: 116 YIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSL 175
Query: 316 QQQVEFLSMKLATVNP---ELNLDIERILSK 343
Q QVEFLSMKLA+VNP ++ +D++ +L +
Sbjct: 176 QHQVEFLSMKLASVNPMLFDMAMDLDNLLVR 206
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 103/147 (70%), Gaps = 11/147 (7%)
Query: 196 TDKNVEVELQKDPSGDSSGILKEQDEKKQ----------KIEQNTGANMRGKQAAKPTKD 245
T ++E+ + K+ S ++S ++ ++K++ + G + K+ + TKD
Sbjct: 64 TISDIELSVVKNHSPETSMVVTRMEKKRRARNGSSSSDPLSKSTEGGKKKQKKPKEVTKD 123
Query: 246 SSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVM 304
+ E P YIH+RA+RGQAT+SHSLAERVRREKIS+RM LQ LVPGC+K+TGKA++
Sbjct: 124 KKIGAEDPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALV 183
Query: 305 LDEIINYVQSLQQQVEFLSMKLATVNP 331
LDEIINYVQSLQ QVEFLSMKLA+VNP
Sbjct: 184 LDEIINYVQSLQNQVEFLSMKLASVNP 210
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 87/100 (87%), Gaps = 5/100 (5%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC K+TGKAVMLDEIINYVQ
Sbjct: 383 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQ 442
Query: 314 SLQQQVEFLSMKLATVNP----ELNLDIERILSKDILHAR 349
SLQ+QVE LSMK+A+VNP L L+ R+ ++DI+ ++
Sbjct: 443 SLQRQVESLSMKVASVNPTHSGRLTLE-SRLSNEDIIQSQ 481
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 110/173 (63%), Gaps = 15/173 (8%)
Query: 216 LKEQDEKKQKIEQNTGANMRGK-QAAKPTKDSSLSGE--------APKEYIHMRAKRGQA 266
L + + K+ K +++G N + +A ++++S SG+ ++YIH+RA+RGQA
Sbjct: 84 LTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQA 143
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 326
T+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA +LDEIINY+Q+LQ+QVEFLSMKL
Sbjct: 144 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKL 203
Query: 327 ATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPS 379
VN +N IE KD A + G+ P QG+ PS
Sbjct: 204 EAVNAHVNNGIEAFPPKDF------GAQVYNTAPGLTFDPQTPREYAQGSTPS 250
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 110/172 (63%), Gaps = 15/172 (8%)
Query: 216 LKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGE--------APKEYIHMRAKRGQAT 267
L + + K+ K ++ +++R +A ++++S SG+ ++YIH+RA+RGQAT
Sbjct: 84 LTDSEAKRFKASKSDNSSLR-TEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQAT 142
Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 327
+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA +LDEIINY+Q+LQ+QVEFLSMKL
Sbjct: 143 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLE 202
Query: 328 TVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPS 379
VN +N IE KD A + G+ P QG+ PS
Sbjct: 203 AVNAHVNNGIEAFPPKDF------GAQVYNTAPGLTFDPQTPREYAQGSTPS 248
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 110/173 (63%), Gaps = 15/173 (8%)
Query: 216 LKEQDEKKQKIEQNTGANMRGK-QAAKPTKDSSLSGE--------APKEYIHMRAKRGQA 266
L + + K+ K +++G N + +A ++++S SG+ ++YIH+RA+RGQA
Sbjct: 84 LTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQA 143
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 326
T+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA +LDEIINY+Q+LQ+QVEFLSMKL
Sbjct: 144 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKL 203
Query: 327 ATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPS 379
VN +N IE KD A + G+ P QG+ PS
Sbjct: 204 EAVNAHVNNGIEAFPPKDF------GAQVYNTAPGLTFDPQTPREYAQGSTPS 250
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 85/103 (82%), Gaps = 5/103 (4%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT+SHSLAER RREKI++RM+LLQELVPGCNKI+G A++LDEIIN+VQSL
Sbjct: 174 YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSL 233
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
Q QVEFLSM+LA VNP ++ +++ +LS A SGS F
Sbjct: 234 QCQVEFLSMRLAAVNPRIDFNLDSMLS-----AESGSLIDSNF 271
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 79/91 (86%), Gaps = 4/91 (4%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
EAP YIH+RAKRGQA +SHSLAERVRREKISE+M LLQ LVPGC+K+TGKA+MLDEII+
Sbjct: 149 EAPAGYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIIS 208
Query: 311 YVQSLQQQVEFLSMKLATVNP----ELNLDI 337
YVQSLQ QVEFLSMKLA++NP E +DI
Sbjct: 209 YVQSLQNQVEFLSMKLASLNPMMMYEFGVDI 239
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 110/173 (63%), Gaps = 15/173 (8%)
Query: 216 LKEQDEKKQKIEQNTGANMRGK-QAAKPTKDSSLSGE--------APKEYIHMRAKRGQA 266
L + + K+ K +++G N + +A ++++S SG+ ++YIH+RA+RGQA
Sbjct: 43 LTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQA 102
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 326
T+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA +LDEIINY+Q+LQ+QVEFLSMKL
Sbjct: 103 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKL 162
Query: 327 ATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIFQGTMPS 379
VN +N IE KD A + G+ P QG+ PS
Sbjct: 163 EAVNAHVNNGIEAFPPKDF------GAQVYNTAPGLTFDPQTPREYAQGSTPS 209
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 99/141 (70%), Gaps = 13/141 (9%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAP--KEYIHMRAKRGQA 266
S D +G LK + + N +Q AKP+ S E P ++YIH+RA+RGQA
Sbjct: 57 SQDQNGALKAGEVDATSV----AGNKLPEQTAKPS-----SSEQPPKQDYIHVRARRGQA 107
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 326
T+SHSLAER RREKISERM++LQ++VPGCNK+ GKA++LDEIINY+QSLQ QVEFLSMKL
Sbjct: 108 TDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKL 167
Query: 327 ATVNPELNLD--IERILSKDI 345
VN L++ IE SK++
Sbjct: 168 EAVNSRLSMSPTIECFPSKEV 188
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 81/96 (84%), Gaps = 1/96 (1%)
Query: 251 EAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
E PK +YIH+RA+RGQAT+SHS+AER RREKISERM++LQ+LVPGCNK+ GKA +LDEII
Sbjct: 103 EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEII 162
Query: 310 NYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
NY+Q+LQ+QVEFLSMKL VN +N I SKD+
Sbjct: 163 NYIQALQRQVEFLSMKLEAVNAHVNNRIASFQSKDV 198
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 89/122 (72%), Gaps = 7/122 (5%)
Query: 225 KIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISE 283
K E T + +Q+ KP E PK +YIH+RA+RGQAT+SHSLAER RREKISE
Sbjct: 108 KGEGETSSGKLAEQSGKPPS------EPPKQDYIHVRARRGQATDSHSLAERARREKISE 161
Query: 284 RMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSK 343
RM++LQ++VPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN L IE K
Sbjct: 162 RMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLAPRIEVFPPK 221
Query: 344 DI 345
D
Sbjct: 222 DF 223
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 89/123 (72%), Gaps = 6/123 (4%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQAT+SHSLAER RREKI+ERM++LQ+LVPGCNK+ GKA +LDEIINYVQ
Sbjct: 109 QDYIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQ 168
Query: 314 SLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIF 373
+L++QVEFLSMKL VN +N +E SKD SA T + G+ P
Sbjct: 169 ALERQVEFLSMKLEAVNAHVNNGVETFPSKDF------SAPTFNTAPGLTFDPQTPREYA 222
Query: 374 QGT 376
QG+
Sbjct: 223 QGS 225
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 108/170 (63%), Gaps = 13/170 (7%)
Query: 170 CEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQN 229
EE+ + T G ++RA L + D++ ++ S S LKE +KK K+ +
Sbjct: 54 AEESTVTEQTGGGRKRRA-----LTSQDESSKMMFS---SCTSVNRLKESSKKKMKVCLS 105
Query: 230 TGANMRGKQAAKPTKDSSLSGEAP-----KEYIHMRAKRGQATNSHSLAERVRREKISER 284
G G + T S E K+YIH+RA+RGQAT+ HSLAER RREKISER
Sbjct: 106 EGETEDGLRREGETSSGGGSKETEEKSPLKDYIHVRARRGQATDRHSLAERARREKISER 165
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN 334
M+ LQ+L+PGCNKI GKA++LDEIINY+QSLQ+QVEFLSMKL VN +++
Sbjct: 166 MKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEIVNSDVS 215
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 85/111 (76%), Gaps = 7/111 (6%)
Query: 236 GKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
KQ+ KP E PK +YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPG
Sbjct: 110 AKQSGKP------PSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 163
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
CNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN + IE KD
Sbjct: 164 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIAPGIEVFPPKDF 214
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 98/136 (72%), Gaps = 9/136 (6%)
Query: 213 SGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAP-KEYIHMRAKRGQATNSHS 271
SG E ++ + +IE ++ AN KP + SS E P ++YIH+R++RGQAT+SHS
Sbjct: 102 SGSRNENNDSRAEIEASSAAN------NKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHS 155
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
LAER RRE+I ERM++LQ+LVPGCNK+ GKA+ LDEIINY+QSLQ QVEFLSMKL VN
Sbjct: 156 LAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVNS 215
Query: 332 ELNLD--IERILSKDI 345
++ IE + KD+
Sbjct: 216 RMSTSPAIEGLHPKDL 231
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 86/101 (85%), Gaps = 3/101 (2%)
Query: 239 AAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
+A +K++ + PK +YIH+RA+RGQAT+SHSLAER RREKIS++M+ LQ+LVPGCNK
Sbjct: 181 SADFSKENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNK 240
Query: 298 ITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN--PELNLD 336
ITG+A MLDEIINYVQSLQ+QVEFLSMKLA +N PE N+D
Sbjct: 241 ITGRAGMLDEIINYVQSLQRQVEFLSMKLAALNPRPEFNID 281
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 80/93 (86%), Gaps = 2/93 (2%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QS
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
Query: 315 LQQQVEFLSMKLATVNPELNLD--IERILSKDI 345
LQ QVEFLSMKL VN N++ I+ SKD+
Sbjct: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDV 179
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
Query: 253 PKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
PK+ +IH+RA+RGQATNSHSLAER RREKIS RM+ LQ LVPGC+++TGKAVML+EIINY
Sbjct: 12 PKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINY 71
Query: 312 VQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHAR 349
V+SLQ+Q+EFLSMKLA V+P L+ ++E +L ++ R
Sbjct: 72 VKSLQRQIEFLSMKLAAVDPRLDTNVEGLLKMEVCAVR 109
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 96/124 (77%), Gaps = 5/124 (4%)
Query: 213 SGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSL 272
SG E + K ++E ++ + K AA+ ++S +S ++YIH+RA+RGQAT+SHSL
Sbjct: 105 SGSQNENGKSKAEVEASSAND---KNAAE--QNSKISEPPKQDYIHVRARRGQATDSHSL 159
Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE 332
AER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN
Sbjct: 160 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 219
Query: 333 LNLD 336
+ ++
Sbjct: 220 MGMN 223
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 75/81 (92%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGC+K+TGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 315 LQQQVEFLSMKLATVNPELNL 335
LQ+QVEFLSMK+A NP ++
Sbjct: 202 LQKQVEFLSMKIAASNPVVSF 222
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 86/118 (72%), Gaps = 2/118 (1%)
Query: 230 TGANMRGKQAAKPTKDSSLS-GEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRL 287
+G R + KP + S E PK +YIH+RA+RGQAT+SHSLAER RREKISERM+
Sbjct: 102 SGEGGRENSSGKPAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKT 161
Query: 288 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+Q EFLSMKL VN + IE KD
Sbjct: 162 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQAEFLSMKLEAVNSRMESGIEVFPPKDF 219
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 111/167 (66%), Gaps = 15/167 (8%)
Query: 182 KTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAK 241
+ R+ +P S+S N ++L S D +G LK + + ++ G + +
Sbjct: 33 RKRRLSPSSDSA----SNKHIKLSAPESQDQNGALK--------VGEVDATSVAGNKLPQ 80
Query: 242 PTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
T S S +APK+ YIH+RA+RGQAT++HSLAER RREKISERM++LQ+LVPGCNK+ G
Sbjct: 81 QTPKPSSSEQAPKQDYIHVRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIG 140
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD--IERILSKDI 345
KA +LD IINYVQSLQ+QVEFLSMKL V+ L++ +E SK++
Sbjct: 141 KAFVLDGIINYVQSLQRQVEFLSMKLEAVSSRLSMKPTLECFPSKEV 187
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Query: 251 EAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
E PK +YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA +LDEII
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 310 NYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGF 358
NY+QSLQ QVEFLSMKL VN + I SKD +AA + F
Sbjct: 179 NYIQSLQHQVEFLSMKLEAVNSHMINGIVAFPSKDFGAQPYNTAAGLTF 227
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 97/131 (74%), Gaps = 11/131 (8%)
Query: 231 GANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQ 289
G+ + K A+ T S EA K Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQ
Sbjct: 173 GSTKKCKNASNET-----SEEAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQ 227
Query: 290 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHAR 349
ELVPGCNKI+G A++LDEII++VQSLQ+QVEFLSM+LA VNP ++ +++ +L+ +
Sbjct: 228 ELVPGCNKISGTALVLDEIISHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLLAPE----- 282
Query: 350 SGSAATIGFSS 360
SGS F S
Sbjct: 283 SGSLVDSNFPS 293
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 98/141 (69%), Gaps = 13/141 (9%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAP--KEYIHMRAKRGQA 266
S D +G LK + + N +Q AKP+ S E P ++YIH+RA+RGQA
Sbjct: 57 SQDQNGALKAGEVDATSV----AGNKLPEQTAKPS-----SSEQPPKQDYIHVRARRGQA 107
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 326
T+SHSLAER RREKISERM++LQ++VPGCNK+ GKA++LDEIINY+QSLQ QVEFL MKL
Sbjct: 108 TDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFMKL 167
Query: 327 ATVNPELNLD--IERILSKDI 345
VN L++ IE SK++
Sbjct: 168 EAVNSRLSMSPIIECFPSKEV 188
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 79/89 (88%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+R +RGQAT+SHSLAER RREKI+ RM+LLQELVPGC KI+G A++LDEIIN+VQ+L
Sbjct: 170 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTL 229
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVE LSMKLA VNP ++ +++R+L+ D
Sbjct: 230 QRQVEILSMKLAAVNPRIDFNLDRLLAAD 258
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 90/115 (78%), Gaps = 6/115 (5%)
Query: 231 GANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQ 289
G++ + K AA T SG+ K Y+H+R +RGQAT+SHSLAER RREKI+ RM+LLQ
Sbjct: 176 GSSKKRKSAADET-----SGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQ 230
Query: 290 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
ELVPGC+KI+G A++LDEIIN+VQSLQ+QVE LSMKLA VNP ++ ++ +L+ D
Sbjct: 231 ELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRIDFSLDSLLATD 285
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 74/80 (92%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAER RREKISERM++LQ++VPGCNK+ GKA +LDEIINY+QS
Sbjct: 46 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 105
Query: 315 LQQQVEFLSMKLATVNPELN 334
LQ+QVEFLSMKL T+N +N
Sbjct: 106 LQRQVEFLSMKLETINAHMN 125
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 80/90 (88%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT+SHSLAER RREKI++RM+LLQELVPGCNKI+G A++LDEIIN+VQ L
Sbjct: 179 YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFL 238
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKDI 345
Q+QVE LSM+LA VNP ++ +++ +LS +
Sbjct: 239 QRQVEILSMRLAAVNPRIDFNLDSMLSAEF 268
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 79/89 (88%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQELVPGC+KI G A++LDEIIN+VQSL
Sbjct: 197 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 256
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVE LSM+LA VNP ++ +++ IL+ +
Sbjct: 257 QRQVEMLSMRLAAVNPRIDFNLDTILASE 285
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 235 RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
+ K A T +SS GE Y+H+R +RGQAT+SHSLAER RREKI+ RM+LLQELVPG
Sbjct: 169 KSKSVAAATDESSGDGEK-LPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPG 227
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
CNKI+G A++LD+IIN+VQSLQ +VE LSMKLA VNP ++ +++ +L+ +
Sbjct: 228 CNKISGTALVLDKIINHVQSLQNEVEILSMKLAAVNPVIDFNLDSLLATE 277
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Query: 239 AAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
+A +K++ + PK +YIH+RA+RGQAT+SHSLAER RREKIS++M+ LQ+LVPGCNK
Sbjct: 16 SADSSKENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNK 75
Query: 298 ITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
ITG+A MLDEIINYVQSLQ+QVEF+SMKLA VN
Sbjct: 76 ITGRAGMLDEIINYVQSLQRQVEFISMKLAAVN 108
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 79/89 (88%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQELVPGC+KI G A++LDEIIN+VQSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVE LSM+LA VNP ++ +++ IL+ +
Sbjct: 261 QRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 90/117 (76%), Gaps = 6/117 (5%)
Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVR 277
E+++++ + E N+G A+K E PK+YIH+RA+RGQAT+SHSLAER R
Sbjct: 88 EKNDRRTEAETNSG------NASKSADKKPAPKEPPKDYIHVRARRGQATDSHSLAERAR 141
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN 334
REKISERM++LQ++VPGCNK+ GKA +LDEIINY+QSLQ+QVEFLSMKL +N ++
Sbjct: 142 REKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLEAINAHVS 198
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 79/89 (88%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQELVPGC+KI G A++LDEIIN+VQSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVE LSM+LA VNP ++ +++ IL+ +
Sbjct: 261 QRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 78/89 (87%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+R +RGQAT+SHSLAER RREKI+ RM+LLQELVPGC+KI+G A++LDEIIN+VQSL
Sbjct: 203 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 262
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVE LSMKLA VNP ++ ++ +L+ D
Sbjct: 263 QRQVEILSMKLAAVNPRIDFSLDSLLATD 291
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 82/96 (85%), Gaps = 1/96 (1%)
Query: 253 PKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
PK+ +IH+RA+RGQAT+ HSLAER RREKIS RM+ LQ LVPGC+++TGKAVML+EIINY
Sbjct: 143 PKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINY 202
Query: 312 VQSLQQQVEFLSMKLATVNPELNLDIERILSKDILH 347
V+SLQ+Q+EFLSMKLA V+P ++ ++E +L + H
Sbjct: 203 VKSLQRQIEFLSMKLAAVDPRVDTNVEGLLKMEAEH 238
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 82/103 (79%), Gaps = 2/103 (1%)
Query: 230 TGANMRGKQ--AAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRL 287
T N +G++ + K +++S K+YIH+RA+RGQAT+SHSLAER RREKISERM+
Sbjct: 81 TSGNSKGEENSSGKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKISERMKT 140
Query: 288 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
LQ+LVPGCNK+ GKA++LDEIINY+QSL QVEFLSMKL VN
Sbjct: 141 LQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVN 183
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 90/123 (73%), Gaps = 5/123 (4%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+Y+H+RA+RG+AT+SHSLAER RREKISERM+ LQ LVPGCNKI GKA MLDEIINYVQS
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 315 LQQQVEFLSMKLATVNPELN-LDIERILSKD----ILHARSGSAATIGFSSGMNSSRPYP 369
LQQQVEFLSMK+A +N ++ ++++ +L+K I RS +G + + P
Sbjct: 62 LQQQVEFLSMKVAALNHRVDFINVDDLLAKQMFPTITDNRSSYDTQLGIMGSSSLTIPQT 121
Query: 370 PGI 372
P I
Sbjct: 122 PLI 124
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 78/88 (88%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
++ K+YIH+R++RGQATNSHSLAERVRREKISERM++LQ+LVPGCNK+TGKA++L+ IIN
Sbjct: 104 KSQKDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIIN 163
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIE 338
YVQSLQ QVE LS+KL +V + D++
Sbjct: 164 YVQSLQSQVEILSVKLTSVLSRCHFDLQ 191
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 72/80 (90%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQAT+ HSLAER RREKISE+M LQ+++PGCNKI GKA++LDEIIN
Sbjct: 145 EPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIIN 204
Query: 311 YVQSLQQQVEFLSMKLATVN 330
Y+QSLQ+QVEFLSMKL VN
Sbjct: 205 YIQSLQRQVEFLSMKLEVVN 224
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 72/80 (90%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQAT+ HSLAER RREKISE+M LQ+++PGCNKI GKA++LDEIIN
Sbjct: 146 EPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIIN 205
Query: 311 YVQSLQQQVEFLSMKLATVN 330
Y+QSLQ+QVEFLSMKL VN
Sbjct: 206 YIQSLQRQVEFLSMKLEVVN 225
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
+K S +G+ P Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LL+ELVPGC+KI G A
Sbjct: 19 SKSSEENGKLP--YVHVRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTA 76
Query: 303 VMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
++LDEIIN+VQSLQ+QVE LSM+LA VNP ++ +++ +L+ ++
Sbjct: 77 LVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTLLASEV 119
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 79/89 (88%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT++HSLAER RREKI+ RM+LLQELVPGC+KI G A++LDEIIN+VQ+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTL 241
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVE LSM+LA VNP ++ +++ IL+ +
Sbjct: 242 QRQVEMLSMRLAAVNPRIDFNLDSILASE 270
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 78/89 (87%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+R +RGQAT+SHSLAER RREKI+ RM+LLQELVPGCNKI+G A++LD+IIN+VQSL
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q +VE LSMKLA VNP ++ +++ IL+ +
Sbjct: 217 QHEVEILSMKLAAVNPIIDFNLDSILAAE 245
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 78/89 (87%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT++HSLAER RREKI+ RM+LLQELVPGC+KI G A++LDEIIN+VQSL
Sbjct: 181 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 240
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVE LSM+LA VNP + +++ IL+ +
Sbjct: 241 QRQVEMLSMRLAAVNPRVEFNLDSILASE 269
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 82/96 (85%), Gaps = 1/96 (1%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQELVPGC+KI+G A++LDEIIN+VQSL
Sbjct: 4 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSL 63
Query: 316 QQQVEFLSMKLATVNPELNLD-IERILSKDILHARS 350
Q++VEFLSM+LA VNP ++ ++ ILS + H S
Sbjct: 64 QREVEFLSMRLAAVNPRIDFSGLDSILSSECGHLTS 99
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 96/147 (65%), Gaps = 24/147 (16%)
Query: 231 GANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERV------------- 276
G+N +Q+ KP++ E PK +YIH+RA+RGQAT+SHS+AERV
Sbjct: 100 GSNNSDEQSTKPSES-----EPPKQDYIHVRARRGQATDSHSIAERVIHFSLCLSISYLL 154
Query: 277 ---RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ QVEFLSMKL VN
Sbjct: 155 LVARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRA 214
Query: 334 NLD--IERILSKDILHARSGSAATIGF 358
NL+ E SKD R +G+
Sbjct: 215 NLNPTNEGFPSKDFQRTRCTWMRLLGW 241
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 248 LSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLD 306
+SG+ K Y+H+R +RGQAT+SHSLAER RREKI+ RM+LLQELVPGCNKI+G A++LD
Sbjct: 176 ISGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLD 235
Query: 307 EIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
+IIN+VQSLQ +VE LSMKLA VNP ++ +++ +L+ +
Sbjct: 236 KIINHVQSLQNEVEILSMKLAAVNPVIDFNLDSLLATE 273
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 78/89 (87%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT++HSLAER RREKI+ RM+LLQELVPGC+KI G ++LDEIIN+VQ+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTL 241
Query: 316 QQQVEFLSMKLATVNPELNLDIERILSKD 344
Q+QVE LSM+LA VNP ++ +++ IL+ +
Sbjct: 242 QRQVEMLSMRLAAVNPRIDFNLDSILASE 270
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 116/207 (56%), Gaps = 26/207 (12%)
Query: 239 AAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
A + +KD+ + Y+H+RA+RGQAT+SHSLAER RREKI+ RM LL+ELVPGC+K+
Sbjct: 60 ADRASKDAGGGEDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKV 119
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL-DIERILSKDILHARSGSAATIG 357
+G A++LDEIIN+VQSLQ+QVE+LSM+LA VNP ++ ++ L+ + G +
Sbjct: 120 SGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTSEC-----GRITGLN 174
Query: 358 FSSGMNSSRPYPPGI----------FQGTMPSIPGANPQFPPLPQS--------VLDHEF 399
SGM+ + P + Q A+P PP V H
Sbjct: 175 CKSGMDLEQVTWPDMGVHGARHLMQLQQQFWHGDLAHPHQPPSQWEKRGDVNPPVFSHSS 234
Query: 400 QSLFQMGYDSTSAVDSLGPNGRLKSEL 426
SLF GYD S+ +LK+EL
Sbjct: 235 SSLF--GYDLASSGQQQPQPNKLKTEL 259
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 71/81 (87%)
Query: 250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
E PK+YIH+RA+RGQAT+SHSLAERVRREKI ERM+LLQ+LVPGC+K+TGKAVMLDEII
Sbjct: 247 AEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEII 306
Query: 310 NYVQSLQQQVEFLSMKLATVN 330
NYVQSLQ+QVE + L +
Sbjct: 307 NYVQSLQRQVEVRRVCLLCIG 327
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/77 (80%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Query: 247 SLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLD 306
S + E P +YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TGKA MLD
Sbjct: 118 SKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLD 176
Query: 307 EIINYVQSLQQQVEFLS 323
EIINYVQSLQ+QVEFLS
Sbjct: 177 EIINYVQSLQRQVEFLS 193
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 92/141 (65%), Gaps = 10/141 (7%)
Query: 235 RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
RGK+A K + E P+E +H+RA+RGQAT+SHSLAERVRR KI+ER+R LQ++VPG
Sbjct: 126 RGKRAMKSIEKED---EKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 182
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP--ELNLDIERI--LSKDILHAR- 349
C K G AVMLDEIINYVQSLQ QVEFLSMKL + + N D + + + + +H
Sbjct: 183 CYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASQYYDFNSDTDTLETIQRGKVHGEQ 242
Query: 350 --SGSAATIGFSSGMNSSRPY 368
S I + G SS PY
Sbjct: 243 PPSTQHGPIDLTFGSYSSLPY 263
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 81/98 (82%), Gaps = 8/98 (8%)
Query: 256 YIHMRAKRGQATNSHSLAERV--------RREKISERMRLLQELVPGCNKITGKAVMLDE 307
Y+H+RA+RGQAT++HSLAERV RREKI+ RM+LLQELVPGC+KI G A++LDE
Sbjct: 126 YVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDE 185
Query: 308 IINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDI 345
IIN+VQ+LQ+QVE LSM+LA VNP ++ +++ IL+ ++
Sbjct: 186 IINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASEV 223
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 85/107 (79%), Gaps = 7/107 (6%)
Query: 235 RGKQAAK-PTKDSSLSG-----EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLL 288
+GK A K T + L+G E P Y+H+RA+RGQAT+SHSLAER RREKI+ RM LL
Sbjct: 164 QGKAAKKGKTAEEKLAGGDGDDEKPA-YVHVRARRGQATDSHSLAERARREKINARMELL 222
Query: 289 QELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
+ELVPGC+K++G A++LDEIIN+VQSLQ+QVE+LSM+LA VNP ++
Sbjct: 223 KELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 269
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 73/80 (91%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT+SHSLAER RREKI+ RM LL+ELVPGC+K++G A++LDEIIN+VQSL
Sbjct: 177 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 236
Query: 316 QQQVEFLSMKLATVNPELNL 335
Q+QVE+LSM+LA VNP ++
Sbjct: 237 QRQVEYLSMRLAAVNPRVDF 256
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 99/175 (56%), Gaps = 47/175 (26%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERV------------------------ 276
KP ++S + ++ ++YIH+RA+RGQAT+SHSLAERV
Sbjct: 139 KPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQMPKLKRIG 198
Query: 277 --------------------RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ
Sbjct: 199 LSWNSRSRCRCIGVSVYINARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 258
Query: 317 QQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPYPPG 371
+QVEFLSMKL VN +N +E KD+ +AA I G ++R Y G
Sbjct: 259 RQVEFLSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAAAMI---YGSQATREYAQG 310
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 83/121 (68%), Gaps = 13/121 (10%)
Query: 251 EAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
E PK +YIH+RA+RGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA +LDEII
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 310 NYVQSLQQQVE------------FLSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
NY+QSLQ QVE FLSMKL VN + I SKD +AA +
Sbjct: 179 NYIQSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMINGIVAFPSKDFGAQPYNTAAGLT 238
Query: 358 F 358
F
Sbjct: 239 F 239
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
Query: 244 KDSSLSGEAPK-EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
K ++ GE K Y+H+RA+RGQAT+SHSLAER RREKI+ RM LL+ELVPGC+K++G A
Sbjct: 141 KPAAAGGEDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTA 200
Query: 303 VMLDEIINYVQSLQQQVEFLSMKLATVNP 331
++LDEIIN+VQSLQ+QVE+LSM+LATVNP
Sbjct: 201 LVLDEIINHVQSLQRQVEYLSMRLATVNP 229
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 85/123 (69%), Gaps = 4/123 (3%)
Query: 235 RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
RGK+ K +S+ + P E +H+RAKRGQAT+SHSLAERVRR KI+E++R LQ +VPG
Sbjct: 113 RGKR----VKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPG 168
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAA 354
C K G A+MLDEIINYVQSLQ QVEFLSMKL + +L+ E + + AR+
Sbjct: 169 CYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLNSESDALETMQRARASEVK 228
Query: 355 TIG 357
+G
Sbjct: 229 ELG 231
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 112/178 (62%), Gaps = 10/178 (5%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK--ITGKAVMLDEIINYVQ 313
Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQELVPGC+K I+G A++LD+IIN+VQ
Sbjct: 29 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQ 88
Query: 314 SLQQQVEFLSMKLATVNPELNLD-IERILSKDILHARSGSAATIGFSSGMNSSRPYPPGI 372
SLQ+QVEFLSM+LA V P ++ ++ ILS + R S+ IG + + G+
Sbjct: 89 SLQRQVEFLSMRLAAVTPRIDFSGLDNILSSEC--GRLTSSNRIGMGTVAMEQSTWLDGM 146
Query: 373 FQGT---MPSIPGANPQFPPL-PQSVLDHEFQSLFQMGYDSTSAVDSLGPNGRLKSEL 426
G I +PQ + + VL + GYDS++ PN +LK+EL
Sbjct: 147 INGCKQQQQQIWLVDPQQQQIWERDVLVSNPVTTSIYGYDSSNPSSVSLPN-QLKTEL 203
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Query: 233 NMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELV 292
N GK+ D++ GE P+E +H+RA+RGQAT+SHS+AER+RR KI+ER+R LQ++V
Sbjct: 128 NNNGKEKRSKKGDTN-DGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIV 186
Query: 293 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 329
PGC K G AVMLDEIINYVQSLQ QVEFLSMKL
Sbjct: 187 PGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAA 223
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 139/289 (48%), Gaps = 64/289 (22%)
Query: 71 SMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGL 130
SM N+F LEN +S+ NL +S D P+ PG NF +V+ L
Sbjct: 28 SMELLNQFIGMNQHVLENSNLSTMHNLVPFSCDTFLGPQEPEFPGNLEENFPALVNHNAL 87
Query: 131 PENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRA--P 188
P + I + +++I E GK RK P
Sbjct: 88 PVSLPIFQA--------------------------ENEIHE---------GKKRKSVDLP 112
Query: 189 ESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSL 248
E++S +T P+ SG KI+ ++G RGK+ K +
Sbjct: 113 ETSSANST-----------PAVSESG---------SKIKHSSG---RGKR----VKSNVT 145
Query: 249 SGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
E KE +H+RA+RGQAT+SHSLAERVRR KI+E++R LQ +VPGC K G AVMLDEI
Sbjct: 146 EEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEI 205
Query: 309 INYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
INYVQSLQ QVEFLS+KL + + + E + + AR+ A +G
Sbjct: 206 INYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRARASEAKELG 254
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 73/80 (91%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT+SHSLAER RREKI+ RM LL+ELVPGC+K++G A++LDEIIN+VQSL
Sbjct: 143 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 202
Query: 316 QQQVEFLSMKLATVNPELNL 335
Q+QVE+LSM+LA VNP ++
Sbjct: 203 QRQVEYLSMRLAAVNPRVDF 222
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 84/111 (75%), Gaps = 10/111 (9%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
Y+H+RA+RGQAT+SHSLAER RREKI+ RM LL+ELVPGC+K++G A++LDEIIN+VQSL
Sbjct: 104 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 163
Query: 316 QQQVEFLSMKLATVNPELN---LDIERILSKDILHARSGSAATIGFSSGMN 363
Q+QVE+LSM+LA VNP ++ LD + L G + + +GM+
Sbjct: 164 QRQVEYLSMRLAAVNPRVDFGGLD-------NFLTTECGRITGLNYKNGMD 207
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 5/122 (4%)
Query: 235 RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
RGK+ D E PKE +H+RA+RGQAT+SHSLAERVRR KI+ER+R LQ++VPG
Sbjct: 54 RGKRTKSKEDD-----EKPKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 108
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAA 354
C K G AVMLDEIINYVQSLQ QVEFLSMKL + + + E + + A++ A
Sbjct: 109 CYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSETDAIETMQRAKAQEAK 168
Query: 355 TI 356
I
Sbjct: 169 EI 170
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 79/98 (80%), Gaps = 5/98 (5%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P ++H+RA+RG+AT+SHSLAER RREKISERM+LLQ LVPGC+KI GK ++LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 313 QSLQQQVEFLSMKLATVNP-----ELNLDIERILSKDI 345
+SLQ QVEFL KLA+++P E NLD + S+++
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSNTLQSENL 199
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 79/98 (80%), Gaps = 5/98 (5%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P ++H+RA+RG+AT+SHSLAER RREKISERM+LLQ LVPGC+K+ GK ++LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYV 161
Query: 313 QSLQQQVEFLSMKLATVNP-----ELNLDIERILSKDI 345
+SLQ QVEFL KLA+++P E NLD + S+++
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSSTLQSENL 199
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 6/111 (5%)
Query: 228 QNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRL 287
+N ++ RGK K +D PK+ +H+RA+RGQAT+SHSLAERVRR KI+ER+R
Sbjct: 131 RNVNSSRRGK-GVKSNEDGK-----PKDVVHVRARRGQATDSHSLAERVRRGKINERLRC 184
Query: 288 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE 338
LQ++VPGC K G AVMLDEIINYVQSLQ QVEFLSMKL + + + E
Sbjct: 185 LQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNAE 235
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 78/98 (79%), Gaps = 5/98 (5%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P ++H+RA+RG+AT+SHSLAER RREKISERM+ LQ LVPGC+KI GK ++LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 313 QSLQQQVEFLSMKLATVNP-----ELNLDIERILSKDI 345
+SLQ QVEFL KLA+++P E NLD + S+++
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSSTLQSENL 199
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 90/137 (65%), Gaps = 7/137 (5%)
Query: 221 EKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREK 280
E KI+ ++G RGK+ K + E KE +H+RA+RGQAT+SHSLAERVRR K
Sbjct: 124 ESGSKIKHSSG---RGKR----VKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGK 176
Query: 281 ISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERI 340
I+E++R LQ +VPGC K G AVMLDEIINYVQSLQ QVEFLS+KL + + + E
Sbjct: 177 INEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETD 236
Query: 341 LSKDILHARSGSAATIG 357
+ + AR+ A +G
Sbjct: 237 ALETMQRARASEAKELG 253
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 67/77 (87%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+E IH+RAKRGQAT+SHSLAERVRREKI+E++R LQ+LVPGC K G AVMLD IINYV
Sbjct: 134 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 193
Query: 313 QSLQQQVEFLSMKLATV 329
QSLQ Q+EFLSMKL+
Sbjct: 194 QSLQNQIEFLSMKLSAA 210
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 67/77 (87%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+E IH+RAKRGQAT+SHSLAERVRREKI+E++R LQ+LVPGC K G AVMLD IINYV
Sbjct: 117 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 176
Query: 313 QSLQQQVEFLSMKLATV 329
QSLQ Q+EFLSMKL+
Sbjct: 177 QSLQNQIEFLSMKLSAA 193
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 73/89 (82%), Gaps = 5/89 (5%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P ++H+RA+RG+AT+SHSLAER RREKISERM+ LQ LVPGC+KI GK ++LDEIINYV
Sbjct: 36 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 95
Query: 313 QSLQQQVEFLSMKLATVNP-----ELNLD 336
+SLQ QVEFL KLA+++P E NLD
Sbjct: 96 KSLQNQVEFLVGKLASISPMLIGHEANLD 124
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 67/75 (89%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+E IH+RAKRGQAT+SHSLAERVRREKI+E++R LQ+LVPGC K G AVMLD IINYV
Sbjct: 113 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 172
Query: 313 QSLQQQVEFLSMKLA 327
QSLQ Q+EFLSMKL+
Sbjct: 173 QSLQNQIEFLSMKLS 187
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 138/277 (49%), Gaps = 64/277 (23%)
Query: 70 SSMVSHNEFAP-SYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSF 128
+SM + N+F + + L+N M++ + ++S+ F P+ PG +G+F
Sbjct: 22 ASMAAINQFTEVNQAIQLDNPIMNNFHSFTPFTSNNFFSHQAPEFPGNFAGSF------- 74
Query: 129 GLPENAQIASSGCPPNYVPNKEGCYERNSRNV---SQSYEDHQICEEAAIGVATNGKTRK 185
LP G + +N +NV SQ++
Sbjct: 75 -LP-------------------GSFHQNDQNVMPVSQTFT-------------------- 94
Query: 186 RAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKD 245
P S K +++ + +S + E KK+K ++ RGK+ K
Sbjct: 95 -IPAKESEFQESKRRAMDVSESSCMNSYPRVSESGSKKRK------SSRRGKR----VKS 143
Query: 246 SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
+ E +E +H+RA+RGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K G AVML
Sbjct: 144 NEEEEEKTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVML 203
Query: 306 DEIINYVQSLQQQVEFLSMKL--ATVNPELNLDIERI 340
DEIINYVQSLQ QVEFLSMKL A+ + N + E I
Sbjct: 204 DEIINYVQSLQNQVEFLSMKLTAASTFYDFNAETEAI 240
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 76/106 (71%), Gaps = 12/106 (11%)
Query: 227 EQNTGANMRGKQAAKPTKDSSLSG------------EAPKEYIHMRAKRGQATNSHSLAE 274
EQN+G N K+ + + + P++YIH+RA++GQAT+SHSL E
Sbjct: 88 EQNSGVNFDLKELVGIVQKRCWASMFVSDIQNKANSKPPEDYIHVRARKGQATDSHSLVE 147
Query: 275 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
RVRREKISERM+LLQ LVPGCNK+TGKA MLDEIINYVQSLQ+QVE
Sbjct: 148 RVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQRQVE 193
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 80/116 (68%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
K K + + + P E +H+RAKRGQAT+SHSLAERVRR KI+E++R LQ +VPGC K G
Sbjct: 109 KRVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMG 168
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATI 356
A+MLDEIINYVQSLQ QVEFLSMKL + + + E + + + AR+ +
Sbjct: 169 MAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDFNSESDVLETMQRARASEVKEL 224
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 88/133 (66%), Gaps = 7/133 (5%)
Query: 207 DPSGDSSGILKEQ-DEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQ 265
D S +SGI Q E + ++G R K K + S+ +E +H+RA+RGQ
Sbjct: 101 DVSESTSGISTPQVSESGFNTKYSSGKGKRLKSLEKEEEKST------REVVHVRARRGQ 154
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
AT+SHSLAERVRR KI+ER+R L+++VPGC K G AVMLDEIINYVQSLQ QVEFLSMK
Sbjct: 155 ATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMK 214
Query: 326 LATVNPELNLDIE 338
LA + + + E
Sbjct: 215 LAAASSFYDFNSE 227
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 64/67 (95%)
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+YIH+RA+RGQAT+SHSLAERVRRE+ISERMR LQELVPGC+K+TGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 315 LQQQVEF 321
LQ+QVE
Sbjct: 202 LQKQVEV 208
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
+ PK+ +H+RAKRGQAT+SHSLAERVRREKI+ER++ LQ+LVPGC K G AVMLD II+
Sbjct: 96 QKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIID 155
Query: 311 YVQSLQQQVEFLSMKL--ATVNPELN-LDIE 338
YV+SLQ Q+EFLSMKL A+ +LN LDIE
Sbjct: 156 YVRSLQNQIEFLSMKLSAASACYDLNSLDIE 186
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
+ PK+ +H+RAKRGQAT+SHSLAERVRREKI+ER++ LQ+LVPGC K G AVMLD II+
Sbjct: 96 QKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIID 155
Query: 311 YVQSLQQQVEFLSMKL--ATVNPELN-LDIE 338
YV+SLQ Q+EFLSMKL A+ +LN LDIE
Sbjct: 156 YVRSLQNQIEFLSMKLSAASACYDLNSLDIE 186
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
+ PK+ +H+RAKRGQAT+SHSLAERVRREKI+ER++ LQ+LVPGC K G AVMLD II+
Sbjct: 39 QKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIID 98
Query: 311 YVQSLQQQVEFLSMKL--ATVNPELN-LDIE 338
YV+SLQ Q+EFLSMKL A+ +LN LDIE
Sbjct: 99 YVRSLQNQIEFLSMKLSAASACYDLNSLDIE 129
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 77/107 (71%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E +E +H+RA+RGQAT+SHS+AERVRR KI+ER++ LQ++VPGC K G A MLDEIIN
Sbjct: 141 EKDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIIN 200
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
YVQSLQ QVEFLSMKL + + + E + + A++ A +G
Sbjct: 201 YVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQRAKAREAVEMG 247
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 71/97 (73%), Gaps = 17/97 (17%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E K+YIH VRRE+ISERM+LLQ LVPGCNKITGKA+MLDEIIN
Sbjct: 196 EPAKDYIH-----------------VRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 238
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILH 347
YVQSLQ+QVEFLSMKLAT+NP+L+ D + SKD+ H
Sbjct: 239 YVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSH 275
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 94/137 (68%), Gaps = 11/137 (8%)
Query: 235 RGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
R ++ K K+ L+G Y+H+RA+RG+AT+ HSLAERVRR+KIS RM+LLQ LVPG
Sbjct: 145 RARKEKKVAKEHPLTG-----YVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPG 199
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN---PELNLDIERILSKDILHA--- 348
C+K+TGKA +LDEII +V SLQ QVEFL+ K + N E+N ++ +++K++ ++
Sbjct: 200 CDKLTGKAQILDEIIRHVLSLQNQVEFLAAKFTSENGIANEVNYEMNTLVAKELYNSELQ 259
Query: 349 RSGSAATIGFSSGMNSS 365
S SA I F ++S
Sbjct: 260 ESSSAQLISFMEATSAS 276
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 81/112 (72%), Gaps = 7/112 (6%)
Query: 225 KIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISER 284
K + N G + +G+ K G+ +E IH+RAKRGQAT+SHS+AERVRREKI+ +
Sbjct: 121 KKKNNLGGSKKGENKEKE-------GDKAEEVIHVRAKRGQATDSHSIAERVRREKINNK 173
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD 336
+R LQ+LVPGC++ G AVML+EIINYV SLQ QVEFLSM+LA + +L+
Sbjct: 174 LRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASSSNDLN 225
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 72/87 (82%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
IH+RAKRGQAT+SHS+AERVRREKI+ ++R LQ+LVPGC+K G AVML+EIINYV SLQ
Sbjct: 147 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQ 206
Query: 317 QQVEFLSMKLATVNPELNLDIERILSK 343
QVEFLSM+LA + +L++E SK
Sbjct: 207 NQVEFLSMELAAASCSYDLNLETESSK 233
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 95/157 (60%), Gaps = 24/157 (15%)
Query: 198 KNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI 257
K + +L D +GD +D K + G N +GK D++ GE PK+YI
Sbjct: 227 KAKKCKLSADAAGD-------EDTKPVAGDAGHGGNGKGK-----VLDAA--GEPPKDYI 272
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMR--LLQELVPGCNKI--------TGKAVMLDE 307
H+RA+RGQAT+SHSLAERV + + + ++ + I TGKAVMLDE
Sbjct: 273 HVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQVTGKAVMLDE 332
Query: 308 IINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
IINYVQSLQ+QVEFLSMKL+TVNP+L+ D++ + KD
Sbjct: 333 IINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKD 369
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 80/110 (72%)
Query: 212 SSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHS 271
S I +++ K+QK+ N+ + K+ K + E P Y+H+RA+RG+AT+SHS
Sbjct: 114 SPAIKVKRESKRQKLNLNSSVSRNAKRVRPAKKQKKVPVEPPTGYVHVRARRGEATDSHS 173
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
LAERVRREKIS RM+LLQ LVPGC+KITGKA++LDEII+YVQ L+ +V+
Sbjct: 174 LAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFLKDRVQV 223
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 121 bits (304), Expect = 6e-25, Method: Composition-based stats.
Identities = 55/67 (82%), Positives = 64/67 (95%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
++YIH+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC K+TGKAVMLDEIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 314 SLQQQVE 320
LQ+QVE
Sbjct: 61 FLQRQVE 67
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 69/83 (83%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PK+YIH+RA+RGQ +SH AERVRREKISE + LLQ+LVP ++ITGKA LDEIIN
Sbjct: 13 EPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADSLDEIIN 72
Query: 311 YVQSLQQQVEFLSMKLATVNPEL 333
YVQSL++QVE L MKLAT+NP +
Sbjct: 73 YVQSLKRQVELLYMKLATINPRM 95
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 100/170 (58%), Gaps = 30/170 (17%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
M+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+L+IE +L+KD
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKD 60
Query: 345 ILHARSGSAATIGFSSGMNSSRPYPP------GIFQGTMPSIPG--------ANPQFPPL 390
IL + +++ FS M + YPP G+ P + N Q P+
Sbjct: 61 ILQLHAVPPSSLAFSLEMPMA--YPPSHPSQAGLIPTAFPGMNNHSDIICRTINSQLTPM 118
Query: 391 PQ---------SVLDHEFQSLFQMGYDSTSAVDSLG-----PNGRLKSEL 426
+V D E +++ QM Y++++ DS P G LK EL
Sbjct: 119 TAGFKEPAQLPNVWDDELRNVVQMSYETSAPHDSQDVNKPLPPGHLKVEL 168
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 66/74 (89%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
KE IH+RAKRGQAT+SHS+AER+RREKI+ ++R LQ++VPGC+K G AVML+EIINYV
Sbjct: 153 KEVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVH 212
Query: 314 SLQQQVEFLSMKLA 327
SLQ QVEFLSM+LA
Sbjct: 213 SLQNQVEFLSMELA 226
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+H+RA+RGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K G A MLDEIINYVQSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 317 QQVEFLSMKLA 327
QVEFLSMKL
Sbjct: 203 NQVEFLSMKLT 213
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 100/156 (64%), Gaps = 10/156 (6%)
Query: 202 VELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRA 261
+++Q+ S +S+ + E +I+ N+G RGK+A K + E KE +H+RA
Sbjct: 110 MDIQETSSANSTPAVSESG---SRIKNNSG---RGKRA----KSNVTEEEKEKEVVHVRA 159
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+RGQAT+SHSLAERVRR KI+E++R LQ +VPGC K G AVMLDEIINYVQSLQ QVEF
Sbjct: 160 RRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEF 219
Query: 322 LSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
LS+KL + + + E + + AR+ A +
Sbjct: 220 LSLKLTAASTYYDFNSETDAIETMQRARASEAKELA 255
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 79/106 (74%), Gaps = 10/106 (9%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+RGQAT+SHSLAER RREKI+ RM LL+ELVPGC+K++G A++LDEIIN+VQSLQ+QVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 321 FLSMKLATVNPELN---LDIERILSKDILHARSGSAATIGFSSGMN 363
+LSM+LA VNP ++ LD + L G + + +GM+
Sbjct: 61 YLSMRLAAVNPRVDFGGLD-------NFLTTECGRITGLNYKNGMD 99
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 73/100 (73%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H+RA+RGQAT+SHS+AERVRR KI+ER++ LQ++VPGC K G A MLDEIINYVQSLQ
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 318 QVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
QVEFLSMKL + + + E + + A++ A +G
Sbjct: 195 QVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVEMG 234
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 73/100 (73%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H+RA+RGQAT+SHS+AERVRR KI+ER++ LQ++VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 318 QVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
QVEFLSMKL + + + E + + A++ A +G
Sbjct: 206 QVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVEMG 245
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 62/70 (88%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+H+RA+RGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K G A MLDEIINYVQSLQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 317 QQVEFLSMKL 326
QVEFLSMKL
Sbjct: 1086 NQVEFLSMKL 1095
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+H+RA+RGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K G A MLDEIINYVQSLQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 317 QQVEFLSMKLA 327
QVEFLSMKL
Sbjct: 1097 NQVEFLSMKLT 1107
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 68/88 (77%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
+ P E IH+RA+RGQAT++HS+AERVRREKI R+R LQ+LVPGC K G AVMLDEIIN
Sbjct: 194 DKPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIIN 253
Query: 311 YVQSLQQQVEFLSMKLATVNPELNLDIE 338
YV SLQ QVEFLS +LA + N + E
Sbjct: 254 YVHSLQNQVEFLSRELAAASSLHNFNSE 281
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 77/107 (71%), Gaps = 5/107 (4%)
Query: 221 EKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREK 280
E + KI+ +G RGK+ K + + + +H+RA+RGQAT+SHSLAERVRR K
Sbjct: 119 ESESKIKNCSG---RGKRVKKNMMEEE--DKKSTQVVHVRARRGQATDSHSLAERVRRGK 173
Query: 281 ISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 327
I+E+++ LQ +VPGC K G A+MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 174 INEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLT 220
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 65/81 (80%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H+RA+RGQAT+SHS+AERVRR KI+ER++ LQ++VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 318 QVEFLSMKLATVNPELNLDIE 338
QVEFLSMKL + + + E
Sbjct: 206 QVEFLSMKLTAASSYYDFNSE 226
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 230 TGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQ 289
TG + RGK+ K ++ E +H+RA+RGQAT+SHSLAERVRR KI+ER+R LQ
Sbjct: 123 TGCSRRGKRLKKKNQEEEKEREV----VHVRARRGQATDSHSLAERVRRGKINERLRCLQ 178
Query: 290 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHAR 349
++VPGC K G A MLDEIINYVQSLQ QVE LSMKL + + + E + A+
Sbjct: 179 DIVPGCYKSMGMATMLDEIINYVQSLQNQVELLSMKLTAASSFYDFNSETDAVDSMQRAK 238
Query: 350 SGSAATIG 357
+ A +G
Sbjct: 239 AREAVEMG 246
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 85/134 (63%), Gaps = 8/134 (5%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI-----TGKAVML 305
+ P E IH+RA+RGQAT++HS+AERVRREKI R+R LQ+LVPGC K+ G AVML
Sbjct: 140 DKPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVML 199
Query: 306 DEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSS 365
DEIINYV SLQ QVEFLS +LA + N + E ++ I +A+ +G+
Sbjct: 200 DEIINYVHSLQNQVEFLSRELAAASSLHNFNSE---TEAIKNAQCFRVDRDHVGAGLTML 256
Query: 366 RPYPPGIFQGTMPS 379
+ G+ G +P+
Sbjct: 257 QSQGNGMLGGELPT 270
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 61/70 (87%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
E PKE IH+RAKRGQAT+SHSLAERVRRE+I+E++R LQ+LVPGC K G AVMLD IIN
Sbjct: 113 EKPKEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIIN 172
Query: 311 YVQSLQQQVE 320
YVQSLQ Q+E
Sbjct: 173 YVQSLQNQIE 182
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 79/136 (58%), Gaps = 47/136 (34%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK------------------ 297
Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQELVPGC+K
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHL 260
Query: 298 -----------------------------ITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
I G A++LDEIIN+VQSLQ+QVE LSM+LA
Sbjct: 261 LMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAA 320
Query: 329 VNPELNLDIERILSKD 344
VNP ++ +++ IL+ +
Sbjct: 321 VNPRIDFNLDTILASE 336
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 61/66 (92%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
+ ++YIH+RA+RG+AT+SHSLAERVRRE+ISERM+ L+ LVPGCNKITGKA MLDEIIN
Sbjct: 142 DKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEIIN 201
Query: 311 YVQSLQ 316
YVQSLQ
Sbjct: 202 YVQSLQ 207
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 68/102 (66%), Gaps = 29/102 (28%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN----------------- 296
K+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGC+
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTH 332
Query: 297 ------------KITGKAVMLDEIINYVQSLQQQVEFLSMKL 326
K+TGKAVMLDEIINYVQSLQ QVE + L
Sbjct: 333 AYFNFQRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDL 374
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 88/137 (64%), Gaps = 7/137 (5%)
Query: 221 EKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREK 280
E K + ++G RGK+ K++ E KE +++RA+ GQAT+S +LAERVRR K
Sbjct: 122 ESGNKFKHSSG---RGKR----VKNNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRGK 174
Query: 281 ISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERI 340
I+E++R LQ +VPGC K G AVMLDEIINYVQSLQ QVEFLS+KL + + + E
Sbjct: 175 INEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSLKLTAPSTFYDFNSEID 234
Query: 341 LSKDILHARSGSAATIG 357
+ + AR+ A +G
Sbjct: 235 ALETMQRARASEAKELG 251
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Query: 212 SSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHS 271
+ + KE +K+ + + N+ ++ K K + E P Y+H+RA+RG+AT+SHS
Sbjct: 31 TKKVKKESKREKRNPKSSVSTNLERQRPTKRQKKAP-PLEHPTGYVHVRARRGEATDSHS 89
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
LAERVRRE+IS +M+LLQ LVPGC++ITGKA++LDEII YVQSL+ ++ L +L VN
Sbjct: 90 LAERVRRERISAKMKLLQSLVPGCDQITGKALILDEIIRYVQSLKDRIGSLEAELVLVN 148
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 113 bits (282), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/62 (85%), Positives = 60/62 (96%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+SHSLAERVRREKISERM+ LQ+LVPGC K+TGKAVMLDEIINYVQSLQ+Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 319 VE 320
VE
Sbjct: 61 VE 62
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
Query: 252 APKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
+ +++I +RA+RGQAT+S S+AE VR EKI +RM+ LQ+LVPGC K+TGK MLDEIINY
Sbjct: 4 SKQDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINY 63
Query: 312 VQSLQQQVEFLSMKLATVNPE--LNLDIERILS 342
VQSLQ Q E LSMKL V+P +L +E +LS
Sbjct: 64 VQSLQCQAESLSMKLGAVHPAPLDHLTLESLLS 96
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 70/98 (71%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RGQAT+SH+LAERVRR KI+E++R LQ +VPGC K AVMLDEIINYVQSLQ QV
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 320 EFLSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
EFLS++L + + + E + + +R+ A +G
Sbjct: 212 EFLSLELTAASTFYDFNSEIDAFETMQRSRAYEAKELG 249
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 66/81 (81%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
++++RA+RG+A +SHSLAERVRR+KIS +M+LLQ LVPGC+K TGK +LD IINY+ SL
Sbjct: 133 FVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSL 192
Query: 316 QQQVEFLSMKLATVNPELNLD 336
Q QV+ L +LA V+P +++
Sbjct: 193 QDQVKSLMEELALVDPTFDVN 213
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 56/63 (88%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
M+LLQ LVPGCNKITGKA+MLDEIINYVQSLQ+QVEFLSMKLAT+NP+L+ D + SKD
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKD 60
Query: 345 ILH 347
+ H
Sbjct: 61 MSH 63
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 103 bits (257), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/60 (83%), Positives = 55/60 (91%)
Query: 274 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
ERVRRE+I ERM+ LQ LVPGCNKITGKA ML+EIINYVQSLQ+QVEFLSMKLA VNPE+
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVNPEI 62
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 62/84 (73%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
M+ LQ+LVPGCNKI GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +I+ + K+
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 60
Query: 345 ILHARSGSAATIGFSSGMNSSRPY 368
+ A + S +IG S M + Y
Sbjct: 61 VFPACAQSFPSIGMQSDMTNHPAY 84
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 260 RAKRGQATNS-HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
R R + T S +S +VRRE+ISERMR+LQ LVPGC+K+TGKA++LDEIINYVQSLQ Q
Sbjct: 61 RKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 120
Query: 319 VEFLSMKLATVNPEL 333
VEFLSM++A+++P L
Sbjct: 121 VEFLSMRIASLSPVL 135
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 61/81 (75%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
M+ LQ+LVPGCN ITGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +I+ + +K+
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLFAKE 60
Query: 345 ILHARSGSAATIGFSSGMNSS 365
A S + IG S M ++
Sbjct: 61 AFPACSTNFPAIGMSPDMTNA 81
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 246 SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
SS G AP +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA ML
Sbjct: 170 SSGGGAAPPRQTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASML 228
Query: 306 DEIINYVQSLQQQVEFLSM 324
DEII+YV+ LQ QV+ LSM
Sbjct: 229 DEIIDYVKFLQLQVKVLSM 247
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
K K E KE +H+RA+RGQAT+SHSLAERVRR KI+E+++ LQ +VPGC K G
Sbjct: 137 KRVKSYETEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMG 196
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIG 357
AVMLDEIINY FLS+KL + + + E + + AR+ A +
Sbjct: 197 MAVMLDEIINY---------FLSLKLTAASTYYDFNSEADDLETMQRARASEAKELA 244
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL-DIERILSK 343
M+ LQ+LVPGCNK+ GKA+MLDEIINYVQSLQQQVEFLSMKLATVNP+L+ ++ +L K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 344 DILHARSGSAATI 356
D+ SA ++
Sbjct: 61 DMYQPCGPSANSV 73
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL-DIERILSK 343
M+ LQ+LVPGCNK+ GKA+MLDEIINYVQSLQQQVEFLSMKLATVNP+L+ ++ +L K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 344 DILHARSGSAATI 356
D+ SA ++
Sbjct: 61 DMYQPCGPSANSV 73
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL-DIERILSK 343
M+ LQ+LVPGCNK+ GKA+MLDEIINYVQSLQQQVEFLSMKLATVNP+L+ ++ +L K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 344 DILHARSGSAATI 356
D+ SA ++
Sbjct: 61 DMYQPCGPSANSV 73
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 242 PTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
P S G AP +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T K
Sbjct: 187 PVTSSGGGGTAPPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDK 245
Query: 302 AVMLDEIINYVQSLQQQVEFLSM 324
A MLDEII+YV+ LQ QV+ LSM
Sbjct: 246 ASMLDEIIDYVKFLQLQVKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 242 PTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
P S G AP +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T K
Sbjct: 187 PVTSSGGGGTAPPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDK 245
Query: 302 AVMLDEIINYVQSLQQQVEFLSM 324
A MLDEII+YV+ LQ QV+ LSM
Sbjct: 246 ASMLDEIIDYVKFLQLQVKVLSM 268
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 25/131 (19%)
Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
KP ++S + ++ ++YIH+RA+RGQAT+SHSLAERV G
Sbjct: 139 KPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERV----------------------IG 176
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSS 360
KA++LDEIINY+QSLQ+QVEFLSMKL VN +N +E KD+ +AA I
Sbjct: 177 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAAAMI---Y 233
Query: 361 GMNSSRPYPPG 371
G ++R Y G
Sbjct: 234 GSQATREYAQG 244
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 49/51 (96%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
M+LLQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKL+TVNP L L
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLEL 51
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV
Sbjct: 132 PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYV 190
Query: 313 QSLQQQVEFLSM 324
+ LQ QV+ LSM
Sbjct: 191 EFLQLQVKVLSM 202
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV
Sbjct: 132 PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYV 190
Query: 313 QSLQQQVEFLSM 324
+ LQ QV+ LSM
Sbjct: 191 KFLQLQVKVLSM 202
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV
Sbjct: 132 PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYV 190
Query: 313 QSLQQQVEFLSM 324
+ LQ QV+ LSM
Sbjct: 191 KFLQLQVKVLSM 202
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV
Sbjct: 132 PQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYV 190
Query: 313 QSLQQQVEFLSM 324
+ LQ QV+ LSM
Sbjct: 191 KFLQLQVKVLSM 202
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 207 DPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKP-TKDSSLSGEAPKE-YIHMRAKRG 264
+PS S + +Q E + E N+ K + K +K+ S G+ KE Y+H+RAKRG
Sbjct: 84 NPSASSKNVGDQQTEVSSQPESNSMERDNRKISPKTQSKEDSSDGDGTKENYVHLRAKRG 143
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKIT 299
QATNSHSLAER+RR+KISERM+LLQ+LVPGCNK+T
Sbjct: 144 QATNSHSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 28/190 (14%)
Query: 153 YERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDS 212
Y+ N++ + +HQI ++ A + +S LL+ + + Q D S
Sbjct: 84 YDEQHNNLASKFRNHQITDKTAAALML------LTADSGGLLHMPADFDSS-QNDVVNTS 136
Query: 213 SGILKEQDEKKQKIEQNTGANMRGKQAAKP------------------TKDSSLSGEAPK 254
S + D Q + ++ G A+P T + SG +
Sbjct: 137 SLLQAAGDASVQALFNGFSGSLHG--VAQPHHFQPPQGQSFGSGSVSATNQAPASGAPAQ 194
Query: 255 EYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+
Sbjct: 195 PRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKF 253
Query: 315 LQQQVEFLSM 324
LQ QV+ LSM
Sbjct: 254 LQVQVKVLSM 263
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 87/158 (55%), Gaps = 29/158 (18%)
Query: 191 NSLLNTDKNVEVELQKDPSGDSS---------GILKEQDEKKQKIEQNTGANMRGKQAAK 241
N L N D+N V +P+ DSS G L + + Q G M+ +
Sbjct: 159 NMLGNGDQNDGV---GNPANDSSVQALFNGFTGSLGQNSSQPQHFHHPQGGTMQAQSFGA 215
Query: 242 PTKDSSL------SGEA---------PKEYIHMRAKRGQATNSHSLAERVRREKISERMR 286
P ++ SG A PK+ +RA+RGQAT+ HS+AER+RRE+I+ERM+
Sbjct: 216 PATAPAMNQTPAASGSAGGGTTPAAQPKQQ-RVRARRGQATDPHSIAERLRRERIAERMK 274
Query: 287 LLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
LQELVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 275 ALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 311
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 236 GKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGC 295
G +P S G + +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP
Sbjct: 233 GAMMNQPQASGSTGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 292
Query: 296 NKITGKAVMLDEIINYVQSLQQQVEFLSM 324
NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 293 NK-TDKASMLDEIIDYVKFLQLQVKVLSM 320
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 236 GKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGC 295
G + T + SG + +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP
Sbjct: 173 GSGSVSATNQAPASGAPAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 232
Query: 296 NKITGKAVMLDEIINYVQSLQQQVEFLSM 324
NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 233 NK-TDKASMLDEIIDYVKFLQVQVKVLSM 260
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 248 LSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
+S PK+ + RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDE
Sbjct: 195 VSQSQPKQKV--RARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDE 251
Query: 308 IINYVQSLQQQVEFLSM 324
II+YV+ LQ QV+ LSM
Sbjct: 252 IIDYVKFLQLQVKVLSM 268
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
PK+ + RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV
Sbjct: 193 PKQRV--RARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYV 249
Query: 313 QSLQQQVEFLSM 324
+ LQ QV+ LSM
Sbjct: 250 KFLQLQVKVLSM 261
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 194
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 195 VKVLSM 200
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 226 IEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERM 285
+ Q +G + + A + + + P+ +RA+RGQAT+ HS+AER+RRE+I+ERM
Sbjct: 97 LPQGSGGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERM 156
Query: 286 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
+ LQELVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 157 KSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 283
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 284 VKVLSM 289
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 249 SGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
+G AP + +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDE
Sbjct: 249 AGGAPAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDE 307
Query: 308 IINYVQSLQQQVEFLSM 324
II+YV+ LQ QV+ LSM
Sbjct: 308 IIDYVKFLQLQVKVLSM 324
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 226 IEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERM 285
+ Q +G + + A + + + P+ +RA+RGQAT+ HS+AER+RRE+I+ERM
Sbjct: 97 LPQGSGGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERM 156
Query: 286 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
+ LQELVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 157 KSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 5/93 (5%)
Query: 246 SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
S+ S ++ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA ML
Sbjct: 86 STTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASML 144
Query: 306 DEIINYVQSLQQQVEFLSMK----LATVNPELN 334
DEII YV+ LQ QV+ LSM +V P LN
Sbjct: 145 DEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLN 177
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 318 QVEFLSM-KLATVNPELNLD 336
QV+ LSM +L +N D
Sbjct: 89 QVKVLSMSRLGGAGALVNSD 108
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 247
Query: 320 EFLSM 324
+ LSM
Sbjct: 248 KVLSM 252
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+ISER++ LQELVP CNK T +A MLDEI++YV+ L+ Q
Sbjct: 142 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVKFLRLQ 200
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 201 VKVLSM 206
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P++ + RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV
Sbjct: 33 PRQRV--RARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYV 89
Query: 313 QSLQQQVEFLSM 324
+ LQ QV+ LSM
Sbjct: 90 KFLQLQVKVLSM 101
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 311
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 312 VKVLSM 317
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 89
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 90 QVKVLSM 96
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP CNK T +A MLDEI++YV
Sbjct: 52 PQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYV 110
Query: 313 QSLQQQVEFLSM 324
+ L+ QV+ LSM
Sbjct: 111 KFLRLQVKVLSM 122
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 232
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 233 VKVLSM 238
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 226 IEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERM 285
+ Q +G + + A + + + P+ +RA+RGQAT+ HS+AER+RRE+I+ERM
Sbjct: 154 LPQGSGGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERM 213
Query: 286 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
+ LQELVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 214 KSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 251
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQVQ 202
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
+ P +RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK T +AVMLDEI++
Sbjct: 114 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAVMLDEILD 172
Query: 311 YVQSLQQQVEFLSM 324
YV+ L+ QV+ LSM
Sbjct: 173 YVKFLRLQVKVLSM 186
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP CNK T +A MLDEI++YV
Sbjct: 151 PQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYV 209
Query: 313 QSLQQQVEFLSM 324
+ L+ QV+ LSM
Sbjct: 210 KFLRLQVKVLSM 221
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+ISER++ LQELVP CNK T +A MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVKFLRLQ 199
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 200 VKVLSM 205
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 254
Query: 320 EFLSM 324
+ LSM
Sbjct: 255 KVLSM 259
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 249 SGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
+G AP + +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDE
Sbjct: 93 AGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDE 151
Query: 308 IINYVQSLQQQVEFLSM 324
II+YV+ LQ QV+ LSM
Sbjct: 152 IIDYVKFLQLQVKVLSM 168
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 5/93 (5%)
Query: 246 SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
S+ S ++ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA ML
Sbjct: 86 STTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASML 144
Query: 306 DEIINYVQSLQQQVEFLSMK----LATVNPELN 334
DEII YV+ LQ QV+ LSM V P LN
Sbjct: 145 DEIIEYVRFLQLQVKVLSMSRLGGAGAVGPRLN 177
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQLQV 253
Query: 320 EFLSM 324
+ LSM
Sbjct: 254 KVLSM 258
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 2/67 (2%)
Query: 286 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI--ERILSK 343
R LQ+LVPGCNK+ GKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP+L+ + +L K
Sbjct: 119 RSLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPK 178
Query: 344 DILHARS 350
D+ R+
Sbjct: 179 DVRGTRT 185
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKIS+RM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P++ + RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEI++YV
Sbjct: 236 PRQRV--RARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYV 292
Query: 313 QSLQQQVEFLSM 324
+ LQ QV+ LSM
Sbjct: 293 KFLQLQVKVLSM 304
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P++ + RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEI++YV
Sbjct: 235 PRQRV--RARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYV 291
Query: 313 QSLQQQVEFLSM 324
+ LQ QV+ LSM
Sbjct: 292 KFLQLQVKVLSM 303
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKIS+RM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P+ +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV
Sbjct: 122 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYV 180
Query: 313 QSLQQQVEFLSM 324
+ LQ QV+ LSM
Sbjct: 181 KFLQLQVKVLSM 192
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 238 QAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
QA + ++ + P +RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK
Sbjct: 95 QAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK 154
Query: 298 ITGKAVMLDEIINYVQSLQQQVEFLSM 324
T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 155 -TDRAAMLDEILDYVKFLRLQVKVLSM 180
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 216 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 274
Query: 318 QVEFLSM 324
QV+ LS+
Sbjct: 275 QVKVLSV 281
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 248 LSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
++ + P +RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK T +A MLDE
Sbjct: 104 MAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDE 162
Query: 308 IINYVQSLQQQVEFLSM 324
I++YV+ L+ QV+ LSM
Sbjct: 163 ILDYVKFLRLQVKVLSM 179
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 246 SSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
+++ + P +RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK T +A ML
Sbjct: 111 AAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAML 169
Query: 306 DEIINYVQSLQQQVEFLSM 324
DEI++YV+ L+ QV+ LSM
Sbjct: 170 DEILDYVKFLRLQVKVLSM 188
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII YV+ LQ
Sbjct: 29 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIGYVKFLQL 87
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 88 QVKVLSM 94
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII YV+ LQ
Sbjct: 295 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 353
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 354 QVKVLSM 360
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 58/73 (79%), Gaps = 3/73 (4%)
Query: 252 APKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
APK + RA+RGQAT+ HS+AER+RREKIS+RM+ LQELVP N+ T KA MLDEII Y
Sbjct: 293 APKPRV--RARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEY 349
Query: 312 VQSLQQQVEFLSM 324
V+ LQ QV+ LSM
Sbjct: 350 VKFLQLQVKVLSM 362
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 192 VKVLSM 197
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII YV+ LQ
Sbjct: 148 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 206
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 207 QVKVLSM 213
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK T +A MLDEI++YV+ L+ QV
Sbjct: 127 RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQV 185
Query: 320 EFLSM 324
+ LSM
Sbjct: 186 KVLSM 190
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 192 VKVLSM 197
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P + +RA+RGQAT+ HS+AER+RRE+ISER++ LQELVP CNK T +A ++DEI++YV
Sbjct: 128 PAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAALVDEILDYV 186
Query: 313 QSLQQQVEFLSM 324
+ L+ QV+ LSM
Sbjct: 187 KFLRLQVKVLSM 198
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RGQAT+ HS+AER+RREKISERM+ LQ+LVP NK KA MLDEII+YV+ LQ QV
Sbjct: 316 RARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQV 374
Query: 320 EFLSM 324
+ LSM
Sbjct: 375 KVLSM 379
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 24 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 82
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 83 VKVLSM 88
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP NK T KA MLDEI++YV+ LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 62 QVKVLSM 68
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RGQAT+ HS+AER+RREKISERM+ LQELVP NK K+ MLDEII+YV+ LQ QV
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNK-ADKSSMLDEIIDYVKFLQLQV 380
Query: 320 EFLSM 324
+ LSM
Sbjct: 381 KVLSM 385
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 151 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRLQ 209
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 210 VKVLSM 215
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERMR LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 239
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 240 VKVLSM 245
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRLQ 227
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 228 VKVLSM 233
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK + +A MLDEI++YV+ L+ Q
Sbjct: 180 VRARRGQATDPHSIAERLRRERIAERMRALQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 239 VKVLSM 244
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERMR LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 190
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 191 VKVLSM 196
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKIS+RM+ LQ+LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 175 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRLQ 233
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 234 VKVLSM 239
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRLQ 157
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 158 VKVLSM 163
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RR +I+ER++ LQELVP CNK T +A MLDEI++YV+ L+
Sbjct: 19 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 77
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 78 QVKVLSM 84
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKIS+RM+ LQ+LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKIS+RM+ LQ+LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERMR LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 319 VEFLSM 324
V+ LS+
Sbjct: 192 VKVLSI 197
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKIS+RM+ LQ+LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 375
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 376 VKVLSM 381
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 166 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRLQ 224
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 225 VKVLSM 230
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRLQ 227
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 228 VKVLSM 233
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RGQAT+ HS+AER+RREKISERM+ LQ LVP NK KA MLDEII+YV+ LQ QV
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 375
Query: 320 EFLSM 324
+ LSM
Sbjct: 376 KVLSM 380
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RGQAT+ HS+AER+RREKISERM+ LQ LVP NK KA MLDEII+YV+ LQ QV
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 375
Query: 320 EFLSM 324
+ LSM
Sbjct: 376 KVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RGQAT+ HS+AER+RREKISERM+ LQ LVP NK KA MLDEII+YV+ LQ QV
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 375
Query: 320 EFLSM 324
+ LSM
Sbjct: 376 KVLSM 380
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RR +I+ER++ LQELVP CNK T +A MLDEI++YV+ L+
Sbjct: 15 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 73
Query: 318 QVEFLSM 324
Q++ LSM
Sbjct: 74 QIKVLSM 80
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RGQAT+ HS+AER+RREKISERM+ LQ+LVP NK K+ MLDEII+YV+ LQ QV
Sbjct: 321 RARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQLQV 379
Query: 320 EFLSM 324
+ LSM
Sbjct: 380 KVLSM 384
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKIS+RM+ LQ+LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 340
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 341 VKVLSM 346
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 247 SLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLD 306
S + + P +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T +A M+D
Sbjct: 151 SAASQPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANK-TDRAAMID 209
Query: 307 EIINYVQSLQQQVEFLSM 324
EI++YV+ L+ QV+ LSM
Sbjct: 210 EIVDYVKFLRLQVKVLSM 227
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RGQAT+ HS+AER+RREKISERM+ LQ LVP NK KA MLDEII+YV+ LQ QV
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 298
Query: 320 EFLSM 324
+ LSM
Sbjct: 299 KVLSM 303
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RG AT+ HS+AER+RREKI+ERM+ LQELVP NK+ KA MLDEII YV+ LQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKVD-KASMLDEIIEYVKFLQL 297
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 298 QVKVLSM 304
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RREKI+ERM+ LQELVP +K+ KA MLDEII YV+ LQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKV-DKASMLDEIIEYVKFLQL 408
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 409 QVKVLSM 415
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 10/121 (8%)
Query: 179 TNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQ 238
T+ ++R P N ++ D+ L D S + S K++ E+ TG GK
Sbjct: 181 TSDSKKRRRP--NEVMGGDQVQSSNLPAD-SANESVHSKDKGEESSLATTTTGP---GKS 234
Query: 239 AAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
K +++S E+ KE YIH+RA+RGQATNSHSLAER+RREKISERM+LLQ+LVPGC+K
Sbjct: 235 KGKGARETS---ESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 291
Query: 298 I 298
+
Sbjct: 292 V 292
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 244 KDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 303
K +S +G + RA+RGQAT+ HS+AER+RREKISERM+ LQ+LVP NK K+
Sbjct: 304 KANSANGNSASAKPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSS 362
Query: 304 MLDEIINYVQSLQQQVEFLSM 324
MLDEII+YV+ LQ QV+ L M
Sbjct: 363 MLDEIIDYVKFLQLQVKVLCM 383
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 54/64 (84%), Gaps = 2/64 (3%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI--TGKAVMLDEIINYVQSLQ 316
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK+ T KA MLDEII+YV+ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 317 QQVE 320
QV+
Sbjct: 310 LQVK 313
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 217
Query: 319 VE 320
V+
Sbjct: 218 VK 219
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKIS+RM+ LQ+LVP NK KA MLDEII++V+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDHVKFLQLQ 378
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 55/66 (83%), Gaps = 3/66 (4%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 308
Query: 319 VEFLSM 324
V LSM
Sbjct: 309 V--LSM 312
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 52/62 (83%), Gaps = 3/62 (4%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP---ELNLDIERIL 341
M+ LQ LVPGC+K+TGKA++LDEIINYVQSLQ QVEFLSMKLA VNP +L +D++ ++
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTLM 60
Query: 342 SK 343
+
Sbjct: 61 VR 62
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 52/62 (83%), Gaps = 3/62 (4%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP---ELNLDIERIL 341
M+ LQ LVPGC+K+TGKA++LDEIINYVQSLQ QVEFLSMKLA VNP +L +D++ ++
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTLM 60
Query: 342 SK 343
+
Sbjct: 61 VR 62
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 6/76 (7%)
Query: 249 SGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI-----TGKA 302
+G AP + +RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK+ T KA
Sbjct: 274 AGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKA 333
Query: 303 VMLDEIINYVQSLQQQ 318
MLDEII+YV+ LQ Q
Sbjct: 334 SMLDEIIDYVKFLQLQ 349
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 47/54 (87%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIE 338
M++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN LN IE
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIE 54
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RREKIS+RM+ LQELVP NK T KA ML+EII Y++ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQLQ 340
Query: 319 VEFLSM 324
+ LSM
Sbjct: 341 TKVLSM 346
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI--TGKAVMLDEIINYVQSLQ 316
+RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 317 QQVE 320
QV+
Sbjct: 298 LQVK 301
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 264 GQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
GQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVLS 227
Query: 324 M 324
M
Sbjct: 228 M 228
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 237 KQAAKPTKDSSLSGEAPKEYIH--MRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
+ AA P KD+ K+ I M +KR +A H+L+ER RR++I+E+MR LQEL+P
Sbjct: 337 RDAANPLKDAEFESADAKKRIRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPR 396
Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 329
CNK + KA MLDE I Y++SLQ QV+ +SM + V
Sbjct: 397 CNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCSMV 430
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 252 APKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
APK + RA+RGQAT+ HS+AER+RREKIS+RM+ LQELVP N+ T KA MLDEII Y
Sbjct: 293 APKPRV--RARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEY 349
Query: 312 VQSLQQQVEFLS 323
V+ LQ QV+ S
Sbjct: 350 VKFLQLQVKVRS 361
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 47/50 (94%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN 334
M++LQ LVPGC+K+TGKA+MLDEIINYVQSLQ QVEFLSMKLA+++P L+
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLH 50
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 29/185 (15%)
Query: 155 RNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSG 214
++ RN Q++ CE A GVA KT++ S+S+ +D +VE DP+ +
Sbjct: 367 KSDRNCRQNF-----CESAIKGVADVEKTKEPVVASSSV-GSDNSVE-RASDDPTEN--- 416
Query: 215 ILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRA----KRGQATNSH 270
LK K + E++ G P++D K+ RA KR +A H
Sbjct: 417 -LKR---KHRDTEESEG----------PSEDVEEESVGAKKQAPARAGNGSKRNRAAEVH 462
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+ +SM
Sbjct: 463 NLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGLYM 521
Query: 331 PELNL 335
P + L
Sbjct: 522 PSMML 526
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 3/65 (4%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 298
Query: 320 EFLSM 324
LSM
Sbjct: 299 --LSM 301
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 264 GQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
GQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 324 M 324
M
Sbjct: 323 M 323
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 50/62 (80%), Gaps = 6/62 (9%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 313
+++IH+RA+RGQAT+SHSLAER RREKI+ERM++LQ+LVPGCNK ++ + Y Q
Sbjct: 115 QDFIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNK------LMRPWLGYWQ 168
Query: 314 SL 315
S+
Sbjct: 169 SI 170
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 264 GQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
GQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 324 M 324
M
Sbjct: 323 M 323
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 43/44 (97%)
Query: 254 KEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
++Y+H+RAKRGQATNSHSLAER RREKI+ERM+LLQ+LVPGCNK
Sbjct: 149 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 192
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P++ + RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELV NK T KA MLDEII+YV
Sbjct: 141 PRQRV--RARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYV 197
Query: 313 QSLQQQVEFLS 323
+ LQ QV +S
Sbjct: 198 KFLQLQVLSMS 208
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P++ + RA+RGQAT+ HS+AER+RRE+I+ERM+ LQELV NK T KA MLDEII+YV
Sbjct: 113 PRQRV--RARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYV 169
Query: 313 QSLQQQVEFLS 323
+ LQ QV +S
Sbjct: 170 KFLQLQVLSMS 180
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 45/49 (91%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
M++LQ LVPGC+K+TGKA MLDEIINYVQSLQ QVEFLSMKLA+++P L
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVL 49
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 68/134 (50%), Gaps = 46/134 (34%)
Query: 198 KNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI 257
K + +L D +GD +D K + G N +GK D++ GE PK+YI
Sbjct: 231 KAKKCKLSADAAGD-------EDTKPVAGDAGHGGNGKGK-----VLDAA--GEPPKDYI 276
Query: 258 HMRAKRGQATNSHSLAER--------------------------------VRREKISERM 285
H+RA+RGQAT+SHSLAER VRREKISERM
Sbjct: 277 HVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERM 336
Query: 286 RLLQELVPGCNKIT 299
+LLQ+LVPGCNK+
Sbjct: 337 KLLQDLVPGCNKVA 350
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 46/49 (93%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
MR+LQ LVPGC+K+TGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 49
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KRG+A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 376 IMSMGAGIYMPSMML 390
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 46/49 (93%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 333
MR+LQ LVPGC+K+TGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 49
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Query: 212 SSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHS 271
SS + D K+++ E++ G + + ++ + +S+ A K + M KR +++ H+
Sbjct: 170 SSSLCSNNDPKRRRREEDDGVDYQTEENGE--GESTNRRHAGKGRL-MNKKRSRSSEVHN 226
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
L+ER RR++I+E+MR LQELVP CNK KA ML+E+I Y++SLQ QV+ +SM
Sbjct: 227 LSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQAMSM 279
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KRG+A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 376 IMSMGAGMYMPSMML 390
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KRG+A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 376 IMSMGAGMYMPSMML 390
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KRG+A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 376 IMSMGAGMYMPSMML 390
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KRG+A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 376 IMSMGAGMYMPSMML 390
>gi|449461981|ref|XP_004148720.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 98
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
Query: 182 KTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAK 241
K RKR +S +++K +++++ D SGDSS Q+EK ++EQ G N RGK K
Sbjct: 3 KFRKRGLDSTFPFSSNKKSDMKVKNDVSGDSSST---QEEKNAEMEQILGGNSRGKSTRK 59
Query: 242 PTKD-SSLSGEAPKE-YIHMRAKRGQATNSHSLAERV 276
TK+ S+ S EAPKE YIH+RA+RGQATNSHS+AERV
Sbjct: 60 QTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV 96
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 51/67 (76%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+ RAKRG AT+ S+AERVRR KISERM+ LQ+LVP +K T + MLDE + YV+SLQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 317 QQVEFLS 323
+QV+ LS
Sbjct: 441 RQVQELS 447
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
SG+ +G K+ + +Q+ + A Q P +S + AKR +
Sbjct: 332 SGNGAGTGKDDESWRQQKRKTLQAECSASQDDDPDDESG----GMRRSCSRGAKRSRTAE 387
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+ +SM
Sbjct: 388 VHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQMMSM 442
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 319 VEFLS 323
V+ LS
Sbjct: 393 VQTLS 397
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 522
Query: 321 FLSMKLATVNPELNL 335
+SM P++ L
Sbjct: 523 MMSMGAGLYMPQMML 537
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 48/65 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQ+LVP +K T A MLD + Y++ LQ Q
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 319 VEFLS 323
VE LS
Sbjct: 397 VEALS 401
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATN 268
SG+ +G K+ + +Q+ + A Q P +S + AKR +
Sbjct: 129 SGNGAGTGKDDESWRQQKRKTLQAECSASQDDDPDDESG----GMRRSCSRGAKRSRTAE 184
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+ +SM
Sbjct: 185 VHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQMMSM 239
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 319 VEFLS 323
V+ LS
Sbjct: 390 VQTLS 394
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQELVP +K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 319 VEFLS 323
V+ LS
Sbjct: 419 VQTLS 423
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQELVP +K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 319 VEFLS 323
V+ LS
Sbjct: 419 VQTLS 423
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA RG AT+ S+AERVRR KISERM+ LQELVP ++ T A MLD+ + YV+ LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 319 VEFLSMKLATVNPELNLDIERI 340
V+ L+ +A EL L ER+
Sbjct: 439 VQELTNTVA----ELQLLQERL 456
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
M +KR +A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ Q
Sbjct: 449 MGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQ 507
Query: 319 VEFLSM 324
V+ +SM
Sbjct: 508 VQMMSM 513
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 519
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 520 IMSMGAGLYMPSMML 534
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 425
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 426 IMSMGAGLYMPPMML 440
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 41/43 (95%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
Y+H+RA+RGQAT++HSLAER RREKI+ RM+LLQELVPGC+K+
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 10/82 (12%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN---LDIERIL 341
M LL+ELVPGC+K++G A++LDEIIN+VQSLQ+QVE+LSM+LA VNP ++ LD
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLD----- 55
Query: 342 SKDILHARSGSAATIGFSSGMN 363
+ L G + + +GM+
Sbjct: 56 --NFLTTECGRITGLNYKNGMD 75
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 41/44 (93%)
Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 299
Y+H+RA+RGQAT+SHSLAER RREKI+ RM+LLQELVPGC+K T
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGT 244
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
RL + + I G A++LDEIIN+VQSLQ+QVE LSM+LA VNP ++ +++ IL+ +
Sbjct: 290 FRLTRHSLAASFTIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 349
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 501
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 502 IMSMGTGLCMPPMML 516
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 319 VEFLS 323
VE LS
Sbjct: 399 VETLS 403
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 489
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 490 IMSMGAGLYMPPMML 504
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 46/51 (90%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
M LL+ELVPGC+K++G A++LDEIIN+VQSLQ+QVE+LSM+LA VNP ++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQ+LVP +K T A MLD + Y++ LQ Q
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 319 VEFLS 323
V+ LS
Sbjct: 400 VQTLS 404
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 380
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 381 IMSMGTGLCMPPMML 395
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 516
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 517 IMSMGTGLCMPPMML 531
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 319 VEFLS 323
V+ LS
Sbjct: 279 VKTLS 283
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 46/51 (90%)
Query: 285 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNL 335
M LL+ELVPGC+K++G A++LDEIIN+VQSLQ+QVE+LSM+LA VNP ++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQ+LVP +K T + MLD + Y++ LQ Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 319 VEFLS 323
VE LS
Sbjct: 415 VETLS 419
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
T+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 221 TDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+ RAKRG AT+ S+AERVRR KISERM+ LQ+LVP +K T + MLDE + YV+SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 317 QQVEFLSMKLATVNPE 332
++V+ LS +A + +
Sbjct: 90 RKVQELSDTVARLKAD 105
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD + Y++ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 319 VEFLSMKLA 327
+ LS K A
Sbjct: 360 FKTLSEKRA 368
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 50/71 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD + Y++ LQ+Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 319 VEFLSMKLATV 329
+ LS K A
Sbjct: 354 FKTLSEKRANC 364
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA RG AT+ S+AERVRR KISERM+ LQ+LVP ++ T A MLD+ + YV+ LQQQ
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 319 VEFLSMKLATVNPELNLDIERILSKD 344
V+ LS +A EL ER+ +D
Sbjct: 123 VQELSKTVA----ELQQLQERLGRRD 144
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 407
Query: 322 LSMKLATVNPELNLDIE---RILSKDILHARSGSAATIGFSSGMNSSRPYP----PGIFQ 374
++M P + L +I S H MNS+ P PG
Sbjct: 408 MAMGSGLCIPPMLLPRAMQLQIPSIAHFHHLGMGLGYGMGVLDMNSTAAVPFQPIPGAHY 467
Query: 375 GTMPSIPGANPQ 386
T P IPG PQ
Sbjct: 468 -TCPMIPGTPPQ 478
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 516
Query: 321 FLSM 324
+SM
Sbjct: 517 IMSM 520
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+L+ER RR++I+E+M+ LQEL+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 324
Query: 321 FLSMKLATV 329
+SM + V
Sbjct: 325 MMSMGCSMV 333
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+L+ER RR++I+E+M+ LQEL+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 362
Query: 321 FLSMKLATV 329
+SM + V
Sbjct: 363 MMSMGCSMV 371
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE--YIHMRAKRGQA 266
+G SS ++ + + + +K N R ++ A T ++ E K+ KR +A
Sbjct: 228 TGTSSSVVSKSEIEPEKT--NVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRA 285
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
H+L+ER RR++I+ERM+ LQEL+P CNK + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 286 AEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 48/64 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP K T A MLD ++Y++ LQ+Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 319 VEFL 322
V+ L
Sbjct: 385 VKVL 388
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A MLDE + YV+ LQ Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 319 VEFLS 323
+E LS
Sbjct: 178 IEELS 182
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 415
Query: 322 LSMKLATV 329
+SM + V
Sbjct: 416 MSMGCSMV 423
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 367
Query: 322 LSMKLATVNPELNL 335
+SM P + L
Sbjct: 368 MSMGTGLCIPPMLL 381
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 439
Query: 322 LSMKLATVNPELNL 335
+SM P + L
Sbjct: 440 MSMGTGLCIPPMLL 453
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE--YIHMRAKRGQA 266
+G SS ++ + + + +K N R ++ A T ++ E K+ KR +A
Sbjct: 228 TGTSSSVVSKSEIEPEKT--NVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRA 285
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
H+L+ER RR++I+ERM+ LQEL+P CNK + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 286 AEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 217
Query: 322 LSMKLATVNPELNLDIE---RILSKDILHARSGSAATIGFSSGMNSSRPYP----PGIFQ 374
++M P + L +I S H MNS+ P PG
Sbjct: 218 MAMGSGLCIPPMLLPRAMQLQIPSIAHFHHLGMGLGYGMGVLDMNSTAAVPFQPIPGAHY 277
Query: 375 GTMPSIPGANPQ 386
T P IPG PQ
Sbjct: 278 -TCPMIPGTPPQ 288
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 319 VEFL 322
V+ L
Sbjct: 352 VKVL 355
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 319 VEFL 322
V+ L
Sbjct: 345 VKVL 348
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 10/133 (7%)
Query: 201 EVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAK---PTKDSSLSGEAPKEYI 257
++ + P G SS DE Q +G++A + ++D EA K+
Sbjct: 245 DLTMTSSPGGSSSC-----DEPVQVAAAEEDRKRKGREAEEWECQSEDVDFESEAKKQVC 299
Query: 258 -HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
KR +A H+L+ER RR++I+E+M+ LQEL+P CNK + KA MLDE I+Y++SLQ
Sbjct: 300 GSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAISYLKSLQ 358
Query: 317 QQVEFLSMKLATV 329
QV+ +SM V
Sbjct: 359 LQVQMMSMGCGMV 371
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 321 FLSMKLATV 329
+ M A +
Sbjct: 388 MMWMGSAGI 396
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD ++Y++ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 319 VEFLS 323
+ LS
Sbjct: 331 YKTLS 335
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 321 FLSMKLATV 329
+ M A +
Sbjct: 388 MMWMGSAGI 396
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE--YIHMRAKRGQA 266
+G SS ++ + + + +K N R ++ A T ++ E K+ KR +A
Sbjct: 157 TGTSSSVVSKSEIEPEKT--NVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRA 214
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
H+L+ER RR++I+ERM+ LQEL+P CNK + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 215 AEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 271
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+RAKRG AT+ S+AERVRR KISER+R LQELVP K T A MLD ++Y++ LQ
Sbjct: 158 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQ 217
Query: 317 QQVEFL 322
+QV+ L
Sbjct: 218 KQVKVL 223
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR ++ H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 321 FLSM 324
+SM
Sbjct: 398 IMSM 401
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP +K T A MLD ++Y++ LQ+Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 319 VEFLSMKLA 327
+ LS K A
Sbjct: 363 FKTLSDKRA 371
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE--YIHMRAKRGQA 266
+G SS ++ + + + +K N R ++ A T ++ E K+ KR +A
Sbjct: 157 TGTSSSVVSKSEIEPEKT--NVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRA 214
Query: 267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
H+L+ER RR++I+ERM+ LQEL+P CNK + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 215 AEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 271
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 495
Query: 322 LSMKLATVNPELNL 335
+SM P + L
Sbjct: 496 MSMGTGLCIPPMLL 509
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 507
Query: 322 LSMKLATVNPELNL 335
+SM P + L
Sbjct: 508 MSMGTGLCIPPMLL 521
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR ++ H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y++SLQ QV+
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 395
Query: 321 FLSM 324
+SM
Sbjct: 396 IMSM 399
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT-GKAVMLDEIINYVQSLQQ 317
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T A MLDE + YV+SLQ+
Sbjct: 468 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQK 527
Query: 318 QVEFLSMKLA----TVNPE 332
QV+ L+ A T NP+
Sbjct: 528 QVQELAENRAKCTCTHNPD 546
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ SLAERVRR +ISERMR LQE+VP +K T + MLD + Y++ LQ+Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 319 VEFLSMKLA 327
++ +S K A
Sbjct: 303 LKTMSAKRA 311
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 319 VEFLSMKLATVNPELNLDIERILSKDIL 346
+ LS A + +++++ LS I+
Sbjct: 342 FKTLSDNRANC---VCVNMQKPLSNQIM 366
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 17/131 (12%)
Query: 207 DPSGDSS-------GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSL-SGEAPKEYIH 258
+P G SS G + EQD K++ IE ++ ++D S EA K
Sbjct: 200 EPGGSSSSEEPEPVGKVAEQDRKRKGIE--------AEEWEYQSEDVDFESAEAKKNISG 251
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
KR +A H+L+ER RR++I+E+M+ LQEL+P NK + KA MLDE I+Y++SLQ Q
Sbjct: 252 SSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQ 310
Query: 319 VEFLSMKLATV 329
V+ +SM V
Sbjct: 311 VQMMSMGCGMV 321
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A MLDE + YV+ LQ+Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 319 VEFLS 323
+E LS
Sbjct: 141 IEELS 145
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 382
Query: 321 FLSMKLATVNP 331
+ M P
Sbjct: 383 MMWMGSGIAAP 393
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 319 VEFLSMKLATVN 330
V+ L+ A+
Sbjct: 357 VKALNESRASCT 368
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 460
Query: 322 LSMKLATVNPELNL 335
+SM P + L
Sbjct: 461 MSMGTGLCIPPMLL 474
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 319 VEFLSMKLATVN 330
V+ L+ A+
Sbjct: 357 VKALNESRASCT 368
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP K T A MLD ++Y++ LQ+Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 319 VEFL 322
V+ L
Sbjct: 379 VKVL 382
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 319 VEFL 322
V+ L
Sbjct: 378 VKVL 381
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR + H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 321 FLSM 324
+SM
Sbjct: 398 IMSM 401
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 319 VEFLSMKLATVN 330
V+ L+ A+
Sbjct: 377 VKALNESRASCT 388
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 48/62 (77%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 319 VE 320
V+
Sbjct: 422 VK 423
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+ +RAKRG AT+ S+AERVRR KISERMR LQ+LVP +K T A MLD ++Y++ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 317 QQVEFL 322
+Q + L
Sbjct: 390 KQAQKL 395
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP +K T A MLD ++Y++ LQ+Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 319 VEFLSMKLATVN 330
V+ ++ A+
Sbjct: 367 VKVINESRASCT 378
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 49/64 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP +K T A MLD ++Y++ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 319 VEFL 322
V+ +
Sbjct: 360 VKVI 363
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 369
Query: 321 FLSM 324
+ M
Sbjct: 370 MMWM 373
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 319 VEFL 322
+ L
Sbjct: 345 YKIL 348
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP K T A MLD ++Y++ LQ+Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 319 VEFL 322
V+ L
Sbjct: 357 VKVL 360
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 243 TKDSSLSGEAPKEYIH--MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
++D K+ +H KR +A H+L+ER RR++I+E+M+ LQEL+P CNK +
Sbjct: 239 SEDVDFESPEAKKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SD 297
Query: 301 KAVMLDEIINYVQSLQQQVEFLSMKLATV 329
KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 298 KASMLDEAIEYLKSLQLQVQMMSMGYGMV 326
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 90
Query: 321 FLSM 324
+ M
Sbjct: 91 MMWM 94
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 319 VEFL 322
+ L
Sbjct: 339 YKIL 342
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 319 VEFL 322
+ L
Sbjct: 339 YKIL 342
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP +K T A MLD ++Y++ LQ+Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 319 VEFL 322
V+ L
Sbjct: 382 VKGL 385
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 319 VEFL 322
+ L
Sbjct: 360 YKIL 363
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+L+ER RR++I+ERM+ LQEL+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 347
Query: 321 FLSM 324
+SM
Sbjct: 348 VMSM 351
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A MLDE + YV+ LQ+
Sbjct: 169 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQR 228
Query: 318 QVEFLS 323
Q++ L+
Sbjct: 229 QIQELT 234
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 73/146 (50%), Gaps = 25/146 (17%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR + H+L+ER RR++I+E+MR LQEL+P CNK+ K+ ML+E I Y+++LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KSSMLEEAIEYLKTLQLQVQ 376
Query: 321 FLSMKLATVNPELNLDIERILSKDILH-------------ARSGSAATIGF------SSG 361
+SM P + + + + +LH G A GF
Sbjct: 377 MMSMGTGLCMPPAAMLLP-AMQQQLLHHHPMAHFPHLGMGLGFGMGAAAGFDMLPFPCVA 435
Query: 362 MNSSRPYPPGIFQGT----MPSIPGA 383
+ P PPG G MPS+P A
Sbjct: 436 AGAHFPCPPGAMFGVPGQAMPSLPAA 461
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQ+LVP + T A MLD + Y++ LQ+Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 319 VEFL 322
V+ L
Sbjct: 364 VKAL 367
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP +K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 319 VEFL 322
V+ L
Sbjct: 378 VKGL 381
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 319 VEFLSMKLATVN 330
V+ L+ A+
Sbjct: 254 VKALNESRASCT 265
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQEL P +K T A MLD + Y++ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 319 VEFL 322
V+ L
Sbjct: 393 VKTL 396
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISERMR LQ+LVP + T A MLD + Y++ LQ+Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 319 VEFL 322
V+ L
Sbjct: 363 VKTL 366
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 51/65 (78%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A ML+E ++YV+ LQ+Q
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 319 VEFLS 323
++ L+
Sbjct: 248 IQELT 252
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR A H+L+ER RR++I+E+M+ LQEL+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 272 TKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 330
Query: 321 FLSMKLATV 329
+SM V
Sbjct: 331 MMSMGCGMV 339
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD + Y++ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 319 VEFLS 323
+ LS
Sbjct: 331 YKTLS 335
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 319 VEFLSMKLA 327
+ LS A
Sbjct: 404 FKALSENRA 412
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD + Y++ LQ+Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 319 VEFLS 323
L+
Sbjct: 381 YNTLT 385
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 321 FLSMKLATVNPELNLDIERILSK 343
+ M P + + + L +
Sbjct: 373 MMWMGSGMAPPVMFPGVHQYLPR 395
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD + Y++ LQ+Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 319 VEFLS 323
L+
Sbjct: 370 YNTLT 374
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 48/62 (77%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 319 VE 320
V+
Sbjct: 348 VK 349
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 321 FLSMKLATVNPELNLDIERILSK 343
+ M P + + + L +
Sbjct: 373 MMWMGSGMAPPVMFPGVHQYLPR 395
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 16/112 (14%)
Query: 220 DEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRRE 279
DE+K+K + T +G + A+ DS+ S KR +A H L+ER RR+
Sbjct: 247 DERKRKTREETNVENQGTEEAR---DSTSS------------KRSRAAIMHKLSERRRRQ 291
Query: 280 KISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
KI+E M+ LQEL+P C K T ++ MLD++I YV+SLQ Q++ SM + P
Sbjct: 292 KINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPP 342
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+L+ER RR++I+E+M+ LQEL+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 312 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-TDKASMLDEAIEYLKTLQLQVQ 370
Query: 321 FLSM 324
+SM
Sbjct: 371 MMSM 374
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 353
Query: 321 FLSMKLATVNPELNLDIERILSK 343
+ M P + + + L +
Sbjct: 354 MMWMGSGMAPPVMFPGVHQYLPR 376
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP K T + MLD ++Y++ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 319 VEFL 322
V+ +
Sbjct: 387 VKVM 390
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A ML+E + YV+ LQ+
Sbjct: 182 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQK 241
Query: 318 QVEFLS 323
Q++ L+
Sbjct: 242 QIQELT 247
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A ML+E + YV+ LQ+
Sbjct: 83 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQK 142
Query: 318 QVEFL 322
Q+E L
Sbjct: 143 QIEEL 147
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 6/73 (8%)
Query: 257 IHMRA-----KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
+H R+ KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA ML+E I Y
Sbjct: 322 VHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEY 380
Query: 312 VQSLQQQVEFLSM 324
+++LQ QV+ +SM
Sbjct: 381 LKTLQLQVQMMSM 393
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER+R LQELVP +K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 319 VEFL 322
V+ L
Sbjct: 129 VKGL 132
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Query: 245 DSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVM 304
D + G P +RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A M
Sbjct: 167 DKLIEGSVP---CRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADM 223
Query: 305 LDEIINYVQSLQQQVEFLS 323
L+E + YV++LQ Q++ L+
Sbjct: 224 LEEAVEYVKALQGQIQELT 242
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 6/73 (8%)
Query: 257 IHMRA-----KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
+H R+ KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA ML+E I Y
Sbjct: 322 VHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEY 380
Query: 312 VQSLQQQVEFLSM 324
+++LQ QV+ +SM
Sbjct: 381 LKTLQLQVQMMSM 393
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQEL P +K T A MLD + Y++ LQ+Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 319 VEFL 322
V+ L
Sbjct: 231 VKTL 234
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A ML+E + YV+ LQ
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 243
Query: 317 QQVEFLS 323
+Q++ L+
Sbjct: 244 RQIQELT 250
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+L+ER RR++I+E+M+ LQEL+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 320
Query: 321 FLSM 324
+ M
Sbjct: 321 MMWM 324
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD + Y++ LQ+Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 319 VEFLS 323
L+
Sbjct: 256 YNTLT 260
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A ML+E + YV+ LQQ
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 318 QVEFLS 323
+++ LS
Sbjct: 234 KIQELS 239
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR + H+++ER RR++I+E+MR LQEL+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 315
Query: 321 FLSM 324
+SM
Sbjct: 316 MMSM 319
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A ML+E + YV+ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 317 QQVEFLS 323
+Q++ L+
Sbjct: 242 RQIQELT 248
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 74.7 bits (182), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD ++Y++ LQ+Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 319 VEFLS 323
+ LS
Sbjct: 90 YKTLS 94
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H +R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA +LDE I Y++SLQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQM 281
Query: 318 QVEFLSM 324
QV+ + M
Sbjct: 282 QVQIMWM 288
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR KISER+R LQELVP K T + MLD ++Y++ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 319 VEFL 322
V+ +
Sbjct: 384 VKVM 387
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 319 VEFLS 323
++ L+
Sbjct: 241 IQELT 245
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI-HMRAKRGQAT 267
+G+ ++K + + +++ T R K+ K T DS + K+ KR +A
Sbjct: 245 TGNGGELMKMIVSETEPVQRTTSLEDR-KRKGKETDDSDYLCYSTKQVRGSTSTKRSRAA 303
Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 327
H+L+ER RR++I+E+M+ LQEL+P CNK KA MLDE I Y+++LQ QV+ +SM
Sbjct: 304 EVHNLSERRRRDRINEKMKALQELIPRCNK-ADKASMLDEAIEYLKTLQLQVQMMSMGCG 362
Query: 328 TV 329
V
Sbjct: 363 MV 364
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 286
Query: 322 LSM 324
+ M
Sbjct: 287 MWM 289
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+L+ER RR++I+E+MR LQELVP CNK T KA MLDE I Y++SLQ Q++
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK-TDKASMLDEAIEYLKSLQLQLQ 291
Query: 321 FL 322
+
Sbjct: 292 VM 293
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 12/85 (14%)
Query: 245 DSSLSGEAPKEYIHMRA-----KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 299
D L+G +H R+ KR + H+L+ER RR++I+E+MR LQEL+P CNKI
Sbjct: 100 DDELAG------VHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI- 152
Query: 300 GKAVMLDEIINYVQSLQQQVEFLSM 324
KA ML+E I Y+++LQ QV+ +SM
Sbjct: 153 DKASMLEEAIEYLKTLQLQVQMMSM 177
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 275
Query: 322 LSM 324
+ M
Sbjct: 276 MWM 278
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A ML+E + YV+ LQQ
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 318 QVEFLS 323
+++ LS
Sbjct: 164 KIQELS 169
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 391
Query: 322 LSM 324
+ M
Sbjct: 392 MWM 394
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KRG+ H+++ER RR++I+E+MR LQEL+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 324
Query: 322 LS 323
+S
Sbjct: 325 MS 326
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KRG+ H+++ER RR++I+E+MR LQEL+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQM 379
Query: 322 LS 323
+S
Sbjct: 380 MS 381
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KRG+ H+++ER RR++I+E+MR LQEL+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQM 379
Query: 322 LS 323
+S
Sbjct: 380 MS 381
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 375
Query: 322 LSM 324
+ M
Sbjct: 376 MWM 378
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR + H+L+ER RR++I+E+MR LQEL+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 268
Query: 321 FLSM 324
+SM
Sbjct: 269 MMSM 272
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+L+ER RR++I+E+M+ LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 321 FLSM 324
+ M
Sbjct: 324 MMWM 327
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQ+L P +K T A MLD + Y++ LQ+Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 319 VEFL 322
V+ L
Sbjct: 410 VKTL 413
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+L+ER RR++I+E+M+ LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 321 FLSM 324
+ M
Sbjct: 324 MMWM 327
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+L+ER RR++I+E+M+ LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 332
Query: 321 FLSM 324
+ M
Sbjct: 333 MMWM 336
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 321 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQMQVQI 379
Query: 322 LSM 324
+ M
Sbjct: 380 MWM 382
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KRG+ H+++ER RR++I+E+MR LQEL+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQM 383
Query: 322 LS 323
+S
Sbjct: 384 MS 385
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+RAKRG AT+ S+AERVRR +IS+R+R LQE+VP +K T A ML+E + YV+ LQ
Sbjct: 166 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 225
Query: 317 QQVEFLS 323
+Q++ L+
Sbjct: 226 KQIQELT 232
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQEL P +K T A MLD + +++ LQ+Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 319 VEFLS 323
V+ L+
Sbjct: 397 VKTLT 401
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+++ER RR++I+E+MR LQELVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 303
Query: 322 LSM 324
+ M
Sbjct: 304 MWM 306
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+L+ER RR++I+E+M+ LQEL+P CNK KA MLDE I Y+++LQ QV+
Sbjct: 301 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-ADKASMLDEAIEYLKTLQLQVQ 359
Query: 321 FLSMKLATV 329
+SM V
Sbjct: 360 MMSMGCGMV 368
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 47/62 (75%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T + MLDE + Y++ LQ+
Sbjct: 24 RLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQK 83
Query: 318 QV 319
QV
Sbjct: 84 QV 85
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E++R LQELVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 283
Query: 322 LSMKLATV 329
+ M V
Sbjct: 284 MWMTTGIV 291
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E++R LQELVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 222 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 280
Query: 322 LSMKLATV 329
+ M V
Sbjct: 281 MWMTTGIV 288
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AERVRR +ISERMR LQ+LVP +K T + MLD ++Y++ LQ+QV
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 320 EFLS 323
+ LS
Sbjct: 93 QTLS 96
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E++R LQELVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 226 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 284
Query: 322 LSMKLATV 329
+ M V
Sbjct: 285 MWMTTGIV 292
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLDE + YV+SLQ +V
Sbjct: 6 RAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQVKV 65
Query: 320 EFLSMKLA 327
L +A
Sbjct: 66 SELQETIA 73
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQV 89
Query: 322 LSM 324
+ M
Sbjct: 90 MWM 92
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E++R LQELVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 325 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 383
Query: 322 LSMKLATV 329
+ M V
Sbjct: 384 MWMTTGIV 391
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E++R LQELVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 401 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 459
Query: 322 LSMKLATV 329
+ M V
Sbjct: 460 MWMTTGIV 467
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 11/105 (10%)
Query: 231 GANMRGKQAAKPTKDSSLSGEA--PKEYIH--MRAKRGQATNSHSLAERVRREKISERMR 286
G+ + K+ KP S + E+ PK+ + KR +A H+L+ER RR++I+E+M+
Sbjct: 20 GSAVATKETPKPLWPSDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMK 79
Query: 287 LLQELVPGCNKI-------TGKAVMLDEIINYVQSLQQQVEFLSM 324
LQEL+P CNK+ T KA MLDE I Y+++LQ QV+ +
Sbjct: 80 ALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKTLQLQVQIFVL 124
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 197 DKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEY 256
D N + P G + ++ + D+ N + G P D L +
Sbjct: 239 DTNSNIIFSAPPGGKKAKVMADGDDGMVTSFSNIDSQF-GSSLDMPGMDDYLQLQQDSVA 297
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+RAKRG AT+ S+AER RR +IS+R+R LQ+LVP +K T + MLD ++Y++ LQ
Sbjct: 298 CRVRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQ 357
Query: 317 QQVEFL 322
Q+E L
Sbjct: 358 DQIEKL 363
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 14/123 (11%)
Query: 198 KNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI 257
K V VE PS SG+ K + E Q I+ T + ++ ++ T+++ S
Sbjct: 201 KAVAVEAAGTPS---SGVCKAETEPVQ-IQPATESKLKAREETHGTEEARGSTSR----- 251
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
KR + H+LAER RREKI+E+M+ LQ+L+P CNK T K LD+ I YV+SLQ
Sbjct: 252 ----KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQS 306
Query: 318 QVE 320
Q++
Sbjct: 307 QIQ 309
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 17/126 (13%)
Query: 207 DPSGDSS-------GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSL-SGEAPKEYIH 258
+P G SS G + EQD K++ IE ++ ++D S EA K
Sbjct: 200 EPGGSSSSEEPEPVGKVAEQDRKRKGIE--------AEEWEYQSEDVDFESAEAKKNISG 251
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
KR +A H+L+ER RR++I+E+M+ LQEL+P NK + KA MLDE I+Y++SLQ Q
Sbjct: 252 SSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQ 310
Query: 319 VEFLSM 324
V+ + +
Sbjct: 311 VQRVQL 316
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 72.4 bits (176), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KRG+A H+L+ER RR++I+E+MR LQEL+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 58
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISER++ LQ+L P K T A MLD + Y++ LQQ+
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 319 VEFLS 323
V+ LS
Sbjct: 426 VKILS 430
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 72.4 bits (176), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AERVRR +ISERM+ LQ+LVP K T + MLDE + YV+SLQ +V
Sbjct: 4 RAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQMKV 63
Query: 320 EFLSMKLATV 329
+ L+ +A +
Sbjct: 64 KELTETIAQL 73
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R KR +A H+L+E+ RR KI+E+M+ LQ LVP +K T KA MLD+ I Y++ LQ QV
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKHLQLQV 103
Query: 320 EFLSMKLATVNPELNL 335
+ LSM+ P +NL
Sbjct: 104 QMLSMRNGVYRPSVNL 119
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 16/104 (15%)
Query: 220 DEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRRE 279
+++KQK + T ++G + A+ + KR +A H+LAER RRE
Sbjct: 1112 EDRKQKEREETIVEIQGTEEARGSTSR---------------KRSRAAEMHNLAERRRRE 1156
Query: 280 KISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
KI+E+M+ LQEL+P CNK T K L+++I Y++SLQ Q++ +S
Sbjct: 1157 KINEKMKTLQELIPRCNKST-KVSTLEDVIEYMKSLQMQIQMMS 1199
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 20/126 (15%)
Query: 198 KNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI 257
K V +E + PS SG+ K + E Q I+ T ++G + A+ +
Sbjct: 536 KAVVIETAETPS---SGVCKAETEPVQ-IQPATIVEIQGTEEARGS-------------- 577
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
M KR + H+LAER RREKI+E ++ LQEL+P CNK T K LD+ I YV+ LQ
Sbjct: 578 -MSRKRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKST-KVSTLDDAIEYVKWLQS 635
Query: 318 QVEFLS 323
Q++ +S
Sbjct: 636 QIQMMS 641
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR +A H+LAER RREKI+E+M+ LQEL+P CNK T K L+++I YV+SL+ Q++
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYVKSLEMQIQH 1627
Query: 322 LSMKL 326
M
Sbjct: 1628 YVMNF 1632
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR +A H+LAER RREKI+E+M+ LQEL+P CNK T K LD I YV+ LQ Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLDAAIEYVKWLQSQIQM 193
Query: 322 LSM 324
+ M
Sbjct: 194 ILM 196
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+L+ER RR++I+E+M+ LQEL+P CNK KA MLDE I Y++SLQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNK-ADKASMLDEAIEYLKSLQLQLQ 305
Query: 321 FLSM 324
+ M
Sbjct: 306 VVWM 309
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +AVMLDEI++YV+ L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEIVDYVKFLRLQ 181
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 182 VKVLSM 187
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+L+ER RR++I+E+M+ LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 250 GEAPKEYIHMR--AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
E P E + R +KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE
Sbjct: 108 AEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDE 166
Query: 308 IINYVQSLQQQVEFLSMK 325
I Y++ LQ QV+ L+M+
Sbjct: 167 AIEYLKQLQLQVQMLTMR 184
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RG AT+ S+AER RR +ISERM+ LQ+LVP +K T A MLDE + YV+ LQ QV
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
Query: 320 EFLS 323
+ LS
Sbjct: 76 KDLS 79
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR + H+L ER RR+KI++RMR+L+EL+P CNK T KA MLD+ I Y+++L+ Q++
Sbjct: 747 VKRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNK-TDKASMLDDAIEYLKTLKLQIQ 805
Query: 321 -----FLSMKLATVNP 331
F S ++A V P
Sbjct: 806 VNFKSFSSYQIAFVRP 821
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 16/107 (14%)
Query: 220 DEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRRE 279
DE+K+K + T +G + A+ + S KR +A H L+ER RR+
Sbjct: 247 DERKRKTREETNVENQGTEEARDSTSS---------------KRSRAAIMHKLSERRRRQ 291
Query: 280 KISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 326
KI+E M+ LQEL+P C K T ++ MLD++I YV+SLQ Q++ +++
Sbjct: 292 KINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQGKHLRI 337
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 6/70 (8%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI------TGKAVMLDEIINYV 312
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K T + MLDE + Y+
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYM 475
Query: 313 QSLQQQVEFL 322
+ LQ+QV+ L
Sbjct: 476 KFLQKQVDDL 485
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 69/109 (63%), Gaps = 11/109 (10%)
Query: 219 QDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRR 278
+ +KK+K+ T + G K K+ + +G P + R+ G+A H L E+ RR
Sbjct: 134 ETDKKEKVPTTTEGVVMGN---KVMKNKAPAG-GPSSW---RSHHGEA---HKLTEKRRR 183
Query: 279 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 327
KI+ER++ LQ+LVPGC+K + +A LD+ I+Y++SLQQQV+ +S+ LA
Sbjct: 184 HKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQQQVQAMSVGLA 231
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+E+MR LQEL+P C K T KA MLDE I Y++SLQ Q++
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYK-TDKASMLDEAIEYLKSLQLQLQV 241
Query: 322 LSMKLATVNPELNLDIERILSK 343
+ M + P L ++ +S+
Sbjct: 242 MWMG-GGMAPMLFPGVQHFMSR 262
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 188
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 189 VKVLSM 194
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+
Sbjct: 129 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 187
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 188 QVKVLSM 194
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
KR +A H+LAER RREKI+ERM+ LQ+L+P CNK T K ML+++I YV+SL+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQI 203
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 111/224 (49%), Gaps = 23/224 (10%)
Query: 157 SRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDK-----NVEVELQKDPSGD 211
+R+++ S ++ E++ ++ N KR P+ S L + N E + + +
Sbjct: 272 ARHITVSAKESLPDEQSEAPISRNDSKSKRIPDPTSSLEANTFRRKPNAEKYIDQLAAAT 331
Query: 212 SSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHS 271
S + ++ + T A++ K+ A P++++ E PK K+ + HS
Sbjct: 332 SICSRRASNDLTHSSLKRTNAHL--KEMASPSENADEEEEIPKS---TSTKKKRIPQVHS 386
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 331
L+ER RR+KI+++MR LQ L+P +K+ KA MLD+ I Y+++LQ Q++ +SM+ + P
Sbjct: 387 LSERKRRDKINKKMRALQALIPNSDKV-DKASMLDKAIEYLKTLQLQLQMMSMRGSCYMP 445
Query: 332 ELNL--DIERILSKDILHARSGSAATIGFSSGMNSSRPYPPGIF 373
+ + +++I + + H FS M P P +F
Sbjct: 446 PMMIPTALQQIQAPYLSH----------FSPMMGMRMPMSPSLF 479
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 120 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 178
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 179 VKVLSM 184
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 181
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 182 VKVLSM 187
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 135 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 193
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 194 VKVLSM 199
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +AT H+L+ER RR++I+++MR LQ+L+P NK+ KA ML E I+Y++SLQ QV+
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASMLGEAIDYLKSLQLQVQ 435
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 436 MMSMGTRLCMPLMML 450
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+
Sbjct: 137 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 195
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 196 QVKILSM 202
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +AT H+L+ER RR++I+++MR LQ+L+P NK+ KA ML E I+Y++SLQ QV+
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASMLGEAIDYLKSLQLQVQ 429
Query: 321 FLSMKLATVNPELNL 335
+SM P + L
Sbjct: 430 MMSMGTRLCMPLMML 444
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+
Sbjct: 136 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 194
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 195 QVKVLSM 201
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+
Sbjct: 126 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 184
Query: 318 QVEFLSM 324
QV+ LSM
Sbjct: 185 QVKVLSM 191
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H +R +A H+ +ER RR++I+E+MR LQEL+P CNK KA +LDE I Y++SLQ
Sbjct: 199 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNK-ADKASILDEAIEYLKSLQM 257
Query: 318 QVEFLSM 324
QV+ + M
Sbjct: 258 QVQVMWM 264
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R ++ H+ +ER RR+KI+E+++ LQEL+P CNK T K MLDE I+Y++SLQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 321 FLSM 324
L M
Sbjct: 73 MLVM 76
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR KI+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 80
Query: 321 FLSMK 325
LSM+
Sbjct: 81 MLSMR 85
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +IS+R++ LQ L P +K T A MLD + Y++ LQ+Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 319 VEFLS 323
V+ L+
Sbjct: 379 VQILT 383
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 242 PTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
P D L + +RAKRG AT+ S+AER RR +IS+R+R LQ+LVP +K T
Sbjct: 278 PGMDDYLQLQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNT 337
Query: 302 AVMLDEIINYVQSLQQQVEFL 322
+ MLD ++Y++ LQ Q+E L
Sbjct: 338 SDMLDIAVDYIKVLQDQIEKL 358
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +IS+R++ LQ L P +K T A MLD + Y++ LQ+Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 319 VEFLS 323
V+ L+
Sbjct: 382 VQILT 386
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H +R +A H+ +ER RR++I+E+MR LQEL+P CNK KA +LDE I Y++SLQ
Sbjct: 190 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNK-ADKASILDEAIEYLKSLQM 248
Query: 318 QVEFLSM 324
QV+ + M
Sbjct: 249 QVQVMWM 255
>gi|414876673|tpg|DAA53804.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 310
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 232 ANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLL--Q 289
++ RG P++ L + + R K+ H R+ I ++M L+ +
Sbjct: 123 SSCRGHHKNPPSEPYVLEVNRDVSFYNFRTKQ-----VHEFTARLL--DIHDKMMLINNK 175
Query: 290 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD-IERILSKD 344
E + ++ G AVML EIINYVQSLQ+QVEF+SMKLATVNP+++L+ + +L KD
Sbjct: 176 ETLDFSFQVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLNSLPNVLPKD 231
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +ISER++ LQ+L P K T A MLD + +++ LQQQ
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 319 VEFLSMKLA 327
V+ LS + A
Sbjct: 421 VQILSDRKA 429
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 154 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 212
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 213 VKVLSM 218
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
++R H+L E+ RR KI+ER++ LQ+LVPGC+K + +A LD+ I+Y++SLQQQV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSK-SNQASTLDQTIHYMKSLQQQVQ 246
Query: 321 FLSMKLA 327
+S+ LA
Sbjct: 247 AMSVGLA 253
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
H +R +A H+ +ER RR++I+E+MR LQEL+P CNK KA +LDE I Y++SLQ
Sbjct: 228 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNK-ADKASILDEAIEYLKSLQM 286
Query: 318 QVEFLSM 324
Q++ + M
Sbjct: 287 QLQIMWM 293
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISERMR LQEL P +K T A LD I ++ LQ+Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 319 VEFLS 323
V+ L+
Sbjct: 396 VKSLA 400
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 274 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
+R+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER+RR +ISER++ LQEL P +K T A ML+ + Y++ LQ+Q
Sbjct: 342 IRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQ 401
Query: 319 VEFLS 323
V+ L+
Sbjct: 402 VKTLT 406
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQ--ELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
A+R +A H+L+ER RR++I+E+MR LQ EL+P CNK T KA MLDE I Y++SLQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNK-TDKASMLDEAIEYLKSLQLQ 220
Query: 319 VEFLSM 324
+ + M
Sbjct: 221 LRVMWM 226
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 321 FLSMK 325
LSM+
Sbjct: 229 MLSMR 233
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +A H+ +ER RR++I+E+M+ LQ+LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQ 315
Query: 321 FLSMK 325
F+S++
Sbjct: 316 FMSVR 320
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 321 FLSMK 325
LSM+
Sbjct: 229 MLSMR 233
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 252 APKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 311
AP+ +R ++ + H+ +ER RR++I+E++R LQEL+P C K T K MLDE I+Y
Sbjct: 7 APRRSTPAPTRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDY 65
Query: 312 VQSLQQQVEFLSM 324
++SLQ Q++ L M
Sbjct: 66 LKSLQLQLQMLVM 78
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR ++ HSL+E+ RR++I+++MR LQEL+P C K+ K +LDE I+Y+++LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 437
Query: 321 FLSM 324
+SM
Sbjct: 438 VMSM 441
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 180 TKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 238
Query: 321 FLSMK 325
LSMK
Sbjct: 239 MLSMK 243
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R+ G+A H+L E+ RR KI+ER++ LQ+LVPGC+K + +A LD+ I+Y++SLQ QV
Sbjct: 162 RSHHGEA---HNLTEKRRRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQV 217
Query: 320 EFLSMKLAT 328
+ +S+ LA+
Sbjct: 218 QAMSVGLAS 226
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR +A H+L+E+ RR KI+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 160
Query: 322 LSMK 325
LSM+
Sbjct: 161 LSMR 164
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+ +ER RR++I+E+MR LQEL+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 591 TKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 649
Query: 321 FLSMKLATVNPEL 333
+S++ P +
Sbjct: 650 MMSIRTGMTLPPM 662
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+ +ER RR++I+E+M+ LQELVP CNK + KA +LDE I Y++SLQ QV+
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNK-SDKASILDEAIEYLKSLQLQVQI 198
Query: 322 LSM 324
+ M
Sbjct: 199 MWM 201
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
G AP+ +R ++ H+ +ER RR++I+E+++ LQEL+P C K T K MLDE I
Sbjct: 4 GSAPRRSTPPTTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAI 62
Query: 310 NYVQSLQQQVEFLSM---KLATVNPEL 333
+Y++SLQ Q++ L M V PEL
Sbjct: 63 DYLKSLQLQLQMLVMGKGMAPVVPPEL 89
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 206
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 207 VKVLSM 212
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 249 SGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
+ + P+ +KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE
Sbjct: 146 TSDRPRGGGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEA 204
Query: 309 INYVQSLQQQVEFLSMK 325
I Y++ LQ QV+ LSM+
Sbjct: 205 IEYLKQLQLQVQMLSMR 221
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R +R + H+L+E+ RREKI+++MR L+EL+P CNK+ KA MLD+ I+Y+++L+ Q+
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKV-DKASMLDDAIDYLKTLKLQL 379
Query: 320 EFLSM 324
+ +SM
Sbjct: 380 QIMSM 384
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 267 TNSHSLAERV----------------------RREKISERMRLLQELVPGCNKITGKAVM 304
T+ HS+AERV RRE+I+ERM+ LQELVP NK T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 305 LDEIINYVQSLQQQVEFLSM 324
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR KI+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 321 FLSMK 325
LSM+
Sbjct: 158 MLSMR 162
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR KI+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 321 FLSMK 325
LSM+
Sbjct: 158 MLSMR 162
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 267 TNSHSLAERV----------------------RREKISERMRLLQELVPGCNKITGKAVM 304
T+ HS+AERV RRE+I+ERM+ LQELVP NK T KA M
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 277
Query: 305 LDEIINYVQSLQQQVEFLSM 324
LDEII+YV+ LQ QV+ LSM
Sbjct: 278 LDEIIDYVKFLQLQVKVLSM 297
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+R ++ H+ +ER RR+KI+E+++ LQEL+P CNK T K MLDE I+Y++SLQ Q++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 321 FLSM 324
L M
Sbjct: 73 MLVM 76
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 83 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 141
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 142 VKVLSM 147
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
E P R KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLD+ I
Sbjct: 17 SEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAI 75
Query: 310 NYVQSLQQQVEFLSMKLATVNPELNL 335
Y++ LQ QV+ LSM+ P +NL
Sbjct: 76 EYLKQLQLQVQMLSMRNGLYLPPVNL 101
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
E P R KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLD+ I
Sbjct: 39 SEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAI 97
Query: 310 NYVQSLQQQVEFLSMKLATVNPELNL 335
Y++ LQ QV+ LSM+ P +NL
Sbjct: 98 EYLKQLQLQVQMLSMRNGLYVPPVNL 123
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+M+ LQEL+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 321 FLS 323
LS
Sbjct: 75 VLS 77
>gi|255563356|ref|XP_002522681.1| hypothetical protein RCOM_0886600 [Ricinus communis]
gi|223538157|gb|EEF39768.1| hypothetical protein RCOM_0886600 [Ricinus communis]
Length = 77
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 304 MLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGM 362
MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +I +++K+ + IG SS M
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNINNLIAKETFPPCPTNFPAIGMSSDM 59
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
++D ++S A RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ +
Sbjct: 245 SEDDNISKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DIS 303
Query: 303 VMLDEIINYVQSLQQQVEFLS 323
ML+E +NYV+ LQ Q++ LS
Sbjct: 304 TMLEEAVNYVKFLQLQIKLLS 324
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 209 SGDSSGILKEQDEKKQKI---------EQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHM 259
S D G +K KK + E NTG + + ++ ++D + S A
Sbjct: 206 SKDGQGCMKNTWSKKNQKHTSNGEEAEETNTGLDGQS-CSSNMSEDDNTSKSALNSNGKT 264
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E +NYV+ LQ Q+
Sbjct: 265 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQLQI 323
Query: 320 EFLS 323
+ LS
Sbjct: 324 KLLS 327
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 193
Query: 321 FLSMK 325
LSM+
Sbjct: 194 MLSMR 198
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
E P R KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLD+ I
Sbjct: 39 SEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAI 97
Query: 310 NYVQSLQQQVEFLSMKLATVNPELNL 335
Y++ LQ QV+ LSM+ P +NL
Sbjct: 98 EYLKQLQLQVQMLSMRNGLYLPPVNL 123
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 197
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 198 VKVLSM 203
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 267 TNSHSLAERV----------------------RREKISERMRLLQELVPGCNKITGKAVM 304
T+ HS+AERV RRE+I+ERM+ LQELVP NK T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 305 LDEIINYVQSLQQQVEFLSM 324
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 15/139 (10%)
Query: 185 KRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTK 244
+R+ ++ L ++ E + S S+ +DE ++QN GAN
Sbjct: 124 ERSKKAQKLTSSTNTTEEDGNAGLSRQSTSTYCSEDESNASLDQNGGAN---------NS 174
Query: 245 DSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVM 304
SSL+G RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + M
Sbjct: 175 RSSLNGANKS-----RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTM 228
Query: 305 LDEIINYVQSLQQQVEFLS 323
L+E + YV+ LQ Q++ LS
Sbjct: 229 LEEAVQYVKFLQLQIKLLS 247
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 321 FLSMK 325
LSM+
Sbjct: 161 MLSMR 165
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+ +ER RR++I+E+MR LQEL+P NK T KA MLDE I+Y++ LQ Q++
Sbjct: 730 TKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIDYLKILQLQLQ 788
Query: 321 FLSMKLATVNPEL 333
+S++ P +
Sbjct: 789 MMSIRTGMTLPPM 801
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 40/195 (20%)
Query: 160 VSQSYEDHQICEEAAIGVATN-----GKTRKRAPESNSLLNTDKNVEVELQK------DP 208
V ++++D + ++ I V T K R RA +TDKN + K +
Sbjct: 144 VVENHDDEESLLQSEISVTTTKSLTGSKKRSRAT------STDKNKRARVNKRAQKNVEM 197
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPT----------------KDSSLSGEA 252
SGD++ +E+ E K K +N GA M +Q + T +DSS +
Sbjct: 198 SGDNNEGEEEEGETKLKKRKN-GA-MMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDD 255
Query: 253 PKEYIHM----RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
P + +++ RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E
Sbjct: 256 PSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEA 314
Query: 309 INYVQSLQQQVEFLS 323
++YV+ LQ Q++ LS
Sbjct: 315 VHYVKFLQLQIKLLS 329
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 40/195 (20%)
Query: 160 VSQSYEDHQICEEAAIGVATN-----GKTRKRAPESNSLLNTDKNVEVELQK------DP 208
V ++++D + ++ I V T K R RA +TDKN + K +
Sbjct: 141 VVENHDDEESLLQSEISVTTTKSLTGSKKRSRAT------STDKNKRARVNKRAQKNVEM 194
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPT----------------KDSSLSGEA 252
SGD++ +E+ E K K +N GA M +Q + T +DSS +
Sbjct: 195 SGDNNEGEEEEGETKLKKRKN-GA-MMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDD 252
Query: 253 PKEYIHM----RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
P + +++ RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E
Sbjct: 253 PSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEA 311
Query: 309 INYVQSLQQQVEFLS 323
++YV+ LQ Q++ LS
Sbjct: 312 VHYVKFLQLQIKLLS 326
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 8/137 (5%)
Query: 191 NSLLNTDKNVEVELQK--DPSGDSSGILKEQDEKKQKIEQN--TGANMRGKQAAKPTKDS 246
N + T NV+++ +K + SG+S + + K ++ ++N + +M + ++D
Sbjct: 168 NKKIRTSNNVQIKSRKGTESSGNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDD 227
Query: 247 SLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLD 306
+ + +PK RA RG AT+ SL R RRE+I+ER+R+LQ+LVP K+ + ML+
Sbjct: 228 N-NNASPKP--KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLE 283
Query: 307 EIINYVQSLQQQVEFLS 323
E ++YV+ LQ Q++ LS
Sbjct: 284 EAVHYVKFLQLQIKLLS 300
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+E+M+ LQEL+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 321 FLS 323
LS
Sbjct: 75 VLS 77
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 40/195 (20%)
Query: 160 VSQSYEDHQICEEAAIGVATN-----GKTRKRAPESNSLLNTDKNVEVELQK------DP 208
V ++++D + ++ I V T K R RA +TDKN + K +
Sbjct: 144 VVENHDDEESLLQSEISVTTTKSLTGSKKRSRAT------STDKNKRARVNKRAQKNVEM 197
Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPT----------------KDSSLSGEA 252
SGD++ +E+ E K K +N GA M +Q + T +DSS +
Sbjct: 198 SGDNNEGEEEEGETKLKKRKN-GA-MMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDD 255
Query: 253 PKEYIHM----RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
P + +++ RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E
Sbjct: 256 PSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEA 314
Query: 309 INYVQSLQQQVEFLS 323
++YV+ LQ Q++ LS
Sbjct: 315 VHYVKFLQLQIKLLS 329
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR ++ HSL+E+ RR++I+++MR LQEL+P C K+ K +LDE I+Y+++LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 68
Query: 321 FLSM 324
+SM
Sbjct: 69 VMSM 72
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 8/137 (5%)
Query: 191 NSLLNTDKNVEVELQK--DPSGDSSGILKEQDEKKQKIEQN--TGANMRGKQAAKPTKDS 246
N + T NV+++ +K + SG+S + + K ++ ++N + +M + ++D
Sbjct: 168 NKKIRTSNNVQIKSRKGTESSGNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDD 227
Query: 247 SLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLD 306
+ + +PK RA RG AT+ SL R RRE+I+ER+R+LQ+LVP K+ + ML+
Sbjct: 228 N-NNASPKP--KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLE 283
Query: 307 EIINYVQSLQQQVEFLS 323
E ++YV+ LQ Q++ LS
Sbjct: 284 EAVHYVKFLQLQIKLLS 300
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 251 EAPKEYIHMR--AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
EAP + R +KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE
Sbjct: 130 EAPAKPTTSRNPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEA 188
Query: 309 INYVQSLQQQVEFLSMK 325
I Y++ LQ QV+ L+M+
Sbjct: 189 IEYLKQLQLQVQMLTMR 205
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 260 RAKRG-QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
R KR + H+L+ER RR+KI+E++R L+EL+P CNK+ KA MLD+ I+Y+++L+ Q
Sbjct: 202 RVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYLKTLKLQ 260
Query: 319 VEFLSMKLATVNP 331
++ +SM A P
Sbjct: 261 LQIMSMGRALCMP 273
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 260 RAKRG-QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
R KR + H+L+ER RR+KI+E++R L+EL+P CNK+ KA MLD+ I+Y+++L+ Q
Sbjct: 202 RVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYLKTLKLQ 260
Query: 319 VEFLSMKLATVNP 331
++ +SM A P
Sbjct: 261 LQIMSMGRALCMP 273
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 121 SKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 179
Query: 321 FL 322
+L
Sbjct: 180 YL 181
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+++E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 212
Query: 321 FLSMK 325
LSM+
Sbjct: 213 MLSMR 217
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AER RR +IS+R++ LQ+LVP +K T + MLD + Y++ LQ QV
Sbjct: 94 RAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQV 153
Query: 320 EFL 322
E L
Sbjct: 154 EKL 156
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+R ++ + H+ +ER RR++I+E++R LQEL+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 73
Query: 321 FLSM 324
L M
Sbjct: 74 MLVM 77
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS R++ LQ+L P +K T A MLD + Y++ LQ+Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 319 VEFL 322
V+ L
Sbjct: 420 VKIL 423
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR ++ H+++E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 321 FLSMK 325
LSM+
Sbjct: 251 MLSMR 255
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+K+ ++T H+L+ER RR++I+ERMR LQEL+P CNK KA MLDE I Y++SLQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNK-ADKASMLDEAIEYLKSLQLQLQ 483
Query: 321 FLSM 324
+SM
Sbjct: 484 IMSM 487
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+ R RREKI+ER++ LQ LVP K+ MLDE I+YV+ LQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQV 501
Query: 320 EFL 322
E L
Sbjct: 502 ELL 504
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +ISE++R LQELVP +K T A MLD + +++ LQ Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 319 VEFL 322
++ L
Sbjct: 201 LQAL 204
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS R++ LQ+L P +K T A MLD + Y++ LQ+Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 319 VEFL 322
V+ L
Sbjct: 416 VKML 419
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 242 PTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
P D L + +RA+RG AT+ S+AER RR +IS+R++ LQ+LVP +K T
Sbjct: 263 PGMDDYLQLQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNT 322
Query: 302 AVMLDEIINYVQSLQQQVEFL 322
+ MLD ++Y++ L+ QVE L
Sbjct: 323 SDMLDLAVDYIKELKDQVEKL 343
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA+RG AT+ S+ R RREKI+ER++ LQ LVP K+ MLDE I+YVQ LQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQV 501
Query: 320 EFL 322
L
Sbjct: 502 TLL 504
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 254 KEYIHMR-----AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
K +H R KR ++T H L ER RR++ +++MR LQ+++P C K KA +LDE
Sbjct: 210 KTQVHARIRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDILPNCYK-DDKASLLDEA 268
Query: 309 INYVQSLQQQVEFLSMKLATVNPELNLDIERILSKDILHARSGSAATIGFSSGMNSSRPY 368
+ Y+++LQ QV+ +SM + P + L + + G +G ++ S +
Sbjct: 269 VKYMRTLQHQVQMMSMGNGLIRPPMMLPMGH-------YPPMGLGMHVGAAATPTSVPQF 321
Query: 369 PPGIFQGTMPSIPGAN 384
P QGT S PG N
Sbjct: 322 LPMNIQGT--SFPGIN 335
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AERVRR +ISE+++ L+ L P +K T A MLD + Y++ LQ+Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 319 VEFLS 323
V+ L+
Sbjct: 227 VKTLT 231
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AER RR +IS+R++ LQ+LVP +K T + MLD + Y++ LQ QV
Sbjct: 310 RAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQV 369
Query: 320 EFL 322
E L
Sbjct: 370 EKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AER RR +IS+R++ LQ+LVP +K T + MLD + Y++ LQ QV
Sbjct: 310 RAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQV 369
Query: 320 EFL 322
E L
Sbjct: 370 EKL 372
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AER RR +IS+R++ LQ+LVP +K T + MLD + Y++ LQ QV
Sbjct: 157 RAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQV 216
Query: 320 EFL 322
E L
Sbjct: 217 EKL 219
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 15/99 (15%)
Query: 227 EQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMR 286
+ + G+ + +AA P + SS KR +A H+L+E+ RR KI+E+++
Sbjct: 67 QNDEGSELPSSKAAPPPRSSS--------------KRSRAAEFHNLSEKRRRSKINEKLK 112
Query: 287 LLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
LQ L+P NK T KA MLDE I Y++ LQ QV+ L ++
Sbjct: 113 ALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLMVR 150
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 212 SSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHS 271
SSG E DE E N GA+ ++K T + SG+ RA RG AT+ S
Sbjct: 227 SSGCCSE-DESNASHELNRGAS--SSLSSKGTATLNSSGKT-------RASRGAATDPQS 276
Query: 272 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
L R RRE+I+ER+R+LQ LVP K+ + ML+E + YV+ LQ Q++ LS
Sbjct: 277 LYARKRRERINERLRILQTLVPNGTKVD-ISTMLEEAVQYVKFLQLQIKLLS 327
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 228 QNTGANMRGKQAA--KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERM 285
QN GA A +P S G + +RA+RGQAT+ HS+AER+RRE+I+ERM
Sbjct: 208 QNFGAQGAATTAVMNQPQASGSNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERM 267
Query: 286 RLLQELVPGCNKI 298
+ LQELVP NK+
Sbjct: 268 KALQELVPNANKV 280
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+ERM+ LQEL+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 321 FL 322
+
Sbjct: 63 VV 64
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 51/70 (72%), Gaps = 6/70 (8%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI------TGKAVMLDEIINYVQS 314
+K+ ++T H+L+ER RR++I+ERMR LQEL+P CNK+ KA MLDE I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 315 LQQQVEFLSM 324
LQ Q++ +SM
Sbjct: 485 LQLQLQIMSM 494
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR +A H+ +ER RR+KI++RM+ LQ+LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 280 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 338
Query: 322 LS 323
+S
Sbjct: 339 MS 340
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 254 KEYIHMRA-----KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
K +H R KR ++T H L ER RR++ +++MR LQ+L+P C K KA +LDE
Sbjct: 213 KTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEA 271
Query: 309 INYVQSLQQQVEFLSMKLATVNP 331
I Y+++LQ QV+ +SM + P
Sbjct: 272 IKYMRTLQLQVQMMSMGNGLIRP 294
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 98
Query: 320 EFLSMKLATVNPELNL 335
+ LSM+ P NL
Sbjct: 99 QMLSMRNGLYLPPGNL 114
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 98
Query: 320 EFLSMKLATVNPELNL 335
+ LSM+ P NL
Sbjct: 99 QMLSMRNGLYLPPGNL 114
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 260 RAKRG-QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
RA+R + + +HSL ER RR KI+E ++ LQ+LVPGC+K +A LD+ I Y++SLQQ
Sbjct: 112 RARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQH 171
Query: 319 VEFLSM 324
V+ +S+
Sbjct: 172 VQAMSV 177
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 275 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
++RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 140 QLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 188
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 254 KEYIHMRA-----KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 308
K +H R KR ++T H L ER RR++ +++MR LQ+L+P C K KA +LDE
Sbjct: 213 KTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEA 271
Query: 309 INYVQSLQQQVEFLSMKLATVNP 331
I Y+++LQ QV+ +SM + P
Sbjct: 272 IKYMRTLQLQVQMMSMGNGLIRP 294
>gi|414876674|tpg|DAA53805.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 149
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 297 KITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLD-IERILSKD 344
++ G AVML EIINYVQSLQ+QVEF+SMKLATVNP+++L+ + +L KD
Sbjct: 33 QVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLNSLPNVLPKD 81
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 41 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKQLQLQV 99
Query: 320 EFLSMK 325
+ LSM+
Sbjct: 100 QMLSMR 105
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RGQAT+ HS+AER+RRE+I+ER+R LQELVP +K T +A M+DEI++YV+ L+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMIDEIVDYVKFLRLQ 208
Query: 319 VEFLSM 324
V+ LSM
Sbjct: 209 VKVLSM 214
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 242 PTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 301
P D L + +RA+RG AT+ S+AER RR +IS+R++ LQ+LVP +K T
Sbjct: 135 PGMDDYLQLQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNT 194
Query: 302 AVMLDEIINYVQSLQQQVEFL 322
+ MLD + Y++ L+ QVE L
Sbjct: 195 SDMLDLAVEYIKELKDQVEKL 215
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
++R +A H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 243 SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQ 301
Query: 321 FLSMKLATVNPELN--LDIERILSKDILHARSGSAATIGFSSGM 362
+S++ P++ L +++ L +L AR G ++G GM
Sbjct: 302 AMSVRNM---PQMMMPLGMQQQLQMSLL-ARMGMGVSLGMGMGM 341
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 227 EQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMR 286
E N G K+ + +K +L+G+ RA RG AT+ SL R RRE+I+ER+R
Sbjct: 212 ESNGGDTFLSKEDGEDSKALNLNGKT-------RASRGAATDPQSLYARKRRERINERLR 264
Query: 287 LLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
+LQ LVP K+ + ML+E + YV+ LQ Q++ LS
Sbjct: 265 ILQHLVPNGTKV-HISTMLEEAVQYVKFLQLQIKLLS 300
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR +A H+ +ER RR+KI++RM++LQ+LVP +K T KA MLDE+I Y++ LQ QV
Sbjct: 212 KRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVSM 270
Query: 322 LS 323
+S
Sbjct: 271 MS 272
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 42 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 100
Query: 320 EFLSMKLATVNPELNL 335
+ LSM+ P NL
Sbjct: 101 QMLSMRNGLYLPPGNL 116
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+ER RR++I+ERM+ LQEL+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 321 FL 322
+
Sbjct: 63 VV 64
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 227 EQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMR 286
E N G K+ + +K +L+G+ RA RG AT+ SL R RRE+I+ER+R
Sbjct: 212 ESNGGDTFLSKEDGEDSKALNLNGKT-------RASRGAATDPQSLYARKRRERINERLR 264
Query: 287 LLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
+LQ LVP K+ + ML+E + YV+ LQ Q++ LS
Sbjct: 265 ILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 300
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+R ++ + H+ +ER RR++I+E+++ LQEL+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 74
Query: 321 FLSM---KLATVNPEL 333
L M V PEL
Sbjct: 75 MLVMGKGMAPVVPPEL 90
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 227 EQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMR 286
E N G K+ + +K +L+G+ RA RG AT+ SL R RRE+I+ER+R
Sbjct: 212 ESNGGDTFLSKEDGEDSKALNLNGKT-------RASRGAATDPQSLYARKRRERINERLR 264
Query: 287 LLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
+LQ LVP K+ + ML+E + YV+ LQ Q++ LS
Sbjct: 265 ILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 300
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AER RR +IS +++ LQELVP +K T A MLD + +++ LQ QV
Sbjct: 232 RAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQV 291
Query: 320 EFL 322
E L
Sbjct: 292 ESL 294
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+RAKRG AT+ S+AER RR +ISE++R LQ LVP +K T + MLD +++++ LQ
Sbjct: 283 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQ 342
Query: 317 QQVEFL 322
Q++ L
Sbjct: 343 SQLQTL 348
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AER RR +IS +++ LQELVP +K T A MLD + +++ LQ QV
Sbjct: 234 RAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQV 293
Query: 320 E 320
E
Sbjct: 294 E 294
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 65.9 bits (159), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 35/39 (89%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 297
+RA+RGQAT+ HS+AER+RREKI+ERM+ LQELVP NK
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR ++ H+++E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 321 FLSMK 325
LSM+
Sbjct: 251 MLSMR 255
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+ +ER RR+KI++RM+ LQ+LVP NK T KA MLDE+I Y++ LQ QV+
Sbjct: 290 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQVQ 347
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 157 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 215
Query: 321 FLSMK 325
LS++
Sbjct: 216 MLSLR 220
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+ +ER RR+KI++RM+ LQ+LVP NK T KA MLDE+I Y++ LQ QV+
Sbjct: 290 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQVQ 347
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R KR + H+L+E+ RREKI+++MR L++L+P CNK+ KA MLD+ I+Y+++L+ Q+
Sbjct: 331 RVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKV-DKASMLDDAIDYLKTLKLQL 389
Query: 320 E 320
+
Sbjct: 390 Q 390
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 9/87 (10%)
Query: 245 DSSLSGEAPKEYIHM---------RAKRGQATNSHSLAERVRREKISERMRLLQELVPGC 295
+SSL +Y+ M RAKRG AT+ S+AER RR +IS+R++ LQ+LVP
Sbjct: 258 NSSLEMSGMDDYLQMQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNM 317
Query: 296 NKITGKAVMLDEIINYVQSLQQQVEFL 322
+K T + MLD ++Y++ L+ +VE L
Sbjct: 318 DKQTNTSDMLDLAVDYIKELKDRVEKL 344
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AER RR +IS +++ LQELVP +K T A MLD + +++ LQ QV
Sbjct: 232 RAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQV 291
Query: 320 E 320
E
Sbjct: 292 E 292
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR +A H+ +ER RR+KI++RM+ LQ+LVP +K T KA MLDE+I Y++ LQ QV
Sbjct: 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVSM 268
Query: 322 LS 323
+S
Sbjct: 269 MS 270
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+AER RR +IS +++ LQELVP +K T A MLD + +++ LQ QV
Sbjct: 234 RAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQV 293
Query: 320 E 320
E
Sbjct: 294 E 294
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR ++ H+++E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 321 FLSMK 325
LSM+
Sbjct: 251 MLSMR 255
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 321 FLSMK 325
LS +
Sbjct: 211 MLSAR 215
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR +A H+ +ER RR+KI++RM+ LQ+LVP +K T KA MLDE+I Y++ LQ QV
Sbjct: 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVSM 268
Query: 322 LS 323
+S
Sbjct: 269 MS 270
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 188 RANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 246
Query: 320 EFLS 323
+ LS
Sbjct: 247 KLLS 250
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 188 RANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 246
Query: 320 EFLS 323
+ LS
Sbjct: 247 KLLS 250
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 288 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 346
Query: 320 EFLS 323
+ LS
Sbjct: 347 KLLS 350
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 266 RASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 324
Query: 320 EFLS 323
+ LS
Sbjct: 325 KLLS 328
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 288 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 346
Query: 320 EFLS 323
+ LS
Sbjct: 347 KLLS 350
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+ +ER RR++I+E+MR LQ+L+P NK T KA ML+E I Y++SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 321 FLSM 324
+ M
Sbjct: 415 VMWM 418
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ+LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQI 296
Query: 320 EFLS 323
+ LS
Sbjct: 297 KLLS 300
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +ISE++R LQ LVP +K T + MLD +++++ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 319 VEFL 322
++ L
Sbjct: 194 LQTL 197
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 11/103 (10%)
Query: 221 EKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREK 280
E+ E+N+G A+K T + +G+A RA RG AT+ SL R RREK
Sbjct: 170 EEHNMYEENSGGTT---SASKSTMSLNSNGKA-------RANRGSATDPQSLYARKRREK 219
Query: 281 ISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
I+ER+R LQ LVP K+ + ML++ I+YV+ LQ Q++ LS
Sbjct: 220 INERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQIKLLS 261
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
G A + RA++G A + S+A RVRRE+ISER+++LQ L+P +K+ ML++ I
Sbjct: 745 GPALNTNLKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAI 803
Query: 310 NYVQSLQQQVEFL 322
YVQ L+ Q++ L
Sbjct: 804 TYVQCLELQIKML 816
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR H+L+E+ RR KI+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 322 LS---------MKLATVNPELNLDIERILSKDI 345
L+ M+L V P + I L +D+
Sbjct: 149 LAVMNGLGLNPMRLPQVPPPTHTRINETLEQDL 181
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR H+L+E+ RR KI+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 90 KRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 322 LS---------MKLATVNPELNLDIERILSKDI 345
L+ M+L V P + I L +D+
Sbjct: 149 LAVMNGLGLNPMRLPQVPPPTHTRINETLEQDL 181
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR H+L+E+ RR KI+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 322 LS---------MKLATVNPELNLDIERILSKDI 345
L+ M+L V P + I L +D+
Sbjct: 149 LAVMNGLGLNPMRLPQVPPPTHTRINETLEQDL 181
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
+ RA RG AT+ SL R RRE+I+ER+R+LQ+LVP K+ + ML+E YV+ LQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAAQYVKFLQL 247
Query: 318 QVEFLS 323
Q++ LS
Sbjct: 248 QIKLLS 253
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA++G A + S+A R RRE+IS+R+++LQELVP K+ ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 320 EFLS 323
+ L+
Sbjct: 418 KVLT 421
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+ A +H+L E+ RR KI+ER R LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 251
Query: 322 LS 323
S
Sbjct: 252 TS 253
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
G A + RA++G A + S+A RVRRE+ISER+++LQ L+P +K+ ML++ I
Sbjct: 630 GPALNTNLKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAI 688
Query: 310 NYVQSLQQQVEFL 322
+YVQ L+ Q++ L
Sbjct: 689 SYVQCLEFQIKML 701
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 11/103 (10%)
Query: 221 EKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREK 280
E+ E+N+G A+K T + +G+A RA RG AT+ SL R RREK
Sbjct: 156 EEHNMYEENSGGTT---SASKSTMSLNSNGKA-------RANRGSATDPQSLYARKRREK 205
Query: 281 ISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
I+ER+R LQ LVP K+ + ML++ I+YV+ LQ Q++ LS
Sbjct: 206 INERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQIKLLS 247
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
++R +H+L E+ RR KI+ER++ LQ++VPGC+K + +A LD+ I+Y++SLQ QV+
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 230
Query: 321 FLS 323
+S
Sbjct: 231 AMS 233
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+ A +H+L E+ RR KI+ER R LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 322 LS 323
S
Sbjct: 139 TS 140
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
A H+L+E+ RR KI+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 142
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+ +ER RR+KI++RM+ LQ+LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 266 TKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 324
Query: 321 FL 322
+
Sbjct: 325 MM 326
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 208 PSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQAT 267
P+G + +D+ + E N G KP RA RG AT
Sbjct: 213 PNGQCTSSFSSEDDCNEAQENNGGITSSSTSNGKP-----------------RASRGSAT 255
Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E + YV+ LQ Q++ LS
Sbjct: 256 DPQSLYARKRRERINERLRILQSLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 310
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS R++ LQ+LVP +K T A MLD + +++ LQ +
Sbjct: 299 IRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGE 358
Query: 319 VEFLSMKL 326
V+ L +L
Sbjct: 359 VQKLHKEL 366
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQELVP +K T + MLD + +++ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 319 VEFL 322
++ L
Sbjct: 352 IQVL 355
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +ISE++R LQELVP +K T A MLD + +++ LQ Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 319 VEFL 322
++ L
Sbjct: 87 LQAL 90
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +ISE++R LQ+LVP +K T A MLD + +++ LQ +
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 319 VEFL 322
++ L
Sbjct: 322 LQAL 325
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ S+ R RRE+I+ER+R+LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 208 RASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 266
Query: 320 EFLS 323
+ LS
Sbjct: 267 KLLS 270
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+ +ER RR++I+E+MR LQEL+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 77
Query: 321 FLSM 324
++
Sbjct: 78 VCAV 81
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 11/85 (12%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E +NYV+ LQ Q+
Sbjct: 275 RASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKV-DISTMLEEAVNYVKFLQTQI 333
Query: 320 EFLSMKLATVNPELNLDIERILSKD 344
K+ T+ DI +LS D
Sbjct: 334 -----KVCTIG-----DIIYLLSSD 348
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R KR +A H+L+ER RR++I+E+MR LQEL+P NK T KA MLDE I Y++ LQ Q+
Sbjct: 12 RPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQL 70
Query: 320 EFLSMKL 326
+ ++L
Sbjct: 71 QVPKIEL 77
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 240
Query: 322 LSMK 325
+S++
Sbjct: 241 MSVR 244
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 278
Query: 322 LSMK 325
+S++
Sbjct: 279 MSVR 282
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 152
Query: 320 EFLS 323
+ LS
Sbjct: 153 KLLS 156
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 316
+RAKRG AT+ S+AER RR +ISE++R LQ LVP +K T A MLD +++++ LQ
Sbjct: 144 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQ 203
Query: 317 QQVEFL 322
+++ L
Sbjct: 204 SELQAL 209
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA++G A + S+A RVRRE+ISER+++LQ L+P +K+ ML++ I+YVQ L+ Q+
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAISYVQCLEFQI 881
Query: 320 EFL 322
+ L
Sbjct: 882 KML 884
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
++R +H+L E+ RR KI+ER + LQ++VPGC+K + +A LD+ I+Y++SLQ QV+
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 233
Query: 321 FLS 323
+S
Sbjct: 234 AMS 236
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +ISE++R LQ LVP +K T A MLD +++++ LQ +
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 319 VEFL 322
++ L
Sbjct: 203 LQAL 206
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 246
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 227 EQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMR 286
E N+ RG++++ SL+ A K R+ RG AT+ SL R RRE+I+ER++
Sbjct: 196 ESNSSHEPRGRESSSL----SLNDSAAKLSGKSRSSRGPATDPQSLYARKRRERINERLK 251
Query: 287 LLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
+LQ LVP K+ + ML+E + YV+ LQ Q++ LS
Sbjct: 252 ILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 287
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
++R +A H+ +ER RR++I+E+MR LQ+L+P NK T KA ML+E I Y++SLQ Q++
Sbjct: 356 SRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 321 FLSM 324
+ M
Sbjct: 415 VMWM 418
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 208 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQ 267
Query: 319 VEFL 322
V+ L
Sbjct: 268 VQKL 271
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
+RAKRG AT+ S+AERVRR +IS+R+R LQELVP +K T A MLDE +
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAV 242
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT- 328
H+ +ER RR++I+E+++ LQEL+P C K T K MLDE I+Y++SLQ Q++ L M T
Sbjct: 22 HNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQIQLQMLVMGKGTA 80
Query: 329 --VNPELNLDIERILS 342
V PEL + I S
Sbjct: 81 PVVPPELQQYMHYITS 96
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 245 DSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVM 304
DS +S EA RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + M
Sbjct: 224 DSKVS-EALNSKGKARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTM 281
Query: 305 LDEIINYVQSLQQQVEFLS 323
L+E + YV+ LQ Q++ LS
Sbjct: 282 LEEAVQYVKFLQLQIKLLS 300
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +ISE++R LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 319 VEFL 322
++ +
Sbjct: 301 LQAM 304
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 277 RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
RR++I+E+MR LQEL+P CNKI KA MLDE I Y+++LQ QV+ +SM
Sbjct: 12 RRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQMMSM 58
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+++LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 260 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQI 318
Query: 320 EFLS 323
+ LS
Sbjct: 319 KLLS 322
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+++LQ LVP K+ + ML+E ++YV LQ Q+
Sbjct: 273 RATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVHYVNFLQLQI 331
Query: 320 EFLS 323
+ LS
Sbjct: 332 KLLS 335
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+++LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 256 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQI 314
Query: 320 EFLS 323
+ LS
Sbjct: 315 KLLS 318
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+++LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 255 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQI 313
Query: 320 EFLS 323
+ LS
Sbjct: 314 KLLS 317
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T A MLD + +++ LQ +
Sbjct: 279 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 338
Query: 319 VEFLSMKL 326
V+ L+ +L
Sbjct: 339 VQKLNKEL 346
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
+A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 325 K 325
+
Sbjct: 235 R 235
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR H+L+E+ RR KI+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 86 KRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 144
Query: 322 LS---------MKLATVNPELNLDIERILSKDI 345
L+ M+L V P + I L +D+
Sbjct: 145 LAVMNGLGLNPMRLPPVLPPTHTRINETLEQDM 177
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T A MLD + +++ LQ +
Sbjct: 332 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 391
Query: 319 VEFLSMKL 326
V+ L+ +L
Sbjct: 392 VQKLNKEL 399
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR H+L+E+ RR KI+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 89 KRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 147
Query: 322 LS---------MKLATVNPELNLDIERILSKD 344
L+ M+L V P+ I L +D
Sbjct: 148 LAVMNGLGLNPMQLPPVLPQTQTRINETLEQD 179
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
+A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 325 K 325
+
Sbjct: 256 R 256
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 329
H+L+E+ RR +I+E+M+ LQ LVP +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 70 HNLSEKRRRCRINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKQLQLQVQMLSMRNGLY 128
Query: 330 NPELNLDI 337
P++NL +
Sbjct: 129 LPQVNLPV 136
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQELVP +K T + MLD + +++ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 319 VEFL 322
++ L
Sbjct: 352 IQKL 355
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 13/96 (13%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R +RG AT+ S+ R RREKI+ER+R LQ L+P K+ MLDE ++YVQ L++QV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQV 506
Query: 320 EFLSMKLATVNPELNL-------DIERILSKDILHA 348
+ A P+ + +I R+L D+ HA
Sbjct: 507 ---TQSDADGGPDFEICVANAASEIRRVL--DVRHA 537
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA +G AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 225 RASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 283
Query: 320 EFLS 323
+ LS
Sbjct: 284 KLLS 287
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T A ML+ + +++ LQ +
Sbjct: 263 IRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNE 322
Query: 319 VEFLSMKL 326
VE L +L
Sbjct: 323 VEKLHKEL 330
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+ R RRE+I+ER++ LQ LVP K+ ML+E I+YV+ LQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKV-DIVTMLEEAIHYVKFLQLQV 270
Query: 320 EFLS 323
LS
Sbjct: 271 NMLS 274
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA++G A + S+A RVRRE+ISER+++LQ L+P +K+ ML++ I YVQ L+ Q+
Sbjct: 49 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAITYVQCLELQI 107
Query: 320 EFL 322
+ L
Sbjct: 108 KML 110
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 219 QDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRR 278
Q E Q + T N +P D+ L G+A +A R AT S SL R RR
Sbjct: 178 QREDGQSLSSCTFENDSNASQGRPVSDN-LGGKA-------KADRRSATESQSLYARKRR 229
Query: 279 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
E+I+ER+R+LQ LVP K+ + ML+E + YV+ LQ Q++ LS
Sbjct: 230 ERINERLRILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQIKLLS 273
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|223942973|gb|ACN25570.1| unknown [Zea mays]
gi|413951549|gb|AFW84198.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 156
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Query: 304 MLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI--ERILSKDI 345
MLDEIINYVQSLQ+QVEFLSMKLATVNP+L+ + +L KDI
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDI 44
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
+A H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 325 K 325
+
Sbjct: 256 R 256
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT SL R RRE+I+ER+R+LQ LVP K+ + ML+E YV+ LQ Q+
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 253
Query: 320 EFLS 323
+ LS
Sbjct: 254 KLLS 257
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P + RA G AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E + YV
Sbjct: 258 PNLHRKSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYV 316
Query: 313 QSLQQQVEFLS 323
+ LQ Q++ LS
Sbjct: 317 KFLQLQIKLLS 327
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+R+LQ LVP K+ + ML+E YV+ LQ Q+
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 255
Query: 320 EFLS 323
+ LS
Sbjct: 256 KLLS 259
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 199
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 264 GQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
GQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 324 M 324
M
Sbjct: 186 M 186
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R++RG AT+ S+ R RREKI+ER+++LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 305
Query: 320 EFLS 323
+ LS
Sbjct: 306 KLLS 309
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 182
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 11/89 (12%)
Query: 250 GEAPKE-YIHMRAKRGQATNS--------HSLAERVRREKISERMRLLQELVPGCNKITG 300
GE P E Y + R +N H +ER RR+KI++RM+ LQ+LVP +K T
Sbjct: 210 GEVPDEDYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSK-TD 268
Query: 301 KAVMLDEIINYVQSLQQQVEFLS-MKLAT 328
KA MLDE+I Y++ LQ QV+ ++ MK+ T
Sbjct: 269 KASMLDEVIQYMKQLQAQVQMMNWMKMYT 297
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAK+G A + S+A R RRE+IS+R+++LQEL+P +K+ ML++ INYV+ LQ QV
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQV 467
Query: 320 EFL 322
+ L
Sbjct: 468 KVL 470
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA++G A + S+A R RRE+IS+R+++LQELVP K+ ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 320 E 320
+
Sbjct: 418 K 418
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAK+G A + S+A R RRE+IS+R+++LQEL+P +K+ ML++ INYV+ LQ QV
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQV 467
Query: 320 EFL 322
+ L
Sbjct: 468 KVL 470
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER++ LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 275
Query: 320 EFLS 323
+ LS
Sbjct: 276 KLLS 279
>gi|357504213|ref|XP_003622395.1| BHLH transcription factor [Medicago truncatula]
gi|355497410|gb|AES78613.1| BHLH transcription factor [Medicago truncatula]
Length = 141
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 277 RREKISERMRLLQELVPGCNK-ITGKAVMLDEIINYVQSLQQQVE 320
RREKISER+++L++LVP K + GK +ML EIINY+QSLQ QVE
Sbjct: 60 RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVE 104
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 319 VEFL 322
++ L
Sbjct: 343 LQNL 346
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 319 VEFL 322
++ L
Sbjct: 343 LQNL 346
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMK 325
H+L+E+ RR +I+E+M+ LQ L+P NK T KA MLDE I Y++ LQ QV+ LS++
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSLR 170
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
H+ +ER RR++I+E+++ LQEL+P C K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQMLVM 71
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
EAPK RA AT++ S+ R RRE+I+ER+R+LQ LVP K+ + ML+E +
Sbjct: 188 EAPKLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQ 246
Query: 311 YVQSLQQQVEFLS 323
YV+ LQ Q++ LS
Sbjct: 247 YVKFLQLQIKLLS 259
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 278 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 337
Query: 319 VEFL 322
++ L
Sbjct: 338 LQNL 341
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
AKR +A H+ +ER RR++I+E+MR LQEL+P NK T KA ML+E I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLEEAIEYLKMLQLQLQ 77
Query: 321 F 321
Sbjct: 78 V 78
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 265 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQ 324
Query: 319 VEFLSMKL 326
V+ L L
Sbjct: 325 VQKLHEDL 332
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 44/61 (72%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A+R +H+L E+ RR KI ++++ L++LVPGC+ + +A +LD+ I +++SLQQQ++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
Query: 321 F 321
Sbjct: 79 V 79
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 274 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 333
Query: 319 VEFL 322
++ L
Sbjct: 334 LQNL 337
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
P + +H+ ++G + RR++I E+MR LQEL+P CNK T KA +LDE I Y+
Sbjct: 177 PSDSVHVHKRKGMCRDESDSRSERRRDRIKEKMRALQELIPHCNK-TDKASILDETIEYL 235
Query: 313 QSLQQQVEFLSMKLATV 329
+SLQ QV+ + M V
Sbjct: 236 KSLQMQVQIMWMTSGMV 252
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+R +A H+L+ER RR++I+ERM+ LQEL+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 250 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQ 308
Query: 321 FLSM 324
+ M
Sbjct: 309 VMWM 312
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 243 TKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
+++S+ +G PK RA RG +T+ SL R RRE+I+ER++ LQ LVP K+ +
Sbjct: 201 SQESADTGVCPKG--KARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKV-DMS 257
Query: 303 VMLDEIINYVQSLQQQVEFLS 323
ML+E ++YV+ LQ Q++ LS
Sbjct: 258 TMLEEAVHYVKFLQLQIKVLS 278
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+ +ER RR+KI++RM+ LQ+LVP +K + KA MLDE+I Y++ LQ Q++
Sbjct: 266 TKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-SDKASMLDEVIEYLKQLQAQLQ 324
Query: 321 FL 322
+
Sbjct: 325 MI 326
>gi|302767438|ref|XP_002967139.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
gi|300165130|gb|EFJ31738.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
Length = 110
Score = 61.6 bits (148), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RG AT+ S+AERVRR KISE ++ L +LVP +K T A ML+ + Y++ L+++
Sbjct: 44 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 103
Query: 319 VE 320
+E
Sbjct: 104 IE 105
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR H+L+E+ RR KI+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 89 KRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYMKQLQLQVQT 147
Query: 322 LSM 324
L++
Sbjct: 148 LAV 150
>gi|4678267|emb|CAB41175.1| putative protein [Arabidopsis thaliana]
Length = 137
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 298 ITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDIERILSKD 344
I G A++LDEIIN+VQSLQ+QVE LSM+LA VNP ++ +++ IL+ +
Sbjct: 1 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 47
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 254 KEYIHMRAKRGQATNS---HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
+E + +R KR S S+A R RRE+IS+R+R+LQ VPG K+ A MLDE I+
Sbjct: 374 EEIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKM-DTASMLDEAIH 432
Query: 311 YVQSLQQQVEFL 322
YV+ LQQQ++ L
Sbjct: 433 YVKFLQQQLQTL 444
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA +G AT+ SL R RREKI+ER++ LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 226
Query: 320 EFLS 323
+ LS
Sbjct: 227 KLLS 230
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RA+RG AT+ S+AERVRR KISE ++ L +LVP +K T A ML+ + Y++ L+++
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 319 VEFLSMKL 326
+E + +L
Sbjct: 617 IEQMKEEL 624
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
+RAKRG AT+ S+AER RR +IS +++ LQ+LVP +K T A MLD + +++ LQ +
Sbjct: 77 IRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQHIKGLQNE 136
Query: 319 VEFLSMKL 326
VE L ++
Sbjct: 137 VEKLHKEM 144
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA +G AT+ SL R RREKI+ER++ LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 226
Query: 320 EFLS 323
+ LS
Sbjct: 227 KLLS 230
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 222 KKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKI 281
K+ +QNT + ++ + SS A + R+++G A + S+A R RRE+I
Sbjct: 196 KRSADDQNTTNALSKREKIDSSPASSCCTTALNTNLKPRSRQGTANDPQSIAARQRRERI 255
Query: 282 SERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
S+R+++LQ+LVP +K+ ML++ INYV+ +Q Q++
Sbjct: 256 SQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQLQ 293
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
S+A R RRE+ISERMR+LQ LVPG K+ A MLDE I+YV+ L++QV+ L
Sbjct: 169 SVAARHRRERISERMRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQSL 219
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+R +A H+L+ER RR++I+ERM+ LQEL+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 256 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQ 314
Query: 321 FLSM 324
+ M
Sbjct: 315 VMWM 318
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSK-TDKASMLDEAIEYLKLLQLQVQ 192
Query: 321 FLSMKLATV 329
LS++ +
Sbjct: 193 GLSVRFLEI 201
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+ERM+ LQEL+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 311
Query: 322 LSM 324
+ M
Sbjct: 312 MWM 314
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
KR +A H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I+Y++ LQ QV+
Sbjct: 272 KRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQVQV 330
>gi|414883946|tpg|DAA59960.1| TPA: hypothetical protein ZEAMMB73_491228 [Zea mays]
Length = 379
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 23/69 (33%)
Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDI 337
R+KISERM+LLQ+LVP C+K FLS KLATVNPEL DI
Sbjct: 330 RKKISERMKLLQDLVPECSK-----------------------FLSTKLATVNPELGFDI 366
Query: 338 ERILSKDIL 346
E+I+SK +L
Sbjct: 367 EQIISKQML 375
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 173 AAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGA 232
A +G + + ++ P + + D V ++K P+G S K + ++ +
Sbjct: 136 ATMGTSRDTDKEEKVPTTTEGVMMDNKV---MRKAPAGGPS--RKSHHGEAHRLTEKRAV 190
Query: 233 NMR--GKQAAKPTKDSSL-SGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQ 289
R G+ T + L +G P RA+R RR KI+ER++ LQ
Sbjct: 191 PCRAAGRGVGPSTAHNVLWAGPGPVRIGPCRAQR-------------RRHKINERLKTLQ 237
Query: 290 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 328
+LVPGC+K + +A LD+ I+Y++SLQ QV+ +S+ LA+
Sbjct: 238 QLVPGCSK-SNQASTLDQTIHYMKSLQHQVQAMSVGLAS 275
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+ R RRE+I+ER+R LQ LVP K+ ML+E INYV+ LQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKV-DIVTMLEEAINYVKFLQLQL 296
>gi|223950383|gb|ACN29275.1| unknown [Zea mays]
gi|414869404|tpg|DAA47961.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414869405|tpg|DAA47962.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 347
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
+RAKRG AT+ S+AERVRR KISER+R LQELVP +K+T A
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKVTAPA 340
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 222 KKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKI 281
K+ +QNT ++ + SS A + R+++G A + S+A R RRE+I
Sbjct: 196 KRSADDQNTTNAFSKREKIDSSPASSCCTTALNTNLKPRSRQGTANDPQSIAARQRRERI 255
Query: 282 SERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
S+R+++LQ+LVP +K+ ML++ INYV+ +Q Q++
Sbjct: 256 SQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQLQ 293
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
S+A R+RRE+ISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 121 SIAARLRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+R +A H+L+ER RR++I+ERM+ LQEL+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 321 FLSM 324
+ M
Sbjct: 311 VMWM 314
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
S+A R RR+KISER+R+L++L+PG NK+ A MLDE I YV+ LQ QV+ L
Sbjct: 391 QSVAARHRRKKISERIRVLEKLIPGGNKM-DTATMLDEAIEYVKFLQLQVQIL 442
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+R +A H+L+ER RR++I+ERM+ LQEL+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 321 FLSM 324
+ M
Sbjct: 311 VMWM 314
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
+R +A H+L+ER RR++I+ERM+ LQEL+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 321 FLSM 324
+ M
Sbjct: 311 VMWM 314
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA RG AT+ SL R RRE+I+ER+++LQ +VP K+ + ML+E ++YV+ LQ Q+
Sbjct: 271 RASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKV-DISTMLEEAVHYVKFLQLQI 329
Query: 320 E 320
+
Sbjct: 330 K 330
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
++R +A H+L+ER RRE+I+E+M+ LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 347 SRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 405
Query: 321 FLSM 324
+ M
Sbjct: 406 VMWM 409
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
R KR +A H+L+E+ RR +I+E+M+ LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 320 EFL 322
+ +
Sbjct: 86 QMI 88
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 330
++A R+RRE++SER+R+LQ+LVPG +K+ A MLDE +Y++ L+ QV+ L L T N
Sbjct: 298 TVAARLRRERVSERLRVLQKLVPGGSKMD-TASMLDEAASYLKFLKSQVQALE-TLGTTN 355
Query: 331 --PELNLDIERILSKDILHARSGS---AATIGFSSGMNSSRPYPPGI 372
N S+ + SGS +GF++G +S+ P G+
Sbjct: 356 DTSTSNSTATASRSQQYNYYSSGSNNPGGFLGFAAGRSSNMISPAGM 402
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
H+L+E+ RR KI+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ QV+ L++
Sbjct: 109 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQALAV 162
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RAKRG AT+ S+ R RREKI+ER++ LQ LVP ++ ML+E I++V+ L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQV-DIVTMLEEAIHFVKFLEFQL 529
Query: 320 EFL 322
E L
Sbjct: 530 ELL 532
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 257 IHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
+ +RAKRG AT+ S+AERVRR KISERMR LQ+LVP +KI + +
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKICWTWLWI 378
>gi|359478406|ref|XP_002282999.2| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 411
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 259 MRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 305
+RAKRG AT+ S+AERVRR +ISERMR LQELVP +K+ L
Sbjct: 360 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKVESSLAFL 406
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 180 NGKTRKRAPE-SNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQ 238
N K+RK + S S D+++ +++Q++ S S Q + +E N GA K
Sbjct: 204 NAKSRKNSKSASTSNDEDDRSLSLQVQRNNSCFS------QSDSNAYLEPNGGA---SKD 254
Query: 239 AAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
A P D RA A + SL R RRE+I+ER+R+LQ LVP K+
Sbjct: 255 PAPPNLDR-----------KSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKV 303
Query: 299 TGKAVMLDEIINYVQSLQQQVEFLS 323
+ ML+E + YV+ LQ Q++ LS
Sbjct: 304 -DISTMLEEAVQYVKFLQLQIKLLS 327
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+ERM+ LQEL+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 322 L 322
+
Sbjct: 313 M 313
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+ERM+ LQEL+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 322 L 322
+
Sbjct: 313 M 313
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+ERM+ LQEL+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 322 L 322
+
Sbjct: 313 M 313
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 321
+R +A H+L+ER RR++I+ERM+ LQEL+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 233 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 291
Query: 322 L 322
+
Sbjct: 292 M 292
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 260 RAKRGQA-TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 318
R KR +HSL E+ RR KI E+++ LQ+LVPGC + +A LD+ I Y++SLQQ
Sbjct: 156 RGKRSHHHAEAHSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQASTLDQTIRYIKSLQQH 215
Query: 319 V 319
+
Sbjct: 216 I 216
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
H+ +ER RR+KI++RM+ LQ+LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 287 HNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 336
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 324
+H ++ + RR++I+E+++ LQEL+P C K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 143 AHLVSRKRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQMLVM 197
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 58.5 bits (140), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 264 GQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
G AT+ S+ R RREKI+ER+R LQ L+P K+ MLDE ++YVQ L++QV L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKVD-IVTMLDEAVHYVQFLKRQVTLL 58
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
S+A R RRE+ISE++R+LQ LVPG K+ A MLDE I+YV+ L++Q+ L
Sbjct: 137 SVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKRQIRLL 187
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
+++ ++A R+RRE++SER+R+LQ LVPG +K+ A MLDE +Y++ L+ Q+E L
Sbjct: 276 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATMLDEAASYLKFLKSQLEAL 331
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
A H+ +ER RR+KI++RM+ LQ+LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 29 AAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 82
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
S+A R RR+KISER+R+L++L+PG NK+ A MLDE I YV+ LQ QV+ L
Sbjct: 19 QSVAARHRRKKISERIRVLEKLIPGGNKM-DTATMLDEAIEYVKFLQLQVQIL 70
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
++A R+RRE++S+R+R+LQ+LVPG NK+ A MLDE +Y++ L+ QV+ L
Sbjct: 288 TVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEAASYLKFLKSQVQKL 338
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
++A R+RRE++S+R+R+LQ+LVPG NK+ A MLDE +Y++ L+ QV+ L
Sbjct: 287 TVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEAASYLKFLKSQVQKL 337
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 21/110 (19%)
Query: 227 EQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERV---------- 276
E N G K+ + +K +L+G+ RA RG AT+ SL R+
Sbjct: 212 ESNGGDTFLSKEDGEDSKALNLNGKT-------RASRGAATDPQSLYARLKQLNKVHCMM 264
Query: 277 ---RREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 323
RRE+I+ER+R+LQ LVP K+ + ML+E + YV+ LQ Q++ LS
Sbjct: 265 VQKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 313
>gi|326518931|dbj|BAJ92626.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 248 LSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
+ GEAP + KR +A H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE
Sbjct: 246 VKGEAPMRSA-ISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDE 303
Query: 308 IINYVQSLQQQVE 320
+I++++ LQ V+
Sbjct: 304 VIDHLKQLQATVQ 316
>gi|326502778|dbj|BAJ99017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 248 LSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
+ GEAP + KR +A H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE
Sbjct: 246 VKGEAPMRSA-ISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDE 303
Query: 308 IINYVQSLQQQVE 320
+I++++ LQ V+
Sbjct: 304 VIDHLKQLQATVQ 316
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
+++ ++A R+RRE++SER+R+LQ LVPG +K+ A MLDE +Y++ L+ Q+E L
Sbjct: 302 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATMLDEAASYLKFLKSQLEAL 357
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
+ ++ S+A R RRE+IS+R+R+LQ LVPG K+ A MLDE I+Y++ L+QQ++ L
Sbjct: 370 SIDTQSVAARHRRERISDRIRVLQRLVPGGTKM-DTASMLDEAIHYIKFLKQQLQTL 425
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
+++ ++A R+RRE++SER+R+LQ LVPG +K+ A MLDE +Y++ L+ Q+E L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATMLDEAASYLKFLKSQLEAL 359
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
+A +G AT+ SL R RRE+I +R+R+LQ LVP K+ + ML+E + YV+ LQ Q
Sbjct: 241 KASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQN 299
Query: 320 EFLS 323
+ LS
Sbjct: 300 KLLS 303
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 270 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
++A R+RRE++SER+R+LQ LVPG +K+ A MLDE +Y++ L+ Q+E L
Sbjct: 236 QTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 287
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I +++ LQ QV+
Sbjct: 257 KRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVIEHLKQLQAQVQ 314
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+R +A H+L+ER RR++I+E+M+ LQEL+P NK + KA MLDE I Y++S
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKS 386
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 261 AKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 314
+R +A H+L+ER RR++I+E+M+ LQEL+P NK + KA MLDE I Y++S
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKS 386
>gi|4218118|emb|CAA22972.1| putative protein [Arabidopsis thaliana]
gi|7269735|emb|CAB81468.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 13/106 (12%)
Query: 198 KNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYI 257
K V VE PS SG+ K + E Q I+ T + ++ ++ T+++ S
Sbjct: 201 KAVAVEAAGTPS---SGVCKAETEPVQ-IQPATESKLKAREETHGTEEARGSTSR----- 251
Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 303
KR + H+LAER RREKI+E+M+ LQ+L+P CNK+ +V
Sbjct: 252 ----KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKVESDSV 293
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
KR +A H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I +++ LQ QV+
Sbjct: 257 KRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVIEHLKQLQAQVQ 314
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
S+A R RRE+ISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 136 SVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 186
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 260 RAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 319
RA +G AT+ SL R RREKI+ER++ LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 226
Query: 320 E 320
+
Sbjct: 227 K 227
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
S+A R RRE+ISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 141 SVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 191
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 271 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 322
++A R+RRE++SER+R+LQ+LVPG +K+ A MLDE +Y++ L+ QV+ L
Sbjct: 297 TVAARLRRERVSERLRVLQKLVPGGSKMD-TASMLDEAASYLKFLKSQVQAL 347
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.128 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,855,872,234
Number of Sequences: 23463169
Number of extensions: 295062223
Number of successful extensions: 738552
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 1973
Number of HSP's that attempted gapping in prelim test: 735570
Number of HSP's gapped (non-prelim): 3755
length of query: 426
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 281
effective length of database: 8,957,035,862
effective search space: 2516927077222
effective search space used: 2516927077222
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)