Query 014375
Match_columns 426
No_of_seqs 156 out of 672
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 10:26:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014375.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014375hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yo5_C SAM pointed domain cont 29.1 70 0.0024 25.3 4.5 43 336-383 36-78 (97)
2 1awc_A Protein (GA binding pro 25.7 46 0.0016 26.9 3.0 66 338-408 26-93 (110)
3 3jtg_A ETS-related transcripti 24.8 82 0.0028 25.1 4.3 42 337-383 31-72 (103)
4 1fli_A FLI-1; transcription/DN 23.7 76 0.0026 25.1 3.8 42 337-383 30-71 (98)
5 1wwx_A E74-like factor 5 ESE-2 21.6 93 0.0032 25.0 4.0 42 337-383 35-76 (107)
6 2lf8_A Transcription factor ET 25.8 21 0.00073 29.7 0.0 67 337-408 30-98 (128)
7 2l27_B Peptide agonist; CRF, E 19.0 28 0.00097 22.5 0.3 22 287-309 1-22 (38)
8 2ypr_A Protein FEV; transcript 17.9 1.2E+02 0.0041 24.1 3.9 42 337-383 32-73 (102)
9 2kru_A Light-independent proto 15.9 43 0.0015 24.4 0.7 15 167-181 15-29 (63)
10 2dao_A Transcription factor ET 15.6 1.7E+02 0.006 23.8 4.4 61 337-402 34-96 (118)
No 1
>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21
Probab=29.10 E-value=70 Score=25.28 Aligned_cols=43 Identities=12% Similarity=0.276 Sum_probs=31.6
Q ss_pred HHCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCc
Q 014375 336 VQNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLP 383 (426)
Q Consensus 336 ~~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r 383 (426)
+++|++.+-+.++||+++-.--..- +=+ |.++.+.+.-||++.
T Consensus 36 ~~~g~Fkl~d~~~VArlWG~rKnkp----~Mn-YeklSRaLRyYY~~~ 78 (97)
T 1yo5_C 36 KEKGIFKIEDSAQVARLWGIRKNRP----AMN-YDKLSRSIRQYYKKG 78 (97)
T ss_dssp TTTTEEEESCHHHHHHHHHHHHTCT----TCC-HHHHHHHHHHTTTTT
T ss_pred CCCCEEEecCHHHHHHHHHhcCCCC----CcC-HHHHHHHHHHHHhcC
Confidence 3567777556789999997553221 223 999999999999875
No 2
>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21
Probab=25.73 E-value=46 Score=26.93 Aligned_cols=66 Identities=15% Similarity=0.104 Sum_probs=45.8
Q ss_pred CCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCch-HHhH-hhhcccccccchHHHHHHHH
Q 014375 338 NDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPW-HKWK-AALKQNYFNTPWASISVIAA 408 (426)
Q Consensus 338 ~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~-~~w~-a~l~~~yf~npW~~is~~aA 408 (426)
.|++.+-+.++||+++-.--..- +=+ |.++...+.-||++.- .+-. ..+...|..+|+..++.-++
T Consensus 26 ~geFkl~d~e~VArlWG~rKnkp----~Mn-YeKlSRaLRyYY~k~ii~Kv~GkrlvY~F~~~~~~l~g~~~~ 93 (110)
T 1awc_A 26 EGEFKLNQPELVAQKWGQRKNKP----TMN-YEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAA 93 (110)
T ss_dssp SSEEECSSHHHHHHHHHHHHTCT----TCC-HHHHHHHHHGGGGSSSEEECTTSTTEEEECSCHHHHTSSCHH
T ss_pred CCEEEecCHHHHHHHHHHccCCC----CCC-HHHHHHHHHHHHhcCCEeeccCCeeEEecCCCHHHHhCCCHH
Confidence 56666557789999998553221 223 9999999999998763 2222 35677888899987766554
No 3
>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} SCOP: a.4.5.21
Probab=24.76 E-value=82 Score=25.13 Aligned_cols=42 Identities=17% Similarity=0.312 Sum_probs=30.6
Q ss_pred HCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCc
Q 014375 337 QNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLP 383 (426)
Q Consensus 337 ~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r 383 (426)
++|+..+-+.++||+++-.--.. ++-+ |.++...+..||++.
T Consensus 31 ~~g~Fkl~dp~~VArlWG~rKnk----p~Mn-YeKlSRaLRyYy~~~ 72 (103)
T 3jtg_A 31 HEGVFKFLRSEAVAQLWGQKKKN----SNMT-YEKLSRAMRYYYKRE 72 (103)
T ss_dssp TTTEEEESSHHHHHHHHHHHTTC----TTCC-HHHHHHHHHHHHHTT
T ss_pred CCceEEecCHHHHHHHHHhccCC----CCcC-HHHHHHHHHHHHhcC
Confidence 45666655678999999875332 1233 999999999999865
No 4
>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=23.73 E-value=76 Score=25.13 Aligned_cols=42 Identities=14% Similarity=0.239 Sum_probs=30.5
Q ss_pred HCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCc
Q 014375 337 QNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLP 383 (426)
Q Consensus 337 ~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r 383 (426)
++|++.+-+.++||+++-.--.. ++=+ |.++.+.+.-||++.
T Consensus 30 ~~g~Fklvd~e~VArlWG~rK~k----p~Mn-YeklSRaLRyYY~k~ 71 (98)
T 1fli_A 30 TNGEFKMTDPDEVARRWGERKSK----PNMN-YDKLSRALRYYYDKN 71 (98)
T ss_dssp SSSSCEECCHHHHHHHHHHHTCC----TTCS-SHHHHHHHHHHHHTT
T ss_pred CCCEEEEcCHHHHHHHHHhccCC----CCcC-HHHHHHHHHHHHHcC
Confidence 35666655679999999855332 1233 999999999999865
No 5
>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=21.57 E-value=93 Score=25.00 Aligned_cols=42 Identities=17% Similarity=0.309 Sum_probs=30.6
Q ss_pred HCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCc
Q 014375 337 QNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLP 383 (426)
Q Consensus 337 ~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r 383 (426)
++|++.+-+.++||+++-.--..- +=+ |.++.+.+.-||++.
T Consensus 35 ~~g~Fkl~d~e~VArlWG~rKnkp----~Mn-YeKlSRaLRyYY~~~ 76 (107)
T 1wwx_A 35 EQGIFRVVKSEALAKMWGQRKKND----RMT-YEKLSRALRYYYKTG 76 (107)
T ss_dssp TTTEEECSCHHHHHHHHHHHHTCT----TCC-HHHHHHHHHHHHHHT
T ss_pred CCCEEEecCHHHHHHHHHhcCCCC----CcC-HHHHHHHHHHHHhcC
Confidence 467777556789999997553321 223 999999999999744
No 6
>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}
Probab=25.77 E-value=21 Score=29.66 Aligned_cols=67 Identities=21% Similarity=0.279 Sum_probs=43.7
Q ss_pred HCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCchH-HhH-hhhcccccccchHHHHHHHH
Q 014375 337 QNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPWH-KWK-AALKQNYFNTPWASISVIAA 408 (426)
Q Consensus 337 ~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~~-~w~-a~l~~~yf~npW~~is~~aA 408 (426)
++|++.+-+.++||+++-.--..- +=+ |.++.+.+.-||++.-- +-. ..+...|..+|..+++--++
T Consensus 30 ~~geFklvdpe~VArlWG~rKnkp----~Mn-YeKLSRALRyYY~k~Ii~Kv~GqrlvY~F~~~p~~l~~~~~~ 98 (128)
T 2lf8_A 30 ESKIFRIVDPNGLARLWGNHKNRT----NMT-YEKMSRALRHYYKLNIIRKEPGQRLLFRFMKTPDEIMSGRTD 98 (128)
Confidence 345666444578999987442211 223 88999999999987642 222 35677888899887765444
No 7
>2l27_B Peptide agonist; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=18.98 E-value=28 Score=22.49 Aligned_cols=22 Identities=18% Similarity=0.190 Sum_probs=16.7
Q ss_pred ceeEeeCchhHHHHhHHHHHHhc
Q 014375 287 PFFKVYDDTERAYRNLLAFERMH 309 (426)
Q Consensus 287 P~l~id~~T~~llrNLiA~Eq~~ 309 (426)
||+.|| -|--+||||+-.....
T Consensus 1 PPiSlD-LTFhlLR~m~emar~e 22 (38)
T 2l27_B 1 PPISLD-LTFNLLREVLEIAKAE 22 (38)
T ss_dssp CCCCSH-HHHHHHHHHHHHHHHG
T ss_pred CCcchh-HHHHHHHHHHHHHHHH
Confidence 677776 5889999999776543
No 8
>2ypr_A Protein FEV; transcription; 2.64A {Homo sapiens} PDB: 1fli_A
Probab=17.93 E-value=1.2e+02 Score=24.14 Aligned_cols=42 Identities=14% Similarity=0.220 Sum_probs=30.9
Q ss_pred HCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCc
Q 014375 337 QNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLP 383 (426)
Q Consensus 337 ~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r 383 (426)
++|++.+-+.++||+++-.--.. ++-+ |.++.+.+..||++.
T Consensus 32 ~~g~Fkl~dp~~VArlWG~rKnk----p~Mn-YeKlSRaLRyYY~k~ 73 (102)
T 2ypr_A 32 GHGEFKLTDPDEVARRWGERKSK----PNMN-YDKLSRALRYYYDKN 73 (102)
T ss_dssp STTEEECSSHHHHHHHHHHHTTC----TTCC-HHHHHHHHTHHHHTT
T ss_pred CCceEEecChHHHHHHHHHhcCC----CCCC-HHHHHHHHHHHHhcC
Confidence 45776666678999998765332 1234 999999999999865
No 9
>2kru_A Light-independent protochlorophyllide reductase subunit B; NESG, PSI, BCHB, bacteriochlorophyll biosynthesis, chlorophyll biosynthesis; NMR {Chlorobaculum tepidum}
Probab=15.93 E-value=43 Score=24.36 Aligned_cols=15 Identities=13% Similarity=0.428 Sum_probs=10.9
Q ss_pred cCchHHHHHHHHHhh
Q 014375 167 NQLPLFILNDLFDLA 181 (426)
Q Consensus 167 NQiPffVL~~L~~~~ 181 (426)
++|||||=.++=+-.
T Consensus 15 kkIP~FVR~kvrr~t 29 (63)
T 2kru_A 15 GKVPFFVRKKVRKNT 29 (63)
T ss_dssp TTSCHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHH
Confidence 569999987665543
No 10
>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=15.64 E-value=1.7e+02 Score=23.82 Aligned_cols=61 Identities=21% Similarity=0.310 Sum_probs=38.6
Q ss_pred HCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCchH-HhH-hhhcccccccchHH
Q 014375 337 QNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPWH-KWK-AALKQNYFNTPWAS 402 (426)
Q Consensus 337 ~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~~-~w~-a~l~~~yf~npW~~ 402 (426)
+.|++.+-+.++||+++-.--..- +=+ |.++.+.+.-||++.-- +-. ..+...|..+|..+
T Consensus 34 ~~g~Fklvdp~~VArlWG~rKnkp----~Mn-YeKLSRaLRyYY~k~ii~Kv~G~r~vY~F~~~p~~~ 96 (118)
T 2dao_A 34 ESKIFRIVDPNGLARLWGNHKNRT----NMT-YEKMSRALRHYYKLNIIRKEPGQRLLFRFMKTPDEI 96 (118)
T ss_dssp GGTEEEESCHHHHHHHHHHHTTCS----SCC-HHHHHHHHHHHHHHTSEECCSSSSSEEEECSCSGGG
T ss_pred CCCeEEEeCHHHHHHHHHhccCCC----CcC-HHHHHHHHHHHHhcCCEEeccCCeEEEEecCCHHHH
Confidence 345666556689999997553221 223 99999999999985531 111 23556666677653
Done!