Query 014375
Match_columns 426
No_of_seqs 156 out of 672
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 10:26:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014375.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014375hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1duxc_ a.4.5.21 (C:) Elk-1 {H 40.3 18 0.0013 26.2 4.6 43 337-384 26-68 (86)
2 d1yo5c1 a.4.5.21 (C:247-334) S 38.6 19 0.0014 26.2 4.5 44 336-384 28-71 (88)
3 d1awca_ a.4.5.21 (A:) GA bindi 37.0 11 0.00082 28.6 3.1 68 338-410 26-95 (110)
4 d1wwxa1 a.4.5.21 (A:8-101) E74 26.4 26 0.0019 25.8 3.4 42 337-383 28-69 (94)
5 d1v54g_ f.23.2.1 (G:) Mitochon 20.7 30 0.0022 24.8 2.8 23 399-421 15-37 (84)
6 d1flia_ a.4.5.21 (A:) Fli-1 {H 19.1 51 0.0037 24.2 3.8 43 337-384 30-72 (98)
7 d1eg3a2 a.39.1.7 (A:210-306) D 18.4 98 0.0072 22.5 5.4 52 71-122 3-76 (97)
8 d1hbxg_ a.4.5.21 (G:) Serum re 17.5 65 0.0047 25.6 4.4 57 339-400 30-88 (155)
9 d1puee_ a.4.5.21 (E:) Transcri 17.4 61 0.0045 23.3 3.9 43 337-383 27-71 (88)
10 d1gvja_ a.4.5.21 (A:) ETS-1 tr 14.4 50 0.0036 25.9 2.9 63 339-406 66-130 (142)
No 1
>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.30 E-value=18 Score=26.24 Aligned_cols=43 Identities=14% Similarity=0.309 Sum_probs=31.6
Q ss_pred HCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCch
Q 014375 337 QNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPW 384 (426)
Q Consensus 337 ~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~ 384 (426)
++|+..+-+.++||+++-.- |+- ++ --|.++.+.+..||++.-
T Consensus 26 ~~g~Fklv~~~~VA~lWG~~-Knk---~~-MnYeklSRaLRyyY~~~i 68 (86)
T d1duxc_ 26 DGGEFKLVDAEEVARLWGLR-KNK---TN-MNYDKLSRALRYYYDKNI 68 (86)
T ss_dssp TTTEEECTTHHHHHHHHHHT-TTC---SC-CCHHHHHHHHHHHHTTTS
T ss_pred CCCEEEecCHHHHHHHHHhc-cCC---CC-CCHHHHHHHHHHHHhccc
Confidence 46777766779999999644 331 12 339999999999998763
No 2
>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.59 E-value=19 Score=26.16 Aligned_cols=44 Identities=11% Similarity=0.256 Sum_probs=31.9
Q ss_pred HHCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCch
Q 014375 336 VQNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPW 384 (426)
Q Consensus 336 ~~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~ 384 (426)
.++|+..+-+.++||+++-.--..- +=+ |.++..++..||++.-
T Consensus 28 ~~~g~Fkl~~~~~VA~lWG~~Knk~----~M~-YeklSRALRyYY~~~i 71 (88)
T d1yo5c1 28 KEKGIFKIEDSAQVARLWGIRKNRP----AMN-YDKLSRSIRQYYKKGI 71 (88)
T ss_dssp TTTTEEEESCHHHHHHHHHHHHTCT----TCC-HHHHHHHHHHTTTTTS
T ss_pred CCCceEEecCHHHHHHHHHHhhcCC----CCC-HHHHHHHHHHHHhccc
Confidence 3567777667789999996554322 223 9999999999998663
No 3
>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.97 E-value=11 Score=28.64 Aligned_cols=68 Identities=15% Similarity=0.129 Sum_probs=47.7
Q ss_pred CCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCchH-HhH-hhhcccccccchHHHHHHHHHH
Q 014375 338 NDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPWH-KWK-AALKQNYFNTPWASISVIAAVI 410 (426)
Q Consensus 338 ~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~~-~w~-a~l~~~yf~npW~~is~~aA~~ 410 (426)
.|+..+-+.++||+++-.- |+- ++-+ |.++...+..||++.-- +-. ..+...|..+||.+++.-++-+
T Consensus 26 ~geFkl~d~e~VA~lWG~~-Knk---~~M~-YeklSRaLRyYY~~~il~Kv~g~rl~Y~F~~d~~~~~~~~~~~l 95 (110)
T d1awca_ 26 EGEFKLNQPELVAQKWGQR-KNK---PTMN-YEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAEL 95 (110)
T ss_dssp SSEEECSSHHHHHHHHHHH-HTC---TTCC-HHHHHHHHHGGGGSSSEEECTTSTTEEEECSCHHHHTSSCHHHH
T ss_pred CCEEEeCCHHHHHHHHHHh-hCC---Cccc-HHHHHHHHHHHHhcccEEecCCcEEEEeccCCHHHHhCCCHHHH
Confidence 4666666779999999644 332 1233 99999999999987642 222 3567888899999876555533
No 4
>d1wwxa1 a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.44 E-value=26 Score=25.76 Aligned_cols=42 Identities=17% Similarity=0.363 Sum_probs=31.5
Q ss_pred HCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCc
Q 014375 337 QNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLP 383 (426)
Q Consensus 337 ~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r 383 (426)
++|+..+-+.++||+++-.--..- . --|.++...+..||++.
T Consensus 28 ~~g~Fkl~d~~~VA~lWG~~K~~~----~-M~YeklSRaLRyYY~~~ 69 (94)
T d1wwxa1 28 EQGIFRVVKSEALAKMWGQRKKND----R-MTYEKLSRALRYYYKTG 69 (94)
T ss_dssp TTTEEECSCHHHHHHHHHHHHTCT----T-CCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEcCHHHHHHHHHhhcCCC----C-CcHHHHHHHHHHHHhcc
Confidence 567777666789999997664432 2 23999999999999754
No 5
>d1v54g_ f.23.2.1 (G:) Mitochondrial cytochrome c oxidase subunit VIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.74 E-value=30 Score=24.81 Aligned_cols=23 Identities=13% Similarity=0.147 Sum_probs=19.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHhh
Q 014375 399 PWASISVIAAVILLLLTATQTVS 421 (426)
Q Consensus 399 pW~~is~~aA~~ll~lt~~QTv~ 421 (426)
-|+-||+++|+-+++++.+.++.
T Consensus 15 lWkkis~~va~P~i~l~~~n~~~ 37 (84)
T d1v54g_ 15 TWRFLTFGLALPSVALCTLNSWL 37 (84)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 48889999999888888888763
No 6
>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.14 E-value=51 Score=24.24 Aligned_cols=43 Identities=14% Similarity=0.285 Sum_probs=30.8
Q ss_pred HCCeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCch
Q 014375 337 QNDVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPW 384 (426)
Q Consensus 337 ~~GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~ 384 (426)
++|+..+-+.++||+++-.--..- .--|.++.+.+..||++.-
T Consensus 30 ~~geFkl~~~~~VA~lWG~~Knk~-----~M~YeklSRaLRyYY~~~i 72 (98)
T d1flia_ 30 TNGEFKMTDPDEVARRWGERKSKP-----NMNYDKLSRALRYYYDKNI 72 (98)
T ss_dssp SSSSCEECCHHHHHHHHHHHTCCT-----TCSSHHHHHHHHHHHHTTS
T ss_pred CCCEEEeCCHHHHHHHHHHhhcCC-----CccHHHHHHHHHHHHhccc
Confidence 346666667799999996543221 2239999999999998763
No 7
>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.44 E-value=98 Score=22.50 Aligned_cols=52 Identities=21% Similarity=0.305 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhh-----HHHHHHHHHHH---------------HHHHHHHhhhhhhh--cCCChhHHHHHH
Q 014375 71 EHKQRYLKYFLQRTK-----VRMARFLSFIK---------------ERETKLRNCYAETI--RNLGSDEFVAMV 122 (426)
Q Consensus 71 ~~K~~~~~~~l~r~~-----~~l~~~~~~i~---------------~~e~~~R~cY~e~~--~~~~~~eF~~Mm 122 (426)
+.|.||+=+.+..++ ..++.++..+. .+|..+|+|+...- .+.+.++|+.-|
T Consensus 3 ~dKyRYlF~qisd~~g~~~~~kl~~lL~d~lqlP~~vgE~~sFG~s~ie~sv~sCF~~~~~~~~i~~~~FL~wl 76 (97)
T d1eg3a2 3 EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWM 76 (97)
T ss_dssp HHHHHHHHHHHSCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHhCcccccCCCcchHHHHHHHhccCCCCcccHHHHHHHH
Confidence 358888888887543 24555444432 24778888885432 146667765443
No 8
>d1hbxg_ a.4.5.21 (G:) Serum response factor accessory protein 1a, SAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.47 E-value=65 Score=25.62 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=38.1
Q ss_pred CeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCchH-HhH-hhhcccccccch
Q 014375 339 DVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPWH-KWK-AALKQNYFNTPW 400 (426)
Q Consensus 339 GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~~-~w~-a~l~~~yf~npW 400 (426)
|+..+-+-++||+++-.--..-. --|.++.+.|..||++.-- +-. ..|..+|...|-
T Consensus 30 geFkl~~~~~VA~lWG~rKnk~~-----M~YeklSRaLRyYY~k~il~Kv~g~r~~YkF~~~p~ 88 (155)
T d1hbxg_ 30 GQFKLLQAEEVARLWGIRKNKPN-----MNYDKLSRALRYYYVKNIIKKVNGQKFVYKFVSYPE 88 (155)
T ss_dssp SCEEETTHHHHHHHHHHGGGCTT-----CCHHHHHHHHHHHHHTTSEEECSSCTTEEEESSTTG
T ss_pred CEEEeCCHHHHHHHHHhhcCCCC-----ccHHHHHHHHHHHHhcCCEeeccCceeEEEecCCHH
Confidence 44446677899999986543322 2399999999999987632 221 345666666664
No 9
>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.36 E-value=61 Score=23.26 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=30.4
Q ss_pred HCCeee-e-CCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCc
Q 014375 337 QNDVIR-L-GNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLP 383 (426)
Q Consensus 337 ~~GIi~-l-gsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r 383 (426)
.+||.. . .+.++||+++-.--++- . +=+ |.++...|.-||++.
T Consensus 27 ~~g~F~fv~~~~e~VA~lWG~~K~Nr-~--~Mn-YeklSRaLRyYY~~~ 71 (88)
T d1puee_ 27 DKGTFQFSSKHKEALAHRWGIQKGNR-K--KMT-YEKMARALRNYGKTG 71 (88)
T ss_dssp TTTEEEECTTTHHHHHHHHHHHHTCS-S--CCC-HHHHHHHHHHHHHHS
T ss_pred CCceEEEEeCCHHHHHHHHHhhcCCC-C--CCc-HHHHHHHHHHHHhcc
Confidence 478888 3 34578999998654331 1 223 999999999999855
No 10
>d1gvja_ a.4.5.21 (A:) ETS-1 transcription factor, residues 331-440 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.40 E-value=50 Score=25.94 Aligned_cols=63 Identities=11% Similarity=0.109 Sum_probs=43.0
Q ss_pred CeeeeCCchHHHHHHHHhccCCccCCCCcchHHHHHHHHhhhcCchH-Hh-HhhhcccccccchHHHHHH
Q 014375 339 DVIRLGNDGNIATVFGNLVRGSALDSDDFQYSGVVTDLQAYRKLPWH-KW-KAALKQNYFNTPWASISVI 406 (426)
Q Consensus 339 GIi~lgsdeeva~lFn~L~~~~~~~~~~~~~~~v~~~ln~~~~~r~~-~w-~a~l~~~yf~npW~~is~~ 406 (426)
|...+-+-++||+++-.--..- + --|.++...+..||++.-- +- -..|..+|...||..++.-
T Consensus 66 ~eFkl~d~e~VA~lWG~~Knk~----~-MnYeKmSRALRyYY~k~il~Kv~g~rl~YkF~~~~~~l~~~~ 130 (142)
T d1gvja_ 66 WEFKLSDPDEVARRWGKRKNKP----K-MNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYT 130 (142)
T ss_dssp TEEECSSHHHHHHHHHHHHTCT----T-CCHHHHHHHHHHHHHTTSEEECTTSSSEEEECSCHHHHHSCC
T ss_pred CeEEeCCHHHHHHHHHhhcCCC----C-ccHHHHhHHHHHHhhcceEEecCCcEEEEecCCCHHHHhccC
Confidence 5555667789999996554322 2 3399999999999987632 21 1356777888888765544
Done!