Your job contains 1 sequence.
>014376
MSTPMEITVHNSTEAEISDQDGIPEQKGVAGPPLPLLAEDKFLVSVEVCLKLSSTARIDD
VRLAVERMLEKRSLSYVDGPIPIPIDDPFLVENVQRICVSDTDEWVKNHDILLFWQVKPV
VQVFQLSEEGPCEELSGDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALM
FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF
SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN
ALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQEL
IRTGIISNFQDCDQSMLPNFSILKEKLSNPDIQEADRSQHFYKQLLEAAEACEVRNKMFH
LILAFV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014376
(426 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q15645 - symbol:TRIP13 "Pachytene checkpoint pr... 885 1.2e-88 1
UNIPROTKB|E1C6Q1 - symbol:TRIP13 "Pachytene checkpoint pr... 873 2.3e-87 1
UNIPROTKB|Q6P4W8 - symbol:trip13 "Pachytene checkpoint pr... 871 3.7e-87 1
UNIPROTKB|F1N3B9 - symbol:TRIP13 "Uncharacterized protein... 869 6.0e-87 1
RGD|1308516 - symbol:Trip13 "thyroid hormone receptor int... 868 7.7e-87 1
UNIPROTKB|E2R222 - symbol:TRIP13 "Pachytene checkpoint pr... 865 1.6e-86 1
UNIPROTKB|D3K5L7 - symbol:TRIP13 "Pachytene checkpoint pr... 863 2.6e-86 1
MGI|MGI:1916966 - symbol:Trip13 "thyroid hormone receptor... 862 3.3e-86 1
ZFIN|ZDB-GENE-040426-1488 - symbol:trip13 "thyroid hormon... 851 4.9e-85 1
FB|FBgn0051453 - symbol:pch2 species:7227 "Drosophila mel... 702 3.0e-69 1
DICTYBASE|DDB_G0279111 - symbol:DDB_G0279111 "AAA ATPase ... 674 2.8e-66 1
WB|WBGene00008641 - symbol:pch-2 species:6239 "Caenorhabd... 658 1.4e-64 1
UNIPROTKB|H0YAL2 - symbol:TRIP13 "Pachytene checkpoint pr... 571 2.3e-55 1
SGD|S000000390 - symbol:PCH2 "Nucleolar component of the ... 404 1.1e-37 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 237 7.8e-17 1
UNIPROTKB|E1BZ64 - symbol:KATNAL2 "Uncharacterized protei... 213 1.3e-14 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 216 1.8e-14 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 210 8.6e-14 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 210 8.8e-14 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 199 1.3e-13 2
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 208 1.4e-13 1
UNIPROTKB|E1BAN2 - symbol:KATNAL2 "Uncharacterized protei... 204 1.9e-13 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 205 3.1e-13 1
UNIPROTKB|K7EIJ8 - symbol:KATNAL2 "Katanin p60 ATPase-con... 197 3.2e-13 1
UNIPROTKB|Q8IYT4 - symbol:KATNAL2 "Katanin p60 ATPase-con... 200 5.4e-13 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 198 1.9e-12 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 198 1.9e-12 1
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4... 196 1.9e-12 1
UNIPROTKB|J9P5W4 - symbol:KATNAL2 "Uncharacterized protei... 190 3.1e-12 1
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 190 3.8e-12 1
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 195 3.8e-12 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 189 4.3e-12 1
UNIPROTKB|J9NYM5 - symbol:KATNAL2 "Uncharacterized protei... 190 4.4e-12 1
ZFIN|ZDB-GENE-051113-156 - symbol:katnal2 "katanin p60 su... 191 4.5e-12 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 194 5.0e-12 1
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 193 6.0e-12 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 193 6.5e-12 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 193 6.5e-12 1
UNIPROTKB|E2RK60 - symbol:KATNAL2 "Uncharacterized protei... 190 7.1e-12 1
MGI|MGI:1924234 - symbol:Katnal2 "katanin p60 subunit A-l... 190 7.2e-12 1
UNIPROTKB|K7EM02 - symbol:KATNAL2 "Katanin p60 ATPase-con... 167 8.4e-12 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 192 8.4e-12 1
UNIPROTKB|J9PBP3 - symbol:KATNAL2 "Uncharacterized protei... 190 8.7e-12 1
RGD|1564708 - symbol:Katnal2 "katanin p60 subunit A-like ... 189 8.7e-12 1
GENEDB_PFALCIPARUM|PFD0390c - symbol:PFD0390c "AAA family... 189 9.5e-12 2
UNIPROTKB|Q9U0K7 - symbol:PFD0390c "AAA family ATPase, pu... 189 9.5e-12 2
POMBASE|SPAC1834.11c - symbol:sec18 "secretory pathway pr... 191 1.1e-11 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 185 1.4e-11 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 183 2.3e-11 1
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 189 2.5e-11 1
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 182 2.9e-11 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 182 3.1e-11 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 182 3.1e-11 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 182 3.1e-11 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 182 3.1e-11 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 182 3.1e-11 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 182 3.1e-11 1
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 182 3.1e-11 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 182 3.2e-11 1
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 182 3.2e-11 1
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 182 3.2e-11 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 182 3.3e-11 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 182 3.3e-11 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 184 3.3e-11 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 186 3.9e-11 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 184 6.4e-11 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 184 6.4e-11 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 184 6.4e-11 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 184 6.4e-11 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 184 6.4e-11 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 184 6.4e-11 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 184 6.4e-11 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 184 6.5e-11 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 184 6.5e-11 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 184 6.6e-11 1
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 189 6.8e-11 2
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 183 8.3e-11 1
FB|FBgn0029656 - symbol:CG10793 species:7227 "Drosophila ... 179 9.7e-11 1
SGD|S000002802 - symbol:RPT3 "ATPase of the 19S regulator... 178 9.8e-11 1
TAIR|locus:2038678 - symbol:SKD1 "SUPPRESSOR OF K+ TRANSP... 178 1.0e-10 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 182 1.1e-10 1
TAIR|locus:2062274 - symbol:CCP1 "conserved in ciliated s... 176 1.3e-10 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 181 1.4e-10 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 181 1.4e-10 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 181 1.4e-10 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 178 3.0e-10 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 178 3.0e-10 1
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 173 3.7e-10 1
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 173 3.7e-10 1
MGI|MGI:1100499 - symbol:Vps4b "vacuolar protein sorting ... 173 3.9e-10 1
RGD|1305969 - symbol:Vps4b "vacuolar protein sorting 4 ho... 173 3.9e-10 1
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 172 4.5e-10 1
WB|WBGene00021334 - symbol:vps-4 species:6239 "Caenorhabd... 172 4.7e-10 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 176 4.9e-10 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 171 5.2e-10 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 172 5.4e-10 1
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 171 5.6e-10 1
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 170 7.9e-10 1
UNIPROTKB|Q9UN37 - symbol:VPS4A "Vacuolar protein sorting... 169 1.0e-09 1
UNIPROTKB|P63345 - symbol:mpa "Proteasome-associated ATPa... 171 1.2e-09 1
WARNING: Descriptions of 456 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q15645 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0001673 "male
germ cell nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007144 "female meiosis I" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0007131 "reciprocal meiotic recombination" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0048477
"oogenesis" evidence=ISS] [GO:0007130 "synaptonemal complex
assembly" evidence=ISS] [GO:0003712 "transcription cofactor
activity" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0007286
GO:GO:0048477 GO:GO:0007283 GO:GO:0006366 GO:GO:0001673
GO:GO:0006302 GO:GO:0003712 eggNOG:COG0464 GO:GO:0017111
GO:GO:0001556 EMBL:CH471102 GO:GO:0007131 GO:GO:0007130
GO:GO:0007141 EMBL:AC122719 GO:GO:0000239 GO:GO:0007144
HOGENOM:HOG000234557 CTD:9319 OMA:TEKIDMA HOVERGEN:HBG052830
OrthoDB:EOG4STS4K EMBL:U96131 EMBL:CR456744 EMBL:BC000404
EMBL:BC019294 EMBL:L40384 IPI:IPI00003505 IPI:IPI00847729
RefSeq:NP_004228.1 UniGene:Hs.731712 ProteinModelPortal:Q15645
SMR:Q15645 IntAct:Q15645 MINT:MINT-1146352 STRING:Q15645
PhosphoSite:Q15645 DMDM:85541056 PaxDb:Q15645 PeptideAtlas:Q15645
PRIDE:Q15645 DNASU:9319 Ensembl:ENST00000166345 GeneID:9319
KEGG:hsa:9319 UCSC:uc003jbr.3 GeneCards:GC05P000892 HGNC:HGNC:12307
HPA:HPA005727 MIM:604507 neXtProt:NX_Q15645 PharmGKB:PA36986
InParanoid:Q15645 PhylomeDB:Q15645 GenomeRNAi:9319 NextBio:34909
Bgee:Q15645 CleanEx:HS_TRIP13 Genevestigator:Q15645
GermOnline:ENSG00000071539 Uniprot:Q15645
Length = 432
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 177/335 (52%), Positives = 243/335 (72%)
Query: 34 LPLLAEDKFLVSVEVCLKLSSTARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVEN 93
LP +AE V VEV + SSTA+ +D+ L+V ++L + ++ + FL N
Sbjct: 12 LPCVAESP-TVHVEVHQRGSSTAKKEDINLSVRKLLNRHNIVF-GDYTWTEFDEPFLTRN 69
Query: 94 VQRICVSDTDEWVKNHDILLFWQVKPVVQVFQLSEEGPCEE-LSGDGQ-LSSFNEWILPA 151
VQ + + DT+ VK+ + + +FQL+E+GP E L + + + + N W+LPA
Sbjct: 70 VQSVSIIDTELKVKDSQPIDLSACTVALHIFQLNEDGPSSENLEEETENIIAANHWVLPA 129
Query: 152 KEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLC 211
EF G+W+SL+Y+ +K LL Y + L+F++K VN L++WNR+VLLHGPPGTGKTSLC
Sbjct: 130 AEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVNSNLITWNRVVLLHGPPGTGKTSLC 189
Query: 212 KALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFV 271
KALAQKL+IR SSRY QL+E+N+HSLFSKWFSESGKLV K+FQKIQ+++++++ LVFV
Sbjct: 190 KALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKDALVFV 249
Query: 272 LIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF 331
LIDEVESL AAR A +G+EPSD+IRVVNA+LTQ+D++K NV+ILTTSNIT ID+AF
Sbjct: 250 LIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAF 309
Query: 332 VDRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
VDRADIK Y+GPP+ A ++I SCL+EL++ II
Sbjct: 310 VDRADIKQYIGPPSAAAIFKIYLSCLEELMKCQII 344
>UNIPROTKB|E1C6Q1 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000239 "pachytene" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0048477 "oogenesis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISS] [GO:0007130 "synaptonemal complex
assembly" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0001673 GO:GO:0006302
GO:GO:0017111 GO:GO:0007131 GO:GO:0007130 GO:GO:0007141
GO:GO:0000239 GO:GO:0007144 GeneTree:ENSGT00390000017432 CTD:9319
OMA:TEKIDMA EMBL:AADN02027348 IPI:IPI00594401 RefSeq:XP_418892.2
Ensembl:ENSGALT00000020433 GeneID:420798 KEGG:gga:420798
NextBio:20823662 Uniprot:E1C6Q1
Length = 432
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 173/329 (52%), Positives = 238/329 (72%)
Query: 40 DKFLVSVEVCLKLSSTARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVENVQRICV 99
D + VEV K +STA+ +D+R++V ++L + ++ + FL NVQ + +
Sbjct: 17 DNVQIHVEVHQKSNSTAKKEDIRMSVLKLLNRHNIVF-GDYKWTEFDDGFLNSNVQSVSI 75
Query: 100 SDTDEWVKNHDILLFWQVKPVVQVFQLSEEGPC-EELSGDGQ-LSSFNEWILPAKEFDGM 157
DT+ +K + + + +F L+EEGP E L + + + + N W+LPA EF G+
Sbjct: 76 VDTELKLKERQPIDLSKSSLTIHIFHLNEEGPSIENLEEENEDIVAANHWVLPAAEFHGL 135
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WESLIY++ +K LL Y + L+F+++ V+ L+SWNR+VLLHGPPGTGKTSLCKALAQK
Sbjct: 136 WESLIYDTEVKSHLLDYVTTTLLFSDRNVDSNLISWNRVVLLHGPPGTGKTSLCKALAQK 195
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
L+IR S RY QL+E+N+HSLFSKWFSESGKLV K+FQKIQE++++++ LVFVLIDEVE
Sbjct: 196 LTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELIDDKDALVFVLIDEVE 255
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADI 337
SL AAR A +G+EPSD+IRVVNA+L Q+D++K PNV+ILTTSNIT ID+AFVDRADI
Sbjct: 256 SLTAARSAFKAGTEPSDAIRVVNAVLMQIDQIKRYPNVVILTTSNITEKIDMAFVDRADI 315
Query: 338 KAYVGPPTLQARYEILRSCLQELIRTGII 366
K Y+GPP+ A + I SCL+EL++ II
Sbjct: 316 KQYIGPPSAAAIFRIYLSCLEELMKCQII 344
>UNIPROTKB|Q6P4W8 [details] [associations]
symbol:trip13 "Pachytene checkpoint protein 2 homolog"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0007130
"synaptonemal complex assembly" evidence=ISS] [GO:0007131
"reciprocal meiotic recombination" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0048477 "oogenesis"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0007131 GO:GO:0007130
GeneTree:ENSGT00390000017432 HOGENOM:HOG000234557 CTD:9319
HOVERGEN:HBG052830 OrthoDB:EOG4STS4K EMBL:BC063217
RefSeq:NP_989228.1 UniGene:Str.839 ProteinModelPortal:Q6P4W8
STRING:Q6P4W8 Ensembl:ENSXETT00000028696 GeneID:394836
KEGG:xtr:394836 Xenbase:XB-GENE-974898 InParanoid:Q6P4W8
OMA:CKGLAQK Bgee:Q6P4W8 Uniprot:Q6P4W8
Length = 432
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 171/325 (52%), Positives = 239/325 (73%)
Query: 44 VSVEVCLKLSSTARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVENVQRICVSDTD 103
V V+V K +S A D++ V ++L + + + FL++N+ I ++DT+
Sbjct: 21 VHVDVHQKSNSPATSQDIQSHVMQLLNRHCVVF-GDYSWTEFDDSFLMKNIHSISIADTE 79
Query: 104 EWVKNHDILLFWQVKPVVQVFQLSEEGPC-EELSGDGQ-LSSFNEWILPAKEFDGMWESL 161
+K+ + + K ++ +FQL+E+GPC E L + + L + N W+LPA +F G+W+SL
Sbjct: 80 LKLKDRQPIDLSKCKVLIHIFQLNEDGPCVESLEEENEDLVAANHWLLPAADFHGLWDSL 139
Query: 162 IYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIR 221
IY+S +K RLL Y +A++F++K V+ L+SWNR+VLLHGPPGTGKTSLCKALAQKL+IR
Sbjct: 140 IYDSEIKSRLLDYIETAMLFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKALAQKLTIR 199
Query: 222 FSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAA 281
S RY QLVE+N+HSLFSKWFSESGKLV K+FQKI E++ ++ LVFVLIDEVESL A
Sbjct: 200 LSYRYRYGQLVEINSHSLFSKWFSESGKLVTKMFQKIHELINDKEALVFVLIDEVESLTA 259
Query: 282 ARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYV 341
ARKA+ +G+EPSD+IRVVNA+LTQ+D +K PNV+IL+TSN+T ID+AF DRADIK Y+
Sbjct: 260 ARKASRAGTEPSDAIRVVNAVLTQIDHIKRYPNVVILSTSNLTEKIDVAFTDRADIKQYI 319
Query: 342 GPPTLQARYEILRSCLQELIRTGII 366
GPP+ A ++I SC++EL++ II
Sbjct: 320 GPPSPAAIFKIYLSCIEELMKCQII 344
>UNIPROTKB|F1N3B9 [details] [associations]
symbol:TRIP13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0007286 GO:GO:0001673
GO:GO:0006302 GO:GO:0017111 GO:GO:0001556 GO:GO:0007131
GO:GO:0007130 GO:GO:0007141 GO:GO:0000239 GO:GO:0007144
GeneTree:ENSGT00390000017432 CTD:9319 OMA:TEKIDMA EMBL:DAAA02051455
IPI:IPI00842519 RefSeq:XP_002696498.1 RefSeq:XP_002705648.1
UniGene:Bt.26855 Ensembl:ENSBTAT00000048744 GeneID:506746
KEGG:bta:506746 NextBio:20867736 Uniprot:F1N3B9
Length = 432
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 173/335 (51%), Positives = 242/335 (72%)
Query: 34 LPLLAEDKFLVSVEVCLKLSSTARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVEN 93
LP +AE V VEV + STA+ +D++L+V ++L + ++ + FL N
Sbjct: 12 LPCVAEAP-TVHVEVHQRSGSTAKKEDIKLSVRKLLNRHNIVF-GDYTWSEFDEPFLTRN 69
Query: 94 VQRICVSDTDEWVKNHDILLFWQVKPVVQVFQLSEEGPCEE-LSGDGQ-LSSFNEWILPA 151
VQ + + DT+ K+ + + +FQL+E+GP E L + + + + N W+LPA
Sbjct: 70 VQSVSIVDTELKAKDPQPIDLSACNIALHIFQLNEDGPSSENLEEETENIIAANHWVLPA 129
Query: 152 KEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLC 211
EF G+W+SL+Y+ +K LL Y + L+F++K V+ L++WNR+VLLHGPPGTGKTSLC
Sbjct: 130 AEFHGLWDSLVYDMEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLC 189
Query: 212 KALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFV 271
KALAQKL+IR SSRY QLVE+N+HSLFSKWFSESGKLV ++FQKIQ+++++++ LVFV
Sbjct: 190 KALAQKLTIRLSSRYRYGQLVEINSHSLFSKWFSESGKLVTRMFQKIQDLIDDKDALVFV 249
Query: 272 LIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF 331
LIDEVESL A+R A +G+EPSD+IRVVNA+LTQ+D++K NV+ILTTSNIT ID+AF
Sbjct: 250 LIDEVESLTASRNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITERIDVAF 309
Query: 332 VDRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
VDRADI+ Y+GPP+ A ++I SCL+EL+R II
Sbjct: 310 VDRADIRQYIGPPSAAAIFKIYLSCLEELMRCQII 344
>RGD|1308516 [details] [associations]
symbol:Trip13 "thyroid hormone receptor interactor 13"
species:10116 "Rattus norvegicus" [GO:0000239 "pachytene"
evidence=IEA;ISO] [GO:0001556 "oocyte maturation" evidence=IEA;ISO]
[GO:0001673 "male germ cell nucleus" evidence=IEA;ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=ISO;ISS] [GO:0007130 "synaptonemal complex
assembly" evidence=ISO;ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISO;ISS] [GO:0007141 "male meiosis I"
evidence=IEA;ISO] [GO:0007144 "female meiosis I" evidence=IEA;ISO]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0007286
"spermatid development" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA;ISO] [GO:0048477
"oogenesis" evidence=ISO;ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 RGD:1308516 GO:GO:0005524
GO:GO:0007286 GO:GO:0048477 GO:GO:0007283 GO:GO:0001673
GO:GO:0006302 eggNOG:COG0464 GO:GO:0017111 GO:GO:0001556
GO:GO:0007131 GO:GO:0007130 GO:GO:0007141 GO:GO:0000239
GO:GO:0007144 GeneTree:ENSGT00390000017432 CTD:9319 OMA:TEKIDMA
HOVERGEN:HBG052830 OrthoDB:EOG4STS4K EMBL:BC083900 IPI:IPI00358856
RefSeq:NP_001011930.1 UniGene:Rn.11751 ProteinModelPortal:Q5XHZ9
STRING:Q5XHZ9 Ensembl:ENSRNOT00000021532 GeneID:292206
KEGG:rno:292206 UCSC:RGD:1308516 InParanoid:Q5XHZ9 NextBio:633927
Genevestigator:Q5XHZ9 GermOnline:ENSRNOG00000015810 Uniprot:Q5XHZ9
Length = 432
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 174/335 (51%), Positives = 241/335 (71%)
Query: 34 LPLLAEDKFLVSVEVCLKLSSTARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVEN 93
LP +AE V VEV + STA+ +D++ +V R+L++ ++ + FL N
Sbjct: 12 LPCVAESP-AVHVEVLQRSGSTAKKEDIKQSVYRLLKRHNIVF-GDYVWTEFDEPFLTRN 69
Query: 94 VQRICVSDTDEWVKNHDILLFWQVKPVVQVFQLSEEGPCEE-LSGDGQ-LSSFNEWILPA 151
VQ + + DT+ K+ + + +FQL+EEGP E L + + + + + W+LPA
Sbjct: 70 VQSVSIVDTELKAKDPQPIDLSACTIALHIFQLNEEGPSSENLDEETENIIAASHWVLPA 129
Query: 152 KEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLC 211
EF G+W+SL+Y+ +K LL Y + L+F++K V+ L++WNR+VLLHGPPGTGKTSLC
Sbjct: 130 AEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLC 189
Query: 212 KALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFV 271
KALAQKL+IR SSRY QL+E+N+HSLFSKWFSESGKLV K+FQKIQ++++++ LVFV
Sbjct: 190 KALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKEALVFV 249
Query: 272 LIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF 331
LIDEVESL AAR A +G+EPSD+IRVVNA+LTQ+D++K NV+ILTTSNIT ID+AF
Sbjct: 250 LIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAF 309
Query: 332 VDRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
VDRADIK Y+GPP+ A ++I SCL+EL++ II
Sbjct: 310 VDRADIKQYIGPPSAAAIFKIYLSCLEELMKCQII 344
>UNIPROTKB|E2R222 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9615 "Canis lupus familiaris" [GO:0007283 "spermatogenesis"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISS] [GO:0007131 "reciprocal meiotic recombination"
evidence=ISS] [GO:0048477 "oogenesis" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0007144 "female meiosis I"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0001556
"oocyte maturation" evidence=IEA] [GO:0000239 "pachytene"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0007286 GO:GO:0048477
GO:GO:0007283 GO:GO:0001673 GO:GO:0006302 GO:GO:0017111
GO:GO:0001556 GO:GO:0007131 GO:GO:0007130 GO:GO:0007141
GO:GO:0000239 GO:GO:0007144 GeneTree:ENSGT00390000017432
RefSeq:XP_851775.1 ProteinModelPortal:E2R222
Ensembl:ENSCAFT00000017241 GeneID:609426 KEGG:cfa:609426 CTD:9319
OMA:TEKIDMA NextBio:20895024 Uniprot:E2R222
Length = 432
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 174/335 (51%), Positives = 243/335 (72%)
Query: 34 LPLLAEDKFLVSVEVCLKLSSTARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVEN 93
LP +AE V VEV + STA+ +D++L+V ++L + ++ + FL N
Sbjct: 12 LPCVAEAP-TVHVEVHQRSCSTAKKEDIKLSVRKLLNRHNIVF-GDYKWNEFDDPFLARN 69
Query: 94 VQRICVSDTDEWVKNHDILLFWQVKPVVQVFQLSEEGPCEE-LSGDGQ-LSSFNEWILPA 151
VQ + + DT+ VK+ + + VFQL+E GP E L + + +++ + W+LPA
Sbjct: 70 VQSVSIVDTELKVKDPQPIDLGACTIALHVFQLNEGGPSSETLEEETENITAASHWVLPA 129
Query: 152 KEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLC 211
EF G+W+SL+Y+ +K LL Y + L+F++K V+ L++WNR+VLLHGPPGTGKTSLC
Sbjct: 130 AEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLIAWNRVVLLHGPPGTGKTSLC 189
Query: 212 KALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFV 271
KALAQKL+IR SSRY QL+E+N+HSLFSKWFSESGKLV K+FQKIQ+++++++ LVFV
Sbjct: 190 KALAQKLTIRLSSRYQYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKDALVFV 249
Query: 272 LIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF 331
LIDEVESL AAR A +G+EPSD+IRVVNA+LTQ+D++K NV+ILTTSNIT ID+AF
Sbjct: 250 LIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHCNVVILTTSNITERIDVAF 309
Query: 332 VDRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
VDRADI+ Y+GPP+ A ++I SCL+EL++ II
Sbjct: 310 VDRADIRQYIGPPSAAAIFKIYLSCLEELMKCQII 344
>UNIPROTKB|D3K5L7 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9823 "Sus scrofa" [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISS] [GO:0007131 "reciprocal meiotic recombination"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0048477 "oogenesis" evidence=ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0006302 GO:GO:0017111
GO:GO:0007131 GO:GO:0007130 CTD:9319 EMBL:GU373695
RefSeq:NP_001182300.1 UniGene:Ssc.848 GeneID:100337674
KEGG:ssc:100337674 Uniprot:D3K5L7
Length = 431
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 175/335 (52%), Positives = 241/335 (71%)
Query: 34 LPLLAEDKFLVSVEVCLKLSSTARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVEN 93
LP +AE V VEV + STA+ +DV+L V ++L + ++ + FL N
Sbjct: 12 LPCVAEAP-TVHVEVHQRSGSTAKKEDVKLNVRKLLNRHNIVF-GDYTWTEFDEPFLTRN 69
Query: 94 VQRICVSDTDEWVKNHDILLFWQVKPVVQVFQLSEEGPCEE-LSGDGQ-LSSFNEWILPA 151
VQ + + DT+ VK+ + + VFQL+E GP E L + + + + N W+LPA
Sbjct: 70 VQSVSIVDTELKVKDPQPIDLSTCTVALHVFQLNEGGPSSENLEEETENIIAANHWLLPA 129
Query: 152 KEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLC 211
EF G+W+SL+Y++ +K LL Y + L+F++K V+ L++WNR+VLLHGPPGTGKTSLC
Sbjct: 130 AEFHGLWDSLVYDAEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLC 189
Query: 212 KALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFV 271
KALAQKL+IR SSRY QL+E+N+HSLFSKWFSESGKLV ++FQ IQ+++++++ LVFV
Sbjct: 190 KALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTRMFQMIQDLIDDKDALVFV 249
Query: 272 LIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF 331
LIDEVESL AAR A +G+EPSD+IRVVNA+LTQ+D++K NV+ILTTSNIT ID+AF
Sbjct: 250 LIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITERIDVAF 309
Query: 332 VDRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
VDRADI+ YVGPP+ A ++I SCL+EL++ II
Sbjct: 310 VDRADIRQYVGPPSAAAIFKIYLSCLEELMKCQII 344
>MGI|MGI:1916966 [details] [associations]
symbol:Trip13 "thyroid hormone receptor interactor 13"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0001673 "male germ cell nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0007126 "meiosis" evidence=IEA] [GO:0007130
"synaptonemal complex assembly" evidence=IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0007141 "male
meiosis I" evidence=IMP] [GO:0007144 "female meiosis I"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007286 "spermatid development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0048477 "oogenesis" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1916966 GO:GO:0005524 GO:GO:0007286
GO:GO:0001673 GO:GO:0006302 eggNOG:COG0464 GO:GO:0017111
GO:GO:0001556 GO:GO:0007131 GO:GO:0007130 GO:GO:0007141
GO:GO:0000239 EMBL:CT010471 GO:GO:0007144 EMBL:CH466563
GeneTree:ENSGT00390000017432 HOGENOM:HOG000234557 CTD:9319
OMA:TEKIDMA HOVERGEN:HBG052830 OrthoDB:EOG4STS4K EMBL:AK010336
EMBL:AK142463 EMBL:AK146877 EMBL:AK151568 EMBL:BC023834
EMBL:BC126946 IPI:IPI00318000 IPI:IPI01019210 RefSeq:NP_081458.1
UniGene:Mm.275095 ProteinModelPortal:Q3UA06 SMR:Q3UA06
IntAct:Q3UA06 MINT:MINT-218773 STRING:Q3UA06 PhosphoSite:Q3UA06
PaxDb:Q3UA06 PRIDE:Q3UA06 Ensembl:ENSMUST00000022053 GeneID:69716
KEGG:mmu:69716 InParanoid:Q05CL4 NextBio:330162 Bgee:Q3UA06
CleanEx:MM_TRIP13 Genevestigator:Q3UA06
GermOnline:ENSMUSG00000021569 Uniprot:Q3UA06
Length = 432
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 173/335 (51%), Positives = 240/335 (71%)
Query: 34 LPLLAEDKFLVSVEVCLKLSSTARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVEN 93
LP +AE V VEV + STA+ +D++ +V R+L + ++ + FL N
Sbjct: 12 LPCVAESP-AVHVEVLQRSGSTAKKEDIKSSVYRLLNRHNIVF-GDYVWTEFDDPFLSRN 69
Query: 94 VQRICVSDTDEWVKNHDILLFWQVKPVVQVFQLSEEGPCEE-LSGDGQ-LSSFNEWILPA 151
VQ + + DT+ K+ + + +FQL+EEGP E L + + + + + W+LPA
Sbjct: 70 VQSVSIVDTELKAKDPQPIDLSACTIALHIFQLNEEGPSSENLDEETENIIAASHWVLPA 129
Query: 152 KEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLC 211
EF G+W+SL+Y+ +K LL Y + ++F++K V+ L++WNR+VLLHGPPGTGKTSLC
Sbjct: 130 AEFHGLWDSLVYDVEVKSHLLDYVMTTVLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLC 189
Query: 212 KALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFV 271
KALAQKL+IR SSRY QL+E+N+HSLFSKWFSESGKLV K+FQKIQ++++++ LVFV
Sbjct: 190 KALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKEALVFV 249
Query: 272 LIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF 331
LIDEVESL AAR A +G+EPSD+IRVVNA+LTQ+D++K NV+ILTTSNIT ID+AF
Sbjct: 250 LIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAF 309
Query: 332 VDRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
VDRADIK Y+GPP+ A ++I SCL+EL++ II
Sbjct: 310 VDRADIKQYIGPPSAAAIFKIYLSCLEELMKCQII 344
>ZFIN|ZDB-GENE-040426-1488 [details] [associations]
symbol:trip13 "thyroid hormone receptor interactor
13" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007131 "reciprocal meiotic recombination" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=IEA;ISS] [GO:0048477
"oogenesis" evidence=IEA;ISS] [GO:0006302 "double-strand break
repair" evidence=ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1488 GO:GO:0005524 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0007131 GO:GO:0007130 HOGENOM:HOG000234557
CTD:9319 EMBL:BC056713 IPI:IPI00482940 RefSeq:NP_956876.1
UniGene:Dr.79579 ProteinModelPortal:Q6PH52 STRING:Q6PH52
GeneID:393554 KEGG:dre:393554 HOVERGEN:HBG052830 OrthoDB:EOG4STS4K
NextBio:20814575 ArrayExpress:Q6PH52 Uniprot:Q6PH52
Length = 424
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 171/324 (52%), Positives = 234/324 (72%)
Query: 44 VSVEVCLKLSSTARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVENVQRICVSDTD 103
V +EV +K STA+ DVR V +L++ S + + FL +NV+ + ++D
Sbjct: 18 VHIEVHVKSQSTAKRSDVRTHVLSLLDRHS-TVLRSFKWMDFDNEFLTKNVESVTIADVT 76
Query: 104 EWVKNHDILLFWQVKPVVQVFQLSEEGPCE-ELSGDGQLSSFNEWILPAKEFDGMWESLI 162
K D+ + + +F L+++ P L + +LS+ N W+LPA EF G+WESLI
Sbjct: 77 G-PKLVDLKVH---NLCIHIFTLNDDSPSTLNLEEEEELSAANLWLLPAVEFHGVWESLI 132
Query: 163 YESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRF 222
YE G+K +LL Y ++ + F++K V+ L++WNR+VLLHGPPGTGKTSLCK LAQKLSIR
Sbjct: 133 YEEGIKTQLLDYVSTTIFFSDKNVDSNLIAWNRVVLLHGPPGTGKTSLCKGLAQKLSIRL 192
Query: 223 SSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAA 282
S RY Q VE+N+HSLFSKWFSESGKLV K+FQKIQE++++++ LVFVLIDEVESL AA
Sbjct: 193 SDRYAHSQFVEINSHSLFSKWFSESGKLVTKMFQKIQELIDDKDALVFVLIDEVESLTAA 252
Query: 283 RKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVG 342
R AA +G+EPSD+IRVVN++LTQ+D++K PNV+ILTTSN+T ID+AFVDRADIK Y+G
Sbjct: 253 RSAAQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSNVTEKIDLAFVDRADIKQYIG 312
Query: 343 PPTLQARYEILRSCLQELIRTGII 366
PP+ +A + I S L+EL++ II
Sbjct: 313 PPSAKAIFNIYLSSLEELMKRQII 336
>FB|FBgn0051453 [details] [associations]
symbol:pch2 species:7227 "Drosophila melanogaster"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
GeneTree:ENSGT00390000017432 EMBL:AY094800 RefSeq:NP_524282.4
UniGene:Dm.2464 SMR:Q8SX76 IntAct:Q8SX76 MINT:MINT-925991
STRING:Q8SX76 EnsemblMetazoa:FBtr0081898 GeneID:41013
KEGG:dme:Dmel_CG31453 UCSC:CG31453-RA CTD:41013 FlyBase:FBgn0051453
InParanoid:Q8SX76 OMA:AMSSNEP OrthoDB:EOG4J3TZK GenomeRNAi:41013
NextBio:821726 Uniprot:Q8SX76
Length = 421
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 167/375 (44%), Positives = 236/375 (62%)
Query: 44 VSVEVCLK---LSSTARIDDVRLAVERMLEK-----RSLSYV--XXXXXXXXXXXFLVEN 93
V VEVCL+ L S A ++V A++ + R++S++ L+E
Sbjct: 10 VHVEVCLRGNDLRSNAIRNNVETALKAYFQTARKLPRNVSFLPDLTAEQTEHVHSVLLER 69
Query: 94 ----VQRICVSDTDEWVKNHDILLFWQVKPVVQVFQLSEEGPCEELSGDGQLSSFNEWIL 149
VQ + V++T + H F+ +P + QL E G + + + +L
Sbjct: 70 DNGGVQPLKVAETK--FRFH----FYATRP--EEGQLGLFSGEEGSDGIDSIVAASHALL 121
Query: 150 PAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTS 209
PA +F G+WE+LIYE+GLK++LL +A SALMF+E V+ +++ NR++LLHGPPGTGKTS
Sbjct: 122 PAAQFVGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTS 181
Query: 210 LCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLV 269
LCKALAQKLSIR Y LVE+N+HSLFSKWFSESGKLVA+LF KI E+V + NNLV
Sbjct: 182 LCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLV 241
Query: 270 FVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDI 329
VLIDEVESLA AR +A+S +EP D++RVVNA+LTQ+D LK+ PNV+IL TSN+ +ID+
Sbjct: 242 CVLIDEVESLAYAR-SAMSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQSIDL 300
Query: 330 AFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISN----FQDCDQSMLPNFSILKE 385
AFVDRADI+ ++G P + A EI + L EL+ G++ +D ++ +L +
Sbjct: 301 AFVDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSV 360
Query: 386 KLSNPDIQEADRSQH 400
LS +++ H
Sbjct: 361 GLSGRTLRKLPLLAH 375
>DICTYBASE|DDB_G0279111 [details] [associations]
symbol:DDB_G0279111 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0279111 GO:GO:0005524 EMBL:AAFI02000027
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_641871.1
ProteinModelPortal:Q54X96 STRING:Q54X96 EnsemblProtists:DDB0235187
GeneID:8621877 KEGG:ddi:DDB_G0279111 InParanoid:Q54X96 OMA:LIEINTH
Uniprot:Q54X96
Length = 373
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 128/237 (54%), Positives = 182/237 (76%)
Query: 115 WQVKPVVQVFQLSEEGPCEELSGDGQLSS-FNEWILPAKEFDGMWESLIYESGLKQRLLH 173
+Q+ +++LS E P ELS D + S + + +LP K + +WE+LIYE GLK +LL
Sbjct: 128 FQINYQTFIYKLSTEPPQSELSDDLETSPPYQQLVLPNKSIETLWENLIYEDGLKSKLLS 187
Query: 174 YAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVE 233
Y ++ ++F++ ++ +VS N+++ L+GPPGTGKTSL KALAQ++SI + RY QL+E
Sbjct: 188 YMSTLILFSKFRIDSNIVSNNKVIFLYGPPGTGKTSLAKALAQRISIVYRDRYQFSQLIE 247
Query: 234 VNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALS-GSEP 292
+N HSLFSKWFSESGKLV K+F+ I+E++E++N V +LIDEVESLAAAR +A++ G+EP
Sbjct: 248 INTHSLFSKWFSESGKLVMKMFENIKELLEDQNCFVMILIDEVESLAAARSSAINNGTEP 307
Query: 293 SDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQAR 349
SDSIRVVNA LTQ+D+LK NV+++ TSNIT A+D+AF+DRADIK ++GPP + AR
Sbjct: 308 SDSIRVVNAFLTQLDQLKQYSNVLVVATSNITKAVDLAFIDRADIKQFIGPPPIDAR 364
>WB|WBGene00008641 [details] [associations]
symbol:pch-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0007126
GO:GO:0006915 EMBL:Z48334 eggNOG:COG0464 GO:GO:0017111 PIR:T20692
RefSeq:NP_495711.1 ProteinModelPortal:Q09535 SMR:Q09535
DIP:DIP-26661N MINT:MINT-1054495 STRING:Q09535 PaxDb:Q09535
EnsemblMetazoa:F10B5.5 GeneID:174313 KEGG:cel:CELE_F10B5.5
UCSC:F10B5.5 CTD:174313 WormBase:F10B5.5
GeneTree:ENSGT00390000017432 HOGENOM:HOG000234557 InParanoid:Q09535
OMA:SEKHVNT NextBio:883480 Uniprot:Q09535
Length = 424
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 130/250 (52%), Positives = 178/250 (71%)
Query: 121 VQVFQLSEEGPCEELSGD--GQLSSFNE--WILPAKEFDGMWESLIYESGLKQRLLHYAA 176
+ V++L ++GP + GD G S W LP EFD +WE+LIY+S LK ++ Y A
Sbjct: 95 IHVYKLHKDGPLSQNIGDDDGDESIIGSQLWQLPCVEFDSIWENLIYDSNLKNEVMSYVA 154
Query: 177 SALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNA 236
+ +EK VN +++ NR++LL GPPGTGKTSLCK LAQ LSIR + +Y + ++E+N+
Sbjct: 155 ALARLSEKHVNTKIINVNRLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINS 214
Query: 237 HSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI 296
HSLFSKWFSESGKLV K+F +I E+ E+E +VFVLIDEVESL R+++ S SEPSD+I
Sbjct: 215 HSLFSKWFSESGKLVQKMFDQIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAI 274
Query: 297 RVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSC 356
R VNALLTQ+D+++ NV+IL TSN+ + +D A VDRADI VG P+ ARY +L+S
Sbjct: 275 RAVNALLTQIDRIRRRDNVLILCTSNLESTLDKALVDRADIVKNVGQPSDFARYSMLKSS 334
Query: 357 LQELIRTGII 366
+ EL R G++
Sbjct: 335 IMELARIGVV 344
>UNIPROTKB|H0YAL2 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC122719
HGNC:HGNC:12307 Ensembl:ENST00000513435 Uniprot:H0YAL2
Length = 249
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 110/224 (49%), Positives = 158/224 (70%)
Query: 54 STARIDDVRLAVERMLEKRSLSYVXXXXXXXXXXXFLVENVQRICVSDTDEWVKNHDILL 113
STA+ +D+ L+V ++L + ++ + FL NVQ + + DT+ VK+ +
Sbjct: 27 STAKKEDINLSVRKLLNRHNIVF-GDYTWTEFDEPFLTRNVQSVSIIDTELKVKDSQPID 85
Query: 114 FWQVKPVVQVFQLSEEGPCEE-LSGDGQ-LSSFNEWILPAKEFDGMWESLIYESGLKQRL 171
+ +FQL+E+GP E L + + + + N W+LPA EF G+W+SL+Y+ +K L
Sbjct: 86 LSACTVALHIFQLNEDGPSSENLEEETENIIAANHWVLPAAEFHGLWDSLVYDVEVKSHL 145
Query: 172 LHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQL 231
L Y + L+F++K VN L++WNR+VLLHGPPGTGKTSLCKALAQKL+IR SSRY QL
Sbjct: 146 LDYVMTTLLFSDKNVNSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQL 205
Query: 232 VEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDE 275
+E+N+HSLFSKWFSESGKLV K+FQKIQ+++++++ LVFVLIDE
Sbjct: 206 IEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKDALVFVLIDE 249
>SGD|S000000390 [details] [associations]
symbol:PCH2 "Nucleolar component of the pachytene checkpoint,
which prevents chrom" species:4932 "Saccharomyces cerevisiae"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=ISA] [GO:0051598 "meiotic
recombination checkpoint" evidence=IMP] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=IGI;IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
SGD:S000000390 GO:GO:0005524 GO:GO:0005694 GO:GO:0005730
EMBL:BK006936 GO:GO:0016887 eggNOG:COG0464 GO:GO:0007131
GO:GO:0051598 GO:GO:0042138 EMBL:U02073
GeneTree:ENSGT00390000017432 EMBL:Z36055 PIR:S46058
RefSeq:NP_009745.2 ProteinModelPortal:P38126 SMR:P38126
DIP:DIP-4661N IntAct:P38126 MINT:MINT-559572 STRING:P38126
EnsemblFungi:YBR186W GeneID:852484 KEGG:sce:YBR186W CYGD:YBR186w
HOGENOM:HOG000115471 OMA:ESGHERT OrthoDB:EOG4897WN NextBio:971462
Genevestigator:P38126 GermOnline:YBR186W Uniprot:P38126
Length = 564
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 87/188 (46%), Positives = 128/188 (68%)
Query: 190 LVSWNRIVLLHGPPGTGKTSLCKALAQKLSIR--FSSRYPQCQ------LVEVNAHSLFS 241
L++ N+++L+HGPPGTGKT+LCKAL QKLS+R FS ++E++ +FS
Sbjct: 303 LITNNKLLLVHGPPGTGKTTLCKALCQKLSVRREFSDGSDTIDTNYKGIIIELSCARIFS 362
Query: 242 KWFSESGKLVAKLFQKIQEMVE-EENNLVFV--LIDEVESLAAARKAALSGSEPSDSIRV 298
KWF ES K ++ +F+ I+E+++ E +F+ LIDEVE++A++R S +E +D IRV
Sbjct: 363 KWFGESSKNISIVFKDIEELLKVNEGRGIFICLLIDEVEAIASSRTNLSSRNESTDGIRV 422
Query: 299 VNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
VN LLTQ+D+LK N + L TSN+ ++D AFVDRAD YVG PT + IL+ C++
Sbjct: 423 VNTLLTQLDRLKKYHNFLALATSNLLDSLDDAFVDRADGVFYVGNPTAEGILHILKVCIE 482
Query: 359 ELIRTGII 366
E+I +GII
Sbjct: 483 EMITSGII 490
Score = 235 (87.8 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 59/185 (31%), Positives = 101/185 (54%)
Query: 141 LSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALM---FAEKGVN-----PFLVS 192
L+ N LP F+G WESL + + +K+RL YA +L F + G + L++
Sbjct: 246 LNLVNISYLPGTTFEGQWESLYFGNNIKERLYSYATISLKIARFKQTGDSNQEDITTLIT 305
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIR--FSSRYPQCQ------LVEVNAHSLFSKWF 244
N+++L+HGPPGTGKT+LCKAL QKLS+R FS ++E++ +FSKWF
Sbjct: 306 NNKLLLVHGPPGTGKTTLCKALCQKLSVRREFSDGSDTIDTNYKGIIIELSCARIFSKWF 365
Query: 245 SESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLT 304
ES K ++ +F+ I+E+++ + ++ + A + + S ++S + + T
Sbjct: 366 GESSKNISIVFKDIEELLKVNEGRGIFICLLIDEVEAIASSRTNLSSRNESTDGIRVVNT 425
Query: 305 QMDKL 309
+ +L
Sbjct: 426 LLTQL 430
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 237 (88.5 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 72/203 (35%), Positives = 102/203 (50%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L +M+AEK + F V+ ++ VL GPPGTGKT L KA+A +
Sbjct: 496 WEDIGGLEEVKRELRETVQMPVMYAEKFLR-FGVTPSKGVLFFGPPGTGKTLLAKAIANE 554
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
S F + V L S WF ES V +F K + V +DE++
Sbjct: 555 CSANF---------ISVKGPELLSMWFGESESNVRDIFDKARAAAP-----CVVFLDELD 600
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A AR A+ S D RVVN LLT+MD + S NV ++ +N ID A + R
Sbjct: 601 SIAKARGASAGDSGGGD--RVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRL 658
Query: 336 DIKAYVGPPTLQARYEILRSCLQ 358
D YV P +AR+ IL++ L+
Sbjct: 659 DQLIYVPLPDEEARFSILQTQLR 681
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
+F G+ P R +L++GPPGTGKT + +A+A + F +N +
Sbjct: 249 LFKSIGIKP-----PRGILMYGPPGTGKTLMARAVANETGAFFFL---------INGPEI 294
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
SK ES + K F++ E+N+ + IDE++S+A R+ +G + +
Sbjct: 295 MSKMAGESESNLRKAFEEA-----EKNSPAIIFIDEIDSIAPKREKT-NGEVERRVVSQL 348
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 354
L+ M K +S+ V+ T + + R D + VG P R EILR
Sbjct: 349 LTLMDGM-KARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILR 402
>UNIPROTKB|E1BZ64 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074466
OMA:KINQQRP EMBL:AADN02076143 IPI:IPI00581598
Ensembl:ENSGALT00000002868 Uniprot:E1BZ64
Length = 466
Score = 213 (80.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 65/221 (29%), Positives = 107/221 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W+ +I K+ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 181 WDDIIGLDAAKRLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 238
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
+ F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 239 CNTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 284
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNITAAIDIAFVDRAD 336
S+ + R +SG E S R+ LL QMD L S +++ +L SN+ +D A + R +
Sbjct: 285 SVMSQR-GTISGGEHEGSRRMKTELLVQMDGLARSDDLVFVLAASNLPWELDSAMLRRLE 343
Query: 337 IKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQSML 377
+ V P +AR ++R L L +G + D D S+L
Sbjct: 344 KRILVDLPNQEARQAMIRHWLPPLSNSGGVELRTDLDYSLL 384
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 216 (81.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 66/204 (32%), Positives = 99/204 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L+ + EK F +S +R VL +GPPGTGKT L KA+A +
Sbjct: 498 WEDIGGLEEVKRELIESVQYPVDHPEK-FQKFGLSPSRGVLFYGPPGTGKTMLAKAVANE 556
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
+ F + V L S WF ES + +F K + V +DE++
Sbjct: 557 CAANF---------ISVKGPELLSMWFGESESNIRDIFDKARAAAP-----CVVFLDELD 602
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A +R ++ G S RVVN LLT+MD + S NV ++ +N +D A V R
Sbjct: 603 SIAKSRGGSV-GDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRL 661
Query: 336 DIKAYVGPPTLQARYEILRSCLQE 359
D YV P +R IL++ L++
Sbjct: 662 DTLVYVPLPDQASREGILKAQLRK 685
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 210 (79.0 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 67/204 (32%), Positives = 97/204 (47%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +KQ L + EK + F +S +R VL +GPPGTGKT L KA+A +
Sbjct: 495 WEDIGGLDEVKQDLREQVQYPVDHPEKFLK-FGLSPSRGVLFYGPPGTGKTMLAKAVANE 553
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
+ F + V L S WF ES + +F K + V +DE++
Sbjct: 554 CAANF---------ISVKGPELLSMWFGESESNIRDIFDKARAAAP-----CIVFLDELD 599
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A AR ++ G S RVVN LLT+MD + S NV ++ +N +D A R
Sbjct: 600 SIAKARGGSV-GDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRL 658
Query: 336 DIKAYVGPPTLQARYEILRSCLQE 359
D YV P R IL++ L++
Sbjct: 659 DSLIYVPLPDELGRLSILKAQLRK 682
Score = 121 (47.7 bits), Expect = 0.00055, P = 0.00055
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
+F G+ P R VLL+GPPGTGKT + +A+A + F +N +
Sbjct: 247 LFKSIGIKP-----PRGVLLYGPPGTGKTLMARAVANETGAFFFL---------INGPEI 292
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
SK ES + K F++ E+N+ + IDE++S+A R+ +G + +
Sbjct: 293 MSKMAGESESNLRKAFEEA-----EKNSPAIIFIDEIDSIAPKREKT-NGEVERRVVSQL 346
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 354
L+ M K +S+ V+ T + + R D + +G P R EIL+
Sbjct: 347 LTLMDGM-KARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQ 400
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 210 (79.0 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 68/225 (30%), Positives = 110/225 (48%)
Query: 137 GDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRI 196
G+ S+ E ++ + + W+ + +K+ L ++ ++ F +S ++
Sbjct: 467 GNSNPSALRETVV--ESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQ-YTKFGLSPSKG 523
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VL +GPPGTGKT L KA+A ++S F + V L S W+ ES + +F
Sbjct: 524 VLFYGPPGTGKTLLAKAVATEVSANF---------ISVKGPELLSMWYGESESNIRDIFD 574
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K + +VF +DE++S+A AR +L G S RVVN LLT+MD + + NV
Sbjct: 575 KARAAAP---TVVF--LDELDSIAKARGGSL-GDAGGASDRVVNQLLTEMDGMNAKKNVF 628
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQE 359
++ +N ID A + R D YV P AR IL + L++
Sbjct: 629 VIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRK 673
Score = 120 (47.3 bits), Expect = 0.00072, P = 0.00072
Identities = 45/160 (28%), Positives = 72/160 (45%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VL++GPPGTGKT + +A+A + F +N + SK ES + K
Sbjct: 249 RGVLMYGPPGTGKTLMARAVANETGAFFFL---------INGPEVMSKMAGESESNLRKA 299
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
F++ E+N + IDE++S+A R +G + + L+ M K +S+
Sbjct: 300 FEEA-----EKNAPAIIFIDEIDSIAPKRDKT-NGEVERRVVSQLLTLMDGM-KARSNVV 352
Query: 315 VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 354
VI T + + R D + +G P R E+LR
Sbjct: 353 VIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLR 392
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 199 (75.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 50/160 (31%), Positives = 87/160 (54%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL+GPPGTGKT L +A+A + C+ + V+ L K+ E ++V +LF
Sbjct: 182 ILLYGPPGTGKTLLARAVAH---------HTDCKFIRVSGSELVQKYIGEGSRMVRELFV 232
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R + GS S+ R + LL Q+D +++ N+
Sbjct: 233 MAREHAP---SIIFM--DEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIK 287
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP+ +AR EILR
Sbjct: 288 VIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILR 327
Score = 43 (20.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 16 EISDQDGIPEQKGVA--GPP 33
E+ + GIP+ KG+ GPP
Sbjct: 169 ELFESLGIPQPKGILLYGPP 188
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 208 (78.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 61/204 (29%), Positives = 97/204 (47%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + G+K+ L + EK F + ++ VL +GPPG GKT L KA+A +
Sbjct: 474 WEDIGGLEGVKRELRETVQYPVEHPEK-FRKFGMQPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V +LF K ++ + DE++
Sbjct: 533 CQANF---------ISIKGPELLTMWFGESEANVRELFDKARQAAP-----CVLFFDELD 578
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A +R ++ G RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 579 SIARSRGSS-QGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRL 637
Query: 336 DIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P L +R IL++CL +
Sbjct: 638 DQLIYIPLPDLPSRVAILKACLNK 661
>UNIPROTKB|E1BAN2 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 OMA:KINQQRP EMBL:DAAA02056924
EMBL:DAAA02056925 IPI:IPI00715568 Ensembl:ENSBTAT00000025744
Uniprot:E1BAN2
Length = 534
Score = 204 (76.9 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 63/221 (28%), Positives = 105/221 (47%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 249 WNDIIGLDAAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 306
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 307 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 352
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNITAAIDIAFVDRAD 336
S+ + R A G E S+R+ LL QMD L S +++ +L SN+ +D A + R +
Sbjct: 353 SVMSQRGTA-PGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLE 411
Query: 337 IKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQSML 377
+ V P+ +AR ++ L + R+ + D + S+L
Sbjct: 412 KRILVDLPSQEAREAMIHHWLPAVSRSSALELRADLEYSLL 452
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 205 (77.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 63/225 (28%), Positives = 105/225 (46%)
Query: 137 GDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRI 196
G+ S+ E ++ WE + +K+ L + EK F +S ++
Sbjct: 461 GNSNPSALRETVVEVPNVS--WEDIGGLENVKRELQETVQYPVEHPEK-FEKFGMSPSKG 517
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VL +GPPG GKT L KA+A + F + + L + WF ES V ++F
Sbjct: 518 VLFYGPPGCGKTLLAKAIANECQANF---------ISIKGPELLTMWFGESEANVREIFD 568
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K ++ + DE++S+A R ++ G + RV+N LLT+MD + + V
Sbjct: 569 KARQSAP-----CVLFFDELDSIATQRGNSV-GDAGGAADRVLNQLLTEMDGMNAKKTVF 622
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQE 359
I+ +N ID A + R D Y+ P ++RY+I +SCL++
Sbjct: 623 IIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRK 667
Score = 121 (47.7 bits), Expect = 0.00054, P = 0.00054
Identities = 40/123 (32%), Positives = 61/123 (49%)
Query: 234 VNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPS 293
+N + SK ES + K F++ E+N + IDE++S+A R+ E
Sbjct: 273 INGPEIMSKLAGESESNLRKAFEEA-----EKNAPSIIFIDEIDSIAPKREKTHGEVER- 326
Query: 294 DSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYE 351
R+V+ LLT MD LKS +VI++ +N +ID A R D + +G P R E
Sbjct: 327 ---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 383
Query: 352 ILR 354
+LR
Sbjct: 384 VLR 386
>UNIPROTKB|K7EIJ8 [details] [associations]
symbol:KATNAL2 "Katanin p60 ATPase-containing subunit
A-like 2" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 EMBL:AC090373 EMBL:AC012254
HGNC:HGNC:25387 Ensembl:ENST00000588433 Uniprot:K7EIJ8
Length = 341
Score = 197 (74.4 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 58/189 (30%), Positives = 97/189 (51%)
Query: 190 LVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGK 249
L W + LL+GPPGTGKT L KA+A + F + ++A ++ SKW +S K
Sbjct: 141 LSPWKGL-LLYGPPGTGKTLLAKAVATECKTTFFN---------ISASTIVSKWRGDSEK 190
Query: 250 LVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKL 309
LV LF+ + + +DE+ES+ + R A SG E S+R+ LL QMD L
Sbjct: 191 LVRVLFELARYHAPST-----IFLDELESVMSQRGTA-SGGEHEGSLRMKTELLVQMDGL 244
Query: 310 KSSPNVI-ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISN 368
S +++ +L SN+ +D A + R + + V P+ +AR ++ L + ++ +
Sbjct: 245 ARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSREARQAMIYHWLPPVSKSRALEL 304
Query: 369 FQDCDQSML 377
+ + S+L
Sbjct: 305 HTELEYSVL 313
>UNIPROTKB|Q8IYT4 [details] [associations]
symbol:KATNAL2 "Katanin p60 ATPase-containing subunit
A-like 2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR006594 Pfam:PF00004 PROSITE:PS00674
PROSITE:PS50896 SMART:SM00382 SMART:SM00667 GO:GO:0005524
GO:GO:0005737 InterPro:IPR013720 Pfam:PF08513 eggNOG:COG0464
HSSP:O75351 GO:GO:0008568 GO:GO:0005874 EMBL:CH471096 EMBL:AC090373
EMBL:AC012254 EMBL:BC034999 EMBL:BI560635 EMBL:DB461284
IPI:IPI00239789 IPI:IPI00894474 RefSeq:NP_112593.2
UniGene:Hs.404137 ProteinModelPortal:Q8IYT4 SMR:Q8IYT4
IntAct:Q8IYT4 STRING:Q8IYT4 PhosphoSite:Q8IYT4 DMDM:189028467
PaxDb:Q8IYT4 PRIDE:Q8IYT4 DNASU:83473 Ensembl:ENST00000245121
Ensembl:ENST00000356157 GeneID:83473 KEGG:hsa:83473 UCSC:uc002lco.3
CTD:83473 GeneCards:GC18P044526 HGNC:HGNC:25387 MIM:614697
neXtProt:NX_Q8IYT4 PharmGKB:PA134921461 HOGENOM:HOG000225146
HOVERGEN:HBG108053 InParanoid:Q8IYT4 OMA:KINQQRP OrthoDB:EOG4P5K8V
GenomeRNAi:83473 NextBio:72401 ArrayExpress:Q8IYT4 Bgee:Q8IYT4
CleanEx:HS_KATNAL2 Genevestigator:Q8IYT4 HAMAP:MF_03025
Uniprot:Q8IYT4
Length = 538
Score = 200 (75.5 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 62/221 (28%), Positives = 106/221 (47%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 253 WNDIIGLDAAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 310
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 311 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 356
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNITAAIDIAFVDRAD 336
S+ + R A SG E S+R+ LL QMD L S +++ +L SN+ +D A + R +
Sbjct: 357 SVMSQRGTA-SGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLE 415
Query: 337 IKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQSML 377
+ V P+ +AR ++ L + ++ + + + S+L
Sbjct: 416 KRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVL 456
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 66/224 (29%), Positives = 106/224 (47%)
Query: 137 GDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRI 196
G+ S+ E ++ + + W+ + +K L ++ ++ F ++ +
Sbjct: 468 GNSNPSALRETVV--ENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQ-YQKFGLAPTKG 524
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VL GPPGTGKT L KA+A ++S F + V L S W+ ES + +F
Sbjct: 525 VLFFGPPGTGKTLLAKAVATEVSANF---------ISVKGPELLSMWYGESESNIRDIFD 575
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K + +VF +DE++S+A AR + G S RVVN LLT+MD + + NV
Sbjct: 576 KARAAAP---TVVF--LDELDSIAKARGGS-HGDAGGASDRVVNQLLTEMDGMNAKKNVF 629
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQ 358
++ +N ID A + R D YV P AR IL++ L+
Sbjct: 630 VIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLR 673
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 44/158 (27%), Positives = 73/158 (46%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+L++GPPGTGKT + +A+A + F +N + SK ES + K F+
Sbjct: 252 ILMYGPPGTGKTIMARAVANETGAFFFL---------INGPEIMSKMAGESESNLRKAFE 302
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+ E+N+ + IDE++S+A R +G + + L+ M K +S+ VI
Sbjct: 303 EA-----EKNSPSIIFIDEIDSIAPKRDKT-NGEVERRVVSQLLTLMDGM-KARSNVVVI 355
Query: 317 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 354
T + + R D + +G P + R EILR
Sbjct: 356 AATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILR 393
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 66/224 (29%), Positives = 106/224 (47%)
Query: 137 GDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRI 196
G+ S+ E ++ + + W+ + +K L ++ ++ F ++ +
Sbjct: 468 GNSNPSALRETVV--ENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQ-YQKFGLAPTKG 524
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VL GPPGTGKT L KA+A ++S F + V L S W+ ES + +F
Sbjct: 525 VLFFGPPGTGKTLLAKAVATEVSANF---------ISVKGPELLSMWYGESESNIRDIFD 575
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K + +VF +DE++S+A AR + G S RVVN LLT+MD + + NV
Sbjct: 576 KARAAAP---TVVF--LDELDSIAKARGGS-HGDAGGASDRVVNQLLTEMDGMNAKKNVF 629
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQ 358
++ +N ID A + R D YV P AR IL++ L+
Sbjct: 630 VIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLR 673
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 44/158 (27%), Positives = 73/158 (46%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+L++GPPGTGKT + +A+A + F +N + SK ES + K F+
Sbjct: 252 ILMYGPPGTGKTIMARAVANETGAFFFL---------INGPEIMSKMAGESESNLRKAFE 302
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+ E+N+ + IDE++S+A R +G + + L+ M K +S+ VI
Sbjct: 303 EA-----EKNSPSIIFIDEIDSIAPKRDKT-NGEVERRVVSQLLTLMDGM-KARSNVVVI 355
Query: 317 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 354
T + + R D + +G P + R EILR
Sbjct: 356 AATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILR 393
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 55/166 (33%), Positives = 86/166 (51%)
Query: 191 VSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKL 250
+S R +LLHGPPG KT+L KA A F S ++ LFS + E L
Sbjct: 317 ISPMRGILLHGPPGCSKTTLAKAAANAAQASFFS---------LSCAELFSMYVGEGEAL 367
Query: 251 VAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK 310
+ FQ+ + +++F DE + +A R S + + R+++ LLT+MD L+
Sbjct: 368 LRNTFQRARLA---SPSIIF--FDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLE 422
Query: 311 SSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
+ +++L +N AID A + R D+ YV PP L+AR+EIL+
Sbjct: 423 EAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQ 468
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 52/170 (30%), Positives = 85/170 (50%)
Query: 191 VSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKL 250
+ W R +LL+GPPGTGKTSL +A+ Q+ L+ ++ HS+ ES K+
Sbjct: 53 LKWPRGLLLYGPPGTGKTSLVRAVVQECD---------AHLIVLSPHSVHRAHAGESEKV 103
Query: 251 VAKLFQKIQE-MVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKL 309
+ + F + V ++ +++F IDE++ L R A +R+ + L T MD
Sbjct: 104 LREAFAEASSHAVSDKPSVIF--IDEIDVLCPRRDA-----RREQDVRIASQLFTLMDSN 156
Query: 310 K---SSPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 354
K S+P V+++ ++N AID A R D V P + R +IL+
Sbjct: 157 KPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQ 206
>UNIPROTKB|J9P5W4 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074466
EMBL:AAEX03005370 EMBL:AAEX03005368 EMBL:AAEX03005369
EMBL:AAEX03005371 Ensembl:ENSCAFT00000045108 Uniprot:J9P5W4
Length = 378
Score = 190 (71.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 58/193 (30%), Positives = 94/193 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W+ +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 93 WDDIIGLDTAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 150
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 151 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 196
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNITAAIDIAFVDRAD 336
S+ + R A G E S+R+ LL QMD L S +++ +L SN+ +D A + R +
Sbjct: 197 SVMSQRGTA-PGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLE 255
Query: 337 IKAYVGPPTLQAR 349
+ V P+ +AR
Sbjct: 256 KRILVDLPSREAR 268
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 190 (71.9 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 52/160 (32%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
V+L+GPPGTGKT L +A+A + C+ + V+ L K+ E ++V +LF
Sbjct: 185 VILYGPPGTGKTLLARAVAH---------HTDCKFIRVSGAELVQKYIGEGSRMVRELFV 235
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ + R SG S+ R + LL Q+D ++S N+
Sbjct: 236 MAREHAP---SIIFM--DEIDSIGSTRVEG-SGGGDSEVQRTMLELLNQLDGFETSKNIK 289
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
I+ +N +D A + R D K PP++ AR EILR
Sbjct: 290 IIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILR 329
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 195 (73.7 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 64/204 (31%), Positives = 100/204 (49%)
Query: 161 LIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSI 220
L + ++ LLH A F G+ P R +L+ GPPG KT + KALA + +
Sbjct: 545 LAMQQAIEWPLLH----ADKFQRLGIKP-----PRGILMFGPPGCSKTMIAKALATESKL 595
Query: 221 RFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLA 280
F S + LFS W ES + V ++F+K +++ +VF DE++++
Sbjct: 596 NFLS---------IKGPELFSMWVGESERAVREVFRKARQVAPA---IVF--FDEIDAIG 641
Query: 281 AARKAALSGSEPSDSI--RVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRAD 336
R GS S+ RV+ LLT++D +++ NV I+ +N ID A + R D
Sbjct: 642 GERSEG-DGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRID 700
Query: 337 IKAYVGPPTLQARYEILRSCLQEL 360
YVG P +AR EIL+ L+ +
Sbjct: 701 RILYVGLPQCEARREILKIKLRAM 724
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 48/172 (27%), Positives = 84/172 (48%)
Query: 194 NRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAK 253
+R +LL+G G GK+ + +A+ R QL+ +N+ ++SK+ E+ + +
Sbjct: 304 SRGLLLYGATGCGKSMVLEAMCAVAEERSQGHV---QLIRINSGEVYSKFLGETEQKLGA 360
Query: 254 LFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN----ALLTQMD-- 307
+F++ L LI++V +L + E SD ++ V+ +LL Q+
Sbjct: 361 IFERAYNHYPHPTLL---LIEDVHNLCPKQ-------ENSDLVKRVSLAFLSLLDQLSSP 410
Query: 308 -KLKSSPNVIILTTSNI-TAAIDIAFVDRADIKAYVGPPTLQARYEILRSCL 357
+LK S ++ T+S I T I R D + +G P+ QAR EI+R CL
Sbjct: 411 SQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVR-CL 461
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 189 (71.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 51/160 (31%), Positives = 88/160 (55%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C+ + V+ L K+ E ++V +LF
Sbjct: 169 VLLYGPPGTGKTLLARAVAH---------HTDCRFIRVSGSELVQKYIGEGSRMVRELFV 219
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R + +GS S+ R + LL Q+D + + N+
Sbjct: 220 MAREHAP---SIIFM--DEIDSIGSSRIDS-AGSGDSEVQRTMLELLNQLDGFEPTKNIK 273
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
I+ +N +D A + R D K PP+++AR +ILR
Sbjct: 274 IIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADILR 313
>UNIPROTKB|J9NYM5 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 EMBL:AAEX03005370 EMBL:AAEX03005368
EMBL:AAEX03005369 EMBL:AAEX03005371 Ensembl:ENSCAFT00000044953
Uniprot:J9NYM5
Length = 431
Score = 190 (71.9 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 58/193 (30%), Positives = 94/193 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W+ +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 225 WDDIIGLDTAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 282
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 283 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 328
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNITAAIDIAFVDRAD 336
S+ + R A G E S+R+ LL QMD L S +++ +L SN+ +D A + R +
Sbjct: 329 SVMSQRGTA-PGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLE 387
Query: 337 IKAYVGPPTLQAR 349
+ V P+ +AR
Sbjct: 388 KRILVDLPSREAR 400
>ZFIN|ZDB-GENE-051113-156 [details] [associations]
symbol:katnal2 "katanin p60 subunit A-like 2"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR006594 Pfam:PF00004 PROSITE:PS50896
SMART:SM00382 SMART:SM00667 ZFIN:ZDB-GENE-051113-156 GO:GO:0005524
InterPro:IPR013720 Pfam:PF08513 eggNOG:COG0464 GO:GO:0017111
CTD:83473 HOGENOM:HOG000225146 HOVERGEN:HBG108053 OrthoDB:EOG4P5K8V
EMBL:BC108056 IPI:IPI00636993 RefSeq:NP_001032491.1
UniGene:Dr.85176 ProteinModelPortal:Q32PM7 SMR:Q32PM7 GeneID:641431
KEGG:dre:641431 InParanoid:Q32PM7 NextBio:20901572 Uniprot:Q32PM7
Length = 485
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 64/230 (27%), Positives = 104/230 (45%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W+ +I K+ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 240 WDDIIGLEAAKRLVKEAVVYPIKYPQLFTG-ILSPWKGL-LLYGPPGTGKTMLAKAVATE 297
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
+ F + ++A S+ SKW +S KLV LF+ + + +DE+E
Sbjct: 298 CNTTFFN---------ISASSIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 343
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKL-KSSPNVIILTTSNITAAIDIAFVDRAD 336
S+ + R G + S R+ LL QMD L +S+ V +L SN+ +D A + R +
Sbjct: 344 SVMSQRGVG-QGGDHEGSRRMKTELLVQMDGLARSNDLVFVLAASNLPWELDHAMLRRLE 402
Query: 337 IKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQSMLPNFSILKEK 386
+ V P+ AR ++ L + TG + + D L EK
Sbjct: 403 KRILVSLPSAPARQAMISHWLPPVSNTGGVELRTELDYDSLAQVQEEAEK 452
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 194 (73.4 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 60/204 (29%), Positives = 98/204 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + + +K + F ++ +R VL +GPPG GKT L KA+A +
Sbjct: 478 WEDIGGLDEVKRELQELVQYPVEYPDKFLK-FGMTPSRGVLFYGPPGCGKTLLAKAIANE 536
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F V + L + WF ES V +F K ++ + DE++
Sbjct: 537 CQANF---------VSIKGPELLTMWFGESEANVRDVFDKARQAAP-----CILFFDELD 582
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A AR +G + RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 583 SIAKARGGG-AGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRL 641
Query: 336 DIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P + +R ILR+ L++
Sbjct: 642 DQLIYIPLPDMPSRTAILRANLRK 665
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 193 (73.0 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 53/176 (30%), Positives = 97/176 (55%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
+F++ G++P R +LLHGPPGTGKT L + +A ++ + ++ +N S+
Sbjct: 254 LFSDFGISP-----PRGILLHGPPGTGKTMLLRCVANSIT--------EAHVLTINGPSI 300
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
SK+ E+ + +F + ++ + +++F+ DE++S+A +R + SG S RVV
Sbjct: 301 VSKYLGETENAIRDIFNEAKKF---QPSIIFM--DEIDSIAPSRTSDDSGETES---RVV 352
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEIL 353
LLT MD + + ++++ +N +ID A R D + +G P ++AR EIL
Sbjct: 353 AQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEIL 408
Score = 149 (57.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 54/209 (25%), Positives = 99/209 (47%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W + + LK++L+ L ++ N VS + VLL+GPPG KT KALA +
Sbjct: 498 WSDIGGQEELKRKLIEVVQLPLEASDSFKN-LGVSSPKGVLLYGPPGCSKTLTAKALATE 556
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
+ F + V +F+K+ ES + + ++F+K + +++F DE++
Sbjct: 557 SGLNF---------LAVKGPEIFNKYVGESERAIREIFRKARAA---SPSIIF--FDEID 602
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF-VDRAD 336
++A R S + S+ + + + +++LK VI+ T+ T R D
Sbjct: 603 AIAGDRDGDSSTTAASNVLTSLLNEIDGVEELKGV--VIVGATNKPTEIDPALLRPGRLD 660
Query: 337 IKAYVGPPTLQARYEILRSCLQEL-IRTG 364
YV PP AR +IL+ C ++ +++G
Sbjct: 661 RHIYVAPPDYDARLQILQKCSRKFNLQSG 689
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 193 (73.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 59/204 (28%), Positives = 94/204 (46%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W + +K+ L + EK + F + +R VL +GPPG GKT L KA+A +
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLK-FGMQPSRGVLFYGPPGCGKTLLAKAIANE 540
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V +F K + + DE++
Sbjct: 541 CQANF---------ISIKGPELLTMWFGESEANVRDVFDKARAAAP-----CVLFFDELD 586
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A AR G S RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 587 SIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRL 646
Query: 336 DIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P +R++IL++ L++
Sbjct: 647 DQLIYIPLPDEASRHQILKASLRK 670
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 193 (73.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 59/204 (28%), Positives = 94/204 (46%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W + +K+ L + EK + F + +R VL +GPPG GKT L KA+A +
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLK-FGMQPSRGVLFYGPPGCGKTLLAKAIANE 540
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V +F K + + DE++
Sbjct: 541 CQANF---------ISIKGPELLTMWFGESEANVRDVFDKARAAAP-----CVLFFDELD 586
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A AR G S RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 587 SIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRL 646
Query: 336 DIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P +R++IL++ L++
Sbjct: 647 DQLIYIPLPDEASRHQILKASLRK 670
>UNIPROTKB|E2RK60 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 EMBL:AAEX03005370 EMBL:AAEX03005368
EMBL:AAEX03005369 EMBL:AAEX03005371 Ensembl:ENSCAFT00000027875
Uniprot:E2RK60
Length = 535
Score = 190 (71.9 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 58/193 (30%), Positives = 94/193 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W+ +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 250 WDDIIGLDTAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 307
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 308 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 353
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNITAAIDIAFVDRAD 336
S+ + R A G E S+R+ LL QMD L S +++ +L SN+ +D A + R +
Sbjct: 354 SVMSQRGTA-PGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLE 412
Query: 337 IKAYVGPPTLQAR 349
+ V P+ +AR
Sbjct: 413 KRILVDLPSREAR 425
>MGI|MGI:1924234 [details] [associations]
symbol:Katnal2 "katanin p60 subunit A-like 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS00674 PROSITE:PS50896 SMART:SM00382
SMART:SM00667 MGI:MGI:1924234 GO:GO:0005524 GO:GO:0005737
InterPro:IPR013720 Pfam:PF08513 eggNOG:COG0464 HSSP:O75351
GO:GO:0008568 GO:GO:0005874 GeneTree:ENSGT00550000074466 CTD:83473
HOGENOM:HOG000225146 HOVERGEN:HBG108053 OMA:KINQQRP
OrthoDB:EOG4P5K8V HAMAP:MF_03025 EMBL:AK017114 EMBL:AC132608
EMBL:BC069977 IPI:IPI00316789 IPI:IPI00462519 IPI:IPI00894847
RefSeq:NP_081997.1 UniGene:Mm.35803 ProteinModelPortal:Q9D3R6
SMR:Q9D3R6 STRING:Q9D3R6 PhosphoSite:Q9D3R6 PRIDE:Q9D3R6
Ensembl:ENSMUST00000026486 Ensembl:ENSMUST00000126153
Ensembl:ENSMUST00000154665 GeneID:71206 KEGG:mmu:71206
UCSC:uc008fqx.1 UCSC:uc008fqz.1 InParanoid:Q9D3R6 NextBio:333285
Bgee:Q9D3R6 Genevestigator:Q9D3R6 Uniprot:Q9D3R6
Length = 539
Score = 190 (71.9 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 60/221 (27%), Positives = 103/221 (46%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 254 WNDIIGLDAAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 311
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 312 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 357
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNITAAIDIAFVDRAD 336
S+ + R + G E S+R+ LL QMD L S +++ +L SN+ +D A + R +
Sbjct: 358 SVMSQR-GMVPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLE 416
Query: 337 IKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQSML 377
+ V P+ +AR ++ L + + + + S+L
Sbjct: 417 KRILVDLPSQEARQAMIYHWLPPVSKNHALELHTQLEYSVL 457
>UNIPROTKB|K7EM02 [details] [associations]
symbol:KATNAL2 "Katanin p60 ATPase-containing subunit
A-like 2" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 EMBL:AC090373 EMBL:AC012254
HGNC:HGNC:25387 Ensembl:ENST00000586198 Uniprot:K7EM02
Length = 128
Score = 167 (63.8 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 48/135 (35%), Positives = 72/135 (53%)
Query: 190 LVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGK 249
L W + LL+GPPGTGKT L KA+A + F + ++A ++ SKW +S K
Sbjct: 8 LSPWKGL-LLYGPPGTGKTLLAKAVATECKTTFFN---------ISASTIVSKWRGDSEK 57
Query: 250 LVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKL 309
LV LF+ + + +DE+ES+ + R A SG E S+R+ LL QMD L
Sbjct: 58 LVRVLFELARYHAPST-----IFLDELESVMSQRGTA-SGGEHEGSLRMKTELLVQMDGL 111
Query: 310 KSSPNVI-ILTTSNI 323
S +++ +L SN+
Sbjct: 112 ARSEDLVFVLAASNL 126
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 192 (72.6 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 62/225 (27%), Positives = 102/225 (45%)
Query: 137 GDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRI 196
G+ S+ E ++ WE + +K+ L + EK F +S ++
Sbjct: 460 GNSNPSALRETVVEVPNVS--WEDIGGLENVKRELQETVQYPVEHPEK-FEKFGMSPSKG 516
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VL +GPPG GKT L KA+A + F + V L + WF ES V ++F
Sbjct: 517 VLFYGPPGCGKTLLAKAIANECQANF---------ISVKGPELLTMWFGESEANVREIFD 567
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K ++ + DE++S+A R + +G + RV+N LLT+MD + + V
Sbjct: 568 KARQSAP-----CVLFFDELDSIATQRGNS-AGDAGGAADRVLNQLLTEMDGMNAKKTVF 621
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQE 359
I+ +N ID A + R D Y+ P +R I ++CL++
Sbjct: 622 IIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRK 666
>UNIPROTKB|J9PBP3 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 OMA:DLEMVLM EMBL:AAEX03005370
EMBL:AAEX03005368 EMBL:AAEX03005369 EMBL:AAEX03005371
Ensembl:ENSCAFT00000042868 Uniprot:J9PBP3
Length = 598
Score = 190 (71.9 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 58/193 (30%), Positives = 94/193 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W+ +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 253 WDDIIGLDTAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 310
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 311 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 356
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNITAAIDIAFVDRAD 336
S+ + R A G E S+R+ LL QMD L S +++ +L SN+ +D A + R +
Sbjct: 357 SVMSQRGTA-PGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLE 415
Query: 337 IKAYVGPPTLQAR 349
+ V P+ +AR
Sbjct: 416 KRILVDLPSREAR 428
>RGD|1564708 [details] [associations]
symbol:Katnal2 "katanin p60 subunit A-like 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
RGD:1564708 GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513
GO:GO:0017111 GeneTree:ENSGT00550000074466 IPI:IPI00367223
Ensembl:ENSRNOT00000048702 Uniprot:F1M5A4
Length = 522
Score = 189 (71.6 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 57/197 (28%), Positives = 95/197 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 237 WNDIIGLDAAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 294
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 295 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 340
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNITAAIDIAFVDRAD 336
S+ + R + G E S+R+ LL QMD L S +++ +L SN+ +D A + R +
Sbjct: 341 SVMSQR-GMVPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLE 399
Query: 337 IKAYVGPPTLQARYEIL 353
+ V P+ +AR ++
Sbjct: 400 KRILVDLPSQEARQAMI 416
>GENEDB_PFALCIPARUM|PFD0390c [details] [associations]
symbol:PFD0390c "AAA family ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016887 HSSP:Q01853 EMBL:AL844503
RefSeq:XP_001351393.1 ProteinModelPortal:Q9U0K7 IntAct:Q9U0K7
MINT:MINT-1559100 EnsemblProtists:PFD0390c:mRNA GeneID:812364
KEGG:pfa:PFD0390c EuPathDB:PlasmoDB:PF3D7_0407900
HOGENOM:HOG000283994 OMA:NIPNASI ProtClustDB:CLSZ2433158
Uniprot:Q9U0K7
Length = 667
Score = 189 (71.6 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 64/198 (32%), Positives = 96/198 (48%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL GPPGTGKT + K +A +C VN SLFSK+ E+ K+V LF
Sbjct: 427 ILLFGPPGTGKTMVAKWVASSC---------KCSFYNVNTSSLFSKYIGETEKIVTALF- 476
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K E V+ + L F DE++SL RK E +IR+ N LL +D + + ++I
Sbjct: 477 KCAE-VDNPSILFF---DEIDSLLGTRKK----DEDDTTIRIKNQLLQMIDGINTKKDII 528
Query: 317 ILT--TSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQ 374
I+ +N ID A + R + + Y+ P AR E +R + + +G FQ ++
Sbjct: 529 IVIIGATNRPDMIDDAALRRFNKRVYIPLPDFNARKEQIRYIISKHTHSG----FQLTEE 584
Query: 375 SMLPNFSILKEKLSNPDI 392
L S+ E + DI
Sbjct: 585 E-LDAISVKLENWNGSDI 601
Score = 45 (20.9 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 93 NVQRICVS---DTDEWVKNHDILLFWQVKPVVQ 122
N+ R +S D++E VK DI+ + +K +++
Sbjct: 372 NIIRYALSMKMDSNEQVKESDIIGLYDIKKIIK 404
Score = 38 (18.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGV 186
W SLI E G++ ++ YA S M + + V
Sbjct: 362 W-SLI-EQGIEVNIIRYALSMKMDSNEQV 388
>UNIPROTKB|Q9U0K7 [details] [associations]
symbol:PFD0390c "AAA family ATPase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0016887 HSSP:Q01853 EMBL:AL844503 RefSeq:XP_001351393.1
ProteinModelPortal:Q9U0K7 IntAct:Q9U0K7 MINT:MINT-1559100
EnsemblProtists:PFD0390c:mRNA GeneID:812364 KEGG:pfa:PFD0390c
EuPathDB:PlasmoDB:PF3D7_0407900 HOGENOM:HOG000283994 OMA:NIPNASI
ProtClustDB:CLSZ2433158 Uniprot:Q9U0K7
Length = 667
Score = 189 (71.6 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 64/198 (32%), Positives = 96/198 (48%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL GPPGTGKT + K +A +C VN SLFSK+ E+ K+V LF
Sbjct: 427 ILLFGPPGTGKTMVAKWVASSC---------KCSFYNVNTSSLFSKYIGETEKIVTALF- 476
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K E V+ + L F DE++SL RK E +IR+ N LL +D + + ++I
Sbjct: 477 KCAE-VDNPSILFF---DEIDSLLGTRKK----DEDDTTIRIKNQLLQMIDGINTKKDII 528
Query: 317 ILT--TSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQ 374
I+ +N ID A + R + + Y+ P AR E +R + + +G FQ ++
Sbjct: 529 IVIIGATNRPDMIDDAALRRFNKRVYIPLPDFNARKEQIRYIISKHTHSG----FQLTEE 584
Query: 375 SMLPNFSILKEKLSNPDI 392
L S+ E + DI
Sbjct: 585 E-LDAISVKLENWNGSDI 601
Score = 45 (20.9 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 93 NVQRICVS---DTDEWVKNHDILLFWQVKPVVQ 122
N+ R +S D++E VK DI+ + +K +++
Sbjct: 372 NIIRYALSMKMDSNEQVKESDIIGLYDIKKIIK 404
Score = 38 (18.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGV 186
W SLI E G++ ++ YA S M + + V
Sbjct: 362 W-SLI-EQGIEVNIIRYALSMKMDSNEQV 388
>POMBASE|SPAC1834.11c [details] [associations]
symbol:sec18 "secretory pathway protein Sec18
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 PomBase:SPAC1834.11c Pfam:PF02359 GO:GO:0005524
GO:GO:0005737 GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 eggNOG:COG0464 GO:GO:0006888 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 PIR:T50122 RefSeq:NP_594690.1
ProteinModelPortal:Q9P7Q4 STRING:Q9P7Q4 EnsemblFungi:SPAC1834.11c.1
GeneID:2542410 KEGG:spo:SPAC1834.11c OrthoDB:EOG4PVS6W
NextBio:20803469 Uniprot:Q9P7Q4
Length = 792
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 54/192 (28%), Positives = 97/192 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL+GPPGTGKT + + + + L+ +R P+ VN + +K+ +S + V KLF
Sbjct: 307 ILLYGPPGTGKTLIARQIGKMLN----AREPKI----VNGPEILNKYVGQSEENVRKLFA 358
Query: 257 KIQEMVE---EENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
+ EE+ L ++ DE++++ +K SG + +VVN LL +MD +
Sbjct: 359 DAEREYRDRGEESGLHIIIFDELDAIC--KKRGSSGGDTGVGDQVVNQLLAKMDGVDQLN 416
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQD 371
N++++ +N ID A + R ++ + P R +IL+ + GI+ N D
Sbjct: 417 NILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVD 476
Query: 372 CDQ--SMLPNFS 381
++ S+ NFS
Sbjct: 477 MEELASLTKNFS 488
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/160 (31%), Positives = 87/160 (54%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
V+L+GPPGTGKT L +A+A + +C+ + V+ L K+ E ++V +LF
Sbjct: 181 VILYGPPGTGKTLLARAVAH---------HTECKFIRVSGSELVQKYIGEGSRMVRELFV 231
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +SS ++
Sbjct: 232 MAREHAP---SIIFM--DEIDSIGSSRVEGSSGGD-SEVQRTMLELLNQLDGFESSKDIK 285
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
I+ +N +D A + R D K PT+ AR +IL+
Sbjct: 286 IIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDILK 325
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 183 (69.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 49/160 (30%), Positives = 87/160 (54%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + +C + V+ L K+ E ++V +LF
Sbjct: 185 VLLYGPPGTGKTLLARAVAH---------HTECTFIRVSGSELVQKFIGEGSRMVRELFV 235
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R + SG + S+ R + LL Q+D +++ N+
Sbjct: 236 MAREHAP---SIIFM--DEIDSIGSSRIESGSGGD-SEVQRTMLELLNQLDGFEATKNIK 289
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 290 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILK 329
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 189 (71.6 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 67/224 (29%), Positives = 107/224 (47%)
Query: 142 SSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRI---VL 198
S+ E IL + + WE + ++ +K +L+ A+ + +K + F R +L
Sbjct: 709 SAMREVILEVPKVN--WEDVGGQNEVKNQLME----AVEWPQKHQDAFKRIGTRPPSGIL 762
Query: 199 LHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKI 258
+ GPPG KT + +A+A + + F + V LFSKW ES K V LF K
Sbjct: 763 MFGPPGCSKTLMARAVASEAKLNF---------LAVKGPELFSKWVGESEKAVRSLFAKA 813
Query: 259 QEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIIL 318
+ +++F DE++SLA+ R G SD RV++ LL ++D L V ++
Sbjct: 814 RANAP---SIIF--FDEIDSLASIRGKENDGVSVSD--RVMSQLLVELDGLHQRVGVTVI 866
Query: 319 TTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQEL 360
+N ID A + R D YVGPP R IL+ L+++
Sbjct: 867 AATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKI 910
Score = 121 (47.7 bits), Expect = 0.00071, P = 0.00071
Identities = 46/162 (28%), Positives = 71/162 (43%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VL+HGPPGTGKTSL + A+ + F S VN + S++ ES K + ++F+
Sbjct: 421 VLIHGPPGTGKTSLARTFARHSGVNFFS---------VNGPEIISQYLGESEKALDEVFR 471
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+VF ID+++++A ARK G E S + L VI
Sbjct: 472 SASNATPA---VVF--IDDLDAIAPARKEG--GEELSQRMVATLLNLMDGISRTDGVVVI 524
Query: 317 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
T + + R D + +G P+ R +IL L+
Sbjct: 525 AATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILR 566
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 182 (69.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 49/160 (30%), Positives = 86/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + +C + V+ L K+ E ++V +LF
Sbjct: 180 VLLYGPPGTGKTLLARAVAH---------HTECTFIRVSGSELVQKFIGEGSRMVRELFV 230
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ +AR +G+ S+ R + LL Q+D +++ N+
Sbjct: 231 MAREHAP---SIIFM--DEIDSIGSARLE--TGTGDSEVQRTMLELLNQLDGFEATKNIK 283
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 284 VIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILK 323
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 186 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 236
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 237 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 290
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 186 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 236
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 237 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 290
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 186 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 236
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 237 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 290
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 186 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 236
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 237 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 290
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 186 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 236
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 237 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 290
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 186 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 236
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 237 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 290
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 186 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 236
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 237 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 290
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 291 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 182 (69.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 192 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 242
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 243 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 296
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 297 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 336
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 182 (69.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 194 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 244
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 245 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 298
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 299 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 338
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 182 (69.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 194 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 244
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 245 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 298
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 299 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 338
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 198 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKYIGEGSRMVRELFV 248
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ +AR + SG+ S+ R + LL Q+D ++S +
Sbjct: 249 MAREHAP---SIIFM--DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIK 303
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
+L +N +D A + R D K P ++R++IL+
Sbjct: 304 VLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILK 343
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 198 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKYIGEGSRMVRELFV 248
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ +AR + SG+ S+ R + LL Q+D ++S +
Sbjct: 249 MAREHAP---SIIFM--DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIK 303
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
+L +N +D A + R D K P ++R++IL+
Sbjct: 304 VLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILK 343
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 208 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 266
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 267 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 312
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 313 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 370
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 371 LDQLIYIPLPDEKSRVAILKANLRK 395
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 186 (70.5 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 59/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLDDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + S NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNVGDGGGAAD--RVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRIAILKANLRK 663
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 474 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 533 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 578
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 579 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 636
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 637 LDQLIYIPLPDEKSRVAILKANLRK 661
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRIAILKANLRK 663
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRK 663
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRK 663
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRK 663
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRK 663
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRK 663
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 184 (69.8 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRK 663
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 184 (69.8 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 480 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 538
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 539 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 584
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 585 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 642
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 643 LDQLIYIPLPDEKSRVAILKANLRK 667
Score = 158 (60.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 54/177 (30%), Positives = 84/177 (47%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
+F GV P R +LL+GPPGTGKT + +A+A + F +N +
Sbjct: 229 LFKAIGVKP-----PRGILLYGPPGTGKTLIARAVANETGAFFFL---------INGPEI 274
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
SK ES + K F++ E+N + IDE++++A+ + R+V
Sbjct: 275 MSKLAGESESNLRKAFEET-----EKNAPAIIFIDELDAIASDDCFPSPQTHGEVERRIV 329
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 354
+ LLT MD LK +VI++ +N +ID A R D + +G P R EIL+
Sbjct: 330 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 386
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 184 (69.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 492 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 550
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 551 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 596
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 597 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 654
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 655 LDQLIYIPLPDEKSRVAILKANLRK 679
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 189 (71.6 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 60/205 (29%), Positives = 97/205 (47%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W+ + SG+++ L + + + +K N + S VL++GPPG GKT L KA+A +
Sbjct: 565 WDDVGALSGVREELTNSILRPIRYPKKYKNMGIDS-PAGVLMYGPPGCGKTLLAKAIASE 623
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + V L +K+ ES + V ++FQ+ ++ + DE +
Sbjct: 624 CQANF---------ISVKGPELLNKYVGESERAVRQVFQRAAA-----SSPCVIFFDEFD 669
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
+LA R G + RVVN LLT+MD L+ V I+ +N ID A R
Sbjct: 670 ALAPKRGGGDGGGNQATE-RVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRL 728
Query: 336 DIKAYVGPPTLQARYEILRSCLQEL 360
D YV P+ + R EIL++ ++
Sbjct: 729 DKMVYVPLPSPEERCEILKTLTHKI 753
Score = 40 (19.1 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 53 SSTARIDDVRLAVERMLEKRSL 74
SST I+++ L+ E ++ K L
Sbjct: 505 SSTTNINNIGLSTELLISKEPL 526
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 183 (69.5 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLEDVKRELQDLVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRK 663
>FB|FBgn0029656 [details] [associations]
symbol:CG10793 species:7227 "Drosophila melanogaster"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR006594 Pfam:PF00004 PROSITE:PS50896 SMART:SM00382
SMART:SM00667 GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513
eggNOG:COG0464 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY089357
ProteinModelPortal:Q8T446 SMR:Q8T446 PRIDE:Q8T446
FlyBase:FBgn0029656 InParanoid:Q8T446 OrthoDB:EOG44MW83 Bgee:Q8T446
Uniprot:Q8T446
Length = 479
Score = 179 (68.1 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 61/184 (33%), Positives = 90/184 (48%)
Query: 167 LKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRY 226
+K+ +L +FA G+ P W R +LLHGPPG+GKT L KAL +S
Sbjct: 218 IKEAVLTPIEFPQLFAH-GLKP----W-RSLLLHGPPGSGKTLLAKAL-------YSETQ 264
Query: 227 PQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAA 286
Q + A + SKW ES K++ LF + +++F DE+ESL + R A
Sbjct: 265 GQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAP---SVIF--FDEIESLTSKRDRA 319
Query: 287 LSGSEPSDSIRVVNALLTQMDKLKSSPN-VIILTTSNITAAIDIAFVDRADIKAYVGPPT 345
++ S R N LL +D ++ S N V +L ++N+ ID AF+ R + K V P
Sbjct: 320 ---TDHESSKRFKNELLQLLDGMEHSLNGVFVLASTNLPWDIDEAFLRRFEKKLLVQLPN 376
Query: 346 LQAR 349
R
Sbjct: 377 AAER 380
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 178 (67.7 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 54/172 (31%), Positives = 85/172 (49%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
++ + G++P R VLL+GPPGTGKT L KA+A F + VN
Sbjct: 197 LYEQIGIDP-----PRGVLLYGPPGTGKTMLVKAVANSTKAAF---------IRVNGSEF 242
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
K+ E ++V +F+ + EN + IDEV+S+A R A +GS+ + R++
Sbjct: 243 VHKYLGEGPRMVRDVFR-----LARENAPSIIFIDEVDSIATKRFDAQTGSD-REVQRIL 296
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYE 351
LLTQMD S NV ++ +N +D A + + + P+L+ R E
Sbjct: 297 IELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 348
>TAIR|locus:2038678 [details] [associations]
symbol:SKD1 "SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005771 "multivesicular body"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0016192 "vesicle-mediated transport" evidence=RCA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0010091 "trichome branching"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006869 "lipid transport"
evidence=RCA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016197
"endosomal transport" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0009506
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GO:GO:0016192
Pfam:PF04212 HSSP:Q01853 GO:GO:0017111 EMBL:AC006232 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005771 GO:GO:0007033
EMBL:AC005824 GO:GO:0010091 SMART:SM00745 HOGENOM:HOG000225146
UniGene:At.13265 KO:K12196 OMA:FTGKRIP EMBL:AF367297 EMBL:AY091684
IPI:IPI00544233 PIR:F84674 RefSeq:NP_180328.1 SMR:Q9ZNT0
IntAct:Q9ZNT0 STRING:Q9ZNT0 EnsemblPlants:AT2G27600.1 GeneID:817306
KEGG:ath:AT2G27600 TAIR:At2g27600 InParanoid:Q9ZNT0
ProtClustDB:CLSN2683515 Genevestigator:Q9ZNT0 Uniprot:Q9ZNT0
Length = 435
Score = 178 (67.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 54/162 (33%), Positives = 81/162 (50%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R LL+GPPGTGK+ L KA+A + F S V++ L SKW ES KLV+
Sbjct: 165 W-RAFLLYGPPGTGKSYLAKAVATEADSTFFS---------VSSSDLVSKWMGESEKLVS 214
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LF+ +E +++FV DE++SL R + SE S I+ L+ +
Sbjct: 215 NLFEMARESAP---SIIFV--DEIDSLCGTRGEG-NESEASRRIKT-ELLVQMQGVGHND 267
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 354
V++L +N A+D A R D + Y+ P +AR + +
Sbjct: 268 EKVLVLAATNTPYALDQAIRRRFDKRIYIPLPEAKARQHMFK 309
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 57/204 (27%), Positives = 91/204 (44%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W + +K+ L + EK F +S ++ VL +GPPG GKT L KA+A +
Sbjct: 479 WNDIGGLENVKRELQETVQYPVEHPEK-FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 537
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + V L + WF ES V ++F K ++ + DE++
Sbjct: 538 CQANF---------ISVKGPELLTMWFGESEANVREIFDKARQSAP-----CVLFFDELD 583
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A R G + RV+N LLT+MD + + V I+ +N ID A + R
Sbjct: 584 SIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRL 643
Query: 336 DIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P +R I ++ L++
Sbjct: 644 DQLIYIPLPDEDSRLNIFKAALRK 667
>TAIR|locus:2062274 [details] [associations]
symbol:CCP1 "conserved in ciliated species and in the
land plants 1" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019538
"protein metabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0017111 EMBL:AK317096
EMBL:AK317118 IPI:IPI00534781 RefSeq:NP_973600.1 UniGene:At.47485
UniGene:At.61738 ProteinModelPortal:B9DGC0 SMR:B9DGC0 PRIDE:B9DGC0
EnsemblPlants:AT2G34560.2 GeneID:818020 KEGG:ath:AT2G34560
TAIR:At2g34560 OMA:EQNGHAN PhylomeDB:B9DGC0 Genevestigator:Q3EBN1
Uniprot:B9DGC0
Length = 393
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 61/195 (31%), Positives = 94/195 (48%)
Query: 158 WESLIYESGLK--QRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALA 215
WES+ GL+ ++LL A + N L W I LL GPPGTGKT L KA+A
Sbjct: 111 WESI---KGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGI-LLFGPPGTGKTMLAKAVA 166
Query: 216 QKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDE 275
+ + F + ++A S+ SKW +S KL+ LF + + +DE
Sbjct: 167 TECNTTFFN---------ISASSVVSKWRGDSEKLIRVLFDLARHHAPST-----IFLDE 212
Query: 276 VESLAAARKAALSGSEPSDSIRVVNALLTQMDKL-KSSPNVIILTTSNITAAIDIAFVDR 334
++++ + R SE S R+ LL QMD L K++ V +L +N+ +D A + R
Sbjct: 213 IDAIISQRGGE-GRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLRR 271
Query: 335 ADIKAYVGPPTLQAR 349
+ + V P +AR
Sbjct: 272 LEKRILVPLPDPEAR 286
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K+ L + +K + F ++ ++ VL +GPPG GKT L KA+A +
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLK-FGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V ++F K ++ + DE++
Sbjct: 535 CQANF---------ISIKGPELLTMWFGESEANVREIFDKARQAAP-----CVLFFDELD 580
Query: 278 SLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DR 334
S+A AR + G +D RV+N +LT+MD + NV I+ +N ID A + R
Sbjct: 581 SIAKARGGNIGDGGGAAD--RVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 335 ADIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P ++R IL++ L++
Sbjct: 639 LDQLIYIPLPDEKSRMAILKANLRK 663
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/223 (29%), Positives = 106/223 (47%)
Query: 142 SSFNEWIL--PAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLL 199
SS E ++ P ++D + +S L++ +L+ F + G++P +R VL
Sbjct: 465 SSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSP-----SRGVLF 519
Query: 200 HGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQ 259
+GPPG GKT L KA+A + S F V + L + WF ES V ++F K +
Sbjct: 520 YGPPGCGKTLLAKAVASECSANF---------VSIKGPELLTMWFGESEANVREVFDKAR 570
Query: 260 EMVEEENNLVFVLIDEVESLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIIL 318
+ DE++S+ R ++L GS D RV+N LLT++D + N+ +
Sbjct: 571 AAAP-----CVLFFDELDSIGTQRGSSLGDGSGAGD--RVMNQLLTEIDGVGPKKNLFFI 623
Query: 319 TTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQE 359
+N +D A + R D Y+ P L AR IL + L++
Sbjct: 624 GATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRK 666
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/223 (29%), Positives = 106/223 (47%)
Query: 142 SSFNEWIL--PAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLL 199
SS E ++ P ++D + +S L++ +L+ F + G++P +R VL
Sbjct: 465 SSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSP-----SRGVLF 519
Query: 200 HGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQ 259
+GPPG GKT L KA+A + S F V + L + WF ES V ++F K +
Sbjct: 520 YGPPGCGKTLLAKAVASECSANF---------VSIKGPELLTMWFGESEANVREVFDKAR 570
Query: 260 EMVEEENNLVFVLIDEVESLAAARKAALS-GSEPSDSIRVVNALLTQMDKLKSSPNVIIL 318
+ DE++S+ R ++L GS D RV+N LLT++D + N+ +
Sbjct: 571 AAAP-----CVLFFDELDSIGTQRGSSLGDGSGAGD--RVMNQLLTEIDGVGPKKNLFFI 623
Query: 319 TTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQE 359
+N +D A + R D Y+ P L AR IL + L++
Sbjct: 624 GATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRK 666
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 178 (67.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 57/204 (27%), Positives = 94/204 (46%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W + +K+ L + EK + F + +R VL +GPPG GKT L KA+A +
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLK-FGMQPSRGVLFYGPPGCGKTLLAKAIANE 539
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V +F K + + DE++
Sbjct: 540 CQANF---------ISIKGPELLTMWFGESEANVRDVFDKARAAAP-----CVLFFDELD 585
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A AR ++ G + RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 586 SIAKARGGSV-GDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRL 644
Query: 336 DIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P +R +I ++ L++
Sbjct: 645 DQLIYIPLPDEASRLQIFKASLRK 668
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 178 (67.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 57/204 (27%), Positives = 94/204 (46%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W + +K+ L + EK + F + +R VL +GPPG GKT L KA+A +
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLK-FGMQPSRGVLFYGPPGCGKTLLAKAIANE 539
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + + L + WF ES V +F K + + DE++
Sbjct: 540 CQANF---------ISIKGPELLTMWFGESEANVRDVFDKARAAAP-----CVLFFDELD 585
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRA 335
S+A AR ++ G + RV+N +LT+MD + + NV I+ +N ID A + R
Sbjct: 586 SIAKARGGSV-GDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRL 644
Query: 336 DIKAYVGPPTLQARYEILRSCLQE 359
D Y+ P +R +I ++ L++
Sbjct: 645 DQLIYIPLPDEASRLQIFKASLRK 668
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 173 (66.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 50/166 (30%), Positives = 85/166 (51%)
Query: 191 VSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKL 250
+S + VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++
Sbjct: 210 ISQPKGVLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKYIGEGSRM 260
Query: 251 VAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK 310
V +LF +E +++F+ DE++S+ + R G S+ R + LL Q+D +
Sbjct: 261 VRELFVMAREHAP---SIIFM--DEIDSIGSQRIEGEHGD--SEVQRTMMELLNQLDGFE 313
Query: 311 SSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
S+ N+ ++ +N +D A + R D K P ++AR EIL+
Sbjct: 314 STQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILK 359
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 173 (66.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 50/166 (30%), Positives = 85/166 (51%)
Query: 191 VSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKL 250
+S + VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++
Sbjct: 210 ISQPKGVLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKYIGEGSRM 260
Query: 251 VAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK 310
V +LF +E +++F+ DE++S+ + R G S+ R + LL Q+D +
Sbjct: 261 VRELFVMAREHAP---SIIFM--DEIDSIGSQRIEGEHGD--SEVQRTMMELLNQLDGFE 313
Query: 311 SSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
S+ N+ ++ +N +D A + R D K P ++AR EIL+
Sbjct: 314 STQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILK 359
>MGI|MGI:1100499 [details] [associations]
symbol:Vps4b "vacuolar protein sorting 4b (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005764
"lysosome" evidence=ISO] [GO:0005768 "endosome" evidence=ISO]
[GO:0005769 "early endosome" evidence=ISO] [GO:0005770 "late
endosome" evidence=ISO] [GO:0005774 "vacuolar membrane"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0007032 "endosome organization" evidence=IMP] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0010008 "endosome membrane" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IMP] [GO:0032367 "intracellular
cholesterol transport" evidence=ISO] [GO:0032510 "endosome to
lysosome transport via multivesicular body sorting pathway"
evidence=ISO] [GO:0033993 "response to lipid" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1100499
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005774
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0005768
GO:GO:0005764 GO:GO:0016887 GO:GO:0016197 GO:GO:0032367
GO:GO:0006813 GO:GO:0033993 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0007032 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005769 GO:GO:0030301 HOVERGEN:HBG057074 SMART:SM00745
HOGENOM:HOG000225146 GO:GO:0032510 KO:K12196 OrthoDB:EOG4G1MGD
CTD:9525 OMA:AKCAEYL EMBL:U10119 EMBL:AF134119 EMBL:BC003799
IPI:IPI00133700 PIR:S48696 RefSeq:NP_033216.2 UniGene:Mm.18705
UniGene:Mm.483448 PDB:2ZAM PDB:2ZAN PDB:2ZAO PDBsum:2ZAM
PDBsum:2ZAN PDBsum:2ZAO ProteinModelPortal:P46467 SMR:P46467
STRING:P46467 PhosphoSite:P46467 PaxDb:P46467 PRIDE:P46467
Ensembl:ENSMUST00000094646 Ensembl:ENSMUST00000112736 GeneID:20479
KEGG:mmu:20479 InParanoid:P46467 EvolutionaryTrace:P46467
NextBio:298605 Bgee:P46467 CleanEx:MM_VPS4B Genevestigator:P46467
GermOnline:ENSMUSG00000009907 Uniprot:P46467
Length = 444
Score = 173 (66.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + +++ L SKW ES KLV
Sbjct: 167 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSISSSDLVSKWLGESEKLVK 217
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LFQ + EN + IDE++SL +R + SE + I+ L+ +
Sbjct: 218 NLFQ-----LARENKPSIIFIDEIDSLCGSRSE--NESEAARRIKT-EFLVQMQGVGVDN 269
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDC 372
+++L +NI +D A R + + Y+ P AR + R L + ++FQ+
Sbjct: 270 DGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQEL 329
Query: 373 ----DQSMLPNFSIL-KEKLSNPDIQEADRSQHFYK 403
D + SI+ ++ L P +++ + HF K
Sbjct: 330 GRKTDGYSGADISIIVRDALMQP-VRKVQSATHFKK 364
>RGD|1305969 [details] [associations]
symbol:Vps4b "vacuolar protein sorting 4 homolog B (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0005770 "late endosome" evidence=IEA;ISO]
[GO:0005774 "vacuolar membrane" evidence=IEA;ISO] [GO:0005829
"cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006813 "potassium ion transport"
evidence=IEA;ISO] [GO:0007032 "endosome organization"
evidence=IEA;ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010008 "endosome membrane" evidence=IEA;ISO] [GO:0016197
"endosomal transport" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=IEA;ISO] [GO:0030301 "cholesterol transport" evidence=ISO]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA;ISO]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA;ISO] [GO:0033993 "response to lipid"
evidence=IEA;ISO] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:1305969 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
EMBL:CH474000 KO:K12196 OrthoDB:EOG4G1MGD CTD:9525 EMBL:BC099128
IPI:IPI00363819 RefSeq:NP_001020887.1 UniGene:Rn.25893 SMR:Q4KLL7
STRING:Q4KLL7 Ensembl:ENSRNOT00000003715 GeneID:360834
KEGG:rno:360834 UCSC:RGD:1305969 InParanoid:Q4KLL7 OMA:XKRTPWR
NextBio:674292 Genevestigator:Q4KLL7 Uniprot:Q4KLL7
Length = 444
Score = 173 (66.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + +++ L SKW ES KLV
Sbjct: 167 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSISSSDLVSKWLGESEKLVK 217
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LFQ + EN + IDE++SL +R + SE + I+ L+ +
Sbjct: 218 NLFQ-----LARENKPSIIFIDEIDSLCGSRSE--NESEAARRIKT-EFLVQMQGVGVDN 269
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDC 372
+++L +NI +D A R + + Y+ P AR + R L + ++FQ+
Sbjct: 270 DGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQEL 329
Query: 373 ----DQSMLPNFSIL-KEKLSNPDIQEADRSQHFYK 403
D + SI+ ++ L P +++ + HF K
Sbjct: 330 GRKTDGYSGADISIIVRDALMQP-VRKVQSATHFKK 364
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 172 (65.6 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 49/172 (28%), Positives = 87/172 (50%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
++ + G++P R VLL+GPPGTGKT L KA+A + F + VN
Sbjct: 191 LYKQIGIDP-----PRGVLLYGPPGTGKTMLVKAVANSTTASF---------IRVNGSEF 236
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
K+ E ++V +F+ + EN+ + IDE++++A R A +G++ + R++
Sbjct: 237 VQKYLGEGPRMVRDVFR-----MARENSPAIIFIDEIDAIATKRFDAQTGAD-REVQRIL 290
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYE 351
LL QMD + + NV ++ +N +D A + + + P+L+ R E
Sbjct: 291 LELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 342
>WB|WBGene00021334 [details] [associations]
symbol:vps-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0018996
GO:GO:0040011 GO:GO:0000003 Pfam:PF04212 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 GO:GO:0043652
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL EMBL:FO080952 RefSeq:NP_490816.4
ProteinModelPortal:Q9BL83 SMR:Q9BL83 IntAct:Q9BL83
MINT:MINT-6670337 STRING:Q9BL83 PaxDb:Q9BL83
EnsemblMetazoa:Y34D9A.10.1 EnsemblMetazoa:Y34D9A.10.2 GeneID:189590
KEGG:cel:CELE_Y34D9A.10 UCSC:Y34D9A.10 CTD:189590
WormBase:Y34D9A.10 InParanoid:Q9BL83 NextBio:942940 Uniprot:Q9BL83
Length = 430
Score = 172 (65.6 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 62/214 (28%), Positives = 103/214 (48%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W I LL GPPGTGK+ + KA+A + + +++ L SKW ES KLV
Sbjct: 151 WQGI-LLFGPPGTGKSYIAKAVATEAG--------ESTFFSISSSDLMSKWLGESEKLVK 201
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LF +E + +++F IDE++SL +AR + SE + I+ + Q L +
Sbjct: 202 NLFALARE---HKPSIIF--IDEIDSLCSARSD--NESESARRIKTEFMVQMQGVGLNND 254
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNF--- 369
+++L +NI +D A R + + Y+ P + AR E+ R + + T +F
Sbjct: 255 -GILVLGATNIPWILDSAIRRRFEKRIYIPLPDIHARKEMFRIDVGKNYNTLTDQDFKVL 313
Query: 370 -QDCDQSMLPNFSIL-KEKLSNPDIQEADRSQHF 401
+ C+ + SIL K+ L P ++ + HF
Sbjct: 314 AERCEGYSGYDISILVKDALMQP-VRRVQSATHF 346
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 176 (67.0 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 59/194 (30%), Positives = 91/194 (46%)
Query: 169 QRLLHYAASAL-MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYP 227
Q L+ Y F + G+ P +R VL +GPPG GKT L KA+A + F
Sbjct: 487 QELVQYPVEHPDKFLKFGMQP-----SRGVLFYGPPGCGKTLLAKAIANECQANF----- 536
Query: 228 QCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAAL 287
+ V L + WF ES V +F K + + DE++S+A AR +
Sbjct: 537 ----ISVKGPELLTMWFGESEANVRDIFDKARSAAP-----CVLFFDELDSIAKARGGNV 587
Query: 288 SGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPT 345
G + RV+N +LT+MD + + NV I+ +N ID A + R D Y+ P
Sbjct: 588 -GDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 646
Query: 346 LQARYEILRSCLQE 359
++R IL++ L++
Sbjct: 647 DKSREAILKANLRK 660
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 171 (65.3 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 49/160 (30%), Positives = 82/160 (51%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 182 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKYIGEGSRMVRELFI 232
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R + SG S+ R + LL Q+D +S+ N+
Sbjct: 233 MAREHAP---SIIFM--DEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIK 287
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
+L +N +D A + R D K P R +IL+
Sbjct: 288 VLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILK 327
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 172 (65.6 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 48/160 (30%), Positives = 84/160 (52%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 181 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 231
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ + + SG + S+ R + LL Q+D +++ N+
Sbjct: 232 MAREHAP---SIIFM--DEIDSIGSRLEGG-SGGD-SEVQRTMLELLNQLDGFEATKNIK 284
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K PP +AR +IL+
Sbjct: 285 VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 324
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 171 (65.3 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 48/160 (30%), Positives = 84/160 (52%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL GPPGTGKT L +A+A + +C + V+ L K+ E ++V +LF
Sbjct: 196 VLLFGPPGTGKTLLARAVAH---------HTECTFIRVSGSELVQKFIGEGARMVRELFV 246
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 247 MAREHAP---SIIFM--DEIDSIGSSRVEGSSGGD-SEVQRTMLELLNQLDGFEATKNIK 300
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K P +AR +IL+
Sbjct: 301 VIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILK 340
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 170 (64.9 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 47/160 (29%), Positives = 84/160 (52%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + +C + V+ L K+ E ++V +LF
Sbjct: 212 VLLYGPPGTGKTLLARAVAH---------HTECTFIRVSGSELVQKFIGEGARMVRELFV 262
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R G + S+ R + LL Q+D +++ N+
Sbjct: 263 MAREHAP---SIIFM--DEIDSIGSSRVEGSRGGD-SEVQRTMLELLNQLDGFEATKNIK 316
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K P +AR +IL+
Sbjct: 317 VIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILK 356
>UNIPROTKB|Q9UN37 [details] [associations]
symbol:VPS4A "Vacuolar protein sorting-associated protein
4A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP;TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0042623 "ATPase activity, coupled" evidence=NAS]
[GO:0000910 "cytokinesis" evidence=IDA] [GO:0030496 "midbody"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000815 "ESCRT III complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] Reactome:REACT_11123 InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0048471 GO:GO:0016192 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 GO:GO:0000910
Pfam:PF04212 eggNOG:COG0464 GO:GO:0030496 EMBL:CH471092
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016044 HOVERGEN:HBG057074
GO:GO:0042623 SMART:SM00745 PDB:2JQ9 PDBsum:2JQ9 PDB:2K3W
PDBsum:2K3W HOGENOM:HOG000225146 EMBL:AF255952 EMBL:AF282903
EMBL:AF132747 EMBL:AF159063 EMBL:AF112215 EMBL:AK315026
EMBL:BC047932 EMBL:AF155740 IPI:IPI00411356 RefSeq:NP_037377.1
UniGene:Hs.128420 PDB:1YXR PDBsum:1YXR ProteinModelPortal:Q9UN37
SMR:Q9UN37 IntAct:Q9UN37 STRING:Q9UN37 PhosphoSite:Q9UN37
DMDM:62511240 PaxDb:Q9UN37 PRIDE:Q9UN37 DNASU:27183
Ensembl:ENST00000254950 GeneID:27183 KEGG:hsa:27183 UCSC:uc002eww.3
CTD:27183 GeneCards:GC16P069335 HGNC:HGNC:13488 HPA:CAB018751
MIM:609982 neXtProt:NX_Q9UN37 PharmGKB:PA38362 InParanoid:Q9UN37
KO:K12196 OMA:FTGKRIP OrthoDB:EOG4G1MGD ChiTaRS:VPS4A
EvolutionaryTrace:Q9UN37 GenomeRNAi:27183 NextBio:50017
ArrayExpress:Q9UN37 Bgee:Q9UN37 CleanEx:HS_VPS4A
Genevestigator:Q9UN37 GermOnline:ENSG00000132612 Uniprot:Q9UN37
Length = 437
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 81/323 (25%), Positives = 138/323 (42%)
Query: 92 ENVQRICVSDTDEWVKNHDILLFWQV--KPVVQVFQLSEEGPCEELSGDG-QLSSFNEWI 148
E+++ CV D K D L + K V+ Q +G + GD + E +
Sbjct: 54 ESIRAKCVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQL 113
Query: 149 LPAKEFDG---MWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGT 205
+ A + W + G K+ L + F W R +LL GPPGT
Sbjct: 114 MGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGK-RTPW-RGILLFGPPGT 171
Query: 206 GKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEE 265
GK+ L KA+A + + +S + V++ L SKW ES KLV LF+ ++ +
Sbjct: 172 GKSYLAKAVATEAN---NSTF-----FSVSSSDLMSKWLGESEKLVKNLFELARQ---HK 220
Query: 266 NNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITA 325
+++F IDEV+SL +R + SE + I+ L+ ++ ++L +NI
Sbjct: 221 PSIIF--IDEVDSLCGSRNE--NESEAARRIKT-EFLVQMQGVGNNNDGTLVLGATNIPW 275
Query: 326 AIDIAFVDRADIKAYVGPPTLQARYEILR----SCLQELIRTGIISNFQDCDQSMLPNFS 381
+D A R + + Y+ P AR ++ R S L I + + + S
Sbjct: 276 VLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADIS 335
Query: 382 IL-KEKLSNPDIQEADRSQHFYK 403
I+ ++ L P +++ + HF K
Sbjct: 336 IIVRDSLMQP-VRKVQSATHFKK 357
>UNIPROTKB|P63345 [details] [associations]
symbol:mpa "Proteasome-associated ATPase" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0010498 "proteasomal protein catabolic process"
evidence=IDA;IMP] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019941 "modification-dependent protein
catabolic process" evidence=IDA;IMP] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0032182 "small conjugating protein binding" evidence=IDA;IPI]
[GO:0043335 "protein unfolding" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0051409 "response to
nitrosative stress" evidence=IMP] [GO:0070628 "proteasome binding"
evidence=IPI] [GO:0071732 "cellular response to nitric oxide"
evidence=IMP] HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0009405 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0051260 EMBL:BX842578 GO:GO:0016887
GO:GO:0071732 GO:GO:0051409 eggNOG:COG0464 EMBL:DQ888314 PIR:F70512
RefSeq:NP_216631.1 RefSeq:NP_336644.1 RefSeq:YP_006515531.1
PDB:3FP9 PDB:3M91 PDB:3M9B PDB:3M9D PDB:3M9H PDBsum:3FP9
PDBsum:3M91 PDBsum:3M9B PDBsum:3M9D PDBsum:3M9H
ProteinModelPortal:P63345 SMR:P63345 DIP:DIP-48292N
MINT:MINT-7262409 PRIDE:P63345 EnsemblBacteria:EBMYCT00000003259
EnsemblBacteria:EBMYCT00000070852 GeneID:13316922 GeneID:887297
GeneID:923659 KEGG:mtc:MT2175 KEGG:mtu:Rv2115c KEGG:mtv:RVBD_2115c
PATRIC:18126540 TubercuList:Rv2115c HOGENOM:HOG000245286 KO:K13527
OMA:VFFDEME ProtClustDB:CLSK872012 UniPathway:UPA00997
EvolutionaryTrace:P63345 GO:GO:0022623 GO:GO:0032182 GO:GO:0019941
GO:GO:0010499 GO:GO:0043335 PANTHER:PTHR23073:SF4
TIGRFAMs:TIGR03689 Uniprot:P63345
Length = 609
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 49/173 (28%), Positives = 85/173 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFS------SRYPQCQLVEVNAHSLFSKWFSESGKL 250
VLL+GPPG GKT + KA+A L+ + + + + + + L +K+ E+ +
Sbjct: 289 VLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERH 348
Query: 251 VAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK 310
+ +FQ+ +E E V V DE++S+ R +S + VV LL+++D ++
Sbjct: 349 IRLIFQRAREKASE-GTPVIVFFDEMDSIFRTRGTGVSSDVETT---VVPQLLSEIDGVE 404
Query: 311 SSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELI 361
NVI++ SN ID A + R D+K + P +A +I L E +
Sbjct: 405 GLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFL 457
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 57/180 (31%), Positives = 83/180 (46%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL GPPG GKT L KA+A + I F + V L + + ES + V FQ
Sbjct: 699 VLLCGPPGCGKTLLAKAIANEAGINF---------ISVKGPELMNMYVGESERAVRACFQ 749
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+ + + DE +SL R G+ + R+VN LLT+MD ++ V
Sbjct: 750 RARNSAP-----CVIFFDEFDSLCPKRSDGGDGN--NSGTRIVNQLLTEMDGVEERKGVY 802
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQ 374
IL +N ID A + R D YVG P R EIL++ + R ++++ D D+
Sbjct: 803 ILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRP-VLADDVDLDE 861
>UNIPROTKB|G3X8E2 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0048471 Pfam:PF04212 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
GeneTree:ENSGT00550000074466 OMA:VRWNDVA EMBL:DAAA02046699
Ensembl:ENSBTAT00000065503 Uniprot:G3X8E2
Length = 437
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 79/323 (24%), Positives = 138/323 (42%)
Query: 92 ENVQRICVSDTDEWVKNHDILLFWQV--KPVVQVFQLSEEGPCEELSGDG-QLSSFNEWI 148
E+++ C+ D K D L + K V+ Q +G + GD + E +
Sbjct: 54 ESIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEGDNPEKKKLQEQL 113
Query: 149 LPAKEFDG---MWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGT 205
+ A + W + G K+ L + F W R +LL GPPGT
Sbjct: 114 MGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGK-RTPW-RGILLFGPPGT 171
Query: 206 GKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEE 265
GK+ L KA+A + + +S + V++ L SKW ES KLV LF+ ++ +
Sbjct: 172 GKSYLAKAVATEAN---NSTF-----FSVSSSDLMSKWLGESEKLVKNLFELARQ---HK 220
Query: 266 NNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITA 325
+++F IDEV+SL +R + SE + I+ L+ ++ ++L +NI
Sbjct: 221 PSIIF--IDEVDSLCGSRNE--NESEAARRIKT-EFLVQMQGVGNNNDGTLVLGATNIPW 275
Query: 326 AIDIAFVDRADIKAYVGPPTLQARYEILR----SCLQELIRTGIISNFQDCDQSMLPNFS 381
+D A R + + Y+ P AR ++ R S L I + + + S
Sbjct: 276 VLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTEANIHELARKTEGYSGADIS 335
Query: 382 IL-KEKLSNPDIQEADRSQHFYK 403
++ ++ L P +++ + HF K
Sbjct: 336 VIVRDSLMQP-VRKVQSATHFKK 357
>UNIPROTKB|I3LL27 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0048471 Pfam:PF04212 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
GeneTree:ENSGT00550000074466 CTD:27183 KO:K12196 OMA:VRWNDVA
EMBL:FP015939 EMBL:FP325157 RefSeq:NP_001230347.1 UniGene:Ssc.15717
Ensembl:ENSSSCT00000026219 GeneID:100627841 KEGG:ssc:100627841
Uniprot:I3LL27
Length = 437
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 80/323 (24%), Positives = 138/323 (42%)
Query: 92 ENVQRICVSDTDEWVKNHDILLFWQV--KPVVQVFQLSEEGPCEELSGDG-QLSSFNEWI 148
E+++ C+ D K D L + K V+ Q +G + GD + E +
Sbjct: 54 ESIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEGDNPEKKKLQEQL 113
Query: 149 LPAKEFDG---MWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGT 205
+ A + W + G K+ L + F W R +LL GPPGT
Sbjct: 114 MGAVVVEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGK-RTPW-RGILLFGPPGT 171
Query: 206 GKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEE 265
GK+ L KA+A + + +S + V++ L SKW ES KLV LF+ ++ +
Sbjct: 172 GKSYLAKAVATEAN---NSTF-----FSVSSSDLMSKWLGESEKLVKNLFELARQ---HK 220
Query: 266 NNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITA 325
+++F IDEV+SL +R + SE + I+ L+ ++ ++L +NI
Sbjct: 221 PSIIF--IDEVDSLCGSRNE--NESEAARRIKT-EFLVQMQGVGNNNDGTLVLGATNIPW 275
Query: 326 AIDIAFVDRADIKAYVGPPTLQARYEILR----SCLQELIRTGIISNFQDCDQSMLPNFS 381
+D A R + + Y+ P AR ++ R S L I + + + S
Sbjct: 276 VLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTEANIHELARKTEGYSGADIS 335
Query: 382 IL-KEKLSNPDIQEADRSQHFYK 403
I+ ++ L P +++ + HF K
Sbjct: 336 IIVRDSLMQP-VRKVQSATHFKK 357
>UNIPROTKB|Q0VD48 [details] [associations]
symbol:VPS4B "Vacuolar protein sorting-associated protein
4B" species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0033993 "response to lipid" evidence=IEA]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA] [GO:0032367 "intracellular
cholesterol transport" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007032 "endosome organization" evidence=IEA]
[GO:0006813 "potassium ion transport" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005774
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0005764
GO:GO:0016887 GO:GO:0032367 GO:GO:0006813 GO:GO:0033993
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
GO:GO:0032510 KO:K12196 OrthoDB:EOG4G1MGD EMBL:BC119836
IPI:IPI00715440 RefSeq:NP_001069624.1 UniGene:Bt.62714
ProteinModelPortal:Q0VD48 SMR:Q0VD48 STRING:Q0VD48 PRIDE:Q0VD48
Ensembl:ENSBTAT00000013862 GeneID:539357 KEGG:bta:539357 CTD:9525
InParanoid:Q0VD48 OMA:AKCAEYL NextBio:20877936 Uniprot:Q0VD48
Length = 444
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 60/216 (27%), Positives = 103/216 (47%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + +++ L SKW ES KLV
Sbjct: 167 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSISSSDLVSKWLGESEKLVK 217
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LFQ + EN + IDE++SL +R + SE + I+ L+ +
Sbjct: 218 NLFQ-----LARENKPSIIFIDEIDSLCGSRSE--NESEAARRIKT-EFLVQMQGVGVDN 269
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDC 372
+++L +NI +D A R + + Y+ P AR + + L + ++F+D
Sbjct: 270 DGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFKLHLGTTQNSLTEADFRDL 329
Query: 373 DQSML----PNFSIL-KEKLSNPDIQEADRSQHFYK 403
+ + SI+ ++ L P +++ + HF K
Sbjct: 330 GKKTEGYSGADISIIVRDALMQP-VRKVQSATHFKK 364
>POMBASE|SPBC947.01 [details] [associations]
symbol:alf1 "ATP-dependent microtubule severing protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISM] [GO:0032153 "cell
division site" evidence=IDA] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051286 "cell tip" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC947.01
GO:GO:0005524 GO:GO:0005634 GO:GO:0032153 GO:GO:0051286
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG0464 PIR:T40781
RefSeq:NP_595275.1 HSSP:O75351 ProteinModelPortal:O43078 SMR:O43078
EnsemblFungi:SPBC947.01.1 GeneID:2541249 KEGG:spo:SPBC947.01
OrthoDB:EOG44TSHD NextBio:20802361 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 Uniprot:O43078
Length = 660
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/174 (31%), Positives = 83/174 (47%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL GPPGTGKT L +A+A + F S ++A SL SK+ +S KLV LF+
Sbjct: 415 MLLFGPPGTGKTMLARAVATEAKATFFS---------ISASSLTSKYLGDSEKLVRALFE 465
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKS----- 311
V + + +DE++S+ +AR SG+E S R+ L Q L +
Sbjct: 466 -----VAKRQTCSVIFVDEIDSILSARND--SGNEHESSRRLKTEFLIQWSSLTNAAPDK 518
Query: 312 ----SPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELI 361
SP V++L +N+ ID A R + Y+ P + RY+ L L +
Sbjct: 519 QTGHSPRVLVLAATNLPWCIDEAARRRFVKRTYIPLPEKETRYKHLSHLLHNQV 572
>UNIPROTKB|E2RA71 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 Pfam:PF04212 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 SMART:SM00745 GeneTree:ENSGT00550000074466 OMA:FTGKRIP
EMBL:AAEX03004108 Ensembl:ENSCAFT00000032306 NextBio:20854819
Uniprot:E2RA71
Length = 437
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 80/323 (24%), Positives = 138/323 (42%)
Query: 92 ENVQRICVSDTDEWVKNHDILLFWQV--KPVVQVFQLSEEGPCEELSGDG-QLSSFNEWI 148
E+++ C+ D K D L + K V+ Q +G + GD + E +
Sbjct: 54 ESIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEGDNPEKKKLQEQL 113
Query: 149 LPAKEFDG---MWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGT 205
+ A + W + G K+ L + F W R +LL GPPGT
Sbjct: 114 MGAVVIEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGK-RTPW-RGILLFGPPGT 171
Query: 206 GKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEE 265
GK+ L KA+A + + +S + V++ L SKW ES KLV LF+ ++ +
Sbjct: 172 GKSYLAKAVATEAN---NSTF-----FSVSSSDLMSKWLGESEKLVKNLFELARQ---HK 220
Query: 266 NNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITA 325
+++F IDEV+SL +R + SE + I+ L+ ++ ++L +NI
Sbjct: 221 PSIIF--IDEVDSLCGSRNE--NESEAARRIKT-EFLVQMQGVGNNNDGTLVLGATNIPW 275
Query: 326 AIDIAFVDRADIKAYVGPPTLQARYEILR----SCLQELIRTGIISNFQDCDQSMLPNFS 381
+D A R + + Y+ P AR ++ R S L I + + + S
Sbjct: 276 VLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADIS 335
Query: 382 IL-KEKLSNPDIQEADRSQHFYK 403
I+ ++ L P +++ + HF K
Sbjct: 336 IIVRDSLMQP-VRKVQSATHFKK 357
>UNIPROTKB|O50202 [details] [associations]
symbol:arc "Proteasome-associated ATPase" species:1833
"Rhodococcus erythropolis" [GO:0000502 "proteasome complex"
evidence=IGC] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGC] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0022623 "proteasome-activating nucleotidase complex"
evidence=IGC] [GO:0043273 "CTPase activity" evidence=IDA]
HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 GO:GO:0010498
UniPathway:UPA00997 GO:GO:0022623 GO:GO:0019941
PANTHER:PTHR23073:SF4 TIGRFAMs:TIGR03689 EMBL:AF088800 PDB:2WFW
PDBsum:2WFW ProteinModelPortal:O50202 EvolutionaryTrace:O50202
GO:GO:0043273 Uniprot:O50202
Length = 591
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 48/169 (28%), Positives = 85/169 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFS------SRYPQCQLVEVNAHSLFSKWFSESGKL 250
VLL+GPPG GKT + KA+A L+ + + S+ + + + L +K+ E+ +
Sbjct: 271 VLLYGPPGCGKTLIAKAVANSLAKKIAEARGQDSKDAKSYFLNIKGPELLNKFVGETERH 330
Query: 251 VAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK 310
+ +FQ+ +E E V V DE++S+ R + +S + VV LL+++D ++
Sbjct: 331 IRMIFQRAREKASE-GTPVIVFFDEMDSIFRTRGSGVSSDVETT---VVPQLLSEIDGVE 386
Query: 311 SSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCL 357
NVI++ SN ID A + R D+K + P ++ +I L
Sbjct: 387 GLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAESAQDIFSKYL 435
>UNIPROTKB|F1PVE5 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 Pfam:PF04212 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 SMART:SM00745 GeneTree:ENSGT00550000074466 KO:K12196
CTD:9525 OMA:AKCAEYL EMBL:AAEX03000082 RefSeq:XP_848812.1
Ensembl:ENSCAFT00000000116 GeneID:607306 KEGG:cfa:607306
Uniprot:F1PVE5
Length = 444
Score = 166 (63.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 61/216 (28%), Positives = 100/216 (46%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + +++ L SKW ES KLV
Sbjct: 167 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSISSSDLVSKWLGESEKLVK 217
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LFQ + EN + IDE++SL +R + SE + I+ L+ +
Sbjct: 218 NLFQ-----LARENKPSIIFIDEIDSLCGSRSE--NESEAARRIKT-EFLVQMQGVGVDN 269
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCL----QELIRTGIISN 368
+++L +NI +D A R + + Y+ P AR + + L L T
Sbjct: 270 DGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFKLHLGTTQNSLAETDFREL 329
Query: 369 FQDCDQSMLPNFSIL-KEKLSNPDIQEADRSQHFYK 403
+ D + SI+ ++ L P +++ + HF K
Sbjct: 330 GKKTDGYSGADISIIVRDALMQP-VRKVQSATHFKK 364
>UNIPROTKB|I3LEM5 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074466
OMA:KINQQRP Ensembl:ENSSSCT00000029670 Uniprot:I3LEM5
Length = 355
Score = 164 (62.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 51/167 (30%), Positives = 80/167 (47%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 204 WNDIIGLDAAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 261
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 262 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 307
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNI 323
S+ + R A G E S+R+ LL QMD L S +++ +L SN+
Sbjct: 308 SVMSHRGTA-PGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNL 353
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 42/159 (26%), Positives = 82/159 (51%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LLHGP G GK+ + KA+A ++SI F + + ++SKW ES +++ LF+
Sbjct: 523 LLLHGPSGCGKSLMVKAIATEMSINF---------ISIKGSDIYSKWLGESERIIRDLFK 573
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+ ++ + DE++SL +R + + S R+++ LL +MD ++ +
Sbjct: 574 SARL-----SSPCIMFFDEIDSLTLSRGSGDDNEDGGTSKRILSQLLNEMDGIQVKSQIF 628
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
++ +N +ID A + R + ++ P+L R +IL
Sbjct: 629 LIGCTNSIQSIDSALLRPGRFESLIHIDLPSLDDRLDIL 667
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 172 (65.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 60/187 (32%), Positives = 91/187 (48%)
Query: 170 RLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQC 229
+L A L++ E N F ++ R VL HGPPGTGKT + +ALA S +S
Sbjct: 411 QLKEMVALPLLYPELYQN-FAITPPRGVLFHGPPGTGKTLMARALAASCS---TSERKIT 466
Query: 230 QLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSG 289
+ A L SKW E+ + + LF+ E ++ +++F DE++ LA R S
Sbjct: 467 FFMRKGADCL-SKWVGEAERQLRLLFE---EAKNQQPSIIF--FDEIDGLAPVR----SS 516
Query: 290 SEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQ 347
+ +V+ LL MD + + VI++ +N AID A R D + Y P L
Sbjct: 517 KQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAIDPALRRPGRFDREFYFPLPDLG 576
Query: 348 ARYEILR 354
+R EIL+
Sbjct: 577 SRKEILK 583
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 47/172 (27%), Positives = 86/172 (50%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
++++ G++P R VLL+GPPGTGKT L KA+A + F + +N
Sbjct: 180 LYSQIGIDP-----PRGVLLYGPPGTGKTMLVKAVANSTTASF---------IRINGSEF 225
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
K+ E ++V +F+ + EN+ + IDE++++A R A +G++ + R++
Sbjct: 226 VQKYLGEGPRMVRDVFR-----LARENSPAIIFIDEIDAIATKRFDAQTGAD-REVQRIL 279
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYE 351
LL QMD + V ++ +N +D A + + + P+L+ R E
Sbjct: 280 LELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDRRE 331
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 47/172 (27%), Positives = 86/172 (50%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
++++ G++P R VLL+GPPGTGKT L KA+A + F + +N
Sbjct: 180 LYSQIGIDP-----PRGVLLYGPPGTGKTMLVKAVANSTTASF---------IRINGSEF 225
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
K+ E ++V +F+ + EN+ + IDE++++A R A +G++ + R++
Sbjct: 226 VQKYLGEGPRMVRDVFR-----LARENSPAIIFIDEIDAIATKRFDAQTGAD-REVQRIL 279
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYE 351
LL QMD + V ++ +N +D A + + + P+L+ R E
Sbjct: 280 LELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDRRE 331
>MGI|MGI:1890520 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4a (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017048 "Rho GTPase binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO;IDA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1890520 GO:GO:0005524 GO:GO:0048471
GO:GO:0051301 GO:GO:0016192 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AF530161 EMBL:AK047821
EMBL:AK159117 EMBL:BC018368 IPI:IPI00312172 RefSeq:NP_569053.1
UniGene:Mm.236004 ProteinModelPortal:Q8VEJ9 SMR:Q8VEJ9
STRING:Q8VEJ9 PhosphoSite:Q8VEJ9 PaxDb:Q8VEJ9 PRIDE:Q8VEJ9
Ensembl:ENSMUST00000034388 GeneID:116733 KEGG:mmu:116733
UCSC:uc009ngv.1 InParanoid:Q8VEJ9 OMA:VRWNDVA NextBio:369058
Bgee:Q8VEJ9 CleanEx:MM_VPS4A Genevestigator:Q8VEJ9
GermOnline:ENSMUSG00000031913 Uniprot:Q8VEJ9
Length = 437
Score = 165 (63.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 80/323 (24%), Positives = 138/323 (42%)
Query: 92 ENVQRICVSDTDEWVKNHDILLFWQV--KPVVQVFQLSEEGPCEELSGDG-QLSSFNEWI 148
E+++ C+ D K D L + K V+ Q +G + GD + E +
Sbjct: 54 ESIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQL 113
Query: 149 LPAKEFDG---MWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGT 205
+ A + W + G K+ L + F W R +LL GPPGT
Sbjct: 114 MGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGK-RTPW-RGILLFGPPGT 171
Query: 206 GKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEE 265
GK+ L KA+A + + +S + V++ L SKW ES KLV LF+ ++ +
Sbjct: 172 GKSYLAKAVATEAN---NSTF-----FSVSSSDLMSKWLGESEKLVKNLFELARQ---HK 220
Query: 266 NNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITA 325
+++F IDEV+SL +R + SE + I+ L+ ++ ++L +NI
Sbjct: 221 PSIIF--IDEVDSLCGSRNE--NESEAARRIKT-EFLVQMQGVGNNNDGTLVLGATNIPW 275
Query: 326 AIDIAFVDRADIKAYVGPPTLQARYEILR----SCLQELIRTGIISNFQDCDQSMLPNFS 381
+D A R + + Y+ P AR ++ R S L I + + + S
Sbjct: 276 VLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADIS 335
Query: 382 IL-KEKLSNPDIQEADRSQHFYK 403
I+ ++ L P +++ + HF K
Sbjct: 336 IIVRDSLMQP-VRKVQSATHFKK 357
>RGD|628810 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4 homolog A (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000910
"cytokinesis" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016197 "endosomal transport" evidence=IC;ISO]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0000815 "ESCRT III complex" evidence=ISO] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:628810 GO:GO:0005524
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 165 (63.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 80/323 (24%), Positives = 138/323 (42%)
Query: 92 ENVQRICVSDTDEWVKNHDILLFWQV--KPVVQVFQLSEEGPCEELSGDG-QLSSFNEWI 148
E+++ C+ D K D L + K V+ Q +G + GD + E +
Sbjct: 54 ESIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQL 113
Query: 149 LPAKEFDG---MWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGT 205
+ A + W + G K+ L + F W R +LL GPPGT
Sbjct: 114 MGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGK-RTPW-RGILLFGPPGT 171
Query: 206 GKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEE 265
GK+ L KA+A + + +S + V++ L SKW ES KLV LF+ ++ +
Sbjct: 172 GKSYLAKAVATEAN---NSTF-----FSVSSSDLMSKWLGESEKLVKNLFELARQ---HK 220
Query: 266 NNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITA 325
+++F IDEV+SL +R + SE + I+ L+ ++ ++L +NI
Sbjct: 221 PSIIF--IDEVDSLCGSRNE--NESEAARRIKT-EFLVQMQGVGNNNDGTLVLGATNIPW 275
Query: 326 AIDIAFVDRADIKAYVGPPTLQARYEILR----SCLQELIRTGIISNFQDCDQSMLPNFS 381
+D A R + + Y+ P AR ++ R S L I + + + S
Sbjct: 276 VLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADIS 335
Query: 382 IL-KEKLSNPDIQEADRSQHFYK 403
I+ ++ L P +++ + HF K
Sbjct: 336 IIVRDSLMQP-VRKVQSATHFKK 357
>UNIPROTKB|Q793F9 [details] [associations]
symbol:Vps4a "Vacuolar protein sorting-associated protein
4A" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:628810 GO:GO:0005524 GO:GO:0051301 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0017111 HSSP:O75351 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 CTD:27183
KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 165 (63.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 80/323 (24%), Positives = 138/323 (42%)
Query: 92 ENVQRICVSDTDEWVKNHDILLFWQV--KPVVQVFQLSEEGPCEELSGDG-QLSSFNEWI 148
E+++ C+ D K D L + K V+ Q +G + GD + E +
Sbjct: 54 ESIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQL 113
Query: 149 LPAKEFDG---MWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGT 205
+ A + W + G K+ L + F W R +LL GPPGT
Sbjct: 114 MGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGK-RTPW-RGILLFGPPGT 171
Query: 206 GKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEE 265
GK+ L KA+A + + +S + V++ L SKW ES KLV LF+ ++ +
Sbjct: 172 GKSYLAKAVATEAN---NSTF-----FSVSSSDLMSKWLGESEKLVKNLFELARQ---HK 220
Query: 266 NNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITA 325
+++F IDEV+SL +R + SE + I+ L+ ++ ++L +NI
Sbjct: 221 PSIIF--IDEVDSLCGSRNE--NESEAARRIKT-EFLVQMQGVGNNNDGTLVLGATNIPW 275
Query: 326 AIDIAFVDRADIKAYVGPPTLQARYEILR----SCLQELIRTGIISNFQDCDQSMLPNFS 381
+D A R + + Y+ P AR ++ R S L I + + + S
Sbjct: 276 VLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADIS 335
Query: 382 IL-KEKLSNPDIQEADRSQHFYK 403
I+ ++ L P +++ + HF K
Sbjct: 336 IIVRDSLMQP-VRKVQSATHFKK 357
>WB|WBGene00003818 [details] [associations]
symbol:nsf-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0071688 "striated muscle
myosin thick filament assembly" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0002119 GO:GO:0032940 GO:GO:0046872
GO:GO:0015031 GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 169 (64.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 66/243 (27%), Positives = 111/243 (45%)
Query: 121 VQVFQLSEEGPCEELSGDGQ-LSSFNEWILPAKEFDGMWESLIYESGLKQRLLHY---AA 176
V VF EEG L G + S++ I P +F M GL H A
Sbjct: 259 VIVFD-KEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIG-----GLDTEFSHIFRRAF 312
Query: 177 SALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNA 236
++ +F + + + R +LL GPPGTGKT + + + + L+ +R P+ VN
Sbjct: 313 ASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLN----AREPKI----VNG 364
Query: 237 HSLFSKWFSESGKLVAKLFQKIQEMVEE---ENNLVFVLIDEVESLAAARKAALSGSEPS 293
+ K+ ES V KLF +E + L ++ DE++++ R + S
Sbjct: 365 PQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVH 424
Query: 294 DSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYE 351
D+ VVN LL++MD ++ N++++ +N ID A + R +++ V P R +
Sbjct: 425 DT--VVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQ 482
Query: 352 ILR 354
IL+
Sbjct: 483 ILK 485
>UNIPROTKB|Q94392 [details] [associations]
symbol:nsf-1 "Vesicle-fusing ATPase" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0009792
GO:GO:0006898 GO:GO:0005737 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0032940 GO:GO:0046872 GO:GO:0015031
GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 169 (64.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 66/243 (27%), Positives = 111/243 (45%)
Query: 121 VQVFQLSEEGPCEELSGDGQ-LSSFNEWILPAKEFDGMWESLIYESGLKQRLLHY---AA 176
V VF EEG L G + S++ I P +F M GL H A
Sbjct: 259 VIVFD-KEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIG-----GLDTEFSHIFRRAF 312
Query: 177 SALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNA 236
++ +F + + + R +LL GPPGTGKT + + + + L+ +R P+ VN
Sbjct: 313 ASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLN----AREPKI----VNG 364
Query: 237 HSLFSKWFSESGKLVAKLFQKIQEMVEE---ENNLVFVLIDEVESLAAARKAALSGSEPS 293
+ K+ ES V KLF +E + L ++ DE++++ R + S
Sbjct: 365 PQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVH 424
Query: 294 DSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYE 351
D+ VVN LL++MD ++ N++++ +N ID A + R +++ V P R +
Sbjct: 425 DT--VVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQ 482
Query: 352 ILR 354
IL+
Sbjct: 483 ILK 485
>TAIR|locus:2168646 [details] [associations]
symbol:AT5G53540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
HOGENOM:HOG000225141 EMBL:AB015476 OMA:VINPLHI EMBL:AY058857
EMBL:BT002644 IPI:IPI00537305 RefSeq:NP_200166.1 UniGene:At.26650
ProteinModelPortal:Q9FJC9 SMR:Q9FJC9 PRIDE:Q9FJC9
EnsemblPlants:AT5G53540.1 GeneID:835436 KEGG:ath:AT5G53540
TAIR:At5g53540 InParanoid:Q9FJC9 PhylomeDB:Q9FJC9
ProtClustDB:CLSN2685508 Genevestigator:Q9FJC9 Uniprot:Q9FJC9
Length = 403
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 50/170 (29%), Positives = 86/170 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L KA+A++ F + V +L SKWF ++ KLV+ +F
Sbjct: 125 VLLYGPPGTGKTMLAKAIARESEAVF---------INVKVSNLMSKWFGDAQKLVSAVFS 175
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
++ + ++F IDEV+S R++ + +E +++ L + V+
Sbjct: 176 LAYKL---QPAIIF--IDEVDSFLGQRRS--TDNEAMSNMKTEFMALWDGFTTDQNARVM 228
Query: 317 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ-ELIRTGI 365
+L +N + +D A + R +G P Q R +IL+ L+ E + + I
Sbjct: 229 VLAATNRPSELDEAILRRFPQSFEIGMPDCQERAQILKVVLKGESVESDI 278
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 169 (64.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG KT + KALA + + F + + L +K+ ES + V ++F+
Sbjct: 664 VLLYGPPGCSKTMIAKALANESGLNF---------LAIKGPELMNKYVGESERAVREIFR 714
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K + + +++F DE+++LA R ++ +D RV+ LLT+MD ++ NV
Sbjct: 715 KARAVAP---SIIF--FDELDALAVERGSSSGAGNVAD--RVLAQLLTEMDGIEQLKNVT 767
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
+L +N ID A + R D YV P R EIL
Sbjct: 768 VLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIL 806
Score = 139 (54.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 48/168 (28%), Positives = 82/168 (48%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R +LL+GPPGTGKT + +A+A ++ S +N + SK++ E+ A+L
Sbjct: 388 RGLLLYGPPGTGKTMIARAVANEVGAYVSV---------INGPEIISKFYGETE---ARL 435
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
Q E +++F IDE+++L R+ A S E + + L+ + S
Sbjct: 436 RQIFAEATLRHPSIIF--IDELDALCPKREGAQSEVEKR-VVASLLTLMDGIGSEGSEGR 492
Query: 315 VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILRSCLQEL 360
V++L +N A+D A R D + +G P Q R +IL+ L+ +
Sbjct: 493 VLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRV 540
>UNIPROTKB|F1M2L9 [details] [associations]
symbol:Katnal2 "Protein Katnal2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
RGD:1564708 GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513
GO:GO:0017111 GeneTree:ENSGT00550000074466 IPI:IPI00763458
Ensembl:ENSRNOT00000023967 Uniprot:F1M2L9
Length = 392
Score = 163 (62.4 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 50/167 (29%), Positives = 80/167 (47%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W +I KQ + + + + L W + LL+GPPGTGKT L KA+A +
Sbjct: 237 WNDIIGLDAAKQLVKEAVVYPIRYPQLFTG-ILSPWKGL-LLYGPPGTGKTLLAKAVATE 294
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
F + ++A ++ SKW +S KLV LF+ + + +DE+E
Sbjct: 295 CKTTFFN---------ISASTIVSKWRGDSEKLVRVLFELARYHAPST-----IFLDELE 340
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI-ILTTSNI 323
S+ + R + G E S+R+ LL QMD L S +++ +L SN+
Sbjct: 341 SVMSQR-GMVPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNL 386
>UNIPROTKB|G4MRG5 [details] [associations]
symbol:MGG_02418 "Vesicular-fusion protein SEC18"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 KO:K06027 RefSeq:XP_003709204.1
ProteinModelPortal:G4MRG5 EnsemblFungi:MGG_02418T0 GeneID:2681515
KEGG:mgr:MGG_02418 Uniprot:G4MRG5
Length = 835
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 50/193 (25%), Positives = 100/193 (51%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL GPPGTGKT + + + + L+ +R P+ +N + +K+ +S + + K+F
Sbjct: 345 ILLFGPPGTGKTLIARQIGKMLN----AREPKI----INGPEVLNKYVGQSEENIRKMFA 396
Query: 257 KIQ-EMVE--EENNLVFVLIDEVESLAAARKAALSGSEP-SDSIRVVNALLTQMDKLKSS 312
+ E E +E+ L ++ DE++++ R + G DS VVN LL+++D +
Sbjct: 397 DAEKEYAEKGDESGLHIIIFDELDAVCKQRGSGSGGGTGVGDS--VVNQLLSKLDGVNQL 454
Query: 313 PNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQ 370
N++++ +N ID A + R +++ + P R +IL+ ++++ +I +
Sbjct: 455 NNILLIGMTNRKDMIDDALLRPGRLEVQVEISLPDEPGREKILQIHTTKMVKNNVIESDV 514
Query: 371 DCDQ--SMLPNFS 381
D + +M NFS
Sbjct: 515 DLRELAAMTKNFS 527
>FB|FBgn0013998 [details] [associations]
symbol:Nsf2 "NEM-sensitive fusion protein 2" species:7227
"Drosophila melanogaster" [GO:0005737 "cytoplasm" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0016082
"synaptic vesicle priming" evidence=NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS;NAS] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=NAS] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0031201
"SNARE complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0015031 GO:GO:0007274
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0008582 GO:GO:0016082 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OrthoDB:EOG4RFJ7K
EMBL:U30502 EMBL:BT023784 EMBL:U28836 RefSeq:NP_788676.1
UniGene:Dm.6688 ProteinModelPortal:P54351 SMR:P54351
MINT:MINT-1669916 STRING:P54351 PaxDb:P54351 PRIDE:P54351
EnsemblMetazoa:FBtr0082883 GeneID:41694 KEGG:dme:Dmel_CG33101
CTD:41694 FlyBase:FBgn0013998 InParanoid:P54351 OMA:IFTLRTH
PhylomeDB:P54351 GenomeRNAi:41694 NextBio:825088 Bgee:P54351
GermOnline:CG33101 Uniprot:P54351
Length = 752
Score = 167 (63.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 45/162 (27%), Positives = 85/162 (52%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL+GPPGTGKT +A+++ ++R P+ VN + K+ ES + +LF
Sbjct: 261 ILLYGPPGTGKT----LMARQIGTMLNAREPKI----VNGPQILDKYVGESEANIRRLFA 312
Query: 257 KIQEMVEE---ENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
+ +E + + L ++ DE++++ AR + S D+ VVN LL ++D ++
Sbjct: 313 EAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDT--VVNQLLAKIDGVEQLN 370
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R +++ + P Q R +IL
Sbjct: 371 NILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQIL 412
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 170 (64.9 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 57/187 (30%), Positives = 92/187 (49%)
Query: 170 RLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQC 229
+L A L++ E N F ++ R VL HGPPGTGKT + +ALA S S
Sbjct: 424 QLKEMVALPLLYPELYQN-FNITPPRGVLFHGPPGTGKTLMARALAASCS---SDERKIT 479
Query: 230 QLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSG 289
+ A + SKW E+ + + LF+ E + + +++F DE++ LA R S
Sbjct: 480 FFMRKGA-DILSKWVGEAERQLRLLFE---EAKKHQPSIIF--FDEIDGLAPVR----SS 529
Query: 290 SEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQ 347
+ +V+ LL MD + + VI++ +N A+D A R D + Y P ++
Sbjct: 530 KQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVK 589
Query: 348 ARYEILR 354
AR++IL+
Sbjct: 590 ARFKILQ 596
>UNIPROTKB|O75351 [details] [associations]
symbol:VPS4B "Vacuolar protein sorting-associated protein
4B" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006813 "potassium
ion transport" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA;IMP] [GO:0005764
"lysosome" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0016197 "endosomal
transport" evidence=IDA;IMP;TAS] [GO:0006200 "ATP catabolic
process" evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032510 "endosome
to lysosome transport via multivesicular body sorting pathway"
evidence=IMP] [GO:0033993 "response to lipid" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042623 "ATPase activity,
coupled" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0032367 "intracellular cholesterol transport" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0016044 "cellular membrane
organization" evidence=TAS] Reactome:REACT_11123 InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005774 GO:GO:0051301
GO:GO:0031902 GO:GO:0015031 GO:GO:0005764 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 GO:GO:0016044
HOVERGEN:HBG057074 GO:GO:0042623 EMBL:CH471096 SMART:SM00745
PDB:2JQK PDBsum:2JQK HOGENOM:HOG000225146 GO:GO:0032510 KO:K12196
OrthoDB:EOG4G1MGD CTD:9525 OMA:AKCAEYL EMBL:AF195514 EMBL:AF282904
EMBL:AF038960 EMBL:AY232629 EMBL:BC039574 IPI:IPI00182728
RefSeq:NP_004860.2 UniGene:Hs.126550 PDB:1WR0 PDB:1XWI PDB:2CPT
PDB:2JQH PDBsum:1WR0 PDBsum:1XWI PDBsum:2CPT PDBsum:2JQH
ProteinModelPortal:O75351 SMR:O75351 IntAct:O75351 STRING:O75351
PhosphoSite:O75351 PaxDb:O75351 PeptideAtlas:O75351 PRIDE:O75351
DNASU:9525 Ensembl:ENST00000238497 GeneID:9525 KEGG:hsa:9525
UCSC:uc002lix.3 GeneCards:GC18M061056 HGNC:HGNC:10895 HPA:CAB046445
MIM:609983 neXtProt:NX_O75351 PharmGKB:PA35795 InParanoid:O75351
PhylomeDB:O75351 EvolutionaryTrace:O75351 GenomeRNAi:9525
NextBio:35700 Bgee:O75351 CleanEx:HS_VPS4B Genevestigator:O75351
GermOnline:ENSG00000119541 Uniprot:O75351
Length = 444
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 60/216 (27%), Positives = 103/216 (47%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + +++ L SKW ES KLV
Sbjct: 167 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSISSSDLVSKWLGESEKLVK 217
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LFQ + EN + IDE++SL +R + SE + I+ L+ +
Sbjct: 218 NLFQ-----LARENKPSIIFIDEIDSLCGSRSE--NESEAARRIKT-EFLVQMQGVGVDN 269
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDC 372
+++L +NI +D A R + + Y+ P AR + + L + ++F++
Sbjct: 270 DGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFREL 329
Query: 373 ----DQSMLPNFSIL-KEKLSNPDIQEADRSQHFYK 403
D + SI+ ++ L P +++ + HF K
Sbjct: 330 GRKTDGYSGADISIIVRDALMQP-VRKVQSATHFKK 364
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 162 (62.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 51/183 (27%), Positives = 89/183 (48%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
++ + G++P R VLL+GPPGTGKT L KA+A + F + V
Sbjct: 180 LYKQIGIDP-----PRGVLLYGPPGTGKTMLAKAVANHTTAAF---------IRVVGSEF 225
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
K+ E ++V +F+ + +EN + IDEV+++A AR A +G++ + R++
Sbjct: 226 VQKYLGEGPRMVRDVFR-----LAKENAPAIIFIDEVDAIATARFDAQTGAD-REVQRIL 279
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCL 357
LL QMD + NV ++ +N +D A + R D K P + + + + C
Sbjct: 280 MELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCT 339
Query: 358 QEL 360
++
Sbjct: 340 SKM 342
>FB|FBgn0000346 [details] [associations]
symbol:comt "comatose" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=ISS;NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=NAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016082 "synaptic
vesicle priming" evidence=NAS] [GO:0007030 "Golgi organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0048172 "regulation of
short-term neuronal synaptic plasticity" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0006911
GO:GO:0046872 GO:GO:0015031 EMBL:AE014298 GO:GO:0016887
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0007030 GO:GO:0048172 GO:GO:0016082 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 CTD:1312 EMBL:U09373
EMBL:BT010259 RefSeq:NP_524877.1 UniGene:Dm.1772
ProteinModelPortal:P46461 SMR:P46461 DIP:DIP-20666N IntAct:P46461
MINT:MINT-288692 STRING:P46461 PaxDb:P46461 PRIDE:P46461
EnsemblMetazoa:FBtr0073754 EnsemblMetazoa:FBtr0333329 GeneID:47091
KEGG:dme:Dmel_CG1618 FlyBase:FBgn0000346
GeneTree:ENSGT00530000064085 InParanoid:P46461 KO:K06027
OMA:HFIFALE OrthoDB:EOG4RFJ7K PhylomeDB:P46461 GenomeRNAi:47091
NextBio:838904 Bgee:P46461 GermOnline:CG1618 Uniprot:P46461
Length = 745
Score = 166 (63.5 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 46/162 (28%), Positives = 84/162 (51%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL+GPPGTGKT +A+++ ++R P+ VN + K+ ES V +LF
Sbjct: 256 ILLYGPPGTGKT----LMARQIGTMLNAREPKI----VNGPQILDKYVGESEANVRRLFA 307
Query: 257 KIQEMVEE---ENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
+ +E + + L ++ DE++++ R + S D+ VVN LLT++D +
Sbjct: 308 EAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDT--VVNQLLTKIDGVDQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R +++ + P Q R +IL
Sbjct: 366 NILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQIL 407
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 162 (62.1 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 51/160 (31%), Positives = 81/160 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
V+L+GPPGTGKT L KA+A + S F + V L K+ + KLV ++F
Sbjct: 230 VILYGPPGTGKTLLAKAVANETSATF---------LRVVGSELIQKYLGDGPKLVREMF- 279
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K+ E E ++VF IDE++++ R A SG E + R + LL Q+D S +V
Sbjct: 280 KVAE--EHAPSIVF--IDEIDAVGTKRYEATSGGE-REIQRTMLELLNQLDGFDSRGDVK 334
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N ++D A + R D K + P + + I +
Sbjct: 335 VIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQ 374
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 162 (62.1 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 51/160 (31%), Positives = 81/160 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
V+L+GPPGTGKT L KA+A + S F + V L K+ + KLV ++F
Sbjct: 230 VILYGPPGTGKTLLAKAVANETSATF---------LRVVGSELIQKYLGDGPKLVREMF- 279
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K+ E E ++VF IDE++++ R A SG E + R + LL Q+D S +V
Sbjct: 280 KVAE--EHAPSIVF--IDEIDAVGTKRYEATSGGE-REIQRTMLELLNQLDGFDSRGDVK 334
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N ++D A + R D K + P + + I +
Sbjct: 335 VIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQ 374
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 166 (63.5 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 51/160 (31%), Positives = 81/160 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG KT + KALA + + F + + L +K+ ES + V + F+
Sbjct: 664 VLLYGPPGCSKTMIAKALANESGLNF---------LAIKGPELMNKYVGESERAVRETFR 714
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K + + +++F DE+++LA R ++L +D RV+ LLT+MD ++ +V
Sbjct: 715 KARAVAP---SIIF--FDELDALAVERGSSLGAGNVAD--RVLAQLLTEMDGIEQLKDVT 767
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
IL +N ID A + R D YV P R EI +
Sbjct: 768 ILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFK 807
Score = 142 (55.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 49/168 (29%), Positives = 82/168 (48%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VLL+GPPGTGKT + +A+A ++ S +N + SK++ E+ AKL
Sbjct: 388 RGVLLYGPPGTGKTMIARAVANEVGAYVSV---------INGPEIISKFYGETE---AKL 435
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
Q E +++F IDE+++L R+ A + E + + L+ + S
Sbjct: 436 RQIFAEATLRHPSIIF--IDELDALCPKREGAQNEVEKR-VVASLLTLMDGIGSEVSEGQ 492
Query: 315 VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILRSCLQEL 360
V++L +N A+D A R D + +G P Q R +IL+ L+ +
Sbjct: 493 VLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRV 540
>FB|FBgn0005322 [details] [associations]
symbol:nmd "no mitochondrial derivative" species:7227
"Drosophila melanogaster" [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0007286 "spermatid development" evidence=TAS] [GO:0005741
"mitochondrial outer membrane" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IGI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0048190 EMBL:AE014134
GO:GO:0005741 GO:GO:0007286 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 GeneTree:ENSGT00550000074823 EMBL:AY119493
RefSeq:NP_609373.1 UniGene:Dm.11450 SMR:Q9VL02 IntAct:Q9VL02
MINT:MINT-282656 STRING:Q9VL02 EnsemblMetazoa:FBtr0080065
GeneID:44021 KEGG:dme:Dmel_CG5395 UCSC:CG5395-RA CTD:44021
FlyBase:FBgn0005322 InParanoid:Q9VL02 OMA:EMCRNAS OrthoDB:EOG4PG4GP
GenomeRNAi:44021 NextBio:836621 Uniprot:Q9VL02
Length = 369
Score = 160 (61.4 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLLHGPPG GKT + KA A++ +RF + ++ L KW+ ES KL + +F
Sbjct: 135 VLLHGPPGCGKTLIAKATAKEAGMRF---------INLDVAILTDKWYGESQKLTSAVFS 185
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+ E ++F IDE++S +R ++ E + ++ +L ++ VI
Sbjct: 186 LASRI---EPCIIF--IDEIDSFLRSRN--MNDHEATAMMKTQFMMLWDGLSTNANSTVI 238
Query: 317 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
++ +N +D A V R + ++G P+ R +IL+ LQ
Sbjct: 239 VMGATNRPQDLDKAIVRRMPAQFHIGLPSETQRKDILKLILQ 280
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 165 (63.1 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 55/186 (29%), Positives = 86/186 (46%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPG GKT L KA+A + + F + + VEV V LF++
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGP-EFVEVIG--------GLGAARVRSLFKE 396
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
+ V IDE++++ R A+SG ++ + +N LL +MD + ++ +VI+
Sbjct: 397 ARARAP-----CIVYIDEIDAVGKKRSTAVSGFSNTEEEQTLNQLLVEMDGMGTTDHVIV 451
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQS 375
L +N +D A + R D ++ PTLQ R EI L+ L T S +
Sbjct: 452 LAATNRADILDNALLRPGRLDRHVFIDLPTLQERKEIFEQHLKSLKLTRASSFYSQRLAE 511
Query: 376 MLPNFS 381
+ P FS
Sbjct: 512 LTPGFS 517
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 161 (61.7 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 55/177 (31%), Positives = 90/177 (50%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
+F + G+ P + +LL+GPPGTGKT L KA+A + + F + V L
Sbjct: 195 LFEKVGIEP-----PKGILLYGPPGTGKTLLAKAVATETNATF---------IRVVGSEL 240
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
K+ E LV +F K+ + E+ +++F IDE++++AA R AL+G + + R +
Sbjct: 241 VKKFIGEGASLVKDIF-KLAK--EKAPSIIF--IDEIDAIAAKRTDALTGGD-REVQRTL 294
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
LL +MD + +V I+ +N +D A + R D V P + R EIL+
Sbjct: 295 MQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILK 351
>ZFIN|ZDB-GENE-060929-388 [details] [associations]
symbol:vps4a "vacuolar protein sorting 4a (yeast)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-060929-388
GO:GO:0005524 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 HOVERGEN:HBG057074 SMART:SM00745
CTD:27183 KO:K12196 EMBL:BC124488 IPI:IPI00804704
RefSeq:NP_001070077.1 UniGene:Dr.161728 ProteinModelPortal:Q08BZ6
SMR:Q08BZ6 STRING:Q08BZ6 PRIDE:Q08BZ6 GeneID:767670 KEGG:dre:767670
NextBio:20918061 Uniprot:Q08BZ6
Length = 440
Score = 161 (61.7 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 61/216 (28%), Positives = 103/216 (47%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + V++ L SKW ES KLV
Sbjct: 159 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSVSSSDLMSKWLGESEKLVK 209
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LF ++ + +++F IDEV+SL +R + SE + I+ L+ ++
Sbjct: 210 NLFDLARQ---HKPSIIF--IDEVDSLCGSRNE--NESEAARRIKT-EFLVQMQGVGNNN 261
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCL----QELIRTGIISN 368
+++L +NI +D A R + + Y+ P AR + R L L +
Sbjct: 262 DGILVLGATNIPWVLDAAIRRRFEKRIYIPLPEEPARSAMFRLHLGNTPHSLTEADLRQL 321
Query: 369 FQDCDQSMLPNFSIL-KEKLSNPDIQEADRSQHFYK 403
+ D + SI+ ++ L P +++ + HF K
Sbjct: 322 ARKTDGYSGADISIIVRDALMQP-VRKVQSATHFKK 356
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 160 (61.4 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 51/194 (26%), Positives = 93/194 (47%)
Query: 186 VNPFL-----VSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+NP+L + + VLL+GPPGTGKT L +A+A ++ C + + ++
Sbjct: 158 LNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNIN---------CNFMRIVVSAIV 208
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ ES +++ ++F +E + ++F+ DE++++ R+ + S + R +
Sbjct: 209 DKYIGESARIIREMFNYAKE---HQPCIIFM--DEIDAIGG-RRFSQGTSADREIQRTLM 262
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQ 358
LL +D + NV I+ +N +D A V R D K + P AR EIL+
Sbjct: 263 ELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHAN 322
Query: 359 ELIRTGIISNFQDC 372
++ + G I C
Sbjct: 323 KMTKLGDIDYESVC 336
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 160 (61.4 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 51/194 (26%), Positives = 93/194 (47%)
Query: 186 VNPFL-----VSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+NP+L + + VLL+GPPGTGKT L +A+A ++ C + + ++
Sbjct: 158 LNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNIN---------CNFMRIVVSAIV 208
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ ES +++ ++F +E + ++F+ DE++++ R+ + S + R +
Sbjct: 209 DKYIGESARIIREMFNYAKE---HQPCIIFM--DEIDAIGG-RRFSQGTSADREIQRTLM 262
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQ 358
LL +D + NV I+ +N +D A V R D K + P AR EIL+
Sbjct: 263 ELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHAN 322
Query: 359 ELIRTGIISNFQDC 372
++ + G I C
Sbjct: 323 KMTKLGDIDYESVC 336
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 164 (62.8 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 66/226 (29%), Positives = 110/226 (48%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VLL GPPG GKT L +A+A++ +L+ V+A +L E+ + V ++
Sbjct: 228 RGVLLAGPPGVGKTQLVRAVAREAG---------AELLAVSAPALQGTRPGETEENVRRV 278
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
FQ+ QE+ +L+F +DEV++L R G + + RVV +LT +D +
Sbjct: 279 FQRAQELASRGPSLLF--LDEVDALCPRR----GGPQRAPESRVVAQVLTLLDGIHGDRE 332
Query: 315 VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILRSCLQEL-----IRTGIIS 367
V+++ +N +D A R D + +G PTL+ R IL ++ I G+++
Sbjct: 333 VVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVITSKMPISSHIDLGLLA 392
Query: 368 N----FQDCDQSML----PNFSILK-EK-LSNPDIQEADRSQHFYK 403
+ D + L ++LK EK +NP I+E D + F K
Sbjct: 393 EMTVGYVGADLTALCREAATCALLKNEKNQNNPKIEETDFLEAFKK 438
Score = 146 (56.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K +L L F ++ L + +LL+GPPG KT+L +ALA
Sbjct: 458 WEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQ-PKGLLLYGPPGCAKTTLVRALATS 516
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
C V V LFS + +S K+++++F++ + N V +DE++
Sbjct: 517 C---------HCSFVSVCGADLFSPFVGDSEKVLSQVFRQARA-----NTPALVFLDEID 562
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKL----------KSSP---------NVIIL 318
S+ +R SG + + RV++ LL ++D + K+S +V+I+
Sbjct: 563 SVLGSRSVGSSGCDARE--RVLSVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIV 620
Query: 319 TTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQEL 360
+N +D A + R D YV PP + R IL+ C +
Sbjct: 621 VATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNM 664
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 164 (62.8 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 52/162 (32%), Positives = 83/162 (51%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VLL GPPG GKT L +A+A++ +L+ V+A +L E+ + V ++
Sbjct: 235 RGVLLAGPPGVGKTQLVRAVAREAG---------AELLAVSAPALQGARPGETEENVRRV 285
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
FQ+ QE+ L+F +DEV++L R G + RVV +LT +D +
Sbjct: 286 FQRAQELAGRRPTLLF--LDEVDALCPRR----GGPHQAPESRVVAQVLTLLDGISGDRE 339
Query: 315 VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 354
V+++ ++N A+D A R D + +G PTL R IL+
Sbjct: 340 VVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQ 381
Score = 159 (61.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 61/224 (27%), Positives = 103/224 (45%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + K++L L F + V L + VLL+GPPG KT+L +ALA
Sbjct: 465 WEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQ-PKGVLLYGPPGCAKTTLVRALATS 523
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
C V V+ LFS + +S K+++++FQ+ + N V +DE++
Sbjct: 524 C---------HCSFVSVSGADLFSPFVGDSEKILSQVFQQARA-----NTPAVVFLDEID 569
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMDKL----------KS---------SPNVIIL 318
S+ +R + +G + RV++ LL ++D + KS + NV+I+
Sbjct: 570 SILGSRSISKTGCNVQE--RVLSVLLNELDGVGLKTIERRGSKSDQHEFQEVFNSNVMIV 627
Query: 319 TTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQEL 360
+N +D A + R D Y+ PP ++R ILR C + +
Sbjct: 628 AATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNM 671
>UNIPROTKB|B4DFA2 [details] [associations]
symbol:NSF "cDNA FLJ59316, highly similar to Vesicle-fusing
ATPase (EC 3.6.4.6)" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006813 "potassium ion transport"
evidence=IEA] [GO:0019905 "syntaxin binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016192 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0006813 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 GO:GO:0017157
EMBL:AC138645 HOVERGEN:HBG000324 EMBL:AC217780 UniGene:Hs.431279
HGNC:HGNC:8016 ChiTaRS:NSF EMBL:AK294001 IPI:IPI00985110 SMR:B4DFA2
STRING:B4DFA2 Ensembl:ENST00000225282 Uniprot:B4DFA2
Length = 644
Score = 163 (62.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 162 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 213
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 214 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 271
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 272 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 313
>UNIPROTKB|Q5ZMI9 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA] [GO:0033993 "response to lipid"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 GO:GO:0007032 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
KO:K12196 CTD:9525 OMA:AKCAEYL EMBL:AC159826 EMBL:AJ719395
IPI:IPI00582043 RefSeq:NP_001006378.2 UniGene:Gga.8210 SMR:Q5ZMI9
STRING:Q5ZMI9 Ensembl:ENSGALT00000021007 GeneID:420901
KEGG:gga:420901 InParanoid:Q5ZMI9 NextBio:20823751 Uniprot:Q5ZMI9
Length = 438
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 51/157 (32%), Positives = 78/157 (49%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + V++ L SKW ES KLV
Sbjct: 162 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSVSSSDLVSKWLGESEKLVK 212
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LFQ + EN + IDE++SL +R + SE + I+ L+ +
Sbjct: 213 NLFQ-----LARENKPSIIFIDEIDSLCGSRSE--NESEAARRIKT-EFLVQMQGVGVDN 264
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQAR 349
+++L +NI +D A R + + Y+ P AR
Sbjct: 265 EGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEDHAR 301
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/203 (26%), Positives = 96/203 (47%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
++ + G++P R VLL+GPPGTGKT L KA+A + F + V
Sbjct: 159 LYRQIGIDP-----PRGVLLYGPPGTGKTMLVKAVANSTAANF---------IRVVGSEF 204
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
K+ E ++V +F+ + EN + IDE++++A R A +G++ + R++
Sbjct: 205 VQKYLGEGPRMVRDVFR-----MARENAPAIIFIDEIDAIATKRFDAQTGAD-REVQRIL 258
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQE 359
LLTQMD NV ++ +N +D A + + + P+ + R + R Q
Sbjct: 259 IELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQ-RRLVFQT 317
Query: 360 LIRTGIISNFQDCDQSML-PNFS 381
+ ++S D D ++ P+ S
Sbjct: 318 ITAKMLLSPEVDLDTFIMRPDAS 340
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 54/181 (29%), Positives = 89/181 (49%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
++ + G++P R VLL+GPPGTGKT L KA+A S F + V
Sbjct: 175 LYKQIGIDP-----PRGVLLYGPPGTGKTMLAKAVAHHTSAAF---------IRVVGSEF 220
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 299
K+ E +LV +F+ + EN+ + IDE++++A R A +G++ + R++
Sbjct: 221 VQKYLGEGPRLVRDVFR-----LARENSPAIIFIDEIDAIATKRFDAQTGAD-REVQRIL 274
Query: 300 NALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKA-YVGPPTLQAR--YEILR 354
LL QMD S NV ++ +N +D A + R D K + P Q R ++++
Sbjct: 275 MELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVIT 334
Query: 355 S 355
S
Sbjct: 335 S 335
>UNIPROTKB|I3L0N3 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016192
GO:GO:0015031 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0017157 EMBL:AC138645 EMBL:AC217780 HGNC:HGNC:8016
ChiTaRS:NSF ProteinModelPortal:I3L0N3 SMR:I3L0N3 PRIDE:I3L0N3
Ensembl:ENST00000575068 Bgee:I3L0N3 Uniprot:I3L0N3
Length = 739
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 251 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 302
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 303 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 360
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 361 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 402
>UNIPROTKB|E1C646 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00821151
Ensembl:ENSGALT00000040844 ArrayExpress:E1C646 Uniprot:E1C646
Length = 744
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/162 (28%), Positives = 87/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL+GPPG GKT + + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLMARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 257 KIQEMVEE--ENNLVFVLI-DEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
+E N+ V ++I DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R++IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQIL 407
>UNIPROTKB|P46459 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0006887 "exocytosis" evidence=TAS] [GO:0045026 "plasma membrane
fusion" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0001921
"positive regulation of receptor recycling" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_13685 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0032403 GO:GO:0046872 GO:GO:0015031
GO:GO:0007268 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
GO:GO:0006887 eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 GO:GO:0017157
GO:GO:0045026 EMBL:AC138645 KO:K06027 OMA:IFTLRTH
HOGENOM:HOG000198544 HOVERGEN:HBG000324 EMBL:U03985 EMBL:AF135168
EMBL:AF102846 EMBL:AK290204 EMBL:AC004098 EMBL:AC138688
EMBL:AC217769 EMBL:AC217778 EMBL:AC217780 EMBL:BC030613
IPI:IPI00006451 PIR:G01234 RefSeq:NP_006169.2 UniGene:Hs.431279
ProteinModelPortal:P46459 SMR:P46459 DIP:DIP-389N IntAct:P46459
MINT:MINT-1369243 STRING:P46459 TCDB:1.F.1.1.1 PhosphoSite:P46459
DMDM:257051048 UCD-2DPAGE:P46459 PaxDb:P46459 PRIDE:P46459
Ensembl:ENST00000398238 GeneID:4905 KEGG:hsa:4905 UCSC:uc002iku.3
CTD:4905 GeneCards:GC17P044668 H-InvDB:HIX0013914
H-InvDB:HIX0013915 HGNC:HGNC:8016 HPA:CAB009324 HPA:CAB013645
HPA:HPA003154 MIM:601633 neXtProt:NX_P46459 PharmGKB:PA31793
InParanoid:P46459 OrthoDB:EOG4DZ1TR PhylomeDB:P46459 ChiTaRS:NSF
GenomeRNAi:4905 NextBio:18875 PMAP-CutDB:P46459 ArrayExpress:P46459
Bgee:P46459 CleanEx:HS_NSF Genevestigator:P46459
GermOnline:ENSG00000073969 Uniprot:P46459
Length = 744
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407
>UNIPROTKB|P18708 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:10029
"Cricetulus griseus" [GO:0030496 "midbody" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0015031 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0030496 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 EMBL:X15652 PIR:S04235 PDB:1D2N
PDB:1NSF PDB:1QCS PDB:1QDN PDBsum:1D2N PDBsum:1NSF PDBsum:1QCS
PDBsum:1QDN ProteinModelPortal:P18708 SMR:P18708 DIP:DIP-35598N
IntAct:P18708 PRIDE:P18708 HOVERGEN:HBG000324
EvolutionaryTrace:P18708 Uniprot:P18708
Length = 744
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407
>MGI|MGI:104560 [details] [associations]
symbol:Nsf "N-ethylmaleimide sensitive fusion protein"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0015031 "protein
transport" evidence=ISO] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=ISO] [GO:0017157 "regulation of
exocytosis" evidence=ISO] [GO:0019905 "syntaxin binding"
evidence=IDA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0043008 "ATP-dependent
protein binding" evidence=ISO] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
MGI:MGI:104560 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524
GO:GO:0016192 GO:GO:0046872 GO:GO:0015031 GO:GO:0043198
GO:GO:0005795 GO:GO:0019905 GO:GO:0006813 eggNOG:COG0464
GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 GeneTree:ENSGT00530000064085 KO:K06027
OMA:IFTLRTH HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR
ChiTaRS:NSF EMBL:U10120 EMBL:AK028415 EMBL:AK032120 EMBL:AK049281
EMBL:AK051430 EMBL:AK085086 EMBL:AK153905 EMBL:AL596108
EMBL:AL603829 EMBL:BC006627 EMBL:BC019167 IPI:IPI00656325
RefSeq:NP_032766.2 UniGene:Mm.260117 UniGene:Mm.474887
ProteinModelPortal:P46460 SMR:P46460 IntAct:P46460 MINT:MINT-89339
STRING:P46460 PhosphoSite:P46460 REPRODUCTION-2DPAGE:P46460
PaxDb:P46460 PRIDE:P46460 Ensembl:ENSMUST00000103075 GeneID:18195
KEGG:mmu:18195 UCSC:uc007lvt.1 InParanoid:P46460 NextBio:293548
Bgee:P46460 CleanEx:MM_NSF Genevestigator:P46460
GermOnline:ENSMUSG00000034187 Uniprot:P46460
Length = 744
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407
>RGD|621594 [details] [associations]
symbol:Nsf "N-ethylmaleimide-sensitive factor" species:10116
"Rattus norvegicus" [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IDA;TAS] [GO:0006813 "potassium ion
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=TAS]
[GO:0006944 "cellular membrane fusion" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0014069 "postsynaptic
density" evidence=IDA;TAS] [GO:0015031 "protein transport"
evidence=IMP] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA;TAS]
[GO:0017137 "Rab GTPase binding" evidence=IDA] [GO:0017157
"regulation of exocytosis" evidence=IMP] [GO:0019905 "syntaxin
binding" evidence=ISO] [GO:0030165 "PDZ domain binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0043008
"ATP-dependent protein binding" evidence=IPI] [GO:0043198
"dendritic shaft" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 RGD:621594 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0014069 GO:GO:0046872 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0016887 GO:GO:0006813
eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0017137 GO:GO:0007269 GO:GO:0042623
GO:GO:0006906 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 KO:K06027 HOGENOM:HOG000198544
HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR EMBL:AF142097
EMBL:AF189019 IPI:IPI00210635 RefSeq:NP_068516.1 UniGene:Rn.13345
HSSP:P18708 ProteinModelPortal:Q9QUL6 SMR:Q9QUL6 IntAct:Q9QUL6
STRING:Q9QUL6 PhosphoSite:Q9QUL6 World-2DPAGE:0004:Q9QUL6
PRIDE:Q9QUL6 GeneID:60355 KEGG:rno:60355 UCSC:RGD:621594
InParanoid:Q9QUL6 NextBio:612027 ArrayExpress:Q9QUL6
Genevestigator:Q9QUL6 GermOnline:ENSRNOG00000003905 Uniprot:Q9QUL6
Length = 744
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 64/222 (28%), Positives = 100/222 (45%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPG GKT L KA+A + + F + + VEV V LF++
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGP-EFVEVIG--------GLGAARVRSLFKE 396
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
+ V IDE++++ R ++SG ++ + +N LL +MD + ++ +VI+
Sbjct: 397 ARARAP-----CIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIV 451
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQS 375
L ++N +D A + R D ++ PTLQ R EI L+ L T S +
Sbjct: 452 LASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAE 511
Query: 376 MLPNFS--ILKEKLSNPDIQEA---DRSQH-FYKQLLEAAEA 411
+ P FS K K+ + + Q S H LLE EA
Sbjct: 512 LTPGFSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEA 553
>UNIPROTKB|F1LQ81 [details] [associations]
symbol:Nsf "Vesicle-fusing ATPase" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:621594 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
IPI:IPI00210635 PRIDE:F1LQ81 Ensembl:ENSRNOT00000006361
ArrayExpress:F1LQ81 Uniprot:F1LQ81
Length = 744
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 64/222 (28%), Positives = 100/222 (45%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPG GKT L KA+A + + F + + VEV V LF++
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGP-EFVEVIG--------GLGAARVRSLFKE 396
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
+ V IDE++++ R ++SG ++ + +N LL +MD + ++ +VI+
Sbjct: 397 ARARAP-----CIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIV 451
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQS 375
L ++N +D A + R D ++ PTLQ R EI L+ L T S +
Sbjct: 452 LASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAE 511
Query: 376 MLPNFS--ILKEKLSNPDIQEA---DRSQH-FYKQLLEAAEA 411
+ P FS K K+ + + Q S H LLE EA
Sbjct: 512 LTPGFSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEA 553
>UNIPROTKB|E1BQU4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00589241
Ensembl:ENSGALT00000001581 ArrayExpress:E1BQU4 Uniprot:E1BQU4
Length = 745
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/162 (28%), Positives = 87/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL+GPPG GKT + + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLMARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 257 KIQEMVEE--ENNLVFVLI-DEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
+E N+ V ++I DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R++IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQIL 407
>UNIPROTKB|F1P6Z3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0019905
"syntaxin binding" evidence=IEA] [GO:0006813 "potassium ion
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006813 GO:GO:0001921
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 EMBL:AAEX03006344
Ensembl:ENSCAFT00000021409 Uniprot:F1P6Z3
Length = 745
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 257 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 308
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 309 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 366
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 367 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 408
>UNIPROTKB|F1MZU2 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=IEA] [GO:0019905 "syntaxin binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:DAAA02049275 EMBL:DAAA02049276 IPI:IPI00721227
Ensembl:ENSBTAT00000011107 Uniprot:F1MZU2
Length = 746
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407
>UNIPROTKB|E1C649 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0030165 "PDZ
domain binding" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00823263
Ensembl:ENSGALT00000040841 ArrayExpress:E1C649 Uniprot:E1C649
Length = 747
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/162 (28%), Positives = 87/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL+GPPG GKT + + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLMARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 257 KIQEMVEE--ENNLVFVLI-DEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
+E N+ V ++I DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R++IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQIL 407
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 60/191 (31%), Positives = 91/191 (47%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESG-KLVAK 253
R +L GPPGTGKT + KA A + ++ F S + S F + F G V
Sbjct: 336 RGAILVGPPGTGKTLIAKATAGEANVPFYS----------TSGSDFVEMFVGVGPSRVRD 385
Query: 254 LFQKIQEMVEEENNLVFVLIDEVESLAAAR-KAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LF++ ++ N V IDE++++ AR K SGS + +N LL +MD K
Sbjct: 386 LFEQARK-----NAPCIVFIDEIDAVGRARGKGGFSGSN-DERENTLNQLLVEMDGFKPL 439
Query: 313 PNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQ 370
NV++L +N +D A + R D + + P L++R EI R L L+ I N+
Sbjct: 440 KNVVVLAATNRPDILDKALLRPGRFDRQITIDNPDLKSREEIFRVHLAALLLDKSI-NYA 498
Query: 371 DCDQSMLPNFS 381
+ + P FS
Sbjct: 499 ERLSKLTPGFS 509
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 163 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 213
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 214 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 266
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 267 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 306
>UNIPROTKB|E2RFV4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AAEX03006344 Ensembl:ENSCAFT00000021411
Uniprot:E2RFV4
Length = 811
Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 315 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 366
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 367 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 424
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 425 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 466
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 49/172 (28%), Positives = 87/172 (50%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPGTGKT L +A+A +L C ++V + ++ K+ ES +++ ++F
Sbjct: 188 LLFGPPGTGKTLLARAVASQLD---------CNFLKVVSSAIVDKYIGESARMIREMFNY 238
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + +VF+ DE++++ R + G+ I R + LL Q+D S V
Sbjct: 239 ARD---HQPCIVFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQLDGFDSLGKVK 291
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
++ +N +D A + R D K +G P Q+R EIL+ ++ + G I
Sbjct: 292 VIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEI 343
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 49/172 (28%), Positives = 87/172 (50%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPGTGKT L +A+A +L C ++V + ++ K+ ES +++ ++F
Sbjct: 188 LLFGPPGTGKTLLARAVASQLD---------CNFLKVVSSAIVDKYIGESARMIREMFNY 238
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + +VF+ DE++++ R + G+ I R + LL Q+D S V
Sbjct: 239 ARD---HQPCIVFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQLDGFDSLGKVK 291
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
++ +N +D A + R D K +G P Q+R EIL+ ++ + G I
Sbjct: 292 VIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEI 343
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG KT + KALA + + F + + L +K+ ES + V ++F+
Sbjct: 664 VLLYGPPGCSKTMIAKALANESGLNF---------LAIKGPELMNKYVGESERAVREIFR 714
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K + + +++F DE+++LA R ++ +D RV+ LLT+MD ++ +V
Sbjct: 715 KARAV---SPSIIF--FDELDALAIERGSSSGAGNVAD--RVLAQLLTEMDGIEQLKDVT 767
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
IL +N ID A + R D YV P R EIL
Sbjct: 768 ILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIL 806
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/168 (28%), Positives = 81/168 (48%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VLL+GPPGTGKT + +A+A ++ S +N + SK++ E+ A+L
Sbjct: 388 RGVLLYGPPGTGKTMIARAVANEVGAYVSV---------INGPEIISKFYGETE---ARL 435
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
Q E +++F IDE+++L R+ A + E + + L+ + S
Sbjct: 436 RQIFAEATLRHPSIIF--IDELDALCPKREGAQNEVEKR-VVASLLTLMDGIGSEGSEGQ 492
Query: 315 VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILRSCLQEL 360
V++L +N A+D A R D + +G P R +IL+ LQ +
Sbjct: 493 VLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQRV 540
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 53/160 (33%), Positives = 84/160 (52%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL GPPG GKT L KA+A++ + Y C ++ +L+ ES + + +F+
Sbjct: 234 VLLVGPPGVGKTLLVKAVARE-----AGAYLLC----ISGPALYGSRPGESEENLRSVFE 284
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K +EM E ++F IDE+++L R + S S P D R+V LLT +D + ++
Sbjct: 285 KGREMSCEGPTVLF--IDEIDALCPKRGS--SNSAPED--RLVAQLLTLLDGVGRKDRMV 338
Query: 317 ILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 354
++ +N A+D A R D + +G PTL R IL+
Sbjct: 339 VVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQ 378
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 49/186 (26%), Positives = 90/186 (48%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GP G KT+L KA+A C + V+ LFS + +S K+++++F+
Sbjct: 500 VLLYGPSGCAKTTLVKAVATSC---------HCSFLSVSGAELFSPYVGDSEKILSQVFR 550
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMD--------- 307
+ + N + +DE++S+ +R + SG S+ RV++ LL ++D
Sbjct: 551 QARA-----NTPAIIFLDEIDSILGSRSHSKSGHGVSE--RVLSVLLNELDGVGLKVTER 603
Query: 308 ---KLKS--------SPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
KL+ S + +++ +N +D A + R D Y+ PP L+ R IL+
Sbjct: 604 RGNKLQLELEFQETLSRDFMVVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKGRLSILK 663
Query: 355 SCLQEL 360
C +++
Sbjct: 664 ICTEKI 669
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 54/186 (29%), Positives = 86/186 (46%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPG GKT L KA+A + + F + + VEV V LF++
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGP-EFVEVIG--------GLGAARVRSLFKE 396
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
+ V IDE++++ R +SG ++ + +N LL +MD + ++ +VI+
Sbjct: 397 ARARAP-----CIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIV 451
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQS 375
L ++N +D A + R D ++ PTLQ R EI L+ L T S +
Sbjct: 452 LASTNRADILDNALLRPGRLDRHVFIDLPTLQERREIFEHHLKSLKLTQASSFYSQRLAE 511
Query: 376 MLPNFS 381
+ P FS
Sbjct: 512 LTPGFS 517
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 48/165 (29%), Positives = 76/165 (46%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPGTGKT L KA A + + F + VN + V +F
Sbjct: 340 LLTGPPGTGKTLLAKATAGEAGVPF---------ITVNGSEFLEMFVGVGPARVRDMFA- 389
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
+ +N + +DE++++ R G + S+ +N LL +MD S+ NV++
Sbjct: 390 ----LARKNAPCILFVDEIDAIGRKRGRGHFGGQ-SEQENTLNQLLVEMDGFNSTTNVVV 444
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQEL 360
L +N +D A + R D + Y+GPP ++ R I R L+ L
Sbjct: 445 LAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRSSIFRVHLRPL 489
>TAIR|locus:2031005 [details] [associations]
symbol:AT1G50140 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010332
"response to gamma radiation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016926
"protein desumoylation" evidence=RCA] [GO:0032204 "regulation of
telomere maintenance" evidence=RCA] [GO:0032504 "multicellular
organism reproduction" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043247 "telomere
maintenance in response to DNA damage" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GO:GO:0005524 GO:GO:0017111
IPI:IPI00520428 RefSeq:NP_175433.2 UniGene:At.38089
ProteinModelPortal:F4I4Y6 SMR:F4I4Y6 PRIDE:F4I4Y6
EnsemblPlants:AT1G50140.1 GeneID:841436 KEGG:ath:AT1G50140
OMA:TRTIRRN Uniprot:F4I4Y6
Length = 1003
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LL GPPGTGKT L KALA + F + + +L SKWF ++ KL LF
Sbjct: 752 ILLFGPPGTGKTLLAKALATEAGANF---------ISITGSTLTSKWFGDAEKLTKALFS 802
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
++ V + +DE++SL AR + S E + +R + K S ++
Sbjct: 803 FATKLAP-----VIIFVDEIDSLLGARGGS-SEHEATRRMRNEFMAAWDGLRSKDSQRIL 856
Query: 317 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 354
IL +N +D A + R + YV P + R +IL+
Sbjct: 857 ILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILK 894
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 171 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 222 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 274
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 275 MIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILK 314
>TAIR|locus:2137777 [details] [associations]
symbol:AT4G27680 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161571 GO:GO:0000502
HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111 HOGENOM:HOG000225141
EMBL:AL035602 OMA:EMCRNAS ProtClustDB:CLSN2685508 EMBL:AY093063
EMBL:AY085265 EMBL:BT000126 EMBL:AK226334 IPI:IPI00547334
PIR:T05873 RefSeq:NP_194498.1 UniGene:At.32076
ProteinModelPortal:Q9T090 SMR:Q9T090 STRING:Q9T090 PaxDb:Q9T090
PRIDE:Q9T090 EnsemblPlants:AT4G27680.1 GeneID:828882
KEGG:ath:AT4G27680 TAIR:At4g27680 InParanoid:Q9T090
PhylomeDB:Q9T090 Genevestigator:Q9T090 Uniprot:Q9T090
Length = 398
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 49/162 (30%), Positives = 80/162 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L KA+A++ F + V +L SKWF ++ KLV+ +F
Sbjct: 122 VLLYGPPGTGKTMLAKAIAKESGAVF---------INVRVSNLMSKWFGDAQKLVSAVFS 172
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
++ + ++F IDEVES R++ + E +++ L V+
Sbjct: 173 LAYKL---QPAIIF--IDEVESFLGQRRS--TDHEAMANMKTEFMALWDGFSTDPHARVM 225
Query: 317 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
+L +N + +D A + R +G P + R EIL+ L+
Sbjct: 226 VLAATNRPSELDEAILRRLPQAFEIGIPDRRERAEILKVTLK 267
>TAIR|locus:2135378 [details] [associations]
symbol:NSF "N-ethylmaleimide sensitive factor"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0009506 GO:GO:0005524
GO:GO:0005794 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016192 GO:GO:0046872 EMBL:AL161502 GO:GO:0015031
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
EMBL:AF128393 KO:K06027 EMBL:AY102111 IPI:IPI00527613 PIR:G85061
RefSeq:NP_192400.2 UniGene:At.33942 UniGene:At.67369
ProteinModelPortal:Q9M0Y8 SMR:Q9M0Y8 IntAct:Q9M0Y8 STRING:Q9M0Y8
PaxDb:Q9M0Y8 PRIDE:Q9M0Y8 EnsemblPlants:AT4G04910.1 GeneID:825830
KEGG:ath:AT4G04910 GeneFarm:2444 TAIR:At4g04910
HOGENOM:HOG000198544 InParanoid:Q9M0Y8 OMA:MTSGQRV PhylomeDB:Q9M0Y8
ProtClustDB:CLSN2690750 Genevestigator:Q9M0Y8 GermOnline:AT4G04910
Uniprot:Q9M0Y8
Length = 742
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 46/163 (28%), Positives = 88/163 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL GPPGTGKT + + + + L+ + P+ VN + SK+ E+ K V LF
Sbjct: 253 MLLFGPPGTGKTLMARQIGKMLN----GKDPKI----VNGPEVLSKFVGETEKNVRDLFA 304
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + + L ++ DE++++ +R + G+ DSI VN LLT++D +++
Sbjct: 305 DAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSI--VNQLLTKIDGVEALN 362
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
NV+++ +N +D A + R +++ + P R +IL+
Sbjct: 363 NVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQ 405
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/188 (28%), Positives = 85/188 (45%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
+L GPPGTGKT L KA A + ++ F + VN + V LF
Sbjct: 189 ILTGPPGTGKTLLAKATAGEANVPF---------ITVNGSEFLEMFVGVGPARVRDLFA- 238
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
+ +N + IDE++++ R G + S+ +N LL +MD ++ NV+I
Sbjct: 239 ----LARKNAPCILFIDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVI 293
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIIS--NFQDCD 373
L +N +D A + R D + Y+GPP ++ R I + L+ L ++ N
Sbjct: 294 LAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKL 353
Query: 374 QSMLPNFS 381
S+ P FS
Sbjct: 354 ASLTPGFS 361
>SGD|S000000284 [details] [associations]
symbol:SEC18 "ATPase required for vesicular transport between
ER and Golgi" species:4932 "Saccharomyces cerevisiae" [GO:0048280
"vesicle fusion with Golgi apparatus" evidence=IDA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IDA] [GO:0048219
"inter-Golgi cisterna vesicle-mediated transport" evidence=IMP]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=IMP] [GO:0048211 "Golgi vesicle docking" evidence=IDA]
[GO:0035494 "SNARE complex disassembly" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0043332 "mating projection tip"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0000045 "autophagic
vacuole assembly" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000000284 Pfam:PF02359
GO:GO:0005524 GO:GO:0005737 GO:GO:0043332 GO:GO:0000045
EMBL:BK006936 GO:GO:0016887 KO:K09448 eggNOG:COG0464
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 EMBL:X76294
GO:GO:0043001 GO:GO:0048280 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 EMBL:AF004912
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 GO:GO:0048219 GO:GO:0035494 OrthoDB:EOG4PVS6W
EMBL:M20662 EMBL:Z35949 PIR:S45477 RefSeq:NP_009636.3
RefSeq:NP_009639.3 PDB:1CR5 PDBsum:1CR5 ProteinModelPortal:P18759
SMR:P18759 DIP:DIP-2497N IntAct:P18759 MINT:MINT-707733
STRING:P18759 PaxDb:P18759 PRIDE:P18759 EnsemblFungi:YBR080C
GeneID:852372 GeneID:852377 KEGG:sce:YBR080C KEGG:sce:YBR083W
CYGD:YBR080c EvolutionaryTrace:P18759 NextBio:971158
Genevestigator:P18759 GermOnline:YBR080C GO:GO:0048211
Uniprot:P18759
Length = 758
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 54/229 (23%), Positives = 110/229 (48%)
Query: 170 RLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQC 229
++ A ++ +F + +S + +LL+GPPGTGKT +A+K+ +++ P+
Sbjct: 250 KIFRRAFASRIFPPSVIEKLGISHVKGLLLYGPPGTGKT----LIARKIGTMLNAKEPKI 305
Query: 230 QLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVE---EENNLVFVLIDEVESLAAARKAA 286
VN + SK+ S + + LF+ + EE++L ++ DE++S+ R +
Sbjct: 306 ----VNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSR 361
Query: 287 LSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPP 344
G+ D+ VVN LL +MD + N++++ +N ID A + R +++ + P
Sbjct: 362 GDGTGVGDN--VVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLP 419
Query: 345 TLQARYEILRSCLQELIRTGIISNFQDCDQSMLPNFSILKEKLSNPDIQ 393
+ R +I +++ ++S D L + L + S +I+
Sbjct: 420 DEKGRLQIFDIQTKKMRENNMMS-----DDVNLAELAALTKNFSGAEIE 463
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 54/186 (29%), Positives = 87/186 (46%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPG GKT L KA+A + + F + + VEV V LF++
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGP-EFVEVIG--------GLGAARVRSLFKE 396
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
+ V IDE++++ R ++SG ++ + +N LL +MD + ++ +VI+
Sbjct: 397 ARARAP-----CIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIV 451
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQS 375
L ++N +D A + R D ++ PTLQ R EI L+ L T S +
Sbjct: 452 LASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAE 511
Query: 376 MLPNFS 381
+ P FS
Sbjct: 512 LTPGFS 517
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 55/149 (36%), Positives = 75/149 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L KA+A + S+ F S V L + + ES K V +F+
Sbjct: 694 VLLYGPPGTGKTLLAKAVATECSLNFLS---------VKGPELINMYIGESEKNVRDIFE 744
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK-SSPNV 315
K + + DE++SLA AR A SG RVV+ +L ++D L SS ++
Sbjct: 745 KARSA-----RPCVIFFDELDSLAPARGA--SGDSGGVMDRVVSQMLAEIDGLSDSSQDL 797
Query: 316 IILTTSNITAAIDIAFV--DRADIKAYVG 342
I+ SN ID A + R D YVG
Sbjct: 798 FIIGASNRPDLIDPALLRPGRFDKLLYVG 826
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 135 (52.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 232 VEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSE 291
+ V +FSK+ ES K + +F+K +E N+ + DE++S+A R + ++
Sbjct: 898 ISVKGPEIFSKYVGESEKSIRNIFKKARE-----NHPCVIFFDEIDSIAVNR----NNNQ 948
Query: 292 PSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQAR 349
S RV+ LL ++D +K+ NVIIL +N ID A + R D YV P +R
Sbjct: 949 NFVSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSR 1008
Query: 350 YEILRSCLQ 358
+ IL+ L+
Sbjct: 1009 FAILKKNLK 1017
Score = 108 (43.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 34/125 (27%), Positives = 60/125 (48%)
Query: 244 FSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNAL 302
++ +G + +LF + + +EEN + IDE+E L R E ++++ + + L
Sbjct: 532 YNNTGYKINELFLRCHKRYQEENKCTIIFIDEIEILCKKR-------EENNNMNIYTSVL 584
Query: 303 LTQMDKLKSSPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILRSCLQEL 360
L MD +K + I++ +N ID+A R D + V P L+ R I + L L
Sbjct: 585 LNNMDGIKKHTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLN-L 643
Query: 361 IRTGI 365
I+ I
Sbjct: 644 IKHNI 648
Score = 77 (32.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 143 SFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGP 202
+ + ++ KE G+ + Y +K+ + +Y L++ + + + ++ +LLHGP
Sbjct: 409 NLKKMVVNKKEKKGLNKLGGYNK-IKEDIYYYILIPLIYKHI-YDAYHIDIHKGILLHGP 466
Query: 203 PGTGKTSLCKALAQKLSI 220
PG GKT + + ++LS+
Sbjct: 467 PGCGKTYIALLIKEELSL 484
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 135 (52.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 232 VEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSE 291
+ V +FSK+ ES K + +F+K +E N+ + DE++S+A R + ++
Sbjct: 898 ISVKGPEIFSKYVGESEKSIRNIFKKARE-----NHPCVIFFDEIDSIAVNR----NNNQ 948
Query: 292 PSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQAR 349
S RV+ LL ++D +K+ NVIIL +N ID A + R D YV P +R
Sbjct: 949 NFVSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSR 1008
Query: 350 YEILRSCLQ 358
+ IL+ L+
Sbjct: 1009 FAILKKNLK 1017
Score = 108 (43.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 34/125 (27%), Positives = 60/125 (48%)
Query: 244 FSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNAL 302
++ +G + +LF + + +EEN + IDE+E L R E ++++ + + L
Sbjct: 532 YNNTGYKINELFLRCHKRYQEENKCTIIFIDEIEILCKKR-------EENNNMNIYTSVL 584
Query: 303 LTQMDKLKSSPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILRSCLQEL 360
L MD +K + I++ +N ID+A R D + V P L+ R I + L L
Sbjct: 585 LNNMDGIKKHTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLN-L 643
Query: 361 IRTGI 365
I+ I
Sbjct: 644 IKHNI 648
Score = 77 (32.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 143 SFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGP 202
+ + ++ KE G+ + Y +K+ + +Y L++ + + + ++ +LLHGP
Sbjct: 409 NLKKMVVNKKEKKGLNKLGGYNK-IKEDIYYYILIPLIYKHI-YDAYHIDIHKGILLHGP 466
Query: 203 PGTGKTSLCKALAQKLSI 220
PG GKT + + ++LS+
Sbjct: 467 PGCGKTYIALLIKEELSL 484
>ZFIN|ZDB-GENE-040426-1235 [details] [associations]
symbol:vps4b "vacuolar protein sorting 4b (yeast)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-1235 GO:GO:0005524 Pfam:PF04212 HSSP:Q01853
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 HOVERGEN:HBG057074
SMART:SM00745 KO:K12196 CTD:9525 EMBL:BC055202 IPI:IPI00836860
RefSeq:NP_957200.1 UniGene:Dr.85231 ProteinModelPortal:Q7SXY0
SMR:Q7SXY0 STRING:Q7SXY0 PRIDE:Q7SXY0 GeneID:393880 KEGG:dre:393880
NextBio:20814861 ArrayExpress:Q7SXY0 Bgee:Q7SXY0 Uniprot:Q7SXY0
Length = 437
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 60/218 (27%), Positives = 108/218 (49%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + +++ L SKW ES KLV
Sbjct: 160 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSISSSDLVSKWLGESEKLVK 210
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LF +E + +++F IDE++SL +R + SE + I+ L+ +
Sbjct: 211 SLFTLARE---HKPSIIF--IDEIDSLCGSRSE--NESEAARRIKT-EFLVQMQGVGNDN 262
Query: 313 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQAR---YEI-LRSCLQELIRTGIISN 368
+++L +NI +D A R + + Y+ P AR +++ L + L + ++
Sbjct: 263 EGILVLGATNIPWTLDSAIRRRFEKRIYIPLPEEHARSFMFKLNLGTTPNSLTESDFMTL 322
Query: 369 FQDCDQSMLPNFSIL-KEKLSNPDIQEADRSQHFYKQL 405
+ D + SI+ ++ L P +++ + HF KQ+
Sbjct: 323 GKKTDGYSGADISIIVRDALMQP-VRKVQSATHF-KQV 358
>ZFIN|ZDB-GENE-030616-37 [details] [associations]
symbol:nsfa "N-ethylmaleimide-sensitive factor a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0014037 "Schwann
cell differentiation" evidence=IMP] [GO:0048932 "myelination of
posterior lateral line nerve axons" evidence=IMP] [GO:0048929
"efferent axon development in posterior lateral line nerve"
evidence=IMP] [GO:0048933 "afferent axon development in posterior
lateral line nerve" evidence=IMP] [GO:0014044 "Schwann cell
development" evidence=IMP] [GO:0048914 "myelination of anterior
lateral line nerve axons" evidence=IMP] [GO:0048592 "eye
morphogenesis" evidence=IMP] [GO:0048794 "swim bladder development"
evidence=IMP] [GO:0051875 "pigment granule localization"
evidence=IMP] [GO:0045162 "clustering of voltage-gated sodium
channels" evidence=IMP] [GO:0021854 "hypothalamus development"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-030616-37
GO:GO:0005524 GO:GO:0017111 GO:GO:0045162 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0014044 GO:GO:0021854
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0048592 HOVERGEN:HBG000324 HSSP:P18708 GO:GO:0048794
GO:GO:0048929 GO:GO:0048932 GO:GO:0048914 EMBL:BC050490
IPI:IPI00611897 UniGene:Dr.9155 ProteinModelPortal:Q7ZU50
SMR:Q7ZU50 STRING:Q7ZU50 PRIDE:Q7ZU50 ArrayExpress:Q7ZU50
Bgee:Q7ZU50 GO:GO:0048933 GO:GO:0051875 Uniprot:Q7ZU50
Length = 744
Score = 160 (61.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL GPPG GKT + + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLFGPPGCGKTLMARQIGKMLN----AREPKI----VNGPEILNKYVGESEANIRKLFA 307
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q+ + + L ++ DE++++ R S + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQKRLGANSGLHIIIFDELDAICKQRGTGASSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 366 NILVIGMTNRPDLIDEALMRPGRFEVKMEIGLPDEKGRVQIL 407
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 159 (61.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL GPPGTGKT L KA+A + + F S ++ + V LF+
Sbjct: 208 VLLVGPPGTGKTLLAKAIAGEAGVPFFS---------ISGSEFVEMFVGVGASRVRDLFK 258
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K +E N + IDE++++ R A + G + + +N LLT+MD + + +I
Sbjct: 259 KAKE-----NAPCLIFIDEIDAVGRQRGAGIGGGN-DEREQTLNQLLTEMDGFEGNTGII 312
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
I+ +N +D A + R D + V P R EIL
Sbjct: 313 IIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEIL 351
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 50/162 (30%), Positives = 84/162 (51%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VLL GPPG GKT L +A+A++ +L+ V+A +L E+ + V ++
Sbjct: 235 RGVLLAGPPGVGKTQLVRAVARETG---------AELLAVSAPALQGARPGETEENVRRI 285
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
F++ +E+ L+F +DEV++L R G + RVV +LT +D +
Sbjct: 286 FKRARELASRRPTLLF--LDEVDALCPRR----GGPHQAPESRVVAQVLTLLDGIGEDRE 339
Query: 315 VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 354
V+++ ++N A+D A R D + +G PTL+ R IL+
Sbjct: 340 VVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQ 381
Score = 136 (52.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 45/150 (30%), Positives = 77/150 (51%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
WE + +K +L L F + V L + VLL+GPPG KT+L +ALA
Sbjct: 465 WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQ-PKGVLLYGPPGCAKTTLVRALAT- 522
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
S R C V V+ LFS + +S K+++++F++ + N V +DE++
Sbjct: 523 -SCR-------CSFVSVSGADLFSPFVGDSEKILSQVFRQARA-----NTPAIVFLDEID 569
Query: 278 SLAAARKAALSGSEPSDSIRVVNALLTQMD 307
S+ +R ++S +E + RV++ LL ++D
Sbjct: 570 SILGSR--SISRTECNVQDRVLSVLLNELD 597
Score = 60 (26.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSC 356
NVI++ +N +D A + R D Y+ PP + R IL+ C
Sbjct: 635 NVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVC 679
>UNIPROTKB|F1SMW4 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033993 "response to lipid" evidence=IEA] [GO:0032510
"endosome to lysosome transport via multivesicular body sorting
pathway" evidence=IEA] [GO:0032367 "intracellular cholesterol
transport" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0006813 "potassium ion
transport" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005774
GO:GO:0005764 GO:GO:0016887 GO:GO:0032367 GO:GO:0010008
GO:GO:0005770 GO:GO:0006813 GO:GO:0033993 Pfam:PF04212
GO:GO:0007032 GO:GO:0005769 SMART:SM00745
GeneTree:ENSGT00550000074466 GO:GO:0032510 OMA:AKCAEYL
EMBL:CU694588 Ensembl:ENSSSCT00000005399 Uniprot:F1SMW4
Length = 369
Score = 155 (59.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 60/218 (27%), Positives = 101/218 (46%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + V++ L SKW ES KLV
Sbjct: 167 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSVSSSDLVSKWLGESEKLVK 217
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS 312
LFQ + EN + IDE++SL +R + SE + I+ + Q+ +
Sbjct: 218 NLFQ-----LARENKPSIIFIDEIDSLCGSRSE--NESEAARRIKTEFLVQMQVGVGVDN 270
Query: 313 PNVIILTTSNITAAIDIAFVD--RADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQ 370
+++L +NI +D A R + + Y+ P R + + L ++F
Sbjct: 271 DGILVLGATNIPWVLDSAIRRSLRFEKRIYIPLPEAHTRTAMFKLHLGTTQNNLTEADFW 330
Query: 371 DCDQSML----PNFSIL-KEKLSNPDIQEADRSQHFYK 403
D + + SI+ ++ L P +++ + HF K
Sbjct: 331 DLGKKTEGYSGADISIIVRDALMQP-VRKVQSATHFKK 367
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 53/188 (28%), Positives = 85/188 (45%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
+L GPPGTGKT L KA A + ++ F + VN + V LF
Sbjct: 345 ILTGPPGTGKTLLAKATAGEANVPF---------ITVNGSEFLEMFVGVGPARVRDLFA- 394
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
+ +N + IDE++++ R G + S+ +N LL +MD ++ NV+I
Sbjct: 395 ----LARKNAPCILFIDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVI 449
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIIS--NFQDCD 373
L +N +D A + R D + Y+GPP ++ R I + L+ L ++ N
Sbjct: 450 LAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKL 509
Query: 374 QSMLPNFS 381
S+ P FS
Sbjct: 510 ASLTPGFS 517
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 158 (60.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 171 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 222 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 274
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 275 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 43
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 158 (60.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 171 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 222 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 274
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 275 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 43
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 158 (60.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 171 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 222 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 274
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 275 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 43
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 158 (60.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 171 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 222 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 274
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 275 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 43
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 158 (60.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 171 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 222 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 274
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 275 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 43
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 158 (60.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 171 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 222 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 274
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 275 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 43
>DICTYBASE|DDB_G0284347 [details] [associations]
symbol:vps4 "MIT domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0005768 "endosome" evidence=IEA;ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0284347 GO:GO:0005524 GenomeReviews:CM000153_GR
GO:GO:0031902 GO:GO:0015031 GO:GO:0005768 GO:GO:0016197
Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
InterPro:IPR015415 Pfam:PF09336 EMBL:AAFI02000064 KO:K12196
OMA:AKCAEYL RefSeq:XP_638572.1 ProteinModelPortal:Q54PT2 SMR:Q54PT2
STRING:Q54PT2 EnsemblProtists:DDB0234037 GeneID:8624544
KEGG:ddi:DDB_G0284347 ProtClustDB:CLSZ2430261 Uniprot:Q54PT2
Length = 444
Score = 156 (60.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 52/198 (26%), Positives = 100/198 (50%)
Query: 214 LAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLI 273
LA+ ++ SS + ++ + +KW +S KLV +LF EM E+NN V + I
Sbjct: 184 LAKAVATEISSTF-----FSISPSDIVTKWLGDSEKLVKQLF----EMAREKNNSV-IFI 233
Query: 274 DEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKL-KSSPNVIILTTSNITAAIDIAFV 332
DEV+SL ++R + E + R+ L QM+ + S +++L +NI +D+A
Sbjct: 234 DEVDSLCSSR----NDQESESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWGLDLAIR 289
Query: 333 DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQ---DCDQSMLPNF--SILKEKL 387
R + + Y+G P QAR ++ + + T + ++++ D + + S++K+ +
Sbjct: 290 RRFEKRIYIGLPEPQARAKMFQIHIGSTPNTLVQADYKKLADLTEGYSGSDIGSLVKDAI 349
Query: 388 SNPDIQEADRSQHFYKQL 405
P ++ + HF KQ+
Sbjct: 350 MQP-VRAVQCATHF-KQI 365
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 49/129 (37%), Positives = 69/129 (53%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVS---WNRIVLLHGPPGTGKTSLCKAL 214
W+ + +GL Q Y A++F K F + W I LL+GPPGTGK+ L KA+
Sbjct: 134 WDDV---AGLYQAK-EYLKEAVIFPIKFPQMFTGNRKPWKGI-LLYGPPGTGKSYLAKAV 188
Query: 215 AQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLID 274
A ++S F S P + +KW +S KLV +LF EM E+NN V + ID
Sbjct: 189 ATEISSTFFSISPS---------DIVTKWLGDSEKLVKQLF----EMAREKNNSV-IFID 234
Query: 275 EVESLAAAR 283
EV+SL ++R
Sbjct: 235 EVDSLCSSR 243
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 158 (60.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 177 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 227
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 228 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 280
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 281 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 320
Score = 37 (18.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 12 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 49
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 158 (60.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 185 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 235
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 236 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 288
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 289 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 328
Score = 37 (18.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 20 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 57
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 158 (60.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 185 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 235
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 236 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 288
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 289 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 328
Score = 37 (18.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 20 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 57
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 158 (60.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L C ++V + S+ K+ ES +L+ ++F
Sbjct: 185 LLYGPPGTGKTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFNY 235
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD + V
Sbjct: 236 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 288
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K ++ P QAR +IL+
Sbjct: 289 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 328
Score = 37 (18.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAAS 177
D L + + +L KE DG + L LK+ Y S
Sbjct: 20 DKALQDYRKKLLEHKEIDGRLKEL--REQLKELTKQYEKS 57
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
F + G++P + ++L+GPPGTGKT +A+A + F + V L
Sbjct: 205 FVKLGIDP-----PKGIMLYGPPGTGKTLCARAVANRTDATF---------IRVIGSELV 250
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ E ++V +LF EM + + + DE++++ AR +G + ++ R +
Sbjct: 251 QKYVGEGARMVRELF----EMARTKKACI-IFFDEIDAIGGARFDDGAGGD-NEVQRTML 304
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
L+TQ+D N+ +L +N +D A + R D K G P L+ R ILR
Sbjct: 305 ELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILR 360
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 211 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 256
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 257 QKYLGDGPKLVRELFR-----VAEEHGPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 310
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 342
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 154 (59.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+L++GPPGTGKT L KA+A + + F + V K+ E ++V +F+
Sbjct: 175 ILIYGPPGTGKTMLVKAVANETQVTF---------IGVVGSEFVQKYLGEGPRMVRDVFR 225
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+ EN+ + IDEV+++A R A +G++ + R++ LL QMD S NV
Sbjct: 226 -----LARENSPSIIFIDEVDAIATKRFDAQTGAD-REVQRILLELLNQMDGFDKSTNVK 279
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQEL 360
++ +N +D A + R D K P + + I ++ + ++
Sbjct: 280 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKM 325
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 154 (59.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+L++GPPGTGKT L KA+A + + F + V K+ E ++V +F+
Sbjct: 175 ILIYGPPGTGKTMLVKAVANETQVTF---------IGVVGSEFVQKYLGEGPRMVRDVFR 225
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+ EN+ + IDEV+++A R A +G++ + R++ LL QMD S NV
Sbjct: 226 -----LARENSPSIIFIDEVDAIATKRFDAQTGAD-REVQRILLELLNQMDGFDKSTNVK 279
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQEL 360
++ +N +D A + R D K P + + I ++ + ++
Sbjct: 280 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKM 325
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 49/162 (30%), Positives = 85/162 (52%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VLL GPPG GKT L +A+A++ +L+ V+A +L E+ + V ++
Sbjct: 225 RGVLLAGPPGVGKTQLVRAVAREAG---------AELLAVSAPALQGARPGETEENVRRV 275
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
F + +E+ L+F +DEV++L R G+ + R V +LT +D ++ +
Sbjct: 276 FGRARELASRGPTLLF--LDEVDALCPRR----GGAHRAPESRAVAQVLTLLDGIRGDRD 329
Query: 315 VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 354
V+++ ++N A+D A R D + +G PTL+ R IL+
Sbjct: 330 VVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQ 371
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 68/244 (27%), Positives = 110/244 (45%)
Query: 140 QLSSFNEWI--LPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIV 197
Q SSF I + K D WE + +K +L L F + V L + V
Sbjct: 437 QPSSFRSVIGLMDIKPVD--WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQ-PKGV 493
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPG KT+L +ALA C V V+ LFS + +S K++++ QK
Sbjct: 494 LLYGPPGCAKTTLVRALATSC---------HCSFVSVSGADLFSPFVGDSEKVLSQ--QK 542
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDK--LKSSP-- 313
+ N V +DE++S+ +R ++S +E + RV++ LL ++D LK++
Sbjct: 543 VFRQARA-NTPAIVFLDEIDSILGSR--SISKTECNVQERVLSVLLNELDGVGLKTTERR 599
Query: 314 ---------------NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSC 356
NV+I+ +N +D A + R D Y+ PP + R IL+ C
Sbjct: 600 GSKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVC 659
Query: 357 LQEL 360
+ +
Sbjct: 660 TKNM 663
>TIGR_CMR|CHY_2164 [details] [associations]
symbol:CHY_2164 "ATPase, AAA family" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0019538 "protein metabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0464 GO:GO:0017111 RefSeq:YP_360978.1
ProteinModelPortal:Q3AA56 STRING:Q3AA56 GeneID:3726841
KEGG:chy:CHY_2164 PATRIC:21277395
BioCyc:CHYD246194:GJCN-2163-MONOMER Uniprot:Q3AA56
Length = 411
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 53/194 (27%), Positives = 91/194 (46%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
++L+GPPG GKT+ + +AQ + F VNA ++ S SG+LV +
Sbjct: 196 IILYGPPGNGKTNFARTVAQAYGLPF---------FVVNASAIIS-----SGQLVGAAEK 241
Query: 257 KIQEMVEEENNL--VFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
+ E+ L + DE++++A R+A S SD + +N LLTQMD + +
Sbjct: 242 TLLELFANAKALRPAIIFFDEIDAIAKKRRAETLNSA-SDIL--INILLTQMDGFEKVDD 298
Query: 315 VIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDC 372
V+++ +N +D A + R D K + P +AR + L + I GI + +
Sbjct: 299 VLLIAATNRIDILDEAILRPGRFDQKILIPNPDKEARKKYFDLFLGQKIEKGIDAELLEY 358
Query: 373 DQSMLPNFSILKEK 386
+ FS+ + K
Sbjct: 359 LANSTEGFSVAEIK 372
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 138 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 183
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 184 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 237
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 238 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 269
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 158 (60.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 49/162 (30%), Positives = 85/162 (52%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VLL GPPG GKT L +A+A++ +L+ V+A +L E+ + V ++
Sbjct: 269 RGVLLAGPPGVGKTQLVRAVAREAG---------AELLAVSAPALQGARPGETEENVRRV 319
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
F + +E+ L+F +DEV++L R G+ + R V +LT +D ++ +
Sbjct: 320 FGRARELASRGPTLLF--LDEVDALCPRR----GGAHRAPESRAVAQVLTLLDGIRGDRD 373
Query: 315 VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 354
V+++ ++N A+D A R D + +G PTL+ R IL+
Sbjct: 374 VVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQ 415
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 67/244 (27%), Positives = 112/244 (45%)
Query: 140 QLSSFNEWI--LPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIV 197
Q SSF I + K D WE + +K +L L F + V L + V
Sbjct: 481 QPSSFRSVIGLMDIKPVD--WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQ-PKGV 537
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPG KT+L +ALA C V V+ LFS + +S K+++++F++
Sbjct: 538 LLYGPPGCAKTTLVRALATSC---------HCSFVSVSGADLFSPFVGDSEKVLSQVFRQ 588
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDK--LKSSP-- 313
+ N V +DE++S+ +R ++S +E + RV++ LL ++D LK++
Sbjct: 589 ARA-----NTPAIVFLDEIDSILGSR--SISKTECNVQERVLSVLLNELDGVGLKTTERR 641
Query: 314 ---------------NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSC 356
NV+I+ +N +D A + R D Y+ PP + R IL+ C
Sbjct: 642 GSKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVC 701
Query: 357 LQEL 360
+ +
Sbjct: 702 TKNM 705
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 158 (60.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 49/172 (28%), Positives = 79/172 (45%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
+L GPPGTGKT L KA A + ++ F + VN + V +F
Sbjct: 337 MLTGPPGTGKTLLAKATAGEANVPF---------ITVNGSEFLEMFVGVGPARVRDMFA- 386
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
M + + + IDE++++ R G + S+ +N +L +MD SS NV++
Sbjct: 387 ---MARKHAPCI-LFIDEIDAIGRKRGRGHLGGQ-SEQENTLNQMLVEMDGFNSSTNVVV 441
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIIS 367
L +N +D A R D + Y+GPP ++ R I + L+ L G +S
Sbjct: 442 LAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLS 493
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 158 (60.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 53/186 (28%), Positives = 86/186 (46%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPG GKT L KA+A + + F + + VEV V LF++
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGP-EFVEVIG--------GLGAARVRSLFKE 396
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
+ V IDE++++ R +SG ++ + +N LL +MD + ++ +VI+
Sbjct: 397 ARARAP-----CIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIV 451
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQS 375
L ++N +D A + R D ++ PTLQ R EI L+ L T + +
Sbjct: 452 LASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAE 511
Query: 376 MLPNFS 381
+ P FS
Sbjct: 512 LTPGFS 517
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 158 (60.7 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 47/165 (28%), Positives = 78/165 (47%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
+L GPPGTGKT L KA A + ++ F + VN + V LF
Sbjct: 340 ILTGPPGTGKTLLAKATAGEANVPF---------ITVNGSEFLEMFVGVGPARVRDLF-- 388
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
++ +N + IDE++++ R G + S+ +N LL +MD ++ NV++
Sbjct: 389 ---VLARKNAPCILFIDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTATNVVV 444
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQEL 360
L +N +D A + R D + Y+GPP ++ R I + L+ L
Sbjct: 445 LAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPL 489
>UNIPROTKB|F1RRS3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:CU928092 Ensembl:ENSSSCT00000018852 Uniprot:F1RRS3
Length = 752
Score = 163 (62.4 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 45/162 (27%), Positives = 86/162 (53%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL+GPPG GKT L + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P + R +IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407
Score = 39 (18.8 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 198 LLHGPPGTGK 207
+L G PGTGK
Sbjct: 159 ILKGEPGTGK 168
>DICTYBASE|DDB_G0276153 [details] [associations]
symbol:nsfA "N-ethylmaleimide-sensitive fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006928
"cellular component movement" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276153 GO:GO:0005524 GO:GO:0016020
GO:GO:0046872 GO:GO:0015031 GO:GO:0006909 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0010008 GO:GO:0006935
GO:GO:0030659 HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 KO:K06027 OMA:MTSGQRV
EMBL:AF006826 RefSeq:XP_643273.1 ProteinModelPortal:Q75JI3
IntAct:Q75JI3 STRING:Q75JI3 EnsemblProtists:DDB0185052
GeneID:8620316 KEGG:ddi:DDB_G0276153 Uniprot:Q75JI3
Length = 738
Score = 157 (60.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 57/234 (24%), Positives = 115/234 (49%)
Query: 175 AASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEV 234
A S+ +F V V+ + +LL+GPPGTGKT + + + + L+ R P+ V
Sbjct: 238 AFSSRIFPPAIVKKLGVNHVKGMLLYGPPGTGKTLIARQIGKMLN----GREPKV----V 289
Query: 235 NAHSLFSKWFSESGKLVAKLFQ--KIQEMVE-EENNLVFVLIDEVESLAAARKAALSGSE 291
+ S+ +K+ +S + + LF+ +I++ + +++ L ++ DE++++ +R + S
Sbjct: 290 SGPSILNKYVGQSEENIRMLFRDAEIEQKAKGDDSGLHIIIFDELDAICKSRGSRQGDSG 349
Query: 292 PSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQAR 349
DS VVN LL +D ++S N++++ +N ID A + R ++ + P R
Sbjct: 350 VGDS--VVNQLLAMIDGVESLNNILVIGMTNRKDMIDEALLRPGRLEVHVEISLPDEHGR 407
Query: 350 YEILRSCLQELIRTGIISNFQDCDQSM-LPNFSILKEKLSNPDIQEADRSQHFY 402
+I + I T + + D+ + L N++ S +I+ +S Y
Sbjct: 408 EQIFK------IHTAKMRDQNALDKDVNLANYAHTTRNYSGAEIEGVVKSAASY 455
>ZFIN|ZDB-GENE-050808-1 [details] [associations]
symbol:nsfb "N-ethylmaleimide-sensitive factor b"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-050808-1 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
KO:K06027 HOVERGEN:HBG000324 EMBL:DQ022212 IPI:IPI00862410
RefSeq:NP_001019625.1 UniGene:Dr.94035 ProteinModelPortal:Q4U0S6
SMR:Q4U0S6 GeneID:554200 KEGG:dre:554200 CTD:554200
NextBio:20880726 Uniprot:Q4U0S6
Length = 747
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 44/162 (27%), Positives = 85/162 (52%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLF- 255
+LL GPPG GKT + + + + L+ +R P+ VN + +K+ ES + KLF
Sbjct: 256 ILLFGPPGCGKTLMARQIGKMLN----AREPKV----VNGPEILNKYVGESEANIRKLFA 307
Query: 256 --QKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
++ Q+ + + L ++ DE++++ R + + D+ VVN LL+++D ++
Sbjct: 308 DAEEEQKRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQLLSKIDGVEQLN 365
Query: 314 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 353
N++++ +N ID A + R ++K +G P R +IL
Sbjct: 366 NILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDETGRVQIL 407
>DICTYBASE|DDB_G0276169 [details] [associations]
symbol:DDB_G0276169 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006626 "protein targeting to mitochondrion" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276169 GO:GO:0005524 GO:GO:0006626
GO:GO:0005741 EMBL:AAFI02000014 GO:GO:0016887 eggNOG:COG0464
RefSeq:XP_001134596.1 ProteinModelPortal:Q1ZXK7
EnsemblProtists:DDB0233374 GeneID:8620390 KEGG:ddi:DDB_G0276169
InParanoid:Q1ZXK7 OMA:WYGETEK Uniprot:Q1ZXK7
Length = 330
Score = 151 (58.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 60/202 (29%), Positives = 98/202 (48%)
Query: 161 LIYESGLKQRLLHYAASALMFAEKGVN-PF---LVSWNRIVLLHGPPGTGKTSLCKALAQ 216
LI E LK+ + +A K N F L S + +LL+GPPGTGKT L KA++
Sbjct: 84 LIIED-LKETIFFPMQAASNLPNKAKNGSFHNDLFSVPKGILLYGPPGTGKTMLAKAISY 142
Query: 217 KLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEV 276
F LV N+ L SKW+ E+ K+V+ +F +++ + ++F IDE+
Sbjct: 143 HCGYNF--------LVIDNS-MLDSKWYGETEKMVSAMFSVAKKL---QPTIIF--IDEI 188
Query: 277 ESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRAD 336
+S+ + R+ S +E S+S + + + VI++ +N +ID AF+ R
Sbjct: 189 DSMVSTRED--SENETSNSKKSILLQHWDGFFSSGNDKVIVMGATNRPNSIDYAFLRRLP 246
Query: 337 IKAYVGPPTLQARYEILRSCLQ 358
+ V P R IL+ L+
Sbjct: 247 KRIKVDLPDKDQRKHILQIMLE 268
>GENEDB_PFALCIPARUM|PFC0140c [details] [associations]
symbol:PFC0140c "N-ethylmaleimide-sensitive
fusion protein, putative" species:5833 "Plasmodium falciparum"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 HSSP:Q01853
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 EMBL:AL844502 KO:K06027
HOGENOM:HOG000198544 PIR:T18421 RefSeq:XP_001351105.1
ProteinModelPortal:O77313 EnsemblProtists:PFC0140c:mRNA
GeneID:814347 KEGG:pfa:PFC0140c EuPathDB:PlasmoDB:PF3D7_0303000
OMA:ESAHECE ProtClustDB:CLSZ2432490 Uniprot:O77313
Length = 783
Score = 157 (60.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 49/193 (25%), Positives = 102/193 (52%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
++L+GPPGTGKT + + + + L+ +R P+ +N + +K+ +S + + LF+
Sbjct: 290 MILYGPPGTGKTLIARQIGKTLN----AREPKI----INGPEILNKYVGQSEENIRNLFK 341
Query: 257 KIQEMVEE--ENNLVFVLI-DEVESLAAAR-KAALSGSEPSDSIRVVNALLTQMDKLKSS 312
+ ++ EN+L+ ++I DE++++ R S + +DS VVN LL+++D + S
Sbjct: 342 DAEMEYKQSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDS--VVNQLLSKIDGVNSL 399
Query: 313 PNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQ 370
N++++ +N ID A + R ++ + P + R +IL + + + +S+
Sbjct: 400 NNILLIGMTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNIHTKNMRMSNKLSSDV 459
Query: 371 DCDQ--SMLPNFS 381
+ + PNFS
Sbjct: 460 NILELAERTPNFS 472
>UNIPROTKB|O77313 [details] [associations]
symbol:PFC0140c "N-ethylmaleimide sensitive fusion protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016887 HSSP:Q01853 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
EMBL:AL844502 KO:K06027 HOGENOM:HOG000198544 PIR:T18421
RefSeq:XP_001351105.1 ProteinModelPortal:O77313
EnsemblProtists:PFC0140c:mRNA GeneID:814347 KEGG:pfa:PFC0140c
EuPathDB:PlasmoDB:PF3D7_0303000 OMA:ESAHECE ProtClustDB:CLSZ2432490
Uniprot:O77313
Length = 783
Score = 157 (60.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 49/193 (25%), Positives = 102/193 (52%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
++L+GPPGTGKT + + + + L+ +R P+ +N + +K+ +S + + LF+
Sbjct: 290 MILYGPPGTGKTLIARQIGKTLN----AREPKI----INGPEILNKYVGQSEENIRNLFK 341
Query: 257 KIQEMVEE--ENNLVFVLI-DEVESLAAAR-KAALSGSEPSDSIRVVNALLTQMDKLKSS 312
+ ++ EN+L+ ++I DE++++ R S + +DS VVN LL+++D + S
Sbjct: 342 DAEMEYKQSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDS--VVNQLLSKIDGVNSL 399
Query: 313 PNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQ 370
N++++ +N ID A + R ++ + P + R +IL + + + +S+
Sbjct: 400 NNILLIGMTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNIHTKNMRMSNKLSSDV 459
Query: 371 DCDQ--SMLPNFS 381
+ + PNFS
Sbjct: 460 NILELAERTPNFS 472
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 154 (59.3 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 50/172 (29%), Positives = 88/172 (51%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPGTGKT L +A+A +L F ++V + ++ K+ ES +L+ ++F
Sbjct: 179 LLYGPPGTGKTLLARAVASQLDANF---------LKVVSSAIVDKYIGESARLIREMFNY 229
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNVI 316
++ + ++F+ DE++++ R + G+ I R + LL QMD S V
Sbjct: 230 ARD---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDSLGQVK 282
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
++ +N ++D A + R D K + P QAR EIL+ ++ + G I
Sbjct: 283 MIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEI 334
Score = 39 (18.8 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 29 VAGPPLPLLAEDKFLV 44
+ G L L EDKF+V
Sbjct: 64 IVGEVLKQLTEDKFIV 79
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 153 (58.9 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 209 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 254
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 255 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 308
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 309 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 340
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 153 (58.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 210 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 255
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 256 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 309
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 310 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 341
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 153 (58.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 211 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 256
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 257 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 310
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 342
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 153 (58.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 211 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 256
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 257 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 310
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 342
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 153 (58.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 211 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 256
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 257 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 310
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 342
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 153 (58.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 211 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 256
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 257 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 310
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 342
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 153 (58.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 211 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 256
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 257 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 310
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 342
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 153 (58.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 211 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 256
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 257 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAIGTKRYDSNSGGE-REIQRTML 310
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 342
>TAIR|locus:4010714050 [details] [associations]
symbol:AT5G52882 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 IPI:IPI00785844 RefSeq:NP_001078747.1
UniGene:At.23894 ProteinModelPortal:F4KHN5 SMR:F4KHN5 PRIDE:F4KHN5
EnsemblPlants:AT5G52882.1 GeneID:5008305 KEGG:ath:AT5G52882
OMA:LESERFY Uniprot:F4KHN5
Length = 829
Score = 156 (60.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 49/165 (29%), Positives = 79/165 (47%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R +LL GPPGTGKT L KA+A + F + V+ ++ SKWF E K V L
Sbjct: 552 RGILLFGPPGTGKTMLAKAIANEAGASF---------INVSMSTITSKWFGEDEKNVRAL 602
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
F ++ ++FV DEV+S+ R + E I+ K
Sbjct: 603 FTLAAKV---SPTIIFV--DEVDSMLGQR-TRVGEHEAMRKIKNEFMTHWDGLMTKPGER 656
Query: 315 VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQE 359
+++L +N +D A + R + + VG P++++R +ILR+ L +
Sbjct: 657 ILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREKILRTLLSK 701
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 152 (58.6 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
+ E G+ P + V+L+GPPGTGKT L KA+A + S F + V L
Sbjct: 210 YEEMGIKP-----PKGVILYGPPGTGKTLLAKAVANQTSATF---------LRVVGSELI 255
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ + KLV +LF+ V EE+ V IDE++++ R + SG E + R +
Sbjct: 256 QKYLGDGPKLVRELFR-----VAEEHAPSIVFIDEIDAVGTKRYDSNSGGE-REIQRTML 309
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV 332
LL Q+D S +V ++ +N +D A +
Sbjct: 310 ELLNQLDGFDSRGDVKVIMATNRIETLDPALI 341
>UNIPROTKB|E1BYT2 [details] [associations]
symbol:E1BYT2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0048471 GO:GO:0017111 GeneTree:ENSGT00550000074466
EMBL:AADN02046391 EMBL:AADN02054166 IPI:IPI00573772
Ensembl:ENSGALT00000038786 Uniprot:E1BYT2
Length = 170
Score = 130 (50.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 36/91 (39%), Positives = 54/91 (59%)
Query: 193 WNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVA 252
W R +LL GPPGTGK+ L KA+A + + +S + V++ L SKW ES KLV
Sbjct: 34 W-RGILLFGPPGTGKSYLAKAVATEAN---NSTF-----FSVSSSDLMSKWLGESEKLVK 84
Query: 253 KLFQKIQEMVEEENNLVFVLIDEVESLAAAR 283
LF+ ++ + +++F IDEV+SL +R
Sbjct: 85 NLFELARQ---HKPSIIF--IDEVDSLCGSR 110
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 155 (59.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 54/202 (26%), Positives = 92/202 (45%)
Query: 158 WESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQK 217
W+ + + +K R L A + ++ + F+ + LL+GPPG KT +A+A +
Sbjct: 482 WDDISGQESVK-RDLRLAVHFITRPKEEIQKFIRVPPKGFLLYGPPGCSKTMTAQAMATE 540
Query: 218 LSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVE 277
+ F + V L + + ES + + LF + + +++F DE++
Sbjct: 541 SGLNFFA---------VKGAELLNMYVGESERQIRDLFSRARAAAP---SMIF--FDEID 586
Query: 278 SLAAARKAALS---GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV-- 332
S+A +RK S G+ + V+ LL +MD + V +L +N A+D A +
Sbjct: 587 SIAGSRKGFGSDGGGATSQGGLNVLTTLLNEMDGFEDLRGVFVLAATNRPHALDPAIMRP 646
Query: 333 DRADIKAYVGPPTLQARYEILR 354
R D YV PP AR ILR
Sbjct: 647 GRFDEIIYVPPPDPAAREAILR 668
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 155 (59.6 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL GPPG GKT L KA+A + + F + + VEV V LF++
Sbjct: 319 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGS-EFVEVIG--------GLGAARVRSLFRE 369
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 317
Q V IDE++++ R +SG ++ + +N LL +MD + ++ +VI+
Sbjct: 370 AQARAP-----CIVYIDEIDAVGKKRSTNVSGFANAEEEQTLNQLLVEMDGMGTTDHVIV 424
Query: 318 LTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDCDQS 375
L ++N +D A + R D ++ PTLQ R EI L+ L S +
Sbjct: 425 LASTNRADVLDNALMRPGRLDRHIFIDLPTLQERREIFEQHLKGLKLIQDASFYSQHLAE 484
Query: 376 MLPNFS 381
+ P FS
Sbjct: 485 LTPGFS 490
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL GPPGTGKT L KA+A + + F S ++ + V LF+
Sbjct: 256 VLLVGPPGTGKTLLAKAIAGEAGVPFFS---------ISGSEFVEMFVGVGASRVRDLFK 306
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K +E N V +DE++++ R + G + + +N LLT+MD + + VI
Sbjct: 307 KAKE-----NAPCIVFVDEIDAVGRQRGTGIGGGN-DEREQTLNQLLTEMDGFEGNTGVI 360
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D + V P ++ R +IL+
Sbjct: 361 VVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILK 400
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL GPPGTGKT L KA+A + + F S ++ + V LF+
Sbjct: 263 VLLIGPPGTGKTLLAKAIAGEAGVPFFS---------ISGSEFVEMFVGVGASRVRDLFK 313
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K +E N V +DE++++ R + G + + +N LLT+MD + + VI
Sbjct: 314 KAKE-----NAPCIVFVDEIDAVGRQRGTGIGGGN-DEREQTLNQLLTEMDGFEGNTGVI 367
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D + V P ++ R +IL+
Sbjct: 368 VVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILK 407
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/173 (28%), Positives = 86/173 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A L + F ++V + ++ K+ ES +++ ++F
Sbjct: 169 VLLYGPPGTGKTLLARAVAASLGVNF---------LKVVSSAIVDKYIGESARIIREMFG 219
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNV 315
+E E ++F+ DE++++ R + G+ I R + LL QMD
Sbjct: 220 YAKE---HEPCVIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDYLGQT 272
Query: 316 IILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCLQELIRTGII 366
I+ +N +D A + R D K + P R EIL+ L+++ + G I
Sbjct: 273 KIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEI 325
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 152 (58.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 52/181 (28%), Positives = 89/181 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LLHGPPGTGKT L KA+A + S+ F S V L + + +S + V ++F
Sbjct: 741 LLLHGPPGTGKTLLAKAVATECSLTFLS---------VKGPELINMYVGQSEENVREVFA 791
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+ + + DE++SLA +R SG RVV+ LL ++D L S+ +V
Sbjct: 792 RARAAAP-----CIIFFDELDSLAPSR--GRSGDSGGVMDRVVSQLLAELDGLHSTQDVF 844
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQA-RYEILRSCLQEL-IRTGI-ISNFQD 371
++ +N +D A + R D +VG +A + +L + ++ + + ++N D
Sbjct: 845 VIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLD 904
Query: 372 C 372
C
Sbjct: 905 C 905
Score = 50 (22.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 19 DQDGIPEQKGVAGPPLPLLAEDKFLVSVEVCLKLSSTARIDDVRLAVE 66
D+DG+ E VA LL ++ L + +++T+R+ D+ V+
Sbjct: 538 DRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTDVQ 585
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/122 (30%), Positives = 67/122 (54%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + C + V+ L K+ E ++V +LF
Sbjct: 137 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFV 187
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+E +++F+ DE++S+ ++R SG + S+ R + LL Q+D +++ N+
Sbjct: 188 MAREHAP---SIIFM--DEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK 241
Query: 317 IL 318
++
Sbjct: 242 VM 243
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 67/244 (27%), Positives = 113/244 (46%)
Query: 140 QLSSFNEWI--LPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIV 197
Q SSF I + K D WE + +K +L L F + V L + V
Sbjct: 445 QPSSFRSVIGLMDIKPVD--WEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQ-PKGV 501
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQK 257
LL+GPPG KT+L +ALA C V V+ LFS + +S K+++++F++
Sbjct: 502 LLYGPPGCAKTTLVRALATSC---------HCSFVSVSGADLFSPFVGDSEKVLSQIFRQ 552
Query: 258 IQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKL-------- 309
+ ++F +DE++S+ AR A+ +G + + RV++ LL ++D +
Sbjct: 553 ARASTPA---ILF--LDEIDSILGARSASKTGCDVQE--RVLSVLLNELDGVGLKTIERR 605
Query: 310 --KSSP---------NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSC 356
KSS +V+I+ +N +D A + R D Y+ PP + R IL+ C
Sbjct: 606 GSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVC 665
Query: 357 LQEL 360
+ +
Sbjct: 666 TKTM 669
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 47/161 (29%), Positives = 77/161 (47%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VLL GPPG GKT L +A+A++ +L+ V+A +L E+ + V ++
Sbjct: 235 RGVLLAGPPGVGKTQLVRAVAREAG---------AELLAVSAPALQGSRPGETEENVRRV 285
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
FQ+ +E+ +L+F +DE+++L R GS +S V L
Sbjct: 286 FQRARELASRGPSLLF--LDEMDALCPQR-----GSRAPESRVVAQVLTLLDGASGDREV 338
Query: 315 VIILTTSNITAAID-IAFVDRADIKAYVGPPTLQARYEILR 354
V++ T+ A + R D + +G PTL+ R EIL+
Sbjct: 339 VVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQ 379
>POMBASE|SPAC328.04 [details] [associations]
symbol:SPAC328.04 "AAA family ATPase, unknown biological
role" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0033554 "cellular response to stress"
evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC328.04 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CU329670 GO:GO:0033554 GO:GO:0016887 eggNOG:COG0464
HSSP:O75351 OrthoDB:EOG44TSHD InterPro:IPR015415 Pfam:PF09336
EMBL:AB027998 RefSeq:NP_594206.1 ProteinModelPortal:Q9P3U2
SMR:Q9P3U2 EnsemblFungi:SPAC328.04.1 GeneID:2543208
KEGG:spo:SPAC328.04 NextBio:20804231 Uniprot:Q9P3U2
Length = 741
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 57/174 (32%), Positives = 86/174 (49%)
Query: 195 RIVLLHGPPGTGKTSLCKALA-QKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAK 253
R +LL GPPGTGKT L +A+A + S+ FS ++A SL SK+ ES KLV
Sbjct: 493 RGMLLFGPPGTGKTMLARAVATESRSVFFS----------ISASSLTSKFLGESEKLVRA 542
Query: 254 LFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSS- 312
LF +++ +++FV DE++SL +AR + G+E S R+ L Q L +
Sbjct: 543 LFTLAKKL---SPSIIFV--DEIDSLLSARSS--DGNEHETSRRIKTEFLIQWSSLARAA 595
Query: 313 --------PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
P V++L +N+ ID A R + Y+ P R L + L+
Sbjct: 596 ASRQTADHPRVLVLAATNLPWCIDDAARRRFVRRTYIPLPDETTRRLHLNNLLK 649
>UNIPROTKB|F6QV99 [details] [associations]
symbol:ATAD1 "ATPase family AAA domain-containing protein
1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISS] [GO:0007613 "memory" evidence=ISS]
[GO:0007612 "learning" evidence=ISS] [GO:0002092 "positive
regulation of receptor internalization" evidence=ISS] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0051967
GO:GO:0007613 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
GO:GO:0016887 GO:GO:0005778 GO:GO:0002092 EMBL:DAAA02058710
EMBL:BC151346 IPI:IPI00706878 RefSeq:NP_001192510.1 UniGene:Bt.8053
GeneID:506045 KEGG:bta:506045 CTD:84896 HOGENOM:HOG000225141
Uniprot:F6QV99
Length = 361
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG GKT + KA A++ RF + P +L KW+ ES KL A +F
Sbjct: 129 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPS---------TLTDKWYGESQKLAAAVFS 179
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNALLTQMDKLKSSPNV 315
++ + +++F IDE++S R + S E + ++ +L +D S V
Sbjct: 180 LA---IKLQPSIIF--IDEIDSFLRNRSS--SDHEATAMMKAQFMSLWDGLDT-DHSCQV 231
Query: 316 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
I++ +N +D A + R + ++ P L+ R IL+ L+
Sbjct: 232 IVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILK 274
>UNIPROTKB|Q8NBU5 [details] [associations]
symbol:ATAD1 "ATPase family AAA domain-containing protein
1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0002092 "positive regulation of
receptor internalization" evidence=ISS] [GO:0007612 "learning"
evidence=ISS] [GO:0007613 "memory" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045211 "postsynaptic membrane"
evidence=ISS] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0051967
GO:GO:0007613 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
EMBL:CH471066 GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464
GO:GO:0002092 CTD:84896 EMBL:AF361493 EMBL:AK027506 EMBL:AK075223
EMBL:AL133327 EMBL:AC022016 EMBL:BC010868 EMBL:BC063530
EMBL:BC073998 EMBL:AL834370 IPI:IPI00171445 IPI:IPI00929553
RefSeq:NP_116199.2 UniGene:Hs.435948 ProteinModelPortal:Q8NBU5
SMR:Q8NBU5 IntAct:Q8NBU5 STRING:Q8NBU5 PhosphoSite:Q8NBU5
DMDM:74762551 PaxDb:Q8NBU5 PeptideAtlas:Q8NBU5 PRIDE:Q8NBU5
Ensembl:ENST00000308448 Ensembl:ENST00000328142
Ensembl:ENST00000541004 GeneID:84896 KEGG:hsa:84896 UCSC:uc001key.1
GeneCards:GC10M089502 HGNC:HGNC:25903 HPA:HPA037569 MIM:614452
neXtProt:NX_Q8NBU5 PharmGKB:PA134914940 HOVERGEN:HBG057074
InParanoid:Q8NBU5 OMA:KNENXDR OrthoDB:EOG412M5T PhylomeDB:Q8NBU5
ChiTaRS:ATAD1 GenomeRNAi:84896 NextBio:75244 ArrayExpress:Q8NBU5
Bgee:Q8NBU5 CleanEx:HS_ATAD1 Genevestigator:Q8NBU5
GermOnline:ENSG00000138138 Uniprot:Q8NBU5
Length = 361
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG GKT + KA A++ RF + P +L KW+ ES KL A +F
Sbjct: 129 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPS---------TLTDKWYGESQKLAAAVFS 179
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNALLTQMDKLKSSPNV 315
++ + +++F IDE++S R + S E + ++ +L +D S V
Sbjct: 180 LA---IKLQPSIIF--IDEIDSFLRNRSS--SDHEATAMMKAQFMSLWDGLDT-DHSCQV 231
Query: 316 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
I++ +N +D A + R + ++ P L+ R IL+ L+
Sbjct: 232 IVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILK 274
>MGI|MGI:1915229 [details] [associations]
symbol:Atad1 "ATPase family, AAA domain containing 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0002092 "positive regulation of receptor
internalization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0007612 "learning"
evidence=IMP] [GO:0007613 "memory" evidence=IMP] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1915229 GO:GO:0005739 GO:GO:0005886 GO:GO:0005524
GO:GO:0051967 GO:GO:0007613 GO:GO:0030054 GO:GO:0045211
GO:GO:0007612 GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464
GO:GO:0002092 CTD:84896 HOGENOM:HOG000225141 HOVERGEN:HBG057074
OMA:KNENXDR OrthoDB:EOG412M5T ChiTaRS:ATAD1 EMBL:AK009419
EMBL:AK014967 EMBL:AK030719 EMBL:AK033639 EMBL:AK150469
EMBL:AK152059 EMBL:AK165953 EMBL:BC029085 EMBL:BC043051
IPI:IPI00108410 RefSeq:NP_080763.2 UniGene:Mm.27123
ProteinModelPortal:Q9D5T0 SMR:Q9D5T0 IntAct:Q9D5T0
PhosphoSite:Q9D5T0 PaxDb:Q9D5T0 PRIDE:Q9D5T0
Ensembl:ENSMUST00000070210 GeneID:67979 KEGG:mmu:67979
UCSC:uc008hfo.1 GeneTree:ENSGT00550000074823 InParanoid:Q9D5T0
NextBio:326122 Bgee:Q9D5T0 CleanEx:MM_ATAD1 Genevestigator:Q9D5T0
GermOnline:ENSMUSG00000013662 Uniprot:Q9D5T0
Length = 361
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG GKT + KA A++ RF + P +L KW+ ES KL A +F
Sbjct: 129 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPS---------TLTDKWYGESQKLAAAVFS 179
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNALLTQMDKLKSSPNV 315
++ + +++F IDE++S R + S E + ++ +L +D S V
Sbjct: 180 LA---IKLQPSIIF--IDEIDSFLRNRSS--SDHEATAMMKAQFMSLWDGLDT-DHSCQV 231
Query: 316 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
I++ +N +D A + R + ++ P L+ R IL+ L+
Sbjct: 232 IVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILK 274
>RGD|1308570 [details] [associations]
symbol:Atad1 "ATPase family, AAA domain containing 1"
species:10116 "Rattus norvegicus" [GO:0002092 "positive regulation
of receptor internalization" evidence=ISO;ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005778
"peroxisomal membrane" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0007612 "learning" evidence=ISO;ISS] [GO:0007613
"memory" evidence=ISO;ISS] [GO:0016887 "ATPase activity"
evidence=ISO;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=ISO;ISS] [GO:0051967 "negative
regulation of synaptic transmission, glutamatergic"
evidence=ISO;ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308570 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777 GO:GO:0051967
GO:GO:0007613 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
GO:GO:0016887 eggNOG:COG0464 GO:GO:0002092 CTD:84896
HOGENOM:HOG000225141 HOVERGEN:HBG057074 OMA:KNENXDR
GeneTree:ENSGT00550000074823 EMBL:BC094514 EMBL:EF688601
IPI:IPI00566676 RefSeq:NP_001030174.1 UniGene:Rn.54918
ProteinModelPortal:Q505J9 IntAct:Q505J9 PhosphoSite:Q505J9
PRIDE:Q505J9 Ensembl:ENSRNOT00000014684 GeneID:309532
KEGG:rno:309532 UCSC:RGD:1308570 NextBio:660942 ArrayExpress:Q505J9
Genevestigator:Q505J9 GermOnline:ENSRNOG00000010861 Uniprot:Q505J9
Length = 361
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG GKT + KA A++ RF + P +L KW+ ES KL A +F
Sbjct: 129 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPS---------TLTDKWYGESQKLAAAVFS 179
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNALLTQMDKLKSSPNV 315
++ + +++F IDE++S R + S E + ++ +L +D S V
Sbjct: 180 LA---IKLQPSIIF--IDEIDSFLRNRSS--SDHEATAMMKAQFMSLWDGLDT-DHSCQV 231
Query: 316 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
I++ +N +D A + R + ++ P L+ R IL+ L+
Sbjct: 232 IVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILK 274
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/148 (30%), Positives = 76/148 (51%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
F + G+ P + VLL+GPPG KT + KALA + + F + + L
Sbjct: 644 FTQMGIQP-----PKGVLLYGPPGCSKTMIAKALANESGLNF---------LAIKGPELM 689
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
+K+ ES + V ++F+K + + +++F DE+++LA R ++ +D RV+
Sbjct: 690 NKYVGESERAVREIFRKARAVAP---SIIF--FDELDALAVERGSSSGAGNVAD--RVLA 742
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAID 328
LLT+MD ++ NV IL +N ID
Sbjct: 743 QLLTEMDGIEQLKNVTILAATNRPDRID 770
Score = 139 (54.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 48/168 (28%), Positives = 82/168 (48%)
Query: 195 RIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKL 254
R VLL+GPPGTGKT + +A+A ++ S +N + SK++ E+ A+L
Sbjct: 379 RGVLLYGPPGTGKTMIARAVANEVGAYVSV---------INGPEIISKFYGETE---ARL 426
Query: 255 FQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPN 314
Q E +++F IDE+++L R+ A + E + + L+ + S
Sbjct: 427 RQIFAEATLRHPSIIF--IDELDALCPKREGAQNEVEKR-VVASLLTLMDGIGSEGSEGQ 483
Query: 315 VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILRSCLQEL 360
V++L +N A+D A R D + +G P Q R +IL+ L+ +
Sbjct: 484 VLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRV 531
>UNIPROTKB|F2Z5H2 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0002092 "positive
regulation of receptor internalization" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0051967 GO:GO:0007613
GO:GO:0045211 GO:GO:0007612 GO:GO:0016887 GO:GO:0005778
GO:GO:0002092 OMA:KNENXDR GeneTree:ENSGT00550000074823
EMBL:CT827875 Ensembl:ENSSSCT00000011423 Uniprot:F2Z5H2
Length = 365
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG GKT + KA A++ RF + P +L KW+ ES KL A +F
Sbjct: 133 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPS---------TLTDKWYGESQKLAAAVFS 183
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNALLTQMDKLKSSPNV 315
++ + +++F IDE++S R + S E + ++ +L +D S V
Sbjct: 184 LA---IKLQPSIIF--IDEIDSFLRNRSS--SDHEATAMMKAQFMSLWDGLDT-DHSCQV 235
Query: 316 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
I++ +N +D A + R + ++ P L+ R IL+ L+
Sbjct: 236 IVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILK 278
>UNIPROTKB|E2RHY1 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0007613 "memory" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0002092
"positive regulation of receptor internalization" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0051967
GO:GO:0007613 GO:GO:0045211 GO:GO:0007612 GO:GO:0016887
GO:GO:0005778 GO:GO:0002092 GeneTree:ENSGT00550000074823
EMBL:AAEX03014938 ProteinModelPortal:E2RHY1 PRIDE:E2RHY1
Ensembl:ENSCAFT00000024819 NextBio:20853036 Uniprot:E2RHY1
Length = 369
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG GKT + KA A++ RF + P +L KW+ ES KL A +F
Sbjct: 137 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPS---------TLTDKWYGESQKLAAAVFS 187
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNALLTQMDKLKSSPNV 315
++ + +++F IDE++S R + S E + ++ +L +D S V
Sbjct: 188 LA---IKLQPSIIF--IDEIDSFLRNRSS--SDHEATAMMKAQFMSLWDGLDT-DHSCQV 239
Query: 316 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
I++ +N +D A + R + ++ P L+ R IL+ L+
Sbjct: 240 IVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILK 282
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 53/188 (28%), Positives = 87/188 (46%)
Query: 180 MFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSL 239
+F G+ P + VLL+GPPGTGKT L KA+A + F + A ++
Sbjct: 197 LFTRVGIKP-----PKGVLLYGPPGTGKTLLAKAVAATIGANF---------IFSPASAI 242
Query: 240 FSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RV 298
K+ ES +L+ ++F +E E ++F+ DEV+++ R + G+ I R
Sbjct: 243 VDKYIGESARLIREMFAYAKE---HEPCIIFM--DEVDAIGGRRFS--EGTSADREIQRT 295
Query: 299 VNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSC 356
+ LL QMD + I+ +N +D A + R D K +G P R EI +
Sbjct: 296 LMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIH 355
Query: 357 LQELIRTG 364
++ + G
Sbjct: 356 TSKVAKQG 363
>FB|FBgn0027605 [details] [associations]
symbol:Vps4 "Vacuolar protein sorting 4" species:7227
"Drosophila melanogaster" [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IMP] [GO:0045197
"establishment or maintenance of epithelial cell apical/basal
polarity" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0006911 GO:GO:0030036
EMBL:AE014298 GO:GO:0006200 GO:GO:0016887 GO:GO:0044130
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
SMART:SM00745 GO:GO:0045197 GeneTree:ENSGT00550000074466
HSSP:Q9LCZ4 KO:K12196 OMA:FTGKRIP EMBL:AF145606 RefSeq:NP_573258.1
UniGene:Dm.3175 SMR:Q9Y162 IntAct:Q9Y162 MINT:MINT-919908
STRING:Q9Y162 EnsemblMetazoa:FBtr0074504 GeneID:32777
KEGG:dme:Dmel_CG6842 UCSC:CG6842-RA CTD:32777 FlyBase:FBgn0027605
InParanoid:Q9Y162 OrthoDB:EOG4K98TM ChiTaRS:Vps4 GenomeRNAi:32777
NextBio:780321 Uniprot:Q9Y162
Length = 442
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 46/159 (28%), Positives = 79/159 (49%)
Query: 191 VSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKL 250
+ W I LL GPPGTGK+ L KA+A + + + V++ L SKW ES KL
Sbjct: 163 IPWKGI-LLFGPPGTGKSYLAKAVATEAN--------RSTFFSVSSSDLMSKWLGESEKL 213
Query: 251 VAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK 310
V LF+ ++ + +++F IDE++S+ +AR + ++ I+ L+
Sbjct: 214 VKNLFELARQ---HKPSIIF--IDEIDSMCSARSD--NENDSVRRIKT-EFLVQMQGVGN 265
Query: 311 SSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQAR 349
+ +++L +NI +D A R + + Y+ P AR
Sbjct: 266 DTDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHAR 304
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/161 (28%), Positives = 81/161 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPGTGKT L +A+A + F ++V + ++ K+ ES +L+ ++F
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANF---------LKVVSSAIIDKYIGESARLIREMFN 226
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSI-RVVNALLTQMDKLKSSPNV 315
+E + ++F+ DE++++ R + G+ I R + LL Q+D V
Sbjct: 227 YARE---HQPCIIFM--DEIDAIGGRRFS--EGTSADREIQRTLMELLNQLDGFDQLGKV 279
Query: 316 IILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ +N +D A + R D K + P Q+R EIL+
Sbjct: 280 KMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK 320
>ZFIN|ZDB-GENE-030616-44 [details] [associations]
symbol:atad1b "ATPase family, AAA domain containing
1b" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-030616-44 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777
GO:GO:0030054 GO:GO:0045211 GO:GO:0006200 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000225141 HOVERGEN:HBG057074
OrthoDB:EOG412M5T GeneTree:ENSGT00550000074823 EMBL:BC095151
EMBL:AL731788 IPI:IPI00487088 RefSeq:NP_001019592.1
UniGene:Dr.78224 ProteinModelPortal:Q503W7 STRING:Q503W7
Ensembl:ENSDART00000079130 Ensembl:ENSDART00000140927 GeneID:368412
KEGG:dre:368412 CTD:368412 OMA:YQVGIAD NextBio:20812908 Bgee:Q503W7
Uniprot:Q503W7
Length = 362
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 47/163 (28%), Positives = 82/163 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG GKT + KA A++ RF + P +L KW+ ES KL A +F
Sbjct: 133 VLLYGPPGCGKTLIAKATAKEAGFRFINLQPS---------TLTDKWYGESQKLAAAVFS 183
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNALLTQMDKLKSSPNV 315
++ + +++F IDE++S R + S E + ++ +L +D + V
Sbjct: 184 LA---IKLQPSIIF--IDEIDSFLRNRSS--SDHEATAMMKAQFMSLWDGLDT-DYNCQV 235
Query: 316 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
II+ +N +D A + R + ++ P ++ R +IL+ L+
Sbjct: 236 IIMGATNRPQDLDSAILRRMPTRFHINQPNVRQRKDILKLILE 278
>ASPGD|ASPL0000064167 [details] [associations]
symbol:AN7047 species:162425 "Emericella nidulans"
[GO:0006626 "protein targeting to mitochondrion" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464
GO:GO:0017111 EMBL:AACD01000117 HOGENOM:HOG000225141
OrthoDB:EOG4BVW3J RefSeq:XP_664651.1 ProteinModelPortal:Q5AXD3
EnsemblFungi:CADANIAT00000424 GeneID:2870189 KEGG:ani:AN7047.2
OMA:HISTLTE Uniprot:Q5AXD3
Length = 410
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 58/211 (27%), Positives = 101/211 (47%)
Query: 152 KEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLC 211
K+ G+ E +I E LK+ +++ +F+ L++ VLL+GPPG GKT L
Sbjct: 104 KDIGGL-EDIIEE--LKESVIYPLTMPHLFSSTSS---LLTAPSGVLLYGPPGCGKTMLA 157
Query: 212 KALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFV 271
KALA + F + ++ +L KW+ +S KLV +F +++ + ++VF
Sbjct: 158 KALAHESGASF---------INLHISTLTEKWYGDSNKLVNAVFSLARKL---QPSIVF- 204
Query: 272 LIDEVESLAAARKAA---LSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAID 328
IDE++++ R++ SG ++ + + L T + L V++L +N ID
Sbjct: 205 -IDEIDAVLGTRRSGEHEASGMVKAEFMTHWDGL-TSANSLGEPQRVVVLGATNRMQDID 262
Query: 329 IAFVDRADIKAYVGPPTLQARYEILRSCLQE 359
A + R K V P R IL L++
Sbjct: 263 EAILRRMPKKFPVELPPAAQRLGILSLVLKD 293
>UNIPROTKB|F1NT80 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0002092
"positive regulation of receptor internalization" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0007612 "learning" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0051967 GO:GO:0045211
GO:GO:0016887 GO:GO:0005778 GO:GO:0002092 OMA:KNENXDR
GeneTree:ENSGT00550000074823 EMBL:AADN02035172 IPI:IPI00593427
Ensembl:ENSGALT00000005787 Uniprot:F1NT80
Length = 363
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 47/163 (28%), Positives = 82/163 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG GKT + KA A++ RF + P +L KW+ ES KL A +F
Sbjct: 130 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPS---------TLTDKWYGESQKLAAAVFS 180
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNALLTQMDKLKSSPNV 315
++ + +++F IDE++S +R + S E + ++ +L +D + V
Sbjct: 181 LA---IKLQPSIIF--IDEIDSFLRSRSS--SDHEATAMMKAQFMSLWDGLDT-DYNCQV 232
Query: 316 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
I++ +N +D A + R + ++ P L+ R IL+ L+
Sbjct: 233 IVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILK 275
>UNIPROTKB|F1PX89 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074823 OMA:YQVGIAD
EMBL:AAEX03014938 Ensembl:ENSCAFT00000035123 Uniprot:F1PX89
Length = 418
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VLL+GPPG GKT + KA A++ RF + P +L KW+ ES KL A +F
Sbjct: 186 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPS---------TLTDKWYGESQKLAAAVFS 236
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-VNALLTQMDKLKSSPNV 315
++ + +++F IDE++S R + S E + ++ +L +D S V
Sbjct: 237 LA---IKLQPSIIF--IDEIDSFLRNRSS--SDHEATAMMKAQFMSLWDGLDT-DHSCQV 288
Query: 316 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 358
I++ +N +D A + R + ++ P L+ R IL+ L+
Sbjct: 289 IVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILK 331
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 42/125 (33%), Positives = 69/125 (55%)
Query: 232 VEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSE 291
+ V LF K+ ES + V ++FQK ++ +++F DE+++L A R E
Sbjct: 611 IAVKGPELFDKFVGESERAVRQVFQKARQA---SPSVIF--FDEIDALTANR------GE 659
Query: 292 PSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQAR 349
+ S RVV ALL ++D +++ NV++L +N ID A + R D YVGPP +AR
Sbjct: 660 DNSSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEAR 719
Query: 350 YEILR 354
+I++
Sbjct: 720 KQIVK 724
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 55/224 (24%), Positives = 103/224 (45%)
Query: 138 DGQLSSFNEWILPAKEFDGMWESLIYES--GLKQRLLHYAASA-LMFAEKGVNPFL-VSW 193
D S++N+ + FDG ++ + S GL+ ++ L F + F +
Sbjct: 253 DRTQSAYNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMP 312
Query: 194 NRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAK 253
R VLL+GPPGTGKT + +A+A + + Q+ ++ S+ K+ E+ + K
Sbjct: 313 PRGVLLYGPPGTGKTMVMRAVAAEAN---------AQVFTIDGPSVVGKYLGETESRLRK 363
Query: 254 LFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSP 313
+F+ + + +++F IDE+++LA R +S +E S ++ + LL M
Sbjct: 364 IFEDARA---HQPSIIF--IDEIDALAPKRTEDVSEAE-SRAVATLLTLLDGMANA-GKV 416
Query: 314 NVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCL 357
VI T + + R + + +G P AR +I++ L
Sbjct: 417 VVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLL 460
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 50/176 (28%), Positives = 85/176 (48%)
Query: 181 FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF 240
F + G++P + VL +GPPGTGKT L +A+A +R C + V L
Sbjct: 194 FVKLGIDP-----PKGVLCYGPPGTGKTLLARAVA--------NRTDAC-FIRVIGSELV 239
Query: 241 SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 300
K+ E ++V +LFQ M + + V DEV+++ AR G + ++ R +
Sbjct: 240 QKYVGEGARMVRELFQ----MARSKKACI-VFFDEVDAIGGARFDDGVGGD-NEVQRTML 293
Query: 301 ALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
++ Q+D + N+ +L +N +D A + R D K G P L++R +I +
Sbjct: 294 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFK 349
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 52/186 (27%), Positives = 84/186 (45%)
Query: 169 QRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQ 228
++L L+ EK VN + + VL++GPPGTGKT +A+A + F
Sbjct: 180 EKLREVVEMPLLHPEKFVN-LGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAF------ 232
Query: 229 CQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALS 288
V V L K+ E ++V LFQ M + + + DEV+++ AR +
Sbjct: 233 ---VRVIGSELVQKYVGEGARMVRDLFQ----MARSKKACI-IFFDEVDAIGGARFDDGA 284
Query: 289 GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTL 346
G + ++ R + L+ Q+D N+ +L +N +D A + R D K G P L
Sbjct: 285 GGD-NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDL 343
Query: 347 QARYEI 352
+ R I
Sbjct: 344 EGRAHI 349
>TAIR|locus:2024522 [details] [associations]
symbol:DAA1 "DUO1-activated ATPase 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048235 "pollen sperm cell differentiation"
evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 GO:GO:0017111 GO:GO:0048235
IPI:IPI00517535 RefSeq:NP_849842.1 UniGene:At.16450
ProteinModelPortal:F4I5A3 SMR:F4I5A3 PRIDE:F4I5A3
EnsemblPlants:AT1G64110.2 GeneID:842716 KEGG:ath:AT1G64110
OMA:KANPIVL Uniprot:F4I5A3
Length = 829
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 56/210 (26%), Positives = 94/210 (44%)
Query: 148 ILPAKEFDGMWESLIYESGLKQRLLHYAASALMFAEKGVNPFLVSWNRIVLLHGPPGTGK 207
++PA+E + ++ + +K+ L L + L R +LL GPPGTGK
Sbjct: 510 VIPAEEINVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPC-RGILLFGPPGTGK 568
Query: 208 TSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENN 267
T L KA+A++ F + V+ ++ SKWF E K V LF ++
Sbjct: 569 TMLAKAIAKEAGASF---------INVSMSTITSKWFGEDEKNVRALFTLASKV---SPT 616
Query: 268 LVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAI 327
++FV DEV+S+ R + E I+ K +++L +N +
Sbjct: 617 IIFV--DEVDSMLGQR-TRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDL 673
Query: 328 DIAFVDRADIKAYVGPPTLQARYEILRSCL 357
D A + R + + VG P ++ R +ILR+ L
Sbjct: 674 DEAIIRRFERRIMVGLPAVENREKILRTLL 703
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 51/160 (31%), Positives = 76/160 (47%)
Query: 198 LLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESG-KLVAKLFQ 256
LL GPPGTGKT L +A+A + + F S C A S F + F G V LF+
Sbjct: 287 LLVGPPGTGKTLLARAVAGEAGVPFFS----C------AASEFVELFVGVGASRVRDLFE 336
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
K + V IDE++++ R A + G + + +N LLT+MD + VI
Sbjct: 337 KAKSKAP-----CIVFIDEIDAVGRQRGAGMGGGN-DEREQTINQLLTEMDGFSGNSGVI 390
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 354
+L +N +D A + R D + V P + R +IL+
Sbjct: 391 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILK 430
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 148 (57.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 47/148 (31%), Positives = 74/148 (50%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
+LLHGPPGTGKT L KA+A + S+ F S V L + + +S + V ++F
Sbjct: 330 LLLHGPPGTGKTLLAKAVATECSLTFLS---------VKGPELINMYVGQSEENVREVFA 380
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVI 316
+ + + DE++SLA +R SG RVV+ LL ++D L S+ +V
Sbjct: 381 RARAAAP-----CIIFFDELDSLAPSR--GRSGDSGGVMDRVVSQLLAELDGLHSTQDVF 433
Query: 317 ILTTSNITAAIDIAFV--DRADIKAYVG 342
++ +N +D A + R D +VG
Sbjct: 434 VIGATNRPDLLDPALLRPGRFDKLVFVG 461
Score = 45 (20.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 19 DQDGIPEQKGVAGPPLPLLAEDKFLVSVEVCLKLSSTARIDD----VRLAVERMLEKRSL 74
D+DG+ E V LL ++ L S + +++T+R D V+ A LE +L
Sbjct: 127 DRDGLGEDARVVAALRHLLLDEDPLNSCPPLMVVATTSRAQDLPADVQTAFPHELEVPAL 186
Query: 75 S 75
S
Sbjct: 187 S 187
>UNIPROTKB|F1S7T6 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
GO:GO:0008104 GO:GO:0005811 GO:GO:0030424 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0031122 GeneTree:ENSGT00550000074466
GO:GO:0051329 EMBL:CU915504 Ensembl:ENSSSCT00000004539 OMA:YHGESER
Uniprot:F1S7T6
Length = 263
Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 52/169 (30%), Positives = 83/169 (49%)
Query: 197 VLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQ 256
VL+ GPPGTGKT L KA+A + F + V++ +L SK+ ES KLV LF
Sbjct: 17 VLMVGPPGTGKTLLAKAVATECKTTFFN---------VSSSTLTSKYRGESEKLVRLLF- 66
Query: 257 KIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV-----VNALLTQMDKLKS 311
EM + + IDE++S+ + R+ E S ++ ++ + +
Sbjct: 67 ---EMARFYSPAT-IFIDEIDSICS-RRGTSEEHEASRRVKAELLVQMDGVGGASENDDP 121
Query: 312 SPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQEL 360
S V++L +N ID A R + + Y+ P+ + R E+LR L+EL
Sbjct: 122 SKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLREL 170
WARNING: HSPs involving 306 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 426 415 0.00081 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 556
No. of states in DFA: 620 (66 KB)
Total size of DFA: 265 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.91u 0.12s 35.03t Elapsed: 00:00:02
Total cpu time: 34.95u 0.13s 35.08t Elapsed: 00:00:02
Start: Fri May 10 17:19:25 2013 End: Fri May 10 17:19:27 2013
WARNINGS ISSUED: 2