Query 014377
Match_columns 426
No_of_seqs 262 out of 3512
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 10:29:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014377.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014377hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz2_A Digeranylgeranylglycero 100.0 2.7E-36 9.1E-41 289.5 30.0 342 7-367 2-366 (397)
2 3cgv_A Geranylgeranyl reductas 100.0 8.1E-36 2.8E-40 286.3 30.2 344 8-370 3-369 (397)
3 3atr_A Conserved archaeal prot 100.0 4.6E-34 1.6E-38 278.4 31.6 357 6-385 3-389 (453)
4 3rp8_A Flavoprotein monooxygen 100.0 2.2E-33 7.4E-38 270.2 27.9 304 7-331 21-354 (407)
5 2qa1_A PGAE, polyketide oxygen 100.0 1.6E-32 5.4E-37 269.7 29.2 308 3-331 5-333 (500)
6 2qa2_A CABE, polyketide oxygen 100.0 3.4E-32 1.2E-36 267.3 28.5 305 6-331 9-334 (499)
7 3ihg_A RDME; flavoenzyme, anth 100.0 2.5E-31 8.6E-36 264.5 26.3 308 7-331 3-357 (535)
8 3fmw_A Oxygenase; mithramycin, 100.0 5.9E-32 2E-36 269.0 21.1 303 8-331 48-378 (570)
9 3e1t_A Halogenase; flavoprotei 100.0 2.1E-31 7.1E-36 263.3 23.2 325 6-346 4-368 (512)
10 3nix_A Flavoprotein/dehydrogen 100.0 7.3E-31 2.5E-35 253.8 26.5 310 7-331 3-343 (421)
11 1pn0_A Phenol 2-monooxygenase; 100.0 1.2E-30 4.2E-35 264.1 28.6 306 8-331 7-407 (665)
12 2dkh_A 3-hydroxybenzoate hydro 100.0 3.3E-30 1.1E-34 260.6 24.5 304 8-330 31-397 (639)
13 2x3n_A Probable FAD-dependent 100.0 4.8E-31 1.6E-35 253.2 17.5 301 7-331 4-343 (399)
14 1k0i_A P-hydroxybenzoate hydro 100.0 4.6E-30 1.6E-34 246.0 22.3 303 9-330 2-333 (394)
15 4hb9_A Similarities with proba 100.0 2.2E-30 7.4E-35 249.7 19.3 315 10-330 2-367 (412)
16 2r0c_A REBC; flavin adenine di 100.0 1.4E-29 4.9E-34 251.8 25.4 300 7-330 24-364 (549)
17 3i3l_A Alkylhalidase CMLS; fla 100.0 2.8E-30 9.4E-35 257.3 19.6 323 6-344 20-378 (591)
18 2xdo_A TETX2 protein; tetracyc 100.0 2.8E-29 9.7E-34 240.7 24.4 309 6-330 23-368 (398)
19 3c96_A Flavin-containing monoo 100.0 5.1E-29 1.8E-33 239.8 24.5 305 7-331 2-356 (410)
20 2vou_A 2,6-dihydroxypyridine h 100.0 3.2E-29 1.1E-33 240.2 20.8 315 7-330 3-351 (397)
21 3alj_A 2-methyl-3-hydroxypyrid 100.0 7.1E-30 2.4E-34 243.3 15.3 299 7-330 9-333 (379)
22 2gmh_A Electron transfer flavo 100.0 6.9E-27 2.3E-31 233.6 26.6 310 8-333 34-410 (584)
23 2pyx_A Tryptophan halogenase; 100.0 3.1E-27 1E-31 234.2 22.7 313 7-344 5-412 (526)
24 2weu_A Tryptophan 5-halogenase 99.9 2.5E-26 8.7E-31 227.3 24.6 224 91-344 169-404 (511)
25 2aqj_A Tryptophan halogenase, 99.9 6.4E-26 2.2E-30 225.5 24.4 300 7-338 3-390 (538)
26 2e4g_A Tryptophan halogenase; 99.9 4.7E-26 1.6E-30 226.7 22.7 306 8-344 24-427 (550)
27 3c4a_A Probable tryptophan hyd 99.9 4.8E-26 1.6E-30 216.9 17.9 284 10-330 1-314 (381)
28 3ihm_A Styrene monooxygenase A 99.9 1.9E-21 6.4E-26 187.8 20.1 289 8-329 21-359 (430)
29 2bry_A NEDD9 interacting prote 99.8 4.3E-19 1.5E-23 174.0 18.5 136 7-157 90-237 (497)
30 1yvv_A Amine oxidase, flavin-c 99.8 9.4E-18 3.2E-22 156.7 22.3 278 9-315 2-329 (336)
31 1ryi_A Glycine oxidase; flavop 99.8 1.9E-18 6.6E-23 164.4 16.6 190 90-310 159-360 (382)
32 1y56_B Sarcosine oxidase; dehy 99.8 1.5E-17 5.2E-22 158.2 22.2 195 90-311 144-354 (382)
33 3nyc_A D-arginine dehydrogenas 99.8 5.7E-17 1.9E-21 154.1 20.3 194 90-310 149-356 (381)
34 2oln_A NIKD protein; flavoprot 99.7 6.9E-17 2.4E-21 154.5 18.3 82 91-174 149-232 (397)
35 2gag_B Heterotetrameric sarcos 99.7 6.9E-17 2.4E-21 154.8 17.6 193 90-311 169-374 (405)
36 3dme_A Conserved exported prot 99.7 6.1E-16 2.1E-20 146.2 22.9 201 91-310 146-368 (369)
37 3ps9_A TRNA 5-methylaminomethy 99.7 1.3E-15 4.6E-20 155.2 26.7 192 90-310 412-643 (676)
38 3pvc_A TRNA 5-methylaminomethy 99.7 6.8E-16 2.3E-20 157.5 24.2 191 91-310 408-647 (689)
39 2gf3_A MSOX, monomeric sarcosi 99.7 6E-16 2.1E-20 147.4 19.5 195 90-311 145-363 (389)
40 2qcu_A Aerobic glycerol-3-phos 99.7 4.5E-15 1.5E-19 146.0 25.9 206 90-313 144-373 (501)
41 3da1_A Glycerol-3-phosphate de 99.7 1.1E-15 3.7E-20 151.9 21.1 205 91-313 166-392 (561)
42 3dje_A Fructosyl amine: oxygen 99.6 1.5E-15 5E-20 147.2 15.4 62 90-151 156-222 (438)
43 2uzz_A N-methyl-L-tryptophan o 99.6 3.9E-15 1.3E-19 140.9 16.1 61 90-151 144-205 (372)
44 3c4n_A Uncharacterized protein 99.6 9.7E-15 3.3E-19 139.8 16.2 195 8-225 35-291 (405)
45 3v76_A Flavoprotein; structura 99.6 5.4E-15 1.8E-19 141.3 12.5 141 5-151 23-188 (417)
46 3axb_A Putative oxidoreductase 99.6 3.3E-14 1.1E-18 138.1 17.5 204 91-310 177-416 (448)
47 1c0p_A D-amino acid oxidase; a 99.6 1.3E-13 4.5E-18 130.0 18.5 268 6-313 3-358 (363)
48 4dgk_A Phytoene dehydrogenase; 99.5 6E-12 2E-16 123.9 29.3 61 95-155 221-283 (501)
49 2rgh_A Alpha-glycerophosphate 99.5 1.6E-12 5.5E-17 129.4 24.9 162 91-267 184-363 (571)
50 2cul_A Glucose-inhibited divis 99.5 6.8E-14 2.3E-18 123.1 13.3 127 8-155 2-130 (232)
51 2i0z_A NAD(FAD)-utilizing dehy 99.5 8.4E-14 2.9E-18 134.9 14.7 143 4-150 21-191 (447)
52 3i6d_A Protoporphyrinogen oxid 99.5 6.8E-13 2.3E-17 129.5 20.3 42 110-151 248-290 (470)
53 3kkj_A Amine oxidase, flavin-c 99.5 1.9E-12 6.3E-17 117.2 20.2 37 8-44 1-37 (336)
54 3nlc_A Uncharacterized protein 99.5 3.5E-13 1.2E-17 132.3 15.0 141 8-151 106-278 (549)
55 2gqf_A Hypothetical protein HI 99.5 1.5E-13 5.2E-18 130.8 12.0 139 7-151 2-169 (401)
56 1pj5_A N,N-dimethylglycine oxi 99.5 3.9E-12 1.3E-16 132.6 23.0 62 90-152 146-209 (830)
57 3ces_A MNMG, tRNA uridine 5-ca 99.5 4E-13 1.4E-17 132.9 14.5 145 8-155 27-186 (651)
58 3g3e_A D-amino-acid oxidase; F 99.5 2.4E-13 8.4E-18 127.5 11.5 190 90-315 137-336 (351)
59 2zxi_A TRNA uridine 5-carboxym 99.4 8.9E-13 3E-17 129.9 14.4 143 8-153 26-183 (637)
60 3cp8_A TRNA uridine 5-carboxym 99.4 8.3E-13 2.8E-17 130.6 14.2 143 7-152 19-176 (641)
61 4a9w_A Monooxygenase; baeyer-v 99.4 6.3E-13 2.1E-17 124.8 12.9 129 8-151 2-133 (357)
62 2ywl_A Thioredoxin reductase r 99.4 8.6E-13 2.9E-17 111.3 11.9 111 10-153 2-113 (180)
63 2zbw_A Thioredoxin reductase; 99.4 6.5E-13 2.2E-17 123.7 12.2 122 6-153 2-124 (335)
64 3ab1_A Ferredoxin--NADP reduct 99.4 9.6E-13 3.3E-17 123.9 12.6 123 6-154 11-135 (360)
65 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 3.9E-12 1.3E-16 118.8 15.1 131 10-149 2-164 (342)
66 1rp0_A ARA6, thiazole biosynth 99.4 4.4E-12 1.5E-16 115.1 14.8 128 8-154 38-195 (284)
67 3lov_A Protoporphyrinogen oxid 99.4 3.2E-11 1.1E-15 117.8 22.1 40 110-150 249-289 (475)
68 2gv8_A Monooxygenase; FMO, FAD 99.4 1.2E-12 4.2E-17 126.8 11.1 139 6-151 3-178 (447)
69 3nrn_A Uncharacterized protein 99.4 3.1E-11 1.1E-15 116.0 19.9 55 95-151 189-244 (421)
70 3jsk_A Cypbp37 protein; octame 99.4 4.8E-12 1.6E-16 116.0 12.9 129 8-155 78-256 (344)
71 3ka7_A Oxidoreductase; structu 99.4 1.5E-10 5.2E-15 111.3 24.2 57 95-152 196-254 (425)
72 3fbs_A Oxidoreductase; structu 99.4 5.1E-12 1.8E-16 115.4 13.0 112 9-152 2-114 (297)
73 3gwf_A Cyclohexanone monooxyge 99.4 3.9E-12 1.3E-16 125.6 12.9 128 7-151 6-148 (540)
74 3cty_A Thioredoxin reductase; 99.4 4.6E-12 1.6E-16 117.1 12.4 118 4-152 11-128 (319)
75 3f8d_A Thioredoxin reductase ( 99.3 7.1E-12 2.4E-16 115.8 13.3 115 7-152 13-127 (323)
76 2q0l_A TRXR, thioredoxin reduc 99.3 8.2E-12 2.8E-16 114.9 13.4 115 10-153 2-117 (311)
77 3lzw_A Ferredoxin--NADP reduct 99.3 3.6E-12 1.2E-16 118.4 9.8 116 8-150 6-123 (332)
78 2q7v_A Thioredoxin reductase; 99.3 1.1E-11 3.9E-16 114.8 12.5 118 6-152 5-125 (325)
79 1qo8_A Flavocytochrome C3 fuma 99.3 8.8E-12 3E-16 124.3 12.4 144 7-152 119-314 (566)
80 1w4x_A Phenylacetone monooxyge 99.3 1.6E-11 5.5E-16 121.7 13.9 137 7-152 14-156 (542)
81 4ap3_A Steroid monooxygenase; 99.3 9.1E-12 3.1E-16 123.2 11.9 135 7-150 19-159 (549)
82 3uox_A Otemo; baeyer-villiger 99.3 7.4E-12 2.5E-16 123.8 11.2 137 6-151 6-148 (545)
83 4fk1_A Putative thioredoxin re 99.3 1.9E-11 6.6E-16 112.1 12.6 114 6-151 3-118 (304)
84 1y0p_A Fumarate reductase flav 99.3 3.8E-11 1.3E-15 119.9 15.4 143 8-152 125-319 (571)
85 2gjc_A Thiazole biosynthetic e 99.3 1.1E-11 3.9E-16 112.9 10.4 135 8-154 64-243 (326)
86 4a5l_A Thioredoxin reductase; 99.3 1.3E-11 4.6E-16 113.6 10.8 121 6-150 1-121 (314)
87 3nks_A Protoporphyrinogen oxid 99.3 4.7E-11 1.6E-15 116.8 14.9 55 96-151 235-291 (477)
88 3itj_A Thioredoxin reductase 1 99.3 1.3E-11 4.5E-16 114.8 10.5 122 6-152 19-144 (338)
89 1vdc_A NTR, NADPH dependent th 99.3 3.2E-12 1.1E-16 118.9 6.0 121 7-153 6-127 (333)
90 3d1c_A Flavin-containing putat 99.3 8.1E-12 2.8E-16 117.9 8.6 136 8-151 3-144 (369)
91 3k7m_X 6-hydroxy-L-nicotine ox 99.3 5.3E-10 1.8E-14 107.8 21.4 42 107-149 216-258 (431)
92 2ivd_A PPO, PPOX, protoporphyr 99.2 1.8E-10 6E-15 112.7 17.2 39 6-44 13-51 (478)
93 2a87_A TRXR, TR, thioredoxin r 99.2 5E-11 1.7E-15 110.9 12.4 116 6-152 11-128 (335)
94 1fl2_A Alkyl hydroperoxide red 99.2 4.3E-11 1.5E-15 110.0 10.9 113 9-152 1-117 (310)
95 3s5w_A L-ornithine 5-monooxyge 99.2 9.3E-12 3.2E-16 121.3 6.5 143 8-152 29-194 (463)
96 1trb_A Thioredoxin reductase; 99.2 4E-11 1.4E-15 110.8 10.2 116 7-152 3-118 (320)
97 2xve_A Flavin-containing monoo 99.2 6.9E-11 2.3E-15 114.8 11.9 137 10-152 3-168 (464)
98 2vvm_A Monoamine oxidase N; FA 99.2 1E-08 3.5E-13 100.6 27.4 56 96-151 256-313 (495)
99 4at0_A 3-ketosteroid-delta4-5a 99.2 1.5E-10 5.1E-15 113.9 12.5 56 96-151 203-265 (510)
100 1hyu_A AHPF, alkyl hydroperoxi 99.2 1.5E-10 5.1E-15 114.1 12.0 114 7-151 210-327 (521)
101 4gcm_A TRXR, thioredoxin reduc 99.1 2.6E-10 9E-15 104.9 11.6 112 8-151 5-117 (312)
102 1s3e_A Amine oxidase [flavin-c 99.1 4.5E-09 1.5E-13 103.8 20.6 43 109-151 226-269 (520)
103 1chu_A Protein (L-aspartate ox 99.1 2.4E-10 8.4E-15 112.8 11.2 146 7-153 6-211 (540)
104 2a8x_A Dihydrolipoyl dehydroge 99.1 1.2E-10 4.2E-15 113.3 8.2 135 9-152 3-148 (464)
105 1d4d_A Flavocytochrome C fumar 99.1 1.8E-09 6.3E-14 107.5 16.7 143 8-152 125-319 (572)
106 1kf6_A Fumarate reductase flav 99.1 3.7E-10 1.3E-14 112.9 11.6 147 8-155 4-202 (602)
107 2wdq_A Succinate dehydrogenase 99.1 6.4E-10 2.2E-14 110.9 11.4 59 94-152 142-208 (588)
108 2e5v_A L-aspartate oxidase; ar 99.1 8.9E-10 3.1E-14 107.1 12.1 143 11-155 1-181 (472)
109 1ojt_A Surface protein; redox- 99.0 1.3E-10 4.5E-15 113.6 5.0 138 6-152 3-162 (482)
110 3lxd_A FAD-dependent pyridine 99.0 1.4E-09 4.8E-14 104.2 11.9 59 94-152 193-253 (415)
111 2h88_A Succinate dehydrogenase 99.0 1.3E-09 4.3E-14 109.0 11.6 59 94-152 154-219 (621)
112 1v59_A Dihydrolipoamide dehydr 99.0 3.2E-10 1.1E-14 110.8 6.8 135 7-150 3-157 (478)
113 3l8k_A Dihydrolipoyl dehydroge 99.0 8.7E-10 3E-14 107.3 9.5 129 7-150 2-144 (466)
114 3r9u_A Thioredoxin reductase; 99.0 2.8E-09 9.6E-14 97.9 12.2 113 8-151 3-119 (315)
115 2bs2_A Quinol-fumarate reducta 99.0 2.1E-09 7.3E-14 108.1 12.0 59 94-152 157-222 (660)
116 1q1r_A Putidaredoxin reductase 99.0 1.4E-09 4.9E-14 104.6 10.1 111 8-152 3-116 (431)
117 3klj_A NAD(FAD)-dependent dehy 99.0 1.2E-09 4.2E-14 103.2 8.7 115 1-150 1-116 (385)
118 3sx6_A Sulfide-quinone reducta 98.9 4.1E-10 1.4E-14 108.7 4.9 108 9-152 4-114 (437)
119 1ebd_A E3BD, dihydrolipoamide 98.9 9E-10 3.1E-14 106.9 7.0 136 8-152 2-147 (455)
120 1dxl_A Dihydrolipoamide dehydr 98.9 1.8E-09 6E-14 105.3 9.0 139 7-153 4-154 (470)
121 4gde_A UDP-galactopyranose mut 98.9 1.8E-09 6E-14 106.5 8.2 53 95-149 222-275 (513)
122 3urh_A Dihydrolipoyl dehydroge 98.9 3.3E-09 1.1E-13 103.9 9.2 136 7-149 23-169 (491)
123 1zmd_A Dihydrolipoyl dehydroge 98.9 6.6E-09 2.3E-13 101.3 11.2 135 7-152 4-154 (474)
124 2hqm_A GR, grase, glutathione 98.9 3E-09 1E-13 103.8 8.5 139 7-151 9-161 (479)
125 3qfa_A Thioredoxin reductase 1 98.9 3E-09 1E-13 104.8 8.4 138 6-151 29-186 (519)
126 4b63_A L-ornithine N5 monooxyg 98.8 8.1E-09 2.8E-13 101.1 10.3 145 8-152 38-216 (501)
127 2bc0_A NADH oxidase; flavoprot 98.8 1.1E-08 3.8E-13 100.0 10.8 112 8-151 34-150 (490)
128 2qae_A Lipoamide, dihydrolipoy 98.8 1.4E-08 4.9E-13 98.7 11.5 137 9-151 2-149 (468)
129 3oc4_A Oxidoreductase, pyridin 98.8 6.5E-09 2.2E-13 100.7 8.8 111 10-152 3-117 (452)
130 3cgb_A Pyridine nucleotide-dis 98.8 1.7E-08 5.9E-13 98.4 11.8 111 9-151 36-153 (480)
131 1zk7_A HGII, reductase, mercur 98.8 2E-08 6.9E-13 97.7 12.1 138 7-151 2-151 (467)
132 2cdu_A NADPH oxidase; flavoenz 98.8 3.2E-09 1.1E-13 102.8 6.4 112 10-151 1-118 (452)
133 3gyx_A Adenylylsulfate reducta 98.8 9.8E-09 3.3E-13 103.3 10.0 60 93-152 164-235 (662)
134 3p1w_A Rabgdi protein; GDI RAB 98.8 2.3E-08 7.7E-13 96.2 12.0 55 95-149 256-313 (475)
135 1jnr_A Adenylylsulfate reducta 98.8 1.4E-08 4.8E-13 102.4 11.1 144 8-152 21-220 (643)
136 3lad_A Dihydrolipoamide dehydr 98.8 2.5E-09 8.5E-14 104.4 4.8 136 8-150 2-154 (476)
137 3o0h_A Glutathione reductase; 98.8 2.3E-09 7.8E-14 104.8 4.4 134 8-151 25-167 (484)
138 3dk9_A Grase, GR, glutathione 98.8 1.8E-09 6.2E-14 105.4 3.7 136 7-151 18-161 (478)
139 2v3a_A Rubredoxin reductase; a 98.8 2.8E-08 9.6E-13 94.1 11.7 100 9-152 145-245 (384)
140 3ics_A Coenzyme A-disulfide re 98.8 1.8E-08 6E-13 101.0 10.5 114 7-151 34-153 (588)
141 3iwa_A FAD-dependent pyridine 98.8 1E-08 3.5E-13 99.9 8.6 118 9-151 3-126 (472)
142 4dna_A Probable glutathione re 98.8 2.8E-09 9.7E-14 103.6 4.1 134 8-151 4-146 (463)
143 3h8l_A NADH oxidase; membrane 98.8 5.6E-09 1.9E-13 99.8 5.9 108 10-151 2-114 (409)
144 3dgh_A TRXR-1, thioredoxin red 98.8 1.2E-08 4.2E-13 99.6 8.4 41 1-41 1-41 (483)
145 2yg5_A Putrescine oxidase; oxi 98.8 3.3E-08 1.1E-12 95.8 11.3 38 7-44 3-40 (453)
146 3h28_A Sulfide-quinone reducta 98.8 2.3E-09 7.9E-14 103.2 2.8 106 10-151 3-110 (430)
147 3g5s_A Methylenetetrahydrofola 98.8 1.3E-08 4.4E-13 93.8 7.5 113 10-150 2-137 (443)
148 2r9z_A Glutathione amide reduc 98.7 4.9E-09 1.7E-13 101.8 4.9 35 8-42 3-37 (463)
149 2yqu_A 2-oxoglutarate dehydrog 98.7 8.5E-09 2.9E-13 100.0 6.6 133 9-151 1-142 (455)
150 1xdi_A RV3303C-LPDA; reductase 98.7 9.6E-09 3.3E-13 100.8 7.1 138 9-151 2-157 (499)
151 2eq6_A Pyruvate dehydrogenase 98.7 1.8E-08 6.2E-13 97.8 8.5 34 9-42 6-39 (464)
152 2gqw_A Ferredoxin reductase; f 98.7 2.5E-08 8.4E-13 95.2 9.3 108 7-152 5-115 (408)
153 1d5t_A Guanine nucleotide diss 98.7 4.5E-08 1.5E-12 94.1 11.1 56 96-151 235-291 (433)
154 2eq6_A Pyruvate dehydrogenase 98.7 8.9E-08 3E-12 93.0 13.1 98 10-152 170-273 (464)
155 1ges_A Glutathione reductase; 98.7 1.4E-08 4.8E-13 98.2 7.3 36 7-42 2-37 (450)
156 3kd9_A Coenzyme A disulfide re 98.7 3E-08 1E-12 95.9 9.5 107 9-150 3-114 (449)
157 1nhp_A NADH peroxidase; oxidor 98.7 1E-08 3.6E-13 99.1 6.2 110 10-151 1-116 (447)
158 2yqu_A 2-oxoglutarate dehydrog 98.7 6.8E-08 2.3E-12 93.6 11.7 98 10-152 168-266 (455)
159 2v3a_A Rubredoxin reductase; a 98.7 1.1E-08 3.9E-13 96.8 6.0 109 7-151 2-114 (384)
160 4b1b_A TRXR, thioredoxin reduc 98.7 1.4E-07 4.7E-12 92.8 13.4 59 95-153 263-322 (542)
161 3ic9_A Dihydrolipoamide dehydr 98.7 6.1E-09 2.1E-13 101.9 3.5 35 8-42 7-41 (492)
162 1xhc_A NADH oxidase /nitrite r 98.7 3.8E-08 1.3E-12 92.5 8.6 105 9-150 8-113 (367)
163 4gut_A Lysine-specific histone 98.7 1.1E-07 3.7E-12 97.3 12.5 42 108-149 542-584 (776)
164 3dgz_A Thioredoxin reductase 2 98.7 1.1E-08 3.8E-13 100.1 5.0 138 7-151 4-160 (488)
165 3ef6_A Toluene 1,2-dioxygenase 98.7 8.6E-08 2.9E-12 91.5 10.9 107 10-151 3-112 (410)
166 1m6i_A Programmed cell death p 98.7 4.5E-08 1.5E-12 95.7 8.5 131 6-151 8-145 (493)
167 3ntd_A FAD-dependent pyridine 98.6 2.5E-08 8.6E-13 99.5 6.7 111 10-151 2-118 (565)
168 1y56_A Hypothetical protein PH 98.6 4.1E-08 1.4E-12 96.0 8.0 110 8-151 107-220 (493)
169 3hyw_A Sulfide-quinone reducta 98.6 7.6E-09 2.6E-13 99.5 2.6 103 11-149 4-108 (430)
170 1fec_A Trypanothione reductase 98.6 2.1E-08 7.1E-13 98.1 5.5 33 8-40 2-35 (490)
171 1mo9_A ORF3; nucleotide bindin 98.6 7.4E-08 2.5E-12 95.0 9.4 39 5-43 39-77 (523)
172 1onf_A GR, grase, glutathione 98.6 2E-08 6.9E-13 98.4 5.1 34 9-42 2-35 (500)
173 3fg2_P Putative rubredoxin red 98.6 4.3E-08 1.5E-12 93.4 7.2 107 10-150 2-110 (404)
174 1ges_A Glutathione reductase; 98.6 1.6E-07 5.5E-12 90.7 10.8 98 10-152 168-267 (450)
175 3vrd_B FCCB subunit, flavocyto 98.6 1.3E-07 4.4E-12 90.1 9.8 104 11-151 4-109 (401)
176 4g6h_A Rotenone-insensitive NA 98.6 4.4E-08 1.5E-12 95.8 6.5 116 4-151 37-170 (502)
177 2wpf_A Trypanothione reductase 98.6 1.7E-08 5.8E-13 98.8 3.0 35 6-40 4-39 (495)
178 1v59_A Dihydrolipoamide dehydr 98.6 4.3E-07 1.5E-11 88.5 12.3 98 10-152 184-289 (478)
179 1ebd_A E3BD, dihydrolipoamide 98.6 3.6E-07 1.2E-11 88.5 11.6 98 9-151 170-271 (455)
180 2r9z_A Glutathione amide reduc 98.5 3.7E-07 1.3E-11 88.5 11.7 98 10-152 167-266 (463)
181 3k30_A Histamine dehydrogenase 98.5 2E-07 7E-12 94.9 9.6 38 7-44 389-426 (690)
182 3fg2_P Putative rubredoxin red 98.5 5.5E-07 1.9E-11 85.8 11.9 98 10-151 143-242 (404)
183 1nhp_A NADH peroxidase; oxidor 98.5 3.5E-07 1.2E-11 88.4 10.3 99 8-151 148-247 (447)
184 1b37_A Protein (polyamine oxid 98.5 1E-06 3.4E-11 85.8 13.6 42 109-150 228-270 (472)
185 1lvl_A Dihydrolipoamide dehydr 98.5 1.9E-07 6.4E-12 90.5 8.2 34 8-41 4-37 (458)
186 3o0h_A Glutathione reductase; 98.5 5.8E-07 2E-11 87.7 11.4 99 9-152 191-290 (484)
187 3ef6_A Toluene 1,2-dioxygenase 98.5 2.5E-07 8.6E-12 88.3 8.6 99 9-151 143-242 (410)
188 2bcg_G Secretory pathway GDP d 98.5 1.2E-07 4.1E-12 91.7 6.2 55 96-151 243-301 (453)
189 3fpz_A Thiazole biosynthetic e 98.5 1E-07 3.4E-12 88.1 5.2 39 8-46 64-104 (326)
190 2x8g_A Thioredoxin glutathione 98.5 2.3E-07 8E-12 93.0 8.1 35 7-41 105-139 (598)
191 2gag_A Heterotetrameric sarcos 98.4 6.6E-07 2.3E-11 94.3 10.8 111 8-151 127-254 (965)
192 1zmd_A Dihydrolipoyl dehydroge 98.4 1.4E-06 4.7E-11 84.9 12.2 98 10-151 179-283 (474)
193 1mo9_A ORF3; nucleotide bindin 98.4 1.1E-06 3.8E-11 86.5 11.6 98 10-152 215-318 (523)
194 1q1r_A Putidaredoxin reductase 98.4 8.6E-07 3E-11 85.1 10.6 99 9-151 149-251 (431)
195 4eqs_A Coenzyme A disulfide re 98.4 3.4E-07 1.2E-11 88.1 7.6 110 11-151 2-117 (437)
196 3iwa_A FAD-dependent pyridine 98.4 1.1E-06 3.7E-11 85.5 11.0 99 9-151 159-259 (472)
197 1xdi_A RV3303C-LPDA; reductase 98.4 1.4E-06 4.8E-11 85.3 11.7 98 10-152 183-281 (499)
198 2qae_A Lipoamide, dihydrolipoy 98.4 1.5E-06 5E-11 84.5 11.6 98 10-152 175-278 (468)
199 3urh_A Dihydrolipoyl dehydroge 98.4 2.6E-06 8.7E-11 83.3 13.2 98 10-152 199-302 (491)
200 1ojt_A Surface protein; redox- 98.4 9.7E-07 3.3E-11 86.1 10.2 99 9-152 185-288 (482)
201 2gqw_A Ferredoxin reductase; f 98.4 1.4E-06 4.8E-11 83.0 10.9 95 9-151 145-240 (408)
202 1fec_A Trypanothione reductase 98.4 1.3E-06 4.6E-11 85.2 10.7 98 10-152 188-290 (490)
203 1dxl_A Dihydrolipoamide dehydr 98.4 1.2E-06 4.1E-11 85.2 9.8 97 10-151 178-280 (470)
204 2hqm_A GR, grase, glutathione 98.4 1.4E-06 4.8E-11 84.8 10.1 98 10-152 186-287 (479)
205 2cdu_A NADPH oxidase; flavoenz 98.3 2.6E-06 9E-11 82.3 11.9 99 10-152 150-249 (452)
206 1zk7_A HGII, reductase, mercur 98.3 3.2E-06 1.1E-10 82.1 12.4 96 10-152 177-273 (467)
207 3oc4_A Oxidoreductase, pyridin 98.3 3.3E-06 1.1E-10 81.6 12.2 98 10-152 148-246 (452)
208 1lvl_A Dihydrolipoamide dehydr 98.3 1.1E-06 3.7E-11 85.1 8.7 96 10-152 172-270 (458)
209 3cgb_A Pyridine nucleotide-dis 98.3 2.6E-06 9E-11 82.9 11.2 97 9-151 186-283 (480)
210 1onf_A GR, grase, glutathione 98.3 3.2E-06 1.1E-10 82.7 11.8 99 9-152 176-277 (500)
211 3ntd_A FAD-dependent pyridine 98.3 2.7E-06 9.2E-11 84.7 11.3 97 10-151 152-268 (565)
212 1trb_A Thioredoxin reductase; 98.3 5.1E-06 1.7E-10 76.2 12.2 94 10-150 146-247 (320)
213 1m6i_A Programmed cell death p 98.3 3.3E-06 1.1E-10 82.5 11.3 98 10-151 181-283 (493)
214 2wpf_A Trypanothione reductase 98.3 2.9E-06 9.8E-11 82.9 10.9 98 10-152 192-294 (495)
215 1v0j_A UDP-galactopyranose mut 98.3 5.6E-07 1.9E-11 85.5 5.6 39 6-44 4-43 (399)
216 3ic9_A Dihydrolipoamide dehydr 98.3 5E-06 1.7E-10 81.2 12.4 98 9-152 174-276 (492)
217 2b9w_A Putative aminooxidase; 98.3 8.3E-07 2.8E-11 85.1 6.2 38 7-44 4-42 (424)
218 2a8x_A Dihydrolipoyl dehydroge 98.3 3.8E-06 1.3E-10 81.5 11.0 97 10-151 172-272 (464)
219 2bc0_A NADH oxidase; flavoprot 98.2 3.6E-06 1.2E-10 82.2 10.0 97 9-151 194-292 (490)
220 3hdq_A UDP-galactopyranose mut 98.2 1.1E-06 3.7E-11 82.8 5.7 38 7-44 27-64 (397)
221 2e1m_A L-glutamate oxidase; L- 98.2 1.2E-06 4.2E-11 81.7 5.9 39 6-44 41-80 (376)
222 1rsg_A FMS1 protein; FAD bindi 98.2 8.4E-07 2.9E-11 87.3 4.8 38 7-44 6-44 (516)
223 1xhc_A NADH oxidase /nitrite r 98.2 3E-06 1E-10 79.5 8.1 91 10-151 144-235 (367)
224 3lad_A Dihydrolipoamide dehydr 98.2 1E-05 3.5E-10 78.7 12.2 97 10-151 181-281 (476)
225 4dsg_A UDP-galactopyranose mut 98.2 1.4E-06 4.9E-11 84.8 5.7 42 3-44 3-45 (484)
226 4dna_A Probable glutathione re 98.2 7.1E-06 2.4E-10 79.5 10.5 97 9-151 170-269 (463)
227 2jae_A L-amino acid oxidase; o 98.2 1.7E-06 5.7E-11 84.6 5.8 39 6-44 8-46 (489)
228 3itj_A Thioredoxin reductase 1 98.1 9.3E-06 3.2E-10 74.9 10.4 89 10-149 174-270 (338)
229 3ab1_A Ferredoxin--NADP reduct 98.1 1E-05 3.4E-10 75.6 10.4 94 10-150 164-263 (360)
230 3dgh_A TRXR-1, thioredoxin red 98.1 2.1E-05 7.3E-10 76.6 12.3 96 10-151 188-290 (483)
231 2q0l_A TRXR, thioredoxin reduc 98.1 3.4E-05 1.1E-09 70.4 12.9 89 10-149 144-240 (311)
232 1gte_A Dihydropyrimidine dehyd 98.1 4.1E-07 1.4E-11 96.5 -0.0 99 8-149 186-286 (1025)
233 1sez_A Protoporphyrinogen oxid 98.1 2E-06 7E-11 84.3 4.9 38 7-44 11-48 (504)
234 3ics_A Coenzyme A-disulfide re 98.1 1.3E-05 4.3E-10 80.2 10.2 95 10-151 188-283 (588)
235 3s5w_A L-ornithine 5-monooxyge 98.1 6.1E-06 2.1E-10 80.0 7.5 128 9-149 227-376 (463)
236 1i8t_A UDP-galactopyranose mut 98.1 2.6E-06 8.9E-11 79.8 4.7 36 9-44 1-36 (367)
237 3d1c_A Flavin-containing putat 98.1 1.7E-05 5.9E-10 74.2 10.4 103 10-150 167-272 (369)
238 3dk9_A Grase, GR, glutathione 98.1 3.4E-05 1.2E-09 75.0 12.7 97 10-151 188-294 (478)
239 2zbw_A Thioredoxin reductase; 98.0 3.1E-05 1E-09 71.4 11.6 93 10-149 153-251 (335)
240 3pl8_A Pyranose 2-oxidase; sub 98.0 3E-06 1E-10 84.9 4.9 39 7-45 44-82 (623)
241 3t37_A Probable dehydrogenase; 98.0 2.4E-06 8.3E-11 84.2 4.2 37 7-43 15-52 (526)
242 2vdc_G Glutamate synthase [NAD 98.0 5.5E-06 1.9E-10 79.8 6.1 38 7-44 120-157 (456)
243 2bi7_A UDP-galactopyranose mut 98.0 4.1E-06 1.4E-10 79.0 4.9 36 9-44 3-38 (384)
244 3cty_A Thioredoxin reductase; 98.0 4E-05 1.4E-09 70.1 11.4 89 10-149 156-251 (319)
245 1fl2_A Alkyl hydroperoxide red 98.0 3.8E-05 1.3E-09 69.9 11.1 89 10-149 145-241 (310)
246 1kdg_A CDH, cellobiose dehydro 98.0 4.3E-06 1.5E-10 82.8 5.0 37 7-43 5-41 (546)
247 2q7v_A Thioredoxin reductase; 98.0 6.4E-05 2.2E-09 69.0 12.5 89 10-149 153-248 (325)
248 3kd9_A Coenzyme A disulfide re 98.0 2.8E-05 9.4E-10 75.0 10.2 96 10-151 149-245 (449)
249 2iid_A L-amino-acid oxidase; f 98.0 5.5E-06 1.9E-10 81.1 5.4 39 6-44 30-68 (498)
250 3dgz_A Thioredoxin reductase 2 98.0 5.9E-05 2E-09 73.5 12.5 96 10-151 186-288 (488)
251 3f8d_A Thioredoxin reductase ( 97.9 5.8E-05 2E-09 69.0 10.9 90 10-150 155-251 (323)
252 3l8k_A Dihydrolipoyl dehydroge 97.9 5.1E-05 1.8E-09 73.5 10.5 97 9-152 172-274 (466)
253 3r9u_A Thioredoxin reductase; 97.9 8.2E-05 2.8E-09 67.8 11.3 90 10-149 148-243 (315)
254 1ju2_A HydroxynitrIle lyase; f 97.8 5.4E-06 1.8E-10 81.7 2.6 36 7-43 24-59 (536)
255 4eqs_A Coenzyme A disulfide re 97.8 3.2E-05 1.1E-09 74.3 7.9 93 10-151 148-241 (437)
256 3q9t_A Choline dehydrogenase a 97.8 1E-05 3.5E-10 80.1 4.6 37 7-43 4-41 (577)
257 3fbs_A Oxidoreductase; structu 97.8 1.9E-05 6.4E-10 71.4 5.9 85 9-149 141-225 (297)
258 3lzw_A Ferredoxin--NADP reduct 97.8 4.2E-05 1.4E-09 70.3 7.9 90 10-150 155-250 (332)
259 1vdc_A NTR, NADPH dependent th 97.8 0.00013 4.5E-09 67.1 11.0 89 10-149 160-258 (333)
260 3qvp_A Glucose oxidase; oxidor 97.8 1.4E-05 4.7E-10 79.2 4.4 36 7-42 17-53 (583)
261 3qfa_A Thioredoxin reductase 1 97.8 0.00025 8.7E-09 69.5 13.5 96 10-151 211-316 (519)
262 1o94_A Tmadh, trimethylamine d 97.8 2.3E-05 7.7E-10 80.3 5.8 37 7-43 387-423 (729)
263 2a87_A TRXR, TR, thioredoxin r 97.7 0.00011 3.7E-09 67.8 9.5 89 10-149 156-251 (335)
264 2z3y_A Lysine-specific histone 97.7 3E-05 1E-09 78.5 5.9 38 7-44 105-142 (662)
265 4g6h_A Rotenone-insensitive NA 97.7 0.00013 4.4E-09 71.2 9.7 95 10-149 218-331 (502)
266 1lqt_A FPRA; NADP+ derivative, 97.7 1.9E-05 6.6E-10 76.1 3.8 36 8-43 2-44 (456)
267 3gwf_A Cyclohexanone monooxyge 97.7 7.1E-05 2.4E-09 73.7 7.9 35 10-44 179-213 (540)
268 3fim_B ARYL-alcohol oxidase; A 97.7 1.2E-05 4.2E-10 79.3 2.4 35 9-43 2-37 (566)
269 1ps9_A 2,4-dienoyl-COA reducta 97.7 2.9E-05 1E-09 78.8 5.3 37 8-44 372-408 (671)
270 1coy_A Cholesterol oxidase; ox 97.7 3.8E-05 1.3E-09 75.2 5.7 38 6-43 8-45 (507)
271 2xag_A Lysine-specific histone 97.7 4.2E-05 1.4E-09 79.0 6.0 38 7-44 276-313 (852)
272 3klj_A NAD(FAD)-dependent dehy 97.6 2.4E-05 8.1E-10 73.7 3.4 85 10-151 147-232 (385)
273 2x8g_A Thioredoxin glutathione 97.6 0.00062 2.1E-08 68.1 13.8 95 11-151 288-396 (598)
274 1n4w_A CHOD, cholesterol oxida 97.6 3.6E-05 1.2E-09 75.3 4.6 37 7-43 3-39 (504)
275 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00037 1.3E-08 68.4 11.3 89 10-149 356-452 (521)
276 1cjc_A Protein (adrenodoxin re 97.6 4.8E-05 1.6E-09 73.4 4.7 99 8-150 5-106 (460)
277 1gpe_A Protein (glucose oxidas 97.6 5.1E-05 1.7E-09 75.6 5.0 38 7-44 22-60 (587)
278 2jbv_A Choline oxidase; alcoho 97.5 6E-05 2.1E-09 74.4 4.9 37 8-44 12-49 (546)
279 1vg0_A RAB proteins geranylger 97.5 0.00011 3.7E-09 73.0 6.4 39 6-44 5-43 (650)
280 2gv8_A Monooxygenase; FMO, FAD 97.4 0.00021 7.2E-09 68.8 7.5 78 10-150 213-292 (447)
281 3uox_A Otemo; baeyer-villiger 97.4 2.5E-05 8.5E-10 77.1 0.7 36 9-44 185-220 (545)
282 3ayj_A Pro-enzyme of L-phenyla 97.3 9.4E-05 3.2E-09 74.4 3.7 34 9-42 56-97 (721)
283 2xve_A Flavin-containing monoo 97.3 0.00051 1.8E-08 66.3 8.4 79 10-150 198-276 (464)
284 4ap3_A Steroid monooxygenase; 97.3 0.00025 8.6E-09 69.9 5.9 36 9-44 191-226 (549)
285 2gag_A Heterotetrameric sarcos 97.0 0.00079 2.7E-08 71.0 7.0 88 10-151 285-384 (965)
286 1cjc_A Protein (adrenodoxin re 96.9 0.0039 1.3E-07 60.0 9.8 35 9-43 145-200 (460)
287 1gte_A Dihydropyrimidine dehyd 96.9 0.006 2.1E-07 64.8 12.1 91 11-150 334-442 (1025)
288 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.0035 1.2E-07 63.5 9.5 130 9-149 494-627 (671)
289 4a9w_A Monooxygenase; baeyer-v 96.8 0.0012 4.1E-08 61.0 5.6 33 10-43 164-196 (357)
290 1o94_A Tmadh, trimethylamine d 96.8 0.001 3.5E-08 68.0 5.6 33 10-42 529-563 (729)
291 2g1u_A Hypothetical protein TM 96.8 0.0012 4.2E-08 53.2 4.8 36 7-42 17-52 (155)
292 1lqt_A FPRA; NADP+ derivative, 96.8 0.0069 2.4E-07 58.2 10.7 128 9-150 147-326 (456)
293 2vdc_G Glutamate synthase [NAD 96.8 0.0014 4.8E-08 63.0 5.8 36 9-44 264-300 (456)
294 3fwz_A Inner membrane protein 96.7 0.002 6.7E-08 51.0 5.4 35 8-42 6-40 (140)
295 4a5l_A Thioredoxin reductase; 96.6 0.014 4.7E-07 52.8 10.7 33 10-42 153-185 (314)
296 3llv_A Exopolyphosphatase-rela 96.5 0.0021 7.3E-08 50.7 4.5 33 10-42 7-39 (141)
297 3h8l_A NADH oxidase; membrane 96.4 0.0084 2.9E-07 56.7 8.2 49 97-149 220-269 (409)
298 1id1_A Putative potassium chan 96.3 0.0049 1.7E-07 49.5 5.5 34 9-42 3-36 (153)
299 3h28_A Sulfide-quinone reducta 96.3 0.0052 1.8E-07 58.6 6.5 49 99-149 204-255 (430)
300 1lss_A TRK system potassium up 96.1 0.0042 1.4E-07 48.7 4.0 33 10-42 5-37 (140)
301 3sx6_A Sulfide-quinone reducta 96.1 0.0089 3.1E-07 57.1 7.0 48 100-149 213-268 (437)
302 3ic5_A Putative saccharopine d 96.1 0.0043 1.5E-07 47.0 3.6 33 10-42 6-39 (118)
303 1w4x_A Phenylacetone monooxyge 95.9 0.0051 1.7E-07 60.6 4.1 36 9-44 186-221 (542)
304 3ado_A Lambda-crystallin; L-gu 95.8 0.0069 2.4E-07 54.8 4.4 35 8-42 5-39 (319)
305 1pzg_A LDH, lactate dehydrogen 95.8 0.01 3.5E-07 54.2 5.4 40 3-42 3-43 (331)
306 4gcm_A TRXR, thioredoxin reduc 95.7 0.0077 2.6E-07 54.5 4.3 33 11-43 147-179 (312)
307 2hmt_A YUAA protein; RCK, KTN, 95.6 0.012 4.1E-07 46.3 4.5 33 10-42 7-39 (144)
308 3c85_A Putative glutathione-re 95.6 0.011 3.9E-07 48.8 4.5 34 9-42 39-73 (183)
309 3l4b_C TRKA K+ channel protien 95.5 0.012 4E-07 50.4 4.5 32 11-42 2-33 (218)
310 4e12_A Diketoreductase; oxidor 95.5 0.012 4E-07 52.6 4.7 34 9-42 4-37 (283)
311 2dpo_A L-gulonate 3-dehydrogen 95.2 0.015 5.2E-07 52.8 4.4 34 9-42 6-39 (319)
312 2hjr_A Malate dehydrogenase; m 95.1 0.021 7.2E-07 52.1 5.2 35 8-42 13-48 (328)
313 1y56_A Hypothetical protein PH 95.1 0.02 6.7E-07 55.6 5.2 49 103-151 265-314 (493)
314 1f0y_A HCDH, L-3-hydroxyacyl-C 95.1 0.019 6.3E-07 51.9 4.7 33 10-42 16-48 (302)
315 4fk1_A Putative thioredoxin re 95.1 0.041 1.4E-06 49.5 7.0 86 10-148 147-234 (304)
316 3lk7_A UDP-N-acetylmuramoylala 95.0 0.019 6.5E-07 55.0 4.7 35 8-42 8-42 (451)
317 2raf_A Putative dinucleotide-b 95.0 0.026 8.8E-07 47.9 5.1 36 8-43 18-53 (209)
318 2z3y_A Lysine-specific histone 95.0 1 3.4E-05 45.3 17.5 42 108-149 409-457 (662)
319 3i83_A 2-dehydropantoate 2-red 94.9 0.023 8E-07 51.7 4.8 33 10-42 3-35 (320)
320 4b63_A L-ornithine N5 monooxyg 94.9 0.039 1.3E-06 53.7 6.5 34 10-43 247-282 (501)
321 3k96_A Glycerol-3-phosphate de 94.9 0.023 7.7E-07 52.5 4.6 35 8-42 28-62 (356)
322 2ewd_A Lactate dehydrogenase,; 94.8 0.027 9.2E-07 51.2 4.9 34 9-42 4-38 (317)
323 1bg6_A N-(1-D-carboxylethyl)-L 94.7 0.022 7.6E-07 52.7 4.3 33 10-42 5-37 (359)
324 3tl2_A Malate dehydrogenase; c 94.7 0.032 1.1E-06 50.5 5.1 36 6-41 5-41 (315)
325 4huj_A Uncharacterized protein 94.7 0.023 8E-07 48.6 4.0 36 7-42 21-57 (220)
326 3qha_A Putative oxidoreductase 94.6 0.024 8E-07 51.0 4.0 35 9-43 15-49 (296)
327 3l6d_A Putative oxidoreductase 94.6 0.042 1.4E-06 49.6 5.6 36 7-42 7-42 (306)
328 1sez_A Protoporphyrinogen oxid 94.6 0.51 1.7E-05 45.6 13.7 35 275-315 461-495 (504)
329 3dfz_A SIRC, precorrin-2 dehyd 94.5 0.035 1.2E-06 47.3 4.6 33 9-41 31-63 (223)
330 1t2d_A LDH-P, L-lactate dehydr 94.5 0.04 1.4E-06 50.1 5.3 35 8-42 3-38 (322)
331 3hn2_A 2-dehydropantoate 2-red 94.5 0.028 9.7E-07 50.9 4.3 33 10-42 3-35 (312)
332 3ghy_A Ketopantoate reductase 94.4 0.04 1.4E-06 50.5 5.1 32 10-41 4-35 (335)
333 3doj_A AT3G25530, dehydrogenas 94.3 0.045 1.5E-06 49.5 5.1 35 8-42 20-54 (310)
334 1ks9_A KPA reductase;, 2-dehyd 94.2 0.048 1.6E-06 48.6 5.0 33 11-43 2-34 (291)
335 4g65_A TRK system potassium up 94.2 0.015 5.3E-07 55.7 1.8 34 10-43 4-37 (461)
336 4e21_A 6-phosphogluconate dehy 94.2 0.037 1.3E-06 51.1 4.3 37 6-42 19-55 (358)
337 2uyy_A N-PAC protein; long-cha 94.1 0.064 2.2E-06 48.6 5.7 34 9-42 30-63 (316)
338 2ew2_A 2-dehydropantoate 2-red 94.1 0.039 1.3E-06 49.9 4.2 32 11-42 5-36 (316)
339 3g17_A Similar to 2-dehydropan 94.0 0.038 1.3E-06 49.6 4.0 33 10-42 3-35 (294)
340 3g0o_A 3-hydroxyisobutyrate de 94.0 0.041 1.4E-06 49.6 4.3 35 8-42 6-40 (303)
341 3k6j_A Protein F01G10.3, confi 94.0 0.054 1.8E-06 51.5 5.1 34 10-43 55-88 (460)
342 3l9w_A Glutathione-regulated p 94.0 0.043 1.5E-06 51.7 4.5 34 10-43 5-38 (413)
343 4dio_A NAD(P) transhydrogenase 94.0 0.056 1.9E-06 50.4 5.1 34 9-42 190-223 (405)
344 1lld_A L-lactate dehydrogenase 93.9 0.052 1.8E-06 49.3 4.8 34 9-42 7-42 (319)
345 2x5o_A UDP-N-acetylmuramoylala 93.9 0.043 1.5E-06 52.3 4.4 34 10-43 6-39 (439)
346 1kyq_A Met8P, siroheme biosynt 93.8 0.032 1.1E-06 49.2 3.0 34 9-42 13-46 (274)
347 4dll_A 2-hydroxy-3-oxopropiona 93.8 0.041 1.4E-06 50.0 3.9 34 9-42 31-64 (320)
348 3gg2_A Sugar dehydrogenase, UD 93.7 0.05 1.7E-06 51.9 4.3 33 10-42 3-35 (450)
349 1jw9_B Molybdopterin biosynthe 93.6 0.055 1.9E-06 47.2 4.2 34 10-43 32-66 (249)
350 2y0c_A BCEC, UDP-glucose dehyd 93.6 0.051 1.8E-06 52.3 4.3 34 9-42 8-41 (478)
351 1zcj_A Peroxisomal bifunctiona 93.6 0.062 2.1E-06 51.5 4.8 34 9-42 37-70 (463)
352 3mog_A Probable 3-hydroxybutyr 93.5 0.063 2.2E-06 51.7 4.8 34 9-42 5-38 (483)
353 4b1b_A TRXR, thioredoxin reduc 93.5 0.062 2.1E-06 52.6 4.7 33 10-42 224-256 (542)
354 3pqe_A L-LDH, L-lactate dehydr 93.5 0.074 2.5E-06 48.3 4.9 36 7-42 3-40 (326)
355 3ggo_A Prephenate dehydrogenas 93.4 0.075 2.6E-06 48.1 4.9 34 9-42 33-68 (314)
356 3p2y_A Alanine dehydrogenase/p 93.4 0.061 2.1E-06 49.6 4.3 34 9-42 184-217 (381)
357 3vku_A L-LDH, L-lactate dehydr 93.4 0.072 2.5E-06 48.3 4.7 40 2-41 2-43 (326)
358 3lxd_A FAD-dependent pyridine 93.4 0.069 2.3E-06 50.5 4.8 36 9-44 152-187 (415)
359 3ktd_A Prephenate dehydrogenas 93.4 0.079 2.7E-06 48.4 5.0 36 7-42 6-41 (341)
360 3dfu_A Uncharacterized protein 93.4 0.021 7.3E-07 48.9 1.0 34 7-40 4-37 (232)
361 3g79_A NDP-N-acetyl-D-galactos 93.3 0.056 1.9E-06 51.8 4.0 36 8-43 17-54 (478)
362 1zej_A HBD-9, 3-hydroxyacyl-CO 93.3 0.06 2E-06 48.1 3.9 33 9-42 12-44 (293)
363 3gvi_A Malate dehydrogenase; N 93.2 0.091 3.1E-06 47.6 5.0 35 8-42 6-41 (324)
364 2aef_A Calcium-gated potassium 93.1 0.033 1.1E-06 48.0 2.0 34 8-42 8-41 (234)
365 3ego_A Probable 2-dehydropanto 93.0 0.088 3E-06 47.5 4.7 32 10-42 3-34 (307)
366 2bcg_G Secretory pathway GDP d 93.0 0.1 3.6E-06 49.9 5.4 40 5-44 7-46 (453)
367 2v6b_A L-LDH, L-lactate dehydr 93.0 0.093 3.2E-06 47.2 4.7 32 11-42 2-35 (304)
368 1z82_A Glycerol-3-phosphate de 93.0 0.093 3.2E-06 48.0 4.8 35 8-42 13-47 (335)
369 1y6j_A L-lactate dehydrogenase 93.0 0.1 3.5E-06 47.3 5.0 35 8-42 6-42 (318)
370 3oj0_A Glutr, glutamyl-tRNA re 93.0 0.034 1.2E-06 43.9 1.6 33 10-42 22-54 (144)
371 2izz_A Pyrroline-5-carboxylate 92.9 0.099 3.4E-06 47.5 4.9 36 7-42 20-59 (322)
372 3c24_A Putative oxidoreductase 92.8 0.1 3.6E-06 46.4 4.8 33 10-42 12-45 (286)
373 1ldn_A L-lactate dehydrogenase 92.8 0.11 3.9E-06 46.9 5.0 35 8-42 5-41 (316)
374 1vpd_A Tartronate semialdehyde 92.8 0.064 2.2E-06 48.1 3.4 33 10-42 6-38 (299)
375 2qyt_A 2-dehydropantoate 2-red 92.7 0.066 2.2E-06 48.4 3.5 31 10-40 9-45 (317)
376 3dtt_A NADP oxidoreductase; st 92.7 0.088 3E-06 45.7 4.1 35 8-42 18-52 (245)
377 1x13_A NAD(P) transhydrogenase 92.7 0.092 3.2E-06 49.2 4.5 34 9-42 172-205 (401)
378 3qsg_A NAD-binding phosphogluc 92.7 0.089 3E-06 47.6 4.3 34 9-42 24-58 (312)
379 3hwr_A 2-dehydropantoate 2-red 92.7 0.082 2.8E-06 47.9 4.1 33 9-42 19-51 (318)
380 2q3e_A UDP-glucose 6-dehydroge 92.7 0.062 2.1E-06 51.6 3.4 34 9-42 5-40 (467)
381 3p7m_A Malate dehydrogenase; p 92.7 0.13 4.3E-06 46.7 5.2 34 9-42 5-39 (321)
382 3pef_A 6-phosphogluconate dehy 92.7 0.1 3.6E-06 46.4 4.6 33 11-43 3-35 (287)
383 1evy_A Glycerol-3-phosphate de 92.7 0.068 2.3E-06 49.6 3.5 32 11-42 17-48 (366)
384 2vns_A Metalloreductase steap3 92.6 0.13 4.4E-06 43.6 4.9 34 9-42 28-61 (215)
385 2pv7_A T-protein [includes: ch 92.6 0.16 5.5E-06 45.5 5.8 33 10-42 22-55 (298)
386 1l7d_A Nicotinamide nucleotide 92.5 0.12 4E-06 48.3 4.9 34 9-42 172-205 (384)
387 4a7p_A UDP-glucose dehydrogena 92.5 0.12 4.2E-06 49.0 5.1 36 8-43 7-42 (446)
388 3orq_A N5-carboxyaminoimidazol 92.5 0.17 5.8E-06 47.1 6.0 36 8-43 11-46 (377)
389 3vtf_A UDP-glucose 6-dehydroge 92.5 0.12 4E-06 48.9 4.8 35 8-42 20-54 (444)
390 3d0o_A L-LDH 1, L-lactate dehy 92.4 0.12 4E-06 46.9 4.7 35 8-42 5-41 (317)
391 1ur5_A Malate dehydrogenase; o 92.4 0.13 4.6E-06 46.3 4.9 33 10-42 3-36 (309)
392 3pid_A UDP-glucose 6-dehydroge 92.4 0.092 3.2E-06 49.5 3.9 33 9-42 36-68 (432)
393 1guz_A Malate dehydrogenase; o 92.3 0.13 4.6E-06 46.3 4.9 32 11-42 2-35 (310)
394 1pjc_A Protein (L-alanine dehy 92.3 0.095 3.2E-06 48.5 4.0 33 10-42 168-200 (361)
395 3cky_A 2-hydroxymethyl glutara 92.3 0.081 2.8E-06 47.5 3.4 34 9-42 4-37 (301)
396 2o3j_A UDP-glucose 6-dehydroge 92.2 0.088 3E-06 50.8 3.7 33 10-42 10-44 (481)
397 3ius_A Uncharacterized conserv 92.2 0.11 3.7E-06 46.1 4.1 33 10-42 6-38 (286)
398 1x0v_A GPD-C, GPDH-C, glycerol 92.1 0.076 2.6E-06 48.9 3.1 34 10-43 9-49 (354)
399 2rcy_A Pyrroline carboxylate r 92.1 0.16 5.4E-06 44.5 4.9 34 10-43 5-42 (262)
400 1mv8_A GMD, GDP-mannose 6-dehy 92.1 0.085 2.9E-06 50.2 3.4 32 11-42 2-33 (436)
401 4gwg_A 6-phosphogluconate dehy 92.1 0.16 5.6E-06 48.6 5.4 35 9-43 4-38 (484)
402 3pdu_A 3-hydroxyisobutyrate de 91.9 0.11 3.6E-06 46.4 3.7 32 11-42 3-34 (287)
403 2eez_A Alanine dehydrogenase; 91.8 0.12 4E-06 48.0 4.0 33 10-42 167-199 (369)
404 2zyd_A 6-phosphogluconate dehy 91.8 0.13 4.3E-06 49.6 4.2 36 7-42 13-48 (480)
405 3gpi_A NAD-dependent epimerase 91.7 0.2 6.9E-06 44.3 5.4 34 10-43 4-37 (286)
406 1txg_A Glycerol-3-phosphate de 91.7 0.13 4.4E-06 46.9 4.1 30 11-40 2-31 (335)
407 3eag_A UDP-N-acetylmuramate:L- 91.7 0.14 4.9E-06 46.5 4.3 34 10-43 5-39 (326)
408 3dhn_A NAD-dependent epimerase 91.6 0.17 5.9E-06 43.0 4.6 34 10-43 5-39 (227)
409 4ezb_A Uncharacterized conserv 91.6 0.13 4.4E-06 46.6 3.9 33 10-42 25-58 (317)
410 1ez4_A Lactate dehydrogenase; 91.6 0.17 5.9E-06 45.7 4.7 37 6-42 2-40 (318)
411 2h78_A Hibadh, 3-hydroxyisobut 91.5 0.11 3.8E-06 46.6 3.4 33 10-42 4-36 (302)
412 2f1k_A Prephenate dehydrogenas 91.5 0.15 5.2E-06 45.1 4.2 32 11-42 2-33 (279)
413 2xag_A Lysine-specific histone 91.5 3.8 0.00013 42.3 15.0 41 109-149 581-628 (852)
414 1nyt_A Shikimate 5-dehydrogena 91.4 0.19 6.3E-06 44.4 4.7 33 10-42 120-152 (271)
415 2p4q_A 6-phosphogluconate dehy 91.4 0.21 7.3E-06 48.2 5.4 35 8-42 9-43 (497)
416 3hyw_A Sulfide-quinone reducta 91.4 0.77 2.6E-05 43.4 9.3 48 100-149 205-255 (430)
417 3phh_A Shikimate dehydrogenase 91.4 0.21 7.2E-06 43.8 4.9 34 9-42 118-151 (269)
418 2vhw_A Alanine dehydrogenase; 91.3 0.14 4.8E-06 47.6 4.0 34 9-42 168-201 (377)
419 3ond_A Adenosylhomocysteinase; 91.3 0.15 5.2E-06 48.6 4.2 34 9-42 265-298 (488)
420 1oju_A MDH, malate dehydrogena 91.3 0.14 4.7E-06 45.8 3.7 32 11-42 2-35 (294)
421 3tri_A Pyrroline-5-carboxylate 91.3 0.24 8.3E-06 43.9 5.3 33 10-42 4-39 (280)
422 3ldh_A Lactate dehydrogenase; 91.2 0.25 8.6E-06 44.7 5.4 35 8-42 20-56 (330)
423 4ffl_A PYLC; amino acid, biosy 91.2 0.2 7E-06 46.2 5.0 34 11-44 3-36 (363)
424 4gx0_A TRKA domain protein; me 91.2 0.2 6.7E-06 49.4 5.1 35 10-44 349-383 (565)
425 1a5z_A L-lactate dehydrogenase 91.2 0.17 5.9E-06 45.8 4.3 32 11-42 2-35 (319)
426 1jay_A Coenzyme F420H2:NADP+ o 91.0 0.19 6.5E-06 42.3 4.2 32 11-42 2-34 (212)
427 2a9f_A Putative malic enzyme ( 91.0 0.19 6.5E-06 46.3 4.3 35 8-42 187-222 (398)
428 1dlj_A UDP-glucose dehydrogena 91.0 0.13 4.5E-06 48.2 3.4 31 11-42 2-32 (402)
429 2wtb_A MFP2, fatty acid multif 90.9 0.22 7.4E-06 50.6 5.2 33 10-42 313-345 (725)
430 2zqz_A L-LDH, L-lactate dehydr 90.8 0.24 8.1E-06 45.0 4.8 40 3-42 3-44 (326)
431 3nep_X Malate dehydrogenase; h 90.8 0.21 7.2E-06 45.0 4.4 32 11-42 2-35 (314)
432 3gt0_A Pyrroline-5-carboxylate 90.8 0.24 8.1E-06 43.0 4.7 33 10-42 3-39 (247)
433 1yqg_A Pyrroline-5-carboxylate 90.8 0.17 5.8E-06 44.3 3.7 32 11-42 2-34 (263)
434 1yj8_A Glycerol-3-phosphate de 90.7 0.19 6.6E-06 46.6 4.3 34 10-43 22-62 (375)
435 2pgd_A 6-phosphogluconate dehy 90.7 0.26 8.7E-06 47.5 5.2 33 10-42 3-35 (482)
436 2i6t_A Ubiquitin-conjugating e 90.7 0.22 7.5E-06 44.7 4.4 34 9-42 14-49 (303)
437 3h8v_A Ubiquitin-like modifier 90.7 0.23 7.7E-06 44.2 4.4 35 9-43 36-71 (292)
438 3q2o_A Phosphoribosylaminoimid 90.6 0.33 1.1E-05 45.3 5.8 35 9-43 14-48 (389)
439 2gf2_A Hibadh, 3-hydroxyisobut 90.6 0.22 7.5E-06 44.5 4.4 32 11-42 2-33 (296)
440 2iz1_A 6-phosphogluconate dehy 90.6 0.23 7.9E-06 47.7 4.8 34 9-42 5-38 (474)
441 2g5c_A Prephenate dehydrogenas 90.6 0.2 6.8E-06 44.4 4.1 32 11-42 3-36 (281)
442 1wdk_A Fatty oxidation complex 90.5 0.26 9E-06 49.9 5.3 34 9-42 314-347 (715)
443 3d1l_A Putative NADP oxidoredu 90.5 0.21 7E-06 43.9 4.1 34 9-42 10-44 (266)
444 2egg_A AROE, shikimate 5-dehyd 90.5 0.23 7.8E-06 44.5 4.4 33 10-42 142-175 (297)
445 1rkx_A CDP-glucose-4,6-dehydra 90.5 0.13 4.6E-06 47.2 3.0 43 1-43 1-44 (357)
446 3rui_A Ubiquitin-like modifier 90.5 0.28 9.4E-06 44.5 4.8 35 9-43 34-69 (340)
447 3e8x_A Putative NAD-dependent 90.4 0.24 8.3E-06 42.4 4.4 34 9-42 21-55 (236)
448 3ew7_A LMO0794 protein; Q8Y8U8 90.2 0.29 1E-05 41.2 4.7 32 11-42 2-34 (221)
449 4aj2_A L-lactate dehydrogenase 90.2 0.38 1.3E-05 43.6 5.6 36 7-42 17-54 (331)
450 1np3_A Ketol-acid reductoisome 90.2 0.33 1.1E-05 44.3 5.3 33 10-42 17-49 (338)
451 1pjq_A CYSG, siroheme synthase 90.1 0.22 7.6E-06 47.5 4.2 33 9-41 12-44 (457)
452 1zud_1 Adenylyltransferase THI 90.1 0.23 7.9E-06 43.2 4.0 35 9-43 28-63 (251)
453 2we8_A Xanthine dehydrogenase; 90.1 0.39 1.3E-05 44.5 5.7 37 8-44 203-239 (386)
454 3ce6_A Adenosylhomocysteinase; 90.1 0.22 7.6E-06 47.8 4.2 34 9-42 274-307 (494)
455 1vl6_A Malate oxidoreductase; 90.0 0.26 8.8E-06 45.4 4.3 34 8-41 191-225 (388)
456 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.0 0.25 8.4E-06 47.6 4.4 32 11-42 3-34 (478)
457 4gbj_A 6-phosphogluconate dehy 90.0 0.17 6E-06 45.2 3.2 33 11-43 7-39 (297)
458 4e4t_A Phosphoribosylaminoimid 90.0 0.42 1.4E-05 45.1 6.0 36 8-43 34-69 (419)
459 3c7a_A Octopine dehydrogenase; 89.9 0.17 5.8E-06 47.6 3.2 30 11-40 4-34 (404)
460 3gvp_A Adenosylhomocysteinase 89.9 0.25 8.5E-06 46.2 4.2 34 9-42 220-253 (435)
461 3vps_A TUNA, NAD-dependent epi 89.9 0.36 1.2E-05 43.4 5.2 35 9-43 7-42 (321)
462 1hdo_A Biliverdin IX beta redu 89.8 0.34 1.2E-05 40.3 4.7 33 10-42 4-37 (206)
463 1hyh_A L-hicdh, L-2-hydroxyiso 89.8 0.27 9.1E-06 44.3 4.2 32 11-42 3-36 (309)
464 3don_A Shikimate dehydrogenase 89.7 0.26 8.8E-06 43.5 4.0 34 9-42 117-151 (277)
465 2cvz_A Dehydrogenase, 3-hydrox 89.7 0.23 8E-06 44.1 3.8 31 11-42 3-33 (289)
466 2hk9_A Shikimate dehydrogenase 89.5 0.29 9.9E-06 43.2 4.2 33 10-42 130-162 (275)
467 2dwc_A PH0318, 433AA long hypo 89.4 0.4 1.4E-05 45.4 5.4 36 8-43 18-53 (433)
468 3d4o_A Dipicolinate synthase s 89.4 0.33 1.1E-05 43.3 4.5 34 9-42 155-188 (293)
469 1kjq_A GART 2, phosphoribosylg 89.3 0.39 1.3E-05 44.7 5.2 40 4-43 6-45 (391)
470 3fi9_A Malate dehydrogenase; s 89.3 0.44 1.5E-05 43.4 5.3 35 8-42 7-44 (343)
471 3h2s_A Putative NADH-flavin re 89.3 0.37 1.3E-05 40.7 4.6 32 11-42 2-34 (224)
472 3u62_A Shikimate dehydrogenase 89.3 0.41 1.4E-05 41.7 4.9 32 11-42 110-142 (253)
473 1p77_A Shikimate 5-dehydrogena 89.2 0.24 8.3E-06 43.7 3.5 33 10-42 120-152 (272)
474 3k5i_A Phosphoribosyl-aminoimi 89.2 0.37 1.3E-05 45.2 4.9 36 6-42 21-56 (403)
475 2rir_A Dipicolinate synthase, 89.2 0.35 1.2E-05 43.4 4.5 34 9-42 157-190 (300)
476 4b4o_A Epimerase family protei 89.1 0.41 1.4E-05 42.6 5.0 33 11-43 2-35 (298)
477 3jyo_A Quinate/shikimate dehyd 88.9 0.41 1.4E-05 42.4 4.7 34 9-42 127-161 (283)
478 1y7t_A Malate dehydrogenase; N 88.9 0.26 9E-06 44.8 3.5 33 9-41 4-44 (327)
479 2d5c_A AROE, shikimate 5-dehyd 88.8 0.46 1.6E-05 41.6 5.0 32 11-42 118-149 (263)
480 3h5n_A MCCB protein; ubiquitin 88.8 0.34 1.1E-05 44.5 4.2 35 9-43 118-153 (353)
481 3abi_A Putative uncharacterize 88.8 0.3 1E-05 45.2 3.9 40 2-42 9-48 (365)
482 3enk_A UDP-glucose 4-epimerase 88.7 0.51 1.7E-05 42.8 5.5 36 8-43 4-40 (341)
483 3zwc_A Peroxisomal bifunctiona 88.7 0.37 1.3E-05 48.8 4.8 35 9-43 316-350 (742)
484 2d4a_B Malate dehydrogenase; a 88.7 0.43 1.5E-05 42.9 4.8 32 11-42 1-33 (308)
485 3ojo_A CAP5O; rossmann fold, c 88.7 0.25 8.4E-06 46.7 3.3 34 10-43 12-45 (431)
486 3r6d_A NAD-dependent epimerase 88.6 0.56 1.9E-05 39.6 5.2 32 11-42 7-40 (221)
487 2r6j_A Eugenol synthase 1; phe 88.5 0.41 1.4E-05 43.0 4.6 34 10-43 12-46 (318)
488 2ahr_A Putative pyrroline carb 88.5 0.31 1E-05 42.5 3.6 33 10-42 4-36 (259)
489 3tnl_A Shikimate dehydrogenase 88.5 0.41 1.4E-05 43.1 4.5 34 9-42 154-188 (315)
490 1nvt_A Shikimate 5'-dehydrogen 88.5 0.32 1.1E-05 43.3 3.8 32 10-42 129-160 (287)
491 1y8q_A Ubiquitin-like 1 activa 88.3 0.41 1.4E-05 43.8 4.4 35 9-43 36-71 (346)
492 4id9_A Short-chain dehydrogena 88.3 0.5 1.7E-05 43.0 5.1 35 9-43 19-54 (347)
493 3b1f_A Putative prephenate deh 88.0 0.34 1.2E-05 43.0 3.7 33 10-42 7-41 (290)
494 1i36_A Conserved hypothetical 88.0 0.39 1.3E-05 41.9 4.0 30 11-40 2-31 (264)
495 3k31_A Enoyl-(acyl-carrier-pro 87.9 0.61 2.1E-05 41.6 5.3 33 10-42 31-66 (296)
496 3pwz_A Shikimate dehydrogenase 87.9 0.54 1.8E-05 41.4 4.8 34 9-42 120-154 (272)
497 1b8p_A Protein (malate dehydro 87.8 0.33 1.1E-05 44.1 3.5 33 9-41 5-45 (329)
498 4gsl_A Ubiquitin-like modifier 87.7 0.52 1.8E-05 46.1 4.8 35 9-43 326-361 (615)
499 2dbq_A Glyoxylate reductase; D 87.5 0.6 2.1E-05 42.5 5.0 34 9-42 150-183 (334)
500 1gpj_A Glutamyl-tRNA reductase 87.5 0.44 1.5E-05 44.7 4.2 34 9-42 167-201 (404)
No 1
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.7e-36 Score=289.45 Aligned_cols=342 Identities=15% Similarity=0.160 Sum_probs=221.7
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccc--hhHHHhhcCchh---hhhhccCCeEEEecCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGV--WVDEFEAMDLLD---CLDTTWSGAVVHIDDNT 81 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~--~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~ 81 (426)
|++|||+||||||||+++|+.|+++|++|+||||++.++.+..||. ....++.+++.. .+.....+..+..+...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCc
Confidence 3569999999999999999999999999999999987776666664 334566666542 22333344444443332
Q ss_pred ccc------cCCCcc-ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEE--EcCC--cEEEcCEEEECCCCC
Q 014377 82 KKD------LDRPYG-RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLI--CNDG--VTIQAAVVLDATGFS 149 (426)
Q Consensus 82 ~~~------~~~~~~-~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~--~~~g--~~i~a~~vV~AdG~~ 149 (426)
... ....++ .++|..|++.|.+.+.+.|++++ +++|+++..+++.+... ..++ .+++||+||+|||.+
T Consensus 82 ~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp SCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred eEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 211 112222 48999999999999999999999 99999999888765432 2233 468999999999999
Q ss_pred CccccccCCCC---CceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEeccc
Q 014377 150 RCLVQYDKPYN---PGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETS 226 (426)
Q Consensus 150 s~~r~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~ 226 (426)
|.+++.++... ..................+++...+.. .. ....++.|++|.+++...++...
T Consensus 162 S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------~~~~g~~~~~~~~~~~~~vg~~~ 227 (397)
T 3oz2_A 162 SEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYL-GS-------------IAPAGYIWVFPKGEGMANVGIGS 227 (397)
T ss_dssp CHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEEC-ST-------------TSTTEEEEEEEEETTEEEEEEEE
T ss_pred cHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeee-ec-------------cCCCceEEEeecccceeEEEEee
Confidence 99998765422 112233333334333333333322211 00 11248899999999876655432
Q ss_pred CcCCCCCChHHHHHHHHHHHhhc-CCccccccccceEeecCCCCCC-CCCCceeEeeccCCCCCCCCcHHHHHHHHhcHH
Q 014377 227 LVARPGVPMKDIQERMVARLKHL-GIKVRSIEEDEHCVIPMGGPLP-VLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPI 304 (426)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~-~~~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~ 304 (426)
.... ......+.+.+.+++... ........+...+.+|+..... .+.+|++++|||||.++|++|+|++.|++||..
T Consensus 228 ~~~~-~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~ 306 (397)
T 3oz2_A 228 SINW-IHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMY 306 (397)
T ss_dssp ETTT-SCSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHH
T ss_pred ccch-hhhhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHH
Confidence 2221 123444555555444432 1111222334455667654433 346899999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCC-CchhhhHHHHHHhcCCHHHHHHHHHHHhHHHHHhCCChhHHHHHHHHhc
Q 014377 305 VANAIVRSLSSDRS-ISGHKLSAEVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFF 367 (426)
Q Consensus 305 la~~i~~~l~~~~~-~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 367 (426)
+|++|.++++.++. ...++.|++.|++.+...... .....+.+..++++.+..+++-+.
T Consensus 307 ~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 366 (397)
T 3oz2_A 307 AAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLR----NWVAKEKLAMLSDDTLDKLVDIVS 366 (397)
T ss_dssp HHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999876654 245788998877644322211 112345566666666655555443
No 2
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=8.1e-36 Score=286.32 Aligned_cols=344 Identities=15% Similarity=0.141 Sum_probs=231.4
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccc--hhHHHhhcCchhh---hhhccCCeEEEecCCCc
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGV--WVDEFEAMDLLDC---LDTTWSGAVVHIDDNTK 82 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~--~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~ 82 (426)
+++||+||||||+|+++|+.|++.|++|+|||+++.++.+..++. +...++.+++.+. ....+.+..+.......
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCE
Confidence 468999999999999999999999999999999986554444433 3455777776432 22333443443333222
Q ss_pred -cccC-----CC-ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEE-EEE---cCCcEEEcCEEEECCCCCC
Q 014377 83 -KDLD-----RP-YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSL-LIC---NDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 83 -~~~~-----~~-~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~---~~g~~i~a~~vV~AdG~~s 150 (426)
.... .+ ...++|..|.+.|.+.+.+.|++++ +++|++++.+++.++ |++ .++.+++||+||+|||.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp CEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 1111 12 3358999999999999999999999 999999998888776 666 3456899999999999999
Q ss_pred ccccccCCCC-C--ceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccC
Q 014377 151 CLVQYDKPYN-P--GYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSL 227 (426)
Q Consensus 151 ~~r~~~~~~~-~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~ 227 (426)
.+++.++... . ......++...+.....+++...+. +.. ....+|+|++|.+++++.++.+..
T Consensus 163 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------~~~~g~~~~~P~~~~~~~vg~~~~ 228 (397)
T 3cgv_A 163 EFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFY-LGS-------------IAPAGYIWVFPKGEGMANVGIGSS 228 (397)
T ss_dssp HHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEE-CST-------------TSTTEEEEEEEEETTEEEEEEEEE
T ss_pred HhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEE-eCC-------------cCCCceEEEEECCCCeEEEEEEec
Confidence 9988765433 1 2233445554444333333322111 111 011489999999998876665543
Q ss_pred cCCCCCChHHHHHHHHHHHhhc-CCccccccccceEeecCCCCCCC-CCCceeEeeccCCCCCCCCcHHHHHHHHhcHHH
Q 014377 228 VARPGVPMKDIQERMVARLKHL-GIKVRSIEEDEHCVIPMGGPLPV-LPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIV 305 (426)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~-~~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~l 305 (426)
.... .......+.+.+++... .+...++.+...+.+|+....+. +.+|++++|||||.++|++|+|++.|+++|..|
T Consensus 229 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~l 307 (397)
T 3cgv_A 229 INWI-HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYA 307 (397)
T ss_dssp TTTC-SCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHH
T ss_pred cccc-cCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecCCCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHH
Confidence 2221 23344555555555442 12233445566778888655444 468999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCC-CchhhhHHHHHHhcCCHHHHHHHHHHHhHHHHHhCCChhHHHHHHHHhcCCC
Q 014377 306 ANAIVRSLSSDRS-ISGHKLSAEVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLE 370 (426)
Q Consensus 306 a~~i~~~l~~~~~-~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 370 (426)
|+.|.+.+..++. ...+..|++.|+..+..... +.....+++..++++...++++.+...+
T Consensus 308 a~~l~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (397)
T 3cgv_A 308 AQVTKEAIESNDYSPQMMQKYEKLIKERFERKHL----RNWVAKEKLAMLSDDTLDKLVDIVSEQV 369 (397)
T ss_dssp HHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTTCCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhCCHHHHHHHHHhcCccc
Confidence 9999988754432 24567888776643322222 2223355667778888888888766655
No 3
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=4.6e-34 Score=278.41 Aligned_cols=357 Identities=17% Similarity=0.164 Sum_probs=221.8
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCC-CCcccc--hhHHHhhcCchhhh----hhccCCeEEEec
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIW-PNNYGV--WVDEFEAMDLLDCL----DTTWSGAVVHID 78 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~-~~~~g~--~~~~l~~~~~~~~~----~~~~~~~~~~~~ 78 (426)
|.+++||+||||||+|+++|+.|++.|++|+|||+.+.+.. ...+|. ....++.+++.+.. ...+.+..+..+
T Consensus 3 m~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 82 (453)
T 3atr_A 3 KELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSP 82 (453)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECC
Confidence 34579999999999999999999999999999999875321 223332 23456666654321 112222222222
Q ss_pred CCCcc-ccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEE-EEEc---CCc--EEEcCEEEECCCCCC
Q 014377 79 DNTKK-DLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSL-LICN---DGV--TIQAAVVLDATGFSR 150 (426)
Q Consensus 79 ~~~~~-~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~---~g~--~i~a~~vV~AdG~~s 150 (426)
..... ........++|..|.+.|.+.+.+.|++++ +++|++++.+++.++ |++. +|+ +++||+||+|||.+|
T Consensus 83 ~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 83 DMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 21110 011112358999999999999999999999 999999998887754 5543 665 799999999999999
Q ss_pred ccccccCCCC------C--ceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEE
Q 014377 151 CLVQYDKPYN------P--GYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFL 222 (426)
Q Consensus 151 ~~r~~~~~~~------~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v 222 (426)
.+++.++... . .+..++...+..+....+++...+. +... ....+|+|++|.+++++.+
T Consensus 163 ~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------~~~~g~~~~~P~~~~~~~v 229 (453)
T 3atr_A 163 SFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIF-IDQE------------TSPGGYWWYFPKGKNKVNV 229 (453)
T ss_dssp TTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEE-CCTT------------TSTTSCEEEEEEETTEEEE
T ss_pred hhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEE-ECCC------------CCCCcEEEEEECCCCeEEE
Confidence 9998775432 1 2233344333433222122211111 1000 0113789999999988766
Q ss_pred ecccCcCCCCCC-hHHHHHHHHHHHhhcCCccccccccceEeecCCCCCCCC-CCceeEeeccCCCCCCCCcHHHHHHHH
Q 014377 223 EETSLVARPGVP-MKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVL-PQRVVGIGGTAGMVHPSTGYMVARTLA 300 (426)
Q Consensus 223 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~v~liGdAa~~~~P~~G~G~~~a~~ 300 (426)
+..........+ .+.+.+.+.+..+.+ ...++.+...+.+|.....+.+ .+|++++|||||.++|++|+|++.|++
T Consensus 230 g~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~ 307 (453)
T 3atr_A 230 GLGIQGGMGYPSIHEYYKKYLDKYAPDV--DKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMI 307 (453)
T ss_dssp EEEEESSSCCCCHHHHHHHHHHHHCTTE--EEEEEEEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHhhhhhc--CCCeEEeccceeccCCCCCCceecCCEEEEeCcccCCCCCccccHHHHHH
Confidence 554332222122 233333333322221 1123333344567765554444 689999999999999999999999999
Q ss_pred hcHHHHHHHHHhcCCCCC-CchhhhHHHHHHhcCCHHHHHHHHHHHhHHHHHhCCChhHHHHHHHHhcC---CCcccccc
Q 014377 301 AAPIVANAIVRSLSSDRS-ISGHKLSAEVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFD---LEPRYWHG 376 (426)
Q Consensus 301 ~a~~la~~i~~~l~~~~~-~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~ 376 (426)
||..||++|.+.++.++. ...+..|++.+++.+........ ...+++..+... .|++++. ++...+.+
T Consensus 308 da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~ 379 (453)
T 3atr_A 308 SGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLD----IFRRFLQKLSND----DINYGMKKKIIKEEDLLE 379 (453)
T ss_dssp HHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHTHHHHHHHH----HHHHHHTTCCHH----HHHHHHHTTSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHcCcH----hHHHHHHHcCCChHHHHH
Confidence 999999999988754332 35688899887765543332222 223334444433 3455554 66666777
Q ss_pred c-cCCCCChH
Q 014377 377 F-LSSRLFLP 385 (426)
Q Consensus 377 ~-l~~~~~~~ 385 (426)
| ..++++..
T Consensus 380 ~i~~~~~~~~ 389 (453)
T 3atr_A 380 ASEKGDLHLS 389 (453)
T ss_dssp HHHHCCCCHH
T ss_pred HhhcCCcccc
Confidence 7 67777654
No 4
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=2.2e-33 Score=270.24 Aligned_cols=304 Identities=13% Similarity=0.095 Sum_probs=193.2
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCccc--ch---hHHHhhcCchhhhhh-ccC--CeEEEec
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYG--VW---VDEFEAMDLLDCLDT-TWS--GAVVHID 78 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g--~~---~~~l~~~~~~~~~~~-~~~--~~~~~~~ 78 (426)
++++||+||||||+|+++|+.|++.|++|+|||+.+.+.. ..++ .+ ...++.+|+.+.+.. ..+ ...+...
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~-~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 99 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP-VGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDF 99 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEET
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC-cCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEEC
Confidence 4579999999999999999999999999999999876421 2222 22 234677887654432 222 2222222
Q ss_pred C-CCc-cc---------cCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECC
Q 014377 79 D-NTK-KD---------LDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDAT 146 (426)
Q Consensus 79 ~-~~~-~~---------~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~Ad 146 (426)
. ... .. .......++|..|.+.|.+.+.+ ++++ +++|++++.++++++|++.+|++++||+||+||
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 100 RSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp TTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECC
T ss_pred CCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECC
Confidence 2 110 00 01233468999999999999976 7777 999999999999999999999999999999999
Q ss_pred CCCCcccccc-CCC-CCceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEec
Q 014377 147 GFSRCLVQYD-KPY-NPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEE 224 (426)
Q Consensus 147 G~~s~~r~~~-~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~ 224 (426)
|.+|.+|+.+ +.. ...+.....+...++.+........+..+. . ..+++|++|.+++++.+..
T Consensus 178 G~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~----~~~~~~~~p~~~~~~~~~~ 242 (407)
T 3rp8_A 178 GSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFV-----------G----EGKQVSLMPVSAGRFYFFF 242 (407)
T ss_dssp CTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEE-----------E----TTEEEEEEEETTTEEEEEE
T ss_pred CcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEE-----------C----CCcEEEEEEcCCCeEEEEE
Confidence 9999999987 443 222222222222222111111111111110 0 1378999999998754433
Q ss_pred ccC-cCCCCCChHHHHHHHHHHHhhcCCccccc-------cccceEeecCCCCCCCCCCceeEeeccCCCCCCCCcHHHH
Q 014377 225 TSL-VARPGVPMKDIQERMVARLKHLGIKVRSI-------EEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVA 296 (426)
Q Consensus 225 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~p~~~~~~~~~~~v~liGdAa~~~~P~~G~G~~ 296 (426)
... ......+.+...+.+.+.+..+...+.++ .......+|+........+|++++|||||.++|++|||+|
T Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~ 322 (407)
T 3rp8_A 243 DVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGC 322 (407)
T ss_dssp EEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHH
T ss_pred EeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHH
Confidence 322 11222344456666666665443222211 1111444554333222458999999999999999999999
Q ss_pred HHHHhcHHHHHHHHHhcCCCCCCchhhhHHHHHHh
Q 014377 297 RTLAAAPIVANAIVRSLSSDRSISGHKLSAEVWKD 331 (426)
Q Consensus 297 ~a~~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~~ 331 (426)
.|++||..|+++|.+.. .....+..|++.++.
T Consensus 323 ~al~da~~La~~L~~~~---~~~~~l~~Y~~~r~~ 354 (407)
T 3rp8_A 323 AAMEDAVVLGAVFRQTR---DIAAALREYEAQRCD 354 (407)
T ss_dssp HHHHHHHHHHHHHHSCC---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHH
Confidence 99999999999998532 222456778876553
No 5
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=1.6e-32 Score=269.68 Aligned_cols=308 Identities=12% Similarity=0.069 Sum_probs=199.2
Q ss_pred CCCCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-Ccccchh---HHHhhcCchhhhhhccCCeEEEec
Q 014377 3 DPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP-NNYGVWV---DEFEAMDLLDCLDTTWSGAVVHID 78 (426)
Q Consensus 3 ~~~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~-~~~g~~~---~~l~~~~~~~~~~~~~~~~~~~~~ 78 (426)
...++.++||+||||||+|+++|+.|+++|++|+|||+.+.+... +..+... +.++.+|+.+.+....+.....+.
T Consensus 5 ~~~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~ 84 (500)
T 2qa1_A 5 HHHHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFG 84 (500)
T ss_dssp ---CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEET
T ss_pred cCCccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccc
Confidence 344677899999999999999999999999999999998765322 2222222 346778876544321111111111
Q ss_pred CCC--ccccC--CCc-cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCc---EEEcCEEEECCCCC
Q 014377 79 DNT--KKDLD--RPY-GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGV---TIQAAVVLDATGFS 149 (426)
Q Consensus 79 ~~~--~~~~~--~~~-~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~---~i~a~~vV~AdG~~ 149 (426)
... ..... .++ ..+++..+++.|.+.+.+.|++++ +++|++++.++++++|++.++. +++||+||+|||.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 85 GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred ceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 100 00111 122 347999999999999999999998 9999999999999988887774 89999999999999
Q ss_pred CccccccCCCCCceee-EEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCc
Q 014377 150 RCLVQYDKPYNPGYQV-AYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLV 228 (426)
Q Consensus 150 s~~r~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~ 228 (426)
|.+|+.++....+... ..++...+.... .++.. .+. .. ..++++++|.+++...+......
T Consensus 165 S~VR~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~-~~---------------~~g~~~~~p~~~g~~~~~~~~~~ 226 (500)
T 2qa1_A 165 SSVRKAAGFDFPGTAATMEMYLADIKGVE-LQPRM-IGE-TL---------------PGGMVMVGPLPGGITRIIVCERG 226 (500)
T ss_dssp CHHHHHTTCCCCEECCCCEEEEEEEESCC-CCCEE-EEE-EE---------------TTEEEEEEEETTTEEEEEEEETT
T ss_pred hHHHHHcCCCcCCCccceEEEEEEEEeCC-CCCce-EEE-EC---------------CCcEEEEEEcCCCEEEEEEEcCC
Confidence 9999988665433221 123333333211 11111 110 00 13778999998886443322111
Q ss_pred -----CCCCCChHHHHHHHHHHHhhcCCccccccccceEeecCCCC-CCC-CCCceeEeeccCCCCCCCCcHHHHHHHHh
Q 014377 229 -----ARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGP-LPV-LPQRVVGIGGTAGMVHPSTGYMVARTLAA 301 (426)
Q Consensus 229 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~-~~~~v~liGdAa~~~~P~~G~G~~~a~~~ 301 (426)
.....+.+++.+.+.+.+... ....++. ....++.... ... ..+||+++|||||.++|++|||+|.+++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~--~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~D 303 (500)
T 2qa1_A 227 TPPQRRETPPSWHEVADAWKRLTGDD-IAHAEPV--WVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQD 303 (500)
T ss_dssp CCC-----CCCHHHHHHHHHHHHSCC-CTTSEEE--EEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHH
T ss_pred CCCccccCCCCHHHHHHHHHHhcCCC-CCcccee--EEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHH
Confidence 112346777877777766521 1111111 1123343221 222 35899999999999999999999999999
Q ss_pred cHHHHHHHHHhcCCCCCCchhhhHHHHHHh
Q 014377 302 APIVANAIVRSLSSDRSISGHKLSAEVWKD 331 (426)
Q Consensus 302 a~~la~~i~~~l~~~~~~~~~~~y~~~~~~ 331 (426)
|..|++.|+..+++....+.+..|++.++.
T Consensus 304 A~~La~~La~~~~g~~~~~~L~~Y~~eR~~ 333 (500)
T 2qa1_A 304 AVNLGWKLGAVVNGTATEELLDSYHSERHA 333 (500)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 999999999988654444567889877553
No 6
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=3.4e-32 Score=267.27 Aligned_cols=305 Identities=13% Similarity=0.082 Sum_probs=198.6
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-Ccccchh---HHHhhcCchhhhhhccCCeEEEecCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP-NNYGVWV---DEFEAMDLLDCLDTTWSGAVVHIDDNT 81 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~-~~~g~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (426)
..+++||+||||||+|+++|+.|+++|++|+|||+.+.+... +..+.+. +.++.+|+.+.+....+.....+....
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 88 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRP 88 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEE
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceeccee
Confidence 346799999999999999999999999999999998765322 2222222 346778876544322110011111100
Q ss_pred --cccc--CCCc-cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCc---EEEcCEEEECCCCCCcc
Q 014377 82 --KKDL--DRPY-GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGV---TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 82 --~~~~--~~~~-~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~---~i~a~~vV~AdG~~s~~ 152 (426)
.... ..++ ..+++..+++.|.+.+.+.|++++ +++|++++.++++++|++.++. +++||+||+|||.+|.+
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~V 168 (499)
T 2qa2_A 89 VDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTV 168 (499)
T ss_dssp EEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHH
T ss_pred cccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHH
Confidence 0011 1233 348999999999999999999998 9999999998888989888775 89999999999999999
Q ss_pred ccccCCCCCceee-EEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCc---
Q 014377 153 VQYDKPYNPGYQV-AYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLV--- 228 (426)
Q Consensus 153 r~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~--- 228 (426)
|+.++....+... ..++...+.... .++.. .+. .. ..++++++|.+++...+......
T Consensus 169 R~~lg~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~-~~---------------~~g~~~~~P~~~g~~~~~~~~~~~~~ 230 (499)
T 2qa2_A 169 RKAAGFDFPGTSASREMFLADIRGCE-ITPRP-IGE-TV---------------PLGMVMSAPLGDGVDRIIVCERGAPA 230 (499)
T ss_dssp HHHTTCCCCEECCCCCEEEEEEESCC-CCCEE-EEE-EE---------------TTEEEEEEECSSSCEEEEEEETTCCC
T ss_pred HHHcCCCCCCCCCccEEEEEEEEECC-CCcce-EEE-EC---------------CCeEEEEEEcCCCEEEEEEEecCCCC
Confidence 9988654433211 122223332211 11111 110 00 13778999998876433322111
Q ss_pred --CCCCCChHHHHHHHHHHHhhcCCccccccccceEeecCCCC-CCCC-CCceeEeeccCCCCCCCCcHHHHHHHHhcHH
Q 014377 229 --ARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGP-LPVL-PQRVVGIGGTAGMVHPSTGYMVARTLAAAPI 304 (426)
Q Consensus 229 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~-~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~ 304 (426)
.....+.+++.+.+.+.+... ....++. ....++.... .+.+ .+||+++|||||.++|++|||+|.|++||..
T Consensus 231 ~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~--~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~ 307 (499)
T 2qa2_A 231 RRRTGPPPYQEVAAAWQRLTGQD-ISHGEPV--WVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVN 307 (499)
T ss_dssp CCCSSSCCHHHHHHHHHHHHSCC-CTTCEEE--EEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHhCCC-CCcccee--EEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHH
Confidence 112356777887777766521 1111111 1123343221 2223 5899999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCchhhhHHHHHHh
Q 014377 305 VANAIVRSLSSDRSISGHKLSAEVWKD 331 (426)
Q Consensus 305 la~~i~~~l~~~~~~~~~~~y~~~~~~ 331 (426)
|++.|+..+++....+.+..|++.++.
T Consensus 308 La~~La~~l~g~~~~~~L~~Ye~eR~~ 334 (499)
T 2qa2_A 308 LGWKLAAVVSGRAPAGLLDTYHEERHP 334 (499)
T ss_dssp HHHHHHHHHTTSSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 999999988655444678889877553
No 7
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=2.5e-31 Score=264.48 Aligned_cols=308 Identities=14% Similarity=0.063 Sum_probs=195.9
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCC-CCcccch---hHHHhhcCchhhhhhc-cC----------
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIW-PNNYGVW---VDEFEAMDLLDCLDTT-WS---------- 71 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~-~~~~g~~---~~~l~~~~~~~~~~~~-~~---------- 71 (426)
..++||+||||||+|+++|+.|+++|++|+|||+++.... ++..+.. ...++.+|+.+.+... .+
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIR 82 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEE
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeee
Confidence 3569999999999999999999999999999999876432 1222222 2346677775443221 11
Q ss_pred ------CeEEE-ec-CCC------ccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCC----eEEEEEc
Q 014377 72 ------GAVVH-ID-DNT------KKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEES----KSLLICN 132 (426)
Q Consensus 72 ------~~~~~-~~-~~~------~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~----~~~v~~~ 132 (426)
+..+. .. ... ......++..+++..|.+.|.+.+.+.|++++ +++|++++.+++ ++++++.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~ 162 (535)
T 3ihg_A 83 LAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLA 162 (535)
T ss_dssp EESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEE
T ss_pred EEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEE
Confidence 11111 00 000 00112234568999999999999999999999 999999999988 8888887
Q ss_pred CC---cEEEcCEEEECCCCCCccccccCCCCCcee---eEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCC
Q 014377 133 DG---VTIQAAVVLDATGFSRCLVQYDKPYNPGYQ---VAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKI 206 (426)
Q Consensus 133 ~g---~~i~a~~vV~AdG~~s~~r~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (426)
++ .+++||+||+|||.+|.+|+.++....+.. ....+.+..+.+....+......+... .
T Consensus 163 ~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------p 228 (535)
T 3ihg_A 163 GPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHH--------------P 228 (535)
T ss_dssp ETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEEC--------------S
T ss_pred cCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEEC--------------C
Confidence 76 789999999999999999998865543322 222232222211111111100110000 0
Q ss_pred CcEEEEeeCCCC-eEEEecccCc----CCCCCChHHHHHHHHHHHhhcCCccccccccceEeecCCCC-CCC-CCCceeE
Q 014377 207 PTFLYAMPFSSN-RIFLEETSLV----ARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGP-LPV-LPQRVVG 279 (426)
Q Consensus 207 ~~~~~~~P~~~~-~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~-~~~~v~l 279 (426)
.+..+.+|..++ ...+...... .....+.+++.+.+.+.+....... ++. ....+++... ... ..+|+++
T Consensus 229 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~-~~~--~~~~~~~~~~~a~~~~~grv~L 305 (535)
T 3ihg_A 229 EFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKP-ELV--DIQGWEMAARIAERWREGRVFL 305 (535)
T ss_dssp SCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCC-EEE--EEEEEEEEEEEESCSEETTEEE
T ss_pred CceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCce-eEE--EeeEeeeeEEEECccccCCEEE
Confidence 134566677653 3222111111 1133466777777777665322222 111 1333343221 122 3589999
Q ss_pred eeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCCCCCCchhhhHHHHHHh
Q 014377 280 IGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHKLSAEVWKD 331 (426)
Q Consensus 280 iGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~~ 331 (426)
+|||||.++|++|||+|.|++||..|+++|+..+++......+..|++.++.
T Consensus 306 vGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p 357 (535)
T 3ihg_A 306 AGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKV 357 (535)
T ss_dssp CTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHH
T ss_pred EecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHH
Confidence 9999999999999999999999999999999988765555778899877654
No 8
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=5.9e-32 Score=268.96 Aligned_cols=303 Identities=14% Similarity=0.116 Sum_probs=187.8
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-Ccccch---hHHHhhcCchhhhhhc-cCCeEEEecCC--
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP-NNYGVW---VDEFEAMDLLDCLDTT-WSGAVVHIDDN-- 80 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~-~~~g~~---~~~l~~~~~~~~~~~~-~~~~~~~~~~~-- 80 (426)
+++||+||||||+|+++|+.|++.|++|+|||+.+.+... +..+.. ...++.+|+.+.+... .......+...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 4689999999999999999999999999999998765322 122222 2346777776544321 11000001110
Q ss_pred ---Ccccc--CCCcc-ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE--cCC-cEEEcCEEEECCCCCC
Q 014377 81 ---TKKDL--DRPYG-RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC--NDG-VTIQAAVVLDATGFSR 150 (426)
Q Consensus 81 ---~~~~~--~~~~~-~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~--~~g-~~i~a~~vV~AdG~~s 150 (426)
..... ..++. .+++..+.+.|.+.+.+.|++++ +++|++++.++++++|++ .+| ++++||+||+|||.+|
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 00111 12333 48999999999999998899998 999999999888888887 677 7899999999999999
Q ss_pred ccccccCCCCCceee-EEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEE-eeCCCCeE-EE--ecc
Q 014377 151 CLVQYDKPYNPGYQV-AYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYA-MPFSSNRI-FL--EET 225 (426)
Q Consensus 151 ~~r~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~~~~-~v--~~~ 225 (426)
.+|+.++....+... ..++...+.... +. .. ..+. ....+++++ +|..++.. .+ ...
T Consensus 208 ~vR~~lGi~~~~~~~~~~~~~~~v~~~~-~~-~~--~~~~--------------~~~~G~~~~~~P~~~g~~~~i~~~~~ 269 (570)
T 3fmw_A 208 TVRRLAADRFPGTEATVRALIGYVTTPE-RE-VP--RRWE--------------RTPDGILVLAFPPEGGLGPGWSSSST 269 (570)
T ss_dssp HHHHHTTCCCCCCCCCEEEEEEECCCCS-CS-SC--CCCC--------------CCCSSCEEECCCC------CEEEEEE
T ss_pred hHHHHcCCCCccceeeeEEEEEEEEecC-CC-cc--eEEE--------------ecCCEEEEEEeecCCCeEEEEEEEeC
Confidence 999988654433222 223333332111 11 00 0000 011356666 78887743 22 111
Q ss_pred cCc---CCCCCChHHHHHHHHHHHhhcCCcccccccc-ceEeecCCCCC-CC-CCCceeEeeccCCCCCCCCcHHHHHHH
Q 014377 226 SLV---ARPGVPMKDIQERMVARLKHLGIKVRSIEED-EHCVIPMGGPL-PV-LPQRVVGIGGTAGMVHPSTGYMVARTL 299 (426)
Q Consensus 226 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~-~~-~~~~v~liGdAa~~~~P~~G~G~~~a~ 299 (426)
... .....+.+++.+.+.+.+.. ........ ....+|+.... +. ..+||+++|||||.++|++|||+|.|+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl 346 (570)
T 3fmw_A 270 GHSPAADEGPVTLEDLGAAVARVRGT---PLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGL 346 (570)
T ss_dssp SCC-----CCCCHHHHHHHTTSSSSC---CCCCCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHH
T ss_pred CCCccccccCCCHHHHHHHHHHHhhc---ccccceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHH
Confidence 111 11234556666555443321 11111111 23455654322 22 358999999999999999999999999
Q ss_pred HhcHHHHHHHHHhcCCCCCCchhhhHHHHHHh
Q 014377 300 AAAPIVANAIVRSLSSDRSISGHKLSAEVWKD 331 (426)
Q Consensus 300 ~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~~ 331 (426)
+||..|+++|+..+++......+..|++.++.
T Consensus 347 ~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~ 378 (570)
T 3fmw_A 347 QDAVNLGWKLAARVRGWGSEELLDTYHDERHP 378 (570)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 99999999999888654444567889877553
No 9
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.98 E-value=2.1e-31 Score=263.31 Aligned_cols=325 Identities=16% Similarity=0.157 Sum_probs=194.8
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchh----HHHhhcCchhhhhh-ccC---CeEEEe
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWV----DEFEAMDLLDCLDT-TWS---GAVVHI 77 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~----~~l~~~~~~~~~~~-~~~---~~~~~~ 77 (426)
++.++||+||||||+|+++|+.|++.|++|+|||+.+.+......+.+. ..++.+++.+.+.. ..+ ...+..
T Consensus 4 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~ 83 (512)
T 3e1t_A 4 RPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRW 83 (512)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEEC
T ss_pred CCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEe
Confidence 3456999999999999999999999999999999987543222222222 23556676543321 111 111111
Q ss_pred cCCCc---------cccCCC-ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE---EEEEcCCc--EEEcCE
Q 014377 78 DDNTK---------KDLDRP-YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS---LLICNDGV--TIQAAV 141 (426)
Q Consensus 78 ~~~~~---------~~~~~~-~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~---~v~~~~g~--~i~a~~ 141 (426)
..... .....+ ...++|..|.+.|.+.+.+.|++++ +++|++++.+++.+ .+...+|+ +++||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~ 163 (512)
T 3e1t_A 84 GKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARF 163 (512)
T ss_dssp SSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEE
T ss_pred cCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCE
Confidence 11000 011112 2358999999999999999999999 99999999987754 44455674 899999
Q ss_pred EEECCCCCCccccccCCCC-CceeeEEEEEEEeec---CCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCC
Q 014377 142 VLDATGFSRCLVQYDKPYN-PGYQVAYGILAEVEE---HPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSS 217 (426)
Q Consensus 142 vV~AdG~~s~~r~~~~~~~-~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 217 (426)
||+|||.+|.+++.++... ..+....++...+.. .+.+.....+.. .. ..+|+|.+|..+
T Consensus 164 VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~------------~~----~~G~~~~~Pl~~ 227 (512)
T 3e1t_A 164 IVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSA------------AF----QDGWFWYIPLSD 227 (512)
T ss_dssp EEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEE------------EE----TTEEEEEEECSS
T ss_pred EEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEE------------Ee----CCceEEEEEeCC
Confidence 9999999999999874321 111112233222221 111111111110 00 148999999999
Q ss_pred CeEEEecccC---cCCCCCChHHHHHHHHHHHhhcC---CccccccccceEeecCCC----C-CCCCCCceeEeeccCCC
Q 014377 218 NRIFLEETSL---VARPGVPMKDIQERMVARLKHLG---IKVRSIEEDEHCVIPMGG----P-LPVLPQRVVGIGGTAGM 286 (426)
Q Consensus 218 ~~~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~----~-~~~~~~~v~liGdAa~~ 286 (426)
+++.++.... ......+.++..+.+.+..+... .....+.....+.+++.. . ...+.+|++++|||||+
T Consensus 228 ~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~ 307 (512)
T 3e1t_A 228 TLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACF 307 (512)
T ss_dssp SEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEE
T ss_pred CeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhc
Confidence 8755443321 11111133333333322211110 000111111111122111 1 12356899999999999
Q ss_pred CCCCCcHHHHHHHHhcHHHHHHHHHhcCCCCCC-chhhhHHHHHHhcCCHHHHHHHHHHHh
Q 014377 287 VHPSTGYMVARTLAAAPIVANAIVRSLSSDRSI-SGHKLSAEVWKDLWPIERRRQREFFCF 346 (426)
Q Consensus 287 ~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~ 346 (426)
++|++|+|++.|++||..||+.|.+.+.+.... ..+..|++.++..+...+.+...+|..
T Consensus 308 ~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~ 368 (512)
T 3e1t_A 308 VDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFYQFLVAFYDM 368 (512)
T ss_dssp CCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999988654332 346789988777666555555555543
No 10
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.98 E-value=7.3e-31 Score=253.82 Aligned_cols=310 Identities=15% Similarity=0.158 Sum_probs=185.6
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccc---hhHHHhhcCchhhhhhc-c---CCeEEE---
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGV---WVDEFEAMDLLDCLDTT-W---SGAVVH--- 76 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~---~~~~l~~~~~~~~~~~~-~---~~~~~~--- 76 (426)
++++||+||||||+|+++|+.|++.|++|+|+|+.+.+......+. ....++.+++.+.+... + .+..+.
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCC
Confidence 3469999999999999999999999999999999875432221111 22346666765433211 1 111111
Q ss_pred ----ecCCCcccc-CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE--EEEEcCCc--EEEcCEEEECC
Q 014377 77 ----IDDNTKKDL-DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS--LLICNDGV--TIQAAVVLDAT 146 (426)
Q Consensus 77 ----~~~~~~~~~-~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~--~v~~~~g~--~i~a~~vV~Ad 146 (426)
+........ ......++|..|.+.|.+.+.+.|++++ +++|++++.+++++ .+.+.+|+ +++||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~ 162 (421)
T 3nix_A 83 EIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDAS 162 (421)
T ss_dssp EEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECC
T ss_pred eeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECC
Confidence 111000000 1112358999999999999998999999 99999999887764 45567887 79999999999
Q ss_pred CCCCccccccCCCCCce-eeEEEEEEEeecC----CCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEE
Q 014377 147 GFSRCLVQYDKPYNPGY-QVAYGILAEVEEH----PFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIF 221 (426)
Q Consensus 147 G~~s~~r~~~~~~~~~~-~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 221 (426)
|.+|.+++.++...... .....+...+... .++.+...+.... ....+|+|.+|.+++++.
T Consensus 163 G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~g~~~~~P~~~~~~~ 228 (421)
T 3nix_A 163 GYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVV--------------HKPKVWIWVIPFSNGNTS 228 (421)
T ss_dssp GGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEE--------------EETTEEEEEEECTTSEEE
T ss_pred CCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEe--------------CCCCEEEEEEEECCCCEE
Confidence 99999887765422110 1111222222211 1111111111000 001489999999999866
Q ss_pred EecccCcC---CCCCChHHHHHHHHHHHhhcCCccccc-cccceEeecCCC-CC-CCCCCceeEeeccCCCCCCCCcHHH
Q 014377 222 LEETSLVA---RPGVPMKDIQERMVARLKHLGIKVRSI-EEDEHCVIPMGG-PL-PVLPQRVVGIGGTAGMVHPSTGYMV 295 (426)
Q Consensus 222 v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~-~~-~~~~~~v~liGdAa~~~~P~~G~G~ 295 (426)
++...... ....+.++..+.+.+..+.....+... .......++... .. +.+.++++++|||||+++|++|+|+
T Consensus 229 vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~ 308 (421)
T 3nix_A 229 VGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGA 308 (421)
T ss_dssp EEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHH
T ss_pred EEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCcccccH
Confidence 55442211 111244444444333222110001110 111223333221 12 2346899999999999999999999
Q ss_pred HHHHHhcHHHHHHHHHhcCCCCCCchhhhHHHHHHh
Q 014377 296 ARTLAAAPIVANAIVRSLSSDRSISGHKLSAEVWKD 331 (426)
Q Consensus 296 ~~a~~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~~ 331 (426)
+.|+.+|..+|+.|.+.+.+++. .....|++.++.
T Consensus 309 ~~A~~~a~~la~~l~~~~~~~~~-~~~~~y~~~~~~ 343 (421)
T 3nix_A 309 TFAMESGSKGGKLAVQFLKGEEV-NWEKDFVEHMMQ 343 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCch-hHHHHHHHHHHH
Confidence 99999999999999998875432 345556655443
No 11
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.98 E-value=1.2e-30 Score=264.08 Aligned_cols=306 Identities=14% Similarity=0.122 Sum_probs=195.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHH-----CCCcEEEEcCCCCCCCC-Ccccch---hHHHhhcCchhhhhh-ccCC--eEE
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSE-----AGLSVCSIDPSPKLIWP-NNYGVW---VDEFEAMDLLDCLDT-TWSG--AVV 75 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~-----~G~~V~liE~~~~~~~~-~~~g~~---~~~l~~~~~~~~~~~-~~~~--~~~ 75 (426)
.++||+||||||+|+++|+.|++ .|++|+|||+.+.+... +..+.+ .+.|+.+|+.+.+.. ..+. ..+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~ 86 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEE
Confidence 36899999999999999999999 99999999998754322 222333 234778888654432 2221 122
Q ss_pred EecCCCcc------------cc-CCCccccCHHHHHHHHHHHHHhCC---cEEE-EEEEEEEEEeC--------CeEEEE
Q 014377 76 HIDDNTKK------------DL-DRPYGRVNRKLLKSKMLQKCITNG---VKFH-QAKVIKVIHEE--------SKSLLI 130 (426)
Q Consensus 76 ~~~~~~~~------------~~-~~~~~~v~r~~l~~~L~~~~~~~g---v~~~-~~~v~~i~~~~--------~~~~v~ 130 (426)
........ .. ..+...+++..+++.|.+.+.+.| +++. +++|++++.++ .+++|+
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~ 166 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMT 166 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEE
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEE
Confidence 21111000 00 112334899999999999998866 8998 99999998865 357665
Q ss_pred Ec------------------------------------------CC--cEEEcCEEEECCCCCCccccccCCCCCceee-
Q 014377 131 CN------------------------------------------DG--VTIQAAVVLDATGFSRCLVQYDKPYNPGYQV- 165 (426)
Q Consensus 131 ~~------------------------------------------~g--~~i~a~~vV~AdG~~s~~r~~~~~~~~~~~~- 165 (426)
+. +| ++++||+||+|||.+|.+|++++....+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~ 246 (665)
T 1pn0_A 167 LRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTD 246 (665)
T ss_dssp EEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEE
T ss_pred EEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCcc
Confidence 43 35 5799999999999999999988765543322
Q ss_pred -EEEEEEEee-cCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEe--cccCc------CCCCCCh
Q 014377 166 -AYGILAEVE-EHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLE--ETSLV------ARPGVPM 235 (426)
Q Consensus 166 -~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~--~~~~~------~~~~~~~ 235 (426)
.+++ +.+. ...++........+. ...++++++|..++.+.+. ..... .....+.
T Consensus 247 ~~~~v-~d~~~~~~~p~~~~~~~~~~---------------~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~ 310 (665)
T 1pn0_A 247 YIWGV-LDAVPASNFPDIRSRCAIHS---------------AESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTP 310 (665)
T ss_dssp EEEEE-EEEEEECCCTTTTSEEEEEC---------------SSSCEEEEEECSTTCEEEEEEECC----------CCCCH
T ss_pred EEEEE-EEEEECCCCCCcceEEEEEe---------------CCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCH
Confidence 2222 1111 111111110010000 0136788899988754322 11111 1233567
Q ss_pred HHHHHHHHHHHhhcCCccccccccceEeecCCCC-CCCC--CCceeEeeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHh
Q 014377 236 KDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGP-LPVL--PQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRS 312 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~--~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~ 312 (426)
+++.+.+.+.+......+..+.. ...+++... .+.| .+||+|+|||||.++|++|||+|.||+||.+|++.|+..
T Consensus 311 e~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~v 388 (665)
T 1pn0_A 311 EVVIANAKKIFHPYTFDVQQLDW--FTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLV 388 (665)
T ss_dssp HHHHHHHHHHHTTSCCEEEEEEE--EEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccCceeeEEE--EEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHH
Confidence 77887777766543333322221 233343221 2233 489999999999999999999999999999999999998
Q ss_pred cCCCCCCchhhhHHHHHHh
Q 014377 313 LSSDRSISGHKLSAEVWKD 331 (426)
Q Consensus 313 l~~~~~~~~~~~y~~~~~~ 331 (426)
+++....+.+..|++.++.
T Consensus 389 l~g~a~~~lL~tYe~eR~p 407 (665)
T 1pn0_A 389 LTGRAKRDILKTYEEERQP 407 (665)
T ss_dssp HTTCBCGGGGHHHHHHHHH
T ss_pred HcCCCcHHHHHHHHHHHHH
Confidence 8765444678899877653
No 12
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.97 E-value=3.3e-30 Score=260.65 Aligned_cols=304 Identities=16% Similarity=0.183 Sum_probs=190.9
Q ss_pred CcCcEEEECchHHHHHHHHHHHH-CCCcEEEEcCCCCCCCC-Ccccch---hHHHhhcCchhhhhh-c--cCCeEEEecC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSE-AGLSVCSIDPSPKLIWP-NNYGVW---VDEFEAMDLLDCLDT-T--WSGAVVHIDD 79 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~-~G~~V~liE~~~~~~~~-~~~g~~---~~~l~~~~~~~~~~~-~--~~~~~~~~~~ 79 (426)
.++||+||||||+|+++|+.|++ .|++|+|||+.+.+... +..+.+ .+.++.+|+.+.+.. . .....+...+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 46899999999999999999999 99999999998764322 222333 234677777654321 1 1111111110
Q ss_pred ----CC-----------ccccCCCccccCHHHHHHHHHHHHHhCCc--EEE-EEEEEEEEEeCC----eEEEEEc-----
Q 014377 80 ----NT-----------KKDLDRPYGRVNRKLLKSKMLQKCITNGV--KFH-QAKVIKVIHEES----KSLLICN----- 132 (426)
Q Consensus 80 ----~~-----------~~~~~~~~~~v~r~~l~~~L~~~~~~~gv--~~~-~~~v~~i~~~~~----~~~v~~~----- 132 (426)
.. ......+...+++..+.+.|.+.+.+.|+ +++ +++|++++.+++ +++|++.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 00 00011223358999999999999999876 888 999999998753 5777654
Q ss_pred -CC--cEEEcCEEEECCCCCCccccccCCCCCc--eeeEEEEEEEeecCCCCC-CceeeeecCCCcCCCchhhhccCCCC
Q 014377 133 -DG--VTIQAAVVLDATGFSRCLVQYDKPYNPG--YQVAYGILAEVEEHPFDL-DKMVFMDWRDSHLNNNSELKEANSKI 206 (426)
Q Consensus 133 -~g--~~i~a~~vV~AdG~~s~~r~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (426)
+| .+++||+||+|||.+|.+|+.++....+ ....+++.-......++. ....... . .
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~-------------~----~ 253 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQ-------------S----E 253 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEEE-------------E----T
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEEE-------------c----C
Confidence 45 5799999999999999999987654322 111222211111011111 0111010 0 1
Q ss_pred CcEEEEeeCCCC-eEEE--eccc--Cc---CCCCCChHHHHHHHHHHHhhcCCccccccccceEeecCCCCC-CC-----
Q 014377 207 PTFLYAMPFSSN-RIFL--EETS--LV---ARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPL-PV----- 272 (426)
Q Consensus 207 ~~~~~~~P~~~~-~~~v--~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~----- 272 (426)
.++++++|..++ .+.+ .... .. .....+.+++.+.+.+.+......+..+.. ...+++.... ..
T Consensus 254 ~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~ 331 (639)
T 2dkh_A 254 QGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLEVKNVPW--WSVYEIGQRICAKYDDVV 331 (639)
T ss_dssp TEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCEEEEEEEE--EEEECCCCEECSCSBSCC
T ss_pred CceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCcceeeeE--EEecccccchhhhhhccc
Confidence 377899999887 4322 2111 00 122346777777776666543222222211 1233332111 11
Q ss_pred --------CCCceeEeeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCCCCCCchhhhHHHHHH
Q 014377 273 --------LPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHKLSAEVWK 330 (426)
Q Consensus 273 --------~~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~ 330 (426)
..+||+++|||||.++|++|||+|.||+||..|++.|+..+++....+.+..|++.++
T Consensus 332 ~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~eR~ 397 (639)
T 2dkh_A 332 DAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSERQ 397 (639)
T ss_dssp CSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHHHH
T ss_pred cccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 2689999999999999999999999999999999999998876544467888987765
No 13
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.97 E-value=4.8e-31 Score=253.24 Aligned_cols=301 Identities=17% Similarity=0.135 Sum_probs=188.5
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccc--h---hHHHhhcCchhhhhh---ccCCeEEEec
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGV--W---VDEFEAMDLLDCLDT---TWSGAVVHID 78 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~--~---~~~l~~~~~~~~~~~---~~~~~~~~~~ 78 (426)
..++||+||||||+|+++|+.|++.|++|+|||+.+... ...++. + ...++.+++.+.+.. ......+...
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~-~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 82 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRER-AINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYH 82 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC----CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCC-ccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeC
Confidence 346899999999999999999999999999999987541 222222 2 134666776544321 1111111111
Q ss_pred CCCc-cc-----c-CCCc-cccCHHHHHHHHHHHHHhC-CcEEE-EEEEEEEEEeCCeE--EEEEcCCcEEEcCEEEECC
Q 014377 79 DNTK-KD-----L-DRPY-GRVNRKLLKSKMLQKCITN-GVKFH-QAKVIKVIHEESKS--LLICNDGVTIQAAVVLDAT 146 (426)
Q Consensus 79 ~~~~-~~-----~-~~~~-~~v~r~~l~~~L~~~~~~~-gv~~~-~~~v~~i~~~~~~~--~v~~~~g~~i~a~~vV~Ad 146 (426)
.... .. . ...+ ..++|..|.+.|.+.+.+. |++++ +++|++++.+++++ .|++.+|++++||+||+||
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~Ad 162 (399)
T 2x3n_A 83 DGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGAD 162 (399)
T ss_dssp TTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECC
T ss_pred CCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECC
Confidence 1100 00 0 0112 2489999999999999886 99999 99999999888888 8999999899999999999
Q ss_pred CCCCccccccCCCCCce---eeE--EEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEE
Q 014377 147 GFSRCLVQYDKPYNPGY---QVA--YGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIF 221 (426)
Q Consensus 147 G~~s~~r~~~~~~~~~~---~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 221 (426)
|.+|.+|+.++...... ... .++...++.. .+ .. . +.+ .+. .+++|.+|.+++.+.
T Consensus 163 G~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~-~~-~~-~-~~~-~~~--------------~~~~~~~p~~~~~~~ 223 (399)
T 2x3n_A 163 GIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV-AE-RN-R-LYV-DSQ--------------GGLAYFYPIGFDRAR 223 (399)
T ss_dssp CTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH-HH-CE-E-EEE-CTT--------------SCEEEEEEETTTEEE
T ss_pred CCChHHHHHhCCCccccCCCCCCceEEEEEEecCC-CC-Cc-c-EEE-cCC--------------CcEEEEEEcCCCEEE
Confidence 99999998775432211 111 3333333211 01 11 1 111 000 267888998876654
Q ss_pred EecccCcCC-----CCCChHHHHHHHHHHHhhcCCcc--cccccc---ceEeecCCC--CCCC-CCCceeEeeccCCCCC
Q 014377 222 LEETSLVAR-----PGVPMKDIQERMVARLKHLGIKV--RSIEED---EHCVIPMGG--PLPV-LPQRVVGIGGTAGMVH 288 (426)
Q Consensus 222 v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~p~~~--~~~~-~~~~v~liGdAa~~~~ 288 (426)
+........ ...+.+++.+. +..+...+ ..+... ....+|+.. ..+. ..+|++++|||||.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~ 299 (399)
T 2x3n_A 224 LVVSFPREEARELMADTRGESLRRR----LQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVH 299 (399)
T ss_dssp EEEECCHHHHHHHHHSTTSHHHHHH----HHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECC
T ss_pred EEEEeCccccccccccCCHHHHHHH----HhhcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCC
Confidence 333110000 00233344433 33333333 122111 234556543 2233 3589999999999999
Q ss_pred CCCcHHHHHHHHhcHHHHHHHHHhcCCCCC-CchhhhHHHHHHh
Q 014377 289 PSTGYMVARTLAAAPIVANAIVRSLSSDRS-ISGHKLSAEVWKD 331 (426)
Q Consensus 289 P~~G~G~~~a~~~a~~la~~i~~~l~~~~~-~~~~~~y~~~~~~ 331 (426)
|++|||+|.|++||..||+.|.+.++.+.. ...+..|++.++.
T Consensus 300 P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~ 343 (399)
T 2x3n_A 300 PITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFP 343 (399)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcc
Confidence 999999999999999999999988764322 2457788876553
No 14
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.97 E-value=4.6e-30 Score=245.97 Aligned_cols=303 Identities=13% Similarity=0.153 Sum_probs=182.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC---CCCCcccch---hHHHhhcCchhhhhh---ccCCeEEEecC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL---IWPNNYGVW---VDEFEAMDLLDCLDT---TWSGAVVHIDD 79 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~---~~~~~~g~~---~~~l~~~~~~~~~~~---~~~~~~~~~~~ 79 (426)
++||+||||||+|+++|+.|++.|++|+|+|+.+.+ ........+ ...++.+|+.+.+.. ......+....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 589999999999999999999999999999998742 111111122 234677777654332 12222222211
Q ss_pred CCcccc-------CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeC-CeEEEEE-cCCc--EEEcCEEEECCC
Q 014377 80 NTKKDL-------DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEE-SKSLLIC-NDGV--TIQAAVVLDATG 147 (426)
Q Consensus 80 ~~~~~~-------~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~-~~~~v~~-~~g~--~i~a~~vV~AdG 147 (426)
. ...+ ......+++..+.+.|.+.+.+.|++++ +++|++++.++ +.+.|++ .+|+ +++||+||+|||
T Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 82 Q-RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDG 160 (394)
T ss_dssp E-EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCC
T ss_pred c-eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCC
Confidence 1 0000 1122346899999999999988999999 99999998763 4577777 6886 799999999999
Q ss_pred CCCccccccCCCCC-ceeeE--EEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEec
Q 014377 148 FSRCLVQYDKPYNP-GYQVA--YGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEE 224 (426)
Q Consensus 148 ~~s~~r~~~~~~~~-~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~ 224 (426)
.+|.+|+.++.... .+... +++.......+.......+. . ...+|.|..|.+++...+..
T Consensus 161 ~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------~~~g~~~~~~~~~~~~~~~~ 223 (394)
T 1k0i_A 161 FHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYA---N--------------HPRGFALCSQRSATRSQYYV 223 (394)
T ss_dssp TTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEE---C--------------CTTCCEEEEEEETTEEEEEE
T ss_pred CCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEE---E--------------cCCceEEEEecCCCcEEEEE
Confidence 99999988754321 11111 22221111111111111110 0 01256666666555432221
Q ss_pred ccCc--CCCCCChHHHHHHHHHHHhhc-CCccccccccceEeecCCCC--CCCCCCceeEeeccCCCCCCCCcHHHHHHH
Q 014377 225 TSLV--ARPGVPMKDIQERMVARLKHL-GIKVRSIEEDEHCVIPMGGP--LPVLPQRVVGIGGTAGMVHPSTGYMVARTL 299 (426)
Q Consensus 225 ~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~--~~~~~~~v~liGdAa~~~~P~~G~G~~~a~ 299 (426)
.... ....++.++..+.+.+.+... ...+..........+|+... .+...+|++++|||||.++|++|||+|.|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai 303 (394)
T 1k0i_A 224 QVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAA 303 (394)
T ss_dssp EECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHH
T ss_pred EeCCCCCccccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHH
Confidence 1111 112234555555555544331 10111000112233443221 122358999999999999999999999999
Q ss_pred HhcHHHHHHHHHhcCCCCCCchhhhHHHHHH
Q 014377 300 AAAPIVANAIVRSLSSDRSISGHKLSAEVWK 330 (426)
Q Consensus 300 ~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~ 330 (426)
+||..||++|.+.++.+. ...+..|++.++
T Consensus 304 ~da~~La~~L~~~~~~~~-~~~L~~Y~~~r~ 333 (394)
T 1k0i_A 304 SDVSTLYRLLLKAYREGR-GELLERYSAICL 333 (394)
T ss_dssp HHHHHHHHHHHHHHHHCC-GGGGGGHHHHHH
T ss_pred HHHHHHHHHHHHHhccCc-hHHHHHHHHHHH
Confidence 999999999998764332 357788987654
No 15
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.97 E-value=2.2e-30 Score=249.65 Aligned_cols=315 Identities=12% Similarity=0.164 Sum_probs=174.6
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-Ccccc--h---hHHHhhcCchhhhhh-----cc-C-CeEEE
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP-NNYGV--W---VDEFEAMDLLDCLDT-----TW-S-GAVVH 76 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~-~~~g~--~---~~~l~~~~~~~~~~~-----~~-~-~~~~~ 76 (426)
.+|+||||||+||++|+.|+++|++|+||||++.+... ...+. + ...|+.+++.+.+.. .. . ...+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 47999999999999999999999999999998765321 12222 1 234666776543211 00 0 01111
Q ss_pred ecCCC--------c----cccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeC-CeEEEEEcCCcEEEcCEE
Q 014377 77 IDDNT--------K----KDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEE-SKSLLICNDGVTIQAAVV 142 (426)
Q Consensus 77 ~~~~~--------~----~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~-~~~~v~~~~g~~i~a~~v 142 (426)
..... . .....++..|+|..|.+.|.+.+. ..++ +++|++++..+ +.++|+++||++++||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~---~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlv 158 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLA---NTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVL 158 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCT---TTEECSCCEEEEEECTTSCEEEEETTSCEEEESEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhcc---ceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEE
Confidence 00000 0 011122335899999999987553 3456 89999998764 468999999999999999
Q ss_pred EECCCCCCccccccCCCCCceeeEEE-EEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCC---
Q 014377 143 LDATGFSRCLVQYDKPYNPGYQVAYG-ILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSN--- 218 (426)
Q Consensus 143 V~AdG~~s~~r~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~--- 218 (426)
|+|||.+|.+|+.+.+.......... +.......+. ........+........ +...........|..|....
T Consensus 159 VgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 235 (412)
T 4hb9_A 159 VGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPA-LTALLPQNFRDGTPNSI--VPKSPDWLFISMWRAPVNIHVEA 235 (412)
T ss_dssp EECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHH-HHHHSCGGGTSSCCEEE--CCSSSEEEEEEEEEEESCTTSCG
T ss_pred EECCCCCcchHHHhCCCccccccceeEEEEEEecchh-hhcchhhhhccCCcceE--eecCCCcceeeeeecCCceeEEE
Confidence 99999999999987665443222221 2112111000 00000000000000000 00000000001122222110
Q ss_pred -------e-EEEe--cccC--cCCCCCChHHHHHHHHHHHhhcCCcccccc----ccceEeecCC--CCCCC-CCCceeE
Q 014377 219 -------R-IFLE--ETSL--VARPGVPMKDIQERMVARLKHLGIKVRSIE----EDEHCVIPMG--GPLPV-LPQRVVG 279 (426)
Q Consensus 219 -------~-~~v~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~--~~~~~-~~~~v~l 279 (426)
. .++. .... ......+.+.+.+.+.+.+..+...+.+++ ......+++. ...+. ..+||+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~grv~L 315 (412)
T 4hb9_A 236 SLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKSSTVTL 315 (412)
T ss_dssp GGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCCCSEEE
T ss_pred eccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccccCEEE
Confidence 0 1111 1100 011233556666777666654432222211 1111111111 12223 4689999
Q ss_pred eeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCCCCC-CchhhhHHHHHH
Q 014377 280 IGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRS-ISGHKLSAEVWK 330 (426)
Q Consensus 280 iGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~~-~~~~~~y~~~~~ 330 (426)
+|||||.++|++|||+|+|++||..||++|++.+.+.++ ...+..|++.++
T Consensus 316 iGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R~ 367 (412)
T 4hb9_A 316 LGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQMR 367 (412)
T ss_dssp CTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred EEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998876554 345788987654
No 16
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.97 E-value=1.4e-29 Score=251.82 Aligned_cols=300 Identities=13% Similarity=0.133 Sum_probs=185.9
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-Ccccch---hHHHhhcCchhhhhhc-cCC----eEEEe
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP-NNYGVW---VDEFEAMDLLDCLDTT-WSG----AVVHI 77 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~-~~~g~~---~~~l~~~~~~~~~~~~-~~~----~~~~~ 77 (426)
+.++||+||||||+|+++|+.|++.|++|+|||+.+.+... +..+.. .+.++.+|+.+.+... .+. .....
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 103 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWV 103 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEe
Confidence 34689999999999999999999999999999998765321 122222 2346667765433211 110 01111
Q ss_pred c-----------CCCc----c--ccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcC---C--
Q 014377 78 D-----------DNTK----K--DLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICND---G-- 134 (426)
Q Consensus 78 ~-----------~~~~----~--~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~---g-- 134 (426)
. .... . ....++..+++..+++.|.+.+.+. ++ +++|++++.+++++++++.+ |
T Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~ 180 (549)
T 2r0c_A 104 TRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGAT 180 (549)
T ss_dssp SSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCE
T ss_pred ccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCE
Confidence 1 0000 0 0112234589999999999999876 66 99999999988888887765 6
Q ss_pred cEEEcCEEEECCCCCCccccccCCCCCce---eeEEEEEEEeecCCCC---CCceeeeecCCCcCCCchhhhccCCCCCc
Q 014377 135 VTIQAAVVLDATGFSRCLVQYDKPYNPGY---QVAYGILAEVEEHPFD---LDKMVFMDWRDSHLNNNSELKEANSKIPT 208 (426)
Q Consensus 135 ~~i~a~~vV~AdG~~s~~r~~~~~~~~~~---~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (426)
.+++||+||+|||.+|.+|+.++....+. +.+... .+..+... ......+.+ +...+ .+
T Consensus 181 ~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----------~~~p~---~~ 245 (549)
T 2r0c_A 181 RAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNI--LFRAPELRSLLGERAALFFF----------LMLSS---SL 245 (549)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEE--EEECTTHHHHHGGGCCSEEE----------EEEET---TE
T ss_pred EEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEE--EEECCchHHhcCCCCceEEE----------EECCC---Cc
Confidence 47999999999999999999876544332 222222 22221110 000000000 00000 14
Q ss_pred EEEEeeCCCCe-EEEecccCcCCCCCChHHHHHHHHHHHhhcCCccccccccceEeecCCCC-CCCC-CCceeEeeccCC
Q 014377 209 FLYAMPFSSNR-IFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGP-LPVL-PQRVVGIGGTAG 285 (426)
Q Consensus 209 ~~~~~P~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~-~~~v~liGdAa~ 285 (426)
+++++|..++. ..+... ..... .+.+++.+.+.+.+.. .... ++.. ...+++... ...+ .+||+++|||||
T Consensus 246 ~~~~~p~~~~~~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~-~~~~-~~~~--~~~~~~~~~~a~~~~~grv~L~GDAAH 319 (549)
T 2r0c_A 246 RFPLRALDGRGLYRLTVG-VDDAS-KSTMDSFELVRRAVAF-DTEI-EVLS--DSEWHLTHRVADSFSAGRVFLTGDAAH 319 (549)
T ss_dssp EEEEEESSSSSEEEEEEE-CSTTC-CSCCCHHHHHHHHBCS-CCCC-EEEE--EEEEEECCEECSCSEETTEEECGGGTE
T ss_pred EEEEEEECCCcEEEEEec-CCCCC-CCHHHHHHHHHHHhCC-CCce-eEEE--EecchhHhhhHHhhcCCcEEEEccccc
Confidence 56777876543 222111 11111 4556677777766643 1211 2221 223343322 2233 589999999999
Q ss_pred CCCCCCcHHHHHHHHhcHHHHHHHHHhcCCCCCCchhhhHHHHHH
Q 014377 286 MVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHKLSAEVWK 330 (426)
Q Consensus 286 ~~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~ 330 (426)
.++|++|||+|.+++||..|++.|+..+++....+.+..|++.++
T Consensus 320 ~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~ 364 (549)
T 2r0c_A 320 TLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERR 364 (549)
T ss_dssp ECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHH
T ss_pred cCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999998865444467889987765
No 17
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.97 E-value=2.8e-30 Score=257.31 Aligned_cols=323 Identities=14% Similarity=0.142 Sum_probs=195.1
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccch---hHHHhhcCchhhhhhc-c---CCeEEEec
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVW---VDEFEAMDLLDCLDTT-W---SGAVVHID 78 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~---~~~l~~~~~~~~~~~~-~---~~~~~~~~ 78 (426)
+|+++||+||||||+|+++|+.|++.|++|+|||+.+.+......+.+ ...++.+|+.+.+... + ....+...
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 99 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWG 99 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEec
Confidence 345799999999999999999999999999999998754332222222 2346677775543321 1 11111111
Q ss_pred C-----------CCccccCCCc-cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEe-CCeEEEEEc-CC--cEEEcCE
Q 014377 79 D-----------NTKKDLDRPY-GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHE-ESKSLLICN-DG--VTIQAAV 141 (426)
Q Consensus 79 ~-----------~~~~~~~~~~-~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~~~v~~~-~g--~~i~a~~ 141 (426)
. ........++ ..+++..|.+.|.+.+.+.|++++ +++|++++.+ ++.+.|++. +| .+++||+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~Adl 179 (591)
T 3i3l_A 100 QDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDF 179 (591)
T ss_dssp SSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESE
T ss_pred CCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCE
Confidence 1 0000011122 258999999999999999999999 9999999876 556777776 66 5899999
Q ss_pred EEECCCCCCccccccCCCCCc-eeeEEEEEEEeecC---CCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCC
Q 014377 142 VLDATGFSRCLVQYDKPYNPG-YQVAYGILAEVEEH---PFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSS 217 (426)
Q Consensus 142 vV~AdG~~s~~r~~~~~~~~~-~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 217 (426)
||+|||.+|.+++.++..... ......+....... +.+.....+..+ ...+|+|.+|..+
T Consensus 180 VV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~----------------~~~G~~w~iPl~~ 243 (591)
T 3i3l_A 180 VIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSIT----------------FEDGWVWMIPIKD 243 (591)
T ss_dssp EEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEE----------------ETTEEEEEEECSS
T ss_pred EEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEE----------------cCCcEEEEEECCC
Confidence 999999999998876543211 11112222212111 111111111110 0148999999998
Q ss_pred CeEEEecccCcCCC----CCChHHHHHHHHHHHhhcCCccccc-cccceEeec-CCCC-CCCCCCceeEeeccCCCCCCC
Q 014377 218 NRIFLEETSLVARP----GVPMKDIQERMVARLKHLGIKVRSI-EEDEHCVIP-MGGP-LPVLPQRVVGIGGTAGMVHPS 290 (426)
Q Consensus 218 ~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p-~~~~-~~~~~~~v~liGdAa~~~~P~ 290 (426)
+.+.+......... ..+.+++.+.+.+..+.....+... .......++ .... ...+.+|++++|||||.++|+
T Consensus 244 ~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl 323 (591)
T 3i3l_A 244 DLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPL 323 (591)
T ss_dssp SEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGGGTCBCCGG
T ss_pred CeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEecccccchhhcccCCEEEEccccccCCCc
Confidence 87655443221110 1122333333322222110000000 001111111 1111 223568999999999999999
Q ss_pred CcHHHHHHHHhcHHHHHHHHHhcCCCCCC-chhhhHHHHHHhcCCHHHHHHHHHH
Q 014377 291 TGYMVARTLAAAPIVANAIVRSLSSDRSI-SGHKLSAEVWKDLWPIERRRQREFF 344 (426)
Q Consensus 291 ~G~G~~~a~~~a~~la~~i~~~l~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~ 344 (426)
+|+|++.|++||..||++|.+.+.+.+.. ..+..|++.++..|...+.....+|
T Consensus 324 ~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 324 FSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887654332 3467788888777666666665665
No 18
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.97 E-value=2.8e-29 Score=240.66 Aligned_cols=309 Identities=13% Similarity=0.129 Sum_probs=179.2
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC---Ccccch----hHHHhhcCchhhhhhc-cCCe-EEE
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP---NNYGVW----VDEFEAMDLLDCLDTT-WSGA-VVH 76 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~---~~~g~~----~~~l~~~~~~~~~~~~-~~~~-~~~ 76 (426)
+++++||+||||||+|+++|+.|++.|++|+|||+.+.+... ..+..+ ...++.+++.+.+... .+.. .+.
T Consensus 23 ~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~ 102 (398)
T 2xdo_A 23 LLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIA 102 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEE
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEE
Confidence 346789999999999999999999999999999998754221 111111 2346777776544321 1111 111
Q ss_pred ecCCCc-------cccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCC
Q 014377 77 IDDNTK-------KDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGF 148 (426)
Q Consensus 77 ~~~~~~-------~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~ 148 (426)
...+.. ......+..++|..|.+.|.+.+.+ ++++ +++|++++.++++++|++.+|++++||+||+|||.
T Consensus 103 ~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 103 DEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp CSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred CCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 111100 0001122358999999999987753 5666 99999999888889999999989999999999999
Q ss_pred CCccccccCCCCCceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEeccc--
Q 014377 149 SRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETS-- 226 (426)
Q Consensus 149 ~s~~r~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~-- 226 (426)
+|.+|+.+......+.....+...+...... ...+..+.. ......... ...+...|.+++.+.+....
T Consensus 181 ~S~vR~~l~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~---~g~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~ 251 (398)
T 2xdo_A 181 MSKVRKFVTDTEVEETGTFNIQADIHQPEIN--CPGFFQLCN---GNRLMASHQ----GNLLFANPNNNGALHFGISFKT 251 (398)
T ss_dssp TCSCCTTTCCCCCEEEEEEEEEEEESSHHHH--SHHHHHHHT---TSEEEEEET----TEEEEEEEEETTEEEEEEEEEC
T ss_pred chhHHhhccCCCceEcceEEEEEEeCchhcc--CchhHhhcC---CceEEEecC----CCeEEEEeCCCCcEEEEEEEec
Confidence 9999998764333222122222222110000 000000000 000000000 12344456666654322110
Q ss_pred -CcC-----CCCCChHHHHHHHHHHHhhcCCccccc-------cccceEeecCCCCCCCC--CC--ceeEeeccCCCCCC
Q 014377 227 -LVA-----RPGVPMKDIQERMVARLKHLGIKVRSI-------EEDEHCVIPMGGPLPVL--PQ--RVVGIGGTAGMVHP 289 (426)
Q Consensus 227 -~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~p~~~~~~~~--~~--~v~liGdAa~~~~P 289 (426)
... ....+.++..+.+.+.+..+...+.++ .......+|.. ..| .+ |++++|||||.++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~rv~LiGDAAh~~~P 328 (398)
T 2xdo_A 252 PDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATRIFPLE---KPWKSKRPLPITMIGDAAHLMPP 328 (398)
T ss_dssp CTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEEECCCC---SCCCSCCSSCEEECTHHHHCCCC
T ss_pred CcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeEeccCC---CCcccCCCccEEEEeehhccCCC
Confidence 000 011245556666665554432221111 11112222221 122 25 89999999999999
Q ss_pred CCcHHHHHHHHhcHHHHHHHHHhcCCCC-CCchhhhHHHHHH
Q 014377 290 STGYMVARTLAAAPIVANAIVRSLSSDR-SISGHKLSAEVWK 330 (426)
Q Consensus 290 ~~G~G~~~a~~~a~~la~~i~~~l~~~~-~~~~~~~y~~~~~ 330 (426)
++|||+|.|++||..||++|.+. ..+ ....+..|++.++
T Consensus 329 ~~GqG~n~ai~Da~~La~~L~~~--~~~~~~~~L~~Y~~~r~ 368 (398)
T 2xdo_A 329 FAGQGVNSGLVDALILSDNLADG--KFNSIEEAVKNYEQQMF 368 (398)
T ss_dssp TTSCSHHHHHHHHHHHHHHHHSC--CSSSHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHHHHhc--cCchHHHHHHHHHHHHH
Confidence 99999999999999999999864 122 2245677876644
No 19
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.97 E-value=5.1e-29 Score=239.81 Aligned_cols=305 Identities=17% Similarity=0.196 Sum_probs=176.7
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCc-EEEEcCCCCCCCCCcccc--h---hHHHhhcCchhhhhhc-c--CCeEEEe
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLS-VCSIDPSPKLIWPNNYGV--W---VDEFEAMDLLDCLDTT-W--SGAVVHI 77 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~-V~liE~~~~~~~~~~~g~--~---~~~l~~~~~~~~~~~~-~--~~~~~~~ 77 (426)
+..+||+||||||+|+++|+.|++.|++ |+|||+.+.+. +..++. + ...++.+|+.+.+... . ....+..
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~-~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~ 80 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR-PLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYID 80 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC-CCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc-cceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEc
Confidence 4568999999999999999999999999 99999987542 222222 2 2346777775544321 1 1111111
Q ss_pred cCCCc---------cccCCCccccCHHHHHHHHHHHHHh-CC-cEEE-EEEEEEEEEeCCeEEEEEcC---C--cEEEcC
Q 014377 78 DDNTK---------KDLDRPYGRVNRKLLKSKMLQKCIT-NG-VKFH-QAKVIKVIHEESKSLLICND---G--VTIQAA 140 (426)
Q Consensus 78 ~~~~~---------~~~~~~~~~v~r~~l~~~L~~~~~~-~g-v~~~-~~~v~~i~~~~~~~~v~~~~---g--~~i~a~ 140 (426)
..+.. .....+...++|..|.+.|.+.+.+ .| ++++ +++|++++. +++++|++.+ | .+++||
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad 159 (410)
T 3c96_A 81 QSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGAD 159 (410)
T ss_dssp TTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEES
T ss_pred CCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecC
Confidence 11110 0111233468999999999999976 35 5777 999999988 6678787765 6 589999
Q ss_pred EEEECCCCCCccccccCCCCC--ceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCC-
Q 014377 141 VVLDATGFSRCLVQYDKPYNP--GYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSS- 217 (426)
Q Consensus 141 ~vV~AdG~~s~~r~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~- 217 (426)
+||+|||.+|.+|+.+.+... .+.....+.......+.......++ +.. ...++++.+|..+
T Consensus 160 ~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~--------------~~~~~~~~~p~~~~ 224 (410)
T 3c96_A 160 VLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKTMIV-AND--------------EHWSRLVAYPISAR 224 (410)
T ss_dssp EEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCTTSSEEEE-EEC--------------TTCCEEEEEECCHH
T ss_pred EEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccccCCCeEEE-ecC--------------CCCcEEEEEecCCc
Confidence 999999999999998754321 1111111111122122222221111 100 0125567777752
Q ss_pred ----Ce--E-EEecccCc------CCCCCChHHHHHHHHHHHhhcCC---ccccccc--cceEeecCC--CCCCCC-CCc
Q 014377 218 ----NR--I-FLEETSLV------ARPGVPMKDIQERMVARLKHLGI---KVRSIEE--DEHCVIPMG--GPLPVL-PQR 276 (426)
Q Consensus 218 ----~~--~-~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~p~~--~~~~~~-~~~ 276 (426)
+. + |+...... ...........+.+.+.+..+.. ...+++. .....+|+. .+.+.| .+|
T Consensus 225 ~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gr 304 (410)
T 3c96_A 225 HAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQLILQYPMVDRDPLPHWGRGR 304 (410)
T ss_dssp HHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSEEEEEEEEECCCCSCCCBTT
T ss_pred ccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcccceeecccCCCccccccCC
Confidence 22 2 21111000 01111111112233333433221 1111111 112333432 223344 589
Q ss_pred eeEeeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCCCCCCchhhhHHHHHHh
Q 014377 277 VVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHKLSAEVWKD 331 (426)
Q Consensus 277 v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~~ 331 (426)
|+++|||||.++|++|||+|.|++||..||++|.+. ++....+..|++.++.
T Consensus 305 v~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~~~L~~Ye~~r~~ 356 (410)
T 3c96_A 305 ITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---ADVAAALREYEEARRP 356 (410)
T ss_dssp EEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHH
T ss_pred EEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999863 2222567788877653
No 20
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.97 E-value=3.2e-29 Score=240.24 Aligned_cols=315 Identities=14% Similarity=0.091 Sum_probs=172.6
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccc--h---hHHHhhcCchhhhhhccCCe--EEEec-
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGV--W---VDEFEAMDLLDCLDTTWSGA--VVHID- 78 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~--~---~~~l~~~~~~~~~~~~~~~~--~~~~~- 78 (426)
+..+||+||||||+|+++|+.|++.|++|+|+|+.+........|. + ...++.+++.+ .....+.. .+...
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDAL 81 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecC
Confidence 4568999999999999999999999999999999876422222332 2 23467777755 22222221 22222
Q ss_pred CCCc-cccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcccccc
Q 014377 79 DNTK-KDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYD 156 (426)
Q Consensus 79 ~~~~-~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r~~~ 156 (426)
.+.. .....+...+++..+.+.|.+.+ .|++++ +++|++++.++++++|++.+|++++||+||+|||.+|.+|+.+
T Consensus 82 ~g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~ 159 (397)
T 2vou_A 82 TGERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVVRKRL 159 (397)
T ss_dssp TCCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred CCCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhHHHHh
Confidence 1111 11122333478889999998876 588898 9999999998888999999999999999999999999999877
Q ss_pred CCCCC-ceeeEEEEEEEeecCCCCCC-------ceeeeecCCCcCCCchhhhccCCC--CCcEEEEeeCCCCeEEEec-c
Q 014377 157 KPYNP-GYQVAYGILAEVEEHPFDLD-------KMVFMDWRDSHLNNNSELKEANSK--IPTFLYAMPFSSNRIFLEE-T 225 (426)
Q Consensus 157 ~~~~~-~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~P~~~~~~~v~~-~ 225 (426)
. ... .+.....+...+.....+.. ...+......+...++.....+.. ...|+|..|.....-.... +
T Consensus 160 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 2vou_A 160 L-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMT 238 (397)
T ss_dssp H-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTB
T ss_pred c-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhcc
Confidence 6 322 12111222222222111111 000000000000000000000000 0123333333221000000 0
Q ss_pred cC-c--C----C-CCCChHHHHHHHHHHHh-hcCCccccccc--cceEeecCCC-CCCC-CCCceeEeeccCCCCCCCCc
Q 014377 226 SL-V--A----R-PGVPMKDIQERMVARLK-HLGIKVRSIEE--DEHCVIPMGG-PLPV-LPQRVVGIGGTAGMVHPSTG 292 (426)
Q Consensus 226 ~~-~--~----~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~p~~~-~~~~-~~~~v~liGdAa~~~~P~~G 292 (426)
.. . . . ...+.+.+ +.+.+.+. .+.. +.++++ .....+|+.. ..+. ..+|++|+|||||.++|++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~G 316 (397)
T 2vou_A 239 DVRGIRLPTSVHNNSLNPHNL-RQFHSKGESLFKP-FRDLVLNASSPFVTVVADATVDRMVHGRVLLIGDAAVTPRPHAA 316 (397)
T ss_dssp CTTSCBCSSEECGGGCCHHHH-HHHHHHHTTSCHH-HHHHHHHCSSCEEEEEEEBCCSCSEETTEEECGGGTSBCCGGGS
T ss_pred CCCCcccccccCcccCCHHHH-HHHHHHHHhhChH-HHHHHhccCCcceeeeeeecCCceecCcEEEEeccccccCCcch
Confidence 00 0 0 0 00122222 22222221 1111 122111 1112334321 2223 35899999999999999999
Q ss_pred HHHHHHHHhcHHHHHHHHHhcCCCCCCchhhhHHHHHH
Q 014377 293 YMVARTLAAAPIVANAIVRSLSSDRSISGHKLSAEVWK 330 (426)
Q Consensus 293 ~G~~~a~~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~ 330 (426)
||+|+|++||..||+.|.. ..+....+..|++.++
T Consensus 317 qG~n~ai~DA~~La~~L~~---~~~~~~~L~~Ye~~R~ 351 (397)
T 2vou_A 317 AGGAKASDDARTLAEVFTK---NHDLRGSLQSWETRQL 351 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHH---CSCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHH
Confidence 9999999999999999975 1122245777886644
No 21
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.96 E-value=7.1e-30 Score=243.28 Aligned_cols=299 Identities=15% Similarity=0.121 Sum_probs=178.2
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccc--hh---HHHhhcCchhhhhhc---cCCeEEEec
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGV--WV---DEFEAMDLLDCLDTT---WSGAVVHID 78 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~--~~---~~l~~~~~~~~~~~~---~~~~~~~~~ 78 (426)
+..+||+||||||+|+++|+.|++.|++|+|||+.+.+.. ..++. +. ..++.+++.+.+... .....+...
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~-~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 87 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA-FGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH 87 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC-CSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC-CCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC
Confidence 3468999999999999999999999999999999876532 22222 21 235667765443221 122222222
Q ss_pred CCCcc-cc---CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCccc
Q 014377 79 DNTKK-DL---DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLV 153 (426)
Q Consensus 79 ~~~~~-~~---~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r 153 (426)
+... .. ..+...++|..|.+.|.+.+.+.|++++ +++|++++. + + .|++.+|++++||+||+|||.+|.+|
T Consensus 88 -g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~~g~~~~ad~vV~AdG~~s~vr 163 (379)
T 3alj_A 88 -NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQTGEVLEADLIVGADGVGSKVR 163 (379)
T ss_dssp -TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEETTSCEEECSEEEECCCTTCHHH
T ss_pred -CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEECCCCEEEcCEEEECCCccHHHH
Confidence 1100 00 2334568999999999999999999999 999999987 3 3 78888998999999999999999999
Q ss_pred cccCCCCCc-eeeEEEEEEEeecC----CCC-CCceeee-ecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEeccc
Q 014377 154 QYDKPYNPG-YQVAYGILAEVEEH----PFD-LDKMVFM-DWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETS 226 (426)
Q Consensus 154 ~~~~~~~~~-~~~~~g~~~~~~~~----~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~ 226 (426)
+.+...... +.....+...++.. +.. .+...-+ .+.. ..+++|++|.+++.+.+..+.
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~p~~~~~~~~~~~~ 228 (379)
T 3alj_A 164 DSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWP---------------RVQRILYSPCNENELYLGLMA 228 (379)
T ss_dssp HHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSS---------------SCCEEEEEECSSSEEEEEEEE
T ss_pred HHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEEC---------------CCCEEEEEECCCCcEEEEEEe
Confidence 877652211 11111222222221 111 1111100 0000 137889999998875433221
Q ss_pred CcCCCCCChHHHHHHHHHHHhhcC---CccccccccceEeecCCC--CCCCC-CCceeEeeccCCCCCCCCcHHHHHHHH
Q 014377 227 LVARPGVPMKDIQERMVARLKHLG---IKVRSIEEDEHCVIPMGG--PLPVL-PQRVVGIGGTAGMVHPSTGYMVARTLA 300 (426)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~--~~~~~-~~~v~liGdAa~~~~P~~G~G~~~a~~ 300 (426)
....+. .+++.+.+..+..... ..+..........+|+.. ..+.| .+|++++|||||.++|++|||+|.|++
T Consensus 229 ~~~~~~--~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~ 306 (379)
T 3alj_A 229 PAADPR--GSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMV 306 (379)
T ss_dssp CTTCTT--TTCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHH
T ss_pred cCCCCC--HHHHHHHHhcCCchhccHHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHH
Confidence 111111 1223333333222111 000000000111112111 12233 489999999999999999999999999
Q ss_pred hcHHHHHHHHHhcCCCCCCchhhhHHHHHH
Q 014377 301 AAPIVANAIVRSLSSDRSISGHKLSAEVWK 330 (426)
Q Consensus 301 ~a~~la~~i~~~l~~~~~~~~~~~y~~~~~ 330 (426)
||..||+.|.+. .+....+..|++.++
T Consensus 307 da~~La~~L~~~---~~~~~~l~~Y~~~r~ 333 (379)
T 3alj_A 307 NAFSLSQDLEEG---SSVEDALVAWETRIR 333 (379)
T ss_dssp HHHHHHHHTTSS---SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccc---cCHHHHHHHHHHHHH
Confidence 999999998742 122245677876654
No 22
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.95 E-value=6.9e-27 Score=233.58 Aligned_cols=310 Identities=16% Similarity=0.186 Sum_probs=176.2
Q ss_pred CcCcEEEECchHHHHHHHHHHHHC------CCcEEEEcCCCCCCCCCcccc--hhHHHhhcCchhhhhh------ccCCe
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEA------GLSVCSIDPSPKLIWPNNYGV--WVDEFEAMDLLDCLDT------TWSGA 73 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~------G~~V~liE~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~------~~~~~ 73 (426)
+++||+||||||||+++|+.|++. |++|+|||+.+.++.....|. ....++.+ +.+.... .....
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l-l~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL-FPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH-CTTHHHHTCCCCEECCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH-HHHHHhcCCceeeeechh
Confidence 468999999999999999999999 999999999876543222222 22222222 1111000 00000
Q ss_pred EEEe-cCCCc-------c-ccC-CCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCC-eEE-EEEc------CC
Q 014377 74 VVHI-DDNTK-------K-DLD-RPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEES-KSL-LICN------DG 134 (426)
Q Consensus 74 ~~~~-~~~~~-------~-~~~-~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~-v~~~------~g 134 (426)
.+.+ ..... . ... .....++|..|.+.|.+++.+.|++++ +++|+++..+++ .+. |.+. +|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 113 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 1111 11000 0 011 112357999999999999999999999 999999988764 343 6665 33
Q ss_pred ---------cEEEcCEEEECCCCCCcccccc----CCCCC--ceeeEEEEE--EEeecCCCCCCce-eeeecCCCcCCCc
Q 014377 135 ---------VTIQAAVVLDATGFSRCLVQYD----KPYNP--GYQVAYGIL--AEVEEHPFDLDKM-VFMDWRDSHLNNN 196 (426)
Q Consensus 135 ---------~~i~a~~vV~AdG~~s~~r~~~----~~~~~--~~~~~~g~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~ 196 (426)
.+++||+||+|||.+|.+++.+ +.... ......++. +.++......... .++.+....
T Consensus 193 ~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~---- 268 (584)
T 2gmh_A 193 APKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDR---- 268 (584)
T ss_dssp CEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCT----
T ss_pred CcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccccC----
Confidence 6899999999999999988764 22211 111222322 2222211112211 111111110
Q ss_pred hhhhccCCCCCcEEEEeeCC--CCeEEEecccCcC--CCCCChHHHHHHHHHHHhh--cC--CccccccccceEeecCCC
Q 014377 197 SELKEANSKIPTFLYAMPFS--SNRIFLEETSLVA--RPGVPMKDIQERMVARLKH--LG--IKVRSIEEDEHCVIPMGG 268 (426)
Q Consensus 197 ~~~~~~~~~~~~~~~~~P~~--~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~p~~~ 268 (426)
...+..|++|.. ++.+.++...... .+..+.. +.+.++... .. +...+........++..+
T Consensus 269 --------~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~---~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~ 337 (584)
T 2gmh_A 269 --------HTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPF---REFQRWKHHPSIKPTLEGGKRIAYGARALNEGG 337 (584)
T ss_dssp --------TSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHH---HHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCG
T ss_pred --------CcCCceEEEEecCCCCeEEEEEEEecCcccccCChH---HHHHHHHhChHHHHHhCCCeEEEecceEccCCC
Confidence 001224455665 6766554432211 1122222 222222211 00 001112222222222221
Q ss_pred --CCCC-CCCceeEeeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCCCC--CCch---hhhHHHHHHhcC
Q 014377 269 --PLPV-LPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDR--SISG---HKLSAEVWKDLW 333 (426)
Q Consensus 269 --~~~~-~~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~--~~~~---~~~y~~~~~~~~ 333 (426)
..+. ..+|++++|||||.++|++|+|++.||+||..||+.|.+.++.++ ...+ +..|++.+++.|
T Consensus 338 ~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~ 410 (584)
T 2gmh_A 338 FQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSW 410 (584)
T ss_dssp GGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSH
T ss_pred cccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhH
Confidence 1233 358999999999999999999999999999999999999886442 2233 788998887654
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.95 E-value=3.1e-27 Score=234.24 Aligned_cols=313 Identities=14% Similarity=0.167 Sum_probs=185.4
Q ss_pred CCcCcEEEECchHHHHHHHHHHHH------------CCCcEEEEcCCCCCCCCCcccchh---HHHhhcCchhh--hhh-
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSE------------AGLSVCSIDPSPKLIWPNNYGVWV---DEFEAMDLLDC--LDT- 68 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~------------~G~~V~liE~~~~~~~~~~~g~~~---~~l~~~~~~~~--~~~- 68 (426)
+..+||+||||||||+++|+.|++ .|++|+|||+.+.+......+.+. ..++.+|+.+. +..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~g~~~~p~~~~~l~~lGi~e~~~~~~~ 84 (526)
T 2pyx_A 5 KPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSMRSTLSKIGIDENDFIRQC 84 (526)
T ss_dssp SCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCSCEECCTHHHHHHHHHTCCHHHHHHHT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcceeeechHhHHHHHHHcCCCHHHHHHHc
Confidence 356899999999999999999999 999999999976543222222222 34667777653 321
Q ss_pred -----------ccCC-------eEEEecCCC--------c-c----------------------------------c--c
Q 014377 69 -----------TWSG-------AVVHIDDNT--------K-K----------------------------------D--L 85 (426)
Q Consensus 69 -----------~~~~-------~~~~~~~~~--------~-~----------------------------------~--~ 85 (426)
.|.. ......... . . . .
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~ 164 (526)
T 2pyx_A 85 DASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHF 164 (526)
T ss_dssp TCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCC
T ss_pred CCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCC
Confidence 1211 111100000 0 0 0 0
Q ss_pred CCCc-cccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCe--EEEEEcCCcEEEcCEEEECCCCCCcc-ccccCCC
Q 014377 86 DRPY-GRVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESK--SLLICNDGVTIQAAVVLDATGFSRCL-VQYDKPY 159 (426)
Q Consensus 86 ~~~~-~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~--~~v~~~~g~~i~a~~vV~AdG~~s~~-r~~~~~~ 159 (426)
..++ ..++|..|.+.|.+.+.+ .|++++ + +|++++.++++ +.|++.+|++++||+||+|||.+|.+ ++.++..
T Consensus 165 ~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~ 243 (526)
T 2pyx_A 165 QNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVP 243 (526)
T ss_dssp SSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCC
T ss_pred CCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 0111 248999999999999998 899998 6 79999876543 46778887789999999999999998 4545432
Q ss_pred CCce------eeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCcCCCCC
Q 014377 160 NPGY------QVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGV 233 (426)
Q Consensus 160 ~~~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~~~~~~ 233 (426)
...+ ........................ . ...+|+|.+|..++.. ++... .....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~----~~~g~~~~~pl~~~~~-~~~v~--~~~~~ 304 (526)
T 2pyx_A 244 FLSQKSVLFNDRALAIQVPYSDANSPIASCTHST------------A----QPNGWIWDIGLPTRKG-VGYVY--SSSHT 304 (526)
T ss_dssp EEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEE------------E----ETTEEEEEEECSSEEE-EEEEE--CTTTC
T ss_pred cccccccccCccEEEEEeeccCCCCCCCCceeEE------------e----cCCCeEEEeeCCCceE-EEEEe--cCCCC
Confidence 2110 112222222111000001000000 0 0147899999987532 22111 11112
Q ss_pred ChHHHHHHHHHHHhhcCCccccccccceEeecCCC--CCCCCCCceeEeeccCCCCCCCCcHHHHHHHHhcHHHHHHHHH
Q 014377 234 PMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGG--PLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVR 311 (426)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~ 311 (426)
+.++..+.+.+++...+..+. ..+...+++.. ....+.+|++++|||||.++|++|+|++.|++||..||++|..
T Consensus 305 ~~~~~~~~l~~~l~~~~~~l~---~~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~ 381 (526)
T 2pyx_A 305 NDIDAQKTLFNYLGVDGAAAD---KLEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPP 381 (526)
T ss_dssp CHHHHHHHHHHHHTCCHHHHH---HCCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCS
T ss_pred ChHHHHHHHHHHHHhcCcccc---cCCceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhh
Confidence 445566667666643321111 01122334321 1223569999999999999999999999999999988887752
Q ss_pred hcCCCCCCchhhhHHHHHHhcCCHHHHHHHHHH
Q 014377 312 SLSSDRSISGHKLSAEVWKDLWPIERRRQREFF 344 (426)
Q Consensus 312 ~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 344 (426)
.. ......+..|++.++..|...+.+....+
T Consensus 382 ~~--~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y 412 (526)
T 2pyx_A 382 NR--MVMDTISARVNERYQQHWQQIIDFLKLHY 412 (526)
T ss_dssp CH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cC--CcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11124567788877766654444443444
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.95 E-value=2.5e-26 Score=227.29 Aligned_cols=224 Identities=13% Similarity=0.048 Sum_probs=139.0
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe--EEEEEcCCcEEEcCEEEECCCCCCccccc-cCCCCC-----
Q 014377 91 RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK--SLLICNDGVTIQAAVVLDATGFSRCLVQY-DKPYNP----- 161 (426)
Q Consensus 91 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~--~~v~~~~g~~i~a~~vV~AdG~~s~~r~~-~~~~~~----- 161 (426)
.++|..|.+.|.+.+.+.|++++ + +|++++.++++ +.|++.+|++++||+||+|||.+|.+++. ++....
T Consensus 169 ~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~ 247 (511)
T 2weu_A 169 HFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSFSDV 247 (511)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTT
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCcccccc
Confidence 48999999999999999999998 7 99999886544 67888888899999999999999998543 332210
Q ss_pred -ceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCcCCCCCChHHHHH
Q 014377 162 -GYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQE 240 (426)
Q Consensus 162 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~~~~~~~~~~~~~ 240 (426)
.........+....+. ......... . ...+|+|.+|..+ +..++.... ....+.++..+
T Consensus 248 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~---~~~g~~~~~P~~~-~~~~g~~~~--~~~~~~~~~~~ 307 (511)
T 2weu_A 248 LPNNRAVALRVPRENDE-DMRPYTTAT-------------A---MSAGWMWTIPLFK-RDGNGYVYS--DEFISPEEAER 307 (511)
T ss_dssp CCCCEEEEEEEECSSGG-GCCSSEEEE-------------E---ETTEEEEEEECSS-EEEEEEEEC--TTTSCHHHHHH
T ss_pred CcccceEEEEeccCCCC-CCCcceece-------------e---cCCCcEEEEECCC-ceEEEEEEC--CCCCCHHHHHH
Confidence 0111222222211100 000000000 0 0137899999987 344433221 12235566666
Q ss_pred HHHHHHhhcCCccccccccceEeecCC-CCCC-CCCCceeEeeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCCCCC
Q 014377 241 RMVARLKHLGIKVRSIEEDEHCVIPMG-GPLP-VLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRS 318 (426)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~-~~~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~~ 318 (426)
.+.+.+... ... .+...+++. +..+ .+.+|++++|||||.++|++|+|++.|++||..||+.|.+ ....
T Consensus 308 ~l~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~---~~~~ 378 (511)
T 2weu_A 308 ELRSTVAPG-RDD-----LEANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG---ERWD 378 (511)
T ss_dssp HHHHHHCTT-CTT-----SCCEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC---TTCC
T ss_pred HHHHHhCcc-ccc-----ccceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc---CCCC
Confidence 776666321 111 122233432 1222 2468999999999999999999999999999999887763 2222
Q ss_pred CchhhhHHHHHHhcCCHHHHHHHHHH
Q 014377 319 ISGHKLSAEVWKDLWPIERRRQREFF 344 (426)
Q Consensus 319 ~~~~~~y~~~~~~~~~~~~~~~~~~~ 344 (426)
...+..|++.++..+...+.....++
T Consensus 379 ~~~l~~Y~~~~~~~~~~~~~~~~~~y 404 (511)
T 2weu_A 379 PVLISAYNERMAHMVDGVKEFLVLHY 404 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 24567898776655544333333333
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.94 E-value=6.4e-26 Score=225.47 Aligned_cols=300 Identities=11% Similarity=0.067 Sum_probs=179.8
Q ss_pred CCcCcEEEECchHHHHHHHHHHHH---CCCcEEEEcCCCCCCCCCcccch---hH-HHhhcCchhh--hhh---------
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSE---AGLSVCSIDPSPKLIWPNNYGVW---VD-EFEAMDLLDC--LDT--------- 68 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~~~g~~---~~-~l~~~~~~~~--~~~--------- 68 (426)
+..+||+|||||++|+++|+.|++ .|++|+|||+.+.+......+.+ .. .++.+|+.+. +..
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~ 82 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAI 82 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCc
Confidence 356899999999999999999999 99999999997643222111222 12 3344455321 221
Q ss_pred ---ccC-------CeEEEecCCC---------------------ccc------------------------cCCCc-ccc
Q 014377 69 ---TWS-------GAVVHIDDNT---------------------KKD------------------------LDRPY-GRV 92 (426)
Q Consensus 69 ---~~~-------~~~~~~~~~~---------------------~~~------------------------~~~~~-~~v 92 (426)
.|. ........+. ... ...++ ..+
T Consensus 83 ~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i 162 (538)
T 2aqj_A 83 KFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHF 162 (538)
T ss_dssp EEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEE
T ss_pred cccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEE
Confidence 111 0011111100 000 00122 358
Q ss_pred CHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe--EEEEEcCCcEEEcCEEEECCCCCCccccc-cCCCCCce----e
Q 014377 93 NRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK--SLLICNDGVTIQAAVVLDATGFSRCLVQY-DKPYNPGY----Q 164 (426)
Q Consensus 93 ~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~--~~v~~~~g~~i~a~~vV~AdG~~s~~r~~-~~~~~~~~----~ 164 (426)
++..|.+.|.+.+.+.|++++ + +|++++.++++ +.|++.+|++++||+||+|||.+|.+++. ++.....+ .
T Consensus 163 ~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~ 241 (538)
T 2aqj_A 163 DAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYLL 241 (538)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTCC
T ss_pred eHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccccccccc
Confidence 999999999999999999999 6 89999886543 56888888889999999999999998643 33221100 0
Q ss_pred eEEEEEEEeecCC----CCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCcCCCCCChHHHHH
Q 014377 165 VAYGILAEVEEHP----FDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQE 240 (426)
Q Consensus 165 ~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~~~~~~~~~~~~~ 240 (426)
...++.+...... ..... ... ....+|+|.+|..++. .++.... ....+.++..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~-----------------~~~~g~~~~~p~~~~~-~~g~v~~--~~~~~~~~~~~ 300 (538)
T 2aqj_A 242 CDSAVASAVPNDDARDGVEPYT-SSI-----------------AMNSGWTWKIPMLGRF-GSGYVFS--SHFTSRDQATA 300 (538)
T ss_dssp CCEEEEEEEECCHHHHCCCSSE-EEE-----------------ECSSEEEEEEEETTEE-EEEEEEC--TTTSCHHHHHH
T ss_pred cceEEEEecccCCcccCCCCce-eee-----------------ecCCceEEEecCCCce-EEEEEEc--CCCCChHHHHH
Confidence 0112222222100 00000 000 0114799999998753 2322211 11234566777
Q ss_pred HHHHHHhhcCCccccccccceEeecCCC--CCCCCCCceeEeeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCCCCC
Q 014377 241 RMVARLKHLGIKVRSIEEDEHCVIPMGG--PLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRS 318 (426)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~~ 318 (426)
.+.+++.... .. +...+++.. ..+.+.+|++++|||||.++|++|+|++.|++||..|++.|.. ....
T Consensus 301 ~l~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~---~~~~ 370 (538)
T 2aqj_A 301 DFLKLWGLSD--NQ-----PLNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD---TSFD 370 (538)
T ss_dssp HHHHHHTCCT--TC-----CCEEEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB---TTCC
T ss_pred HHHHHhcCCC--CC-----CceEEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc---cCCC
Confidence 7777765421 11 122334321 1223579999999999999999999999999999988876652 1222
Q ss_pred CchhhhHHHHHHhcCCHHHH
Q 014377 319 ISGHKLSAEVWKDLWPIERR 338 (426)
Q Consensus 319 ~~~~~~y~~~~~~~~~~~~~ 338 (426)
...+..|++.++..|...+.
T Consensus 371 ~~~l~~Y~~~~~~~~~~~~~ 390 (538)
T 2aqj_A 371 PRLSDAFNAEIVHMFDDCRD 390 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 24577898877655544333
No 26
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.94 E-value=4.7e-26 Score=226.68 Aligned_cols=306 Identities=11% Similarity=0.069 Sum_probs=181.7
Q ss_pred CcCcEEEECchHHHHHHHHHHHH---CCCcEEEEcCCCCCCCCCcccch---hH-HHhhcCchhh--hhh----------
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSE---AGLSVCSIDPSPKLIWPNNYGVW---VD-EFEAMDLLDC--LDT---------- 68 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~~~g~~---~~-~l~~~~~~~~--~~~---------- 68 (426)
..+||+|||||++|+++|+.|++ .|++|+|||+.+.+......+.+ .. .++.+++.+. +..
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~~ 103 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAIK 103 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEeee
Confidence 57899999999999999999999 99999999997644322111222 22 3455565432 221
Q ss_pred --ccCCe---------------EEEecCC-----------------------C-c---c-----cc--------------
Q 014377 69 --TWSGA---------------VVHIDDN-----------------------T-K---K-----DL-------------- 85 (426)
Q Consensus 69 --~~~~~---------------~~~~~~~-----------------------~-~---~-----~~-------------- 85 (426)
.|... ....... . . . .+
T Consensus 104 ~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (550)
T 2e4g_A 104 FINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGSK 183 (550)
T ss_dssp EESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSCB
T ss_pred EeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCCC
Confidence 12110 0111000 0 0 0 00
Q ss_pred CCCc-cccCHHHHHHHHHHHHHhC-CcEEE-EEEEEEEEEeCCe--EEEEEcCCcEEEcCEEEECCCCCCccc-cccCCC
Q 014377 86 DRPY-GRVNRKLLKSKMLQKCITN-GVKFH-QAKVIKVIHEESK--SLLICNDGVTIQAAVVLDATGFSRCLV-QYDKPY 159 (426)
Q Consensus 86 ~~~~-~~v~r~~l~~~L~~~~~~~-gv~~~-~~~v~~i~~~~~~--~~v~~~~g~~i~a~~vV~AdG~~s~~r-~~~~~~ 159 (426)
..++ ..+++..|.+.|.+.+.+. |++++ + +|++++.++++ +.|++.+|++++||+||+|||.+|.++ +.++..
T Consensus 184 ~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~ 262 (550)
T 2e4g_A 184 VTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEP 262 (550)
T ss_dssp CSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred CCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCC
Confidence 1222 2489999999999999987 99999 7 99999876544 678888898999999999999999984 433332
Q ss_pred CC------ceeeEEEEEEEeecC--CCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCcCCC
Q 014377 160 NP------GYQVAYGILAEVEEH--PFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARP 231 (426)
Q Consensus 160 ~~------~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~~~~ 231 (426)
.. ..+......+....+ ...+. .... ....+|+|.+|..+. ..++.... ..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----------------~~~~g~~~~ipl~~~-~~~g~v~~--~~ 321 (550)
T 2e4g_A 263 FLDMSDHLLNDSAVATQVPHDDDANGVEPF-TSAI-----------------AMKSGWTWKIPMLGR-FGTGYVYS--SR 321 (550)
T ss_dssp EEECTTTCCCCEEEEEEEECCHHHHCCCSS-EEEE-----------------ECSSEEEEEEECSSE-EEEEEEEC--TT
T ss_pred cccccccccccceEEEeecccCCcccCCCc-eeee-----------------ecCCceEEEccCCCc-cceEEEEe--cC
Confidence 10 001111211111100 00000 0000 001488999998773 33322211 11
Q ss_pred CCChHHHHHHHHHHHhhcCCccccccccceEeecCCC-CCC-CCCCceeEeeccCCCCCCCCcHHHHHHHHhcHHHHHHH
Q 014377 232 GVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGG-PLP-VLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAI 309 (426)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~-~~~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~i 309 (426)
..+.++..+.+.+++... ..+. ....+++.. ..+ .+.+|++++|||||.++|++|+|++.|+.+|..|+++|
T Consensus 322 ~~~~~~~~~~l~~~~~~~-p~l~-----~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L 395 (550)
T 2e4g_A 322 FATEDEAVREFCEMWHLD-PETQ-----PLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHF 395 (550)
T ss_dssp TSCHHHHHHHHHHHTTCC-TTTS-----CCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTC
T ss_pred CCChHHHHHHHHHhhCcC-cccC-----CCceEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhc
Confidence 235566666776665432 1111 112233321 122 35689999999999999999999999999999998876
Q ss_pred HHhcCCCCCCchhhhHHHHHHhcCCHHHHHHHHHH
Q 014377 310 VRSLSSDRSISGHKLSAEVWKDLWPIERRRQREFF 344 (426)
Q Consensus 310 ~~~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 344 (426)
.+ .......+..|++.++..+...+.....++
T Consensus 396 ~~---~~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y 427 (550)
T 2e4g_A 396 PD---KSLNPVLTARFNREIETMFDDTRDFIQAHF 427 (550)
T ss_dssp CC---TTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 52 222224577898777655544444333333
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.94 E-value=4.8e-26 Score=216.86 Aligned_cols=284 Identities=14% Similarity=0.031 Sum_probs=163.1
Q ss_pred CcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccc--hhHHHh---hcCch-hh-hh---hccCCeEEEe
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGV--WVDEFE---AMDLL-DC-LD---TTWSGAVVHI 77 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~--~~~~l~---~~~~~-~~-~~---~~~~~~~~~~ 77 (426)
.||+||||||+|+++|+.|++. |++|+|+|+.+.+. ...++. +...+. ..++. +. +. ..+....+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE-VLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC-CCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC-cceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe
Confidence 3899999999999999999999 99999999987642 111111 111111 11111 11 11 1122222222
Q ss_pred cCCCcc--ccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcccc
Q 014377 78 DDNTKK--DLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQ 154 (426)
Q Consensus 78 ~~~~~~--~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r~ 154 (426)
.+... ....++..++|..|.+.|.+.+.+.|++++ +++|++++.. .+++||+||+|||.+|. |+
T Consensus 80 -~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~-R~ 146 (381)
T 3c4a_A 80 -HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK-TA 146 (381)
T ss_dssp -SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-TC
T ss_pred -CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-HH
Confidence 11110 012334468999999999999998999999 8888877531 12579999999999999 88
Q ss_pred ccC----CCCCceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEE--EEeeCCCCeEEE--eccc
Q 014377 155 YDK----PYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFL--YAMPFSSNRIFL--EETS 226 (426)
Q Consensus 155 ~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~~~v--~~~~ 226 (426)
.+. +....+.....+. ... .. ......++.+. ..+++ +.+|.+++...+ ....
T Consensus 147 ~l~~~~g~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~----------------~~g~~~~~~~p~~~~~~~~~~~~~~ 207 (381)
T 3c4a_A 147 HFTEALVPQVDYGRNKYIWY-GTS-QL-FDQMNLVFRTH----------------GKDIFIAHAYKYSDTMSTFIVECSE 207 (381)
T ss_dssp CSSGGGCCCCEEEEEEEEEE-EES-SC-CSSEEEEEEEE----------------TTEEEEEEEEECSSSCEEEEEEECH
T ss_pred hhhhhcCCCcccCCccEEEE-ecC-CC-CCcceeeEeeC----------------CCcEEEEEEEEecCCeEEEEEECCc
Confidence 762 2221111111221 111 11 11111111100 02433 368887765322 2110
Q ss_pred C----cCCCCCChHHHHHHHHHHHhhcCCccccccccceEeecCC--CCCCCC-CCceeEeeccCCCCCCCCcHHHHHHH
Q 014377 227 L----VARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMG--GPLPVL-PQRVVGIGGTAGMVHPSTGYMVARTL 299 (426)
Q Consensus 227 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~-~~~v~liGdAa~~~~P~~G~G~~~a~ 299 (426)
. ...+..+.++..+.+.+++....... +++......+++. ...+.| .+|++++|||||.++|++|||+|+|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al 286 (381)
T 3c4a_A 208 ETYARARLGEMSEEASAEYVAKVFQAELGGH-GLVSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAV 286 (381)
T ss_dssp HHHHHTTSSSSCHHHHHHHHHHHTHHHHTTC-CCBCCTTTCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHH
T ss_pred cccccCCcccCChHHHHHHHHHHhcccCCCc-hhhcCCCcceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHH
Confidence 0 11133456667777776666542221 1211110011211 122333 48999999999999999999999999
Q ss_pred HhcHHHHHHHHHhcCCCCCCchhhhHHHHHH
Q 014377 300 AAAPIVANAIVRSLSSDRSISGHKLSAEVWK 330 (426)
Q Consensus 300 ~~a~~la~~i~~~l~~~~~~~~~~~y~~~~~ 330 (426)
+||..||++|.+. .+....+..|++.++
T Consensus 287 ~Da~~La~~L~~~---~~~~~aL~~Y~~~r~ 314 (381)
T 3c4a_A 287 VVAQLLVKALCTE---DGVPAALKRFEERAL 314 (381)
T ss_dssp HHHHHHHHHHHHS---SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc---ccHHHHHHHHHHHHH
Confidence 9999999999864 222245777886654
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.88 E-value=1.9e-21 Score=187.79 Aligned_cols=289 Identities=16% Similarity=0.126 Sum_probs=149.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC--Ccc---cchh---HHHhhcCchhh--hhhccCCeEEEe
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP--NNY---GVWV---DEFEAMDLLDC--LDTTWSGAVVHI 77 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~--~~~---g~~~---~~l~~~~~~~~--~~~~~~~~~~~~ 77 (426)
+++||+||||||+|+++|+.|+++|++|+|||+.+..... +.. ..+. ..+..+++... ......+..+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 100 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGYFGHYYYV 100 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCEEEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccccceeEEE
Confidence 4579999999999999999999999999999998632111 111 1111 12234443211 111122222322
Q ss_pred cCCCccc----cCCCccccCHHHHHHHHHHHHHhCCcEEEEEEE--EEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 78 DDNTKKD----LDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKV--IKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 78 ~~~~~~~----~~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v--~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
....... ...+...+++..+...|.+.+.+.|++++...+ .+++ .....+|+||+|||.+|.
T Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~~~~~ad~VV~AdG~~S~ 168 (430)
T 3ihm_A 101 GGPQPMRFYGDLKAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------GLSEQYDLLVVCTGKYAL 168 (430)
T ss_dssp CSSSCEEEEEEEEEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------HHHTTSSEEEECCCCTTG
T ss_pred CCCCccccchhcCCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------hhcccCCEEEECCCCcch
Confidence 2211111 111223589999999999999999988753111 1110 001258999999999998
Q ss_pred cccccCC-----CC-CceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeC--CCCeEE--
Q 014377 152 LVQYDKP-----YN-PGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPF--SSNRIF-- 221 (426)
Q Consensus 152 ~r~~~~~-----~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--~~~~~~-- 221 (426)
++..... .. +......+....+.. +. .....+..+. ..+.++.+|. .++...
T Consensus 169 ~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~-~~-~~~~~~~~~~----------------~~G~~~~~p~~~~~g~~~~~ 230 (430)
T 3ihm_A 169 GKVFEKQSENSPFEKPQRALCVGLFKGIKE-AP-IRAVTMSFSP----------------GHGELIEIPTLSFNGMSTAL 230 (430)
T ss_dssp GGGSCBCGGGCCCSSCSSEEEEEEEESBCC-CS-SCCEEEEEET----------------TTEEEEEEEEEETTEEEEEE
T ss_pred HHhccCCCCCCcccCCCeeEEEEEEccCCC-CC-cCeeeeeecC----------------CCcceEEecccCCCcceEEE
Confidence 7643211 11 111112222222211 11 1111111110 0245666664 223221
Q ss_pred -EecccCc---CCCC----CChHHHHHHHHHHHhhcCCcc----cccc--c----cc---eEeecCC-CCCCC-CCCcee
Q 014377 222 -LEETSLV---ARPG----VPMKDIQERMVARLKHLGIKV----RSIE--E----DE---HCVIPMG-GPLPV-LPQRVV 278 (426)
Q Consensus 222 -v~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~--~----~~---~~~~p~~-~~~~~-~~~~v~ 278 (426)
+...... .... .+.++..+.+.+.+..+.... .... . .. ...+|+. ...+. +.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (430)
T 3ihm_A 231 VLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTI 310 (430)
T ss_dssp EEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEE
T ss_pred EEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeecccccccccCCCCEE
Confidence 1111000 0011 255555555554444322111 1111 0 00 0122321 11222 357787
Q ss_pred E-eeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCCCCCCchhhhHHHHH
Q 014377 279 G-IGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHKLSAEVW 329 (426)
Q Consensus 279 l-iGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~~~~~~~~~~y~~~~ 329 (426)
+ +|||||.++|++|||+|.|++||..|+++|.+. ++....+..|+..+
T Consensus 311 ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~~~~~~~~~~~~~r 359 (430)
T 3ihm_A 311 IGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---SVYDLRFSEHLERR 359 (430)
T ss_dssp EECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---SCCSHHHHHHHHHH
T ss_pred EEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHH
Confidence 7 999999999999999999999999999999975 22335667786543
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.81 E-value=4.3e-19 Score=174.02 Aligned_cols=136 Identities=18% Similarity=0.219 Sum_probs=100.7
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchh---HHHhhcCchhhhhhccCCeEEEecCCCcc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWV---DEFEAMDLLDCLDTTWSGAVVHIDDNTKK 83 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
...+||+||||||+|+++|+.|++.|++|+|||+.+..+..+..+.+. ..+..+++.+... .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~---------------~ 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYG---------------R 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCT---------------T
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccc---------------c
Confidence 457899999999999999999999999999999987654333333332 2344555432211 0
Q ss_pred ccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEe---CCeEEEEE--c-CC--cEEEcCEEEECCCCCCcccc
Q 014377 84 DLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHE---ESKSLLIC--N-DG--VTIQAAVVLDATGFSRCLVQ 154 (426)
Q Consensus 84 ~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~---~~~~~v~~--~-~g--~~i~a~~vV~AdG~~s~~r~ 154 (426)
.....+..+++..+.+.|.+.+.+.|++++ +++|++++.+ ++.+.|++ . +| .+++||+||+|||.+|.+++
T Consensus 155 ~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 155 FCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp TTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTT
T ss_pred ccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccccc
Confidence 011123357889999999999998999999 9999999874 34566766 3 55 57999999999999999986
Q ss_pred ccC
Q 014377 155 YDK 157 (426)
Q Consensus 155 ~~~ 157 (426)
+.+
T Consensus 235 ~~~ 237 (497)
T 2bry_A 235 FTI 237 (497)
T ss_dssp CEE
T ss_pred ccc
Confidence 543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.79 E-value=9.4e-18 Score=156.72 Aligned_cols=278 Identities=14% Similarity=0.115 Sum_probs=148.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCc---c-------cc---------hhHHHhhcCchhhhhhc
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN---Y-------GV---------WVDEFEAMDLLDCLDTT 69 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~---~-------g~---------~~~~l~~~~~~~~~~~~ 69 (426)
++||+|||||++|+++|+.|++.|++|+|||+.+.++.... . +. +...++.+.... ....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQG-HVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHT-SEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCC-Ceee
Confidence 47999999999999999999999999999999875411000 0 00 001111110000 0112
Q ss_pred cCCeEEEecCCCccccC-CCcccc---CHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEE-cCEEE
Q 014377 70 WSGAVVHIDDNTKKDLD-RPYGRV---NRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQ-AAVVL 143 (426)
Q Consensus 70 ~~~~~~~~~~~~~~~~~-~~~~~v---~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~-a~~vV 143 (426)
|................ .....+ ....+.+.| . .|++++ +++|++++.+++++.|++.+|+.+. ||+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l----~-~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV 155 (336)
T 1yvv_A 81 WTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAM----R-GDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVI 155 (336)
T ss_dssp ECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHH----H-TTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEE
T ss_pred ccccceeccCcccccCCCCCccEEcCccHHHHHHHH----H-ccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEE
Confidence 22222222211100000 011111 122233333 2 388888 9999999998889999999997765 99999
Q ss_pred ECCCCCCccccccCC-------CCCceeeEEEEEEEeecCCCCCCc-eeeeecCCCcCCCchhhhccCCCCCcEEEEe--
Q 014377 144 DATGFSRCLVQYDKP-------YNPGYQVAYGILAEVEEHPFDLDK-MVFMDWRDSHLNNNSELKEANSKIPTFLYAM-- 213 (426)
Q Consensus 144 ~AdG~~s~~r~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 213 (426)
+|+|.+|..+..... ....+.....+.+..+.+ +.... ..+. ... ..+|++..
T Consensus 156 ~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~-------------~~~~l~~~~~ 218 (336)
T 1yvv_A 156 IATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETP-LQTPMQGCFV---QDS-------------PLDWLARNRS 218 (336)
T ss_dssp ECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSC-CSCCCCEEEE---CSS-------------SEEEEEEGGG
T ss_pred EcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCC-CCCCCCeEEe---CCC-------------ceeEEEecCc
Confidence 999999887754211 122334333333444322 22111 1111 000 01233321
Q ss_pred -eCCCCe----EEEecccC-cCCCCCChHHHHHHHHHHHhhc-CCccccc--cccce--EeecCCCCCCC----CCCcee
Q 014377 214 -PFSSNR----IFLEETSL-VARPGVPMKDIQERMVARLKHL-GIKVRSI--EEDEH--CVIPMGGPLPV----LPQRVV 278 (426)
Q Consensus 214 -P~~~~~----~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~--~~~p~~~~~~~----~~~~v~ 278 (426)
|..++. ++...... ......+++++.+.+.+.+... +....+. ..... ..+|.....+. ..+|++
T Consensus 219 ~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~ 298 (336)
T 1yvv_A 219 KPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHEWGALSDADLGIY 298 (336)
T ss_dssp STTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCCCSCEEETTTTEE
T ss_pred CCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCccCCCCCCCCCeeecCCCCEE
Confidence 332221 22211111 1123457778888887777653 3322111 11111 22343322121 238999
Q ss_pred EeeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCC
Q 014377 279 GIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSS 315 (426)
Q Consensus 279 liGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~ 315 (426)
++||+++. .|++.|+.+|..+|+.|.+.+..
T Consensus 299 laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 299 VCGDWCLS------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp ECCGGGTT------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCCCC------CCHHHHHHHHHHHHHHHHHHhhh
Confidence 99999863 49999999999999999988754
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.79 E-value=1.9e-18 Score=164.38 Aligned_cols=190 Identities=13% Similarity=0.104 Sum_probs=119.7
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc-cccccCCCCCceeeEE
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC-LVQYDKPYNPGYQVAY 167 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~-~r~~~~~~~~~~~~~~ 167 (426)
+.+++..+.+.|.+.+.+.|++++ +++|++++.+++++.|++.+| +++||.||.|+|.+|. +.+..+... ......
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~-~~~~~~ 236 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNN-AFLPVK 236 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCC-CCEEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCC-ceeccc
Confidence 457889999999999999999999 899999998877787878777 8999999999999886 544443222 223355
Q ss_pred EEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCcCC--CCCChH---HHHHHH
Q 014377 168 GILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVAR--PGVPMK---DIQERM 242 (426)
Q Consensus 168 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~~~--~~~~~~---~~~~~~ 242 (426)
|..+.++.........+ . ....|++|..++++.++.+..... ...+.+ .+.+.+
T Consensus 237 g~~~~~~~~~~~~~~~~-~--------------------~~~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~ 295 (382)
T 1ryi_A 237 GECLSVWNDDIPLTKTL-Y--------------------HDHCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKA 295 (382)
T ss_dssp EEEEEEECCSSCCCSEE-E--------------------ETTEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHH
T ss_pred eEEEEECCCCCCccceE-E--------------------cCCEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHH
Confidence 65555543211111111 0 023788998888888877643221 122222 233333
Q ss_pred HHHHhhcCCccccccccceEeecCCCCCCCCCCceeEeeccC-----CCCCCCCcHHHHHHHHhcHHHHHHHH
Q 014377 243 VARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTA-----GMVHPSTGYMVARTLAAAPIVANAIV 310 (426)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~liGdAa-----~~~~P~~G~G~~~a~~~a~~la~~i~ 310 (426)
.++++.+. ..++.....+..|+ ..++.+++|++. ....+++|.|+..|...|..+|+.|.
T Consensus 296 ~~~~p~l~--~~~~~~~w~g~~~~------t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 360 (382)
T 1ryi_A 296 KTMLPAIQ--NMKVDRFWAGLRPG------TKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM 360 (382)
T ss_dssp HHHCGGGG--GSEEEEEEEEEEEE------CSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHT
T ss_pred HHhCCCcC--CCceeeEEEEeccc------CCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHh
Confidence 34433321 11222222344443 356778888763 22456788899999888888888775
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.78 E-value=1.5e-17 Score=158.18 Aligned_cols=195 Identities=12% Similarity=0.039 Sum_probs=115.3
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEE-EEEcCCcEEEcCEEEECCCCCCc-cccccCCCC-Cceee
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSL-LICNDGVTIQAAVVLDATGFSRC-LVQYDKPYN-PGYQV 165 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vV~AdG~~s~-~r~~~~~~~-~~~~~ 165 (426)
+.++...+.+.|.+.+.+.|++++ +++|++++.+++++. |++.+| +++||.||.|+|.+|. +.+..+... .....
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~~ 222 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKIPIEP 222 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCCCCEE
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCcCCCe
Confidence 357899999999999999999999 899999998877777 878777 8999999999999983 444333320 11233
Q ss_pred EEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEec-ccCc-C--CCCCChH---HH
Q 014377 166 AYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEE-TSLV-A--RPGVPMK---DI 238 (426)
Q Consensus 166 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~-~~~~-~--~~~~~~~---~~ 238 (426)
..+..+.++..........+++.. ...+|+.|..++ +.++. +... . ....+.+ .+
T Consensus 223 ~~g~~~~~~~~~~~~~~~~~~~~~-----------------~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l 284 (382)
T 1y56_B 223 YKHQAVITQPIKRGTINPMVISFK-----------------YGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLREV 284 (382)
T ss_dssp EEEEEEEECCCSTTSSCSEEEEST-----------------TTTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHHHH
T ss_pred eEeEEEEEccCCcccCCCeEEecC-----------------CCeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHHHH
Confidence 445544443211111101222110 024778888877 66663 2111 1 1222332 22
Q ss_pred HHHHHHHHhhcCCccccccccceEeecCCCCCCCCCCceeEeeccCC---C--CCCCCcHHHHHHHHhcHHHHHHHHH
Q 014377 239 QERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAG---M--VHPSTGYMVARTLAAAPIVANAIVR 311 (426)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~liGdAa~---~--~~P~~G~G~~~a~~~a~~la~~i~~ 311 (426)
.+.+.++++.+ ...++...-.+..|+ .+|+.+++|...+ . ...++|.|+..+...|..+|+.|..
T Consensus 285 ~~~~~~~~p~l--~~~~~~~~~~g~r~~------t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 285 SYYFTKIIPAL--KNLLILRTWAGYYAK------TPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp HHHHHHHCGGG--GGSEEEEEEEEEEEE------CTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCc--CCCCceEEEEecccc------CCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 33333333332 112233333444453 3467777887542 1 2336778999998888888888774
No 33
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.75 E-value=5.7e-17 Score=154.07 Aligned_cols=194 Identities=14% Similarity=0.124 Sum_probs=114.2
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc-cccccCCCCCceeeEE
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC-LVQYDKPYNPGYQVAY 167 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~-~r~~~~~~~~~~~~~~ 167 (426)
+.++...+.+.|.+.+++.|++++ +++|++++.+++++.|++.+| +++||.||.|+|.+|. +.+.++..........
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~p~r 227 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKR 227 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCCCCCCEEEE
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCCCCceeeeE
Confidence 357899999999999999999999 999999999888888888877 8999999999999884 3333333211224455
Q ss_pred EEEEEeecCC-CCCCc-eeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCcC----CCCCChHHHHHH
Q 014377 168 GILAEVEEHP-FDLDK-MVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVA----RPGVPMKDIQER 241 (426)
Q Consensus 168 g~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~~----~~~~~~~~~~~~ 241 (426)
|..+.++.+. ..... +.+.+. ...+|+.|.. +++.++.+.... ....+...+. .
T Consensus 228 g~~~~~~~~~~~~~~~~p~~~~~------------------~~~~y~~p~~-g~~~ig~~~~~~~~~~~~~~~~~~~~-~ 287 (381)
T 3nyc_A 228 RSAFIFAPPPGIDCHDWPMLVSL------------------DESFYLKPDA-GMLLGSPANADPVEAHDVQPEQLDIA-T 287 (381)
T ss_dssp EEEEEECCCTTCCCTTCCEEEET------------------TSSCEEEEET-TEEEEECCCCEECCSSCCCCCHHHHH-H
T ss_pred EEEEEECCCcCCCcCccceEEeC------------------CCCEEEEeCC-CcEEEeCCcCCCCCcccCCCChHHHH-H
Confidence 5555554321 11111 111110 1235778887 777777654321 1122333332 2
Q ss_pred HHHHHhhc-CCccccccccceEeecCCCCCCCCCCceeEeeccCCC---C--CCCCcHHHHHHHHhcHHHHHHHH
Q 014377 242 MVARLKHL-GIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGM---V--HPSTGYMVARTLAAAPIVANAIV 310 (426)
Q Consensus 242 ~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~v~liGdAa~~---~--~P~~G~G~~~a~~~a~~la~~i~ 310 (426)
+.+.+..+ .+...++...-.+..|+ .+|+.+++|...+. + .-++|.|+..+...|..+|+.|.
T Consensus 288 ~~~~~~~~~~l~~~~~~~~w~G~r~~------t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~ 356 (381)
T 3nyc_A 288 GMYLIEEATTLTIRRPEHTWAGLRSF------VADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIR 356 (381)
T ss_dssp HHHHHHHHBSCCCCCCSEEEEEEEEE------CTTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCcccceeeeeEEcccc------CCCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHHh
Confidence 33333332 12222333333455443 35677788865321 1 12456677777766666666654
No 34
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.74 E-value=6.9e-17 Score=154.47 Aligned_cols=82 Identities=15% Similarity=0.132 Sum_probs=61.0
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC-ccccccCCCCCceeeEEE
Q 014377 91 RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSR-CLVQYDKPYNPGYQVAYG 168 (426)
Q Consensus 91 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s-~~r~~~~~~~~~~~~~~g 168 (426)
.++...+.+.|.+.+.+.|++++ +++|++++.+++++.|.+.++ +++||.||.|+|.++ .+++.++... ......+
T Consensus 149 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~-p~~~~~~ 226 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGARL-AYSVYEM 226 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCCC-CEEEEEE
T ss_pred EEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCCC-CeeEEEE
Confidence 46788899999999999999999 899999998888888877665 799999999999984 3444443322 2233444
Q ss_pred EEEEee
Q 014377 169 ILAEVE 174 (426)
Q Consensus 169 ~~~~~~ 174 (426)
..+.+.
T Consensus 227 ~~~~~~ 232 (397)
T 2oln_A 227 AIAAYR 232 (397)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 444443
No 35
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.73 E-value=6.9e-17 Score=154.85 Aligned_cols=193 Identities=14% Similarity=-0.004 Sum_probs=112.1
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe-EEEEEcCCcEEEcCEEEECCCCCC-ccccccCCCCCceeeE
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK-SLLICNDGVTIQAAVVLDATGFSR-CLVQYDKPYNPGYQVA 166 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~~g~~i~a~~vV~AdG~~s-~~r~~~~~~~~~~~~~ 166 (426)
+.++...+.+.|.+.+.+.|++++ +++|++++.++++ +.|++.+| +++||.||.|+|.+| .+++..+...+. ...
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~-~~~ 246 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPI-QSH 246 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCE-EEE
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCc-ccc
Confidence 357888999999999999999999 8999999987665 46777777 799999999999988 455544433322 223
Q ss_pred EEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCc-C--CCCCChH---HHHH
Q 014377 167 YGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLV-A--RPGVPMK---DIQE 240 (426)
Q Consensus 167 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~-~--~~~~~~~---~~~~ 240 (426)
.+..+.++........ .+++. ...+|+.|..++++.++.+... . ....+.+ .+.+
T Consensus 247 ~~~~~~~~~~~~~~~~-~~~~~------------------~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~ 307 (405)
T 2gag_B 247 PLQALVSELFEPVHPT-VVMSN------------------HIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMA 307 (405)
T ss_dssp EEEEEEEEEBCSCCCS-EEEET------------------TTTEEEEECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHH
T ss_pred ceeEEEecCCccccCc-eEEeC------------------CCcEEEEEcCCCcEEEEeccCCCCccccCCCHHHHHHHHH
Confidence 3333333211110111 11110 1347788988888777765331 1 1122222 2333
Q ss_pred HHHHHHhhcCCccccccccceEeecCCCCCCCCCCceeEeeccC--CCC--CCCCcHHHHHHHHhcHHHHHHHHH
Q 014377 241 RMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTA--GMV--HPSTGYMVARTLAAAPIVANAIVR 311 (426)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~liGdAa--~~~--~P~~G~G~~~a~~~a~~la~~i~~ 311 (426)
.+.++++.+ ...++...-.+..|+ ..|+.+++|+.. +.+ ..++|.|+..|...|..+|+.|..
T Consensus 308 ~~~~~~p~l--~~~~~~~~w~g~~~~------t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 308 AAVELFPIF--ARAHVLRTWGGIVDT------TMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp HHHHHCGGG--GGCEECEEEEEEEEE------ETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHH
T ss_pred HHHHhCCcc--ccCCcceEEeecccc------CCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhC
Confidence 333443332 112222223344443 357888999864 222 224556777777666666666653
No 36
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.72 E-value=6.1e-16 Score=146.20 Aligned_cols=201 Identities=12% Similarity=0.052 Sum_probs=112.6
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe-EEEEEcCC--cEEEcCEEEECCCCCCc-ccccc-CCC---CC
Q 014377 91 RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK-SLLICNDG--VTIQAAVVLDATGFSRC-LVQYD-KPY---NP 161 (426)
Q Consensus 91 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~~g--~~i~a~~vV~AdG~~s~-~r~~~-~~~---~~ 161 (426)
.++...+.+.|.+.+++.|++++ +++|++++.++++ +.|.+.+| .+++||.||.|+|.+|. +.+.+ +.. ..
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~ 225 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIP 225 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGGSC
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCCccccc
Confidence 47889999999999999999999 9999999988665 88888887 48999999999999983 33333 322 12
Q ss_pred ceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCc---CCCCCCh---
Q 014377 162 GYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLV---ARPGVPM--- 235 (426)
Q Consensus 162 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~---~~~~~~~--- 235 (426)
......|..+.++.. ......++. .+..+. .+ ++..+..++.+.++.+... .....+.
T Consensus 226 ~i~p~rG~~~~~~~~-~~~~~~~~~---~p~~~~-----------~~-~~~~~~~~g~~~iG~t~e~~~~~~~~~~~~~~ 289 (369)
T 3dme_A 226 PEYLCKGSYFTLAGR-APFSRLIYP---VPQHAG-----------LG-VHLTLDLGGQAKFGPDTEWIATEDYTLDPRRA 289 (369)
T ss_dssp CCEEEEEEEEECSSS-CSCSSEEEE---CTTCSS-----------CC-CCEEECTTSCEEECCCCEEESSCCCCCCGGGG
T ss_pred eeeecceEEEEECCC-CccCceeec---CCCCCC-----------ce-EEEeCccCCcEEECCCcccccccccccCHHHH
Confidence 234456666655432 112222111 110000 11 2233444555666654321 1222233
Q ss_pred HHHHHHHHHHHhhcCCccccccccceEeecCCCCCCCCCCceeEe-ecc----CCCCCC--CCcHHHHHHHHhcHHHHHH
Q 014377 236 KDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGI-GGT----AGMVHP--STGYMVARTLAAAPIVANA 308 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~li-GdA----a~~~~P--~~G~G~~~a~~~a~~la~~ 308 (426)
+.+.+.+.++++.+ ...++.+.-.+..|.... +...++.+++ |.. .+.+.- +.|.|+..+...|..+++.
T Consensus 290 ~~l~~~~~~~~P~l--~~~~v~~~w~G~Rp~~~~-~~~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~t~ap~~a~~~a~~ 366 (369)
T 3dme_A 290 DVFYAAVRSYWPAL--PDGALAPGYTGIRPKISG-PHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLAR 366 (369)
T ss_dssp GGHHHHHHTTCTTC--CTTCCEEEEEEEEEESSC-TTSCCCCCEEECHHHHCCTTEEEEECCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCC--ChhhceecceeccccccC-CCCCcCCeEEecccccCCCCEEEEeCCCCchHhccHHHHHHHHHH
Confidence 23444444444432 223344445666675321 1123344444 652 222221 3455888887777777776
Q ss_pred HH
Q 014377 309 IV 310 (426)
Q Consensus 309 i~ 310 (426)
|.
T Consensus 367 i~ 368 (369)
T 3dme_A 367 LA 368 (369)
T ss_dssp HC
T ss_pred hh
Confidence 53
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.72 E-value=1.3e-15 Score=155.20 Aligned_cols=192 Identities=14% Similarity=0.098 Sum_probs=116.8
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc-cccccCCCCCceeeEE
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC-LVQYDKPYNPGYQVAY 167 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~-~r~~~~~~~~~~~~~~ 167 (426)
+.++...+...|.+.+.+.|++++ +++|++++.+++++.|++.+|.+++||.||.|+|.+|. +.+... .......
T Consensus 412 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~---lpl~p~r 488 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTST---LPVYSVA 488 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTT---CSCEEEE
T ss_pred eeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccC---Ccceeec
Confidence 357889999999999999999999 99999999998899999988889999999999999875 222221 1223455
Q ss_pred EEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCC--CCeEEEecccCcCC--CCCChHH---HHH
Q 014377 168 GILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFS--SNRIFLEETSLVAR--PGVPMKD---IQE 240 (426)
Q Consensus 168 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~--~~~~~v~~~~~~~~--~~~~~~~---~~~ 240 (426)
|..+.++..+......... .. . .|+.|.. ++.+.++.+..... ...+.++ +.+
T Consensus 489 Gq~~~~~~~~~~~~l~~~l--------------~~----~--~Yl~P~~~~~g~~~iG~t~~~~~~d~~~~~~~~~~~l~ 548 (676)
T 3ps9_A 489 GQVSHIPTTPELAELKQVL--------------CY----D--GYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQ 548 (676)
T ss_dssp EEEEEEECCTTGGGCCSEE--------------ES----S--SEECCCBTTTTEEEEECCCEETCCCCCCCHHHHHHHHH
T ss_pred CEEEEECCCcccccCCcee--------------EC----C--eeeccccCCCCeEEEeeccCCCCCCCCCCHHHHHHHHH
Confidence 6655554221100000000 00 1 5678887 78888886644222 2334333 333
Q ss_pred HHHHHHhhcCCc--c-ccccccceEeecCCCCCCCCCCceeEeeccCC----------------------------CCCC
Q 014377 241 RMVARLKHLGIK--V-RSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAG----------------------------MVHP 289 (426)
Q Consensus 241 ~~~~~~~~~~~~--~-~~~~~~~~~~~p~~~~~~~~~~~v~liGdAa~----------------------------~~~P 289 (426)
.+.+.++.+.+. . ..+.....+..|+ .+|+.++||.... ....
T Consensus 549 ~l~~~~P~l~~~~~~d~~~~~~~~G~R~~------t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~l~~a~G 622 (676)
T 3ps9_A 549 RLIDCFPQAQWAKEVDVSDKEARCGVRCA------TRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAA 622 (676)
T ss_dssp HHHHHSTTCHHHHTCCCTTCCEEEEEEEE------CTTCCCEEEEEECHHHHHHHTTTTTSCCTTCCSCCEEEEEEEEEC
T ss_pred HHHHhCCCccccccCcccccceEEEEeCc------cCCcCCccCcCCChHHHHHHHHhhhccccccccCCCCCCEeeeec
Confidence 344444432110 0 1122333344333 4577777775432 1223
Q ss_pred CCcHHHHHHHHhcHHHHHHHH
Q 014377 290 STGYMVARTLAAAPIVANAIV 310 (426)
Q Consensus 290 ~~G~G~~~a~~~a~~la~~i~ 310 (426)
++|.|+..|...|..+|+.|.
T Consensus 623 ~g~~Gl~~Ap~~ae~lA~~i~ 643 (676)
T 3ps9_A 623 LGSRGLCSAPLCAEILAAQMS 643 (676)
T ss_dssp CTTCHHHHHHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHHHHHHc
Confidence 567788888877777777664
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.72 E-value=6.8e-16 Score=157.54 Aligned_cols=191 Identities=15% Similarity=0.117 Sum_probs=115.9
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCc-EEEcCEEEECCCCCCcc-ccccCCCCCceeeEE
Q 014377 91 RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGV-TIQAAVVLDATGFSRCL-VQYDKPYNPGYQVAY 167 (426)
Q Consensus 91 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~-~i~a~~vV~AdG~~s~~-r~~~~~~~~~~~~~~ 167 (426)
.++...+.+.|.+.+.+.|++++ +++|++++.+++++.|.+.+|. +++||.||.|+|.+|.- .+... .......
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~---lpl~p~r 484 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHH---LPLSAVR 484 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTT---SCCEEEE
T ss_pred EECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccC---Ccccccc
Confidence 47889999999999999999998 9999999998888989998887 89999999999998752 22221 1223455
Q ss_pred EEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCC--CCeEEEecccCcCC--CCCChH---HHHH
Q 014377 168 GILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFS--SNRIFLEETSLVAR--PGVPMK---DIQE 240 (426)
Q Consensus 168 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~--~~~~~v~~~~~~~~--~~~~~~---~~~~ 240 (426)
|..+.++..+........+ . .. .|+.|.. ++.+.++.+..... ...+.+ ++.+
T Consensus 485 Gq~~~~~~~~~~~~l~~v~--------------~-----~~-~Yl~P~~~~~g~~~iGat~~~~~~d~~~~~~~~~~ll~ 544 (689)
T 3pvc_A 485 GQVSHIPTTPVLSQLQQVL--------------C-----YD-GYLTPVNPANQHHCIGASYQRGDIATDFRLTEQQENRE 544 (689)
T ss_dssp EEEEEEECCTTGGGCCSEE--------------E-----SS-SEECCCBTTTTEEEEECCCEETBCCCCCCHHHHHHHHH
T ss_pred CcEEEECCCCccccCCeeE--------------e-----CC-ceEccccCCCCeEEEEEeccCCCCCCCCCHHHHHHHHH
Confidence 6655554321100000000 0 01 5788987 78888887644322 233333 3344
Q ss_pred HHHHHHhhcCCcc---ccccccceEeecCCCCCCCCCCceeEeeccCC--------------------------------
Q 014377 241 RMVARLKHLGIKV---RSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAG-------------------------------- 285 (426)
Q Consensus 241 ~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~~v~liGdAa~-------------------------------- 285 (426)
.+.+.++.+.+.. ..+.....+..| ..+|+.++||....
T Consensus 545 ~l~~~~P~l~~~~~~~~~~~~~w~G~R~------~t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~ 618 (689)
T 3pvc_A 545 RLLRCLPQVSWPQQVDVSDNQARCGVRC------AIRDHLPMVGAVPDYAATLAQYQDLSRRIQHGGESEVNDIAVAPVW 618 (689)
T ss_dssp HHHHHCTTCSGGGGCCCTTCCEEEEEEE------ECTTSCCEEEEEECHHHHHHHSTTHHHHC--------CCCCCCCEE
T ss_pred HHHHhCCCccccccccccccceeEEEee------ecCCCCcccCcCCCHHHHHHHHHhhhccccccccccccccccCCCC
Confidence 4444444432110 111222333333 34577788875432
Q ss_pred ----CCCCCCcHHHHHHHHhcHHHHHHHH
Q 014377 286 ----MVHPSTGYMVARTLAAAPIVANAIV 310 (426)
Q Consensus 286 ----~~~P~~G~G~~~a~~~a~~la~~i~ 310 (426)
....++|.|+..|...|..+|+.|.
T Consensus 619 ~~l~~a~G~g~~Gl~~ap~~ae~lA~~i~ 647 (689)
T 3pvc_A 619 PELFMVGGLGSRGLCSAPLVAEILAAQMF 647 (689)
T ss_dssp EEEEEEECCTTCHHHHHHHHHHHHHHHHT
T ss_pred CChHHhhcccccHHHHHHHHHHHHHHHHc
Confidence 1223567788888877777777664
No 39
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.70 E-value=6e-16 Score=147.44 Aligned_cols=195 Identities=10% Similarity=0.048 Sum_probs=112.5
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc-cccccCCCCCceeeEE
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC-LVQYDKPYNPGYQVAY 167 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~-~r~~~~~~~~~~~~~~ 167 (426)
+.++...+.+.|.+.+.+.|++++ +++|++++.+++++.|++.+| +++||.||.|+|.++. +.+.++... ......
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g~~~-pl~~~r 222 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLNLDI-PLQPYR 222 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGTEEC-CCEEEE
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhccCC-ceEEEE
Confidence 357888999999999999999999 899999998877788877665 7999999999999874 222222111 123345
Q ss_pred EEEEEeecCC--CC--CCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCC-eEEEecccC-----cC--CCCC--
Q 014377 168 GILAEVEEHP--FD--LDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSN-RIFLEETSL-----VA--RPGV-- 233 (426)
Q Consensus 168 g~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-~~~v~~~~~-----~~--~~~~-- 233 (426)
|..+.++... .. ...+.+.. .. ..+.+|.+|..++ .+.++.+.. .. ....
T Consensus 223 g~~~~~~~~~~~~~~~~~~p~~~~-------------~~---~~~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~ 286 (389)
T 2gf3_A 223 QVVGFFESDESKYSNDIDFPGFMV-------------EV---PNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGV 286 (389)
T ss_dssp EEEEEECCCHHHHBGGGTCCEEEE-------------EE---TTEEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTS
T ss_pred EEEEEEecCcccccccccCCEEEE-------------eC---CCCcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCC
Confidence 5555443211 00 00011111 00 0246888998887 777765431 01 1112
Q ss_pred ChH---HHHHHHHHHHhhcCCccccccccceEeecCCCCCCCCCCceeEeeccCC---C--CCCCCcHHHHHHHHhcHHH
Q 014377 234 PMK---DIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAG---M--VHPSTGYMVARTLAAAPIV 305 (426)
Q Consensus 234 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~liGdAa~---~--~~P~~G~G~~~a~~~a~~l 305 (426)
+.+ .+.+.+.++++.+.. ++.....+..|. .+|+.+++|...+ . ..-++|.|+..+...|..+
T Consensus 287 ~~~~~~~l~~~~~~~~P~l~~---~~~~~w~g~r~~------t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~l 357 (389)
T 2gf3_A 287 YPEDESNLRAFLEEYMPGANG---ELKRGAVCMYTK------TLDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVL 357 (389)
T ss_dssp SHHHHHHHHHHHHHHCGGGCS---CEEEEEEEEEEE------CTTSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCC---CceEEEEEEecc------CCCCCeEEccCCCCCCEEEEECCccccccccHHHHHHH
Confidence 333 233333344443321 233333444443 3567788887431 1 1224566777777777777
Q ss_pred HHHHHH
Q 014377 306 ANAIVR 311 (426)
Q Consensus 306 a~~i~~ 311 (426)
|+.|..
T Consensus 358 a~~i~~ 363 (389)
T 2gf3_A 358 SQLALT 363 (389)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 776663
No 40
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.70 E-value=4.5e-15 Score=145.96 Aligned_cols=206 Identities=11% Similarity=0.043 Sum_probs=121.1
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEc---CCc--EEEcCEEEECCCCCCcc-ccc-cCCC-C
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICN---DGV--TIQAAVVLDATGFSRCL-VQY-DKPY-N 160 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~---~g~--~i~a~~vV~AdG~~s~~-r~~-~~~~-~ 160 (426)
+.++...+...|.+.+.+.|++++ +++|++++.+++.+.|++. +|+ +++||.||.|+|.+|.. .+. +... .
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~ 223 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSP 223 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCS
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcc
Confidence 347999999999999999999999 8999999988776677763 564 79999999999999853 331 2211 1
Q ss_pred CceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCcC-----CCCCCh
Q 014377 161 PGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVA-----RPGVPM 235 (426)
Q Consensus 161 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~~-----~~~~~~ 235 (426)
.......|..+.++ ...+.....+.. .. + ...+|++|..++.+.++.+.... .+..+.
T Consensus 224 ~~i~p~rG~~~~~~-~~~~~~~~~~~~--~~--d------------g~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~ 286 (501)
T 2qcu_A 224 YGIRLIKGSHIVVP-RVHTQKQAYILQ--NE--D------------KRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEE 286 (501)
T ss_dssp SCBCCEEEEEEEEE-CSSSCSCEEEEE--CT--T------------SCEEEEEEETTTEEEEECCCEECCSCGGGCCCCH
T ss_pred cccccceeEEEEEC-CCCCCceEEEee--cC--C------------CCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCH
Confidence 12334556666555 222222222221 00 0 25689999988888888764321 123333
Q ss_pred HH---HHHHHHHHHhhcCCccccccccceEeecCCCC-CCC----CCCceeE--eeccCCCCCCCCcHHHHHHHHhcHHH
Q 014377 236 KD---IQERMVARLKHLGIKVRSIEEDEHCVIPMGGP-LPV----LPQRVVG--IGGTAGMVHPSTGYMVARTLAAAPIV 305 (426)
Q Consensus 236 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~----~~~~v~l--iGdAa~~~~P~~G~G~~~a~~~a~~l 305 (426)
++ +.+.+.++++ ..+...++...-.+..|+... .|. ..+.++. .++..+.+-..+|.|+..+-.-|..+
T Consensus 287 ~~~~~l~~~~~~~~p-~~l~~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~ 365 (501)
T 2qcu_A 287 SEINYLLNVYNTHFK-KQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHA 365 (501)
T ss_dssp HHHHHHHHHHHHHBS-SCCCGGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-CCCCcccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHH
Confidence 33 3333334444 112233445555677776532 221 2244554 45544444455666666554445555
Q ss_pred HHHHHHhc
Q 014377 306 ANAIVRSL 313 (426)
Q Consensus 306 a~~i~~~l 313 (426)
++.+.+.+
T Consensus 366 ~~~~~~~~ 373 (501)
T 2qcu_A 366 LEKLTPYY 373 (501)
T ss_dssp HHHHGGGS
T ss_pred HHHHHHhh
Confidence 55555544
No 41
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.70 E-value=1.1e-15 Score=151.92 Aligned_cols=205 Identities=18% Similarity=0.255 Sum_probs=122.8
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEEcC---C--cEEEcCEEEECCCCCC-ccccccCCC-CC
Q 014377 91 RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLICND---G--VTIQAAVVLDATGFSR-CLVQYDKPY-NP 161 (426)
Q Consensus 91 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~---g--~~i~a~~vV~AdG~~s-~~r~~~~~~-~~ 161 (426)
.++...+...|.+.+.+.|++++ +++|+++..+++++ .|++.+ | .+++||.||.|+|.+| .+++..+.. ..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~~~~ 245 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKHGK 245 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCCCSS
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCCCCc
Confidence 47889999999999999999999 89999999988764 465543 3 4799999999999998 445544433 12
Q ss_pred ceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCc-----CCCCCChH
Q 014377 162 GYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLV-----ARPGVPMK 236 (426)
Q Consensus 162 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~-----~~~~~~~~ 236 (426)
......|..+.++....+....++.... + + ..++|++|. ++.+.++.|... ..+..+.+
T Consensus 246 ~v~p~kG~~lvl~~~~~~~~~~~~~~~~-~--d------------gr~v~~iP~-~g~~~iGtT~~~~~~~~~~~~~t~~ 309 (561)
T 3da1_A 246 YLKLSKGVHLVVDQSRFPLRQAVYFDTE-S--D------------GRMIFAIPR-EGKTYIGTTDTFYDKDIASPRMTVE 309 (561)
T ss_dssp EEEEEEEEEEEEEGGGSCCSSEEEECCS-S--S------------CCCEEEEEE-TTEEEECCCCEEECSCTTCCCCCHH
T ss_pred eEEeccEEEEEECCccCCCceEEEeccC-C--C------------CcEEEEEec-CCCEEEcCCCCccCCCcCCCCCCHH
Confidence 3345677777666433333444433210 0 1 246788999 567778876532 12344544
Q ss_pred HH---HHHHHHHHhhcCCccccccccceEeecCCCC---CCC--CCCceeEeeccCCCCCCCCcHHHHHHHHhcHHHHHH
Q 014377 237 DI---QERMVARLKHLGIKVRSIEEDEHCVIPMGGP---LPV--LPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANA 308 (426)
Q Consensus 237 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~--~~~~v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~ 308 (426)
++ .+.+.++++.+.+...++...-.+..|+... .+. ..+.++..+ ..++++-++|. +...-.=|..+.+.
T Consensus 310 ~i~~ll~~~~~~~P~l~~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~-~~gli~i~Ggk-~Tt~r~mAe~~~d~ 387 (561)
T 3da1_A 310 DRDYILAAANYMFPSLRLTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFS-DSGLISIAGGK-LTGYRKMAERTVDA 387 (561)
T ss_dssp HHHHHHHHHHHHCTTCCCCTTTEEEEEEEEEEEEEC-----------CCEEEC-SSCCEEECCCC-STTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCChhhEEEEeEEeccccCCCCCCccccccceEEEec-CCCeEEEeCCh-hhhHHHHHHHHHHH
Confidence 43 3344455554433345556666777776321 111 223344443 46676766666 44333334555555
Q ss_pred HHHhc
Q 014377 309 IVRSL 313 (426)
Q Consensus 309 i~~~l 313 (426)
+.+.+
T Consensus 388 ~~~~~ 392 (561)
T 3da1_A 388 VAQGL 392 (561)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 55555
No 42
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.65 E-value=1.5e-15 Score=147.18 Aligned_cols=62 Identities=21% Similarity=0.252 Sum_probs=56.4
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EE---EEEEEEEeCCeEE-EEEcCCcEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QA---KVIKVIHEESKSL-LICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~---~v~~i~~~~~~~~-v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
+.++...+.+.|.+.+++.|++++ ++ +|++++.++++++ |++.+|++++||.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 567888999999999999999999 88 9999998888887 89999989999999999999885
No 43
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.63 E-value=3.9e-15 Score=140.95 Aligned_cols=61 Identities=18% Similarity=0.176 Sum_probs=53.7
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
+.++...+.+.|.+.+.+.|++++ +++|++++.+++++.|++.+| +++||.||.|+|.+|.
T Consensus 144 g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred cEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 357888999999999999999999 899999998877788888777 5999999999999874
No 44
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.61 E-value=9.7e-15 Score=139.76 Aligned_cols=195 Identities=15% Similarity=0.133 Sum_probs=108.5
Q ss_pred CcCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCC--ccc--chhH-H-------H--hhcCchhh-h----
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPN--NYG--VWVD-E-------F--EAMDLLDC-L---- 66 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~--~~g--~~~~-~-------l--~~~~~~~~-~---- 66 (426)
.++||+|||||++|+++|+.|+++ |++|+|||+........ ..| .|.. . + ..+.+... .
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGK 114 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCC
Confidence 358999999999999999999999 99999999975432110 111 1100 0 0 00000000 0
Q ss_pred hhcc--CCeEEEecCCC---------------------------ccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEE
Q 014377 67 DTTW--SGAVVHIDDNT---------------------------KKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAK 116 (426)
Q Consensus 67 ~~~~--~~~~~~~~~~~---------------------------~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~ 116 (426)
...+ .+......... ........+.++...+.+.|.+.+.+.|++++ +++
T Consensus 115 ~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~ 194 (405)
T 3c4n_A 115 TLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTR 194 (405)
T ss_dssp CCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCE
T ss_pred CCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCE
Confidence 0000 01000000000 00001122457889999999999999999999 899
Q ss_pred EE---------EEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC-cccc-ccCCCCCceeeEEEEEEEeecCCCCCCceee
Q 014377 117 VI---------KVIHEESKSLLICNDGVTIQAAVVLDATGFSR-CLVQ-YDKPYNPGYQVAYGILAEVEEHPFDLDKMVF 185 (426)
Q Consensus 117 v~---------~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s-~~r~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 185 (426)
|+ +++.+++++.|++.+| +++||.||.|+|.+| .+++ .++.... ....+|..+.+..+. ......+
T Consensus 195 v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~~~-~~~~~g~~~~~~~~~-~~~~~~~ 271 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLHTR-HGRAYRQFPRLDLLS-GAQTPVL 271 (405)
T ss_dssp EEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCCCC-CEEEEEECCEECSCC-CTTCCEE
T ss_pred EEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCCCCC-cccceeEEEEECCCC-ccCCCeE
Confidence 99 8877666676666666 899999999999998 4555 4443222 133445544443211 1100111
Q ss_pred eecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecc
Q 014377 186 MDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEET 225 (426)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~ 225 (426)
. ...+|+.|..++.+.++.+
T Consensus 272 ~--------------------~~~~y~~p~~~g~~~~G~t 291 (405)
T 3c4n_A 272 R--------------------ASGLTLRPQNGGYTLVPAI 291 (405)
T ss_dssp E--------------------ETTEEEEEETTEEEEECCC
T ss_pred E--------------------CCcEEEEEcCCCeEEEecc
Confidence 0 0236888988887777655
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.59 E-value=5.4e-15 Score=141.29 Aligned_cols=141 Identities=17% Similarity=0.155 Sum_probs=92.8
Q ss_pred CCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCC------ccc-----c------------hhHHHhhcC
Q 014377 5 SKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPN------NYG-----V------------WVDEFEAMD 61 (426)
Q Consensus 5 ~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~------~~g-----~------------~~~~l~~~~ 61 (426)
||+.++||+|||||++|+++|+.|++.|.+|+|||+.+..+..- .|. . ....+....
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYR 102 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSC
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcC
Confidence 45567999999999999999999999999999999987642100 000 0 001111111
Q ss_pred chhhhhhcc-CCeEEEecCCCccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEc
Q 014377 62 LLDCLDTTW-SGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQA 139 (426)
Q Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a 139 (426)
..+.+.... .+........ ...+....+..+.+.|.+.+.+.|++++ +++|++++.+++++.|.+.+| +++|
T Consensus 103 ~~~~~~~~~~~Gi~~~~~~~-----g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~a 176 (417)
T 3v76_A 103 PQDFVALVERHGIGWHEKTL-----GQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDA 176 (417)
T ss_dssp HHHHHHHHHHTTCCEEECST-----TEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEE
T ss_pred HHHHHHHHHHcCCCcEEeeC-----CEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEe
Confidence 111111000 0111111110 0111235678899999999998999999 999999999888899998888 8999
Q ss_pred CEEEECCCCCCc
Q 014377 140 AVVLDATGFSRC 151 (426)
Q Consensus 140 ~~vV~AdG~~s~ 151 (426)
|.||+|+|.+|.
T Consensus 177 d~VIlAtG~~S~ 188 (417)
T 3v76_A 177 ASLVVASGGKSI 188 (417)
T ss_dssp SEEEECCCCSSC
T ss_pred eEEEECCCCccC
Confidence 999999999983
No 46
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.58 E-value=3.3e-14 Score=138.07 Aligned_cols=204 Identities=12% Similarity=0.074 Sum_probs=109.6
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEE---------------eCCeE-EEEEcCCcEE--EcCEEEECCCCCCc
Q 014377 91 RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIH---------------EESKS-LLICNDGVTI--QAAVVLDATGFSRC 151 (426)
Q Consensus 91 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~---------------~~~~~-~v~~~~g~~i--~a~~vV~AdG~~s~ 151 (426)
.++...+.+.|.+.+.+.|++++ +++|++++. +++++ .|.+.+| ++ +||.||.|+|.+|.
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred EEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 47888999999999999999999 899999987 45554 5777777 68 99999999999875
Q ss_pred -cccccCCCCCceeeEEEEEEEeecCCCCCCc-eeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCC-CeEEEecccCc
Q 014377 152 -LVQYDKPYNPGYQVAYGILAEVEEHPFDLDK-MVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSS-NRIFLEETSLV 228 (426)
Q Consensus 152 -~r~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~-~~~~v~~~~~~ 228 (426)
+.+.++... ......|..+.++........ .....+... ...+.+.. ...+|+.|..+ +.+.++.+...
T Consensus 256 ~l~~~~g~~~-~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~-----~~~~y~~p~~~~g~~~iG~~~~~ 327 (448)
T 3axb_A 256 RLLNPLGIDT-FSRPKKRMVFRVSASTEGLRRIMREGDLAGA--GAPPLIIL-----PKRVLVRPAPREGSFWVQLSDNL 327 (448)
T ss_dssp HHHGGGTCCC-SEEEEEEEEEEEECCSHHHHHHHHHCCTTSS--SSCCEEEE-----TTTEEEEEETTTTEEEEEECCCT
T ss_pred HHHHHcCCCC-cccccceEEEEeCCccccccccccccccccc--CCCceEEc-----CCceEEeecCCCCeEEEecCCcc
Confidence 444433222 223455555555422100000 000000000 00000000 02367889887 78888776532
Q ss_pred C---C--C--CCChHH----HHHHHHHHHhhcCCccccccccceEeecCCCCCCCCCCceeEeeccC-CCC--CCCCcHH
Q 014377 229 A---R--P--GVPMKD----IQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTA-GMV--HPSTGYM 294 (426)
Q Consensus 229 ~---~--~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~liGdAa-~~~--~P~~G~G 294 (426)
. . . ..+.+. +.+.+.++++.+. ..++...-.+..|.. ..|+.+++|... +.+ .-++|.|
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~--~~~~~~~w~G~r~~~-----t~d~~p~ig~~~~~l~~a~G~~g~G 400 (448)
T 3axb_A 328 GRPFALEEDPQPEEHYYSLAILPILSLYLPQFQ--DAYPSGGWAGHYDIS-----FDANPVVFEPWESGIVVAAGTSGSG 400 (448)
T ss_dssp TSCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGT--TCCCSEEEEEEEEEE-----TTSSCEEECGGGCSEEEEECCTTCC
T ss_pred cCCcccccccCCChHHHHHHHHHHHHHhCcCcc--cCCcccceEEEeccc-----cCCCCcEeeecCCCEEEEECCCchh
Confidence 1 1 1 223222 3333334444321 122333334444541 345667777543 111 1134557
Q ss_pred HHHHHHhcHHHHHHHH
Q 014377 295 VARTLAAAPIVANAIV 310 (426)
Q Consensus 295 ~~~a~~~a~~la~~i~ 310 (426)
+..+...|..+|+.|.
T Consensus 401 ~~~ap~~g~~la~~i~ 416 (448)
T 3axb_A 401 IMKSDSIGRVAAAVAL 416 (448)
T ss_dssp GGGHHHHHHHHHHHHT
T ss_pred HhHhHHHHHHHHHHHc
Confidence 7766665666665554
No 47
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.56 E-value=1.3e-13 Score=129.96 Aligned_cols=268 Identities=14% Similarity=0.062 Sum_probs=143.6
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCC-----C--Ccccchh--------H-----------HHhh
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIW-----P--NNYGVWV--------D-----------EFEA 59 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~-----~--~~~g~~~--------~-----------~l~~ 59 (426)
|..++||+|||||++|+++|+.|+++|.+|+|||+.....- . ...+.+. . .+.+
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVE 82 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHHH
Confidence 55679999999999999999999999999999999753210 0 0011110 0 0111
Q ss_pred cCchhhhhhccCCeEEEecCC--------C-----ccccC------C------CccccCHHHHHHHHHHHHHhCCcEEEE
Q 014377 60 MDLLDCLDTTWSGAVVHIDDN--------T-----KKDLD------R------PYGRVNRKLLKSKMLQKCITNGVKFHQ 114 (426)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~--------~-----~~~~~------~------~~~~v~r~~l~~~L~~~~~~~gv~~~~ 114 (426)
+.-.+ ....+.......... . ...++ . .-+.++...+...|.+.+.+.|++++.
T Consensus 83 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~p~~~~g~~~~~~~v~p~~~~~~l~~~~~~~G~~i~~ 161 (363)
T 1c0p_A 83 LVPTG-HAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFER 161 (363)
T ss_dssp HTTTT-SSEEEEEEEEEESSGGGGGGGTTTTTSTTCEECCGGGSSTTCEEEEEEEEECCHHHHHHHHHHHHHHTTCEEEE
T ss_pred hCccc-CCeEEECCEEEEecCccchhHHHHHhCCCcEECCHHHCCCceEEEEEecceecHHHHHHHHHHHHHHCCCEEEE
Confidence 10000 000000000011000 0 00000 0 113579999999999999999999876
Q ss_pred EEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCccccccCCCCCceeeEEEEEEEeecCCCCCCceeeeecCCCcCC
Q 014377 115 AKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLN 194 (426)
Q Consensus 115 ~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (426)
++|++++.+ .+ +||.||.|+|.+|.-. ............|..+.++... .... +.... .
T Consensus 162 ~~v~~l~~~-----------~~-~a~~VV~A~G~~s~~l--~~~~~~~~~p~rg~~~~~~~~~-~~~~---~~~~~-~-- 220 (363)
T 1c0p_A 162 RTVTSLEQA-----------FD-GADLVVNATGLGAKSI--AGIDDQAAEPIRGQTVLVKSPC-KRCT---MDSSD-P-- 220 (363)
T ss_dssp CCCSBGGGT-----------CS-SCSEEEECCGGGGGTS--BTTCCTTEEEEEEEEEEEECCC-CCCE---EECSC-T--
T ss_pred EEcccHhhc-----------Cc-CCCEEEECCCcchhhc--cCcccCCccccCCeEEEEeCCc-ccce---Eeecc-C--
Confidence 666665432 12 7999999999998532 2111223344666666555322 1111 10000 0
Q ss_pred CchhhhccCCCCCcEEEEeeCCCCeEEEecccCcCC--CCCChH---HHHHHHHHHHhhcCC----ccccccccceEeec
Q 014377 195 NNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVAR--PGVPMK---DIQERMVARLKHLGI----KVRSIEEDEHCVIP 265 (426)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~p 265 (426)
....|++|..++.+.++.+..... ...+.+ .+.+.+.++++.+.. ...++...-.+..|
T Consensus 221 ------------~~~~y~~p~~~g~~~iG~t~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~~~i~~~w~G~rp 288 (363)
T 1c0p_A 221 ------------ASPAYIIPRPGGEVICGGTYGVGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLRP 288 (363)
T ss_dssp ------------TCCEEEEEETTTEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGSSSSSGGGCEEEEEEEEEEE
T ss_pred ------------CCcEEEEEcCCCEEEEEeeeccCCCCCCCCHHHHHHHHHHHHHhCccccCCcccccceEeeceEEECC
Confidence 122788898888888887644222 222333 334444445444321 11233444445555
Q ss_pred CCCCCCCCCCceeEeec---------------------cCCC-------CCCCCcHHHHHHHHhcHHHHHHHHHhc
Q 014377 266 MGGPLPVLPQRVVGIGG---------------------TAGM-------VHPSTGYMVARTLAAAPIVANAIVRSL 313 (426)
Q Consensus 266 ~~~~~~~~~~~v~liGd---------------------Aa~~-------~~P~~G~G~~~a~~~a~~la~~i~~~l 313 (426)
+. +|+.+++|. ..+. ..-++|.|+..+...|..+|+.|...+
T Consensus 289 ~t------~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g~G~~~a~~~g~~~a~li~~~l 358 (363)
T 1c0p_A 289 AR------RGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLVDEAF 358 (363)
T ss_dssp EE------TTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CC------CCCceeEEEecccccccccCccccccccccccccccceEEEecCCCCcchheeccHHHHHHHHHHHHH
Confidence 32 344444443 2111 122567799999888888888887543
No 48
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.54 E-value=6e-12 Score=123.92 Aligned_cols=61 Identities=15% Similarity=0.095 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEE-EEEcCCcEEEcCEEEECCCCCCccccc
Q 014377 95 KLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSL-LICNDGVTIQAAVVLDATGFSRCLVQY 155 (426)
Q Consensus 95 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vV~AdG~~s~~r~~ 155 (426)
..+.+.|.+.+++.|++++ +++|++|+.++++++ |+++||+++.||.||.+.+.....+..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~L 283 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDL 283 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--------
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHh
Confidence 3566778888888999999 999999999988875 889999999999999988877665544
No 49
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.53 E-value=1.6e-12 Score=129.43 Aligned_cols=162 Identities=17% Similarity=0.253 Sum_probs=96.3
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEEc---CC--cEEEcCEEEECCCCCCc-cccccCCCC--
Q 014377 91 RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLICN---DG--VTIQAAVVLDATGFSRC-LVQYDKPYN-- 160 (426)
Q Consensus 91 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~---~g--~~i~a~~vV~AdG~~s~-~r~~~~~~~-- 160 (426)
.++...+...|.+.+.+.|++++ +++|++++.+++++ .|++. +| .+++||.||.|+|.++. +.+..+...
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~~~~~ 263 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVS 263 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCSSCCC
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhccCccC
Confidence 46788899999999999999999 99999999887764 35542 23 37999999999999984 333332211
Q ss_pred CceeeEEEEEEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCc---C--CCCCCh
Q 014377 161 PGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLV---A--RPGVPM 235 (426)
Q Consensus 161 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~---~--~~~~~~ 235 (426)
.......|..+.++....+....++++.... + ...+|++|.. +.+.++.|... . .+..+.
T Consensus 264 ~~i~p~rG~~l~~~~~~~~~~~~~~~~~~~~--d------------gr~~~~~P~~-~~~~iG~t~~~~~~~~~~~~~~~ 328 (571)
T 2rgh_A 264 PKMRPTKGIHLVVDAKKLPVPQPTYFDTGKQ--D------------GRMVFAIPRE-NKTYFGTTDTDYQGDFTDPKVTQ 328 (571)
T ss_dssp CCBCCEEEEEEEEEGGGSCCSSCEEEECSSS--S------------SCEEEEEEET-TEEEECCCCEECCSCSSSCCCCH
T ss_pred ceeeccceEEEEeccccCCCCcEEEEeccCC--C------------CcEEEEEEcC-CeEEEcCCCcCCCCCcCCCCCCH
Confidence 2234466777666532222222333321000 0 2467889986 56777766431 1 233344
Q ss_pred HH---HHHHHHHHHhhcCCccccccccceEeecCC
Q 014377 236 KD---IQERMVARLKHLGIKVRSIEEDEHCVIPMG 267 (426)
Q Consensus 236 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 267 (426)
++ +.+.+.++++...+...++...-.+..|+.
T Consensus 329 ~~~~~ll~~~~~~~P~~~l~~~~v~~~waG~Rp~~ 363 (571)
T 2rgh_A 329 EDVDYLLDVINHRYPEANITLADIEASWAGLRPLL 363 (571)
T ss_dssp HHHHHHHHHHHHHSTTTCCCGGGCCEEEEEEECCB
T ss_pred HHHHHHHHHHHHhcCccCCchhceeEEeEEeeecc
Confidence 33 334444455433223344555556777764
No 50
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.53 E-value=6.8e-14 Score=123.15 Aligned_cols=127 Identities=14% Similarity=0.069 Sum_probs=89.3
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
+++||+|||||++|+.+|..|++.|.+|+|||+.....- ..+..+ +........+. .+. +
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~~~---~~~~~~~~~~~-~~~-------d-------- 61 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFLPP---KPPFPPGSLLE-RAY-------D-------- 61 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSSCC---CSCCCTTCHHH-HHC-------C--------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccCcc---ccccchhhHHh-hhc-------c--------
Confidence 468999999999999999999999999999999732110 001000 00000000000 000 0
Q ss_pred CccccCHHHHHHHHHHHHHhC-CcEEEEEEEEEEEEeCCeE-EEEEcCCcEEEcCEEEECCCCCCccccc
Q 014377 88 PYGRVNRKLLKSKMLQKCITN-GVKFHQAKVIKVIHEESKS-LLICNDGVTIQAAVVLDATGFSRCLVQY 155 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~-gv~~~~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vV~AdG~~s~~r~~ 155 (426)
..+. ++..+.+.|.+.+.+. |+++++++|++++.+++.+ .|.+.+|++++||+||.|+|.+|..+..
T Consensus 62 ~~g~-~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~ 130 (232)
T 2cul_A 62 PKDE-RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLF 130 (232)
T ss_dssp TTCC-CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEE
T ss_pred CCCC-CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhcee
Confidence 0011 6889999999999885 9998877999999887765 5778888889999999999999876543
No 51
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.53 E-value=8.4e-14 Score=134.90 Aligned_cols=143 Identities=22% Similarity=0.267 Sum_probs=90.4
Q ss_pred CCCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCC------cc-----cchhHHHhhcCchh-hhhh---
Q 014377 4 PSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPN------NY-----GVWVDEFEAMDLLD-CLDT--- 68 (426)
Q Consensus 4 ~~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~------~~-----g~~~~~l~~~~~~~-~~~~--- 68 (426)
++..+++||+|||||++|+++|+.|++.|.+|+|||+.+.++... .+ ..+...+..+.... ....
T Consensus 21 ~~~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (447)
T 2i0z_A 21 QSNAMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFS 100 (447)
T ss_dssp ----CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHH
T ss_pred CCccCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHH
Confidence 334456999999999999999999999999999999987542100 00 00111111111100 0000
Q ss_pred c--------c---CCeEEEecCCCccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe-EEEEEcCCc
Q 014377 69 T--------W---SGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK-SLLICNDGV 135 (426)
Q Consensus 69 ~--------~---~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~~g~ 135 (426)
. | .+..+..... .... +. .-....+.+.|.+.+.+.|++++ +++|+++..++++ +.|++.+|+
T Consensus 101 ~~~~~~~~~~~~~~G~~~~~~~~-g~~~--p~-~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~ 176 (447)
T 2i0z_A 101 IFNNEDIITFFENLGVKLKEEDH-GRMF--PV-SNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGE 176 (447)
T ss_dssp HSCHHHHHHHHHHTTCCEEECGG-GEEE--ET-TCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCC
T ss_pred hcCHHHHHHHHHhcCCceEEeeC-CEEE--CC-CCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCC
Confidence 0 0 0000100000 0000 00 01467888999999999999999 9999999987776 678888888
Q ss_pred EEEcCEEEECCCCCC
Q 014377 136 TIQAAVVLDATGFSR 150 (426)
Q Consensus 136 ~i~a~~vV~AdG~~s 150 (426)
+++||.||.|+|.+|
T Consensus 177 ~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 177 VLETNHVVIAVGGKS 191 (447)
T ss_dssp EEECSCEEECCCCSS
T ss_pred EEECCEEEECCCCCc
Confidence 899999999999999
No 52
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.52 E-value=6.8e-13 Score=129.54 Aligned_cols=42 Identities=29% Similarity=0.279 Sum_probs=37.4
Q ss_pred cEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 110 VKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 110 v~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
++++ +++|++|+.+++++.|++.+|++++||.||.|.+.+..
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~ 290 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAA 290 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHH
Confidence 5788 99999999988889999999989999999999987653
No 53
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.50 E-value=1.9e-12 Score=117.22 Aligned_cols=37 Identities=38% Similarity=0.535 Sum_probs=34.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
+++||+|||||||||++|+.|+++|++|+|||+.+.+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3589999999999999999999999999999998765
No 54
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.48 E-value=3.5e-13 Score=132.31 Aligned_cols=141 Identities=18% Similarity=0.250 Sum_probs=90.2
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCc---ccchhHHHhhcCchhhh------hhccCCeEEEec
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN---YGVWVDEFEAMDLLDCL------DTTWSGAVVHID 78 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~---~g~~~~~l~~~~~~~~~------~~~~~~~~~~~~ 78 (426)
..+||+||||||+|+++|+.|++.|++|+|||+.+.... +. .+.|... .+.....+ ...|....+...
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~-R~~~~~g~w~~~--~~~~~~~i~~g~gGag~~sdgkl~~~ 182 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE-RTKDTFGFWRKR--TLNPESNVQFGEGGAGTFSDGKLYSQ 182 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHH-HHHHHHHHHHHC--CCCTTSSSSSSTTGGGTTSCCCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccc-cccchhcccccc--cccccccceeccCCcccccCCceEEE
Confidence 358999999999999999999999999999999864310 00 0111100 00000000 000000000000
Q ss_pred ------------------CCCccc--cC-CCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEEcCCc
Q 014377 79 ------------------DNTKKD--LD-RPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLICNDGV 135 (426)
Q Consensus 79 ------------------~~~~~~--~~-~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~g~ 135 (426)
...... .. ...+......+.+.|.+.+.+.|++++ +++|++++.+++++ .|++.+|+
T Consensus 183 i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~ 262 (549)
T 3nlc_A 183 VKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGE 262 (549)
T ss_dssp SCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSC
T ss_pred eccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCC
Confidence 000000 00 111234567888899999998999999 99999999887654 48889999
Q ss_pred EEEcCEEEECCCCCCc
Q 014377 136 TIQAAVVLDATGFSRC 151 (426)
Q Consensus 136 ~i~a~~vV~AdG~~s~ 151 (426)
++.||+||.|+|.+|.
T Consensus 263 ~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 263 EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp EEECSCEEECCCTTCH
T ss_pred EEECCEEEECCCCChh
Confidence 9999999999999984
No 55
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.48 E-value=1.5e-13 Score=130.77 Aligned_cols=139 Identities=19% Similarity=0.177 Sum_probs=89.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC------Ccc-----cchhH------------HHhhcCch
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP------NNY-----GVWVD------------EFEAMDLL 63 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~------~~~-----g~~~~------------~l~~~~~~ 63 (426)
+.++||+|||||++|+++|+.|+++|.+|+|||+.+..+.. ..| +.... .+......
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 35799999999999999999999999999999998754110 001 00000 00011100
Q ss_pred hhhhhc-cCCeEEEecCCCccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEe----CCeEEEEEcCCcEE
Q 014377 64 DCLDTT-WSGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHE----ESKSLLICNDGVTI 137 (426)
Q Consensus 64 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~----~~~~~v~~~~g~~i 137 (426)
+.+... -.+..+...... ... +.. ++..+.+.|.+.+.+.|++++ +++|+++..+ ++++.|.+.++ ++
T Consensus 82 ~~~~~~~~~Gi~~~~~~~g-~~~--p~~--~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i 155 (401)
T 2gqf_A 82 DFISLVAEQGITYHEKELG-QLF--CDE--GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QW 155 (401)
T ss_dssp HHHHHHHHTTCCEEECSTT-EEE--ETT--CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EE
T ss_pred HHHHHHHhCCCceEECcCC-EEc--cCC--CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EE
Confidence 111000 001011111000 000 101 577888899999988999999 9999999876 56688888766 79
Q ss_pred EcCEEEECCCCCCc
Q 014377 138 QAAVVLDATGFSRC 151 (426)
Q Consensus 138 ~a~~vV~AdG~~s~ 151 (426)
+||.||.|+|.+|.
T Consensus 156 ~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 156 QCKNLIVATGGLSM 169 (401)
T ss_dssp EESEEEECCCCSSC
T ss_pred ECCEEEECCCCccC
Confidence 99999999999983
No 56
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.47 E-value=3.9e-12 Score=132.58 Aligned_cols=62 Identities=18% Similarity=0.304 Sum_probs=53.8
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
+.++...+...|.+.+.+.|++++ +++|++++.+++++ .|.+.+| +++||.||.|+|.+|..
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~ 209 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAK 209 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHH
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHH
Confidence 357899999999999999999999 99999999887775 4667666 89999999999999853
No 57
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.47 E-value=4e-13 Score=132.90 Aligned_cols=145 Identities=17% Similarity=0.198 Sum_probs=96.3
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC-CCCCCcc----cc-----hhHHHhhcCc-h-hhhhhccCCeEE
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK-LIWPNNY----GV-----WVDEFEAMDL-L-DCLDTTWSGAVV 75 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~-~~~~~~~----g~-----~~~~l~~~~~-~-~~~~~~~~~~~~ 75 (426)
..+||+|||||+||+++|+.|++.|.+|+|||+.+. .+. ..| |. +...+..++- . ...+. .+..+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~-~~Cnps~ggia~~~lv~ei~algg~~~~~~d~--~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ-MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQ--AGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC-CSSSSEEESTTHHHHHHHHHHTTCSHHHHHHH--HEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccc-ccccccccchhhHHHHHHHHHhccHHHHHhhh--cccch
Confidence 469999999999999999999999999999999742 211 111 11 1122333221 1 11110 01111
Q ss_pred E-ecCCCccccCCCccccCHHHHHHHHHHHHHh-CCcEEEEEEEEEEEEeCCeE-EEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 76 H-IDDNTKKDLDRPYGRVNRKLLKSKMLQKCIT-NGVKFHQAKVIKVIHEESKS-LLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 76 ~-~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~~~~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
. ...........+...+++..+.+.|.+.+.+ .|+++++++|+++..+++.+ .|.+.+|.++.||.||+|+|.+|..
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 1 1111111111122357999999999999988 79998888999998776665 6788888899999999999998866
Q ss_pred ccc
Q 014377 153 VQY 155 (426)
Q Consensus 153 r~~ 155 (426)
+..
T Consensus 184 ~~i 186 (651)
T 3ces_A 184 KIH 186 (651)
T ss_dssp EEE
T ss_pred ccc
Confidence 543
No 58
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.46 E-value=2.4e-13 Score=127.50 Aligned_cols=190 Identities=17% Similarity=0.116 Sum_probs=104.6
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCccccccCCCCCceeeEEEE
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGI 169 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r~~~~~~~~~~~~~~g~ 169 (426)
+.++...+.+.|.+.+++.|++++.++|++++..+ .++||.||.|+|.+|.-. . .. .......|.
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~-----------~~~a~~VV~A~G~~s~~l--~-~~-~~l~p~rg~ 201 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQRKVESFEEVA-----------REGADVIVNCTGVWAGAL--Q-RD-PLLQPGRGQ 201 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEECCCCCHHHHH-----------HTTCSEEEECCGGGGGGT--S-CC-TTCEEEEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEEEEeCCHHHhh-----------cCCCCEEEECCCcChHhh--c-CC-CceeecCCc
Confidence 45789999999999999999998765665554221 257999999999988531 1 11 223446666
Q ss_pred EEEeecCCCCCCceeeeecCCCcCCCchhhhccCCCCCcEEEEeeCCCCeEEEecccCcCC--CCCChHH---HHHHHHH
Q 014377 170 LAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVAR--PGVPMKD---IQERMVA 244 (426)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~v~~~~~~~~--~~~~~~~---~~~~~~~ 244 (426)
.+.++.+. ....++...... ...++.|+.|..+ .+.++.+..... ...+.+. +.+.+.+
T Consensus 202 ~~~~~~~~--~~~~~~~~~~~~-------------~~~~~~y~~p~~~-~~~iGg~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (351)
T 3g3e_A 202 IMKVDAPW--MKHFILTHDPER-------------GIYNSPYIIPGTQ-TVTLGGIFQLGNWSELNNIQDHNTIWEGCCR 265 (351)
T ss_dssp EEEEECTT--CCSEEEECCTTT-------------CTTCSCEEEECSS-CEEEECCCEETCCCCSCCHHHHHHHHHHHHH
T ss_pred EEEEeCCC--cceEEEeccccC-------------CCCceeEEEeCCC-cEEEeeeeecCCCCCCCCHHHHHHHHHHHHH
Confidence 66665321 233332210000 0024578889887 677776543221 2223332 3333333
Q ss_pred HHhhcCCccccccccceEeecCCCCCCCCCCceeEeeccC---CC--CCCCCcHHHHHHHHhcHHHHHHHHHhcCC
Q 014377 245 RLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTA---GM--VHPSTGYMVARTLAAAPIVANAIVRSLSS 315 (426)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~liGdAa---~~--~~P~~G~G~~~a~~~a~~la~~i~~~l~~ 315 (426)
+++.+ ...++...-.+..|+....+.. -.++|... +. ..-++|.|+..+...|..+|+.|...++.
T Consensus 266 ~~P~l--~~~~i~~~w~G~r~~t~D~p~~---~~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g~~la~li~~~~~~ 336 (351)
T 3g3e_A 266 LEPTL--KNARIIGERTGFRPVRPQIRLE---REQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEE 336 (351)
T ss_dssp HCGGG--GGCEEEEEEEEEEEECSSCEEE---EEEECCSSSCEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCc--cCCcEeeeeEeeCCCCCCccce---eeeccCCCCCCeEEEEeCCCcchHhhhHHHHHHHHHHHHHHHHh
Confidence 33332 1223444445666653221100 01233221 00 11256779999999999999998877653
No 59
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.44 E-value=8.9e-13 Score=129.94 Aligned_cols=143 Identities=21% Similarity=0.304 Sum_probs=95.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC-CCCCCcc----cc-----hhHHHhhcCc-h-hhhhhccCCeEE
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK-LIWPNNY----GV-----WVDEFEAMDL-L-DCLDTTWSGAVV 75 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~-~~~~~~~----g~-----~~~~l~~~~~-~-~~~~~~~~~~~~ 75 (426)
..+||+|||||+||+.+|+.|++.|.+|+|||+.+. .+. ..| |. +...+..++- . ...+. .+..+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~-~~Cnps~GGia~g~lv~eldalgg~~~~~~d~--~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ-MSCNPAIGGIAKGIVVREIDALGGEMGKAIDQ--TGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC-CCSCSEEECTTHHHHHHHHHHHTCSHHHHHHH--HEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC-cCccccccccchHHHHHHHHHhhhHHHHHhhh--cccce
Confidence 469999999999999999999999999999999742 211 111 11 1222333221 1 11110 01111
Q ss_pred Ee-cCCCccccCCCccccCHHHHHHHHHHHHHh-CCcEEEEEEEEEEEEeCCeE-EEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 76 HI-DDNTKKDLDRPYGRVNRKLLKSKMLQKCIT-NGVKFHQAKVIKVIHEESKS-LLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 76 ~~-~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~~~~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
.. ..........+...+++..+.+.|.+.+.+ .|+++++++|+++..+++.+ .|.+.+|.++.||.||.|+|.++..
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 11 111111111122357899999999999988 69998877999998877765 5888889999999999999998765
Q ss_pred c
Q 014377 153 V 153 (426)
Q Consensus 153 r 153 (426)
+
T Consensus 183 ~ 183 (637)
T 2zxi_A 183 V 183 (637)
T ss_dssp E
T ss_pred c
Confidence 4
No 60
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.44 E-value=8.3e-13 Score=130.60 Aligned_cols=143 Identities=21% Similarity=0.255 Sum_probs=94.0
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC-CCCCCcc----cc-----hhHHHhhcC-chh-hhhhccCCeE
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK-LIWPNNY----GV-----WVDEFEAMD-LLD-CLDTTWSGAV 74 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~-~~~~~~~----g~-----~~~~l~~~~-~~~-~~~~~~~~~~ 74 (426)
...+||+|||||+||+.+|+.|++.|.+|+|+|+.+. .+. ..| +. ....+..++ +.. ..+. .+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~-~~c~ps~gGia~~~lv~el~al~g~~~~~~d~--~gi~ 95 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR-MSCNPAIGGVAKGQITREIDALGGEMGKAIDA--TGIQ 95 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC-CSSCSEEECHHHHHHHHHHHHHTCSHHHHHHH--HEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC-CccccchhhhhHHHHHHHHHhcccHHHHHHHh--cCCc
Confidence 4469999999999999999999999999999999742 111 111 11 111122221 111 0110 0111
Q ss_pred EEe-cCCCccccCCCccccCHHHHHHHHHHHHHh-CCcEEEEEEEEEEEEeCCeEE-EEEcCCcEEEcCEEEECCCCCCc
Q 014377 75 VHI-DDNTKKDLDRPYGRVNRKLLKSKMLQKCIT-NGVKFHQAKVIKVIHEESKSL-LICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 75 ~~~-~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~~~~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
+.. ..........+...+++..+...|.+.+.+ .|+++++++|+++..+++.+. |.+.+|.++.||.||+|+|.++.
T Consensus 96 f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 96 FRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 111 111111111122357999999999999987 599988779999988877775 88888999999999999998865
Q ss_pred c
Q 014377 152 L 152 (426)
Q Consensus 152 ~ 152 (426)
.
T Consensus 176 ~ 176 (641)
T 3cp8_A 176 G 176 (641)
T ss_dssp C
T ss_pred c
Confidence 3
No 61
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.44 E-value=6.3e-13 Score=124.76 Aligned_cols=129 Identities=20% Similarity=0.209 Sum_probs=92.4
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchh-hhhhccCCeEEEecCCCccccC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLD-CLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.++||+|||||++|+++|..|++.|++|+|||+.+.++ |.|......+.+.. .....+++ .. ...
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g-----g~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~ 67 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG-----GAWQHAWHSLHLFSPAGWSSIPG-------WP--MPA 67 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS-----GGGGGSCTTCBCSSCGGGSCCSS-------SC--CCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC-----CcccCCCCCcEecCchhhhhCCC-------CC--CCC
Confidence 45899999999999999999999999999999987542 33322111111100 00000111 00 001
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEE-EEEcCCcEEEcCEEEECCCCCCc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSL-LICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.......+..+.+.|.+.+.+.|++++ +++|++++.+++.+. |++.++ ++.+|.||.|+|.+|.
T Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 68 SQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp CSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 112235788999999999998999998 899999999988888 888877 8999999999998764
No 62
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.43 E-value=8.6e-13 Score=111.30 Aligned_cols=111 Identities=23% Similarity=0.229 Sum_probs=86.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
+||+|||||++|+.+|..|++.|.+|+|+|+.+... .+.. + +. .+++ .+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~-~~~~--~--------~~-----~~~~--------------~~~ 51 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV-KGVS--R--------VP-----NYPG--------------LLD 51 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT-TTCS--C--------CC-----CSTT--------------CTT
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc-cCch--h--------hh-----ccCC--------------CcC
Confidence 799999999999999999999999999999986321 1100 0 00 0010 011
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCccc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLV 153 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r 153 (426)
.+....+.+.+.+.+.+.|++++ + +|++++.+++++.+++.+| ++.+|+||.|+|.++.++
T Consensus 52 -~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~ 113 (180)
T 2ywl_A 52 -EPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLP 113 (180)
T ss_dssp -CCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHH
T ss_pred -CCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCcc
Confidence 24577888999999999999999 7 9999998777788888888 899999999999987543
No 63
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.43 E-value=6.5e-13 Score=123.72 Aligned_cols=122 Identities=20% Similarity=0.237 Sum_probs=90.7
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
|+.++||+||||||+|+++|..|++.|++|+|||+.+..+ |.|... ++...++ ..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g-----g~~~~~-------------~~~~~~~--~~----- 56 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG-----GQLTAL-------------YPEKYIY--DV----- 56 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC-----HHHHHT-------------CTTSEEC--CS-----
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-----Ceeecc-------------CCCceee--cc-----
Confidence 3457999999999999999999999999999999986432 222111 1111110 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCccc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLV 153 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r 153 (426)
..+..+++..+.+.|.+.+.+.+++++ +++|++++.+++.+.|.+.+|.++.+|.||.|+|.+|...
T Consensus 57 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p 124 (335)
T 2zbw_A 57 -AGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEP 124 (335)
T ss_dssp -TTCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEE
T ss_pred -CCCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCC
Confidence 011235677888888888888889988 8899999988778888888888999999999999976433
No 64
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.42 E-value=9.6e-13 Score=123.88 Aligned_cols=123 Identities=20% Similarity=0.224 Sum_probs=90.8
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
|+..+||+||||||+|+++|+.|++.|++|+|||+.+..+ |.|... .+...++ ..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g-----g~~~~~-------------~~~~~~~--~~----- 65 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG-----GQLAAL-------------YPEKHIY--DV----- 65 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC-----HHHHHT-------------CTTSEEC--CS-----
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC-----Cccccc-------------CCCcccc--cC-----
Confidence 3456899999999999999999999999999999986432 222110 1111110 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCC-eEEEEEcCCcEEEcCEEEECCCCCCcccc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEES-KSLLICNDGVTIQAAVVLDATGFSRCLVQ 154 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~i~a~~vV~AdG~~s~~r~ 154 (426)
..+..+++..+.+.|.+.+.+.|++++ +++|++++.+++ .+.|.+.+|+++.+|.||.|+|.+|...+
T Consensus 66 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~ 135 (360)
T 3ab1_A 66 -AGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPR 135 (360)
T ss_dssp -TTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBC
T ss_pred -CCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCC
Confidence 011235678888889988888899988 889999988755 68888988989999999999999775443
No 65
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.40 E-value=3.9e-12 Score=118.83 Aligned_cols=131 Identities=12% Similarity=0.113 Sum_probs=77.9
Q ss_pred CcEEEECchHHHHHHHHHHHH---CCCcEEEEcCCCCCCCCCc-------------ccc-h----hH---HHhhcCchhh
Q 014377 10 VDLAVVGGGPAGLAVAQQVSE---AGLSVCSIDPSPKLIWPNN-------------YGV-W----VD---EFEAMDLLDC 65 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~~-------------~g~-~----~~---~l~~~~~~~~ 65 (426)
+||+|||||++|+++|+.|++ .|++|+|||+.+..+..-. .|. + .. .+..+ +...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~-~~~~ 80 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRF-YDEL 80 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHH-HHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHH-HHHH
Confidence 599999999999999999999 9999999999864321000 000 0 00 00000 0000
Q ss_pred ----hhhccCCeEEEecCCCccccCCCccccC---HHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEE
Q 014377 66 ----LDTTWSGAVVHIDDNTKKDLDRPYGRVN---RKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTI 137 (426)
Q Consensus 66 ----~~~~~~~~~~~~~~~~~~~~~~~~~~v~---r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i 137 (426)
+...|....... ........... ...+.+.|.+.+ |++++ +++|++++.+++++.|++.+|+++
T Consensus 81 ~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~ 152 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGM-----VMKEGDCNFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRDDKWEVSKQTGSPE 152 (342)
T ss_dssp HHTTSCEECCSCEETC-----CC--CCEEEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECSSSEEEEESSSCCE
T ss_pred HhCCCeecCchhhcce-----eccCCccceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEEEEEECCCCEE
Confidence 001121111000 00000001111 123444444433 78999 999999999888899999999889
Q ss_pred EcCEEEECCCCC
Q 014377 138 QAAVVLDATGFS 149 (426)
Q Consensus 138 ~a~~vV~AdG~~ 149 (426)
.+|.||.|....
T Consensus 153 ~ad~vV~A~p~~ 164 (342)
T 3qj4_A 153 QFDLIVLTMPVP 164 (342)
T ss_dssp EESEEEECSCHH
T ss_pred EcCEEEECCCHH
Confidence 999999999753
No 66
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.40 E-value=4.4e-12 Score=115.09 Aligned_cols=128 Identities=20% Similarity=0.232 Sum_probs=86.9
Q ss_pred CcCcEEEECchHHHHHHHHHHHHC-CCcEEEEcCCCCCCCCC-cccch----------hHHHhhcCchhhhhhccCCeEE
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEA-GLSVCSIDPSPKLIWPN-NYGVW----------VDEFEAMDLLDCLDTTWSGAVV 75 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~-G~~V~liE~~~~~~~~~-~~g~~----------~~~l~~~~~~~~~~~~~~~~~~ 75 (426)
.++||+|||||++|+++|+.|++. |.+|+|||+.+.+.... .++.. ...+..+++. +
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~-----------~ 106 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVA-----------Y 106 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCC-----------C
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCC-----------c
Confidence 468999999999999999999997 99999999987542110 01100 0011111110 0
Q ss_pred EecCCCccccCCCcc-ccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCeE-EEEEc---------CC-----cEE
Q 014377 76 HIDDNTKKDLDRPYG-RVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESKS-LLICN---------DG-----VTI 137 (426)
Q Consensus 76 ~~~~~~~~~~~~~~~-~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~-~v~~~---------~g-----~~i 137 (426)
.. ...+. ..++..+...|.+++.+ .|++++ +++|+++..+++.+ .|.+. ++ .++
T Consensus 107 ~~--------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i 178 (284)
T 1rp0_A 107 DE--------QDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVM 178 (284)
T ss_dssp EE--------CSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEE
T ss_pred cc--------CCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEE
Confidence 00 00111 12677888888888876 799999 89999999887754 33332 22 579
Q ss_pred EcCEEEECCCCCCcccc
Q 014377 138 QAAVVLDATGFSRCLVQ 154 (426)
Q Consensus 138 ~a~~vV~AdG~~s~~r~ 154 (426)
+||.||+|+|.+|.++.
T Consensus 179 ~ad~VV~AtG~~s~~~~ 195 (284)
T 1rp0_A 179 EAKIVVSSCGHDGPFGA 195 (284)
T ss_dssp EEEEEEECCCSSSTTTT
T ss_pred ECCEEEECCCCchHHHH
Confidence 99999999999987754
No 67
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.39 E-value=3.2e-11 Score=117.82 Aligned_cols=40 Identities=15% Similarity=0.217 Sum_probs=36.0
Q ss_pred cEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 110 VKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 110 v~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
++++ +++|++|+.+++++.|++.+| ++.||.||.|.+.+.
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQ 289 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHH
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHH
Confidence 6888 999999999988999999888 899999999998764
No 68
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.39 E-value=1.2e-12 Score=126.85 Aligned_cols=139 Identities=12% Similarity=0.123 Sum_probs=89.9
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCCCCCCCCcccchhHH---HhhcCchh--------hh------
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSPKLIWPNNYGVWVDE---FEAMDLLD--------CL------ 66 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~~~~~~~~~g~~~~~---l~~~~~~~--------~~------ 66 (426)
+++.+||+||||||+|+++|..|++.|. +|+|||+.+..+ |.|... -..+.+.. .+
T Consensus 3 ~~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~G-----G~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~ 77 (447)
T 2gv8_A 3 LPTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPG-----GVWNYTSTLSNKLPVPSTNPILTTEPIVGPAAL 77 (447)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSS-----TTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSC
T ss_pred CCCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCC-----CeecCCCCCCccccccccccccccccccccccc
Confidence 4467899999999999999999999999 999999986542 111100 00000000 00
Q ss_pred ----hhccCCeE-------EEecCCCccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcC-
Q 014377 67 ----DTTWSGAV-------VHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICND- 133 (426)
Q Consensus 67 ----~~~~~~~~-------~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~- 133 (426)
...+.... ..+.+.. ........+++..+.+.|.+.+.+.+..++ +++|++++.+++.+.|++.+
T Consensus 78 ~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~ 155 (447)
T 2gv8_A 78 PVYPSPLYRDLQTNTPIELMGYCDQS--FKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGT 155 (447)
T ss_dssp CBCCCCCCTTCBCSSCHHHHSCTTCC--CCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEES
T ss_pred CCccCchhhhhccCCCHHHhccCCCC--CCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeec
Confidence 00000000 0000000 000011235788999999988877677777 99999999888888888765
Q ss_pred --Cc---EEEcCEEEECCCCCCc
Q 014377 134 --GV---TIQAAVVLDATGFSRC 151 (426)
Q Consensus 134 --g~---~i~a~~vV~AdG~~s~ 151 (426)
|+ ++.+|.||.|+|.+|.
T Consensus 156 ~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 156 KAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp STTCCEEEEEESEEEECCCSSSS
T ss_pred CCCCeeEEEEeCEEEECCCCCCC
Confidence 66 7999999999999774
No 69
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.37 E-value=3.1e-11 Score=116.03 Aligned_cols=55 Identities=18% Similarity=0.221 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 95 KLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 95 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
..+.+.|.+.+.+.|++++ +++|++++.+++++ | +.+|++++||.||.|.|.+..
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHH
Confidence 3566777888888899999 99999999888888 5 567889999999999998754
No 70
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.36 E-value=4.8e-12 Score=115.99 Aligned_cols=129 Identities=20% Similarity=0.249 Sum_probs=85.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcc-cch----------hHHHhhcCchhhhhhccCCeE
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNY-GVW----------VDEFEAMDLLDCLDTTWSGAV 74 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~-g~~----------~~~l~~~~~~~~~~~~~~~~~ 74 (426)
.++||+||||||+|+++|+.|++. |++|+|||+.+.++..... +.. ...++.+++ +.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv--------~~-- 147 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGV--------PY-- 147 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTC--------CC--
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCC--------cc--
Confidence 468999999999999999999997 9999999998754311000 000 001111111 00
Q ss_pred EEecCCCccccCCCccc-cCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCC-------------------eE-EEEE
Q 014377 75 VHIDDNTKKDLDRPYGR-VNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEES-------------------KS-LLIC 131 (426)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~-------------------~~-~v~~ 131 (426)
.. . ..|.. .+...+.+.|.+++.+ .|++++ +++|+++..+++ .+ .|.+
T Consensus 148 -~~-~-------G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~ 218 (344)
T 3jsk_A 148 -ED-E-------GDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVT 218 (344)
T ss_dssp -EE-C-------SSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEE
T ss_pred -cc-c-------CCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEe
Confidence 00 0 01211 2467788999999988 699999 899999987652 22 1222
Q ss_pred ------c--------CCcEEEcCEEEECCCCCCccccc
Q 014377 132 ------N--------DGVTIQAAVVLDATGFSRCLVQY 155 (426)
Q Consensus 132 ------~--------~g~~i~a~~vV~AdG~~s~~r~~ 155 (426)
. +..+++|++||+|||..|.+++.
T Consensus 219 ~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~ 256 (344)
T 3jsk_A 219 NWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAF 256 (344)
T ss_dssp EEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCH
T ss_pred eeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHH
Confidence 1 23579999999999999987653
No 71
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.36 E-value=1.5e-10 Score=111.33 Aligned_cols=57 Identities=25% Similarity=0.305 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEE-EEEcCCcEEEcCEEEECCCCCCcc
Q 014377 95 KLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSL-LICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 95 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
..+.+.|.+.+.+.|++++ +++|++++.++++++ |++ +|++++||.||.|.|.+...
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~ 254 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATA 254 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHH
Confidence 4467778888888999999 999999999888876 555 58889999999999987653
No 72
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.36 E-value=5.1e-12 Score=115.35 Aligned_cols=112 Identities=14% Similarity=0.168 Sum_probs=86.7
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
++||+||||||+|+++|..|++.|++|+|||+.+... .+.. . ...++ .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~------~~~~---------~-~~~~~----------------~ 49 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRN------RFAS---------H-SHGFL----------------G 49 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGG------GGCS---------C-CCSST----------------T
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccc------ccch---------h-hcCCc----------------C
Confidence 3899999999999999999999999999999975211 0000 0 00000 1
Q ss_pred ccccCHHHHHHHHHHHHHhC-CcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 89 YGRVNRKLLKSKMLQKCITN-GVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~-gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
...++...+...+.+.+.+. +++++.++|++++.+++.+.|.+.+++++.+|.||.|+|..+..
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 50 QDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDEL 114 (297)
T ss_dssp CTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEEC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCC
Confidence 12356788888888888875 78887779999999888899999999999999999999997654
No 73
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.36 E-value=3.9e-12 Score=125.60 Aligned_cols=128 Identities=16% Similarity=0.268 Sum_probs=91.8
Q ss_pred CCcCcEEEECchHHHHHHHHHHH-HCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCC-----
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVS-EAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDN----- 80 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La-~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----- 80 (426)
+..+||+|||||++|+++|..|+ +.|++|+|||+++..+ |.|... .+++.....+..
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~G-----Gtw~~~------------~ypg~~~d~~s~~~~~~ 68 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPG-----GTWYWN------------RYPGALSDTESHLYRFS 68 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSC-----THHHHC------------CCTTCEEEEEGGGSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCC-----Cccccc------------CCCCceecCCcceeeec
Confidence 35689999999999999999999 8999999999986543 333210 011111111000
Q ss_pred -Cc---cccCCCccccCHHHHHHHHHHHHHhCCc--EEE-EEEEEEEEEeCC--eEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 81 -TK---KDLDRPYGRVNRKLLKSKMLQKCITNGV--KFH-QAKVIKVIHEES--KSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 81 -~~---~~~~~~~~~v~r~~l~~~L~~~~~~~gv--~~~-~~~v~~i~~~~~--~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.. ..........++..+.+.+.+.+.+.|+ +++ +++|++++.+++ .+.|++.+|++++||.||.|+|..|.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 69 FDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSA 148 (540)
T ss_dssp SCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCS
T ss_pred cccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccccc
Confidence 00 0001112246788999999999888887 677 899999988765 78999999999999999999998764
No 74
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.35 E-value=4.6e-12 Score=117.08 Aligned_cols=118 Identities=17% Similarity=0.182 Sum_probs=84.7
Q ss_pred CCCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcc
Q 014377 4 PSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKK 83 (426)
Q Consensus 4 ~~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
.+|+..+||+||||||+|+++|+.|++.|++|+|||+... . |.+... ..+ ..++
T Consensus 11 ~~m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~---g---g~~~~~---~~~-----~~~~------------ 64 (319)
T 3cty_A 11 EEKERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVA---G---GLTAEA---PLV-----ENYL------------ 64 (319)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSST---T---GGGGGC---SCB-----CCBT------------
T ss_pred ccccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC---C---cccccc---chh-----hhcC------------
Confidence 3455679999999999999999999999999999999531 1 111000 000 0001
Q ss_pred ccCCCccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 84 DLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 84 ~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
.+..+++..+.+.+.+.+.+.|++++.++|++++.+++.+.|.+ ++.++.+|.||.|+|.++..
T Consensus 65 ----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 65 ----GFKSIVGSELAKLFADHAANYAKIREGVEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp ----TBSSBCHHHHHHHHHHHHHTTSEEEETCCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred ----CCcccCHHHHHHHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 01135677788888888888899987668889988877777776 66789999999999986644
No 75
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.35 E-value=7.1e-12 Score=115.84 Aligned_cols=115 Identities=18% Similarity=0.145 Sum_probs=86.4
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+.+||+|||||++|+++|+.|++.|++|+|||+. .+ |.|.. .. ... ..
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~g-----g~~~~---------------~~-~~~--~~------ 61 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PG-----GQLTE---------------AG-IVD--DY------ 61 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TT-----GGGGG---------------CC-EEC--CS------
T ss_pred CCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CC-----Ceecc---------------cc-ccc--cc------
Confidence 34689999999999999999999999999999997 11 22211 00 000 00
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
..+..+....+.+.+.+.+.+.|++++.++|+++..+++.+.+.+.++.++.+|.||.|+|..+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~ 127 (323)
T 3f8d_A 62 LGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRK 127 (323)
T ss_dssp TTSTTEEHHHHHHHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECC
T ss_pred CCCCCCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCcc
Confidence 011125678888889998888899887788999988887888999998899999999999987543
No 76
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.34 E-value=8.2e-12 Score=114.92 Aligned_cols=115 Identities=23% Similarity=0.364 Sum_probs=87.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
+||+||||||+|+++|..|++.|+ +|+|||+.... |.+... ..+ ..++ ..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~g------g~~~~~---~~~-----~~~~--------------~~~ 53 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPG------GQITGS---SEI-----ENYP--------------GVK 53 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTT------CGGGGC---SCB-----CCST--------------TCC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCC------cccccc---ccc-----ccCC--------------CCc
Confidence 799999999999999999999999 99999996311 111100 000 0001 001
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCccc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLV 153 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r 153 (426)
..+++..+.+.+.+.+.+.|++++.++|++++.+++.+.|.+.+|+++++|.||.|+|.++...
T Consensus 54 -~~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 54 -EVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp -SCBCHHHHHHHHHHHHHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred -ccCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 1367888999999888888999876689999888888888888888999999999999876543
No 77
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.32 E-value=3.6e-12 Score=118.38 Aligned_cols=116 Identities=20% Similarity=0.242 Sum_probs=88.3
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
..+||+|||||++|+++|..|++.|++|+|||+.+..+ |.|.. .++...+. . ..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g-----G~~~~-------------~~~~~~~~--~------~~ 59 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG-----GQLSA-------------LYPEKYIY--D------VA 59 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC-----HHHHH-------------HCTTSEEC--C------ST
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC-----ceehh-------------cCCCceEe--c------cC
Confidence 45899999999999999999999999999999987532 23311 11111110 0 00
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCC-eEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEES-KSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
.+..+.+..+...+.+.+.+.|++++ +++|+++..+++ .+.|.+.+|+ +.+|.||.|+|.++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 60 GFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGA 123 (332)
T ss_dssp TCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSC
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCc
Confidence 11235678889999999888899999 899999998766 7888888876 99999999999954
No 78
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.31 E-value=1.1e-11 Score=114.75 Aligned_cols=118 Identities=23% Similarity=0.247 Sum_probs=86.2
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
++..+||+||||||+|+++|..|++.|++|+|||+.. .+ |.+... ..+ ..++
T Consensus 5 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g-----g~~~~~---~~~-----~~~~-------------- 56 (325)
T 2q7v_A 5 TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PG-----GQIAWS---EEV-----ENFP-------------- 56 (325)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TT-----GGGGGC---SCB-----CCST--------------
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CC-----cccccc---ccc-----ccCC--------------
Confidence 3457899999999999999999999999999999973 11 111100 000 0000
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEe--CCe-EEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHE--ESK-SLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~--~~~-~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
..+. .+++..+.+.+.+.+.+.|++++.++|++++.+ ++. +.|.+.+|+++.+|.||.|+|.++..
T Consensus 57 ~~~~-~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 57 GFPE-PIAGMELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp TCSS-CBCHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred CCCC-CCCHHHHHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 0011 256778888899888889999886688888876 443 67777888899999999999986543
No 79
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.31 E-value=8.8e-12 Score=124.30 Aligned_cols=144 Identities=19% Similarity=0.207 Sum_probs=90.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCc-c--cchh---HHHhhcCchh----------------
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN-Y--GVWV---DEFEAMDLLD---------------- 64 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~-~--g~~~---~~l~~~~~~~---------------- 64 (426)
..++||+|||||++|+++|+.|++.|.+|+|||+.+..+.... . +.+. ...+.+++.+
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 4578999999999999999999999999999999876531110 0 0100 0011111110
Q ss_pred ----hh---------------hhccCCeEEEecCCCccccCC---C-ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEE
Q 014377 65 ----CL---------------DTTWSGAVVHIDDNTKKDLDR---P-YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKV 120 (426)
Q Consensus 65 ----~~---------------~~~~~~~~~~~~~~~~~~~~~---~-~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i 120 (426)
.+ ....+-..+.... ...... + -+.++...+.+.|.+.+.+.|++++ +++|+++
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~--g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l 276 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDLKRSG--GARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKL 276 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCT--TCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccccccC--CCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEE
Confidence 00 0000000000000 000000 0 0124578899999999999999999 9999999
Q ss_pred EEeC-CeEE-EEE--cCCc--EEEcCEEEECCCCCCcc
Q 014377 121 IHEE-SKSL-LIC--NDGV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 121 ~~~~-~~~~-v~~--~~g~--~i~a~~vV~AdG~~s~~ 152 (426)
..++ +.+. |++ .+|+ +++||.||.|+|.+|..
T Consensus 277 ~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 277 VVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp EECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred EECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 9877 6542 443 3675 68999999999999975
No 80
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.31 E-value=1.6e-11 Score=121.72 Aligned_cols=137 Identities=18% Similarity=0.169 Sum_probs=88.8
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHH-HhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDE-FEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
+..+||+|||||++|+++|..|++.|++|+|||+.+..+ |.|... ......+ .....+. ..+........
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G-----G~w~~~~~pg~~~d-~~~~~~~---~~f~~~~~~~~ 84 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG-----GVWYWNRYPGARCD-IESIEYC---YSFSEEVLQEW 84 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC-----THHHHCCCTTCBCS-SCTTTSS---CCSCHHHHHHC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC-----CcccccCCCceeec-ccccccc---cccChhhhhcc
Confidence 346899999999999999999999999999999987543 233110 0000000 0000000 00000000000
Q ss_pred CCCccccCHHHHHHHHHHHHHhCC--cEEE-EEEEEEEEEeCC--eEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNG--VKFH-QAKVIKVIHEES--KSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~g--v~~~-~~~v~~i~~~~~--~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
.......++..+.+.|...+.+.+ .+++ +++|++++.+++ .+.|++.+|++++||+||.|+|.+|.-
T Consensus 85 ~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p 156 (542)
T 1w4x_A 85 NWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVP 156 (542)
T ss_dssp CCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCC
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 111123578888888888777655 5677 899999987653 688999999899999999999987643
No 81
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.30 E-value=9.1e-12 Score=123.22 Aligned_cols=135 Identities=16% Similarity=0.248 Sum_probs=89.8
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHH-HhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDE-FEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
...+||+|||||++|+++|..|++.|++|+|||+++..+ |.|... ...+.. +.-.+.+. ..+........
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G-----Gtw~~~~ypg~~~-dv~s~~y~---~~f~~~~~~~~ 89 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVG-----GVWYWNRYPGARC-DVESIDYS---YSFSPELEQEW 89 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC-----THHHHCCCTTCBC-SSCTTTSS---CCSCHHHHHHC
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCC-----CccccCCCCCcee-CCCchhcc---cccccccccCC
Confidence 346899999999999999999999999999999987542 233210 000000 00000000 00000000000
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCc--EEE-EEEEEEEEEeCC--eEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGV--KFH-QAKVIKVIHEES--KSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv--~~~-~~~v~~i~~~~~--~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
.......++..+.+.+.+.+.+.|+ +++ +++|++++.+++ .+.|++.+|++++||+||.|+|..|
T Consensus 90 ~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 90 NWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLS 159 (549)
T ss_dssp CCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEE
T ss_pred CCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 1111245788899999998888887 677 899999988765 7899999999999999999999755
No 82
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.30 E-value=7.4e-12 Score=123.77 Aligned_cols=137 Identities=15% Similarity=0.209 Sum_probs=90.1
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHH-HhhcCchhhhhhccCCeEEEecCCCccc
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDE-FEAMDLLDCLDTTWSGAVVHIDDNTKKD 84 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
.+..+||+|||||++|+++|..|++.|++|+|||+++..+ |.|... ...... +...+.+. ..+.......
T Consensus 6 ~~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~G-----Gtw~~~~yPg~~~-d~~~~~y~---~~f~~~~~~~ 76 (545)
T 3uox_A 6 KSPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVG-----GTWYWNRYPGCRL-DTESYAYG---YFALKGIIPE 76 (545)
T ss_dssp CCCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC-----THHHHCCCTTCBC-SSCHHHHC---HHHHTTSSTT
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC-----CccccCCCCceee-cCchhhcc---cccCcccccC
Confidence 3557899999999999999999999999999999987542 333110 000000 00000000 0000000000
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCCc--EEE-EEEEEEEEEeC--CeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 85 LDRPYGRVNRKLLKSKMLQKCITNGV--KFH-QAKVIKVIHEE--SKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 85 ~~~~~~~v~r~~l~~~L~~~~~~~gv--~~~-~~~v~~i~~~~--~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
........++..+.+.+.+.+.+.|+ .+. +++|++++.++ +.+.|++.+|++++||+||.|+|..|.
T Consensus 77 ~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 77 WEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSA 148 (545)
T ss_dssp CCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC
T ss_pred CCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 11112235788888888888887776 566 88999998764 478999999999999999999997653
No 83
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.29 E-value=1.9e-11 Score=112.11 Aligned_cols=114 Identities=20% Similarity=0.246 Sum_probs=77.6
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
.|..|||+||||||||+++|+.|++.|++|+|||+.... |.+. ..+++ +.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~g------g~~~-------------~~~~~----~~------- 52 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNR------NRVT-------------QNSHG----FI------- 52 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCG------GGGS-------------SCBCC----ST-------
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC------Ceee-------------eecCC----cc-------
Confidence 356799999999999999999999999999999986421 1110 00110 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhC-CcEEEEEEEEEEEEe-CCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITN-GVKFHQAKVIKVIHE-ESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~-gv~~~~~~v~~i~~~-~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.+..+....+.+...+++.+. ++.+....+..+... ++.+.+.+.+|+++++|.||.|+|....
T Consensus 53 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 53 --TRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE 118 (304)
T ss_dssp --TCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE
T ss_pred --CCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc
Confidence 011245556666666666664 455556666666654 4457888999999999999999998643
No 84
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.29 E-value=3.8e-11 Score=119.87 Aligned_cols=143 Identities=19% Similarity=0.222 Sum_probs=88.5
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCc--cc-ch---hHHHhhcCchhhhh--------------
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN--YG-VW---VDEFEAMDLLDCLD-------------- 67 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~--~g-~~---~~~l~~~~~~~~~~-------------- 67 (426)
.++||+|||||++|+++|+.|++.|.+|+|||+.+..+.... .| .+ ....+.+++.+...
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999999999999876431110 01 10 00111122110000
Q ss_pred ---------------------hccCCeEEEecCCCccccCCCc----cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEE
Q 014377 68 ---------------------TTWSGAVVHIDDNTKKDLDRPY----GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVI 121 (426)
Q Consensus 68 ---------------------~~~~~~~~~~~~~~~~~~~~~~----~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~ 121 (426)
...+-..+.... .......+ +......+.+.|.+.+.+.|++++ +++|+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~ 282 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDVGMMG--GASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVL 282 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCT--TCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccCcccC--CcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeE
Confidence 000000000000 00000000 113467889999999999999999 99999999
Q ss_pred EeC-CeEE-EEEc--CCc--EEEcCEEEECCCCCCcc
Q 014377 122 HEE-SKSL-LICN--DGV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 122 ~~~-~~~~-v~~~--~g~--~i~a~~vV~AdG~~s~~ 152 (426)
.++ +.+. |++. +|+ ++.||.||.|+|.+|..
T Consensus 283 ~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n 319 (571)
T 1y0p_A 283 KDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKN 319 (571)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred EcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccC
Confidence 876 5432 4333 665 78999999999998863
No 85
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.28 E-value=1.1e-11 Score=112.90 Aligned_cols=135 Identities=24% Similarity=0.275 Sum_probs=83.2
Q ss_pred CcCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHHhhcCch----hhhhhccCCeEEEecCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLL----DCLDTTWSGAVVHIDDNT 81 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~ 81 (426)
..+||+||||||+|+++|+.|++. |++|+|+|+.+..+....++.. .+....+. ..+. .+ +..+...
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~--~~~~~~~~~~~~~~L~-~~-Gv~~~~~--- 136 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ--LFSAMVMRKPAHLFLQ-EL-EIPYEDE--- 136 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGG--GCCCEEEETTTHHHHH-HT-TCCCEEC---
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCc--ccchhhhhhHHHHHHH-hh-CcccccC---
Confidence 356999999999999999999998 9999999998765321111110 00000000 0000 00 0000000
Q ss_pred ccccCCCcc-ccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeC----C--eE-EEEEc--------------CCcEE
Q 014377 82 KKDLDRPYG-RVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEE----S--KS-LLICN--------------DGVTI 137 (426)
Q Consensus 82 ~~~~~~~~~-~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~----~--~~-~v~~~--------------~g~~i 137 (426)
..+. ..+...+...|.+++.+ .|++++ +++|+++..++ + .+ .|.+. ++.++
T Consensus 137 -----g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I 211 (326)
T 2gjc_A 137 -----GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVI 211 (326)
T ss_dssp -----SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEE
T ss_pred -----CCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEE
Confidence 1111 12567888899998888 699999 99999998763 2 32 23221 34679
Q ss_pred Ec---------------CEEEECCCCCCcccc
Q 014377 138 QA---------------AVVLDATGFSRCLVQ 154 (426)
Q Consensus 138 ~a---------------~~vV~AdG~~s~~r~ 154 (426)
.| ++||+|+|..+.+..
T Consensus 212 ~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~ 243 (326)
T 2gjc_A 212 ELAGYKNDGTRDLSQKHGVILSTTGHDGPFGA 243 (326)
T ss_dssp EESCCCSSSCCCSSTTCCEEEECCCCC--CCS
T ss_pred EEeeccccccccccccCCEEEECcCCCchHHH
Confidence 99 999999999887654
No 86
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.28 E-value=1.3e-11 Score=113.62 Aligned_cols=121 Identities=16% Similarity=0.154 Sum_probs=84.8
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
|.+.|||+||||||||+++|..|++.|++|+|||+.+..+... .|.... ...+. +. .
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~-~G~~~~----------------~~~i~--~~----~ 57 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAA-GGQLTT----------------TTIIE--NF----P 57 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCT-TCGGGG----------------SSEEC--CS----T
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCccc-CCCcCC----------------hHHhh--hc----c
Confidence 3456999999999999999999999999999999875321111 111100 00000 00 0
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
..+. .++...+...+.+.+.+.++++...++.....+.+...+.+.++.++.+|.||.|+|..+
T Consensus 58 g~~~-~i~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 58 GFPN-GIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp TCTT-CEEHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEE
T ss_pred CCcc-cCCHHHHHHHHHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccc
Confidence 0111 255677888888888888988876667777766667778888899999999999999754
No 87
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.27 E-value=4.7e-11 Score=116.75 Aligned_cols=55 Identities=15% Similarity=0.088 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe-EEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 96 LLKSKMLQKCITNGVKFH-QAKVIKVIHEESK-SLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 96 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.+.+.|.+.+.+.|++++ +++|++|+.++++ +.|++ ++.++.||.||.|.+.+..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 366777777877899999 9999999987766 77766 5568999999999987543
No 88
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.27 E-value=1.3e-11 Score=114.81 Aligned_cols=122 Identities=17% Similarity=0.130 Sum_probs=87.2
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
+.+.+||+||||||+|+++|..|++.|++|+|||+.+... ...-|.|... . . .... .
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~-~~~gg~~~~~---------------~-~--~~~~----~ 75 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANG-IAAGGQLTTT---------------T-E--IENF----P 75 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTT-BCTTCGGGGS---------------S-E--ECCS----T
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCC-CCcCcccccc---------------h-h--hccc----C
Confidence 3457899999999999999999999999999999975210 1111222110 0 0 0000 0
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE---cCCcEEEcCEEEECCCCCCcc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC---NDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~---~~g~~i~a~~vV~AdG~~s~~ 152 (426)
..+. .+.+..+...+.+.+.+.|++++ ++ |+++..+++.+.+.+ .++.++.+|.||.|+|..+..
T Consensus 76 ~~~~-~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 76 GFPD-GLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp TCTT-CEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred CCcc-cCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 0111 25678888999999999999998 66 999988888888877 467789999999999986543
No 89
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.27 E-value=3.2e-12 Score=118.93 Aligned_cols=121 Identities=21% Similarity=0.118 Sum_probs=85.4
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
+..+||+||||||+|+++|+.|++.|++|+|||+..... ....|.+.. .. .. ... ..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~-~~~gg~~~~---------------~~-~~--~~~----~~ 62 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMAND-IAPGGQLTT---------------TT-DV--ENF----PG 62 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTT-BCTTCGGGG---------------CS-EE--CCS----TT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccc-cCCCceeee---------------cc-cc--ccC----CC
Confidence 456899999999999999999999999999999821100 001111100 00 00 000 00
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCccc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLV 153 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r 153 (426)
.+. .+++..+.+.|.+.+.+.|++++ ++ |++++.+++.+.|.+ ++.++++|.||.|+|.++...
T Consensus 63 ~~~-~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 63 FPE-GILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp CTT-CEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred Ccc-CCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 111 25678888889888888999998 64 888887777778877 788999999999999876543
No 90
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.26 E-value=8.1e-12 Score=117.86 Aligned_cols=136 Identities=11% Similarity=0.184 Sum_probs=87.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCCCCCCCcccchhHHHhhcCchh-hhhhccCCeEEEecCCCc---
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPKLIWPNNYGVWVDEFEAMDLLD-CLDTTWSGAVVHIDDNTK--- 82 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~--- 82 (426)
.++||+|||||++|+++|..|++.|+ +|+|||+.+ .+ ..|..|..... -+.. .....+... .+.....
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G--g~~~~~~~~~~--~~~~~~~~~~~g~~--~~~~~~~~~~ 75 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG--HSFKHWPKSTR--TITPSFTSNGFGMP--DMNAISMDTS 75 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT--HHHHTSCTTCB--CSSCCCCCGGGTCC--CTTCSSTTCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC--CccccCccccc--ccCcchhcccCCch--hhhhcccccc
Confidence 36899999999999999999999999 999999986 21 11111100000 0000 000000000 0000000
Q ss_pred cccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 83 KDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 83 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.........+++..+...+.+.+.+.|++++ +++|++++.+++.+.|.+.++ ++.+|.||.|+|.++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 76 PAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred ccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 0000011235678888888888888999998 889999998777788888776 6999999999998763
No 91
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.26 E-value=5.3e-10 Score=107.75 Aligned_cols=42 Identities=21% Similarity=0.173 Sum_probs=36.9
Q ss_pred hCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCC
Q 014377 107 TNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFS 149 (426)
Q Consensus 107 ~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~ 149 (426)
+.| +++ +++|++|+.++++++|++.+|++++||.||.|.|..
T Consensus 216 ~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 216 EIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp TCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred hCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 356 888 999999998888899999999889999999999953
No 92
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.24 E-value=1.8e-10 Score=112.68 Aligned_cols=39 Identities=36% Similarity=0.611 Sum_probs=33.5
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
...++||+|||||++|+++|+.|++.|++|+|+|+.+..
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 345789999999999999999999999999999998765
No 93
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.24 E-value=5e-11 Score=110.92 Aligned_cols=116 Identities=21% Similarity=0.239 Sum_probs=83.4
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
++..+||+||||||+|+++|..|++.|++|+|||+... .|.|... ... ..++
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~------gg~~~~~-------~~~-~~~~-------------- 62 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSF------GGALMTT-------TDV-ENYP-------------- 62 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSC------SCGGGSC-------SCB-CCST--------------
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC------CCceecc-------chh-hhcC--------------
Confidence 34568999999999999999999999999999997521 1111000 000 0000
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEE-EEcCCcEEEcCEEEECCCCCCcc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLL-ICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v-~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
..+. .+++..+.+.+.+.+.+.|++++ ++ |++++. ++.+.| .+.+++++.+|.||.|+|.++..
T Consensus 63 ~~~~-~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 63 GFRN-GITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp TCTT-CBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCCC-CCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 0111 25677888888888888899998 54 888876 555667 77888899999999999987643
No 94
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.22 E-value=4.3e-11 Score=110.01 Aligned_cols=113 Identities=19% Similarity=0.259 Sum_probs=83.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
++||+||||||+|+++|..|++.|++|+|||+... |.|.. ..++ .. .. .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g-------G~~~~---~~~~---------------~~----~~--~ 49 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG-------GQILD---TVDI---------------EN----YI--S 49 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT-------GGGGG---CCEE---------------CC----BT--T
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC-------ceecc---cccc---------------cc----cc--C
Confidence 47999999999999999999999999999986421 22211 0000 00 00 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeC---CeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEE---SKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~---~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
....++..+.+.+.+.+.+.|++++ +++|+++..+. +.+.|.+.+|+++.+|.||.|+|.++..
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 50 VPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp BSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 1124567788888888888899999 77999997653 3678888888899999999999987543
No 95
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.21 E-value=9.3e-12 Score=121.26 Aligned_cols=143 Identities=15% Similarity=0.122 Sum_probs=87.5
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCC-----CcEEEEcCCCCCCCCCcccchhHH--HhhcCchhhhhhccCCeEEEec--
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAG-----LSVCSIDPSPKLIWPNNYGVWVDE--FEAMDLLDCLDTTWSGAVVHID-- 78 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G-----~~V~liE~~~~~~~~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~-- 78 (426)
..+||+||||||+|+++|..|++.| ++|+|||+.+..+|... .+... +...-+.++.....+.....+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~--~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~ 106 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGN--TLVSQSELQISFLKDLVSLRNPTSPYSFVNY 106 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGG--GCCSSCBCSSCTTSSSSTTTCTTCTTSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCC--CCCCCCcCCcchhhccccccCCCCCCChhHh
Confidence 4579999999999999999999999 99999999987654321 11000 0000000000000000000000
Q ss_pred --CCCc--cccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEe---CCe--EEEEEcCCc----EEEcCEEEE
Q 014377 79 --DNTK--KDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHE---ESK--SLLICNDGV----TIQAAVVLD 144 (426)
Q Consensus 79 --~~~~--~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~---~~~--~~v~~~~g~----~i~a~~vV~ 144 (426)
.... ...........+..+.+.|...+.+.+++++ +++|++++.+ ++. +.|++.+|. ++.+|.||.
T Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVl 186 (463)
T 3s5w_A 107 LHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVV 186 (463)
T ss_dssp HHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEE
T ss_pred hhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEE
Confidence 0000 0000011124688888888888877788888 8999999876 333 367777765 899999999
Q ss_pred CCCCCCcc
Q 014377 145 ATGFSRCL 152 (426)
Q Consensus 145 AdG~~s~~ 152 (426)
|+|..+.+
T Consensus 187 AtG~~p~~ 194 (463)
T 3s5w_A 187 SPGGTPRI 194 (463)
T ss_dssp CCCCEECC
T ss_pred CCCCCCCC
Confidence 99985543
No 96
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.21 E-value=4e-11 Score=110.76 Aligned_cols=116 Identities=22% Similarity=0.233 Sum_probs=83.3
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
++.+||+||||||+|+++|..|++.|++|+|||+... .|.+... ... ..++ .
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~------gg~~~~~-------~~~-~~~~--------------~ 54 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEK------GGQLTTT-------TEV-ENWP--------------G 54 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSST------TGGGGGC-------SBC-CCST--------------T
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCC------CceEecc-------hhh-hhCC--------------C
Confidence 4568999999999999999999999999999996421 1111000 000 0000 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
.+. .+.+..+.+.+.+.+.+.|++++..+|++++.+++.+.+ +.++.++.+|.||.|+|.++..
T Consensus 55 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 55 DPN-DLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp CCS-SCBHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred CCC-CCCHHHHHHHHHHHHHHCCCEEEEeeeeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 011 256777888888888889999883348888877777777 6778899999999999986543
No 97
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.20 E-value=6.9e-11 Score=114.85 Aligned_cols=137 Identities=16% Similarity=0.181 Sum_probs=86.8
Q ss_pred CcEEEECchHHHHHHHHHHHH---CCCc---EEEEcCCCCCCCCCcccchhHH----HhhcCchhhhhhccCCeE-----
Q 014377 10 VDLAVVGGGPAGLAVAQQVSE---AGLS---VCSIDPSPKLIWPNNYGVWVDE----FEAMDLLDCLDTTWSGAV----- 74 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~---~G~~---V~liE~~~~~~~~~~~g~~~~~----l~~~~~~~~~~~~~~~~~----- 74 (426)
+||+||||||+|+++|..|++ .|++ |+|||+.+..+ |.|... ....++.. ....+....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G-----G~w~~~~~~g~~~~g~~~-~~~~y~~l~~~~~~ 76 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG-----GQWNYTWRTGLDENGEPV-HSSMYRYLWSNGPK 76 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC-----GGGSCCSCCSBCTTSSBC-CCCCCTTCBCSSCG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC-----CEeecCCCCCccccCCCC-cCccccchhhcCCh
Confidence 699999999999999999999 9999 99999986542 222110 00111100 000000000
Q ss_pred --EEecCCCc--cccCCCccccCHHHHHHHHHHHHHhCCcE--EE-EEEEEEEEEeCC--eEEEEEcC---C--cEEEcC
Q 014377 75 --VHIDDNTK--KDLDRPYGRVNRKLLKSKMLQKCITNGVK--FH-QAKVIKVIHEES--KSLLICND---G--VTIQAA 140 (426)
Q Consensus 75 --~~~~~~~~--~~~~~~~~~v~r~~l~~~L~~~~~~~gv~--~~-~~~v~~i~~~~~--~~~v~~~~---g--~~i~a~ 140 (426)
..+.+... .........+++..+.+.|.+.+.+.|++ ++ +++|++++.+++ .+.|++.+ | .++.+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d 156 (464)
T 2xve_A 77 ECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFD 156 (464)
T ss_dssp GGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEES
T ss_pred hhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcC
Confidence 00000000 00000122467889999999988887887 77 999999998765 67777654 4 578999
Q ss_pred EEEECCCCCCcc
Q 014377 141 VVLDATGFSRCL 152 (426)
Q Consensus 141 ~vV~AdG~~s~~ 152 (426)
.||.|+|.+|.-
T Consensus 157 ~VVvAtG~~s~p 168 (464)
T 2xve_A 157 YVVCCTGHFSTP 168 (464)
T ss_dssp EEEECCCSSSSB
T ss_pred EEEECCCCCCCC
Confidence 999999976543
No 98
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.20 E-value=1e-08 Score=100.59 Aligned_cols=56 Identities=14% Similarity=0.224 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhCC-cEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 96 LLKSKMLQKCITNG-VKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 96 ~l~~~L~~~~~~~g-v~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.+.+.|.+.+.+.| ++++ +++|++|+.+++++.|++.+|++++||.||.|.|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 44555666666677 8888 99999999888889999999989999999999997653
No 99
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.17 E-value=1.5e-10 Score=113.92 Aligned_cols=56 Identities=18% Similarity=0.272 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhCCcEEE-EEEEEEEEEe-CCeE-EEEEc-CCc--EEEcC-EEEECCCCCCc
Q 014377 96 LLKSKMLQKCITNGVKFH-QAKVIKVIHE-ESKS-LLICN-DGV--TIQAA-VVLDATGFSRC 151 (426)
Q Consensus 96 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~~-~v~~~-~g~--~i~a~-~vV~AdG~~s~ 151 (426)
.+.+.|.+.+++.|++++ +++|+++..+ ++.+ .|... +++ +++|+ .||.|+|..+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 789999999999999999 9999999987 4543 24433 332 68995 99999999883
No 100
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.16 E-value=1.5e-10 Score=114.12 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=85.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
+..+||+||||||||+++|..|++.|++|+|+|+... |.|.. ..++.. ...
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~G-------G~~~~---~~~~~~-------------------~~~ 260 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFG-------GQVLD---TVDIEN-------------------YIS 260 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTT-------GGGTT---CSCBCC-------------------BTT
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCC-------Ccccc---cccccc-------------------cCC
Confidence 3578999999999999999999999999999986421 22211 001100 000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEe---CCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHE---ESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~---~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
....++..+...+.+.+.+.|++++ +++|+++..+ ++.+.|.+.+|.++++|.||.|+|.++.
T Consensus 261 --~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 261 --VPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp --BSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred --CCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 1124677888888888888999999 8899999754 2367888888989999999999998654
No 101
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.13 E-value=2.6e-10 Score=104.87 Aligned_cols=112 Identities=20% Similarity=0.236 Sum_probs=72.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
.+|||+||||||||+++|..|++.|++|+|||+....+ .|- . . .++ +.++
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG---~~~---~---~----~~i-~~~p---------------- 54 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGG---QMA---N---T----EEV-ENFP---------------- 54 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTG---GGG---G---C----SCB-CCST----------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCC---eee---c---c----ccc-CCcC----------------
Confidence 47999999999999999999999999999999864211 110 0 0 000 0001
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.+..+....+.........+.+..+. ...+..... . ...+...+++++++|.||.|+|....
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~d~liiAtGs~~~ 117 (312)
T 4gcm_A 55 GFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDK-G-EYKVINFGNKELTAKAVIIATGAEYK 117 (312)
T ss_dssp TCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEEC-S-SCEEEECSSCEEEEEEEEECCCEEEC
T ss_pred CccccchHHHHHHHHHHHhhccccccceeeeeeeee-e-cceeeccCCeEEEeceeEEcccCccC
Confidence 11234555666666666666666655 433333222 2 23345567789999999999997543
No 102
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.12 E-value=4.5e-09 Score=103.78 Aligned_cols=43 Identities=16% Similarity=0.110 Sum_probs=38.2
Q ss_pred CcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 109 GVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 109 gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
|++++ +++|++|+.+++++.|++.+|+++.||.||.|.+....
T Consensus 226 g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 67788 99999999888888899999999999999999998753
No 103
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.11 E-value=2.4e-10 Score=112.83 Aligned_cols=146 Identities=16% Similarity=0.287 Sum_probs=78.9
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcc--c-ch-------------hHHHhh-cCch--hhhh
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNY--G-VW-------------VDEFEA-MDLL--DCLD 67 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~--g-~~-------------~~~l~~-~~~~--~~~~ 67 (426)
..++||+|||||+||+++|+.|++ |.+|+||||.+.......+ | .+ .+.+.. .++. +.+.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~ 84 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE 84 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHH
Confidence 457999999999999999999999 9999999998754211100 0 10 000110 0110 0000
Q ss_pred ----h-----cc---CCeEEEecC----CCc----cccC----CCc--cccCHHHHHHHHHHHHHh-CCcEEE-EEEEEE
Q 014377 68 ----T-----TW---SGAVVHIDD----NTK----KDLD----RPY--GRVNRKLLKSKMLQKCIT-NGVKFH-QAKVIK 119 (426)
Q Consensus 68 ----~-----~~---~~~~~~~~~----~~~----~~~~----~~~--~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~ 119 (426)
. .| .+..+.... ... .... ..+ .......+.+.|.+++.+ .|++++ ++.|++
T Consensus 85 ~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~ 164 (540)
T 1chu_A 85 FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVD 164 (540)
T ss_dssp HHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEE
Confidence 0 00 011110000 000 0000 000 001234677778888888 799999 999999
Q ss_pred EEE-eCC------eE-EEEEc---CCc--EEEcCEEEECCCCCCccc
Q 014377 120 VIH-EES------KS-LLICN---DGV--TIQAAVVLDATGFSRCLV 153 (426)
Q Consensus 120 i~~-~~~------~~-~v~~~---~g~--~i~a~~vV~AdG~~s~~r 153 (426)
+.. +++ .+ .|... +|+ ++.|+.||.|+|..|.+-
T Consensus 165 L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 165 LIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp EEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred EEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 987 434 43 24433 564 789999999999998653
No 104
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.10 E-value=1.2e-10 Score=113.26 Aligned_cols=135 Identities=19% Similarity=0.190 Sum_probs=78.8
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhH--HHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVD--EFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
++||+||||||+|+++|..|++.|++|+|||+....+.....++... .+...++.+.+........+. .. . ..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~~-~--~~- 77 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GE-V--TF- 77 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-EC-C--EE-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-CC-C--cc-
Confidence 58999999999999999999999999999999732100000111111 111111111111011110011 00 0 00
Q ss_pred CCcccc-C-----HHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCCCcc
Q 014377 87 RPYGRV-N-----RKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 87 ~~~~~v-~-----r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~s~~ 152 (426)
.+..+ . ...+.+.+.+.+.+.|++++ ++.+. .+++.+.|.+.+| .++.+|.||.|+|.++..
T Consensus 78 -~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 78 -DYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEECC
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 01000 0 13355556667777899998 66542 3556788888888 689999999999987754
No 105
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.09 E-value=1.8e-09 Score=107.51 Aligned_cols=143 Identities=17% Similarity=0.206 Sum_probs=86.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcc--c-chh--H-HHhhcCch------------------
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNY--G-VWV--D-EFEAMDLL------------------ 63 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~--g-~~~--~-~l~~~~~~------------------ 63 (426)
..+||+|||+|++|+++|+.|++.|.+|+|+|+.+..+....+ | .+. . ..+..++.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999998765311100 0 000 0 00000100
Q ss_pred --hhh---------------hhccCCeEEEecCCCccccCCCc----cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEE
Q 014377 64 --DCL---------------DTTWSGAVVHIDDNTKKDLDRPY----GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVI 121 (426)
Q Consensus 64 --~~~---------------~~~~~~~~~~~~~~~~~~~~~~~----~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~ 121 (426)
+.+ ....+...+..... ......+ +......+.+.|.+.+.+.|++++ +++|+++.
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg--~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~ 282 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGG--ASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRIL 282 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTT--CSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCC--CcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEE
Confidence 000 00001001110000 0000000 113467888999999999999999 99999998
Q ss_pred EeC-CeE-EEEE--cCCc--EEEcCEEEECCCCCCcc
Q 014377 122 HEE-SKS-LLIC--NDGV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 122 ~~~-~~~-~v~~--~~g~--~i~a~~vV~AdG~~s~~ 152 (426)
.++ +.+ .|.. .+|+ ++.||.||.|+|..+..
T Consensus 283 ~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 283 EDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp EC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred ECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 766 543 2443 3664 68999999999998864
No 106
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.09 E-value=3.7e-10 Score=112.88 Aligned_cols=147 Identities=20% Similarity=0.253 Sum_probs=87.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCC--CcEEEEcCCCCCCCCCc---cc---------chh----HHHhhc-Cc--hhhh
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAG--LSVCSIDPSPKLIWPNN---YG---------VWV----DEFEAM-DL--LDCL 66 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~~---~g---------~~~----~~l~~~-~~--~~~~ 66 (426)
.++||+|||||+||+++|+.|++.| .+|+|||+.+....... .| .|. +.++.. ++ .+.+
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 4689999999999999999999999 99999999764311100 01 110 011110 00 0000
Q ss_pred h-------------hccCCeEEEecCCCcc---cc-CCCcc---c---cCHHHHHHHHHHHHHhCC-cEEE-EEEEEEEE
Q 014377 67 D-------------TTWSGAVVHIDDNTKK---DL-DRPYG---R---VNRKLLKSKMLQKCITNG-VKFH-QAKVIKVI 121 (426)
Q Consensus 67 ~-------------~~~~~~~~~~~~~~~~---~~-~~~~~---~---v~r~~l~~~L~~~~~~~g-v~~~-~~~v~~i~ 121 (426)
. ..+ +..+........ .. ..... + .....+...|.+++.+.| ++++ +++|+++.
T Consensus 84 ~~~~~~~~~~i~~L~~~-Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~ 162 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELW-GCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHc-CCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEE
Confidence 0 001 000000000000 00 00000 0 124578889999998877 9999 99999999
Q ss_pred EeCCeEE-E--E-EcCCc--EEEcCEEEECCCCCCccccc
Q 014377 122 HEESKSL-L--I-CNDGV--TIQAAVVLDATGFSRCLVQY 155 (426)
Q Consensus 122 ~~~~~~~-v--~-~~~g~--~i~a~~vV~AdG~~s~~r~~ 155 (426)
.+++.+. | . +.+|+ ++.|+.||.|+|.+|.++..
T Consensus 163 ~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~ 202 (602)
T 1kf6_A 163 VDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRY 202 (602)
T ss_dssp EETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSS
T ss_pred EeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccC
Confidence 8876532 2 2 25675 79999999999999987643
No 107
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.05 E-value=6.4e-10 Score=110.91 Aligned_cols=59 Identities=14% Similarity=0.149 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHhCCcEEE-EEEEEEEEEe-CCeE-EEEE---cCCc--EEEcCEEEECCCCCCcc
Q 014377 94 RKLLKSKMLQKCITNGVKFH-QAKVIKVIHE-ESKS-LLIC---NDGV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 94 r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~~-~v~~---~~g~--~i~a~~vV~AdG~~s~~ 152 (426)
-..+...|.+++.+.|++++ +++|+++..+ ++.+ .|.. .+|+ ++.|+.||.|+|..+..
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 36788889999988999999 9999999986 4443 2332 4564 68999999999998754
No 108
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.05 E-value=8.9e-10 Score=107.13 Aligned_cols=143 Identities=17% Similarity=0.182 Sum_probs=82.6
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCc-c-c---------chhH----HHhh-cCch-----------
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN-Y-G---------VWVD----EFEA-MDLL----------- 63 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~-~-g---------~~~~----~l~~-~~~~----------- 63 (426)
||+|||||++|+++|+.|++.|.+|+|||+....+.... . | .+.. .++. .++.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 899999999999999999999999999999832111000 0 0 0000 0100 0000
Q ss_pred --hhhhh--ccCCeEEEe--cCCCccccCCCc--cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEE-EEEc-
Q 014377 64 --DCLDT--TWSGAVVHI--DDNTKKDLDRPY--GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSL-LICN- 132 (426)
Q Consensus 64 --~~~~~--~~~~~~~~~--~~~~~~~~~~~~--~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~- 132 (426)
+.+.. .+ +..+.. ............ +......+.+.|.+++.+.|++++ +++| ++..+++.+. +...
T Consensus 81 ~~~~i~~l~~~-Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESW-GFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHT-TCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETT
T ss_pred HHHHHHHHHHc-CCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEe
Confidence 00000 00 000000 000000000000 112456788889998877899999 8899 9987777552 3332
Q ss_pred CCcEEEcCEEEECCCCCCccccc
Q 014377 133 DGVTIQAAVVLDATGFSRCLVQY 155 (426)
Q Consensus 133 ~g~~i~a~~vV~AdG~~s~~r~~ 155 (426)
++.++.||.||.|+|..+.+...
T Consensus 159 ~~g~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp TEEECCCSEEEECCCCCGGGSSS
T ss_pred CCCeEEeeeEEECCCCCcccCcc
Confidence 33457899999999999977543
No 109
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.02 E-value=1.3e-10 Score=113.55 Aligned_cols=138 Identities=14% Similarity=0.128 Sum_probs=77.6
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCC-CCcccchhH--HHhhcCchhhhhhccCCeEEEecCCCc
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIW-PNNYGVWVD--EFEAMDLLDCLDTTWSGAVVHIDDNTK 82 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~-~~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (426)
|+.++||+|||||++|+++|..|++.|++|+|||+.+..+- ....|+... .+....+.+.+... ....+....
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~-~~~gi~~~~--- 78 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHL-AANGIKYPE--- 78 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHG-GGGTCCCCC---
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHH-HhCCcccCC---
Confidence 45579999999999999999999999999999999654320 001111111 01111111111100 000000000
Q ss_pred cccCCCccc-cC-----HHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC------------cEEEcCEEE
Q 014377 83 KDLDRPYGR-VN-----RKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG------------VTIQAAVVL 143 (426)
Q Consensus 83 ~~~~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g------------~~i~a~~vV 143 (426)
....+.. +. ...+.+.+.+.+.+.|++++ ++.+. .+++.+.|.+.+| .++++|.||
T Consensus 79 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lV 153 (482)
T 1ojt_A 79 --PELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCI 153 (482)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEE
T ss_pred --CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEE
Confidence 0001111 11 12233345556666899988 55433 3556677766565 679999999
Q ss_pred ECCCCCCcc
Q 014377 144 DATGFSRCL 152 (426)
Q Consensus 144 ~AdG~~s~~ 152 (426)
.|+|.++..
T Consensus 154 iAtGs~p~~ 162 (482)
T 1ojt_A 154 IAAGSRVTK 162 (482)
T ss_dssp ECCCEEECC
T ss_pred ECCCCCCCC
Confidence 999987654
No 110
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.02 E-value=1.4e-09 Score=104.18 Aligned_cols=59 Identities=20% Similarity=0.269 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 94 RKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 94 r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+++.|++++ +++|++++.+++++ .|++.+|+++.||.||.|.|..+..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 35677778888888999999 89999998876665 6889999999999999999987643
No 111
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.01 E-value=1.3e-09 Score=109.04 Aligned_cols=59 Identities=15% Similarity=0.204 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEE-EEE---cCCc--EEEcCEEEECCCCCCcc
Q 014377 94 RKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSL-LIC---NDGV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 94 r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~---~~g~--~i~a~~vV~AdG~~s~~ 152 (426)
...+...|.+++.+.|++++ ++.|+++..+++.+. |.. .+|+ ++.|+.||.|+|..+.+
T Consensus 154 G~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 35788899999988999999 999999988766542 332 4564 68999999999998864
No 112
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.00 E-value=3.2e-10 Score=110.83 Aligned_cols=135 Identities=19% Similarity=0.266 Sum_probs=77.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcc---cchhH--HHhhcCchhhhhhccCCeEEEecCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNY---GVWVD--EFEAMDLLDCLDTTWSGAVVHIDDNT 81 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~---g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (426)
+.++||+||||||+|+++|..|++.|++|+|||+.+..+ ..| |+..+ .+......+.+........+.....
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~G--G~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~- 79 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLG--GTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGD- 79 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSC-
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcC--CccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCC-
Confidence 456999999999999999999999999999999965432 111 11111 0111111111110011000111000
Q ss_pred ccccCCCcccc------CHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC--cE------EEcCEEEECC
Q 014377 82 KKDLDRPYGRV------NRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG--VT------IQAAVVLDAT 146 (426)
Q Consensus 82 ~~~~~~~~~~v------~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~------i~a~~vV~Ad 146 (426)
... .+..+ ....+...+.+.+.+.|++++ ++.+. .+++.+.|.+.+| ++ +++|.||.|+
T Consensus 80 -~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAt 153 (478)
T 1v59_A 80 -IKI--NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF---EDETKIRVTPVDGLEGTVKEDHILDVKNIIVAT 153 (478)
T ss_dssp -EEE--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECC
T ss_pred -Ccc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEecCCCcccccccceEEeCEEEECc
Confidence 000 01000 012334445566667899988 66553 2556777877776 56 9999999999
Q ss_pred CCCC
Q 014377 147 GFSR 150 (426)
Q Consensus 147 G~~s 150 (426)
|.++
T Consensus 154 Gs~p 157 (478)
T 1v59_A 154 GSEV 157 (478)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9865
No 113
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.00 E-value=8.7e-10 Score=107.25 Aligned_cols=129 Identities=19% Similarity=0.224 Sum_probs=77.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcc---cchhHH--HhhcCchhhhhhccCCeEEEecCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNY---GVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNT 81 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~---g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (426)
..++||+||||||+|+++|..|++.|++|+|||+.+..+ ..| |+..+. +......+.+. ..+. .
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~G--G~~~~~gciPsk~l~~~a~~~~~~~-~~~~------~-- 70 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELG--GNCLYSGCVPSKTVREVIQTAWRLT-NIAN------V-- 70 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSS--HHHHHHSHHHHHHHHHHHHHHHHHH-HHHC------S--
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC--CcccccCCCchHHHHHHHHHHHHHH-hccc------C--
Confidence 346999999999999999999999999999999776432 111 111111 00000001110 0111 0
Q ss_pred ccccCCCcccc--CHHH---HH--HHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcE--EEcCEEEECCCCCC
Q 014377 82 KKDLDRPYGRV--NRKL---LK--SKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVT--IQAAVVLDATGFSR 150 (426)
Q Consensus 82 ~~~~~~~~~~v--~r~~---l~--~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~--i~a~~vV~AdG~~s 150 (426)
.....+..+ .... +. ..+.+.+.+.|++++..++..+. .+.+.|...+|++ +.+|.||.|+|...
T Consensus 71 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id--~~~~~V~~~~g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 71 --KIPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKD--PTHVIVKTDEGKEIEAETRYMIIASGAET 144 (466)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEE--TTEEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred --CCCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEec--CCeEEEEcCCCcEEEEecCEEEECCCCCc
Confidence 000111111 1111 22 44455555679998844666654 5678888888888 99999999999754
No 114
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.99 E-value=2.8e-09 Score=97.89 Aligned_cols=113 Identities=19% Similarity=0.320 Sum_probs=80.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEE-EcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCS-IDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~l-iE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.++||+||||||||+++|..|++.|++|+| +|+.. . .|.|... ..+ ..++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~-~-----gG~~~~~---~~~-----~~~~~-------------- 54 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-P-----GGQITSS---SEI-----ENYPG-------------- 54 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS-T-----TGGGGGC---SCB-----CCSTT--------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC-C-----Cceeeee---cee-----ccCCC--------------
Confidence 458999999999999999999999999999 99943 1 1222110 000 00010
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeC--CeEEE-EEcCCcEEEcCEEEECCCCCCc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEE--SKSLL-ICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~--~~~~v-~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.+ ..+....+...+.+.+.+.|++++..+|+++ .++ +.+.+ ...++ ++.+|.||.|+|....
T Consensus 55 ~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~ 119 (315)
T 3r9u_A 55 VA-QVMDGISFMAPWSEQCMRFGLKHEMVGVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPK 119 (315)
T ss_dssp CC-SCBCHHHHHHHHHHHHTTTCCEEECCCEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEEC
T ss_pred CC-CCCCHHHHHHHHHHHHHHcCcEEEEEEEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCC
Confidence 01 1356788888899988889999883388898 666 66775 23344 8999999999997543
No 115
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.99 E-value=2.1e-09 Score=108.15 Aligned_cols=59 Identities=22% Similarity=0.273 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEE---cCCc--EEEcCEEEECCCCCCcc
Q 014377 94 RKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLIC---NDGV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 94 r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~---~~g~--~i~a~~vV~AdG~~s~~ 152 (426)
-..+...|.+.+.+.|++++ ++.|+++..+++.+ .|.. .+|+ ++.|+.||.|+|..+.+
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 34788889999888899999 99999998776643 2322 4565 58999999999998854
No 116
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.98 E-value=1.4e-09 Score=104.59 Aligned_cols=111 Identities=17% Similarity=0.222 Sum_probs=73.4
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
+.+||+|||||++|+++|..|++.|. +|+|||+.+...+.+. .+.. ..+. +. .....+
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~------~l~~----~~~~----~~------~~~~~~ 62 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLP------PLSK----AYLA----GK------ATAESL 62 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSG------GGGT----TTTT----TC------SCSGGG
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCC------CCcH----HHhC----CC------CChHHh
Confidence 45899999999999999999999998 7999999864322110 0000 0000 00 000000
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
.+. +.+.+.+.|++++ +++|+.+..++. .|.+.+|+++.+|.||.|+|..+..
T Consensus 63 -----~~~-------~~~~~~~~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p~~ 116 (431)
T 1q1r_A 63 -----YLR-------TPDAYAAQNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRPRP 116 (431)
T ss_dssp -----BSS-------CHHHHHHTTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred -----ccc-------CHHHHHhCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCccC
Confidence 000 1122345799998 888998886554 5667788899999999999986644
No 117
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.96 E-value=1.2e-09 Score=103.23 Aligned_cols=115 Identities=15% Similarity=0.200 Sum_probs=74.3
Q ss_pred CCCCCCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCC
Q 014377 1 MYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDN 80 (426)
Q Consensus 1 ~~~~~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (426)
||.....+...|+|||||+||+++|..|+..+.+|+|||+.+...+.+. .+. ..+... .
T Consensus 1 ~~~~~~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~------~l~-----~~l~g~----------~ 59 (385)
T 3klj_A 1 MHHHHHHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRP------RLN-----EIIAKN----------K 59 (385)
T ss_dssp -------CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGG------GHH-----HHHHSC----------C
T ss_pred CCCccccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccC------hhh-----HHHcCC----------C
Confidence 6777777889999999999999999999888999999999876432211 111 111000 0
Q ss_pred CccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 81 TKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 81 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
....+. .. ..+.+.+.|++++ +++|++++.++. .|++.+|+++.+|.||.|+|...
T Consensus 60 ~~~~l~-----~~-------~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 60 SIDDIL-----IK-------KNDWYEKNNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGSIA 116 (385)
T ss_dssp CGGGTB-----SS-------CHHHHHHTTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred CHHHcc-----CC-------CHHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCCCc
Confidence 000000 00 1122335799999 899999987655 56778899999999999999744
No 118
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.95 E-value=4.1e-10 Score=108.67 Aligned_cols=108 Identities=18% Similarity=0.200 Sum_probs=76.1
Q ss_pred cCcEEEECchHHHHHHHHHHHH---CCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSE---AGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
+.||+|||||++|+++|..|++ .|++|+|||+.+...+.. .+... ..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~---~~~~~---------~~------------------ 53 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP---SNPWV---------GV------------------ 53 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG---GHHHH---------HH------------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC---Ccccc---------cc------------------
Confidence 4699999999999999999999 899999999987422211 00000 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
+..+...+...+.+.+.+.|++++.++|++++.+++ .|++.+|+++.+|.||.|+|..+..
T Consensus 54 ----g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 54 ----GWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp ----TSSCHHHHEEECHHHHHTTTCEEECSCEEEEETTTT--EEEETTSCEEECSEEEECCCCEECG
T ss_pred ----CccCHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCcCc
Confidence 011222333334455556899988668888876554 5778888899999999999986654
No 119
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.94 E-value=9e-10 Score=106.86 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=77.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHH--HhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
.++||+||||||+|+++|..|++.|++|+|||+....+....+++.... +......+.+.. .....+.+.. ..
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~~g~~~~~---~~- 76 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKH-SEEMGIKAEN---VT- 76 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHT-CGGGTEECCS---CE-
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHH-HHhcCcccCC---Cc-
Confidence 3589999999999999999999999999999997321100011111110 110000011100 0000011100 00
Q ss_pred CCCccc-cCH-----HHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC-cEEEcCEEEECCCCCCcc
Q 014377 86 DRPYGR-VNR-----KLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG-VTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 86 ~~~~~~-v~r-----~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g-~~i~a~~vV~AdG~~s~~ 152 (426)
.++.. +.+ ..+.+.+.+.+.+.|++++ ++.+ . .+++.+.|.+.+| .++.+|.||.|+|..+..
T Consensus 77 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~--id~~~v~V~~~~G~~~i~~d~lViATGs~p~~ 147 (455)
T 1ebd_A 77 -IDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-F--VDANTVRVVNGDSAQTYTFKNAIIATGSRPIE 147 (455)
T ss_dssp -ECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-E--EETTEEEEEETTEEEEEECSEEEECCCEEECC
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-E--ccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC
Confidence 01111 111 1244455666667899988 5543 2 3466788888777 689999999999986543
No 120
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.93 E-value=1.8e-09 Score=105.31 Aligned_cols=139 Identities=15% Similarity=0.185 Sum_probs=78.4
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-CcccchhHH--HhhcCchhhhhhccCCeEEEecCCCcc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP-NNYGVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNTKK 83 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~-~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
..++||+||||||+|+++|..|++.|++|+|||+.+..+-. ...++.... +....+.+.+........+.... .
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~---~ 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSN---V 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESC---E
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCC---C
Confidence 45799999999999999999999999999999998643210 011111110 11000101110000000011100 0
Q ss_pred ccCCCccc-cC-----HHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCCCccc
Q 014377 84 DLDRPYGR-VN-----RKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFSRCLV 153 (426)
Q Consensus 84 ~~~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~s~~r 153 (426)
.. .+.. +. ...+.+.+.+.+.+.|++++ ++.+ . .+++.+.|.+.+| .++++|.||.|+|.++...
T Consensus 81 ~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~--~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 81 EI--DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGK-F--VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp EE--CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-E--EETTEEEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred cc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-E--ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 00 1111 11 12344445555666789988 5543 2 3556777877777 6899999999999876543
No 121
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.91 E-value=1.8e-09 Score=106.52 Aligned_cols=53 Identities=17% Similarity=0.178 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCC
Q 014377 95 KLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFS 149 (426)
Q Consensus 95 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~ 149 (426)
..+.+.|.+.+.+.|++++ +++|+++..+++. +++.+|+++.||.||.+.-..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHH
Confidence 4566677777777889998 9999999877664 567899999999999876543
No 122
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.89 E-value=3.3e-09 Score=103.87 Aligned_cols=136 Identities=18% Similarity=0.175 Sum_probs=73.2
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCC-CCcccchhHH--HhhcCchhhhhhccCCeEEEecCCCcc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIW-PNNYGVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNTKK 83 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~-~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
++++||+||||||+|+++|..|++.|++|+|||+.+..+- ....|++... +.................+.....
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~--- 99 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP--- 99 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC---
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC---
Confidence 3569999999999999999999999999999998754321 0011222111 111001111111011111111100
Q ss_pred ccCCCccc-c-----CHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCC
Q 014377 84 DLDRPYGR-V-----NRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFS 149 (426)
Q Consensus 84 ~~~~~~~~-v-----~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~ 149 (426)
. ..+.. + ....+...+.....+.+++++...+.. .+.+.+.|...+| .++.+|.||.|+|..
T Consensus 100 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~--~~~~~~~v~~~~g~~~~~~~d~lViATGs~ 169 (491)
T 3urh_A 100 K--LNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV--LGQGKVSVTNEKGEEQVLEAKNVVIATGSD 169 (491)
T ss_dssp E--ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE--CSSSEEEEECTTSCEEEEECSEEEECCCEE
T ss_pred c--cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE--ecCCEEEEEeCCCceEEEEeCEEEEccCCC
Confidence 0 01111 0 012233334445556899988433332 3455677877777 579999999999965
No 123
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.89 E-value=6.6e-09 Score=101.31 Aligned_cols=135 Identities=17% Similarity=0.199 Sum_probs=76.3
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcc---cchhHH--HhhcCchhhhh---hccCCeEEEec
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNY---GVWVDE--FEAMDLLDCLD---TTWSGAVVHID 78 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~---g~~~~~--l~~~~~~~~~~---~~~~~~~~~~~ 78 (426)
+.++||+||||||+|+++|..|++.|++|+|||+.+..+ ..| |+.... +........+. ....+.. ..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~G--G~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~--~~ 79 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLG--GTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIE--MS 79 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEE--ES
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcC--CcccccCccchHHHHHHHHHHHHhhhhhHhhCccc--cC
Confidence 346899999999999999999999999999999986432 111 111110 11000000000 0000110 00
Q ss_pred CCCccccCCCcccc-C-----HHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcC-C-cEEEcCEEEECCCCCC
Q 014377 79 DNTKKDLDRPYGRV-N-----RKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICND-G-VTIQAAVVLDATGFSR 150 (426)
Q Consensus 79 ~~~~~~~~~~~~~v-~-----r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~-g-~~i~a~~vV~AdG~~s 150 (426)
. .. .++..+ . ...+...+.+.+.+.|++++..++..+ +++.+.|.+.+ + +++.+|.||.|+|..+
T Consensus 80 ~---~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 80 E---VR--LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKIT--GKNQVTATKADGGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp C---EE--ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEE--ETTEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred C---Cc--cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--cCCEEEEEecCCCcEEEEeCEEEECCCCCC
Confidence 0 00 011111 1 112333445566668999883333333 45677888777 4 5799999999999866
Q ss_pred cc
Q 014377 151 CL 152 (426)
Q Consensus 151 ~~ 152 (426)
..
T Consensus 153 ~~ 154 (474)
T 1zmd_A 153 TP 154 (474)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 124
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.88 E-value=3e-09 Score=103.78 Aligned_cols=139 Identities=17% Similarity=0.108 Sum_probs=75.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcc---cchhHH-H-hhcCchhhhhhccCCeEEEecCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNY---GVWVDE-F-EAMDLLDCLDTTWSGAVVHIDDNT 81 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~---g~~~~~-l-~~~~~~~~~~~~~~~~~~~~~~~~ 81 (426)
+.++||+||||||+|+++|..|++.|.+|+|||+++. ..+| |+.... + ....+...+. ......+......
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~---GG~~~n~gciP~k~l~~~~~~~~~~~-~~~~~g~~~~~~~ 84 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKAL---GGTCVNVGCVPKKVMWYASDLATRVS-HANEYGLYQNLPL 84 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCT---THHHHHHSHHHHHHHHHHHHHHHHHT-TTTTTTBSTTSCC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCc---CCcCcccCcHHHHHHHHHHHHHHHHH-hHHhcCccccccc
Confidence 4579999999999999999999999999999999742 1222 111111 0 0000000000 0000000000000
Q ss_pred cc-ccCCCcccc-C-----HHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCc--EEEcCEEEECCCCCCc
Q 014377 82 KK-DLDRPYGRV-N-----RKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGV--TIQAAVVLDATGFSRC 151 (426)
Q Consensus 82 ~~-~~~~~~~~v-~-----r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~--~i~a~~vV~AdG~~s~ 151 (426)
.. .....+..+ . ...+...+.+.+.+.|++++..+++.+ +.+.+.|.+.+|+ ++.+|.||.|+|....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~ 161 (479)
T 2hqm_A 85 DKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFN--KDGNVEVQKRDNTTEVYSANHILVATGGKAI 161 (479)
T ss_dssp SGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC--TTSCEEEEESSSCCEEEEEEEEEECCCEEEC
T ss_pred ccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--eCCEEEEEeCCCcEEEEEeCEEEEcCCCCCC
Confidence 00 000011111 0 122334445555668999884456544 3455777777776 8999999999997543
No 125
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.88 E-value=3e-09 Score=104.83 Aligned_cols=138 Identities=22% Similarity=0.226 Sum_probs=74.5
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCC--cc-cchh------HH-H-hhcCchhhhhhc-cCCe
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPN--NY-GVWV------DE-F-EAMDLLDCLDTT-WSGA 73 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~--~~-g~~~------~~-l-~~~~~~~~~~~~-~~~~ 73 (426)
++.+|||+||||||+|+++|..|++.|.+|+|||+.+...+.. .. |.|. +. + ........+... ..+.
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~ 108 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGW 108 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCc
Confidence 3456999999999999999999999999999999965322221 11 1121 11 0 000000000000 0000
Q ss_pred EEEecCCCccccCCCcccc-C-H----HHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCc--EEEcCEEEEC
Q 014377 74 VVHIDDNTKKDLDRPYGRV-N-R----KLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGV--TIQAAVVLDA 145 (426)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~v-~-r----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~--~i~a~~vV~A 145 (426)
..... ....+..+ . . ..+...+.......+++++..++..+ +.+.+.|...+|+ ++.+|.||.|
T Consensus 109 --~~~~~----~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~--d~~~v~v~~~~g~~~~i~~d~lViA 180 (519)
T 3qfa_A 109 --KVEET----VKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFI--GPHRIKATNNKGKEKIYSAERFLIA 180 (519)
T ss_dssp --CCCSS----CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEE--ETTEEEEECTTCCCCEEEEEEEEEC
T ss_pred --ccCCc----CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--eCCEEEEEcCCCCEEEEECCEEEEE
Confidence 00000 00011110 0 1 12222333445567999884444333 3556777777764 8999999999
Q ss_pred CCCCCc
Q 014377 146 TGFSRC 151 (426)
Q Consensus 146 dG~~s~ 151 (426)
+|....
T Consensus 181 TGs~p~ 186 (519)
T 3qfa_A 181 TGERPR 186 (519)
T ss_dssp CCEEEC
T ss_pred CCCCcC
Confidence 997543
No 126
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.85 E-value=8.1e-09 Score=101.15 Aligned_cols=145 Identities=17% Similarity=0.076 Sum_probs=84.8
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCC--------------CcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCe
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAG--------------LSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGA 73 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G--------------~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 73 (426)
..+||||||+||+||++|.+|.+.| ..++.+|+.+...|....-.--..++---+.+++....|..
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s 117 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRS 117 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCC
Confidence 4589999999999999999998754 45677888776655432100000000000011111111110
Q ss_pred EEEec----CCC--ccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCC--------eEEEEEcCC----
Q 014377 74 VVHID----DNT--KKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEES--------KSLLICNDG---- 134 (426)
Q Consensus 74 ~~~~~----~~~--~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~--------~~~v~~~~g---- 134 (426)
...|. ... ............|..+.+.|...+.+-+..+. +++|++++..+. .++|++.++
T Consensus 118 ~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~ 197 (501)
T 4b63_A 118 SFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGE 197 (501)
T ss_dssp TTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCC
T ss_pred ccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCce
Confidence 00000 000 00001111246799999999999988666666 999999987542 477877654
Q ss_pred -cEEEcCEEEECCCCCCcc
Q 014377 135 -VTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 135 -~~i~a~~vV~AdG~~s~~ 152 (426)
+++.|+.||.|+|....+
T Consensus 198 ~~~~~ar~vVlatG~~P~i 216 (501)
T 4b63_A 198 ISARRTRKVVIAIGGTAKM 216 (501)
T ss_dssp EEEEEEEEEEECCCCEECC
T ss_pred EEEEEeCEEEECcCCCCCC
Confidence 468999999999965433
No 127
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.83 E-value=1.1e-08 Score=100.05 Aligned_cols=112 Identities=13% Similarity=0.082 Sum_probs=72.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCC---CcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccc
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAG---LSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKD 84 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G---~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
+.+||+|||||++|+++|..|++.| .+|+|||+.+...+ ..|+.. . .+.... ... ..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~-~~~~~~--~--------~~~~~~-------~~~--~~ 93 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISF-LGAGMA--L--------WIGEQI-------AGP--EG 93 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSB-CGGGHH--H--------HHTTSS-------SCS--GG
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCc-cccccc--h--------hhcCcc-------CCH--HH
Confidence 3589999999999999999999988 99999999875322 111110 0 000000 000 00
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE-cCCcEEEcCEEEECCCCCCc
Q 014377 85 LDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC-NDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 85 ~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~~i~a~~vV~AdG~~s~ 151 (426)
+... +.+.+.+.|++++ +++|+.+..+++.+.+.. .++.++.+|.||.|+|..+.
T Consensus 94 ~~~~------------~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 94 LFYS------------DKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp GBSC------------CHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEEC
T ss_pred hhhc------------CHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcC
Confidence 0000 0122345789998 888999887777666652 22357999999999997654
No 128
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.83 E-value=1.4e-08 Score=98.73 Aligned_cols=137 Identities=16% Similarity=0.147 Sum_probs=75.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCC-CCcccchhHH--HhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIW-PNNYGVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~-~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
++||+||||||+|+++|..|++.|++|+|||+.+..+- ....|+.... +....+.+.+........+..... ..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~--~~- 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEG--VT- 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGG--CE-
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCC--Cc-
Confidence 48999999999999999999999999999999864320 0011111110 110001011100000000000000 00
Q ss_pred CCCccc-cC-----HHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCCCc
Q 014377 86 DRPYGR-VN-----RKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 86 ~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~s~ 151 (426)
..+.. .. ...+...+.+.+.+.|++++..++..+ +.+.+.|.+.+| .++.+|.||.|+|..+.
T Consensus 79 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i--~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~ 149 (468)
T 2qae_A 79 -MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFE--TAHSIRVNGLDGKQEMLETKKTIIATGSEPT 149 (468)
T ss_dssp -ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCEEEC
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--eCCEEEEEecCCceEEEEcCEEEECCCCCcC
Confidence 01111 11 112333445555567899883333333 456788888888 78999999999997654
No 129
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.83 E-value=6.5e-09 Score=100.70 Aligned_cols=111 Identities=13% Similarity=0.176 Sum_probs=72.5
Q ss_pred CcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
.||+|||||+||+++|..|++. |.+|+|||+.+..++.. ++.. .... .... .. ..+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~-~~~~----------~~~~-----~~~~--~~--~~~-- 60 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLS-GGLS----------AYFN-----HTIN--EL--HEA-- 60 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCC-C-------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccC-ccch----------hhhc-----CCCC--CH--HHh--
Confidence 5999999999999999999998 99999999988654311 1100 0000 0000 00 000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE-cCCcEEEcCEEEECCCCCCcc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC-NDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~~i~a~~vV~AdG~~s~~ 152 (426)
.+ . +.+.+.+.|++++ +++|++++.+++.+.+.. .++.++.+|.||.|+|.....
T Consensus 61 ~~--~--------~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~ 117 (452)
T 3oc4_A 61 RY--I--------TEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFS 117 (452)
T ss_dssp CC--C--------CHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCC
T ss_pred hc--C--------CHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCC
Confidence 00 0 1222345789988 899999988877776652 345689999999999986543
No 130
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.83 E-value=1.7e-08 Score=98.42 Aligned_cols=111 Identities=17% Similarity=0.261 Sum_probs=72.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+||+|||||++|+++|..|++. |.+|+|||+.+...+ ..|+. . ..+..... . ...+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-~~~~~--~--------~~~~~~~~-------~--~~~l- 94 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY-AQCGL--P--------YVISGAIA-------S--TEKL- 94 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB-CGGGH--H--------HHHTTSSS-------C--GGGG-
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC-CCCCc--c--------hhhcCCcC-------C--HHHh-
Confidence 46999999999999999999986 999999999875432 11211 0 00000000 0 0000
Q ss_pred CCccccCHHHHHHHHHHHH-HhCCcEEE-EEEEEEEEEeCCeEEEEE-cCCc--EEEcCEEEECCCCCCc
Q 014377 87 RPYGRVNRKLLKSKMLQKC-ITNGVKFH-QAKVIKVIHEESKSLLIC-NDGV--TIQAAVVLDATGFSRC 151 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~-~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vV~AdG~~s~ 151 (426)
+.+ ..+.+ ...|++++ +++|+.++.+++.+.+.. .+|+ ++.+|.||.|+|..+.
T Consensus 95 -----~~~------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 95 -----IAR------NVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp -----BSS------CHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred -----hhc------CHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 000 01122 23589998 899999987777777765 4565 7999999999997654
No 131
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.82 E-value=2e-08 Score=97.69 Aligned_cols=138 Identities=17% Similarity=0.062 Sum_probs=73.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHH--HhhcCchhhhhhccCCeEEEecCCCccc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNTKKD 84 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
+.++||+|||||++|+++|..|++.|++|+|||++...+.-...|+..+. +....+.... ...+.. .......
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~-~~~~~~----~g~~~~~ 76 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLR-RESPFD----GGIAATV 76 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHH-HCCTTT----TTSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHH-hhhhhc----CCccCCC
Confidence 45689999999999999999999999999999997321100011111110 0000000000 000000 0000000
Q ss_pred cCCCcccc-C-HHHHHHHH-----HHHHHhC-CcEEEEEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCCCc
Q 014377 85 LDRPYGRV-N-RKLLKSKM-----LQKCITN-GVKFHQAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 85 ~~~~~~~v-~-r~~l~~~L-----~~~~~~~-gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~s~ 151 (426)
....+..+ . ...+.+.| .+.+.+. |++++..++..+. .+.+.|.+.+| .++++|.||.|+|....
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~--~~~~~v~~~~g~~~~~~~d~lviAtGs~p~ 151 (467)
T 1zk7_A 77 PTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKD--DQSLTVRLNEGGERVVMFDRCLVATGASPA 151 (467)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEE--TTEEEEEETTSSEEEEECSEEEECCCEEEC
T ss_pred CccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEcc--CCEEEEEeCCCceEEEEeCEEEEeCCCCCC
Confidence 00011111 1 11111222 2233445 8998854565543 55778888888 68999999999996543
No 132
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.82 E-value=3.2e-09 Score=102.84 Aligned_cols=112 Identities=16% Similarity=0.123 Sum_probs=71.2
Q ss_pred CcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
+||+|||||++|+++|..|++. |.+|+|||+++...+ ..|+. . ..+...... .+ ...+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-~~~~~--~--------~~~~g~~~~-----~~--~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF-LSCGI--A--------LYLGKEIKN-----ND--PRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB-CGGGH--H--------HHHTTCBGG-----GC--GGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc-ccccc--h--------hhhcCCccc-----CC--HHHhhh
Confidence 5899999999999999999998 999999999875322 11111 0 000000000 00 000000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEc-C--CcEEEcCEEEECCCCCCc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICN-D--GVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~-~--g~~i~a~~vV~AdG~~s~ 151 (426)
.+.+.+.+.|++++ +++|..+..+++.+.+... + +.++.+|.||.|+|..+.
T Consensus 63 ------------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 63 ------------SSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp ------------CCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred ------------cCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC
Confidence 01222345789987 8899999877776666542 2 467999999999997554
No 133
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.82 E-value=9.8e-09 Score=103.29 Aligned_cols=60 Identities=10% Similarity=0.112 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHhC--CcEEE-EEEEEEEEEeCC---eEE-EE---EcCCc--EEEcCEEEECCCCCCcc
Q 014377 93 NRKLLKSKMLQKCITN--GVKFH-QAKVIKVIHEES---KSL-LI---CNDGV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 93 ~r~~l~~~L~~~~~~~--gv~~~-~~~v~~i~~~~~---~~~-v~---~~~g~--~i~a~~vV~AdG~~s~~ 152 (426)
....+...|.+++.+. |++++ ++.|+++..+++ .+. |. ..+|+ ++.|+.||.|+|..+.+
T Consensus 164 ~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 164 NGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 3456777888888776 99999 999999988765 432 22 23453 68999999999987753
No 134
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.82 E-value=2.3e-08 Score=96.18 Aligned_cols=55 Identities=16% Similarity=0.296 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhCCcEEE-EEEEEEEEE-eCCe-EEEEEcCCcEEEcCEEEECCCCC
Q 014377 95 KLLKSKMLQKCITNGVKFH-QAKVIKVIH-EESK-SLLICNDGVTIQAAVVLDATGFS 149 (426)
Q Consensus 95 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~-~~~~-~~v~~~~g~~i~a~~vV~AdG~~ 149 (426)
..+.+.|.+.+.+.|++++ +++|+++.. ++++ +.|++.+|++++||.||.+.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4566677788888999999 999999998 4454 56888889899999999999976
No 135
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.82 E-value=1.4e-08 Score=102.39 Aligned_cols=144 Identities=16% Similarity=0.215 Sum_probs=82.2
Q ss_pred CcCcEEEECchHHHHHHHHHHH---H-CCCcEEEEcCCCCCCCCCc-ccch-----h------------HH-----Hh-h
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVS---E-AGLSVCSIDPSPKLIWPNN-YGVW-----V------------DE-----FE-A 59 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La---~-~G~~V~liE~~~~~~~~~~-~g~~-----~------------~~-----l~-~ 59 (426)
.++||||||||+||+++|+.|+ + .|.+|+||||.+....... .|.+ . +. +. .
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g 100 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDM 100 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHh
Confidence 3589999999999999999999 6 8999999999874311110 0110 0 00 00 0
Q ss_pred cCch--hhhh----h-----cc---CCeEEEecCCCccccCCC--ccccCHHHHHHHHHHHHHhC-Cc-EEE-EEEEEEE
Q 014377 60 MDLL--DCLD----T-----TW---SGAVVHIDDNTKKDLDRP--YGRVNRKLLKSKMLQKCITN-GV-KFH-QAKVIKV 120 (426)
Q Consensus 60 ~~~~--~~~~----~-----~~---~~~~~~~~~~~~~~~~~~--~~~v~r~~l~~~L~~~~~~~-gv-~~~-~~~v~~i 120 (426)
.++. +.+. . .| -+..+..... ....... ...++...+.+.|.+.+.+. |+ +++ ++.|+++
T Consensus 101 ~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~-g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L 179 (643)
T 1jnr_A 101 MGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPD-GKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFEL 179 (643)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTT-SCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEE
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCC-CCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEE
Confidence 0110 0000 0 00 0111100000 0000000 00122334667777777776 99 899 9999999
Q ss_pred EEeCC---eEE-EE---EcCCc--EEEcCEEEECCCCCCcc
Q 014377 121 IHEES---KSL-LI---CNDGV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 121 ~~~~~---~~~-v~---~~~g~--~i~a~~vV~AdG~~s~~ 152 (426)
..+++ .+. |. ..+|+ ++.|+.||.|+|..+..
T Consensus 180 ~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 180 LKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp EECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred EEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 88765 542 32 24564 68999999999998864
No 136
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.80 E-value=2.5e-09 Score=104.39 Aligned_cols=136 Identities=15% Similarity=0.192 Sum_probs=74.9
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCccc-chhHH--------HhhcCchhhhhhccCCeEEEec
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYG-VWVDE--------FEAMDLLDCLDTTWSGAVVHID 78 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g-~~~~~--------l~~~~~~~~~~~~~~~~~~~~~ 78 (426)
.+|||+||||||+|+++|..|++.|++|+|||+.+..+....+| .|... +.................+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 46999999999999999999999999999999986432211122 22110 0000000000000011111110
Q ss_pred CCCccccCCCccc-c-CH----HHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCCC
Q 014377 79 DNTKKDLDRPYGR-V-NR----KLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFSR 150 (426)
Q Consensus 79 ~~~~~~~~~~~~~-v-~r----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~s 150 (426)
. .. ..+.. . .. ..+...+.....+.|++++..++.. .+.+.+.|...+| .++.+|.||.|+|...
T Consensus 82 ~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~--~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p 154 (476)
T 3lad_A 82 E---VA--IDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL--LAGKKVEVTAADGSSQVLDTENVILASGSKP 154 (476)
T ss_dssp C---CE--ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE--CSTTCEEEECTTSCEEEECCSCEEECCCEEE
T ss_pred C---Cc--cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE--ecCCEEEEEcCCCceEEEEcCEEEEcCCCCC
Confidence 0 00 01111 0 01 1233333444555789988444333 3456677877777 5799999999999754
No 137
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.80 E-value=2.3e-09 Score=104.83 Aligned_cols=134 Identities=20% Similarity=0.130 Sum_probs=72.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHH--HhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
.++||+||||||+|+++|+.|++.|++|+|||+....+.....|+.... +........+.. .+...+.... ..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~-~~~~g~~~~~---~~- 99 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSK-SIGFGWKYAD---PI- 99 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHH-HGGGTBCCCC---CE-
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHH-HHhCCcccCC---Cc-
Confidence 3689999999999999999999999999999994321110111211111 000000000000 0000000000 00
Q ss_pred CCCccc-c-----CHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEc-CCcEEEcCEEEECCCCCCc
Q 014377 86 DRPYGR-V-----NRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICN-DGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 86 ~~~~~~-v-----~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~-~g~~i~a~~vV~AdG~~s~ 151 (426)
..+.. + ....+...+.+.+.+.|++++..++..+. +. .+.+. ++.++.+|.+|.|+|....
T Consensus 100 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~--~~--~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 100 -FNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVD--EH--TLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp -ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE--TT--EEEETTTCCEEEEEEEEECCCEEEC
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEee--CC--EEEEecCCeEEEeCEEEEccCCCcc
Confidence 01110 0 11234445556666789998854554443 33 34444 7789999999999997543
No 138
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.80 E-value=1.8e-09 Score=105.39 Aligned_cols=136 Identities=15% Similarity=0.121 Sum_probs=71.9
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHH--HhhcCchhhhhhccCCeEEEecCCCccc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNTKKD 84 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
+.++||+||||||+|+++|..|++.|++|+|||++...+....+|+.... +........+... .... +.. ..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~-~~~g--~~~---~~ 91 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDH-ADYG--FPS---CE 91 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTT-TTTT--SCC---CC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHH-HhcC--ccC---CC
Confidence 45799999999999999999999999999999976421110111111111 0100000111000 0000 000 00
Q ss_pred cCCCcccc------CHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 85 LDRPYGRV------NRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 85 ~~~~~~~v------~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
...++..+ ....+...+...+...|++++..++..+. .....|. .+++++++|.||.|+|....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~--~~~~~v~-~~g~~~~~d~lviAtG~~p~ 161 (478)
T 3dk9_A 92 GKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS--DPKPTIE-VSGKKYTAPHILIATGGMPS 161 (478)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECS--CSSCEEE-ETTEEEECSCEEECCCEEEC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEee--CCeEEEE-ECCEEEEeeEEEEccCCCCC
Confidence 00111111 01233344555566689998744443332 2223444 46778999999999996543
No 139
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.79 E-value=2.8e-08 Score=94.07 Aligned_cols=100 Identities=17% Similarity=0.223 Sum_probs=81.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-+|+|||||+.|+.+|..|++.|.+|+++|+.+....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP------------------------------------------ 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh------------------------------------------
Confidence 35799999999999999999999999999998763210
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
......+.+.+.+.+++.|++++ +++|++++.+++++.|++.+|+++.+|.||.|+|..+..
T Consensus 183 --~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 183 --GLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp --TTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred --cccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 00112345566677777899999 889999998878888899999999999999999987653
No 140
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.78 E-value=1.8e-08 Score=101.03 Aligned_cols=114 Identities=14% Similarity=0.155 Sum_probs=75.5
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKD 84 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
++..||+|||||+||+++|..|++. |.+|+|||+.+...+.. ++. ...+..... .. ..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~-~~l----------p~~~~g~~~--------~~-~~ 93 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFAN-CGL----------PYYIGGVIT--------ER-QK 93 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCG-GGH----------HHHHTTSSC--------CG-GG
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccC-CCC----------chhhcCcCC--------Ch-HH
Confidence 3457999999999999999999998 89999999988654321 111 000000000 00 00
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE-cCCc--EEEcCEEEECCCCCCc
Q 014377 85 LDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC-NDGV--TIQAAVVLDATGFSRC 151 (426)
Q Consensus 85 ~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vV~AdG~~s~ 151 (426)
. +...+...+.+.|++++ +++|+++..+++.+.+.. .+|+ ++.+|.||.|+|....
T Consensus 94 ------~-----~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (588)
T 3ics_A 94 ------L-----LVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPI 153 (588)
T ss_dssp ------G-----BSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred ------h-----hccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCC
Confidence 0 11112223345789998 999999998877777764 3555 7899999999997543
No 141
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.78 E-value=1e-08 Score=99.89 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=64.6
Q ss_pred cCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
+.||+|||||++|+++|..|++. |.+|+|||+.+...+.. ++ +...+...+.. . ..+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~-~g----------l~~~~~g~~~~-----~----~~~- 61 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGG-CG----------IPYYVSGEVSN-----I----ESL- 61 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccc-cc----------cchhhcCCCCc-----h----HHh-
Confidence 46999999999999999999998 99999999987643211 11 10000000000 0 000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE-cCCc--EEEcCEEEECCCCCCc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC-NDGV--TIQAAVVLDATGFSRC 151 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vV~AdG~~s~ 151 (426)
.++ +..+...+.......|++++ +++|++++.+++.+.+.. .+|. ++.+|.||.|+|....
T Consensus 62 ~~~----~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 126 (472)
T 3iwa_A 62 QAT----PYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKAN 126 (472)
T ss_dssp -----------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred ccc----cchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcC
Confidence 000 00011122222234689988 899999988777777665 3354 7999999999997543
No 142
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.77 E-value=2.8e-09 Score=103.56 Aligned_cols=134 Identities=15% Similarity=0.120 Sum_probs=72.2
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHH--HhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
.++||+||||||+|+++|+.|++.|++|+|||+....+....+|+.... +........+.. .+...+..... .
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~-~~~~g~~~~~~---~- 78 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFED-AAGFGWTVGES---R- 78 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHH-GGGGTEEECCC---E-
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHH-HHhcCcccCCC---C-
Confidence 4699999999999999999999999999999994321100011221111 011011111110 11111111110 0
Q ss_pred CCCccc-c-----CHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEE-cCCcEEEcCEEEECCCCCCc
Q 014377 86 DRPYGR-V-----NRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLIC-NDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 86 ~~~~~~-v-----~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~g~~i~a~~vV~AdG~~s~ 151 (426)
..+.. + ....+...+.+.+.+.|++++..++..+. +. .+.+ .+++++.+|.+|.|+|....
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~--~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 79 -FDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAG--PN--TVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp -ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SS--EEEETTTTEEEEEEEEEECCCEEEC
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee--CC--EEEEecCCeEEEeCEEEEecCCCcc
Confidence 01110 1 11234444555556678998744544432 22 3444 56788999999999997543
No 143
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.76 E-value=5.6e-09 Score=99.83 Aligned_cols=108 Identities=18% Similarity=0.160 Sum_probs=68.4
Q ss_pred CcEEEECchHHHHHHHHHHHH---CCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSE---AGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.||+|||||++|+++|..|++ .|.+|+|||+++...+... + +. .... ....
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~---~-----------------~~----~~~~--~~~~ 55 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA---L-----------------PH----VAIG--VRDV 55 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS---S-----------------CC----CCSS--CCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc---h-----------------hh----cccC--CcCH
Confidence 479999999999999999999 8999999999873211000 0 00 0000 0000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCCCc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~s~ 151 (426)
.. +...+.+.+.+.|++++..+|++++.++..+.+...++ .++.+|.||.|+|....
T Consensus 56 ~~--------~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 56 DE--------LKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp CC--------EEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred HH--------HHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 00 11122334445789988558999887666544433222 24999999999998654
No 144
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.76 E-value=1.2e-08 Score=99.60 Aligned_cols=41 Identities=37% Similarity=0.477 Sum_probs=32.8
Q ss_pred CCCCCCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCC
Q 014377 1 MYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPS 41 (426)
Q Consensus 1 ~~~~~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~ 41 (426)
|-+.+.+..|||+||||||+|+++|..|++.|++|+|||+.
T Consensus 1 M~p~~~~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 1 MAPVQGSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp ------CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCcCCCCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 44444456799999999999999999999999999999963
No 145
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.76 E-value=3.3e-08 Score=95.78 Aligned_cols=38 Identities=45% Similarity=0.737 Sum_probs=34.8
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
+.++||+|||||++|+++|+.|++.|++|+|+|+++..
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 35689999999999999999999999999999998654
No 146
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.75 E-value=2.3e-09 Score=103.19 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=70.0
Q ss_pred CcEEEECchHHHHHHHHHHHH--CCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSE--AGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~--~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
.||+|||||++|+++|..|++ .|++|+|||+++...+.. .+..... +. ... ..+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~---~~~~~~~--g~-------~~~----------~~~~~ 60 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP---AFPHLAM--GW-------RKF----------EDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG---GHHHHHH--TC-------SCG----------GGSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC---Ccchhcc--Cc-------cCH----------HHHHH
Confidence 699999999999999999999 899999999987533211 1100000 00 000 00000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
. +.+.+.+.|++++..+|+.++.+.. .|.+.+++++.+|.||.|+|....
T Consensus 61 ~------------~~~~~~~~gv~~~~~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 61 P------------LAPLLPKFNIEFINEKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp E------------STTTGGGGTEEEECSCEEEEETTTT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred H------------HHHHHHhcCCEEEEEEEEEEECCCC--EEEECCCcEEECCEEEEcCCcccc
Confidence 0 1112334689988558888876544 567788888999999999998643
No 147
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.75 E-value=1.3e-08 Score=93.81 Aligned_cols=113 Identities=19% Similarity=0.156 Sum_probs=71.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCc-------------ccch---------hHHHhhcCchhhhh
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN-------------YGVW---------VDEFEAMDLLDCLD 67 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~-------------~g~~---------~~~l~~~~~~~~~~ 67 (426)
+||+|||||+||+.+|+.|++.|.+|+|+|+++....+.. .|.. ...+..++- .+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg--~m~ 79 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGS--LVM 79 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTC--HHH
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCC--hHh
Confidence 6999999999999999999999999999999874432211 1111 111222211 000
Q ss_pred hccCCeEEEecCCCccccCCCccccCHHHHHHHHHHHHHh-CCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECC
Q 014377 68 TTWSGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCIT-NGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDAT 146 (426)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~Ad 146 (426)
..-....+ +.. +-..+||..+.+.+.+.+.+ +++++++.+|+++. ++.||.|+
T Consensus 80 ~~aD~~~i--pAg-------~al~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~-----------------~~~vIiat 133 (443)
T 3g5s_A 80 EAADLARV--PAG-------GALAVDREEFSGYITERLTGHPLLEVVREEVREIP-----------------PGITVLAT 133 (443)
T ss_dssp HHHHHSEE--CCT-------TEEEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC-----------------SSSEEECC
T ss_pred hhhhhcCC--CCC-------ccccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc-----------------CCCEEEeC
Confidence 00001111 111 11249999999999999988 78888766666553 35788888
Q ss_pred CCCC
Q 014377 147 GFSR 150 (426)
Q Consensus 147 G~~s 150 (426)
|..+
T Consensus 134 G~~~ 137 (443)
T 3g5s_A 134 GPLT 137 (443)
T ss_dssp CTTC
T ss_pred CCCc
Confidence 8644
No 148
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.75 E-value=4.9e-09 Score=101.83 Aligned_cols=35 Identities=37% Similarity=0.599 Sum_probs=33.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.++||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 46899999999999999999999999999999974
No 149
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.75 E-value=8.5e-09 Score=99.98 Aligned_cols=133 Identities=20% Similarity=0.207 Sum_probs=72.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-CcccchhHH--HhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP-NNYGVWVDE--FEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~-~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
++||+||||||||+++|..|++.|++|+|||+++..+-. ...|+.... +....+.+.+.. ....+.... ..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~--~~~g~~~~~---~~- 74 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK--GLLGAKVKG---VE- 74 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH--CCTTEEECC---EE-
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh--hcCCcccCC---Cc-
Confidence 379999999999999999999999999999998643200 011111110 111111111111 110011110 00
Q ss_pred CCCccc-cC-H----HHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 86 DRPYGR-VN-R----KLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 86 ~~~~~~-v~-r----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.++.. +. + ..+...+.+.+.+.|++++..++.. .+++.+.|.+ +|.++.+|.||.|+|..+.
T Consensus 75 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~--i~~~~~~v~~-~g~~~~~d~lviAtG~~p~ 142 (455)
T 2yqu_A 75 -LDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF--LSERKVLVEE-TGEELEARYILIATGSAPL 142 (455)
T ss_dssp -ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE--SSSSEEEETT-TCCEEEEEEEEECCCEEEC
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE--ecCCeEEEee-CCEEEEecEEEECCCCCCC
Confidence 01111 11 1 1233334455556789988333322 2445566655 6788999999999998654
No 150
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.75 E-value=9.6e-09 Score=100.80 Aligned_cols=138 Identities=21% Similarity=0.196 Sum_probs=75.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHC---CCcEEEEcCCCCCCCCCcccchhHH--HhhcCchhhhhh-ccCCeEEEecCCCc
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEA---GLSVCSIDPSPKLIWPNNYGVWVDE--FEAMDLLDCLDT-TWSGAVVHIDDNTK 82 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~---G~~V~liE~~~~~~~~~~~g~~~~~--l~~~~~~~~~~~-~~~~~~~~~~~~~~ 82 (426)
++||+|||||++|+++|..|++. |++|+|||+.+..+....+|+.... +........+.. ...+...+...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~--- 78 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDD--- 78 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC--------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCC---
Confidence 48999999999999999999999 9999999998621100111221110 110000000000 00000000000
Q ss_pred cccCCCcccc-CH-----HHHHHHHHHHHHhCCcEEEEEEEEEEEEe----CCeEEEEEcCCc--EEEcCEEEECCCCCC
Q 014377 83 KDLDRPYGRV-NR-----KLLKSKMLQKCITNGVKFHQAKVIKVIHE----ESKSLLICNDGV--TIQAAVVLDATGFSR 150 (426)
Q Consensus 83 ~~~~~~~~~v-~r-----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~----~~~~~v~~~~g~--~i~a~~vV~AdG~~s 150 (426)
....+..+ .+ ..+...+.+.+.+.|++++..+++.+... ++.+.|.+.+|+ ++.+|.||.|+|...
T Consensus 79 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 79 --AKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp ---CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred --CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 00011111 11 12444455666678999883346555431 145677777776 799999999999765
Q ss_pred c
Q 014377 151 C 151 (426)
Q Consensus 151 ~ 151 (426)
.
T Consensus 157 ~ 157 (499)
T 1xdi_A 157 R 157 (499)
T ss_dssp C
T ss_pred C
Confidence 4
No 151
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.74 E-value=1.8e-08 Score=97.83 Aligned_cols=34 Identities=32% Similarity=0.616 Sum_probs=32.8
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
++||+||||||||+++|..|++.|.+|+|||+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6999999999999999999999999999999976
No 152
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.73 E-value=2.5e-08 Score=95.21 Aligned_cols=108 Identities=14% Similarity=0.188 Sum_probs=71.4
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKD 84 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
+..+||+|||||++|+++|..|++.|. +|+|||+.+...+.+. . +... .+..... ..
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~-~~~~--------~~~~~~~-----------~~ 63 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRP-P-LSKD--------FMAHGDA-----------EK 63 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSG-G-GGTH--------HHHHCCG-----------GG
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCC-C-CCHH--------HhCCCch-----------hh
Confidence 456899999999999999999999998 4999999875332110 0 0000 0000000 00
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 85 LDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 85 ~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
. .+. .+.+.|++++ +++|+++..+.. .|.+.+|+++.+|.||.|+|..+..
T Consensus 64 ~-----~~~----------~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~~~~ 115 (408)
T 2gqw_A 64 I-----RLD----------CKRAPEVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGAAPRA 115 (408)
T ss_dssp S-----BCC----------CTTSCSCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred h-----hHH----------HHHHCCCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCCC
Confidence 0 011 2234689988 778988876543 5667788899999999999986543
No 153
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.73 E-value=4.5e-08 Score=94.13 Aligned_cols=56 Identities=13% Similarity=0.143 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 96 LLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 96 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.+.+.|.+.+.+.|++++ +++|+++..+++++.+...+|++++||.||.|.|.++.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 566667777777788888 99999999888877655568889999999999998864
No 154
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.73 E-value=8.9e-08 Score=92.96 Aligned_cols=98 Identities=20% Similarity=0.298 Sum_probs=78.6
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+... +.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~----------------------------------------- 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-PQ----------------------------------------- 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TT-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-cc-----------------------------------------
Confidence 579999999999999999999999999999976421 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEc-C--Cc--EEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICN-D--GV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~-~--g~--~i~a~~vV~AdG~~s~~ 152 (426)
....+.+.+.+.+.+.|++++ +++|++++.+++++.+++. + |+ ++.+|.||.|+|..+..
T Consensus 208 ---~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 208 ---GDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ---SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred ---cCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 012344556667777899999 9999999988777777776 6 76 89999999999987654
No 155
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.72 E-value=1.4e-08 Score=98.24 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=33.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
+.++||+|||||++|+++|..|++.|.+|+|||+++
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 356999999999999999999999999999999974
No 156
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.72 E-value=3e-08 Score=95.90 Aligned_cols=107 Identities=20% Similarity=0.234 Sum_probs=67.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
++||+|||||+||+++|..|++. |.+|+|||+.+...+.. ++ +...+ . ..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~-~~----------~p~~~----~-------~~------ 54 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP-CG----------IPYVV----E-------GL------ 54 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC-cC----------Ccccc----C-------CC------
Confidence 47999999999999999999997 88999999987432110 10 00000 0 00
Q ss_pred CCccccCHHHHHHHHHHHH-HhCCcEEE-EEEEEEEEEeCCeEEEEEcCC-cEEEcCEEEECCCCCC
Q 014377 87 RPYGRVNRKLLKSKMLQKC-ITNGVKFH-QAKVIKVIHEESKSLLICNDG-VTIQAAVVLDATGFSR 150 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~-~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g-~~i~a~~vV~AdG~~s 150 (426)
.+...+.....+.. .+.|++++ +++|+++.. +...|.+.++ .++.+|.||.|+|...
T Consensus 55 -----~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~--~~~~v~~~~g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 55 -----STPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDT--GYVRVRENGGEKSYEWDYLVFANGASP 114 (449)
T ss_dssp ----------------CTHHHHTTCEEETTCEEEEECS--SEEEEECSSSEEEEECSEEEECCCEEE
T ss_pred -----CCHHHhhhcCHHHHHHhcCcEEEecCEEEEEec--CCCEEEECCceEEEEcCEEEECCCCCC
Confidence 00011111111222 45799999 889988854 3456777777 4899999999999654
No 157
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.72 E-value=1e-08 Score=99.09 Aligned_cols=110 Identities=11% Similarity=0.125 Sum_probs=70.9
Q ss_pred CcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
+||+|||||+||+++|..|++. |.+|+|||+.+...+ ..|+. ...+..... . ...+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-~~~~~----------~~~~~~~~~-------~--~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF-LSAGM----------QLYLEGKVK-------D--VNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB-CGGGH----------HHHHTTSSC-------C--GGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc-ccccc----------hhhhcCccC-------C--HHHhhc
Confidence 3899999999999999999997 999999999875332 11111 000000000 0 000000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE-cCCc--EEEcCEEEECCCCCCc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC-NDGV--TIQAAVVLDATGFSRC 151 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vV~AdG~~s~ 151 (426)
. +.+.+.+.|++++ +++|+++..+++.+.+.. .+|+ ++.+|.||.|+|..+.
T Consensus 61 ~------------~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 61 M------------TGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPF 116 (447)
T ss_dssp C------------CHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred C------------CHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcC
Confidence 0 0122334689997 899999987777666655 3454 4899999999997653
No 158
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.71 E-value=6.8e-08 Score=93.58 Aligned_cols=98 Identities=21% Similarity=0.290 Sum_probs=79.5
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||++|+.+|..|++.|.+|+++|+.+... +. .
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-~~-------------~--------------------------- 206 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-PT-------------M--------------------------- 206 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-TT-------------S---------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-cc-------------c---------------------------
Confidence 579999999999999999999999999999976421 00 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+.+.|++++ +++|++++.+++++.+++.+|+++.+|.||.|+|..+..
T Consensus 207 ----~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 207 ----DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ----CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ----CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 01344455666667899999 999999998888888888888899999999999987654
No 159
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.71 E-value=1.1e-08 Score=96.80 Aligned_cols=109 Identities=12% Similarity=0.100 Sum_probs=68.3
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCC--CcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccc
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAG--LSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKD 84 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
+.++||+|||||+||+++|..|++.| .+|+|+|+++...+.+. .+.. ... ..
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~------~l~~---------~~~-------~~---- 55 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKP------MLST---------GFS-------KN---- 55 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGG------GGGG---------TTT-------TT----
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcc------cccH---------HHh-------CC----
Confidence 34689999999999999999999998 56899998753211110 0000 000 00
Q ss_pred cCCCccccCHHHHHH-HHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 85 LDRPYGRVNRKLLKS-KMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 85 ~~~~~~~v~r~~l~~-~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.....+.. .+.+.+.+.|++++ +++|+.+..++.. |.+. +.++.+|.||.|+|..+.
T Consensus 56 -------~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~--v~~~-~~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 56 -------KDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQR--IWIG-EEEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp -------CCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGTE--EEET-TEEEECSEEEECCCEEEC
T ss_pred -------CCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCCE--EEEC-CcEEECCEEEEeCCCCcC
Confidence 01111111 12233345789988 8888888765443 4444 457999999999997654
No 160
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.69 E-value=1.4e-07 Score=92.78 Aligned_cols=59 Identities=20% Similarity=0.093 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCccc
Q 014377 95 KLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLV 153 (426)
Q Consensus 95 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~r 153 (426)
..+.+.+.+.+++.|++++ +..+.+++..++.+.|.+.++.++.+|.|+.|.|..+.+-
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 4566677788888999999 8999999999999999999999999999999999876553
No 161
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.69 E-value=6.1e-09 Score=101.92 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=33.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.+|||+||||||||+++|..|++.|++|+|||+++
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35999999999999999999999999999999975
No 162
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.68 E-value=3.8e-08 Score=92.45 Aligned_cols=105 Identities=19% Similarity=0.277 Sum_probs=67.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
-.||+||||||||+++|..|++.| +|+|||+.+...+.+. .+... +. +. .....+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~--~l~~~---------~~----g~------~~~~~~~~- 64 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKP--MLSHY---------IA----GF------IPRNRLFP- 64 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCST--THHHH---------HT----TS------SCGGGGCS-
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccc--hhHHH---------Hh----CC------CCHHHhcc-
Confidence 469999999999999999999999 9999999875432111 11000 00 00 00000000
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
. ..+.+.+.|++++ +++|+.++.+.. .|+ .+|+++.+|.||.|+|...
T Consensus 65 ----~-------~~~~~~~~~v~~~~g~~v~~id~~~~--~V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 65 ----Y-------SLDWYRKRGIEIRLAEEAKLIDRGRK--VVI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp ----S-------CHHHHHHHTEEEECSCCEEEEETTTT--EEE-ESSCEEECSEEEECCCEEE
T ss_pred ----C-------CHHHHHhCCcEEEECCEEEEEECCCC--EEE-ECCcEEECCEEEECCCCCC
Confidence 0 0112234689988 778888875543 444 6778899999999999754
No 163
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.68 E-value=1.1e-07 Score=97.35 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=37.6
Q ss_pred CCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCC
Q 014377 108 NGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFS 149 (426)
Q Consensus 108 ~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~ 149 (426)
.|++++ +++|++|+.+++++.|++.+|++++||.||.|....
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 478888 999999999888899999999999999999999653
No 164
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.68 E-value=1.1e-08 Score=100.08 Aligned_cols=138 Identities=21% Similarity=0.196 Sum_probs=73.6
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCC--Ccc-cchhH------H-H-hhcCchhhhhhccCCeEE
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP--NNY-GVWVD------E-F-EAMDLLDCLDTTWSGAVV 75 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~--~~~-g~~~~------~-l-~~~~~~~~~~~~~~~~~~ 75 (426)
..+|||+||||||||+++|..|++.|.+|+|||+.+...+. ... |.|.. . + ........+... ....+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~-~~~g~ 82 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDA-HHYGW 82 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHH-HHTTC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHH-HhcCc
Confidence 35699999999999999999999999999999984322111 111 22211 1 0 000000111000 00000
Q ss_pred EecCCCccccCCCcccc-C-H----HHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCC
Q 014377 76 HIDDNTKKDLDRPYGRV-N-R----KLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATG 147 (426)
Q Consensus 76 ~~~~~~~~~~~~~~~~v-~-r----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG 147 (426)
.... .....+..+ . . ..+...+...+...+++++..++..+ +.+.+.|...+| .++.+|.||.|+|
T Consensus 83 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~--~~~~v~v~~~~g~~~~~~~d~lViATG 156 (488)
T 3dgz_A 83 EVAQ----PVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFV--DEHTVRGVDKGGKATLLSAEHIVIATG 156 (488)
T ss_dssp CCCS----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEES--SSSEEEEECTTSCEEEEEEEEEEECCC
T ss_pred ccCC----cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc--cCCeEEEEeCCCceEEEECCEEEEcCC
Confidence 0000 000111111 0 0 12222334445567999884444332 345677777777 5799999999999
Q ss_pred CCCc
Q 014377 148 FSRC 151 (426)
Q Consensus 148 ~~s~ 151 (426)
....
T Consensus 157 s~p~ 160 (488)
T 3dgz_A 157 GRPR 160 (488)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 7543
No 165
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.67 E-value=8.6e-08 Score=91.51 Aligned_cols=107 Identities=19% Similarity=0.276 Sum_probs=71.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCc--EEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLS--VCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~--V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
.+|+|||||+||+++|..|++.|.+ |+|||+.+...+.+.. +.. ..+...... ..+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~------l~~----~~~~g~~~~----------~~~~~ 62 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPS------LSK----AVLDGSLER----------PPILA 62 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGG------GGT----HHHHTSSSS----------CCBSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCcc------ccH----HHhCCCCCH----------HHhcC
Confidence 4899999999999999999999988 9999998764332210 000 000000000 00000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
+ .+...+.|++++ +++|+.+..+.. .|.+.+|+++.+|.||.|+|....
T Consensus 63 ~-------------~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~p~ 112 (410)
T 3ef6_A 63 E-------------ADWYGEARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSRAR 112 (410)
T ss_dssp C-------------TTHHHHTTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEEC
T ss_pred C-------------HHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCccc
Confidence 0 111234689998 779998876544 567788889999999999997643
No 166
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.65 E-value=4.5e-08 Score=95.73 Aligned_cols=131 Identities=24% Similarity=0.296 Sum_probs=75.5
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHH-hhcC--chhhh-hhccCCeEEEecC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEF-EAMD--LLDCL-DTTWSGAVVHIDD 79 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l-~~~~--~~~~~-~~~~~~~~~~~~~ 79 (426)
++..+||+|||||+||+++|..|++. |.+|+|||+.+...+.+.. ....+ .... ..+.. ...|+.......
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~--lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~- 84 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPP--LSKELWFSDDPNVTKTLRFKQWNGKERSIY- 84 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGG--GGTGGGCC--CTHHHHCEEECTTSCEEESB-
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCC--CCHHhhcCCccchhhccccccccccccccc-
Confidence 45679999999999999999998876 8999999998754332210 00000 0000 00000 001111110000
Q ss_pred CCccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 80 NTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 80 ~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
+.....+.+...+. .+.+.|++++ +++|+++..++. +|.+.+|+++.+|.||.|+|..+.
T Consensus 85 -----~~~~~~~~~~~~l~-----~~~~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 85 -----FQPPSFYVSAQDLP-----HIENGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTPR 145 (493)
T ss_dssp -----SSCGGGSBCTTTTT-----TSTTCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEEC
T ss_pred -----ccchHhhcchhhhh-----hhhcCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCC
Confidence 00000011111111 1234689988 789998876554 567788989999999999997543
No 167
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.65 E-value=2.5e-08 Score=99.45 Aligned_cols=111 Identities=12% Similarity=0.132 Sum_probs=71.7
Q ss_pred CcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
.||+||||||||+++|..|++. |.+|+|||+.+...+.. ++. ...+..... .....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~-~~l----------~~~~~~~~~---------~~~~~-- 59 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFAN-CGL----------PYHISGEIA---------QRSAL-- 59 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCG-GGH----------HHHHTSSSC---------CGGGG--
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccc-cCc----------hHHhcCCcC---------ChHHh--
Confidence 4899999999999999999998 89999999997643211 111 000000000 00000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE-cCC--cEEEcCEEEECCCCCCc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC-NDG--VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g--~~i~a~~vV~AdG~~s~ 151 (426)
... .+...+...|++++ +++|+++..+++.+.+.. .+| .++.+|.||.|+|....
T Consensus 60 ---~~~------~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 118 (565)
T 3ntd_A 60 ---VLQ------TPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPI 118 (565)
T ss_dssp ---BCC------CHHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred ---hcc------CHHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCC
Confidence 000 01111223589998 999999988777777664 234 37999999999998543
No 168
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.65 E-value=4.1e-08 Score=96.00 Aligned_cols=110 Identities=24% Similarity=0.271 Sum_probs=75.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
..+||+|||||++|+++|..|++. ++|+|||+++..+. .+... ... .+ . .
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG-----~~~~~---------------~~~-~~-g-------~ 156 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGG-----DMWLK---------------GIK-QE-G-------F 156 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSC-----SGGGT---------------CSE-ET-T-------T
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCC-----eeecc---------------ccc-cC-C-------C
Confidence 457999999999999999999999 99999999875421 11000 000 00 0 0
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE-cCCc--EEEcCEEEECCCCCCc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC-NDGV--TIQAAVVLDATGFSRC 151 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vV~AdG~~s~ 151 (426)
+. +...+...+.+.+ +.|++++ +++|.++..+++.+.+.. .+++ ++.+|.||.|+|....
T Consensus 157 ~~---~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 157 NK---DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS 220 (493)
T ss_dssp TE---EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC
T ss_pred CC---CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc
Confidence 11 2334444555544 5789988 899999887766665543 4453 6899999999997654
No 169
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.64 E-value=7.6e-09 Score=99.47 Aligned_cols=103 Identities=18% Similarity=0.240 Sum_probs=67.7
Q ss_pred cEEEECchHHHHHHHHHHHHCC--CcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAG--LSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.|+|||||+||+++|..|++.+ .+|+|||+++...+. ..+..... +. .. ...+..+
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~---p~l~~v~~--g~-------~~----------~~~i~~~ 61 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT---PAFPHLAM--GW-------RK----------FEDISVP 61 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG---GGHHHHHH--TC-------SC----------GGGSEEE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccC---ccHHHHhc--CC-------CC----------HHHhhhc
Confidence 6999999999999999999865 899999998642221 11100000 00 00 0000001
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCC
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFS 149 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~ 149 (426)
+ .+.+.+.|++++..+|++++.+.. +|++++|+++.+|+||.|+|..
T Consensus 62 ~------------~~~~~~~gv~~i~~~v~~Id~~~~--~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 62 L------------APLLPKFNIEFINEKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp S------------TTTGGGGTEEEECSCEEEEETTTT--EEEETTCCEEECSEEEECCCCE
T ss_pred H------------HHHHHHCCcEEEEeEEEEEECCCC--EEEECCCCEEECCEEEEeCCCC
Confidence 1 011234689988668988886655 5778899999999999999975
No 170
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.63 E-value=2.1e-08 Score=98.08 Aligned_cols=33 Identities=30% Similarity=0.429 Sum_probs=31.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHH-CCCcEEEEcC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSE-AGLSVCSIDP 40 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~-~G~~V~liE~ 40 (426)
.++||+||||||+|+++|+.|++ .|.+|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 35899999999999999999999 9999999993
No 171
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.63 E-value=7.4e-08 Score=94.95 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=35.5
Q ss_pred CCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 5 SKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 5 ~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
.++.++||+|||||++|+++|..|++.|.+|+|||+++.
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 355679999999999999999999999999999999864
No 172
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.62 E-value=2e-08 Score=98.44 Aligned_cols=34 Identities=35% Similarity=0.619 Sum_probs=32.4
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
++||+||||||+|+++|..|++.|.+|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999985
No 173
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.62 E-value=4.3e-08 Score=93.43 Aligned_cols=107 Identities=16% Similarity=0.242 Sum_probs=70.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
.||+|||||+||+++|..|++.|. +|+|||+.+...+.+. .+.. ..+ .+ ......
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~------~l~~----~~l----~~------~~~~~~--- 58 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP------PLSK----AYL----KS------GGDPNS--- 58 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG------GGGT----GGG----GS------CCCTTS---
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc------cCCH----HHH----CC------CCCHHH---
Confidence 589999999999999999999999 8999999875433221 0000 000 00 000000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
+ ... ..+...+.+++++.++|+++..+.. .|.+.+|+++.+|.||.|+|...
T Consensus 59 -~-~~~-------~~~~~~~~~i~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 59 -L-MFR-------PEKFFQDQAIELISDRMVSIDREGR--KLLLASGTAIEYGHLVLATGARN 110 (404)
T ss_dssp -S-BSS-------CHHHHHHTTEEEECCCEEEEETTTT--EEEESSSCEEECSEEEECCCEEE
T ss_pred -c-cCC-------CHHHHHhCCCEEEEEEEEEEECCCC--EEEECCCCEEECCEEEEeeCCCc
Confidence 0 011 0122335788877777888876544 56778888999999999999743
No 174
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.61 E-value=1.6e-07 Score=90.74 Aligned_cols=98 Identities=16% Similarity=0.211 Sum_probs=77.5
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+|+|+.+.... . +
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~------------~--------------------------- 206 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP--S------------F--------------------------- 206 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--T------------S---------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh--h------------h---------------------------
Confidence 4799999999999999999999999999998763210 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe-EEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK-SLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
+ ..+.+.+.+.+++.|++++ +++|++++.++++ +.|++.+|+++.+|.||.|+|..+..
T Consensus 207 ---~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 207 ---D-PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp ---C-HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred ---h-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 0 0144455666667899999 8999999876544 78888899899999999999987643
No 175
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.60 E-value=1.3e-07 Score=90.07 Aligned_cols=104 Identities=17% Similarity=0.246 Sum_probs=68.4
Q ss_pred cEEEECchHHHHHHHHHHHHCC--CcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAG--LSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.|+|||||+||+++|..|++.+ .+|+|||+++... .+..+...+. +. .+ ...+..+
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~---~~p~~~~v~~--g~-------~~----------~~~~~~~ 61 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYY---TCYMSNEVIG--GD-------RE----------LASLRVG 61 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEE---CSTTHHHHHH--TS-------SC----------GGGGEEC
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCC---CccCHHHHhc--CC-------CC----------HHHHhhC
Confidence 5999999999999999998865 6899999986421 1222211110 00 00 0001011
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
+ +.+...|++++..+|++++.+.. .|++.+|.++.+|.||.|+|....
T Consensus 62 ~-------------~~~~~~gv~~i~~~v~~id~~~~--~v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 62 Y-------------DGLRAHGIQVVHDSALGIDPDKK--LVKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp S-------------HHHHHTTCEEECSCEEEEETTTT--EEEETTSCEEECSEEEECCCEEEC
T ss_pred H-------------HHHHHCCCEEEEeEEEEEEccCc--EEEecccceeecceeeeccCCccc
Confidence 1 11234689988778888876554 567889999999999999997643
No 176
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.59 E-value=4.4e-08 Score=95.82 Aligned_cols=116 Identities=12% Similarity=0.204 Sum_probs=73.3
Q ss_pred CCCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcc
Q 014377 4 PSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKK 83 (426)
Q Consensus 4 ~~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
|...++..|||||||+||+.+|..|++.+++|+|||+++... |...|.+. . .+ .+ ...
T Consensus 37 p~~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~-------~~PlL~~v-----a----~G-~l-----~~~ 94 (502)
T 4g6h_A 37 PQHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFL-------FTPLLPSA-----P----VG-TV-----DEK 94 (502)
T ss_dssp CCSCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEE-------CGGGGGGT-----T----TT-SS-----CGG
T ss_pred CCCCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcc-------cccchhHH-----h----hc-cc-----cHH
Confidence 334456789999999999999999999999999999986321 11111110 0 00 00 000
Q ss_pred ccCCCccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEE------------------cCCcEEEcCEEEEC
Q 014377 84 DLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLIC------------------NDGVTIQAAVVLDA 145 (426)
Q Consensus 84 ~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~------------------~~g~~i~a~~vV~A 145 (426)
.+. .+ +...+ .....+++++..+|++|+.+...+.+.. .++.++.+|++|.|
T Consensus 95 ~i~-----~p---~~~~~--~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViA 164 (502)
T 4g6h_A 95 SII-----EP---IVNFA--LKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISA 164 (502)
T ss_dssp GGE-----EE---HHHHH--TTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEEC
T ss_pred Hhh-----hh---HHHHH--HhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEc
Confidence 000 01 11111 1123578887888999988777666543 34678999999999
Q ss_pred CCCCCc
Q 014377 146 TGFSRC 151 (426)
Q Consensus 146 dG~~s~ 151 (426)
+|..+.
T Consensus 165 tGs~~~ 170 (502)
T 4g6h_A 165 VGAEPN 170 (502)
T ss_dssp CCCEEC
T ss_pred CCcccc
Confidence 998654
No 177
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.57 E-value=1.7e-08 Score=98.79 Aligned_cols=35 Identities=29% Similarity=0.461 Sum_probs=32.3
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHH-CCCcEEEEcC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSE-AGLSVCSIDP 40 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~-~G~~V~liE~ 40 (426)
|..++||+||||||+|+++|..|++ .|++|+|||+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 4457999999999999999999999 9999999994
No 178
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.55 E-value=4.3e-07 Score=88.50 Aligned_cols=98 Identities=20% Similarity=0.312 Sum_probs=77.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+... + .. +
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~-~~------------~-------------------------- 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG-A-SM------------D-------------------------- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-S-SS------------C--------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc-c-cc------------C--------------------------
Confidence 579999999999999999999999999999986421 0 00 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEE--eCCeEEEEEc-----CCcEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIH--EESKSLLICN-----DGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~--~~~~~~v~~~-----~g~~i~a~~vV~AdG~~s~~ 152 (426)
..+.+.+.+.+++.|++++ +++|++++. +++.+.+.+. +++++.+|.||.|.|..+..
T Consensus 224 -----~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 224 -----GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp -----HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred -----HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 3455566777778999999 999999987 5556667665 45689999999999976543
No 179
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.55 E-value=3.6e-07 Score=88.48 Aligned_cols=98 Identities=19% Similarity=0.267 Sum_probs=76.8
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+... + .
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~-~--------------------------------------- 208 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-S-G--------------------------------------- 208 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-T-T---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-c-c---------------------------------------
Confidence 3579999999999999999999999999999976421 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEc---CCcEEEcCEEEECCCCCCc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICN---DGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~---~g~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+.+.|++++ +++|++++.+++++.+++. +++++.+|.||.|.|..+.
T Consensus 209 ---~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 209 ---F-EKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp ---S-CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred ---c-CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 0 01344556666777899999 8999999987777777664 4568999999999997654
No 180
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.55 E-value=3.7e-07 Score=88.50 Aligned_cols=98 Identities=19% Similarity=0.331 Sum_probs=78.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||..|+-+|..|++.|.+|+++|+.+.... . +
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~--~------------~--------------------------- 205 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF--Q------------F--------------------------- 205 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--T------------S---------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc--c------------c---------------------------
Confidence 4799999999999999999999999999998763210 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCc-EEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGV-TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~-~i~a~~vV~AdG~~s~~ 152 (426)
+ ..+.+.+.+.+.+.|++++ +++|++++.+++++.|++.+|+ ++.+|.||.|+|..+..
T Consensus 206 ---~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 206 ---D-PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ---C-HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred ---C-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 0 0122345566677899999 9999999987777888899998 89999999999987644
No 181
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.53 E-value=2e-07 Score=94.93 Aligned_cols=38 Identities=29% Similarity=0.462 Sum_probs=34.6
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
...+||+||||||||+++|..|+++|++|+|||+.+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999997644
No 182
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.52 E-value=5.5e-07 Score=85.77 Aligned_cols=98 Identities=20% Similarity=0.368 Sum_probs=78.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++|+.+... ++
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~-~~----------------------------------------- 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM-AR----------------------------------------- 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-TT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch-hh-----------------------------------------
Confidence 469999999999999999999999999999876321 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEEcCCcEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.....+.+.+.+.+++.|++++ +++|++++.+++++ .|++.+|+++.||.||.|.|..+.
T Consensus 181 --~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 181 --VVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp --TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred --ccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 0012355566777778999999 89999998876665 588999999999999999998654
No 183
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.51 E-value=3.5e-07 Score=88.39 Aligned_cols=99 Identities=19% Similarity=0.240 Sum_probs=75.7
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
...+|+|||||++|+.+|..|++.|.+|+++|+.+... ++.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~-------------------------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPL-GVY-------------------------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-TTT--------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccc-ccc--------------------------------------
Confidence 35789999999999999999999999999999976421 000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+.+.|++++ +++|++++.++....+.+ +++++.+|.||.|+|..+.
T Consensus 189 ----~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 189 ----L-DKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp ----C-CHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred ----C-CHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 0 02355667777778999999 889999986532224555 5678999999999997664
No 184
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.51 E-value=1e-06 Score=85.77 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=37.5
Q ss_pred CcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 109 GVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 109 gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
|++++ +++|++|+.++++++|++.+|++++||.||.|.+...
T Consensus 228 ~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp CTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHH
T ss_pred ccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHH
Confidence 56788 9999999998888999999999999999999998754
No 185
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=1.9e-07 Score=90.53 Aligned_cols=34 Identities=24% Similarity=0.590 Sum_probs=32.2
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPS 41 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~ 41 (426)
.++||+||||||||+++|..|++.|.+|+|||+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4689999999999999999999999999999994
No 186
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.49 E-value=5.8e-07 Score=87.72 Aligned_cols=99 Identities=22% Similarity=0.299 Sum_probs=80.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||||+.|+-+|..|++.|.+|+++++.+.... ..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~--~~-------------------------------------- 230 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR--NF-------------------------------------- 230 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--TS--------------------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc--cc--------------------------------------
Confidence 34799999999999999999999999999998763210 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
+ ..+.+.+.+.+++.|++++ +++|++++.+++++.|.+.+|+++.+|.||.|.|..+..
T Consensus 231 ----~-~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 231 ----D-YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp ----C-HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred ----C-HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 0 2244456667777899999 899999998877888999999999999999999986543
No 187
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.49 E-value=2.5e-07 Score=88.25 Aligned_cols=99 Identities=22% Similarity=0.295 Sum_probs=78.4
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||||+.|+-+|..|++.|.+|+++|+.+... + ..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-~-------~~-------------------------------- 182 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-V-------RV-------------------------------- 182 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-H-------HH--------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-h-------hh--------------------------------
Confidence 3579999999999999999999999999999876421 0 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
+ ...+.+.+.+.+++.|++++ +++|++++.++....|++.||+++.||.||.|.|..+.
T Consensus 183 ---~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 183 ---L-GRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp ---H-CHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred ---c-CHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 0 12344556666677899999 99999998766555788999999999999999998764
No 188
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.48 E-value=1.2e-07 Score=91.71 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhCCcEEE-EEEEEEEEEe--CCeE-EEEEcCCcEEEcCEEEECCCCCCc
Q 014377 96 LLKSKMLQKCITNGVKFH-QAKVIKVIHE--ESKS-LLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 96 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~--~~~~-~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.+.+.|.+.+.+.|++++ +++|+++..+ ++++ .|.+ +|+++.||.||.|.|.++.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 466667777777899999 9999999987 6665 4544 6888999999999998864
No 189
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.47 E-value=1e-07 Score=88.10 Aligned_cols=39 Identities=33% Similarity=0.504 Sum_probs=34.3
Q ss_pred CcCcEEEECchHHHHHHHHHHHH--CCCcEEEEcCCCCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSE--AGLSVCSIDPSPKLIW 46 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~--~G~~V~liE~~~~~~~ 46 (426)
.++||+||||||||+++|+.|++ .|++|+|||+++.++.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG 104 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCc
Confidence 46899999999999999999985 5999999999876643
No 190
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.47 E-value=2.3e-07 Score=93.03 Aligned_cols=35 Identities=31% Similarity=0.528 Sum_probs=32.4
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPS 41 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~ 41 (426)
...+||+||||||||+++|..|++.|++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34689999999999999999999999999999984
No 191
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.44 E-value=6.6e-07 Score=94.30 Aligned_cols=111 Identities=24% Similarity=0.284 Sum_probs=71.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
..+||+||||||||+++|..|++.|++|+|||+.+..+ |.+.. . +... ...
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~G-----G~~~~----~----------~k~~--i~~-------- 177 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAG-----GTLLD----T----------AGEQ--IDG-------- 177 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS-----GGGGG----S----------SCCE--ETT--------
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC-----ceecc----C----------Cccc--cCC--------
Confidence 35899999999999999999999999999999986432 22210 0 0000 000
Q ss_pred CccccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCeEEE---------EE------cCCcEEEcCEEEECCCCCC
Q 014377 88 PYGRVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESKSLL---------IC------NDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~~v---------~~------~~g~~i~a~~vV~AdG~~s 150 (426)
.....+...+.+.+.+ .+++++ +++|.++...+....+ .. .++.++.+|.||.|+|...
T Consensus 178 ----~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 178 ----MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp ----EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEE
T ss_pred ----CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCcc
Confidence 0122344455555556 599999 8899887643211111 11 1123789999999999864
Q ss_pred c
Q 014377 151 C 151 (426)
Q Consensus 151 ~ 151 (426)
.
T Consensus 254 ~ 254 (965)
T 2gag_A 254 R 254 (965)
T ss_dssp C
T ss_pred C
Confidence 3
No 192
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.43 E-value=1.4e-06 Score=84.85 Aligned_cols=98 Identities=15% Similarity=0.193 Sum_probs=76.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+... ++.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~---------------------------------------- 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG-GVG---------------------------------------- 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-CSS----------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC-Ccc----------------------------------------
Confidence 479999999999999999999999999999976421 100
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe-EEEEE-----cCCcEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK-SLLIC-----NDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~-----~~g~~i~a~~vV~AdG~~s~ 151 (426)
+ ...+.+.+.+.+++.|++++ +++|++++.++++ +.+++ .+++++.+|.||.|.|..+.
T Consensus 218 --~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 218 --I-DMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp --C-CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEEC
T ss_pred --c-CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcC
Confidence 0 11234456666777899999 9999999887665 66664 46678999999999997654
No 193
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.43 E-value=1.1e-06 Score=86.54 Aligned_cols=98 Identities=13% Similarity=0.177 Sum_probs=78.4
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||..|+-+|..|++.|.+|+++|+.+... +.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-~~----------------------------------------- 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-LI----------------------------------------- 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-TC-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-cc-----------------------------------------
Confidence 579999999999999999999999999999976321 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe----EEEEEcCCc-EEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK----SLLICNDGV-TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~----~~v~~~~g~-~i~a~~vV~AdG~~s~~ 152 (426)
. ...+.+.|.+.+++.|++++ +++|++++.++++ +.|++.+|+ ++.||.||.|.|..+..
T Consensus 253 --~-~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 253 --K-DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp --C-SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred --c-cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 0 01234556677778999999 9999999876554 678888887 89999999999987654
No 194
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.43 E-value=8.6e-07 Score=85.09 Aligned_cols=99 Identities=22% Similarity=0.357 Sum_probs=76.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||||+.|+-+|..|++.|.+|+++|+.+.+. ++.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-~~~--------------------------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL-ERV--------------------------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-TTT---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-cch---------------------------------------
Confidence 3579999999999999999999999999999875321 000
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEE--eCCeE-EEEEcCCcEEEcCEEEECCCCCCc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIH--EESKS-LLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~--~~~~~-~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+++.|++++ +++|++++. +++.+ .|.+.+|+++.||.||.|.|..+.
T Consensus 189 ---~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 189 ---T-APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp ---S-CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred ---h-hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 0 11234455666667899999 899999987 44444 688889999999999999997654
No 195
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.42 E-value=3.4e-07 Score=88.05 Aligned_cols=110 Identities=12% Similarity=0.154 Sum_probs=69.0
Q ss_pred cEEEECchHHHHHHHHHHHHCC--CcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAG--LSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.|+||||||||+++|..|++.| .+|+|||+++...+.+ |+. .. .+..... + ....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~-~~l--~~--------~~~~~~~-------~-~~~~---- 58 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFAN-CAL--PY--------VIGEVVE-------D-RRYA---- 58 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCG-GGH--HH--------HHTTSSC-------C-GGGT----
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCc-chh--HH--------HHcCCcc-------c-hhhh----
Confidence 6999999999999999999987 5799999987533211 111 10 0000000 0 0000
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcC---CcEEEcCEEEECCCCCCc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICND---GVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~---g~~i~a~~vV~AdG~~s~ 151 (426)
. ......+ ..+.|++++ +++|+++..+...+.+.... +.++.+|.||.|+|..+.
T Consensus 59 ~-~~~~~~~-------~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 59 L-AYTPEKF-------YDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp B-CCCHHHH-------HHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEEC
T ss_pred h-hcCHHHH-------HHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccc
Confidence 0 0112211 234589988 89999998777766665433 346889999999997643
No 196
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.41 E-value=1.1e-06 Score=85.50 Aligned_cols=99 Identities=26% Similarity=0.398 Sum_probs=80.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHC-CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEA-GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~-G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
.-+|+|||||+.|+-+|..|++. |.+|+++|+.+... ++.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l-~~~-------------------------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM-PGF-------------------------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS-TTT--------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc-ccc--------------------------------------
Confidence 35799999999999999999999 99999999875321 000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+.+.|++++ +++|++++.+++.+.+.+.+|+++.+|.||.|.|..+.
T Consensus 200 ----~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 200 ----T-SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp ----S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred ----c-CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 0 12355667777778999999 89999998877778888889999999999999998654
No 197
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.41 E-value=1.4e-06 Score=85.31 Aligned_cols=98 Identities=20% Similarity=0.286 Sum_probs=79.4
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.++|||||+.|+-+|..|++.|.+|+++|+.+... +. +
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~-------------~--------------------------- 221 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-PY-------------E--------------------------- 221 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-CC-------------S---------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-cc-------------c---------------------------
Confidence 579999999999999999999999999999876421 00 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+++.|++++ +++|++++.+++++.+.+.+|+++.+|.||.|.|..+..
T Consensus 222 ----d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 222 ----DADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp ----SHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred ----CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 01244556667778999999 999999998776788888889899999999999987643
No 198
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.40 E-value=1.5e-06 Score=84.48 Aligned_cols=98 Identities=20% Similarity=0.336 Sum_probs=75.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+... + . +
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~-~------------~--------------------------- 213 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-P-T------------L--------------------------- 213 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-T-T------------S---------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-c-c------------C---------------------------
Confidence 579999999999999999999999999999976421 0 0 0
Q ss_pred cccCHHHHHHHHHHHH-HhCCcEEE-EEEEEEEEEeCCeEEEEEc--CC--cEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKC-ITNGVKFH-QAKVIKVIHEESKSLLICN--DG--VTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~-~~~gv~~~-~~~v~~i~~~~~~~~v~~~--~g--~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+ .+.|++++ +++|++++.+++++.+.+. +| +++.+|.||.|.|..+..
T Consensus 214 ----d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 214 ----DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp ----CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred ----CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 022445566666 77899999 8999999887666777765 66 689999999999976543
No 199
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.39 E-value=2.6e-06 Score=83.31 Aligned_cols=98 Identities=23% Similarity=0.345 Sum_probs=77.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+.... . +
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~------------~--------------------------- 237 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG--G------------M--------------------------- 237 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS--S------------S---------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc--c------------C---------------------------
Confidence 4799999999999999999999999999998763210 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcC---C--cEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICND---G--VTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~---g--~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+.+.|++++ +++|++++.+++++.+.+.+ | +++.+|.||.|.|..+..
T Consensus 238 ----d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 238 ----DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp ----CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred ----CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 02344556666777899999 99999999888887777653 4 589999999999986543
No 200
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.39 E-value=9.7e-07 Score=86.08 Aligned_cols=99 Identities=17% Similarity=0.114 Sum_probs=78.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||||..|+-+|..|++.|.+|+|+|+.+.... . +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-~-------------~-------------------------- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-G-------------A-------------------------- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-T-------------S--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-c-------------c--------------------------
Confidence 35799999999999999999999999999998764210 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcC----CcEEEcCEEEECCCCCCcc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICND----GVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~----g~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+.+.|++++ +++|++++.+++++.|++.+ |+++.+|.||.|.|..+..
T Consensus 225 -----~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 225 -----DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp -----CHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred -----CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 01233455666677899999 99999999887777788776 7789999999999987643
No 201
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.39 E-value=1.4e-06 Score=83.01 Aligned_cols=95 Identities=24% Similarity=0.429 Sum_probs=74.4
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||||+.|+-+|..|++.|.+|+++|+.+... ++.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~--------------------------------------- 184 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLM-SRA--------------------------------------- 184 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-TTT---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-ccc---------------------------------------
Confidence 3579999999999999999999999999999976321 000
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
+ ...+.+.+.+.+++.|++++ +++|++++ ++ .|++.+|+++.||.||.|.|..+.
T Consensus 185 ---~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 185 ---A-PATLADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp ---S-CHHHHHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred ---c-CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCcc
Confidence 0 01234456666777899999 88999998 33 677889999999999999997654
No 202
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.38 E-value=1.3e-06 Score=85.21 Aligned_cols=98 Identities=17% Similarity=0.204 Sum_probs=78.1
Q ss_pred CcEEEECchHHHHHHHHHHHHC---CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA---GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~---G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
-.++|||||+.|+-+|..|++. |.+|+++|+.+... + . +
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-~-~------------~------------------------ 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-R-G------------F------------------------ 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-T-T------------S------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-c-c------------c------------------------
Confidence 4799999999999999999999 99999999986421 0 0 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCC-eEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEES-KSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+++.|++++ +++|++++.+++ .+.|++.+|+++.+|.||.|.|..+..
T Consensus 230 -------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 230 -------DSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp -------CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred -------CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 01244566677778999999 899999987654 478888899899999999999976543
No 203
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=1.2e-06 Score=85.18 Aligned_cols=97 Identities=24% Similarity=0.388 Sum_probs=75.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+... + .
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-~-~---------------------------------------- 215 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-P-T---------------------------------------- 215 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-T-T----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-c-c----------------------------------------
Confidence 579999999999999999999999999999986421 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEc---CC--cEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICN---DG--VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~---~g--~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+++.|++++ +++|++++.+++++.+.+. +| +++.+|.||.|.|..+.
T Consensus 216 --~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 216 --M-DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp --S-CHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred --c-cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 0 01344556666777899999 9999999876666666654 44 68999999999997654
No 204
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.35 E-value=1.4e-06 Score=84.83 Aligned_cols=98 Identities=16% Similarity=0.269 Sum_probs=75.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+... + . +
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~-~------------~--------------------------- 224 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-R-K------------F--------------------------- 224 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-T-T------------S---------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-c-c------------c---------------------------
Confidence 479999999999999999999999999999876421 0 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe--EEEEEcCC-cEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK--SLLICNDG-VTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~--~~v~~~~g-~~i~a~~vV~AdG~~s~~ 152 (426)
+ ..+.+.+.+.+++.|++++ +++|++++.++++ +.|++.+| +++.+|.||.|.|..+..
T Consensus 225 ---d-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 225 ---D-ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp ---C-HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred ---C-HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 0 1123345556666899999 9999999876544 77888888 789999999999976543
No 205
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.35 E-value=2.6e-06 Score=82.30 Aligned_cols=99 Identities=18% Similarity=0.278 Sum_probs=76.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||..|+-+|..|++.|.+|+++|+.+... ++.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~---------------------------------------- 188 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL-YKY---------------------------------------- 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT-TTT----------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh-hhh----------------------------------------
Confidence 479999999999999999999999999999876321 000
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
. ...+.+.+.+.+++.|++++ +++|++++.+++++.....+|+++.+|.||.|.|..+..
T Consensus 189 --~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 189 --F-DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp --S-CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred --h-hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCH
Confidence 0 01244556667778999999 899999987666665334478899999999999976543
No 206
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.34 E-value=3.2e-06 Score=82.10 Aligned_cols=96 Identities=19% Similarity=0.231 Sum_probs=77.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+... + .
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~--~--------------------------------------- 214 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-R--E--------------------------------------- 214 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-T--S---------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-C--C---------------------------------------
Confidence 479999999999999999999999999999876321 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+++.|++++ +++|++++.+++.+.|.+. +.++.+|.||.|.|..+..
T Consensus 215 ----~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 215 ----DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp ----CHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred ----CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 02345566777778999999 9999999887777777776 5689999999999987653
No 207
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.33 E-value=3.3e-06 Score=81.55 Aligned_cols=98 Identities=17% Similarity=0.242 Sum_probs=77.6
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.++|||||..|+-+|..|++.|.+|+++|+.+.... ..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~---------------------------------------- 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-KY---------------------------------------- 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-TT----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-cc----------------------------------------
Confidence 4699999999999999999999999999998764210 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
+ ...+.+.+.+.+++.|++++ +++|++++.+++++.|.+.++ ++.||.||.|.|..+..
T Consensus 187 --~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 187 --F-DKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp --C-CHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCC
T ss_pred --C-CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCCh
Confidence 0 12244566677777999999 899999997777777888777 89999999999986543
No 208
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=1.1e-06 Score=85.14 Aligned_cols=96 Identities=23% Similarity=0.298 Sum_probs=72.9
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+... + . +
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~-~------------~--------------------------- 210 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-P-T------------Y--------------------------- 210 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-T-T------------S---------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-c-c------------c---------------------------
Confidence 479999999999999999999999999999986421 0 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCCCcc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+.+.|++++ +++|++++. + .+.+...+| +++.+|.||.|+|..+..
T Consensus 211 ----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 211 ----DSELTAPVAESLKKLGIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp ----CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred ----CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 01233455566667899999 999999986 3 355554456 689999999999986643
No 209
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.32 E-value=2.6e-06 Score=82.95 Aligned_cols=97 Identities=21% Similarity=0.255 Sum_probs=73.8
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-+|+|||||++|+-+|..|++.|.+|+++|+.+.... . +
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------~--~-------------------------- 225 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT------------I--Y-------------------------- 225 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS------------S--S--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh------------c--C--------------------------
Confidence 45799999999999999999999999999998753210 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
...+.+.+.+.+.+.|++++ +++|++++.+++...+.+ ++.++.+|.||.|.|..+.
T Consensus 226 -----~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 226 -----DGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVET-DKGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp -----CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEE-TTEEEECSEEEECSCEEES
T ss_pred -----CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEE-CCCEEEcCEEEECcCCCcC
Confidence 02345566777778999999 899999986533234555 4568999999999997654
No 210
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.32 E-value=3.2e-06 Score=82.75 Aligned_cols=99 Identities=12% Similarity=0.189 Sum_probs=77.6
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||||+.|+-+|..|++.|.+|+++|+.+.+. + . +
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~-~------------~-------------------------- 215 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-R-K------------F-------------------------- 215 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-T-T------------S--------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-c-c------------c--------------------------
Confidence 3479999999999999999999999999999876421 0 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCC-eEEEEEcCCcE-EEcCEEEECCCCCCcc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEES-KSLLICNDGVT-IQAAVVLDATGFSRCL 152 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~-i~a~~vV~AdG~~s~~ 152 (426)
+ ..+.+.+.+.+++.|++++ +++|++++.+++ .+.|++.+|++ +.+|.||.|.|..+..
T Consensus 216 ----d-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 216 ----D-ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp ----C-HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred ----c-hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 0 1233445666677899999 999999987643 47788889987 9999999999987654
No 211
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.31 E-value=2.7e-06 Score=84.72 Aligned_cols=97 Identities=16% Similarity=0.255 Sum_probs=77.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+... + ..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~-~~--------------------------------------- 190 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-T-PV--------------------------------------- 190 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-T-TS---------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-h-hc---------------------------------------
Confidence 379999999999999999999999999999976321 0 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEE-------------------eCCeEEEEEcCCcEEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIH-------------------EESKSLLICNDGVTIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~-------------------~~~~~~v~~~~g~~i~a~~vV~AdG~~ 149 (426)
...+.+.+.+.+.+.|++++ +++|++++. +++++.+.+.+|+++.||.||.|.|..
T Consensus 191 ----~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 191 ----DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp ----CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEE
T ss_pred ----CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCc
Confidence 01234455666677899999 899999987 356778888899999999999999986
Q ss_pred Cc
Q 014377 150 RC 151 (426)
Q Consensus 150 s~ 151 (426)
+.
T Consensus 267 p~ 268 (565)
T 3ntd_A 267 PE 268 (565)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 212
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.30 E-value=5.1e-06 Score=76.18 Aligned_cols=94 Identities=20% Similarity=0.256 Sum_probs=72.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------- 182 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA------------------------------------------- 182 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------------------------------------------
Confidence 4799999999999999999999999999998753210
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEEcC----C--cEEEcCEEEECCCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLICND----G--VTIQAAVVLDATGFSR 150 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~----g--~~i~a~~vV~AdG~~s 150 (426)
...+.+.+.+.+.+.|++++ +++|++++.+++++ .|++.+ | .++.+|.||.|.|..+
T Consensus 183 ----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 183 ----EKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp ----CHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred ----CHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 01234455666777899999 99999998776443 355543 4 5799999999999643
No 213
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.29 E-value=3.3e-06 Score=82.49 Aligned_cols=98 Identities=22% Similarity=0.312 Sum_probs=76.4
Q ss_pred CcEEEECchHHHHHHHHHHHH----CCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSE----AGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~----~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
-.|+|||||+.|+-+|..|++ .|.+|+++++.+... .+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~-~~------------------------------------- 222 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM-GK------------------------------------- 222 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT-TT-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc-cc-------------------------------------
Confidence 479999999999999999886 488999998765210 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
.+ ...+.+.+.+.+.+.|++++ +++|++++.+++.+.|++.+|+++.||.||.|.|..+.
T Consensus 223 -----~l-~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 223 -----IL-PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp -----TS-CHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred -----cC-CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 00 02344456667777899999 89999998777777888999999999999999997654
No 214
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.29 E-value=2.9e-06 Score=82.93 Aligned_cols=98 Identities=17% Similarity=0.225 Sum_probs=77.4
Q ss_pred CcEEEECchHHHHHHHHHHHHC---CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA---GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~---G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
-.|+|||||..|+-+|..|++. |.+|+++|+.+... + . +
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-~-~------------~------------------------ 233 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-R-G------------F------------------------ 233 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-T-T------------S------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-c-c------------c------------------------
Confidence 4799999999999999999999 99999999876421 0 0 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCC-eEEEEEcCCcEEEcCEEEECCCCCCcc
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEES-KSLLICNDGVTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~i~a~~vV~AdG~~s~~ 152 (426)
+ ..+.+.+.+.+.+.|++++ +++|++++.+++ .+.|++.+|+++.+|.||.|.|..+..
T Consensus 234 ------d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 234 ------D-ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp ------C-HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ------C-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 0 1233455666677899999 899999987654 477888899899999999999976543
No 215
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.29 E-value=5.6e-07 Score=85.47 Aligned_cols=39 Identities=31% Similarity=0.457 Sum_probs=35.1
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHC-CCcEEEEcCCCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEA-GLSVCSIDPSPKL 44 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~-G~~V~liE~~~~~ 44 (426)
|..++||+|||||++|+++|+.|++. |.+|+|+|+++..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 44579999999999999999999998 9999999998654
No 216
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.29 E-value=5e-06 Score=81.19 Aligned_cols=98 Identities=27% Similarity=0.266 Sum_probs=75.8
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||||+.|+-+|..|++.|.+|+++|+.+... + . +
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~-~------------~-------------------------- 213 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA-N-L------------Q-------------------------- 213 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT-T-C------------C--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-c-c------------C--------------------------
Confidence 3579999999999999999999999999999986421 0 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEc--CC--cEEEcCEEEECCCCCCcc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICN--DG--VTIQAAVVLDATGFSRCL 152 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~--~g--~~i~a~~vV~AdG~~s~~ 152 (426)
...+.+.+.+.+.+. ++++ +++|++++.+++++.+++. +| +++.+|.||.|.|..+..
T Consensus 214 -----d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 214 -----DEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp -----CHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred -----CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 003344555555556 9999 9999999988777777775 67 689999999999986543
No 217
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.27 E-value=8.3e-07 Score=85.07 Aligned_cols=38 Identities=26% Similarity=0.490 Sum_probs=35.0
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCC-CcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAG-LSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G-~~V~liE~~~~~ 44 (426)
..++||+|||||++|+++|+.|++.| .+|+|+|+++..
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 46789999999999999999999999 999999997765
No 218
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.27 E-value=3.8e-06 Score=81.48 Aligned_cols=97 Identities=22% Similarity=0.374 Sum_probs=75.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+|+|+.+... + .
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~-~---------------------------------------- 209 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-P-N---------------------------------------- 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-T-T----------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-c-c----------------------------------------
Confidence 479999999999999999999999999999976421 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEc-CC--cEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICN-DG--VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~-~g--~~i~a~~vV~AdG~~s~ 151 (426)
.+ ..+.+.+.+.+.+.|++++ +++|++++.+++++.+.+. +| +++.+|.||.|.|..+.
T Consensus 210 --~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 210 --ED-ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp --SC-HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred --cC-HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 00 1233445566667899999 9999999877666777765 56 68999999999997654
No 219
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.23 E-value=3.6e-06 Score=82.18 Aligned_cols=97 Identities=24% Similarity=0.318 Sum_probs=73.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||||+.|+-+|..|++.|.+|+++|+.+... ++.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~--------------------------------------- 233 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL-AGY--------------------------------------- 233 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-TTT---------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh-hhH---------------------------------------
Confidence 3579999999999999999999999999999976421 000
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEEcCCcEEEcCEEEECCCCCCc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+++.|++++ +++|++++. ++.+ .+.+ +|+++.+|.||.|.|..+.
T Consensus 234 ---~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 234 ---Y-DRDLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp ---S-CHHHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred ---H-HHHHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 0 01244556667777899999 889999986 3333 3445 7789999999999997654
No 220
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.22 E-value=1.1e-06 Score=82.80 Aligned_cols=38 Identities=29% Similarity=0.494 Sum_probs=34.8
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
...+||+|||||++|+++|+.|++.|.+|+|+|+++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 45789999999999999999999999999999998654
No 221
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.22 E-value=1.2e-06 Score=81.75 Aligned_cols=39 Identities=26% Similarity=0.469 Sum_probs=35.2
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCC-CCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPS-PKL 44 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~-~~~ 44 (426)
++..+||+|||||++|+++|+.|++.|++|+|+|+. +..
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 345789999999999999999999999999999998 543
No 222
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.20 E-value=8.4e-07 Score=87.35 Aligned_cols=38 Identities=18% Similarity=0.381 Sum_probs=35.0
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCC-CcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAG-LSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G-~~V~liE~~~~~ 44 (426)
+..+||+|||||++||++|..|++.| ++|+|+|+++.+
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 45689999999999999999999999 999999998765
No 223
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=3e-06 Score=79.49 Aligned_cols=91 Identities=25% Similarity=0.370 Sum_probs=71.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||++|+-+|..|++.|.+|+++|+.+... + . +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~--~------------~-------------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-G--L------------D-------------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-T--C------------C--------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-c--C------------C--------------------------
Confidence 479999999999999999999999999999976421 0 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
..+.+.+.+.+++.|++++ +++|++++ .+ .|++.+|+ +.+|.||.|.|..+.
T Consensus 183 -----~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 183 -----EELSNMIKDMLEETGVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp -----HHHHHHHHHHHHHTTEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEEEC
T ss_pred -----HHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCCcC
Confidence 1344556667777899999 88999887 22 36677887 999999999997654
No 224
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.19 E-value=1e-05 Score=78.67 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=76.9
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~---------------------------------------- 218 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP--A---------------------------------------- 218 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST--T----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc--c----------------------------------------
Confidence 4799999999999999999999999999999763210 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC---cEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG---VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g---~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+.+.|++++ +++|++++.+++++.+++.++ +++.+|.||.|.|..+.
T Consensus 219 --~-~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 219 --V-DEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp --S-CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEEC
T ss_pred --c-CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCccc
Confidence 0 01244556666777899999 899999998877777877755 67999999999997654
No 225
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.17 E-value=1.4e-06 Score=84.79 Aligned_cols=42 Identities=21% Similarity=0.354 Sum_probs=34.9
Q ss_pred CCCCCCcCcEEEECchHHHHHHHHHHHHCC-CcEEEEcCCCCC
Q 014377 3 DPSKGLVVDLAVVGGGPAGLAVAQQVSEAG-LSVCSIDPSPKL 44 (426)
Q Consensus 3 ~~~~~~~~dViIvGgG~aGl~~A~~La~~G-~~V~liE~~~~~ 44 (426)
+++++..+||+|||||++|+++|+.|++.| .+|+|+|+.+..
T Consensus 3 ~m~~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 3 AMAELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp ----CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCcccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 344556799999999999999999999998 799999998654
No 226
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.17 E-value=7.1e-06 Score=79.52 Aligned_cols=97 Identities=14% Similarity=0.197 Sum_probs=77.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.++|||||+.|+-+|..|++.|.+|+++++.+... + .
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-~-~--------------------------------------- 208 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-S-R--------------------------------------- 208 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-T-T---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-c-c---------------------------------------
Confidence 3579999999999999999999999999999876321 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe-EEEE-EcCCcEEEcCEEEECCCCCCc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK-SLLI-CNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~-~~~g~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+.+.|++++ +++|++++.++++ +.|+ +.+|+ +.+|.||.|.|..+.
T Consensus 209 ---~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 209 ---F-DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ---S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred ---c-CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 0 01244566677778999999 8999999887554 6788 88887 999999999998654
No 227
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.16 E-value=1.7e-06 Score=84.60 Aligned_cols=39 Identities=31% Similarity=0.506 Sum_probs=35.3
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
++..+||+|||||++||++|+.|++.|++|+|+|+.+..
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 345789999999999999999999999999999998764
No 228
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.15 E-value=9.3e-06 Score=74.94 Aligned_cols=89 Identities=17% Similarity=0.203 Sum_probs=68.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 4699999999999999999999999999998763210
Q ss_pred cccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCeE-EEEEcC-----CcEEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESKS-LLICND-----GVTIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~-~v~~~~-----g~~i~a~~vV~AdG~~ 149 (426)
.+.+.+.+.+ .|++++ ++++++++.+++++ .|++.+ +.++.+|.||.|.|..
T Consensus 211 --------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 --------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp --------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred --------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 1123444445 499999 99999999876644 355554 3679999999999964
No 229
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=1e-05 Score=75.62 Aligned_cols=94 Identities=16% Similarity=0.189 Sum_probs=70.5
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+..... +
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~----------------------------------------~- 202 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH----------------------------------------G- 202 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC----------------------------------------S-
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC----------------------------------------H-
Confidence 46999999999999999999999999999987532100 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEE--cCC--cEEEcCEEEECCCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLIC--NDG--VTIQAAVVLDATGFSR 150 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~--~~g--~~i~a~~vV~AdG~~s 150 (426)
.+.+.|.+...+.|++++ +++|++++.+++++ .|.+ .+| .++.+|.||.|.|..+
T Consensus 203 ------~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 203 ------KTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp ------HHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCC
T ss_pred ------HHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCC
Confidence 011234444556899999 99999998876643 4444 377 5799999999999654
No 230
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.10 E-value=2.1e-05 Score=76.55 Aligned_cols=96 Identities=19% Similarity=0.150 Sum_probs=73.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.++|||||..|+-+|..|++.|.+|+++++... .+ ..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~--l~-~~--------------------------------------- 225 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV--LR-GF--------------------------------------- 225 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS--ST-TS---------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC--Cc-cc---------------------------------------
Confidence 4699999999999999999999999999987421 10 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCC-eEEEEEcCCc-----EEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEES-KSLLICNDGV-----TIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~-----~i~a~~vV~AdG~~s~ 151 (426)
...+.+.+.+.+.+.|++++ +++|++++.+++ .+.|++.++. ++.+|.||.|.|..+.
T Consensus 226 ----d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 226 ----DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp ----CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred ----CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 01244556666777899999 899999987644 4667766543 7999999999997554
No 231
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.09 E-value=3.4e-05 Score=70.35 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=67.4
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------------~-------------------------- 181 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC----------------A-------------------------- 181 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS----------------C--------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC----------------C--------------------------
Confidence 5799999999999999999999999999998753210 0
Q ss_pred cccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCeE-EEEEc---CCc--EEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESKS-LLICN---DGV--TIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~-~v~~~---~g~--~i~a~~vV~AdG~~ 149 (426)
..+.+.+.+ .|++++ ++++++++.+++++ .|++. +|+ ++.+|.||.|.|..
T Consensus 182 ---------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 182 ---------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp ---------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ---------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 012333333 699999 99999998775553 45554 565 78999999999864
No 232
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.09 E-value=4.1e-07 Score=96.52 Aligned_cols=99 Identities=13% Similarity=0.197 Sum_probs=63.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLD 86 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
..+||+||||||||+++|..|++.|+ +|+|||+.+..+ |.+. .++ +.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~G-----G~~~-----~~i--------p~-------------- 233 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVG-----GLST-----SEI--------PQ-------------- 233 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCS-----THHH-----HTS--------CT--------------
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCC-----cccc-----ccC--------Cc--------------
Confidence 36799999999999999999999999 799999976432 1110 000 10
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCC
Q 014377 87 RPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFS 149 (426)
Q Consensus 87 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~ 149 (426)
+. +... +.....+.+.+.|++++ ++.+.. . .+++.++.++.+|.||.|+|..
T Consensus 234 --~~-~~~~-~~~~~~~~~~~~gv~~~~~~~v~~-----~--~v~~~~~~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 234 --FR-LPYD-VVNFEIELMKDLGVKIICGKSLSE-----N--EITLNTLKEEGYKAAFIGIGLP 286 (1025)
T ss_dssp --TT-SCHH-HHHHHHHHHHTTTCEEEESCCBST-----T--SBCHHHHHHTTCCEEEECCCCC
T ss_pred --cc-CCHH-HHHHHHHHHHHCCcEEEcccEecc-----c--eEEhhhcCccCCCEEEEecCCC
Confidence 00 1111 22233455566899987 555421 1 1333444456799999999984
No 233
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.09 E-value=2e-06 Score=84.32 Aligned_cols=38 Identities=32% Similarity=0.455 Sum_probs=34.2
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
...+||+|||||++|+++|+.|++.|++|+|+|+++..
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 34689999999999999999999999999999998765
No 234
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.07 E-value=1.3e-05 Score=80.24 Aligned_cols=95 Identities=16% Similarity=0.268 Sum_probs=74.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||..|+-+|..|++.|.+|+++|+.+.... .
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~----------------------------------------- 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP-P----------------------------------------- 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-T-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc-c-----------------------------------------
Confidence 4799999999999999999999999999998763210 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+.+.|++++ +++|++++.+++ .|++.+|+++.+|.||.|.|..+.
T Consensus 226 --~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 226 --I-DYEMAAYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp --S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred --C-CHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCCCCC
Confidence 0 01234556666677899999 899999986544 466788999999999999997654
No 235
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.06 E-value=6.1e-06 Score=79.99 Aligned_cols=128 Identities=16% Similarity=0.192 Sum_probs=77.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccchhH---------HHhhcCchhhhhhccCCeEEEe
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPKLIWPNNYGVWVD---------EFEAMDLLDCLDTTWSGAVVHI 77 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~~~g~~~~---------~l~~~~~~~~~~~~~~~~~~~~ 77 (426)
.-.|+|||||..|+-+|..|++. |.+|+++++.+.. .+.....+.. .+..+.... ....-
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~-~p~~~~~~~~~~~~p~~~~~~~~l~~~~--~~~~~------ 297 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL-KPADDSPFVNEVFAPKFTDLIYSREHAE--RERLL------ 297 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC-CBCCCCHHHHGGGSHHHHHHHHHSCHHH--HHHHH------
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC-cCccCCccchhccChhHHHHHhcCCHHH--HHHHH------
Confidence 45799999999999999999998 9999999998753 2221111100 011111000 00000
Q ss_pred cCCCccccCCCccccCHH----HHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCeEEEEEc---CCc--EEEcCEEEECC
Q 014377 78 DDNTKKDLDRPYGRVNRK----LLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESKSLLICN---DGV--TIQAAVVLDAT 146 (426)
Q Consensus 78 ~~~~~~~~~~~~~~v~r~----~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~~v~~~---~g~--~i~a~~vV~Ad 146 (426)
.......|..++.. .......++... .|++++ +++|++++.+++++.|++. +|+ ++.+|.||.|+
T Consensus 298 ----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 298 ----REYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILAT 373 (463)
T ss_dssp ----HHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECC
T ss_pred ----HHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEee
Confidence 00000012222222 222223333333 689999 9999999988888888776 665 49999999999
Q ss_pred CCC
Q 014377 147 GFS 149 (426)
Q Consensus 147 G~~ 149 (426)
|..
T Consensus 374 G~~ 376 (463)
T 3s5w_A 374 GYE 376 (463)
T ss_dssp CEE
T ss_pred CCC
Confidence 964
No 236
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.06 E-value=2.6e-06 Score=79.85 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=33.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
++||+|||||++|+++|..|++.|.+|+|+|+++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 369999999999999999999999999999998654
No 237
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.06 E-value=1.7e-05 Score=74.18 Aligned_cols=103 Identities=16% Similarity=0.270 Sum_probs=72.4
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||..|+-+|..|++.|.+|+++++.+....+. .+ + . .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~-------------~d-------~-------~-----~---- 210 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD-------------AD-------P-------S-----V---- 210 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------C-------T-----T----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC-------------CC-------C-------C-----c----
Confidence 379999999999999999999999999999876321000 00 0 0 0
Q ss_pred cccCHHHHHHHHHHHHHhCC-cEEE-EEEEEEEEEeCCeEEEEEcCCcEEE-cCEEEECCCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNG-VKFH-QAKVIKVIHEESKSLLICNDGVTIQ-AAVVLDATGFSR 150 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~g-v~~~-~~~v~~i~~~~~~~~v~~~~g~~i~-a~~vV~AdG~~s 150 (426)
.+ ...+.+.+.+.+.+.| ++++ +++|.+++.+++.+.|.+.+|+++. +|.||.|+|..+
T Consensus 211 -~~-~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 211 -RL-SPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDA 272 (369)
T ss_dssp -SC-CHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCG
T ss_pred -cC-CHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCC
Confidence 00 1223445555566676 9999 8899999877777788888887665 599999999764
No 238
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.05 E-value=3.4e-05 Score=75.04 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=74.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||..|+-+|..|++.|.+|+++++.+... + ..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~-~~--------------------------------------- 226 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-R-SF--------------------------------------- 226 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-T-TS---------------------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-c-cc---------------------------------------
Confidence 479999999999999999999999999999876421 0 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe--EEEEEcC---C----cEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK--SLLICND---G----VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~--~~v~~~~---g----~~i~a~~vV~AdG~~s~ 151 (426)
...+.+.+.+.+.+.|++++ +++|++++.++++ +.+.+.+ | .++.+|.||.|.|..+.
T Consensus 227 ----d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 227 ----DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp ----CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred ----CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 01133455666677899999 9999999876554 6677765 2 57999999999997543
No 239
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.04 E-value=3.1e-05 Score=71.44 Aligned_cols=93 Identities=13% Similarity=0.214 Sum_probs=70.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.... .
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~-~----------------------------------------- 190 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA-H----------------------------------------- 190 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS-C-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc-c-----------------------------------------
Confidence 4799999999999999999999999999998753210 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEc---CC--cEEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICN---DG--VTIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~---~g--~~i~a~~vV~AdG~~ 149 (426)
..+.+.|.+.+.+.|++++ ++++++++.+++...|++. +| .++.+|.||.|.|..
T Consensus 191 -----~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 191 -----EASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp -----HHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -----HHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 0112345555667899999 9999999875443345554 66 679999999999964
No 240
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.03 E-value=3e-06 Score=84.93 Aligned_cols=39 Identities=28% Similarity=0.433 Sum_probs=34.5
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLI 45 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~ 45 (426)
...+||+|||||++|+++|+.|+++|++|+|||+.+...
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 346899999999999999999999999999999987643
No 241
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.03 E-value=2.4e-06 Score=84.25 Aligned_cols=37 Identities=32% Similarity=0.497 Sum_probs=32.8
Q ss_pred CCcCcEEEECchHHHHHHHHHHHH-CCCcEEEEcCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSE-AGLSVCSIDPSPK 43 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~-~G~~V~liE~~~~ 43 (426)
.++||+||||||+||+.+|.+|++ .|++|+|||+++.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 357999999999999999999998 7899999999864
No 242
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.01 E-value=5.5e-06 Score=79.83 Aligned_cols=38 Identities=34% Similarity=0.603 Sum_probs=34.4
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
...+||+||||||||+++|..|++.|++|+|||+.+..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 35689999999999999999999999999999998643
No 243
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.00 E-value=4.1e-06 Score=78.98 Aligned_cols=36 Identities=28% Similarity=0.487 Sum_probs=33.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
++||+|||||++|+++|..|++.|.+|+|+|+++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 479999999999999999999999999999998754
No 244
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.99 E-value=4e-05 Score=70.15 Aligned_cols=89 Identities=21% Similarity=0.311 Sum_probs=67.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++++.+....
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------- 192 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------- 192 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-------------------------------------------
Confidence 4699999999999999999999999999998653100
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCe-EEEEEc---CCc--EEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESK-SLLICN---DGV--TIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~---~g~--~i~a~~vV~AdG~~ 149 (426)
+ ..+.+.+.+.|++++ +++++++..+++. ..|.+. +|+ ++.+|.||.|.|..
T Consensus 193 ---~-----~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 193 ---E-----NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp ---C-----HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred ---C-----HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 0 113334446899999 9999999876542 234443 564 68999999999864
No 245
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.99 E-value=3.8e-05 Score=69.94 Aligned_cols=89 Identities=24% Similarity=0.278 Sum_probs=66.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------------~-------------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA----------------D-------------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS----------------C--------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc----------------c--------------------------
Confidence 4699999999999999999999999999998763200 0
Q ss_pred cccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCeE-EEEEcC---C--cEEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESKS-LLICND---G--VTIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~-~v~~~~---g--~~i~a~~vV~AdG~~ 149 (426)
+.+.+.+.+ .|++++ +++++++..+++.+ .|++.+ | .++.+|.||.|.|..
T Consensus 183 ---------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 183 ---------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp ---------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ---------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCc
Confidence 023334455 699999 99999998765544 455432 4 378999999999864
No 246
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.98 E-value=4.3e-06 Score=82.82 Aligned_cols=37 Identities=32% Similarity=0.534 Sum_probs=33.9
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
...||+||||+|++|+++|.+|++.|++|+|+|+.+.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 4679999999999999999999999999999999863
No 247
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.98 E-value=6.4e-05 Score=68.97 Aligned_cols=89 Identities=18% Similarity=0.165 Sum_probs=66.3
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------------~-------------------------- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA----------------N-------------------------- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS----------------C--------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc----------------c--------------------------
Confidence 4699999999999999999999999999998753210 0
Q ss_pred cccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCeEEEEEc---CCc--EEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESKSLLICN---DGV--TIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~~v~~~---~g~--~i~a~~vV~AdG~~ 149 (426)
..+.+++.+ .|++++ +++++++..++....|.+. +|+ ++.+|.||.|.|..
T Consensus 191 ---------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 191 ---------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp ---------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ---------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 012233333 699999 9999999875443345554 564 78999999999864
No 248
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.97 E-value=2.8e-05 Score=75.03 Aligned_cols=96 Identities=22% Similarity=0.334 Sum_probs=72.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+.... ..
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~---------------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR-RS---------------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-TT----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch-hh----------------------------------------
Confidence 4799999999999999999999999999998763210 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
. ...+.+.+.+.+.+. ++++ +++|.+++.++ ++.....+++++.+|.||.|.|..+.
T Consensus 188 --~-~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 188 --F-DKEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKPN 245 (449)
T ss_dssp --S-CHHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEEC
T ss_pred --c-CHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCccC
Confidence 0 023445566666667 9988 88999887654 44344567889999999999997643
No 249
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.97 E-value=5.5e-06 Score=81.10 Aligned_cols=39 Identities=28% Similarity=0.400 Sum_probs=35.2
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
+...+||+|||||++|+++|..|++.|++|+|+|+.+..
T Consensus 30 ~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 30 TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERP 68 (498)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 345689999999999999999999999999999998654
No 250
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.96 E-value=5.9e-05 Score=73.52 Aligned_cols=96 Identities=19% Similarity=0.147 Sum_probs=71.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||..|+-+|..|++.|.+|+++++.+. . ...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~--l-~~~--------------------------------------- 223 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP--L-RGF--------------------------------------- 223 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS--S-TTS---------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc--c-ccC---------------------------------------
Confidence 3699999999999999999999999999998531 1 000
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEe-CCeEEEEEcC---Cc--EEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHE-ESKSLLICND---GV--TIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~~~v~~~~---g~--~i~a~~vV~AdG~~s~ 151 (426)
...+.+.+.+.+.+.|++++ ++++.+++.. ++.+.+++.+ |+ ++.+|.||.|.|..+.
T Consensus 224 ----d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 224 ----DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp ----CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred ----CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 01244556666777899999 8999999874 3446666544 44 5789999999997653
No 251
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.91 E-value=5.8e-05 Score=68.97 Aligned_cols=90 Identities=19% Similarity=0.251 Sum_probs=68.4
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------- 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------------------------------------------
Confidence 5799999999999999999999999999998753210
Q ss_pred cccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCeEEEEEcC---Cc--EEEcCEEEECCCCCC
Q 014377 90 GRVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESKSLLICND---GV--TIQAAVVLDATGFSR 150 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~~v~~~~---g~--~i~a~~vV~AdG~~s 150 (426)
+. .+.+++.+ .|++++ ++++++++.+++...|++.+ |+ ++.+|.||.|.|..+
T Consensus 192 ---~~-----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 192 ---QP-----IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp ---CH-----HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred ---CH-----HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 00 12233334 599999 99999998775544566654 65 799999999999643
No 252
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.88 E-value=5.1e-05 Score=73.49 Aligned_cols=97 Identities=19% Similarity=0.256 Sum_probs=71.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||||+.|+-+|..|++.|.+|+++++.+.... ..
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~--------------------------------------- 211 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI-TL--------------------------------------- 211 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TS---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC-CC---------------------------------------
Confidence 35799999999999999999999999999998764210 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeC-CeEEEEEc--CCc--EEEcCEEEECCCCCCcc
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEE-SKSLLICN--DGV--TIQAAVVLDATGFSRCL 152 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~-~~~~v~~~--~g~--~i~a~~vV~AdG~~s~~ 152 (426)
++ ..+.+.+.+... ++++ +++|++++.++ +++.+.+. +|+ ++.+|.||.|.|..+..
T Consensus 212 ---~d-~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 212 ---ED-QDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp ---CC-HHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECC
T ss_pred ---CC-HHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCccc
Confidence 00 112222333222 8888 88999998876 77888887 565 89999999999976543
No 253
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.88 E-value=8.2e-05 Score=67.75 Aligned_cols=90 Identities=17% Similarity=0.205 Sum_probs=67.3
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+.... +
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~-----------------~------------------------- 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA-----------------A------------------------- 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS-----------------C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC-----------------C-------------------------
Confidence 4699999999999999999999999999998753200 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeE-EEEEc--CCc--EEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKS-LLICN--DGV--TIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~--~g~--~i~a~~vV~AdG~~ 149 (426)
. ..+.+...+.|++++ ++++.+++.+++++ .|++. +|+ ++.+|.||.|.|..
T Consensus 186 ----~----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 186 ----P----STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp ----H----HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred ----H----HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 0 111122245799999 99999998877543 24444 775 78999999999964
No 254
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.83 E-value=5.4e-06 Score=81.74 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=33.2
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
..+||+||||||+||+.+|.+|++ |.+|+|||+.+.
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 356999999999999999999999 999999999864
No 255
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.83 E-value=3.2e-05 Score=74.25 Aligned_cols=93 Identities=16% Similarity=0.201 Sum_probs=70.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..+++.|.+|+|+|+.+.... .. +
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~--~~------------d-------------------------- 187 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK--LM------------D-------------------------- 187 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST--TS------------C--------------------------
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc--cc------------c--------------------------
Confidence 4799999999999999999999999999998764210 00 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
..+.+.+.+.+.+.|++++ +++|++++. + .+++.+|+++.+|.||.|.|....
T Consensus 188 -----~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 188 -----ADMNQPILDELDKREIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp -----GGGGHHHHHHHHHTTCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCEEES
T ss_pred -----chhHHHHHHHhhccceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEeceecC
Confidence 0011234555567899998 888887752 2 477889999999999999997543
No 256
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.83 E-value=1e-05 Score=80.06 Aligned_cols=37 Identities=32% Similarity=0.537 Sum_probs=34.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCC-CcEEEEcCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAG-LSVCSIDPSPK 43 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G-~~V~liE~~~~ 43 (426)
..+||+||||||.||+.+|.+|++.| .+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 45799999999999999999999987 79999999876
No 257
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.82 E-value=1.9e-05 Score=71.39 Aligned_cols=85 Identities=12% Similarity=0.166 Sum_probs=65.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
.-.|+|||+|+.|+-+|..|++.| +|+++++.+..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~-------------------------------------------- 175 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE-------------------------------------------- 175 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC--------------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC--------------------------------------------
Confidence 357999999999999999999999 99999876420
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCC
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFS 149 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~ 149 (426)
+ .+.+.+.+.+.|++++.++|++++.++ .|++.+|+++.+|.||.|.|..
T Consensus 176 ---~-----~~~~~~~l~~~gv~i~~~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 176 ---P-----DADQHALLAARGVRVETTRIREIAGHA---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp ---C-----CHHHHHHHHHTTCEEECSCEEEEETTE---EEEETTSCEEEESEEEECCEEE
T ss_pred ---C-----CHHHHHHHHHCCcEEEcceeeeeecCC---eEEeCCCCEEEEEEEEEccCcc
Confidence 0 011234455689998876787776432 6788899999999999999864
No 258
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.79 E-value=4.2e-05 Score=70.27 Aligned_cols=90 Identities=16% Similarity=0.174 Sum_probs=67.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+.... ...
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~---------------~~~------------------------- 194 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA---------------HEH------------------------- 194 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS---------------CHH-------------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc---------------cHH-------------------------
Confidence 4799999999999999999999999999998753210 000
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcC-----CcEEEcCEEEECCCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICND-----GVTIQAAVVLDATGFSR 150 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~-----g~~i~a~~vV~AdG~~s 150 (426)
..+.+.+.|++++ ++++.+++.+++...|++.+ +.++.+|.||.|.|..+
T Consensus 195 -----------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 195 -----------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp -----------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEEC
T ss_pred -----------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCC
Confidence 0122456899999 89999998766554555544 35799999999999643
No 259
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.78 E-value=0.00013 Score=67.05 Aligned_cols=89 Identities=19% Similarity=0.235 Sum_probs=66.4
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|..|+-+|..|++.|.+|+++++.+....
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------------------------------- 196 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA------------------------------------------- 196 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-------------------------------------------
Confidence 4799999999999999999999999999998763210
Q ss_pred cccCHHHHHHHHHHH-HHhCCcEEE-EEEEEEEEEeCC--eE-EEEEc---CC--cEEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQK-CITNGVKFH-QAKVIKVIHEES--KS-LLICN---DG--VTIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~-~~~~gv~~~-~~~v~~i~~~~~--~~-~v~~~---~g--~~i~a~~vV~AdG~~ 149 (426)
. +.+.++ ..+.|++++ ++++++++.+++ .+ .|.+. +| .++.+|.||.|.|..
T Consensus 197 ---~-----~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 197 ---S-----KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp ---C-----HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ---c-----HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 0 112222 235799999 999999987663 33 24443 44 579999999999964
No 260
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.78 E-value=1.4e-05 Score=79.17 Aligned_cols=36 Identities=36% Similarity=0.642 Sum_probs=33.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHH-CCCcEEEEcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSE-AGLSVCSIDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~-~G~~V~liE~~~ 42 (426)
..+||+||||||.|||.+|.+|++ .+.+|+|||+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 357999999999999999999997 589999999987
No 261
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.77 E-value=0.00025 Score=69.53 Aligned_cols=96 Identities=23% Similarity=0.269 Sum_probs=68.9
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||..|+-+|..|++.|.+|+++++... . ...
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~--l-~~~--------------------------------------- 248 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL--L-RGF--------------------------------------- 248 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS--S-TTS---------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecccc--c-ccC---------------------------------------
Confidence 3599999999999999999999999999997421 0 000
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeC----CeEEEE--EcCC---cEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEE----SKSLLI--CNDG---VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~----~~~~v~--~~~g---~~i~a~~vV~AdG~~s~ 151 (426)
+ ..+.+.+.+.+.+.|++++ ++++++++..+ +.+.++ ..+| .++.+|.||.|.|....
T Consensus 249 ---d-~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 249 ---D-QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp ---C-HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEES
T ss_pred ---C-HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCccc
Confidence 0 1244455666677899999 88888876543 344443 4455 25789999999997653
No 262
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.76 E-value=2.3e-05 Score=80.27 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=34.1
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
...+||+||||||||+++|..|++.|++|+|||+.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3468999999999999999999999999999999865
No 263
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.73 E-value=0.00011 Score=67.76 Aligned_cols=89 Identities=22% Similarity=0.292 Sum_probs=64.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+.... . .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~--------------------------------~--------~- 194 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA--------------------------------S--------K- 194 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS--------------------------------C--------T-
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc--------------------------------c--------H-
Confidence 5799999999999999999999999999998753200 0 0
Q ss_pred cccCHHHHHHHHHHH-HHhCCcEEE-EEEEEEEEEeCCe--EEEEE-cCC--cEEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQK-CITNGVKFH-QAKVIKVIHEESK--SLLIC-NDG--VTIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~-~~~~gv~~~-~~~v~~i~~~~~~--~~v~~-~~g--~~i~a~~vV~AdG~~ 149 (426)
.+.++ ..+.|++++ ++++++++.+++. +.+.. .+| +++.+|.||.|.|..
T Consensus 195 ----------~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 195 ----------IMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp ----------THHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred ----------HHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 01112 235799999 9999999866532 33332 144 578999999999964
No 264
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.71 E-value=3e-05 Score=78.47 Aligned_cols=38 Identities=24% Similarity=0.473 Sum_probs=34.7
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
...+||+|||||++|+++|..|++.|++|+|+|+.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999998654
No 265
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.69 E-value=0.00013 Score=71.21 Aligned_cols=95 Identities=25% Similarity=0.371 Sum_probs=65.9
Q ss_pred CcEEEECchHHHHHHHHHHHHC--------------CCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEE
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA--------------GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVV 75 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~--------------G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~ 75 (426)
..++|||||++|+-+|..|+.. ..+|+|+|..+...
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 3699999999999999888753 25677777665311
Q ss_pred EecCCCccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC----cEEEcCEEEECCCCC
Q 014377 76 HIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG----VTIQAAVVLDATGFS 149 (426)
Q Consensus 76 ~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g----~~i~a~~vV~AdG~~ 149 (426)
.. + ...+.+.+.+.+++.||+++ +++|++++.++....+...|| +++.||+||.|.|..
T Consensus 268 -----------~~---~-~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 268 -----------NM---F-EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp -----------TT---S-CHHHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred -----------cC---C-CHHHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 00 1 12344556666778999999 999998864322233445566 369999999999964
No 266
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.68 E-value=1.9e-05 Score=76.10 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=32.9
Q ss_pred CcCcEEEECchHHHHHHHHHHHH-C------CCcEEEEcCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSE-A------GLSVCSIDPSPK 43 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~-~------G~~V~liE~~~~ 43 (426)
..+||+||||||||+.+|..|++ . |.+|+|||+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 35799999999999999999999 7 999999999864
No 267
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.68 E-value=7.1e-05 Score=73.73 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=32.6
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
-.|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 213 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQY 213 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 47999999999999999999999999999998863
No 268
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.68 E-value=1.2e-05 Score=79.32 Aligned_cols=35 Identities=34% Similarity=0.491 Sum_probs=32.6
Q ss_pred cCcEEEECchHHHHHHHHHHHH-CCCcEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSE-AGLSVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~-~G~~V~liE~~~~ 43 (426)
+||+||||||.||+.+|.+|++ .|.+|+|||+.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCc
Confidence 5899999999999999999998 7999999999764
No 269
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.68 E-value=2.9e-05 Score=78.77 Aligned_cols=37 Identities=41% Similarity=0.585 Sum_probs=34.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
..+||+||||||||+++|..|++.|++|+|||+.+..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4689999999999999999999999999999998653
No 270
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.67 E-value=3.8e-05 Score=75.20 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=34.8
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
+...+|++|||+|++|+.+|..|++.|.+|+|||+.+.
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 45679999999999999999999999999999999753
No 271
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.66 E-value=4.2e-05 Score=78.96 Aligned_cols=38 Identities=24% Similarity=0.473 Sum_probs=34.6
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
....+|+|||||++|+++|+.|++.|++|+|+|+.+.+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 34679999999999999999999999999999998754
No 272
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.63 E-value=2.4e-05 Score=73.74 Aligned_cols=85 Identities=18% Similarity=0.189 Sum_probs=63.3
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+... ++..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-~~~~--------------------------------------- 186 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL-ERQL--------------------------------------- 186 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC-TTTS---------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc-hhhc---------------------------------------
Confidence 479999999999999999999999999999986421 0000
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
...+.+.+.+.+.+.|++++ +++++++ |+++.+|.||.|.|..+.
T Consensus 187 ----~~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 187 ----DRDGGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp ----CHHHHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEEC
T ss_pred ----CHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCcccC
Confidence 01233445556667899988 7766554 556889999999997654
No 273
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.62 E-value=0.00062 Score=68.07 Aligned_cols=95 Identities=19% Similarity=0.156 Sum_probs=67.4
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCcc
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPYG 90 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (426)
.|+|||||..|+-+|..|++.|.+|+++++... . ..
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~--l-~~----------------------------------------- 323 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRSIL--L-RG----------------------------------------- 323 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS--S-TT-----------------------------------------
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECCcC--c-Cc-----------------------------------------
Confidence 699999999999999999999999999998621 0 00
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEe------C---CeEEEE--EcCCcEEE--cCEEEECCCCCCc
Q 014377 91 RVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHE------E---SKSLLI--CNDGVTIQ--AAVVLDATGFSRC 151 (426)
Q Consensus 91 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~------~---~~~~v~--~~~g~~i~--a~~vV~AdG~~s~ 151 (426)
.+ ..+.+.+.+.+.+.|++++ ++++++++.. + +.+.+. ..+|+++. +|.||.|.|..+.
T Consensus 324 -~d-~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 324 -FD-QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp -SC-HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEEC
T ss_pred -CC-HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccc
Confidence 00 0122334455566899998 8888777643 2 344443 46776665 9999999997653
No 274
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.61 E-value=3.6e-05 Score=75.28 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=33.7
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
+..+|++|||+|++|+++|..|++.|.+|+|||+.+.
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3569999999999999999999999999999998763
No 275
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.58 E-value=0.00037 Score=68.40 Aligned_cols=89 Identities=21% Similarity=0.284 Sum_probs=66.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||..|+-+|..|++.|.+|+++++.+....
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~------------------------------------------- 392 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------- 392 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc-------------------------------------------
Confidence 4799999999999999999999999999998753110
Q ss_pred cccCHHHHHHHHHHHHHh-CCcEEE-EEEEEEEEEeCCeE-EEEEc---CC--cEEEcCEEEECCCCC
Q 014377 90 GRVNRKLLKSKMLQKCIT-NGVKFH-QAKVIKVIHEESKS-LLICN---DG--VTIQAAVVLDATGFS 149 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~-~v~~~---~g--~~i~a~~vV~AdG~~ 149 (426)
+ +.+.+++.+ .|++++ +++++++..+++++ .+++. +| .++.+|.||.|.|..
T Consensus 393 ---~-----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 393 ---D-----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp ---C-----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred ---C-----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 0 123344445 699999 99999998765544 45544 34 368999999999853
No 276
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.57 E-value=4.8e-05 Score=73.44 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=63.7
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCC--CcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCcccc
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAG--LSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDL 85 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+||+||||||+|+.+|..|++.| ++|+|||+.+.+ +|.|.. ++. + ...
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~-----gg~~~~-----g~~-------p-------~~~---- 56 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP-----FGLVRF-----GVA-------P-------DHP---- 56 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS-----CTHHHH-----TSC-------T-------TCG----
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC-----Cceeec-----ccC-------C-------CCc----
Confidence 4589999999999999999999988 999999998743 233311 100 0 000
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 86 DRPYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 86 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
....+...+.+.+.+.|++++ ++.|. . .|++.+ .++.+|.||.|+|...
T Consensus 57 -------~~~~~~~~~~~~~~~~gv~~~~~~~v~------~--~V~~~~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 57 -------EVKNVINTFTQTARSDRCAFYGNVEVG------R--DVTVQE-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp -------GGGGHHHHHHHHHTSTTEEEEBSCCBT------T--TBCHHH-HHHHSSEEEECCCCCE
T ss_pred -------cHHHHHHHHHHHHHhCCcEEEeeeEEe------e--EEEecc-ceEEcCEEEEecCcCC
Confidence 001233445566666888887 65441 1 122333 2467999999999874
No 277
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.57 E-value=5.1e-05 Score=75.57 Aligned_cols=38 Identities=32% Similarity=0.480 Sum_probs=34.3
Q ss_pred CCcCcEEEECchHHHHHHHHHHHH-CCCcEEEEcCCCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSE-AGLSVCSIDPSPKL 44 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~-~G~~V~liE~~~~~ 44 (426)
+..+|+||||+|++|+++|.+|++ .|.+|+|||+++..
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 357999999999999999999999 89999999997543
No 278
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.53 E-value=6e-05 Score=74.41 Aligned_cols=37 Identities=43% Similarity=0.617 Sum_probs=33.8
Q ss_pred CcCcEEEECchHHHHHHHHHHHHC-CCcEEEEcCCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEA-GLSVCSIDPSPKL 44 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~-G~~V~liE~~~~~ 44 (426)
..+|++|||+|++|+++|.+|++. |.+|+|||+.+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 579999999999999999999997 9999999997543
No 279
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.51 E-value=0.00011 Score=72.99 Aligned_cols=39 Identities=23% Similarity=0.272 Sum_probs=36.6
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
+++.|||+|||+|+.|+.+|..|++.|.+|++||+++..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~ 43 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYY 43 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcc
Confidence 466899999999999999999999999999999999875
No 280
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.45 E-value=0.00021 Score=68.75 Aligned_cols=78 Identities=12% Similarity=0.114 Sum_probs=58.3
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCc-EEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLS-VCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~-V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
-+|+|||||.+|+-+|..|++.|.+ |+++++.+..
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~-------------------------------------------- 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD-------------------------------------------- 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS--------------------------------------------
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc--------------------------------------------
Confidence 4799999999999999999999999 9999987532
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcE-EEcCEEEECCCCCC
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVT-IQAAVVLDATGFSR 150 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~-i~a~~vV~AdG~~s 150 (426)
....|+++ ...|+++..+++ .|++.||++ +.+|.||.|+|...
T Consensus 249 ----------------l~~~~i~~-~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~~~ 292 (447)
T 2gv8_A 249 ----------------IQNESLQQ-VPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGYLY 292 (447)
T ss_dssp ----------------CBCSSEEE-ECCEEEEETTTT--EEEETTTEEECCCSEEEECCCBCC
T ss_pred ----------------CCCCCeEE-ecCeEEEecCCC--EEEECCCCEeccCCEEEECCCCCc
Confidence 01134442 445666643333 567788876 68999999999764
No 281
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.43 E-value=2.5e-05 Score=77.08 Aligned_cols=36 Identities=17% Similarity=0.366 Sum_probs=33.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
.-.|+|||+|..|+-+|..|++.+.+|+|+++.+..
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 347999999999999999999999999999998863
No 282
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.35 E-value=9.4e-05 Score=74.41 Aligned_cols=34 Identities=26% Similarity=0.532 Sum_probs=32.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCC--------CcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAG--------LSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G--------~~V~liE~~~ 42 (426)
..+|+|||||++|+++|+.|++.| ++|+|+|+.+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 578999999999999999999998 9999999987
No 283
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.31 E-value=0.00051 Score=66.34 Aligned_cols=79 Identities=13% Similarity=0.163 Sum_probs=58.6
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||||.+|+-+|..|++.|.+|+++++.+.+. +. .+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~-~~--------------------~~------------------- 237 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM-GY--------------------KW------------------- 237 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC-CC--------------------CC-------------------
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC-CC--------------------CC-------------------
Confidence 469999999999999999999999999999875421 00 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSR 150 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s 150 (426)
..|++++ ..|++++ ++ .|++.||+++.+|.||.|+|...
T Consensus 238 -----------------~~~V~~~-~~V~~i~--~~--~V~~~dG~~i~~D~Vi~atG~~p 276 (464)
T 2xve_A 238 -----------------PENWDER-PNLVRVD--TE--NAYFADGSSEKVDAIILCTGYIH 276 (464)
T ss_dssp -----------------CTTEEEC-SCEEEEC--SS--EEEETTSCEEECSEEEECCCBCC
T ss_pred -----------------CCceEEc-CCeEEEe--CC--EEEECCCCEEeCCEEEECCCCCC
Confidence 0245544 4455553 23 46788999999999999999764
No 284
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.28 E-value=0.00025 Score=69.95 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=33.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
.-.|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 357999999999999999999999999999998863
No 285
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.04 E-value=0.00079 Score=71.01 Aligned_cols=88 Identities=17% Similarity=0.319 Sum_probs=67.3
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
-.|+|||+|+.|+-+|..|++.|.+|+|+|+.+... .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------~------------------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------A------------------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------H-------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------h-------------------------------
Confidence 469999999999999999999999999999876320 0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEe-CCeE-EEEEcC-------C--cEEEcCEEEECCCCCCc
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHE-ESKS-LLICND-------G--VTIQAAVVLDATGFSRC 151 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~~-~v~~~~-------g--~~i~a~~vV~AdG~~s~ 151 (426)
. .+.+++.|++++ ++++++++.+ ++++ .|++.+ | +++.+|.||.|.|..+.
T Consensus 322 ----~-------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~ 384 (965)
T 2gag_A 322 ----A-------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPV 384 (965)
T ss_dssp ----H-------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEEC
T ss_pred ----h-------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcC
Confidence 0 133456899999 9999999874 3332 444443 4 67999999999997654
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.87 E-value=0.0039 Score=59.96 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=30.5
Q ss_pred cCcEEEECchHHHHHHHHHHH--------------------HCCC-cEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVS--------------------EAGL-SVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La--------------------~~G~-~V~liE~~~~ 43 (426)
.-.|+|||||..|+-+|..|+ +.|. +|+|+++.+.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 357999999999999999999 5788 6999998763
No 287
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.87 E-value=0.006 Score=64.77 Aligned_cols=91 Identities=19% Similarity=0.189 Sum_probs=63.3
Q ss_pred cEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCCc
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPY 89 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (426)
.|+|||||..|+-+|..+++.|. +|+++++.+....+. ...
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~-------------~~~------------------------- 375 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRA-------------VPE------------------------- 375 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCS-------------CHH-------------------------
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCC-------------CHH-------------------------
Confidence 89999999999999999999997 899999875211000 000
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEE-EEEc------CC---------cEEEcCEEEECCCCCC
Q 014377 90 GRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSL-LICN------DG---------VTIQAAVVLDATGFSR 150 (426)
Q Consensus 90 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~------~g---------~~i~a~~vV~AdG~~s 150 (426)
. .+.+.+.|++++ ++.++++..+++.++ |++. +| .++.+|.||.|.|...
T Consensus 376 ------e-----~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~ 442 (1025)
T 1gte_A 376 ------E-----VELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVL 442 (1025)
T ss_dssp ------H-----HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred ------H-----HHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCC
Confidence 0 023456789988 788888876555442 3321 22 3689999999999843
No 288
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.84 E-value=0.0035 Score=63.52 Aligned_cols=130 Identities=16% Similarity=0.134 Sum_probs=66.4
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhh-ccCCeEEEecCCCccccCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDT-TWSGAVVHIDDNTKKDLDR 87 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 87 (426)
.-.|+|||||..|+-+|..|++.|.+|+++-.. +.+.|+.-...+....+...... ......+..-......+..
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~ 569 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAG----FCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQ 569 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHH----HHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTT
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhh----hhhhhcccccccccccccccccccCCCCcEEEEEEecchhhcc
Confidence 357999999999999999999988776542000 00000000000000000000000 0011122111111111111
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCC
Q 014377 88 PYGRVNRKLLKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFS 149 (426)
Q Consensus 88 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~ 149 (426)
.+... ....+.+.+.+.|++++ +++|++++ ++++.++ .+| +++.+|.||.|.|..
T Consensus 570 ~l~~~----~~~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 570 GLGKT----TGWIHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp TSCTT----THHHHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred ccccc----cHHHHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 11111 22234455567899999 99998886 3455554 567 579999999999964
No 289
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.83 E-value=0.0012 Score=60.99 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=29.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
-.|+|||+|..|+-+|..|++.| +|+++.+.+.
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~ 196 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEP 196 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCC
Confidence 57999999999999999999998 7999998753
No 290
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.82 E-value=0.001 Score=67.97 Aligned_cols=33 Identities=12% Similarity=0.137 Sum_probs=30.8
Q ss_pred CcEEEEC--chHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVG--GGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvG--gG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
-.|+||| ||..|+-+|..|++.|.+|+++++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799998 99999999999999999999999875
No 291
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.80 E-value=0.0012 Score=53.21 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=32.5
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.....|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 345679999999999999999999999999999875
No 292
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.78 E-value=0.0069 Score=58.19 Aligned_cols=128 Identities=20% Similarity=0.231 Sum_probs=71.8
Q ss_pred cCcEEEECchHHHHHHHHHHHHC--------------------CC-cEEEEcCCCCCCCCCcccchhHHHhhcCchhhhh
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEA--------------------GL-SVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLD 67 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~--------------------G~-~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 67 (426)
.-.|+|||+|..|+-+|..|++. |. +|+|+++...... .+ ....+.++.
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~--~f--~~~elrel~------ 216 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQA--AF--TTLELRELA------ 216 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGC--CC--CHHHHHHGG------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhh--cc--ChHHHHHhh------
Confidence 34799999999999999999874 64 9999998763211 11 111222111
Q ss_pred hccCCeEEEecCCCccccCCCcc----ccC--HHHHHHHHHHHHHh------CCcEEE-EEEEEEEEEeCC--eEEEEE-
Q 014377 68 TTWSGAVVHIDDNTKKDLDRPYG----RVN--RKLLKSKMLQKCIT------NGVKFH-QAKVIKVIHEES--KSLLIC- 131 (426)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~----~v~--r~~l~~~L~~~~~~------~gv~~~-~~~v~~i~~~~~--~~~v~~- 131 (426)
..++..+..... .+..... ..+ +..+.+.|.+.+.+ .|++++ +++++++..++. ++.+..
T Consensus 217 -~lp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~ 292 (456)
T 1lqt_A 217 -DLDGVDVVIDPA---ELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRN 292 (456)
T ss_dssp -GCTTEEEECCGG---GGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEE
T ss_pred -cCCCceeeeChH---HhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEE
Confidence 112222221110 0100000 011 22334556565555 689998 889988875532 133321
Q ss_pred -------------cCC--cEEEcCEEEECCCCCC
Q 014377 132 -------------NDG--VTIQAAVVLDATGFSR 150 (426)
Q Consensus 132 -------------~~g--~~i~a~~vV~AdG~~s 150 (426)
.+| +++.||+||.|.|..+
T Consensus 293 ~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 293 ELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp EEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred EecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 134 4689999999999754
No 293
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.77 E-value=0.0014 Score=62.97 Aligned_cols=36 Identities=17% Similarity=0.295 Sum_probs=31.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCc-EEEEcCCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLS-VCSIDPSPKL 44 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~-V~liE~~~~~ 44 (426)
.-+|+|||||..|+-+|..+.+.|.+ |+++++.+..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 35799999999999999999999984 9999987643
No 294
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.72 E-value=0.002 Score=50.97 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=32.2
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34579999999999999999999999999999975
No 295
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.57 E-value=0.014 Score=52.81 Aligned_cols=33 Identities=30% Similarity=0.397 Sum_probs=30.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
-.|+|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 479999999999999999999999999999865
No 296
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.55 E-value=0.0021 Score=50.73 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=31.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 297
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.37 E-value=0.0084 Score=56.69 Aligned_cols=49 Identities=14% Similarity=0.237 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCC
Q 014377 97 LKSKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFS 149 (426)
Q Consensus 97 l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~ 149 (426)
+.+.+.+.+++.|++++ +++|++++.+ + |++++|+++.+|+||.|.|..
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCC
Confidence 44455666667899999 8999888643 2 778899999999999999864
No 298
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.34 E-value=0.0049 Score=49.45 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=31.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999864
No 299
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.33 E-value=0.0052 Score=58.62 Aligned_cols=49 Identities=8% Similarity=0.042 Sum_probs=35.1
Q ss_pred HHHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEc--CCcEEEcCEEEECCCCC
Q 014377 99 SKMLQKCITNGVKFH-QAKVIKVIHEESKSLLICN--DGVTIQAAVVLDATGFS 149 (426)
Q Consensus 99 ~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~--~g~~i~a~~vV~AdG~~ 149 (426)
+.+.+.+++.|++++ +++|++++. +++.+... +++++.+|.||.|.|..
T Consensus 204 ~~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 204 RLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCCc
Confidence 445566677899999 999998864 33433321 26789999999998854
No 300
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.14 E-value=0.0042 Score=48.75 Aligned_cols=33 Identities=27% Similarity=0.449 Sum_probs=30.6
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|+|+|+|..|..+|..|++.|.+|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 301
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.13 E-value=0.0089 Score=57.09 Aligned_cols=48 Identities=15% Similarity=0.171 Sum_probs=34.2
Q ss_pred HHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEE--cC-----CcEEEcCEEEECCCCC
Q 014377 100 KMLQKCITNGVKFH-QAKVIKVIHEESKSLLIC--ND-----GVTIQAAVVLDATGFS 149 (426)
Q Consensus 100 ~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~--~~-----g~~i~a~~vV~AdG~~ 149 (426)
.+.+.+.+.|++++ +++|++++. +++.+.. .+ +.++.+|+||.|.|..
T Consensus 213 ~~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 213 ILTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCc
Confidence 44555567899999 999998863 4444443 23 4678999999998853
No 302
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.06 E-value=0.0043 Score=47.02 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=30.6
Q ss_pred CcEEEECchHHHHHHHHHHHHCC-CcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAG-LSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G-~~V~liE~~~ 42 (426)
..|+|+|+|..|..++..|.+.| ++|.++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 9999999864
No 303
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.87 E-value=0.0051 Score=60.60 Aligned_cols=36 Identities=19% Similarity=0.472 Sum_probs=32.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
.-.|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 347999999999999999999999999999997753
No 304
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.84 E-value=0.0069 Score=54.77 Aligned_cols=35 Identities=29% Similarity=0.378 Sum_probs=31.3
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..-.|.|||+|.-|...|..++..|++|+|+|..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 44579999999999999999999999999999875
No 305
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.76 E-value=0.01 Score=54.22 Aligned_cols=40 Identities=18% Similarity=0.115 Sum_probs=34.1
Q ss_pred CCCCCCcCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 3 DPSKGLVVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 3 ~~~~~~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
+.+.+....|.|||+|-.|..+|..|++.|+ +|+|+|..+
T Consensus 3 ~~~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 3 PALVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3333445689999999999999999999998 999999875
No 306
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.70 E-value=0.0077 Score=54.55 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=31.1
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
.|+|||||+.|+-+|..|++.|.+|+|+|+.+.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 699999999999999999999999999998764
No 307
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.57 E-value=0.012 Score=46.26 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=30.4
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
-.|+|+|+|..|..+|..|.+.|.+|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 308
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.55 E-value=0.011 Score=48.83 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=31.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHC-CCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEA-GLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~-G~~V~liE~~~ 42 (426)
.-.|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 34799999999999999999999 99999999875
No 309
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.52 E-value=0.012 Score=50.36 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=30.4
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999875
No 310
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.52 E-value=0.012 Score=52.65 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=31.4
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|.-|..+|..|++.|++|+++|+.+
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3579999999999999999999999999999875
No 311
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.23 E-value=0.015 Score=52.77 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=31.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|.-|..+|..|++.|++|+++|+.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999875
No 312
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.15 E-value=0.021 Score=52.08 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=31.8
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
+...|.|||+|-.|..+|..|++.|+ +|+++|.++
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 34589999999999999999999999 999999875
No 313
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.12 E-value=0.02 Score=55.64 Aligned_cols=49 Identities=16% Similarity=0.110 Sum_probs=39.2
Q ss_pred HHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCCcEEEcCEEEECCCCCCc
Q 014377 103 QKCITNGVKFH-QAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRC 151 (426)
Q Consensus 103 ~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vV~AdG~~s~ 151 (426)
+.+++.|++++ +++|++++.+++...+.+.+|+++.+|.||.|.|..+.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPD 314 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEEC
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcC
Confidence 44556799999 88999998655444577888999999999999997654
No 314
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.12 E-value=0.019 Score=51.86 Aligned_cols=33 Identities=30% Similarity=0.555 Sum_probs=30.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|..|..+|..|++.|++|+++|+.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 315
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=95.09 E-value=0.041 Score=49.48 Aligned_cols=86 Identities=10% Similarity=0.103 Sum_probs=55.9
Q ss_pred CcEEEECchH-HHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccchhHHHhhcCchhhhhhccCCeEEEecCCCccccCCC
Q 014377 10 VDLAVVGGGP-AGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRP 88 (426)
Q Consensus 10 ~dViIvGgG~-aGl~~A~~La~~G~~V~liE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
-+++|||||. +++.+|..+++.|.+|+++++.+...
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~------------------------------------------- 183 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS------------------------------------------- 183 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC-------------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccccch-------------------------------------------
Confidence 3567777665 56788888888899999987653210
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEEEEEEEEEEEeCCeE-EEEEcCCcEEEcCEEEECCCC
Q 014377 89 YGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKS-LLICNDGVTIQAAVVLDATGF 148 (426)
Q Consensus 89 ~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vV~AdG~ 148 (426)
+.+.+.+.+.|+.++...+..+..+++.+ .|++.+|+++.++.+|.+.|.
T Consensus 184 ----------~~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~ 234 (304)
T 4fk1_A 184 ----------QTIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTF 234 (304)
T ss_dssp ----------HHHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEE
T ss_pred ----------hhhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeecc
Confidence 01123344567777733466665554443 577889988988888777653
No 316
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.02 E-value=0.019 Score=55.00 Aligned_cols=35 Identities=26% Similarity=0.264 Sum_probs=32.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..-.|.|||.|.+|+++|..|+++|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34579999999999999999999999999999875
No 317
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.02 E-value=0.026 Score=47.86 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=31.5
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
....|.|||+|-.|.++|..|++.|.+|.++++.+.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 346799999999999999999999999999998753
No 318
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.00 E-value=1 Score=45.32 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=35.7
Q ss_pred CCcEEE-EEEEEEEEEeCCeEEEEEcC------CcEEEcCEEEECCCCC
Q 014377 108 NGVKFH-QAKVIKVIHEESKSLLICND------GVTIQAAVVLDATGFS 149 (426)
Q Consensus 108 ~gv~~~-~~~v~~i~~~~~~~~v~~~~------g~~i~a~~vV~AdG~~ 149 (426)
.+++++ +++|++|+.+++++.|++.+ +++++||.||.|....
T Consensus 409 ~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~ 457 (662)
T 2z3y_A 409 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLG 457 (662)
T ss_dssp TTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHH
T ss_pred hcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHH
Confidence 366888 99999999999999888766 5689999999998753
No 319
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.91 E-value=0.023 Score=51.65 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=30.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|-.|.++|..|++.|.+|++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999864
No 320
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.88 E-value=0.039 Score=53.66 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=29.6
Q ss_pred CcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~ 43 (426)
-.|+|||+|-+|.-++..|++. +.+|+++=|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 3699999999999999999875 789999988764
No 321
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.88 E-value=0.023 Score=52.53 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=32.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
....|.|||+|--|.++|..|++.|++|.++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999864
No 322
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.80 E-value=0.027 Score=51.16 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=31.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
...|.|||+|-.|..+|..|++.|+ +|+++|+.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4579999999999999999999998 999999875
No 323
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.75 E-value=0.022 Score=52.65 Aligned_cols=33 Identities=33% Similarity=0.335 Sum_probs=30.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|-.|..+|..|++.|++|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999864
No 324
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.72 E-value=0.032 Score=50.45 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=32.3
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPS 41 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~ 41 (426)
++....|.|||+|..|..+|..|++.|+ +|+++|..
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3445689999999999999999999999 99999986
No 325
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.71 E-value=0.023 Score=48.55 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=31.8
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEE-EcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCS-IDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~l-iE~~~ 42 (426)
++...|.|||+|-.|..+|..|++.|++|++ +++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 3346899999999999999999999999999 88764
No 326
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.61 E-value=0.024 Score=51.01 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=32.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
...|.|||.|-.|..+|..|++.|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 327
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.58 E-value=0.042 Score=49.57 Aligned_cols=36 Identities=31% Similarity=0.457 Sum_probs=32.5
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.....|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 345689999999999999999999999999999875
No 328
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=94.56 E-value=0.51 Score=45.60 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=29.4
Q ss_pred CceeEeeccCCCCCCCCcHHHHHHHHhcHHHHHHHHHhcCC
Q 014377 275 QRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSS 315 (426)
Q Consensus 275 ~~v~liGdAa~~~~P~~G~G~~~a~~~a~~la~~i~~~l~~ 315 (426)
+++.++|++.+ |.|+..|+.+|..+|+.|.+.+..
T Consensus 461 ~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 461 PGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp TTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 68999999854 568999999999999999887754
No 329
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.54 E-value=0.035 Score=47.32 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=30.6
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPS 41 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~ 41 (426)
...|+|||||..|...|..|.+.|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 457999999999999999999999999999875
No 330
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.51 E-value=0.04 Score=50.05 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=31.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
....|.|||+|-.|..+|..|+..|+ +|+|+|..+
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 34589999999999999999999998 999999864
No 331
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.50 E-value=0.028 Score=50.88 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=30.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|-.|.++|..|++.|.+|++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999863
No 332
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.41 E-value=0.04 Score=50.47 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=30.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPS 41 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~ 41 (426)
..|.|||+|-.|.++|..|++.|.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999974
No 333
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.27 E-value=0.045 Score=49.52 Aligned_cols=35 Identities=17% Similarity=0.315 Sum_probs=32.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
....|.|||.|-.|..+|..|++.|++|+++++.+
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34679999999999999999999999999999875
No 334
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.19 E-value=0.048 Score=48.64 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=30.7
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
.|.|||+|..|..+|..|++.|++|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998763
No 335
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.19 E-value=0.015 Score=55.70 Aligned_cols=34 Identities=15% Similarity=0.367 Sum_probs=31.6
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
+.|+|+|+|-.|..+|..|.+.|++|+|||+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4699999999999999999999999999999754
No 336
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.17 E-value=0.037 Score=51.08 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=32.0
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
|+....|.|||.|-.|..+|..|++.|++|+++++.+
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4455789999999999999999999999999999875
No 337
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.09 E-value=0.064 Score=48.59 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=31.4
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|-.|..+|..|++.|++|.++++.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999865
No 338
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.06 E-value=0.039 Score=49.89 Aligned_cols=32 Identities=28% Similarity=0.490 Sum_probs=30.2
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|.|||+|-.|..+|..|++.|++|+++++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 69999999999999999999999999999864
No 339
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.04 E-value=0.038 Score=49.58 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=30.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|-.|.++|..|++.|.+|++++|.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999874
No 340
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.03 E-value=0.041 Score=49.56 Aligned_cols=35 Identities=31% Similarity=0.484 Sum_probs=31.5
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
+...|.|||.|-.|..+|..|++.|++|+++++.+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34579999999999999999999999999999875
No 341
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.99 E-value=0.054 Score=51.53 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=31.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
..|.|||+|.-|..+|..|++.|++|+++|+.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5699999999999999999999999999999864
No 342
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.98 E-value=0.043 Score=51.69 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=31.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
..|+|||.|..|..+|..|.+.|++|++||+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4699999999999999999999999999998764
No 343
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.98 E-value=0.056 Score=50.36 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=31.7
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|+|+|+|++|+.+|..|...|.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999986
No 344
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.94 E-value=0.052 Score=49.27 Aligned_cols=34 Identities=26% Similarity=0.442 Sum_probs=31.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
...|+|||+|-.|..+|..|++.|+ +|+++|+.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3579999999999999999999999 999999864
No 345
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.91 E-value=0.043 Score=52.30 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=31.3
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
..|.|||.|++|+++|..|+++|++|+++|....
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 3699999999999999999999999999998764
No 346
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.84 E-value=0.032 Score=49.19 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=31.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|+|||||-+|...|..|.+.|.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4579999999999999999999999999998754
No 347
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.80 E-value=0.041 Score=50.00 Aligned_cols=34 Identities=26% Similarity=0.552 Sum_probs=31.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||.|-.|..+|..|++.|++|+++++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3579999999999999999999999999999875
No 348
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.66 E-value=0.05 Score=51.92 Aligned_cols=33 Identities=42% Similarity=0.541 Sum_probs=31.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999875
No 349
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.64 E-value=0.055 Score=47.18 Aligned_cols=34 Identities=26% Similarity=0.375 Sum_probs=31.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~ 43 (426)
..|+|||+|-.|..+|..|++.|. +++|+|++..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 579999999999999999999998 8999998753
No 350
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.60 E-value=0.051 Score=52.28 Aligned_cols=34 Identities=24% Similarity=0.540 Sum_probs=31.7
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 351
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.56 E-value=0.062 Score=51.55 Aligned_cols=34 Identities=29% Similarity=0.583 Sum_probs=31.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|.-|..+|..|++.|++|+++|+.+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3469999999999999999999999999999875
No 352
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.53 E-value=0.063 Score=51.65 Aligned_cols=34 Identities=32% Similarity=0.456 Sum_probs=31.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|.-|..+|..|++.|++|+++|+++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 353
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.47 E-value=0.062 Score=52.60 Aligned_cols=33 Identities=21% Similarity=0.141 Sum_probs=30.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
-.++|||||..|+-+|..+++.|.+|+|+++..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 479999999999999999999999999999854
No 354
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.47 E-value=0.074 Score=48.28 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=31.7
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
.....|.|||+|..|.++|..|+..|+ +++++|..+
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 345689999999999999999999998 899999853
No 355
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.43 E-value=0.075 Score=48.11 Aligned_cols=34 Identities=24% Similarity=0.462 Sum_probs=31.4
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
...|.|||.|..|.++|..|++.|+ +|.++|+.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3579999999999999999999999 999999875
No 356
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.41 E-value=0.061 Score=49.65 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=31.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.-.|+|||+|.+|+.+|..|...|.+|+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999875
No 357
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.41 E-value=0.072 Score=48.29 Aligned_cols=40 Identities=18% Similarity=0.197 Sum_probs=31.9
Q ss_pred CCCCCCCcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCC
Q 014377 2 YDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPS 41 (426)
Q Consensus 2 ~~~~~~~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~ 41 (426)
-...+.....|.|||+|..|.++|+.|+..|+ ++.|+|..
T Consensus 2 ~~~~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 2 ASITDKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp -----CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cccccCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34455666789999999999999999999888 89999985
No 358
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.39 E-value=0.069 Score=50.46 Aligned_cols=36 Identities=28% Similarity=0.569 Sum_probs=32.9
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
.-.|+|||||+.|+-+|..|++.|.+|+++|+.+..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 347999999999999999999999999999998764
No 359
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.38 E-value=0.079 Score=48.44 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=32.3
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
+....|.|||.|..|.++|..|.+.|++|.++++++
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 334579999999999999999999999999999875
No 360
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.35 E-value=0.021 Score=48.89 Aligned_cols=34 Identities=12% Similarity=0.295 Sum_probs=30.9
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDP 40 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~ 40 (426)
++...|.|||.|..|.++|..|++.|++|+++++
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 3446899999999999999999999999999987
No 361
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.34 E-value=0.056 Score=51.79 Aligned_cols=36 Identities=22% Similarity=0.354 Sum_probs=32.9
Q ss_pred CcCcEEEECchHHHHHHHHHHHHC-CC-cEEEEcCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEA-GL-SVCSIDPSPK 43 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~-G~-~V~liE~~~~ 43 (426)
+...|.|||+|-.|+.+|..|++. |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 345799999999999999999999 99 9999999875
No 362
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.29 E-value=0.06 Score=48.08 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=30.6
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.-.|.|||+|.-|..+|..|+ .|++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 457999999999999999999 999999999875
No 363
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.21 E-value=0.091 Score=47.63 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=31.8
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
....|.|||+|-.|.++|..|+..|+ +|+|+|..+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 34689999999999999999999999 999999875
No 364
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.13 E-value=0.033 Score=48.01 Aligned_cols=34 Identities=6% Similarity=0.102 Sum_probs=30.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..-.|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 44579999999999999999999999 99999875
No 365
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.01 E-value=0.088 Score=47.46 Aligned_cols=32 Identities=25% Similarity=0.434 Sum_probs=29.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|-.|.++|..|+ .|.+|++++|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999864
No 366
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.99 E-value=0.1 Score=49.85 Aligned_cols=40 Identities=23% Similarity=0.241 Sum_probs=36.7
Q ss_pred CCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 5 SKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 5 ~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
.|+.++||+|||||++||++|..|++.|++|+|+|+++..
T Consensus 7 ~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 7 TIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHY 46 (453)
T ss_dssp CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred hccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4556799999999999999999999999999999998765
No 367
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.98 E-value=0.093 Score=47.23 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=29.9
Q ss_pred cEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
.|+|||+|-.|..+|..|+..|+ +|+++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999864
No 368
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.98 E-value=0.093 Score=47.98 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=31.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
++..|.|||+|--|..+|..|++.|.+|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45789999999999999999999999999999864
No 369
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.97 E-value=0.1 Score=47.31 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=30.9
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
....|.|||+|-.|.++|..|+..|+ +|+++|..+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35789999999999999999999998 899999875
No 370
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.97 E-value=0.034 Score=43.86 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=30.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|+|||+|..|..+|..|++.|.+|+++++.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 479999999999999999999999999999864
No 371
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.93 E-value=0.099 Score=47.51 Aligned_cols=36 Identities=19% Similarity=0.355 Sum_probs=31.2
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCC----CcEEEEcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAG----LSVCSIDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G----~~V~liE~~~ 42 (426)
+....|.|||+|-.|..+|..|++.| .+|.++++.+
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 33457999999999999999999999 7999999875
No 372
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.81 E-value=0.1 Score=46.43 Aligned_cols=33 Identities=18% Similarity=0.532 Sum_probs=30.6
Q ss_pred CcEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+ |-.|..+|..|++.|++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999864
No 373
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.77 E-value=0.11 Score=46.95 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.7
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
....|.|||+|..|.++|+.|+..|+ +|.++|..+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 44689999999999999999998876 899999864
No 374
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.76 E-value=0.064 Score=48.10 Aligned_cols=33 Identities=24% Similarity=0.468 Sum_probs=30.6
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|..|..+|..|++.|++|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 375
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.74 E-value=0.066 Score=48.43 Aligned_cols=31 Identities=29% Similarity=0.336 Sum_probs=29.3
Q ss_pred CcEEEECchHHHHHHHHHHHHC-----C-CcEEEEcC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA-----G-LSVCSIDP 40 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~-----G-~~V~liE~ 40 (426)
..|.|||+|..|..+|..|++. | .+|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999998 9 99999987
No 376
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.73 E-value=0.088 Score=45.71 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=31.7
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
....|.|||+|-.|..+|..|++.|++|+++++++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34679999999999999999999999999999875
No 377
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.73 E-value=0.092 Score=49.25 Aligned_cols=34 Identities=32% Similarity=0.500 Sum_probs=31.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.-.|+|+|+|.+|+.+|..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999875
No 378
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.72 E-value=0.089 Score=47.57 Aligned_cols=34 Identities=26% Similarity=0.451 Sum_probs=30.9
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
...|.|||.|-.|..+|..|++.|+ +|+++++.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 4689999999999999999999999 999999863
No 379
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.72 E-value=0.082 Score=47.94 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=29.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|-.|.++|..|++.|.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 457999999999999999999999999999 653
No 380
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.71 E-value=0.062 Score=51.64 Aligned_cols=34 Identities=15% Similarity=0.342 Sum_probs=30.9
Q ss_pred cCcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~ 42 (426)
...|.|||.|-.|+.+|..|++. |++|+++|+++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 35799999999999999999998 89999999864
No 381
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.69 E-value=0.13 Score=46.67 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=31.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
...|.|||+|..|.++|..|+..|+ +|.++|..+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3579999999999999999999988 999999875
No 382
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.68 E-value=0.1 Score=46.44 Aligned_cols=33 Identities=33% Similarity=0.487 Sum_probs=30.8
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
.|.|||.|-.|..+|..|++.|++|+++++.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998753
No 383
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.66 E-value=0.068 Score=49.57 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=30.2
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|.|||+|-.|..+|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 384
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.61 E-value=0.13 Score=43.64 Aligned_cols=34 Identities=18% Similarity=0.369 Sum_probs=30.6
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|-.|..+|..|++.|++|.++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 385
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.59 E-value=0.16 Score=45.50 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=30.6
Q ss_pred CcEEEEC-chHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVG-GGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvG-gG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.||| +|-.|.++|..|++.|++|.++++.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4699999 99999999999999999999999865
No 386
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.53 E-value=0.12 Score=48.31 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=31.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.-.|+|+|+|.+|+.+|..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999875
No 387
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.52 E-value=0.12 Score=49.02 Aligned_cols=36 Identities=28% Similarity=0.428 Sum_probs=33.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
....+.|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346799999999999999999999999999999865
No 388
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.51 E-value=0.17 Score=47.07 Aligned_cols=36 Identities=31% Similarity=0.599 Sum_probs=32.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
+...|+|+|+|..|..++..+.+.|++|.++++.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 456799999999999999999999999999998764
No 389
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.49 E-value=0.12 Score=48.92 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=32.1
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.+..|.|||.|-.|+.+|..|++.|++|+.+|-++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 45689999999999999999999999999999764
No 390
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.45 E-value=0.12 Score=46.86 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=30.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
....|+|||+|-.|.++|..|+..|+ ++.++|..+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 45789999999999999999998885 899999753
No 391
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.36 E-value=0.13 Score=46.29 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=30.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
..|.|||+|-.|..+|..|+..|+ +|+++|..+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999864
No 392
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.35 E-value=0.092 Score=49.52 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=30.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|-.|+.+|..|++ |++|+++|+.+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3579999999999999999998 99999999875
No 393
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.34 E-value=0.13 Score=46.33 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=29.4
Q ss_pred cEEEECchHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~ 42 (426)
.|.|||+|-.|..+|..|++. |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 689999999999999999985 78999999975
No 394
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.33 E-value=0.095 Score=48.47 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=30.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
-.|+|+|+|.+|+.++..|...|.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 395
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.25 E-value=0.081 Score=47.46 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=31.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|-.|..+|..|++.|++|.++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999864
No 396
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.21 E-value=0.088 Score=50.75 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=30.3
Q ss_pred CcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~ 42 (426)
..|.|||.|-.|+.+|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 79999999864
No 397
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.17 E-value=0.11 Score=46.13 Aligned_cols=33 Identities=15% Similarity=0.287 Sum_probs=30.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|+|.|+|..|..++..|.+.|++|+++.|.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999999865
No 398
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.13 E-value=0.076 Score=48.94 Aligned_cols=34 Identities=24% Similarity=0.223 Sum_probs=31.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCC-------CcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAG-------LSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G-------~~V~liE~~~~ 43 (426)
..|.|||+|-.|.++|..|++.| .+|.++++.+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999998764
No 399
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.07 E-value=0.16 Score=44.51 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=31.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCC----CcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAG----LSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G----~~V~liE~~~~ 43 (426)
..|.|||+|-.|..+|..|++.| .+|.++++.+.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999998764
No 400
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.06 E-value=0.085 Score=50.21 Aligned_cols=32 Identities=28% Similarity=0.384 Sum_probs=30.1
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999864
No 401
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.05 E-value=0.16 Score=48.64 Aligned_cols=35 Identities=20% Similarity=0.463 Sum_probs=32.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
..+|.|||.|--|..+|..|++.|++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998753
No 402
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.93 E-value=0.11 Score=46.38 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=30.4
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|.|||.|-.|..+|..|++.|++|+++++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 69999999999999999999999999999875
No 403
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.85 E-value=0.12 Score=48.04 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=30.7
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
-.|+|+|+|..|..+|..|+..|.+|+++|+.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999864
No 404
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.76 E-value=0.13 Score=49.60 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=31.8
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
+.+.+|.|||+|.-|..+|..|++.|++|.++++.+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 455689999999999999999999999999999864
No 405
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.73 E-value=0.2 Score=44.35 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=31.3
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
..|+|.|+|..|..++..|.+.|++|+++.|.+.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3699999999999999999999999999998764
No 406
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.69 E-value=0.13 Score=46.87 Aligned_cols=30 Identities=20% Similarity=0.337 Sum_probs=28.8
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDP 40 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~ 40 (426)
.|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 407
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.67 E-value=0.14 Score=46.50 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.5
Q ss_pred CcEEEECchHHHHH-HHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLA-VAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~-~A~~La~~G~~V~liE~~~~ 43 (426)
..|.|||.|.+|++ +|..|.++|++|.+.|+.+.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 36999999999996 88999999999999998763
No 408
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.61 E-value=0.17 Score=42.98 Aligned_cols=34 Identities=21% Similarity=0.447 Sum_probs=30.9
Q ss_pred CcEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
..|+|.|| |..|..++..|.+.|++|.++.|.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 46999996 99999999999999999999999753
No 409
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.58 E-value=0.13 Score=46.59 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=31.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCC-CcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAG-LSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G-~~V~liE~~~ 42 (426)
..|.|||.|-.|..+|..|++.| ++|+++++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 47999999999999999999999 9999999875
No 410
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=91.56 E-value=0.17 Score=45.75 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=32.1
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
|.....|.|||+|-.|.++|+.|+..++ ++.|+|..+
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 4556799999999999999999998887 899999753
No 411
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.55 E-value=0.11 Score=46.64 Aligned_cols=33 Identities=24% Similarity=0.345 Sum_probs=30.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|-.|..+|..|++.|++|+++++.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999874
No 412
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.47 E-value=0.15 Score=45.07 Aligned_cols=32 Identities=22% Similarity=0.365 Sum_probs=29.8
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|.|||+|-.|.++|..|++.|++|.++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998864
No 413
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=91.46 E-value=3.8 Score=42.30 Aligned_cols=41 Identities=17% Similarity=0.173 Sum_probs=34.4
Q ss_pred CcEEE-EEEEEEEEEeCCeEEEEEcC------CcEEEcCEEEECCCCC
Q 014377 109 GVKFH-QAKVIKVIHEESKSLLICND------GVTIQAAVVLDATGFS 149 (426)
Q Consensus 109 gv~~~-~~~v~~i~~~~~~~~v~~~~------g~~i~a~~vV~AdG~~ 149 (426)
+++++ +++|++|..+++++.|++.+ +++++||.||.|....
T Consensus 581 ~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~ 628 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLG 628 (852)
T ss_dssp TCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHH
T ss_pred CCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHH
Confidence 45678 99999999999999888765 5689999999998643
No 414
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.43 E-value=0.19 Score=44.40 Aligned_cols=33 Identities=15% Similarity=0.219 Sum_probs=30.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|+|+|+|-+|.++|..|++.|.+|++++|.+
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999998763
No 415
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=91.41 E-value=0.21 Score=48.20 Aligned_cols=35 Identities=17% Similarity=0.478 Sum_probs=32.3
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
+...|.|||.|.-|..+|..|++.|++|+++++.+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999875
No 416
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=91.40 E-value=0.77 Score=43.40 Aligned_cols=48 Identities=10% Similarity=0.101 Sum_probs=35.7
Q ss_pred HHHHHHHhCCcEEE-EEEEEEEEEeCCeEEEEEcCC--cEEEcCEEEECCCCC
Q 014377 100 KMLQKCITNGVKFH-QAKVIKVIHEESKSLLICNDG--VTIQAAVVLDATGFS 149 (426)
Q Consensus 100 ~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vV~AdG~~ 149 (426)
.+.+...+.|++++ +++|++++ ++++.+...+| +++.+|+||.|.|..
T Consensus 205 ~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 205 LVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccCC
Confidence 44455567899999 99999885 44566665554 579999999998854
No 417
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.39 E-value=0.21 Score=43.81 Aligned_cols=34 Identities=24% Similarity=0.418 Sum_probs=31.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|+|+|+|-+|.++|..|++.|.+|+|+.|.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3479999999999999999999999999998875
No 418
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.34 E-value=0.14 Score=47.59 Aligned_cols=34 Identities=29% Similarity=0.467 Sum_probs=31.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.-.|+|+|+|..|..+|..+...|.+|+++|+.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 419
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.33 E-value=0.15 Score=48.58 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=30.9
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.-.|+|+|+|..|..+|..|+..|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3469999999999999999999999999999864
No 420
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.29 E-value=0.14 Score=45.75 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=29.6
Q ss_pred cEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
.|.|||+|-.|.++|..|++.|+ +|+++|..+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 59999999999999999999998 899999864
No 421
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=91.28 E-value=0.24 Score=43.88 Aligned_cols=33 Identities=18% Similarity=0.456 Sum_probs=30.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCC---cEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGL---SVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~---~V~liE~~~ 42 (426)
..|.|||+|--|.++|..|.+.|+ +|.++++++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999999 999999875
No 422
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.23 E-value=0.25 Score=44.70 Aligned_cols=35 Identities=29% Similarity=0.279 Sum_probs=31.3
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
+...|.|||+|..|..+|+.|+..|+ +|+++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 34689999999999999999999998 899999854
No 423
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.21 E-value=0.2 Score=46.19 Aligned_cols=34 Identities=29% Similarity=0.544 Sum_probs=31.2
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
.|+|+|||..|..+|..+.+.|++|+++|+++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 5999999999999999999999999999987653
No 424
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.21 E-value=0.2 Score=49.45 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=32.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
-.|+|+|+|..|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 67999999999999999999999999999998764
No 425
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.18 E-value=0.17 Score=45.81 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=29.8
Q ss_pred cEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
.|.|||+|-.|.++|..|++.|+ +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999864
No 426
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.02 E-value=0.19 Score=42.32 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=29.7
Q ss_pred cEEEEC-chHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVG-GGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvG-gG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|.||| +|-.|..+|..|++.|++|.++++.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999864
No 427
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.98 E-value=0.19 Score=46.33 Aligned_cols=35 Identities=34% Similarity=0.528 Sum_probs=31.8
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
.+..|+|+|||-||..+|..|...|. +|.++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45789999999999999999999999 999999874
No 428
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.97 E-value=0.13 Score=48.25 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=29.1
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|.|||+|-.|+.+|..|++ |++|+++++.+
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999864
No 429
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.93 E-value=0.22 Score=50.58 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=31.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|.-|..+|..|++.|++|+++|+.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999875
No 430
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.85 E-value=0.24 Score=45.00 Aligned_cols=40 Identities=18% Similarity=0.210 Sum_probs=32.1
Q ss_pred CCCCCCcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 3 DPSKGLVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 3 ~~~~~~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
+-.......|.|||+|-.|.++|+.|+..++ ++.|+|..+
T Consensus 3 ~~~~~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 3 SITDKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp ---CCCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred ccccCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3344556799999999999999999998876 899999853
No 431
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.78 E-value=0.21 Score=44.99 Aligned_cols=32 Identities=28% Similarity=0.489 Sum_probs=29.7
Q ss_pred cEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
.|.|||+|..|.++|..|++.|+ +++++|..+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 58999999999999999999888 899999875
No 432
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.77 E-value=0.24 Score=42.98 Aligned_cols=33 Identities=15% Similarity=0.338 Sum_probs=30.5
Q ss_pred CcEEEECchHHHHHHHHHHHHCCC----cEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGL----SVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~----~V~liE~~~ 42 (426)
..|.|||+|-.|..+|..|.+.|+ +|.++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 369999999999999999999998 999999864
No 433
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.76 E-value=0.17 Score=44.33 Aligned_cols=32 Identities=22% Similarity=0.393 Sum_probs=29.6
Q ss_pred cEEEECchHHHHHHHHHHHHCC-CcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAG-LSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G-~~V~liE~~~ 42 (426)
.|.|||+|-.|..+|..|++.| .+|.++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999864
No 434
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.74 E-value=0.19 Score=46.62 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=31.1
Q ss_pred CcEEEECchHHHHHHHHHHHHCC-------CcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAG-------LSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G-------~~V~liE~~~~ 43 (426)
..|.|||+|-.|..+|..|++.| .+|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 36999999999999999999999 99999998754
No 435
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.72 E-value=0.26 Score=47.53 Aligned_cols=33 Identities=21% Similarity=0.505 Sum_probs=30.8
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.+|.|||+|-.|..+|..|++.|++|.++++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999865
No 436
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.67 E-value=0.22 Score=44.69 Aligned_cols=34 Identities=35% Similarity=0.601 Sum_probs=30.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
...|.|||+|-.|..+|+.|+..|+ +|+|+|..+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3689999999999999999999998 999999876
No 437
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.65 E-value=0.23 Score=44.20 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=31.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~ 43 (426)
...|+|||+|-.|+.+|..|++.|+ +++|+|.+..
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4689999999999999999999997 8999998753
No 438
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=90.63 E-value=0.33 Score=45.31 Aligned_cols=35 Identities=26% Similarity=0.553 Sum_probs=31.7
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
.-.|+|+|+|..|..+|..+.+.|++|.+++..+.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 34799999999999999999999999999998654
No 439
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.59 E-value=0.22 Score=44.47 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=29.9
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|.|||+|-.|..+|..|++.|++|.++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999865
No 440
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=90.59 E-value=0.23 Score=47.71 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=31.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
+.+|.|||+|-.|..+|..|++.|++|.++++.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3579999999999999999999999999999864
No 441
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.57 E-value=0.2 Score=44.40 Aligned_cols=32 Identities=25% Similarity=0.489 Sum_probs=29.6
Q ss_pred cEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
.|.|||+|..|.++|..|++.|+ +|.++++.+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899999864
No 442
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.49 E-value=0.26 Score=49.91 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=31.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|.-|..+|..|++.|++|+++|+.+
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3469999999999999999999999999999875
No 443
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.49 E-value=0.21 Score=43.89 Aligned_cols=34 Identities=15% Similarity=0.280 Sum_probs=30.7
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCc-EEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLS-VCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~-V~liE~~~ 42 (426)
...|.|||+|-.|..+|..|++.|++ |.++++.+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35799999999999999999999999 89999864
No 444
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.47 E-value=0.23 Score=44.46 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=30.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
..|+|+|+|.+|..+|..|++.|. +|+|+.|.+
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999998 899998864
No 445
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=90.47 E-value=0.13 Score=47.18 Aligned_cols=43 Identities=19% Similarity=0.067 Sum_probs=34.7
Q ss_pred CCCCCCCCcCcEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 1 MYDPSKGLVVDLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 1 ~~~~~~~~~~dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
|+++.+.....|+|.|| |..|..++..|.+.|++|.++.|.+.
T Consensus 1 mi~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 44 (357)
T 1rkx_A 1 MINNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAP 44 (357)
T ss_dssp -CCHHHHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCS
T ss_pred CCCchhhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCc
Confidence 55554444457999996 99999999999999999999998653
No 446
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.45 E-value=0.28 Score=44.54 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=31.3
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~ 43 (426)
...|+|||+|-.|+.+|..|++.|. +++|+|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 4679999999999999999999998 7889998754
No 447
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.45 E-value=0.24 Score=42.40 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=31.0
Q ss_pred cCcEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|+|.|| |-.|..++..|.+.|++|+++.|.+
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 456999998 9999999999999999999999875
No 448
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.22 E-value=0.29 Score=41.22 Aligned_cols=32 Identities=22% Similarity=0.472 Sum_probs=29.5
Q ss_pred cEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|+|.|| |-.|..++..|.++|++|.++.|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4899996 9999999999999999999999875
No 449
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.20 E-value=0.38 Score=43.61 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=31.6
Q ss_pred CCcCcEEEECchHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 7 GLVVDLAVVGGGPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 7 ~~~~dViIvGgG~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
.....|.|||+|-.|.++|+.|+..|+ +++|+|...
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 345789999999999999999999988 899999753
No 450
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.16 E-value=0.33 Score=44.31 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=30.5
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|-.|.++|..|++.|++|+++++.+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999875
No 451
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.15 E-value=0.22 Score=47.54 Aligned_cols=33 Identities=27% Similarity=0.282 Sum_probs=30.6
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPS 41 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~ 41 (426)
...|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 356999999999999999999999999999975
No 452
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.14 E-value=0.23 Score=43.20 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=31.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~ 43 (426)
...|+|||+|-.|..+|..|++.|+ +++|+|.+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 3579999999999999999999998 7899998753
No 453
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=90.11 E-value=0.39 Score=44.53 Aligned_cols=37 Identities=30% Similarity=0.216 Sum_probs=33.6
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 44 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~ 44 (426)
+...++|+|||..|..+|..++..|++|+|+|.++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 4578999999999999999999999999999987653
No 454
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.11 E-value=0.22 Score=47.77 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=31.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.-.|+|||.|..|..+|..|...|.+|+++|+.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3569999999999999999999999999999864
No 455
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.05 E-value=0.26 Score=45.40 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=31.4
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPS 41 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~ 41 (426)
.+..|+|+|+|-+|..+|..|...|. +|.++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45789999999999999999999998 79999997
No 456
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.04 E-value=0.25 Score=47.56 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=30.2
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
+|.|||+|-.|..+|..|++.|++|.++++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 457
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.03 E-value=0.17 Score=45.25 Aligned_cols=33 Identities=24% Similarity=0.404 Sum_probs=27.4
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
.|-+||-|.-|..+|..|.+.|++|+++++.+.
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 699999999999999999999999999998764
No 458
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=90.00 E-value=0.42 Score=45.07 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=32.0
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
+...|+|+|||..|..++..+.+.|++|.++|..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 345799999999999999999999999999997654
No 459
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.91 E-value=0.17 Score=47.55 Aligned_cols=30 Identities=20% Similarity=0.396 Sum_probs=27.9
Q ss_pred cEEEECchHHHHHHHHHHHH-CCCcEEEEcC
Q 014377 11 DLAVVGGGPAGLAVAQQVSE-AGLSVCSIDP 40 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~-~G~~V~liE~ 40 (426)
.|.|||+|-.|.++|..|++ .|.+|+++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 69999999999999999998 5999999983
No 460
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=89.91 E-value=0.25 Score=46.25 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.-.|+|+|.|..|..+|..|...|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3579999999999999999999999999999864
No 461
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.86 E-value=0.36 Score=43.36 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=31.8
Q ss_pred cCcEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 9 VVDLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
...|+|.|| |..|..++..|.+.|++|+++.|.+.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 357999999 99999999999999999999998764
No 462
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.83 E-value=0.34 Score=40.25 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.4
Q ss_pred CcEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|+|.|| |-.|..++..|.+.|++|.++.|.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999999 9999999999999999999999875
No 463
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.77 E-value=0.27 Score=44.31 Aligned_cols=32 Identities=28% Similarity=0.420 Sum_probs=29.5
Q ss_pred cEEEECchHHHHHHHHHHHHCC--CcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAG--LSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G--~~V~liE~~~ 42 (426)
.|.|||+|-.|.++|..|++.| .+|+++|+.+
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999864
No 464
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.73 E-value=0.26 Score=43.55 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=30.8
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
...++|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3479999999999999999999999 899998874
No 465
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.71 E-value=0.23 Score=44.05 Aligned_cols=31 Identities=16% Similarity=0.290 Sum_probs=29.0
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|.|||+|-.|..+|..|++ |++|.++++.+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 59999999999999999999 99999999865
No 466
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.47 E-value=0.29 Score=43.23 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=30.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|+|||+|-+|.++|..|.+.|.+|++++|.+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999998863
No 467
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=89.41 E-value=0.4 Score=45.44 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=31.9
Q ss_pred CcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 8 LVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 8 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
+...|+|+|+|..|..++..+.+.|++|.+++..+.
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYAN 53 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 345799999999999999999999999999998654
No 468
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.35 E-value=0.33 Score=43.30 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=31.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||.|..|..+|..|...|.+|+++++.+
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3569999999999999999999999999999864
No 469
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=89.34 E-value=0.39 Score=44.75 Aligned_cols=40 Identities=20% Similarity=0.350 Sum_probs=34.2
Q ss_pred CCCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 4 PSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 4 ~~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
|+..+...|+|+|+|..|..++..+.+.|++|.+++..+.
T Consensus 6 pm~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 6 ALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp TTSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 4444557899999999999999999999999999998754
No 470
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.30 E-value=0.44 Score=43.44 Aligned_cols=35 Identities=31% Similarity=0.483 Sum_probs=30.5
Q ss_pred CcCcEEEECc-hHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014377 8 LVVDLAVVGG-GPAGLAVAQQVSEAGL--SVCSIDPSP 42 (426)
Q Consensus 8 ~~~dViIvGg-G~aGl~~A~~La~~G~--~V~liE~~~ 42 (426)
....|+|||+ |-.|.++|+.++..|+ +|+|+|...
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 3468999998 9999999999999885 899999753
No 471
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.28 E-value=0.37 Score=40.75 Aligned_cols=32 Identities=31% Similarity=0.550 Sum_probs=29.6
Q ss_pred cEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|+|.|| |-.|..++..|.+.|++|.++.|.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999998864
No 472
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.26 E-value=0.41 Score=41.66 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=30.0
Q ss_pred cEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
.++|||+|-+|.+++..|.+.|. +|.|++|.+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 999999864
No 473
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.25 E-value=0.24 Score=43.68 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=30.3
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|+|+|+|-+|..+|..|++.|.+|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999998864
No 474
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=89.18 E-value=0.37 Score=45.21 Aligned_cols=36 Identities=19% Similarity=0.322 Sum_probs=32.2
Q ss_pred CCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 6 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 6 ~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
|++...|+|+|||..|..++..+.+.|++|.+++ .+
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 4456789999999999999999999999999999 54
No 475
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.17 E-value=0.35 Score=43.35 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=31.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||+|..|..+|..|...|.+|+++++.+
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4569999999999999999999999999999864
No 476
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.09 E-value=0.41 Score=42.62 Aligned_cols=33 Identities=30% Similarity=0.445 Sum_probs=30.5
Q ss_pred cEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 11 DLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 11 dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
.|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 5999999 99999999999999999999988764
No 477
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.91 E-value=0.41 Score=42.44 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=30.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
.-.|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3479999999999999999999999 699998863
No 478
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=88.88 E-value=0.26 Score=44.76 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=29.3
Q ss_pred cCcEEEECc-hHHHHHHHHHHHHCCC-------cEEEEcCC
Q 014377 9 VVDLAVVGG-GPAGLAVAQQVSEAGL-------SVCSIDPS 41 (426)
Q Consensus 9 ~~dViIvGg-G~aGl~~A~~La~~G~-------~V~liE~~ 41 (426)
...|+|+|| |..|..++..|.+.|+ +|.++|+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 347999998 9999999999999886 89999975
No 479
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.85 E-value=0.46 Score=41.59 Aligned_cols=32 Identities=44% Similarity=0.571 Sum_probs=29.7
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
.|+|||+|-+|..+|..|.+.|.+|++++|.+
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999998763
No 480
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.84 E-value=0.34 Score=44.53 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=31.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~ 43 (426)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4579999999999999999999998 7999998753
No 481
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=88.80 E-value=0.3 Score=45.19 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=28.8
Q ss_pred CCCCCCCcCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 2 YDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 2 ~~~~~~~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
++.+...+..|+|+|+|-.|..+|..|++ ..+|++.++..
T Consensus 9 ~~~~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~ 48 (365)
T 3abi_A 9 HHHIEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNN 48 (365)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCH
T ss_pred cccccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCH
Confidence 44555567789999999999999999976 57899988753
No 482
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=88.75 E-value=0.51 Score=42.83 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=31.4
Q ss_pred CcCcEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 8 LVVDLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 8 ~~~dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
....|+|.|| |-.|..++..|++.|++|+++.+.+.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 3457999996 99999999999999999999998654
No 483
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=88.75 E-value=0.37 Score=48.83 Aligned_cols=35 Identities=31% Similarity=0.597 Sum_probs=32.0
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
.-.|.|||+|.-|.-.|..+++.|++|+++|..+.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 45799999999999999999999999999998753
No 484
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=88.72 E-value=0.43 Score=42.88 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=28.9
Q ss_pred cEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
.|.|||+|-.|..+|..|+..|+ +|.|+|..+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999998888 699999864
No 485
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.70 E-value=0.25 Score=46.66 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=31.4
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
...-|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 5688999999999999999999999999998753
No 486
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=88.59 E-value=0.56 Score=39.60 Aligned_cols=32 Identities=6% Similarity=0.168 Sum_probs=28.9
Q ss_pred cEEEECc-hHHHHHHHHHHH-HCCCcEEEEcCCC
Q 014377 11 DLAVVGG-GPAGLAVAQQVS-EAGLSVCSIDPSP 42 (426)
Q Consensus 11 dViIvGg-G~aGl~~A~~La-~~G~~V~liE~~~ 42 (426)
.|+|.|| |-.|..+|..|+ +.|++|+++.|++
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3999995 999999999999 8999999999874
No 487
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=88.55 E-value=0.41 Score=43.04 Aligned_cols=34 Identities=15% Similarity=0.251 Sum_probs=30.6
Q ss_pred CcEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 10 VDLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 10 ~dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
..|+|.|| |-.|..++..|.+.|++|.++.|.+.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 36999997 99999999999999999999998763
No 488
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=88.51 E-value=0.31 Score=42.55 Aligned_cols=33 Identities=12% Similarity=0.226 Sum_probs=30.2
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
..|.|||+|-.|..+|..|++.|.+|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 379999999999999999999999999999864
No 489
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.51 E-value=0.41 Score=43.06 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=30.4
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
.-.++|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3469999999999999999999999 899998863
No 490
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.48 E-value=0.32 Score=43.26 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=29.0
Q ss_pred CcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
-.++|+|+|-+|.++|..|++.| +|++++|..
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 46999999999999999999999 999998753
No 491
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=88.32 E-value=0.41 Score=43.83 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=31.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~ 43 (426)
...|+|||+|-.|+.+|..|++.|+ +++|+|.+..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 4579999999999999999999998 8999997653
No 492
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.29 E-value=0.5 Score=43.04 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.9
Q ss_pred cCcEEEECc-hHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014377 9 VVDLAVVGG-GPAGLAVAQQVSEAGLSVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGg-G~aGl~~A~~La~~G~~V~liE~~~~ 43 (426)
...|+|.|| |..|..++..|.+.|++|.++.+.+.
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 457999999 99999999999999999999998764
No 493
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.02 E-value=0.34 Score=43.04 Aligned_cols=33 Identities=15% Similarity=0.239 Sum_probs=29.5
Q ss_pred CcEEEECchHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014377 10 VDLAVVGGGPAGLAVAQQVSEA--GLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~ 42 (426)
..|.|||+|-.|..+|..|++. |.+|.++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4799999999999999999987 67999998864
No 494
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.99 E-value=0.39 Score=41.95 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=28.0
Q ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEcC
Q 014377 11 DLAVVGGGPAGLAVAQQVSEAGLSVCSIDP 40 (426)
Q Consensus 11 dViIvGgG~aGl~~A~~La~~G~~V~liE~ 40 (426)
.|.|||+|-.|..+|..|++.|++|.++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999866
No 495
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.94 E-value=0.61 Score=41.59 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=28.9
Q ss_pred CcEEEECch---HHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 10 VDLAVVGGG---PAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 10 ~dViIvGgG---~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
--++|.||+ -.|..+|..|++.|.+|+++++..
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 458999985 789999999999999999998863
No 496
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=87.91 E-value=0.54 Score=41.37 Aligned_cols=34 Identities=15% Similarity=0.115 Sum_probs=30.1
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
.-.++|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4579999999999999999999996 899998763
No 497
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=87.84 E-value=0.33 Score=44.12 Aligned_cols=33 Identities=12% Similarity=0.261 Sum_probs=29.5
Q ss_pred cCcEEEECc-hHHHHHHHHHHHHCCC-------cEEEEcCC
Q 014377 9 VVDLAVVGG-GPAGLAVAQQVSEAGL-------SVCSIDPS 41 (426)
Q Consensus 9 ~~dViIvGg-G~aGl~~A~~La~~G~-------~V~liE~~ 41 (426)
...|+|+|| |-.|..++..|...|+ +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 468999998 9999999999998886 79999876
No 498
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=87.68 E-value=0.52 Score=46.13 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=31.5
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSPK 43 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~ 43 (426)
...|+|||+|-.|+.+|..|++.|. +++|+|.+..
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 4579999999999999999999998 7899998764
No 499
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.49 E-value=0.6 Score=42.49 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=31.2
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCCcEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 42 (426)
...|.|||.|-.|..+|..|+..|.+|.++++.+
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 3469999999999999999999999999999865
No 500
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=87.49 E-value=0.44 Score=44.72 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=30.4
Q ss_pred cCcEEEECchHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014377 9 VVDLAVVGGGPAGLAVAQQVSEAGL-SVCSIDPSP 42 (426)
Q Consensus 9 ~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~ 42 (426)
.-.|+|||+|..|..+|..|...|. +|+++++.+
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3469999999999999999999998 899998864
Done!