Citrus Sinensis ID: 014377

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420------

MYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHKLSAEVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELLVFGLSLFSHASNTSRLEIMAKGTLPLVNMINNLVQDTD

cccccccccEEEEEEcccHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccEEEEEEEEEEccccCEEccccCEEEEHHHHHHHHHHHHHHcccEEEEEEEEEEEEEcccEEEEEccccEEEEEEEEEccccccccHcccccccccccEEEEEEEEECccccccccEEEEEcccccccccHHHcccccccccEEEEEECcccEEEEEEEEECccccccHHHHHHHHHHHHHHccccccEEEEEEEEEcccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHcccc

******GLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHKLSAEVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELLVFGLSLFSHASNTSRLEIMAKGTLPLVNMINNL*****

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Lycopene beta cyclase, chloroplastic	Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene.	confident	Q38933
Lycopene beta cyclase, chloroplastic/chromoplastic	Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene.	confident	Q43415
Lycopene beta cyclase, chloroplastic	Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene.	probable	Q43578

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3ATR, chain A
Confidence level:very confident
Coverage over the Query: 6-191,204-385
View the alignment between query and template
View the model in PyMOL