BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014378
(426 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5HZ00|SPS3_ARATH Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=SPS3 PE=1 SV=1
Length = 422
Score = 605 bits (1560), Expect = e-172, Method: Compositional matrix adjust.
Identities = 306/431 (70%), Positives = 356/431 (82%), Gaps = 14/431 (3%)
Query: 1 MLIYRGLSRIS-RISKKTSF--GRRWLPSH--PLLSGASHSAAAAAADSSVKVLGCREAY 55
ML R ++RIS + + SF + L SH ++ HS + DS K CR Y
Sbjct: 1 MLFTRSVARISSKFLRNRSFYGSSQSLASHRFAIIPDQGHSCS----DSPHKGYVCRTTY 56
Query: 56 SWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLA 115
S P G HQ++HQSSS++E E+LDPFSLVADELS+L+ +LR MV+AEVPKLA
Sbjct: 57 SLKSPVFGGFSHQLYHQSSSLVE-----EELDPFSLVADELSLLSNKLREMVLAEVPKLA 111
Query: 116 SAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITE 175
SAAEYFFK GV+GK+FR T+LLLMATALNVRVPE L D + +ELR RQ+ IAEITE
Sbjct: 112 SAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAEITE 171
Query: 176 MIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTL 235
MIHVASLLHDDVLDDADTRRG+GSLN VMGNK++VLAGDFLLSRAC ALA+LKNTEVV L
Sbjct: 172 MIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVAL 231
Query: 236 LATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAI 295
LAT VEHLVTGETM++T+S++QR SMDYYMQKTYYKTASLISNSCKA+A+L GQTAEVA+
Sbjct: 232 LATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAV 291
Query: 296 LAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVV 355
LAF+YG+NLGLA+QLIDD+LDFTGTSASLGKGSLSDIRHG+ITAPILFAMEEFPQLR VV
Sbjct: 292 LAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFPQLREVV 351
Query: 356 EQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALL 415
+Q +D NVDIALEYLGKS+GIQ+ RELA++HANLAAAAI SLPE ++EDV +SRRAL+
Sbjct: 352 DQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRALI 411
Query: 416 DLTHRVITRNK 426
DLTHRVITRNK
Sbjct: 412 DLTHRVITRNK 422
>sp|Q653T6|SPS1_ORYSJ Solanesyl-diphosphate synthase 1, mitochondrial OS=Oryza sativa
subsp. japonica GN=SPS1 PE=1 SV=1
Length = 430
Score = 550 bits (1417), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/380 (71%), Positives = 323/380 (85%), Gaps = 5/380 (1%)
Query: 47 KVLGCREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSM 106
KV+GCR A S LH ++Q+ S S+EQ DPF LVADELS+LA RLRSM
Sbjct: 56 KVVGCRGATFVSSRWLHDAQYQVRQDGLS-----RSEEQQDPFELVADELSLLANRLRSM 110
Query: 107 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTR 166
V AEVPKLASAAEYFFK+G EGKRFRPTVLLLMA+AL + + GV LA +LRTR
Sbjct: 111 VAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSDSTEVGVLTILANKLRTR 170
Query: 167 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 226
QQ IAEITEMIHVASLLHDDVLDDADTRRG+ SLN +MGNKL+VLAGDFLLSRACVALA+
Sbjct: 171 QQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAA 230
Query: 227 LKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALL 286
L NTEVV+L+AT VEHLVTGETMQ++TS +QR SMDYY+QKTYYKTASLISNSCKA+A+L
Sbjct: 231 LGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAVAIL 290
Query: 287 AGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAME 346
AG TA+V++LA++YG+NLGLA+QLIDDVLDFTGTSASLGKGSL+DIRHGIITAP+L+AME
Sbjct: 291 AGHTADVSMLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPMLYAME 350
Query: 347 EFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDED 406
EFPQL VV++GF++ +NV++AL+YL KSRGI+KT+ELA +HAN A AI++LP+++DED
Sbjct: 351 EFPQLHEVVDRGFDNPANVELALDYLQKSRGIEKTKELAREHANRAIKAIEALPDSDDED 410
Query: 407 VTKSRRALLDLTHRVITRNK 426
V SRRAL+D+T RVITR K
Sbjct: 411 VLTSRRALIDITERVITRTK 430
>sp|Q7S565|COQ1_NEUCR Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU02305 PE=3 SV=1
Length = 449
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 232/394 (58%), Gaps = 44/394 (11%)
Query: 69 IHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEG 128
+++ + I+ TD +DP LVA E+ L +R ++ + P L AA+Y+ + EG
Sbjct: 64 VNNAVTKAIKGTDGLPTIDPLRLVAGEMKFLTGNIRKLLGSGHPSLDRAAKYYTQ--AEG 121
Query: 129 KRFRPTVLLLM--ATALNVRVPEPLHDGVEDALA-------------------------- 160
K RP ++LLM ATAL + P+ ++ + A
Sbjct: 122 KHVRPLIVLLMSRATALCPKAPQRQQSTLQASAAIDTSISPLNILSDFNPSDATPVSIPA 181
Query: 161 -TELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSR 219
T++ Q+ +AEITE+IH ASLLHDDV+D +++RRG S N GNK+AVLAGDFLL R
Sbjct: 182 DTDILPSQRRLAEITELIHTASLLHDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGR 241
Query: 220 ACVALASLKNTEVVTLLATVVEHLVTGETMQM-TTSSDQRC------SMDYYMQKTYYKT 272
A VALA L++ EVV LLATV+ +LV GE MQ+ T+ D++ ++ YY+QKTY KT
Sbjct: 242 ASVALARLRHAEVVELLATVIANLVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYLKT 301
Query: 273 ASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
ASLIS SC+A ALL G A A+ YGKNLGLA+QL+DD+LD+T + LGK + +D+
Sbjct: 302 ASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADL 361
Query: 333 RHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLA 392
G+ TAP+LFA + P+L +V + FE + A E + +S GI++TR LA +A A
Sbjct: 362 ELGLATAPLLFAWKTMPELGPLVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEKA 421
Query: 393 AAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 426
AI P++ +D L+++ + + RNK
Sbjct: 422 IEAISGFPDSEAKD------GLIEMAVKTLKRNK 449
>sp|Q33DR2|DPS1_MOUSE Decaprenyl-diphosphate synthase subunit 1 OS=Mus musculus GN=Pdss1
PE=1 SV=1
Length = 409
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 229/370 (61%), Gaps = 22/370 (5%)
Query: 60 PALHGIRHQIHHQSSSVI--EDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLAS 116
P +H I Q H ++ ++ T S E+ DPF L +L L + +R + +L
Sbjct: 59 PTMHSI-SQFHQRTPAMCSCRQTQSGEKYSDPFKLGWRDLKGLYEDIRKELHISTRELKD 117
Query: 117 AAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEM 176
+EY+F +GK FRP +++LMA A N+ H+ A E++ Q+ IA + EM
Sbjct: 118 MSEYYFDG--KGKAFRPIIVVLMARACNIH-----HNN-----AREMQASQRSIALVAEM 165
Query: 177 IHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLL 236
IH A+L+HDDV+DDA +RRG ++N + G K AVLAGD +LS A VALA + NT VV++L
Sbjct: 166 IHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSML 225
Query: 237 ATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAIL 296
A V+E LV GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +
Sbjct: 226 AQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 285
Query: 297 AFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVE 356
A+ YGKN+G+A+QLIDDVLDFT S +GK + +D++ GI T P+LFA ++FP++ ++
Sbjct: 286 AYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMNAMIM 345
Query: 357 QGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLD 416
+ F +VD A +Y+ +S G+Q+T LA ++ + A I L + + D AL+
Sbjct: 346 RRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLRPSTERD------ALIQ 399
Query: 417 LTHRVITRNK 426
L+ V+TR+K
Sbjct: 400 LSESVLTRDK 409
>sp|Q6CBH3|COQ1_YARLI Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COQ1
PE=3 SV=1
Length = 452
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 243/409 (59%), Gaps = 65/409 (15%)
Query: 72 QSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRF 131
Q+S ++E TD+ + DPFS+V+ E+S LA + S++ + P L A Y+F+ EGK
Sbjct: 55 QASRLVE-TDTPIR-DPFSIVSQEMSTLANNIGSLIGSGHPTLNKVATYYFQS--EGKHV 110
Query: 132 RPTVLLLMATAL--------------------NVRV--PEP-----------LHDGVE-- 156
RP ++LL++ AL NV PEP LH G+
Sbjct: 111 RPLIVLLLSRALSAIPESERDRGTFDASDVTENVGELNPEPSINDPLSPIEILH-GINPD 169
Query: 157 ----------DALATE---LRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFV 203
D L E + +Q+ +AEI EMIH ASLLHDDV+D++ TRRG + N
Sbjct: 170 IVLNPLSRPSDPLPYESNGILPKQRRLAEIVEMIHTASLLHDDVIDNSATRRGSPTGNVA 229
Query: 204 MGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQM------TTSSDQ 257
GNK+A+LAGDFLL RA VA+A L+N EV+ LL+T + +LV GE MQ+ +
Sbjct: 230 FGNKMAILAGDFLLGRASVAIARLRNAEVIELLSTTIANLVEGEFMQLKNTIVDNSEIAN 289
Query: 258 RCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDF 317
+ + +YY+ KTY KTASL+S SC+A A+L+G + ++ +GKNLGL +Q++DD+LD+
Sbjct: 290 KATFEYYIHKTYLKTASLMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDY 349
Query: 318 TGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRG 377
+ + LGK + +D++ G+ TAP+LFA E++P+L ++++ F+ +V+ A + ++ G
Sbjct: 350 SEGESHLGKPAGADLKLGLATAPVLFAWEKYPELGDMIKRKFDGPGDVERARFLVQQADG 409
Query: 378 IQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 426
+ +TRELA K+ + A A +D LP ++SR AL +LT +++ R+K
Sbjct: 410 LSRTRELAQKYCDEAVANLDLLP------YSESREALRNLTMKMMNRSK 452
>sp|Q54VJ9|DPS1_DICDI Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1
PE=3 SV=1
Length = 456
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 207/315 (65%), Gaps = 26/315 (8%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P L+S + Y+F++ +GKR RPT++LL++ AL++ + Q +A
Sbjct: 168 PILSSISSYYFEL--KGKRIRPTIVLLLS----------------KALSSTVHGSQLKLA 209
Query: 172 EITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTE 231
EI EMIH ASL+HDDV+D+A TRR + S+N NKLA+L GD+LL+RA V L++++N +
Sbjct: 210 EIVEMIHTASLVHDDVIDEASTRRDVISINHSYTNKLAILCGDYLLARASVVLSTIRNPD 269
Query: 232 VVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTA 291
V ++T + LV GE MQ S+ S D Y+QKTY KT SLI+NSC++ A+L+G +
Sbjct: 270 VTECMSTALAELVEGEFMQ--AKSNGVVSFDNYLQKTYLKTGSLITNSCRSAAILSGADS 327
Query: 292 EVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQL 351
+ ++ ++GKNLGLA+Q++DD+LD+TG++ GK + D+ G+ TAP+L+A +EFPQL
Sbjct: 328 NIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQL 387
Query: 352 RTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSR 411
++++ F + +V+ A + S+GI+KTR LA+++ N A ++ LP+ ++SR
Sbjct: 388 EKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLAIEYCNRAIQSLLKLPQ------SESR 441
Query: 412 RALLDLTHRVITRNK 426
L+ L+H V+TR K
Sbjct: 442 DLLITLSHIVVTRTK 456
>sp|Q5T2R2|DPS1_HUMAN Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1
PE=1 SV=1
Length = 415
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 219/360 (60%), Gaps = 21/360 (5%)
Query: 68 QIHHQSSSVIEDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGV 126
+ HH + T S E+ DPF L +L L + +R ++ +L +EY+F
Sbjct: 76 RFHHTTPD--SKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLISTSELKEMSEYYFDG-- 131
Query: 127 EGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDD 186
+GK FRP ++ LMA A N+ H ++ Q+ IA I EMIH ASL+HDD
Sbjct: 132 KGKAFRPIIVALMARACNIHHNNSRH----------VQASQRAIALIAEMIHTASLVHDD 181
Query: 187 VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTG 246
V+DDA +RRG ++N + G K AVLAGD +LS A +ALA + NT V+++L V+E LV G
Sbjct: 182 VIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRG 241
Query: 247 ETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGL 306
E +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN+G+
Sbjct: 242 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 301
Query: 307 AYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVD 366
A+QLIDDVLDFT S +GK + +D++ G+ T P+LFA ++FP++ ++ + F +VD
Sbjct: 302 AFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPGDVD 361
Query: 367 IALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 426
A +Y+ +S G+Q+T LA ++ + A I L + + D AL+ L+ V+TR+K
Sbjct: 362 RARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPERD------ALIQLSEIVLTRDK 415
>sp|P72580|PREA_SYNY3 Prenyl transferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=preA PE=3 SV=2
Length = 323
Score = 244 bits (624), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 137/336 (40%), Positives = 208/336 (61%), Gaps = 22/336 (6%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F+ V +L +L L+ +V A P L +AAE+ F+ G GKR RP ++LL++ A
Sbjct: 8 FAPVDQDLRLLTDNLKRLVGARHPILGAAAEHLFEAG--GKRVRPAIVLLVSRA------ 59
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKL 208
L EL R + +AEITEMIH ASL+HDDV+D+AD RR + ++N + N++
Sbjct: 60 --------TLLDQELTARHRRLAEITEMIHTASLVHDDVVDEADLRRNVPTVNSLFDNRV 111
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKT 268
AVLAGDFL +++ LA+L N EVV LL+ V+ GE +Q D ++ Y++K+
Sbjct: 112 AVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEILQSINRFDTDTDLETYLEKS 171
Query: 269 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGS 328
Y+KTASLI+NS KA +L+ +V ++YGK+LGLA+Q++DD+LDFT + LGK +
Sbjct: 172 YFKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTSPTEVLGKPA 231
Query: 329 LSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKH 388
SD+ G ITAP LFAME++P L ++E+ F + +++ ALE + + GI+++RELA
Sbjct: 232 GSDLISGNITAPALFAMEKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAANQ 291
Query: 389 ANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 424
A LA + L +++ R +LL+L V+ R
Sbjct: 292 AQLARQHLSVL------EMSAPRESLLELVDYVLGR 321
>sp|Q0INZ4|SPS3_ORYSJ Probable solanesyl-diphosphate synthase 3, chloroplastic (Fragment)
OS=Oryza sativa subsp. japonica GN=SPS3 PE=3 SV=1
Length = 372
Score = 238 bits (607), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 202/312 (64%), Gaps = 13/312 (4%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
+VAD+L L L+S+V AE P L SAAE F G GKR RP ++ L++ A
Sbjct: 54 LEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAG--GKRLRPALVFLVSRAT----- 106
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKL 208
E A EL T Q +AEI EMIH ASL+HDDV+DD+ RRG +++ + G ++
Sbjct: 107 ------AELAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRV 160
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKT 268
AVLAGDF+ +++ LA+L+N EV+ L++ V++ +GE Q +T D ++D Y+ K+
Sbjct: 161 AVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKS 220
Query: 269 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGS 328
YYKTASLI+ S ++ A+ +G + + ++YG+NLGL++Q++DD+LDFT ++ LGK +
Sbjct: 221 YYKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPA 280
Query: 329 LSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKH 388
SD+ G +TAP++FA+++ PQLR +++ F +++++ A+E + +S GI++ ELA +
Sbjct: 281 GSDLAKGNLTAPVIFALQDEPQLREIIDSEFSETNSLATAIELVHRSGGIKRAHELAREK 340
Query: 389 ANLAAAAIDSLP 400
+A ++ LP
Sbjct: 341 GEIAIQSLQCLP 352
>sp|Q75HZ9|SPS2_ORYSJ Solanesyl-diphosphate synthase 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=SPS2 PE=1 SV=2
Length = 403
Score = 236 bits (601), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 205/313 (65%), Gaps = 13/313 (4%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
+V+D+L L L+S+V AE P L SAAE F G GKR RP ++ L++ A
Sbjct: 87 VVSDDLLKLNNNLKSLVGAENPVLVSAAEQIFGAG--GKRLRPALVFLVSRAT------- 137
Query: 151 LHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAV 210
E A EL T Q +AEI EMIH ASL+HDDV+DD+ RRG +++ + G ++AV
Sbjct: 138 ----AELAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAV 193
Query: 211 LAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYY 270
LAGDF+ +++ LA+L+N EV+ L++ V++ +GE Q +T D ++D Y+ K+YY
Sbjct: 194 LAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDVTLDDYLLKSYY 253
Query: 271 KTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLS 330
KTASL+++S ++ A+ +G + + ++YG+NLGL++Q++DD+LDFT ++ LGK + S
Sbjct: 254 KTASLLASSTRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGS 313
Query: 331 DIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHAN 390
D+ G +TAP++FA+++ P+LR +++ F +S ++ A++ + +S GI++ +ELA + +
Sbjct: 314 DLAKGNLTAPVIFALQDEPKLREIIDSEFSESDSLATAIDLVHRSGGIRRAQELAKEKGD 373
Query: 391 LAAAAIDSLPENN 403
LA + LP++
Sbjct: 374 LALQNLQCLPKSQ 386
>sp|Q76FS5|SPS2_ARATH Solanesyl diphosphate synthase 2, chloroplastic OS=Arabidopsis
thaliana GN=SPS2 PE=1 SV=1
Length = 417
Score = 235 bits (599), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 197/312 (63%), Gaps = 13/312 (4%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F +VAD+L L L S+V AE P L SAAE F G GKR RP ++ L++ A
Sbjct: 99 FEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAG--GKRMRPGLVFLVSRAT----- 151
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKL 208
E A EL + + EI EMIH ASL+HDDVLD++D RRG +++ + G ++
Sbjct: 152 ------AELAGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRV 205
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKT 268
AVLAGDF+ ++A LA+L+N EV+ L++ V++ +GE Q ++ D +D YM K+
Sbjct: 206 AVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKS 265
Query: 269 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGS 328
YYKTASL++ S K A+ + ++VA + +GKNLGL++Q++DD+LDFT ++ LGK +
Sbjct: 266 YYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPA 325
Query: 329 LSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKH 388
+D+ G ITAP++FA+E P+LR ++E F + +++ A+E + GI+K +ELA +
Sbjct: 326 ANDLAKGNITAPVIFALENEPRLREIIESEFCEPGSLEEAIEIVRNRGGIKKAQELAKEK 385
Query: 389 ANLAAAAIDSLP 400
A LA ++ LP
Sbjct: 386 AELALKNLNCLP 397
>sp|Q8S948|SPS1_ARATH Solanesyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1
PE=1 SV=1
Length = 406
Score = 232 bits (591), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 225/389 (57%), Gaps = 30/389 (7%)
Query: 20 GRRWLPS--HPLLSGASHSAAAAAADSSVKVLGCREAYSWSLPALHGIRHQIHHQSSSVI 77
GRR PS + S + + S K + + S + L+GI QS +V
Sbjct: 20 GRRQFPSLAKTVCKFTSSNRSYGGLVGSCKAVPTK---SKEISLLNGI-----GQSQTVS 71
Query: 78 EDTDSQEQLDP------FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRF 131
D QE P F LVA +L L L S+V AE P L SAAE F G GKR
Sbjct: 72 FDL-KQESKQPISLVTLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAG--GKRM 128
Query: 132 RPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDA 191
RP ++ L++ H E A EL T + +AEI EMIH ASL+HDDVLD++
Sbjct: 129 RPGLVFLVS-----------HATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDVLDES 177
Query: 192 DTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQM 251
D RRG +++ + G ++AVLAGDF+ ++A LA+L+N EV+ L++ V++ +GE Q
Sbjct: 178 DMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQA 237
Query: 252 TTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLI 311
++ D +D Y+ K++YKTASL++ S K A+ + +V +++GKNLGL++Q++
Sbjct: 238 SSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIV 297
Query: 312 DDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEY 371
DD+LDFT ++ LGK + SD+ G +TAP++FA+E P+LR ++E F ++ +++ A+E
Sbjct: 298 DDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREPRLREIIESEFCEAGSLEEAIEA 357
Query: 372 LGKSRGIQKTRELAVKHANLAAAAIDSLP 400
+ K GI++ +ELA + A+ A + LP
Sbjct: 358 VTKGGGIKRAQELAREKADDAIKNLQCLP 386
>sp|Q9TLS1|PREA_CYACA Prenyl transferase OS=Cyanidium caldarium GN=preA PE=3 SV=1
Length = 323
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 208/335 (62%), Gaps = 22/335 (6%)
Query: 92 VADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPL 151
V ++L + + L ++ P L++AA++ + VE K+ RP ++LL+A A++
Sbjct: 11 VKEDLLNIEQTLNKLIKVNNPILSAAAKHL--LIVESKKIRPAIVLLVAKAIDKN----- 63
Query: 152 HDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVL 211
+++T QQ +AE+TE+IH A+LLHDDV+D++ RRG S+N GNK+AV
Sbjct: 64 ---------KKIKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKIAVF 114
Query: 212 AGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYK 271
AGDFL +++ LA++ N EVV ++ V+ L GE Q T + S+ Y++K++ K
Sbjct: 115 AGDFLFAQSSWYLANINNLEVVKAISKVITDLAEGELQQNLTQFNTYYSIIKYLEKSFNK 174
Query: 272 TASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 331
TASLI+ SCK+ LL+ + ++YGKNLGLA+Q+IDD+LD T +S +LGK + SD
Sbjct: 175 TASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTSD 234
Query: 332 IRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANL 391
++ G +TAP+LFA+ + +L ++E+ F + S++ A+ + ++ I+++ +LA +H
Sbjct: 235 LKLGNLTAPVLFALTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIEA 294
Query: 392 AAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 426
A +I LP ++++D +L+++ + ++ R K
Sbjct: 295 AINSIKDLPTSSEKD------SLIEIAYDLLNRYK 323
>sp|O43091|DPS1_SCHPO Decaprenyl-diphosphate synthase subunit 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dps1 PE=1 SV=1
Length = 378
Score = 219 bits (558), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 210/351 (59%), Gaps = 23/351 (6%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLM--ATALNVRVP 148
L+ +EL ++ +R M+ + L ++Y+ +GK+ RP+++LLM AT+L +
Sbjct: 36 LIKNELEQISPGIRQMLNSNSEFLEECSKYY--TIAQGKQMRPSLVLLMSKATSLCHGID 93
Query: 149 EPL-------HDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLN 201
+ D + ++ Q +A+ITEMIH+ASLLHDDV+D A+ RRG S N
Sbjct: 94 RSVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPSSN 153
Query: 202 FVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSD----- 256
GN+ ++LAG+F+L+RA A+A L+N +V LLATV+ LV GE +Q+ + D
Sbjct: 154 VAFGNRRSILAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLE 213
Query: 257 -QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVL 315
++ + DYY++K++ KTASLIS SCKA +L + VA A +YG+ +G A+QL+DDVL
Sbjct: 214 IKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVL 273
Query: 316 DFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKS 375
D+T +LGK + +D++ G+ TAP+LFA +++P+L ++ F S++ A + +
Sbjct: 274 DYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVNRFNHPSDIQRARSLVECT 333
Query: 376 RGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 426
I++T A ++ A ++ LP+ + +R+AL L +VITR K
Sbjct: 334 DAIEQTITWAKEYIKKAKDSLLCLPD------SPARKALFALADKVITRKK 378
>sp|P18900|COQ1_YEAST Hexaprenyl pyrophosphate synthase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COQ1 PE=1
SV=1
Length = 473
Score = 218 bits (555), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 227/438 (51%), Gaps = 106/438 (24%)
Query: 87 DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN-- 144
+P SLV+ E++ LAK + +++ + P L Y+F+ EGK+ RP ++LL++ AL+
Sbjct: 44 NPISLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFE--TEGKKVRPLLVLLLSRALSEI 101
Query: 145 ------------VRVPE---------------------PLH--DGVE---------DALA 160
VPE PLH G++ + L
Sbjct: 102 PMTERNHLKIDKSDVPEDPIYSKPSQNQLFQRPASSISPLHILHGIKPLNPLTKGPEPLP 161
Query: 161 TELRTRQQCI-------AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAG 213
E +Q+ I AEI EMIH ASLLHDDV+D +DTRRG S N NK+AVLAG
Sbjct: 162 EETFDKQRGILPKQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNKMAVLAG 221
Query: 214 DFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSS------------------ 255
DFLL RA V+++ L N EVV L++ + +LV GE MQ+ +S
Sbjct: 222 DFLLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVP 281
Query: 256 ------------------------DQ--RCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
DQ + +YY+ KTY KTA+LIS SC+ A+L+G
Sbjct: 282 SKKLEVKEHDFRVPSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGA 341
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFP 349
+ V +D+G+NLG+ +QL+DD+LDFT + LGK S +D++ GI TAP+LFA +E P
Sbjct: 342 SPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDP 401
Query: 350 QLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAI-DSLPENNDEDVT 408
L ++ + F + +V+ ++ + GI KT+ LA ++ + A + DSLPE++
Sbjct: 402 SLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESD----- 456
Query: 409 KSRRALLDLTHRVITRNK 426
+R AL LT+ ++TR K
Sbjct: 457 -ARSALEFLTNSILTRRK 473
>sp|P51268|PREA_PORPU Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1
Length = 323
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 201/336 (59%), Gaps = 22/336 (6%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F + EL + L+S+ P L +AA++ F+ G GKR RP ++LL+A + + +
Sbjct: 8 FHPIEKELYSVEHNLKSVAGTRHPILYAAAKHLFEAG--GKRLRPAIVLLVAKSTSEQ-- 63
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKL 208
E++ Q+ +AEITE+IH ASL+HDDV+D+ TRRG +++ + K+
Sbjct: 64 ------------QEIKPGQRRLAEITEIIHTASLVHDDVIDECSTRRGEKTVHKLFNTKI 111
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKT 268
AVLAGDFL +++ LA++ N EVV ++ V+ GE Q D S+D Y++K+
Sbjct: 112 AVLAGDFLFAQSSWYLANIGNLEVVKVITKVITDFAEGEIRQGLVHFDPSISIDDYIEKS 171
Query: 269 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGS 328
+YKTASL++ SC+ A+L +++ + YGK++GLA+Q++DDVLD G++ SLGK S
Sbjct: 172 FYKTASLVAASCRGAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGKPS 231
Query: 329 LSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKH 388
+D +G +TAPILFA+ + +L ++++ F D ++ +AL + KS GI K ++LA +
Sbjct: 232 GADFMNGNLTAPILFALTQEGKLDQLIQREFSDERDISLALFLIKKSGGITKAKDLAKEQ 291
Query: 389 ANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 424
A + LP+ + +L +LTH +ITR
Sbjct: 292 VQAALCCLQFLPK------SAPVSSLKELTHFIITR 321
>sp|Q1XDL8|PREA_PORYE Prenyl transferase OS=Porphyra yezoensis GN=preA PE=3 SV=1
Length = 323
Score = 214 bits (546), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 203/336 (60%), Gaps = 22/336 (6%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F V EL L K L+++ P L +AA++ F G GKR RP ++ L+A A + +
Sbjct: 8 FYPVEQELCSLEKNLKAVAGTRHPILYAAAKHLFDAG--GKRVRPALVFLVAKATSEK-- 63
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKL 208
++ T Q+ +AEITE+IH ASL+HDD++D+ TRRG+ +++ + K+
Sbjct: 64 ------------QDINTGQKRLAEITEIIHTASLVHDDIIDECTTRRGVKTVHNLFNTKI 111
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKT 268
AVLAGDFL +++ LA+++N VV ++ V+ GE Q D S+D Y++K+
Sbjct: 112 AVLAGDFLFAQSSWYLANIENLAVVKAISKVITDFAEGEIRQGLVHFDPSISIDAYIEKS 171
Query: 269 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGS 328
+YKTASLI+ SC+ A+L G ++ + YGK++GLA+Q++DDVLD TG++ SLGK +
Sbjct: 172 FYKTASLIAASCRGAAMLNGSNHQINNDLYLYGKHMGLAFQIMDDVLDITGSTKSLGKPA 231
Query: 329 LSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKH 388
+D+ +G +T+P+LF++ + L ++++ F +S+++ L + +S GI K ++LA +
Sbjct: 232 GADLINGNLTSPLLFSLTQEASLNDLIDREFCNSTDIASTLFLIKRSGGITKAKDLAKEQ 291
Query: 389 ANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 424
A + + LP+ + +L +LTH +ITR
Sbjct: 292 VQAALSCLQFLPQ------STPVSSLKELTHFIITR 321
>sp|P31171|PREA_CYAPA Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1
Length = 323
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 216/333 (64%), Gaps = 22/333 (6%)
Query: 92 VADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPL 151
V +EL +L K L+ +V + P L++A+E+ F GKR RP ++LL++ A
Sbjct: 11 VENELDLLTKNLKKLVGSGHPILSAASEHLF--SASGKRPRPAIVLLISKA--------- 59
Query: 152 HDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVL 211
+E+ + T +R + +AEITE+IH ASL+HDD+LD++D RRGI +++ G K+A+L
Sbjct: 60 --TMENEIIT---SRHRRLAEITEIIHTASLVHDDILDESDVRRGIPTVHSDFGTKIAIL 114
Query: 212 AGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYK 271
AGDFL +++ LA+L++ EVV L++ V+ GE + +++ Y++K++YK
Sbjct: 115 AGDFLFAQSSWYLANLESLEVVKLISKVITDFAEGEIRRGLNQFKVDLTLEEYLEKSFYK 174
Query: 272 TASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 331
TASL++ S KA ALL+ VA ++YG++LGLA+Q++DD+LDFT ++ LGK S SD
Sbjct: 175 TASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSCSD 234
Query: 332 IRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANL 391
++ G +TAP+LFA+E+ +L ++++ F + + + L+ + +++ I+KTRELA++HA +
Sbjct: 235 LKKGNLTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQV 294
Query: 392 AAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 424
A +++LP ++ S+ AL +T V+ R
Sbjct: 295 AIQCLENLPPSS------SKEALKLITKYVLER 321
>sp|P0AD58|ISPB_SHIFL Octaprenyl-diphosphate synthase OS=Shigella flexneri GN=ispB PE=3
SV=1
Length = 323
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 29/304 (9%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP + +L A A+ ++G IA + E IH A+LLHDDV
Sbjct: 44 GKRIRPMIAVLAARAVG-------YEG----------NAHVTIAALIEFIHTATLLHDDV 86
Query: 188 LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGE 247
+D++D RRG + N GN +VL GDF+ +RA + SL + +V+ +++ V + GE
Sbjct: 87 VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGE 146
Query: 248 TMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLA 307
+Q+ +D + + YM+ Y KTA L + + +LAG T E DYG+ LG A
Sbjct: 147 VLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTA 206
Query: 308 YQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM-----EEFPQLRTVVEQGFEDS 362
+QLIDD+LD+ LGK D+ G T P+L AM E+ +RT +EQG
Sbjct: 207 FQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQG-NGR 265
Query: 363 SNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVI 422
++ LE + ++ TR+ A + A+ A AA+ LP+ T R AL+ L H +
Sbjct: 266 HLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPD------TPWREALIGLAHIAV 319
Query: 423 TRNK 426
R++
Sbjct: 320 QRDR 323
>sp|P0AD57|ISPB_ECOLI Octaprenyl-diphosphate synthase OS=Escherichia coli (strain K12)
GN=ispB PE=1 SV=1
Length = 323
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 29/304 (9%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP + +L A A+ ++G IA + E IH A+LLHDDV
Sbjct: 44 GKRIRPMIAVLAARAVG-------YEG----------NAHVTIAALIEFIHTATLLHDDV 86
Query: 188 LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGE 247
+D++D RRG + N GN +VL GDF+ +RA + SL + +V+ +++ V + GE
Sbjct: 87 VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGE 146
Query: 248 TMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLA 307
+Q+ +D + + YM+ Y KTA L + + +LAG T E DYG+ LG A
Sbjct: 147 VLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTA 206
Query: 308 YQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM-----EEFPQLRTVVEQGFEDS 362
+QLIDD+LD+ LGK D+ G T P+L AM E+ +RT +EQG
Sbjct: 207 FQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQG-NGR 265
Query: 363 SNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVI 422
++ LE + ++ TR+ A + A+ A AA+ LP+ T R AL+ L H +
Sbjct: 266 HLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPD------TPWREALIGLAHIAV 319
Query: 423 TRNK 426
R++
Sbjct: 320 QRDR 323
>sp|P44916|ISPB_HAEIN Octaprenyl-diphosphate synthase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ispB PE=1 SV=1
Length = 329
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 174/346 (50%), Gaps = 32/346 (9%)
Query: 86 LDPFSLVAD-ELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
+D +AD ++ + + + + + ++VP + Y + G GKR RP + +L A +L
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGG--GKRIRPLIAVLAARSLG 66
Query: 145 VRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVM 204
+ A E IH ASLLHDDV+D++D RRG + N
Sbjct: 67 FEGSNSI-----------------TCATFVEFIHTASLLHDDVVDESDMRRGRATANAEF 109
Query: 205 GNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYY 264
GN +VL GDF+ +RA +A L++ ++++++A L GE Q+ +D S Y
Sbjct: 110 GNAASVLVGDFIYTRAFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANY 169
Query: 265 MQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASL 324
M+ Y KTA L + +A A++AG T DYG+ LG A+QL+DDVLD++ + +L
Sbjct: 170 MRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQAL 229
Query: 325 GKGSLSDIRHGIITAPILFAM-----EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQ 379
GK D+ G T P+L AM ++ +R +EQG + + +D L + + + +
Sbjct: 230 GKNVGDDLAEGKPTLPLLHAMRHGNAQQAALIREAIEQGGKREA-IDEVLAIMTEHKSLD 288
Query: 380 KTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRN 425
A + A A AI+ LPE ++ ++AL+ L + + RN
Sbjct: 289 YAMNRAKEEAQKAVDAIEILPE------SEYKQALISLAYLSVDRN 328
>sp|P55785|HEPS2_GEOSE Heptaprenyl diphosphate synthase component 2 OS=Geobacillus
stearothermophilus GN=hepT PE=3 SV=1
Length = 320
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 162/316 (51%), Gaps = 20/316 (6%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
+S ++D+L+ + + L V +E L AA + + G GKR RP +LL A
Sbjct: 7 YSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAG--GKRIRPVFVLLAARF------ 58
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKL 208
G D R + +A E+IH+ASL+HDDV+DDAD RRG ++ N+
Sbjct: 59 -----GQYDL------ERMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRF 107
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKT 268
A+ GD+L +R+ +A L N +LA + + GE Q+ + Y+++
Sbjct: 108 AMYTGDYLFARSLERMAELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRI 167
Query: 269 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGS 328
KTA LI+ SC+ AL AG + + +G +G+++Q+ DD+LDFTGT LGK +
Sbjct: 168 RRKTALLIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPA 227
Query: 329 LSDIRHGIITAPILFAMEEFPQLRTVVEQGFE-DSSNVDIALEYLGKSRGIQKTRELAVK 387
SD+ G +T P+L+A+ + + G E D + + + + ++ I+++ L+ +
Sbjct: 228 GSDLLQGNVTLPVLYALSDERVKAAIAAVGPETDVAEMAAVISAIKRTDAIERSYALSDR 287
Query: 388 HANLAAAAIDSLPENN 403
+ + A +D LP N
Sbjct: 288 YLDKALHLLDGLPMNE 303
>sp|P31114|HEPS2_BACSU Heptaprenyl diphosphate synthase component 2 OS=Bacillus subtilis
(strain 168) GN=hepT PE=1 SV=1
Length = 348
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 164/314 (52%), Gaps = 22/314 (7%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
+S + D++ ++ + L V ++ P L+ A + + G GKR RP +LL + +
Sbjct: 35 YSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAG--GKRIRPVFVLLSGMFGDYDI- 91
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKL 208
+ + +A EMIH+ASL+HDDV+DDA+ RRG ++ N++
Sbjct: 92 ----------------NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRI 135
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKT 268
A+ GD++L+ + + + + +L+ + + GE Q+ + ++ Y+++
Sbjct: 136 AMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRI 195
Query: 269 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGS 328
KTA LI+ SC+ A+ +G ++ + +G +G++YQ+IDD+LDFT T LGK
Sbjct: 196 KRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPV 255
Query: 329 LSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSS--NVDIALEYLGKSRGIQKTRELAV 386
D+ G +T P+L+A++ P L+ ++ +++ ++ +E + K+ I+ + ++
Sbjct: 256 GGDLLQGNVTLPVLYALKN-PALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSE 314
Query: 387 KHANLAAAAIDSLP 400
+ A +++LP
Sbjct: 315 MYLQKAFQKLNTLP 328
>sp|O66129|HEXB_MICLU Hexaprenyl-diphosphate synthase large subunit
((2E,6E)-farnesyl-diphosphate specific) OS=Micrococcus
luteus GN=hexs-b PE=1 SV=1
Length = 325
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 160/316 (50%), Gaps = 29/316 (9%)
Query: 99 LAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDA 158
+ KRL + ++ + AA + G GKR RP +LL L+D +D
Sbjct: 17 VEKRLYECIQSDSETINKAAHHILSSG--GKRVRPMFVLLSGF---------LNDTQKDD 65
Query: 159 LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLS 218
L +RT A E++H+ASL+HDD +D++D RRG S++ A+ G FLL+
Sbjct: 66 L---IRT-----AVSLELVHMASLVHDDYIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLA 117
Query: 219 RACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISN 278
RA +A++ N++ + + + + GE QM + S Y+++ KTA LI
Sbjct: 118 RALQNIATINNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEA 177
Query: 279 SCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIIT 338
SC AL + + +G +G++YQ+IDD+LD+T A+LGK SDIR+G IT
Sbjct: 178 SCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHIT 237
Query: 339 APILFAM-----EEFPQLRTVVEQGFEDSSNVDIALEYL---GKSRGIQKTRELAVKHAN 390
P++ A+ ++ +L VV+ S++ D +Y+ K GI+ L+ K+ +
Sbjct: 238 YPLMAAIANLKEQDDDKLEAVVKH--LTSTSDDEVYQYIVSQVKQYGIEPAELLSRKYGD 295
Query: 391 LAAAAIDSLPENNDED 406
A + L ++N +D
Sbjct: 296 KAKYHLSQLQDSNIKD 311
>sp|Q86YH6|DLP1_HUMAN Decaprenyl-diphosphate synthase subunit 2 OS=Homo sapiens GN=PDSS2
PE=1 SV=2
Length = 399
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 167/322 (51%), Gaps = 25/322 (7%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L + A + R V+LL++ A P
Sbjct: 72 LLSDELSNIAMQVRKLVGTQHP-LLTTARGLVHDSWNSLQLRGLVVLLISKAAG---PSS 127
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKL 208
++ ++ + + + + Q+ +AEITE+IH+A L+H +++ + + G L + GNK+
Sbjct: 128 VNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKI 187
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDY----Y 264
A+L+GDFLL+ AC LA L+NT+VV LLA+ + LV G + +TS + + D +
Sbjct: 188 AILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTW 247
Query: 265 MQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASL 324
++T+ +L++ SC+A LA AEV +AF YGK++ +++++ DV F S
Sbjct: 248 KEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEKTS- 306
Query: 325 GKGSLSDIRHGIITAPILFAME------EFPQLRTVVEQGFEDSSNVDIALEYLGKSRGI 378
+ + +AP++ E Q+ E+G D + + E + +G+
Sbjct: 307 -----DSMTFNLNSAPVVLHQEFLGRDLWIKQIGEAQEKGRLDYAKLR---ERIKAGKGV 358
Query: 379 QKTRELAVKHANLAAAAIDSLP 400
+L H N A A++S P
Sbjct: 359 TSAIDLCRYHGNKALEALESFP 380
>sp|O24743|SDSA_RHOCA All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate
specific) OS=Rhodobacter capsulatus GN=sdsA PE=1 SV=1
Length = 325
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 32/343 (9%)
Query: 87 DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVR 146
D + VA + + + + + + ++V + S +++ + G GKR RP + LL A A
Sbjct: 8 DILAPVAQDFAAMDQFINEGISSKVALVMSVSKHVVEAG--GKRMRPIMCLLAAYACG-- 63
Query: 147 VPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGN 206
T L+ Q+ +A I EM+H A+L+HDDV+D++ RRG + N N
Sbjct: 64 -------------ETNLKHAQK-LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNN 109
Query: 207 KLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQ 266
+ AVL GDFL++RA L L N ++ +T + GE +Q+ + D Y+Q
Sbjct: 110 QTAVLVGDFLIARAFDLLVDLDNMILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEDIYLQ 169
Query: 267 KTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGK 326
+ KT+ L + + A+LAG+ L + + G A+Q+IDD+LD+T + +LGK
Sbjct: 170 IIHGKTSRLFELATEGAAILAGKPEYREPLR-RFAGHFGNAFQIIDDILDYTSDADTLGK 228
Query: 327 GSLSDIRHGIITAPILFAM-----EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKT 381
D+ G T P++ AM E+ +R + G +S ++ + + S +
Sbjct: 229 NIGDDLMEGKPTLPLIAAMQNTQGEQRDLIRRSIATG--GTSQLEQVIAIVQNSGALDYC 286
Query: 382 RELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 424
+ A + A A++ LPE + R+AL++LT + R
Sbjct: 287 HKRATEETERALQALEILPE------STYRQALVNLTRLALDR 323
>sp|Q5U2R1|DLP1_RAT Decaprenyl-diphosphate synthase subunit 2 OS=Rattus norvegicus
GN=Pdss2 PE=2 SV=1
Length = 401
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 166/322 (51%), Gaps = 24/322 (7%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L + A F + R V+LL++ A P
Sbjct: 73 LLSDELSNVAMQVRKLVGTQHP-LLTTARGFVHDSRHNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKL 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKI 188
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSS-------DQRCSM 261
AVL+GDFLL+ AC LA L+NT+VV LLA+ + LV G + + S+ D R S
Sbjct: 189 AVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRIST 248
Query: 262 DYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTS 321
+ ++T+ +L++ SCKA LA A V +AF YGK++ +++++ D+ F
Sbjct: 249 --WKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFIKDK 306
Query: 322 ASLGKGSLSDIRHGIITAPILFAMEEFPQ---LRTVVEQGFEDSSNVDIALEYLGKSRGI 378
AS K + +AP++ E + ++ + E + N E + +G+
Sbjct: 307 ASDSK------TFNLNSAPVVLHQEFLGRDLWIKQIGEAQEKGRLNYTKLRETIKAGKGV 360
Query: 379 QKTRELAVKHANLAAAAIDSLP 400
+L H N A A++S P
Sbjct: 361 TSAIDLCRYHGNKALEALESFP 382
>sp|Q33DR3|DLP1_MOUSE Decaprenyl-diphosphate synthase subunit 2 OS=Mus musculus GN=Pdss2
PE=1 SV=2
Length = 401
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 164/320 (51%), Gaps = 20/320 (6%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V P L + A + R V+LL++ A P
Sbjct: 73 LLSDELSNIAMQVRKLVGTGHP-LLTTARALVHDSRHNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKL 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKI 188
Query: 209 AVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMD-----Y 263
A+L+GDFLL+ AC LA L+NT+VV LL++ + LV G + + S+ + D
Sbjct: 189 AILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGIST 248
Query: 264 YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSAS 323
+ ++T+ +L++ SC+A LA A V +AF YGK++ +++++ D+ F AS
Sbjct: 249 WKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFIKDKAS 308
Query: 324 LGKGSLSDIRHGIITAPILFAMEEFPQ---LRTVVEQGFEDSSNVDIALEYLGKSRGIQK 380
K + +AP++ E + ++ + E + S N E + +G+
Sbjct: 309 DSK------TFNLNSAPVVLHQEFLGRDLWIKQIGEAQEKGSLNYSKLRETIKAGKGVTS 362
Query: 381 TRELAVKHANLAAAAIDSLP 400
+L H N A A++S P
Sbjct: 363 AIDLCRYHGNKALEALESFP 382
>sp|Q53479|IDSA_METTM Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=idsA PE=1 SV=3
Length = 325
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 170/348 (48%), Gaps = 39/348 (11%)
Query: 86 LDPFSLVADELSILAKRLRSMVVAEVPK-LASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
L +S VAD KR+ + P L A+E+ G GK+ RP++ LL A+
Sbjct: 8 LRKYSEVAD------KRIMECISDITPDTLLKASEHLITAG--GKKIRPSLALLSCEAVG 59
Query: 145 VRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVM 204
P EDA +A E+IH SL+HDD++DD + RRG S++ +
Sbjct: 60 ---GNP-----EDAAG---------VAAAIELIHTFSLIHDDIMDDDEMRRGEPSVHVIW 102
Query: 205 GNKLAVLAGDFLLSRACVALASLKNTE-VVTLLATVVEHLVT---GETMQMTTSSDQRCS 260
G +A+LAGD L S+A A+ ++E V LA VV+ V G+ + M +
Sbjct: 103 GEPMAILAGDVLFSKAFEAVIRNGDSERVKDALAVVVDSCVKICEGQALDMGFEERLDVT 162
Query: 261 MDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGT 320
D YM+ Y KTA+LI+ + KA A++ G + DYGK +GLA+Q+ DD LD
Sbjct: 163 EDEYMEMIYKKTAALIAAATKAGAIMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSD 222
Query: 321 SASLGKGSLSDIRHGIITAPILFAMEEFPQ---LRTVVEQGFEDSSNVDIALEYLGKSRG 377
SLGK SDI G +T ++ A+EE + R + G D +V A+E +
Sbjct: 223 EESLGKPVGSDIAEGKMTLMVVKALEEASEEDRERLISILGSGDEGSVAEAIEIFERYGA 282
Query: 378 IQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRN 425
Q E+A+ + +A ++ L +++ +R AL+ + V+ R
Sbjct: 283 TQYAHEVALDYVRMAKERLEILEDSD------ARDALMRIADFVLERE 324
>sp|O26156|IDSA_METTH Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=idsA PE=3 SV=1
Length = 325
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 175/349 (50%), Gaps = 41/349 (11%)
Query: 86 LDPFSLVADELSILAKRLRSMVVAEVPK-LASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
L +S +ADE R+R + P+ L A+E+ G GK+ RP++ LL + A+
Sbjct: 8 LRKYSEMADE------RIRESISDITPETLLRASEHLITAG--GKKIRPSLALLSSEAVG 59
Query: 145 VRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVM 204
+P DA +A E+IH SL+HDD++DD + RRG +++ +
Sbjct: 60 ---GDP-----GDAAG---------VAAAIELIHTFSLIHDDIMDDDEIRRGEPAVHVLW 102
Query: 205 GNKLAVLAGDFLLSRACVALASLKNTEVVT-LLATVVEHLVT---GETMQMTTSSDQRCS 260
G +A+LAGD L S+A A+ ++E+V LA VV+ V G+ + M +
Sbjct: 103 GEPMAILAGDVLFSKAFEAVIRNGDSEMVKEALAVVVDSCVKICEGQALDMGFEERLDVT 162
Query: 261 MDYYMQKTYYKTASLISNSCKAIALLAGQTA-EVAILAFDYGKNLGLAYQLIDDVLDFTG 319
+ YM+ Y KTA+LI+ + KA A++ G + E+A L DYG+ +GLA+Q+ DD LD
Sbjct: 163 EEEYMEMIYKKTAALIAAATKAGAIMGGGSPQEIAALE-DYGRCIGLAFQIHDDYLDVVS 221
Query: 320 TSASLGKGSLSDIRHGIITAPILFAME---EFPQLRTVVEQGFEDSSNVDIALEYLGKSR 376
SLGK SDI G +T ++ A+E E + R + G D V A+E +
Sbjct: 222 DEESLGKPVGSDIAEGKMTLMVVKALERASEKDRERLISILGSGDEKLVAEAIEIFERYG 281
Query: 377 GIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRN 425
+ +A+ H +A ++ L E++ +R AL + V+ R
Sbjct: 282 ATEYAHAVALDHVRMAKERLEVLEESD------AREALAMIADFVLERE 324
>sp|P95999|GGPS_SULSO Geranylgeranyl diphosphate synthase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=gds
PE=3 SV=2
Length = 332
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 169/353 (47%), Gaps = 37/353 (10%)
Query: 87 DPFSLVADEL-SILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNV 145
D SL +E+ + + R+++ V + L A+ + F G GKR RP VL+
Sbjct: 4 DDLSLYFNEIVNNVNFRIKNFVKSNFKTLEEASFHLFTAG--GKRLRPLVLV-------- 53
Query: 146 RVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMG 205
D + + R R A E++H +L+HDD++D+ RRG+ +++ G
Sbjct: 54 --------SSSDLIGGD-RERAYKAAAAVEILHNFTLVHDDIMDNDGLRRGLPTVHVKWG 104
Query: 206 NKLAVLAGDFLLSRACVAL-ASLK----NT--EVVTLLATVVEHLVTGETMQMTTSSDQR 258
+A+LAGD+L ++A AL +LK NT + ++ T +E + G+ M M+ +
Sbjct: 105 EPMAILAGDYLHAKAFEALNEALKGLDGNTFYKAFSIFITSIEIISEGQAMDMSFENRLD 164
Query: 259 CSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFT 318
+ + Y+Q KTA L S S ++ +V +YG NLG+++Q++DD+L
Sbjct: 165 VTEEEYIQMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGII 224
Query: 319 GTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRT---VVEQGFEDSSNVDI--ALEYLG 373
G LGK SDIR G T ++ + E + V G +++ D+ A E +
Sbjct: 225 GDEKELGKPIYSDIREGKKTILVIKTLSEATEDEKKILVSTLGNKEAKKEDLERASEIIR 284
Query: 374 KSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 426
K +Q +LA K+++LA + +P +N + +AL L I R K
Sbjct: 285 K-HSLQYAYDLAKKYSDLAIENLREIPVSN----KTAEKALKYLAQFTIQRRK 332
>sp|P39464|GGPS_SULAC Geranylgeranyl diphosphate synthase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=gds PE=1 SV=1
Length = 330
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 26/251 (10%)
Query: 103 LRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATE 162
++S + +VPKL A+ + F G GKR RP +L + + +
Sbjct: 19 IKSYISGDVPKLYEASYHLFTSG--GKRLRPLILTISSDLFGGQ---------------- 60
Query: 163 LRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA-- 220
R R E++H +L+HDD++D + RRG+ +++ G LA+LAGD L ++A
Sbjct: 61 -RERAYYAGAAIEVLHTFTLVHDDIMDQDNIRRGLPTVHVKYGLPLAILAGDLLHAKAFQ 119
Query: 221 --CVALASLKNTEVVTLLATVVEHLVT---GETMQMTTSSDQRCSMDYYMQKTYYKTASL 275
AL L + ++ ++ G+ + M Y+ KTA+L
Sbjct: 120 LLTQALRGLPSETIIKAFDIFTRSIIIISEGQAVDMEFEDRIDIKEQEYLDMISRKTAAL 179
Query: 276 ISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHG 335
S S AL+AG L D+G NLG+A+Q++DD+L T LGK SDIR G
Sbjct: 180 FSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREG 239
Query: 336 IITAPILFAME 346
T ++ +E
Sbjct: 240 KKTILVIKTLE 250
>sp|Q58270|IDSA_METJA Short chain isoprenyl diphosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=idsA PE=3 SV=1
Length = 327
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 120/240 (50%), Gaps = 28/240 (11%)
Query: 113 KLASAAEYFFKMGVEGKRFRP--TVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCI 170
KL +A+++ G GKR RP TV+ M D +E+ L
Sbjct: 34 KLYNASKHLLFAG--GKRIRPYLTVVTYMLKK----------DDIEEVLPA--------- 72
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT 230
A E+IH +L+HDD++D+ D RRG +++ V G +A+LAGD L ++A A++ +K+
Sbjct: 73 AAAVELIHNYTLIHDDIMDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVSRIKDN 132
Query: 231 ----EVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALL 286
EV+ +L+ + G+ M M + +M+ Y+ KT +L+ S A++
Sbjct: 133 KKAHEVLKILSKACVEVCEGQAMDMEFEN-YYPTMEEYLDMIRKKTGALLEASVGIGAVM 191
Query: 287 AGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAME 346
A E +Y K +GL +Q+ DDVLD G LGK SDIR G T ++ A++
Sbjct: 192 ADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALK 251
>sp|Q3IPL1|GFPS_NATPD Geranylfarnesyl diphosphate synthase OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=idsA3 PE=1 SV=1
Length = 341
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 166/346 (47%), Gaps = 24/346 (6%)
Query: 90 SLVADELSILAKRLRSMVVAEVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATAL-NVRV 147
S +A+ I+ + + + + P +L SA+ Y G GKR RPT+LLL A +L +V
Sbjct: 9 SAIAERREIVNEAVSEQLPVQKPERLYSASRYLLDAG--GKRLRPTILLLAAESLADV-- 64
Query: 148 PEPL---HDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVM 204
EPL + E+ ++ E+I +L+HDD++DD D RRG+ +++
Sbjct: 65 -EPLSADYRQFPSLPGDEVDVLSAAVS--IEVIQSFTLIHDDIMDDDDLRRGVPAVHREY 121
Query: 205 GNKLAVLAGDFLLSRAC-----VALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRC 259
+ A+LAGD L S+A + ++ E + LAT + G+ + + +
Sbjct: 122 DLETAILAGDTLYSKAFEYMLDTGAPAERSVEALDELATTCTEICEGQALDVDFENRSDV 181
Query: 260 SMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTG 319
+ + Y++ +KTA L + + A+L G E YG ++G A+Q+ DD+LD T
Sbjct: 182 TTEEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTA 241
Query: 320 TSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQ 379
S LGK SD+ T L A ++ + +V D + ++ A++ L + I
Sbjct: 242 PSDELGKQRGSDLVENKRTVITLHARDQGIDVEGLVSDDPSD-AEIEAAVQTLEDAGSID 300
Query: 380 KTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRN 425
RE+A+ +D LPEN ++R+ L D+ ++ R+
Sbjct: 301 FAREMALDLVTSGKERLDVLPEN------EARQLLEDIADFLVERS 340
>sp|P48368|CRTE_CYAPA Geranylgeranyl pyrophosphate synthase homolog OS=Cyanophora
paradoxa GN=crtE PE=3 SV=1
Length = 300
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 29/252 (11%)
Query: 122 FKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVAS 181
+ + GKR RP +L +A+ E +E AL T A EMIH S
Sbjct: 43 YSLSAGGKRIRP--ILCLASC------ELAGGTMEMALPT---------ACALEMIHTMS 85
Query: 182 LLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS-LKNTE---VVTL 235
L+HDD+ +D+ RRG + + + G LA+LAGD LL+ A +A+ KN +V +
Sbjct: 86 LIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVPADLIVKV 145
Query: 236 LATVVEH-----LVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQT 290
+A V LV G+ + +++ +++ +KT +L+ + + ALLAG
Sbjct: 146 IAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLSGALLAGAK 205
Query: 291 AEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE-FP 349
+ Y +N+GLA+Q+IDDVLD T LGK D++ T P + +EE
Sbjct: 206 EKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFWGVEESIK 265
Query: 350 QLRTVVEQGFED 361
Q +VE+ E+
Sbjct: 266 QAELLVEEAKEE 277
>sp|Q94ID7|GGPPS_HEVBR Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea
brasiliensis GN=GGPS PE=1 SV=1
Length = 370
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 28/231 (12%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP + L + G D++A A EMIH SL+HDD+
Sbjct: 118 GKRVRPALCLAACELV----------GGNDSMAMP-------AACAVEMIHTMSLIHDDL 160
Query: 188 --LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA-------CVALASLKNTEVVTLLAT 238
+D+ D RRG + + V G +AVLAGD LL+ A + ++S + V LA
Sbjct: 161 PCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAK 220
Query: 239 VV--EHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAIL 296
+ E LV G+ + + + ++ +KTA L+ + A+L G T E
Sbjct: 221 AIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEK 280
Query: 297 AFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 347
Y +++GL +Q++DD+LD T +S LGK + D+ +T P L +E+
Sbjct: 281 LRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEK 331
>sp|P0A5H8|EFPP_MYCTU (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium tuberculosis
GN=Rv3398c PE=1 SV=1
Length = 359
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GK RP ++ + A A +P H + A++ EL +H SL+HDD+
Sbjct: 72 GKAIRPALVFVAAEAAGA---DP-HSAIPGAVSVEL-------------VHNFSLVHDDL 114
Query: 188 LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVE---HLV 244
+D + RR ++ + G+ +A+LAGD +LS A L + V L + E L+
Sbjct: 115 MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELI 174
Query: 245 TGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNL 304
G+ S ++D ++ KTA+L++ S + ALLAG V YG+++
Sbjct: 175 RGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHI 234
Query: 305 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILF 343
GLA+QL+DD+L G GK SD+R T P+ +
Sbjct: 235 GLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTW 273
>sp|P0A5H9|EFPP_MYCBO (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb3431c PE=3 SV=1
Length = 359
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GK RP ++ + A A +P H + A++ EL +H SL+HDD+
Sbjct: 72 GKAIRPALVFVAAEAAGA---DP-HSAIPGAVSVEL-------------VHNFSLVHDDL 114
Query: 188 LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVE---HLV 244
+D + RR ++ + G+ +A+LAGD +LS A L + V L + E L+
Sbjct: 115 MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELI 174
Query: 245 TGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNL 304
G+ S ++D ++ KTA+L++ S + ALLAG V YG+++
Sbjct: 175 RGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHI 234
Query: 305 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILF 343
GLA+QL+DD+L G GK SD+R T P+ +
Sbjct: 235 GLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTW 273
>sp|Q43133|GGPPS_SINAL Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic
OS=Sinapis alba GN=GGPS1 PE=1 SV=1
Length = 366
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 126/262 (48%), Gaps = 34/262 (12%)
Query: 101 KRLRSMVVAEVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDAL 159
K L S V P K+ A Y G GKR RP VL + A L G E++L
Sbjct: 85 KALDSAVPLREPLKIHEAMRYSLLAG--GKRVRP-VLCIAACELV---------GGEESL 132
Query: 160 ATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLL 217
A R EMIH SL+HDD+ +D+ D RRG + + V G +AVLAGD LL
Sbjct: 133 AMPARC-------AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALL 185
Query: 218 SRACVALASLKNTEV--------VTLLATVV--EHLVTGETMQMTTSSD--QRCSMDYYM 265
S A LAS ++EV V LA + E LV G+ + +++ +++
Sbjct: 186 SFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLK 245
Query: 266 QKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLG 325
+KTA+L+ S ++ G + E + + +GL +Q++DD+LD T +S LG
Sbjct: 246 FIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELG 305
Query: 326 KGSLSDIRHGIITAPILFAMEE 347
K + D+ +T P L +E+
Sbjct: 306 KTAGKDLIADKLTYPKLMGLEK 327
>sp|Q8PYS1|GFPS_METMA Geranylfarnesyl diphosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_0789 PE=1 SV=1
Length = 295
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 104 RSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATEL 163
S+ + E P L E+ G GKR RP +LLL++ + +
Sbjct: 28 ESITLIEDPGLKKMVEHVCHSG--GKRIRPIILLLVSE-----------------ICSGS 68
Query: 164 RTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVA 223
+R A EM+H ASL+HDD+LD RR + S G A+L GD+L++++ +A
Sbjct: 69 YSRSLNAALAVEMMHSASLIHDDLLDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKS-IA 127
Query: 224 LASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAI 283
S +V+ + GE + + + DY+ + Y KTASL + S
Sbjct: 128 FISPYGEKVIQDFGKAGMDMAEGEVLDLKLEDESFGENDYF-KCIYKKTASLFAISASIG 186
Query: 284 ALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDF 317
A G E+A +G LG AYQ++DD+L+F
Sbjct: 187 AYTGGAEEELAERFSHFGNALGTAYQIVDDILEF 220
>sp|Q8PW34|GGPP_METMA Geranylgeranyl diphosphate synthase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=MM_1767 PE=3 SV=1
Length = 324
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 143/301 (47%), Gaps = 32/301 (10%)
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATAL--NVRVPEPLHDGVEDALATELRTRQQCI 170
+L A+ Y G GKR RP VL+L A A+ N+R P A+A EL
Sbjct: 32 ELYKASRYLVDAG--GKRLRPAVLILAAEAVGSNLRSVLPA------AVAVEL------- 76
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT 230
+H +L+HDD++D D RRG+ +++ G A+LAGD L S+A L+ ++N
Sbjct: 77 ------VHNFTLIHDDIMDRDDIRRGMPAVHVKWGEAGAILAGDTLYSKAFEILSKVENE 130
Query: 231 EVVTL-----LATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIAL 285
V L L+ + G+ + M + ++ + Y++ KT+ L + + K AL
Sbjct: 131 PVRVLKCMDVLSKTCTEICEGQWLDMDFETRKKVTESEYLEMVEKKTSVLYAAAAKIGAL 190
Query: 286 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM 345
L G + EVA +YG+ +G+ +Q+ DDVLD T LGK SD+ G T ++ A
Sbjct: 191 LGGASDEVAEALSEYGRLIGIGFQMYDDVLDMTAPEEVLGKVRGSDLMEGKYTLIVINAF 250
Query: 346 EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSL---PEN 402
E+ +L + +G + A+ L + + + LA+ + +D L PE
Sbjct: 251 EKGVKL-DIFGKGEATLEETEAAVRTLTECGSLDYVKNLAISYIEEGKEKLDVLRDCPEK 309
Query: 403 N 403
Sbjct: 310 T 310
>sp|P34802|GGPP1_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase large subunit
1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1
SV=2
Length = 371
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 35/278 (12%)
Query: 86 LDPFSLVADELSILAKRLRSMVVAEVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
D S + + ++ K L S V P K+ A Y G GKR RP VL + A L
Sbjct: 74 FDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAG--GKRVRP-VLCIAACELV 130
Query: 145 VRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNF 202
G E++ A A EMIH SL+HDD+ +D+ D RRG + +
Sbjct: 131 ---------GGEESTAMP-------AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 174
Query: 203 VMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATV-----------VEHLVTGETMQM 251
V G +AVLAGD LLS A LAS +++VV+ + V E LV G+ + +
Sbjct: 175 VFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDI 234
Query: 252 TTSSD--QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQ 309
++ +++ +KTA+L+ S A++ G + + + + +GL +Q
Sbjct: 235 SSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQ 294
Query: 310 LIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 347
++DD+LD T +S LGK + D+ +T P + +E+
Sbjct: 295 VVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEK 332
>sp|Q9UWR6|GFPS_AERPX Geranylfarnesyl diphosphate synthase OS=Aeropyrum pernix GN=fgs
PE=1 SV=1
Length = 318
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 25/243 (10%)
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAE 172
+L+ A+ + K G GKR RP + LL A L E R +A
Sbjct: 17 RLSGASLHLIKAG--GKRLRPLITLLTARMLG---------------GLEAEARAIPLAA 59
Query: 173 ITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT-- 230
E H SL+HDD++D + RRG+ + + V G+ A+LAGD L + A +A +
Sbjct: 60 SIETAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGM 119
Query: 231 ------EVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIA 284
+L+ + G+ M + Y+ KT +LI + + A
Sbjct: 120 SHEQAYRAFKVLSEAAIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGA 179
Query: 285 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 344
+ AG +E+ + + G N G+A+Q+ DD+L G GK +D+R G T +++A
Sbjct: 180 VAAGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYA 239
Query: 345 MEE 347
+++
Sbjct: 240 VKK 242
>sp|P80042|GGPPS_CAPAN Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum
annuum GN=GGPS1 PE=3 SV=1
Length = 369
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 137/285 (48%), Gaps = 35/285 (12%)
Query: 77 IEDTDSQEQLDPFSLVADELSILAKRL--RSMVVAEVPKLASAAEYFFKMGVEGKRFRPT 134
IE ++E + F + E +I + +++V E + A Y G GKR RP
Sbjct: 67 IEAAQTEEPFN-FKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAG--GKRVRP- 122
Query: 135 VLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDAD 192
+L L A L + E+A+A A EMIH SL+HDD+ +D+ D
Sbjct: 123 MLCLAACEL-------VGGNQENAMAA---------ACAVEMIHTMSLIHDDLPCMDNDD 166
Query: 193 TRRGIGSLNFVMGNKLAVLAGDFLLSRA----CVALASLKNTEVVTLLATV-----VEHL 243
RRG + + + G +AVLAGD LL+ A + A + + +V +A + E L
Sbjct: 167 LRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGL 226
Query: 244 VTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQT-AEVAILAFDYGK 302
V G+ + + + S++ +KTA+L+ +S A+L G T EV L + +
Sbjct: 227 VAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLR-RFAR 285
Query: 303 NLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 347
+GL +Q++DD+LD T +S LGK + D+ T P L +E+
Sbjct: 286 CIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEK 330
>sp|P17060|CRTE_RHOCB Geranylgeranyl pyrophosphate synthase OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=crtE PE=3
SV=1
Length = 289
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 114/248 (45%), Gaps = 40/248 (16%)
Query: 97 SILAKRLRSMVVAEVPKLASAA-EYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGV 155
S L K L + E P L +AA Y G G R RPT+L+ +A A P V
Sbjct: 9 SALVKALSPEALGESPPLLAAALPYGVFPG--GARIRPTILVSVALACGDDCP-----AV 61
Query: 156 EDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAG 213
DA A L E++H ASL+HDD+ D+AD RRG SL+ LAVLAG
Sbjct: 62 TDAAAVAL-----------ELMHCASLVHDDLPAFDNADIRRGKPSLHKAYNEPLAVLAG 110
Query: 214 DFLLSRACVALA---------SLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYY 264
D LL R LA +LK + L+ + G+ + S+ + + Y
Sbjct: 111 DSLLIRGFEVLADVGAVNPDRALKLISKLGQLSGARGGICAGQAWE----SESKVDLAAY 166
Query: 265 MQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASL 324
Q KT +L + + A+ AG AE FD G +G A+Q+ DD+ D ++ ++
Sbjct: 167 HQA---KTGALFIAATQMGAIAAGYEAEP---WFDLGMRIGSAFQIADDLKDALMSAEAM 220
Query: 325 GKGSLSDI 332
GK + DI
Sbjct: 221 GKPAGQDI 228
>sp|Q08291|ISPA_GEOSE Farnesyl diphosphate synthase OS=Geobacillus stearothermophilus
PE=1 SV=1
Length = 297
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAE 172
KL A Y + G GKR RP +LL AL G + A+ +A
Sbjct: 33 KLKKAMAYSLEAG--GKRIRPLLLLSTVRAL----------GKDPAVGLP-------VAC 73
Query: 173 ITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT 230
EMIH SL+HDD+ +D+ D RRG + + V G +A+LAGD LL+ A + + +
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDE 133
Query: 231 EV--------VTLLATVV--EHLVTGETMQMTTSSDQ-RCSMDYYMQKTYYKTASLISNS 279
+ + LA E +V G+ M S Y+ + +KT ++ S
Sbjct: 134 RIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHR--HKTGKMLQYS 191
Query: 280 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITA 339
A AL+ G A ++ +LGLA+Q+ DD+LD G +GK SD + T
Sbjct: 192 VHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATY 251
Query: 340 PILFAM 345
P L ++
Sbjct: 252 PALLSL 257
>sp|Q42698|GGPPS_CATRO Geranylgeranyl pyrophosphate synthase, chloroplastic
OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1
Length = 357
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
Query: 174 TEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLS-------RACVAL 224
EMIH SL+HDD+ +D+ D RRG + + V G +AVLAGD LL+ A +
Sbjct: 134 VEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGV 193
Query: 225 ASLKNTEVVTLLATVV--EHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKA 282
+S + VV LA + E LV G+ + + + +++ +KTA+L+ S
Sbjct: 194 SSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVL 253
Query: 283 IALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPIL 342
A++ G E + + +GL +Q++DD+LD T +S LGK + D+ +T P L
Sbjct: 254 GAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKL 313
Query: 343 FAMEE 347
+++
Sbjct: 314 LGIDK 318
>sp|Q9ZU77|GGPP7_ARATH Geranylgeranyl pyrophosphate synthase 7, chloroplastic
OS=Arabidopsis thaliana GN=At2g18620 PE=2 SV=1
Length = 347
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 29/232 (12%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP VL + A L G E+++A A EMIH SL+HDD+
Sbjct: 94 GKRVRP-VLCIAACELV---------GGEESVALP-------AACAVEMIHTMSLIHDDL 136
Query: 188 --LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA------CVALASLKNTEVVTLLATV 239
+D+ D RRG + + V G +AVLAGD L+S A A++ + + LA
Sbjct: 137 PCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATSTAVSPARVVRAIGELAKA 196
Query: 240 V--EHLVTGETMQMTTSS-DQR-CSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAI 295
+ + LV G+ + +T+ DQ ++ +KTA L+ + A++ G + E
Sbjct: 197 IGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVE 256
Query: 296 LAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 347
+ + +GL +Q++DD+LD T +S LGK + D+ +T P L +E+
Sbjct: 257 KLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEK 308
>sp|P21684|CRTE_PANAN Geranylgeranyl pyrophosphate synthase OS=Pantoea ananas GN=crtE
PE=3 SV=1
Length = 302
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 26/199 (13%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP +LLL A L V HDG+ D +A EM+H ASL+ DD+
Sbjct: 52 GKRIRPMLLLLTARDLGCAVS---HDGLLD------------LACAVEMVHAASLILDDM 96
Query: 188 --LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS------LKNTEVVTLLATV 239
+DDA RRG +++ G +A+LA LLS+A +A L V+ L+
Sbjct: 97 PCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAFGVIADADGLTPLAKNRAVSELSNA 156
Query: 240 V--EHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILA 297
+ + LV G+ ++ R S + + ++KT++L S + +++A ++E
Sbjct: 157 IGMQGLVQGQFKDLSEGDKPR-SAEAILMTNHFKTSTLFCASMQMASIVANASSEARDCL 215
Query: 298 FDYGKNLGLAYQLIDDVLD 316
+ +LG A+QL+DD+ D
Sbjct: 216 HRFSLDLGQAFQLLDDLTD 234
>sp|Q9LJY2|GGPPA_ARATH Geranylgeranyl pyrophosphate synthase 10, mitochondrial
OS=Arabidopsis thaliana GN=At3g20160 PE=2 SV=1
Length = 344
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 23/191 (12%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT-- 230
EM+H +SL+ DD+ +D+ RRG + + V G +A+LA S+A +ALA K T
Sbjct: 120 EMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILA-----SQALIALAVQKTTSS 174
Query: 231 -----------EVVTLLATVVEHLVTGETMQMTTSS---DQRCSMDYYMQKTYYKTASLI 276
+ V + VE LV G+ + D +++ +KTA+L+
Sbjct: 175 TFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALL 234
Query: 277 SNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGI 336
+ A++ G + E Y + +GL +Q++DDVLD T +S LGK + D+ G
Sbjct: 235 EAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGK 294
Query: 337 ITAPILFAMEE 347
+T P L +E+
Sbjct: 295 LTYPRLMGVEK 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,504,924
Number of Sequences: 539616
Number of extensions: 5716866
Number of successful extensions: 16426
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 16181
Number of HSP's gapped (non-prelim): 120
length of query: 426
length of database: 191,569,459
effective HSP length: 120
effective length of query: 306
effective length of database: 126,815,539
effective search space: 38805554934
effective search space used: 38805554934
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)