Query 014381
Match_columns 425
No_of_seqs 173 out of 453
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 10:33:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014381.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014381hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lua_A Protein MALE-specific l 96.7 0.001 3.5E-08 50.6 3.1 38 238-276 4-48 (52)
2 2lua_A Protein MALE-specific l 96.3 0.0021 7.3E-08 48.9 2.9 37 153-189 4-47 (52)
3 3bo5_A Histone-lysine N-methyl 78.5 1.1 3.8E-05 43.0 2.9 38 238-275 59-119 (290)
4 1mvh_A Cryptic LOCI regulator 63.9 3.4 0.00012 39.8 2.6 39 237-275 65-130 (299)
5 3bo5_A Histone-lysine N-methyl 55.8 7.9 0.00027 37.1 3.6 37 153-189 59-119 (290)
6 3hna_A Histone-lysine N-methyl 54.7 5.8 0.0002 38.0 2.4 38 237-275 79-140 (287)
7 1ml9_A Histone H3 methyltransf 50.1 10 0.00035 36.2 3.4 22 237-258 46-68 (302)
8 2li3_A Potassium channel toxin 34.8 6 0.0002 27.0 -0.7 25 246-270 2-30 (30)
9 1mvh_A Cryptic LOCI regulator 28.9 29 0.00098 33.4 2.7 37 153-189 66-130 (299)
10 3h6l_A Histone-lysine N-methyl 26.4 31 0.0011 32.9 2.4 36 239-275 64-110 (278)
11 3hna_A Histone-lysine N-methyl 25.5 26 0.00088 33.6 1.7 36 153-189 80-140 (287)
12 1m0j_A Metallothionein MT_NC; 23.8 30 0.001 23.4 1.2 12 261-272 12-23 (28)
13 1t2y_A Metallothionein, MT; pr 22.0 34 0.0012 22.8 1.2 13 261-273 12-24 (26)
14 1ml9_A Histone H3 methyltransf 20.7 68 0.0023 30.6 3.6 20 153-172 47-67 (302)
No 1
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=96.66 E-value=0.001 Score=50.62 Aligned_cols=38 Identities=32% Similarity=0.924 Sum_probs=32.6
Q ss_pred CCCcccCCc-------cccchhhhhhhcCCccCCCCcccCCCCCCC
Q 014381 238 NKGCHCKKS-------GCLKKYCECFQANILCSENCRCLDCKNFEG 276 (425)
Q Consensus 238 ~kGC~CKKS-------~CLK~YCeCF~ag~~Cs~~CkC~~CkN~e~ 276 (425)
.++|.|..+ .|-...|.||.++..|+ +|+|.+|+|-..
T Consensus 4 k~~CrCG~~~~~~~~~TC~~~RCpCY~~~~sC~-~C~C~GCkNPhk 48 (52)
T 2lua_A 4 KPKCRCGISGSSNTLTTCRNSRCPCYKSYNSCA-GCHCVGCKNPHK 48 (52)
T ss_dssp CCCCCBTTBSCCCSSSTTTSTTCHHHHTTCCCS-SCCCSSCCCSCC
T ss_pred CcccccCcccCCCCceeEcCCccceecCCCccC-CCEecCcCCCCc
Confidence 468888544 79999999999999998 799999999643
No 2
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=96.32 E-value=0.0021 Score=48.92 Aligned_cols=37 Identities=35% Similarity=0.977 Sum_probs=31.5
Q ss_pred CccccccCc-------cccccchhhhcCCCCCCCCCCCCCCCCc
Q 014381 153 QKQCNCRNS-------RCLKLYCECFAAGIYCDGCNCVNCHNNV 189 (425)
Q Consensus 153 ~K~CnCKKS-------kCLKLYCECFaaG~~C~~CnC~nC~N~~ 189 (425)
++.|.|..+ .|--..|.||.+|.-|.+|+|.+|+|..
T Consensus 4 k~~CrCG~~~~~~~~~TC~~~RCpCY~~~~sC~~C~C~GCkNPh 47 (52)
T 2lua_A 4 KPKCRCGISGSSNTLTTCRNSRCPCYKSYNSCAGCHCVGCKNPH 47 (52)
T ss_dssp CCCCCBTTBSCCCSSSTTTSTTCHHHHTTCCCSSCCCSSCCCSC
T ss_pred CcccccCcccCCCCceeEcCCccceecCCCccCCCEecCcCCCC
Confidence 456777544 6888999999999999999999999964
No 3
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=78.51 E-value=1.1 Score=43.05 Aligned_cols=38 Identities=37% Similarity=0.897 Sum_probs=30.6
Q ss_pred CCCcccCCccccchhhhhhhcCC----------------------ccCCCCcc-cCCCCCC
Q 014381 238 NKGCHCKKSGCLKKYCECFQANI----------------------LCSENCRC-LDCKNFE 275 (425)
Q Consensus 238 ~kGC~CKKS~CLK~YCeCF~ag~----------------------~Cs~~CkC-~~CkN~e 275 (425)
..||+|.+..|....|.|++.+. -|++.|.| ..|.|.-
T Consensus 59 ~~gC~C~~~~C~~~~C~C~~~~~~y~~~~~l~~~~~~~~~~~~~~EC~~~C~C~~~C~Nr~ 119 (290)
T 3bo5_A 59 FPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKYAEPVFECNVLCRCSDHCRNRV 119 (290)
T ss_dssp CCCCCCCSSCCCTTTCGGGTTSCSBCTTSCBCC-----CCCCCEECCCTTCCSCTTCTTCC
T ss_pred CCCCCCCCCCcCCCCCcchhhcCccCccccccccccccccCCceEeCCCCCCCCCCCCCeE
Confidence 36999999999999999997653 36678888 6898864
No 4
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=63.90 E-value=3.4 Score=39.83 Aligned_cols=39 Identities=33% Similarity=0.919 Sum_probs=31.2
Q ss_pred cCCCcccCC-ccccc---hhhhhhhcC----------------------CccCCCCccc-CCCCCC
Q 014381 237 HNKGCHCKK-SGCLK---KYCECFQAN----------------------ILCSENCRCL-DCKNFE 275 (425)
Q Consensus 237 ~~kGC~CKK-S~CLK---~YCeCF~ag----------------------~~Cs~~CkC~-~CkN~e 275 (425)
...||+|.. ..|.. .-|+|.+.. .-|++.|.|. .|.|.-
T Consensus 65 ~~~gC~C~~~~~C~~~~~~~C~C~~~~~~~~~~~y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~ 130 (299)
T 1mvh_A 65 FQSGCNCSSLGGCDLNNPSRCECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCSCSMECPNRV 130 (299)
T ss_dssp GCCCCCCCCSSSSCTTCTTTCSSSTTCCSSCCCSBCTTSSBCTTCCSEEECCCTTSCSCTTCTTCT
T ss_pred CCCCCcCcCCCCcCCCCCCCCccccccccccccccCCCCceeecCCCCeEeCCCCCCCCCCcCCcc
Confidence 357999986 68997 789998653 4699999995 899964
No 5
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=55.79 E-value=7.9 Score=37.11 Aligned_cols=37 Identities=35% Similarity=0.907 Sum_probs=28.2
Q ss_pred CccccccCccccccchhhhcCCCC----------------------CC-CCCC-CCCCCCc
Q 014381 153 QKQCNCRNSRCLKLYCECFAAGIY----------------------CD-GCNC-VNCHNNV 189 (425)
Q Consensus 153 ~K~CnCKKSkCLKLYCECFaaG~~----------------------C~-~CnC-~nC~N~~ 189 (425)
..+|+|.+..|...-|.|+..+.. |+ .|.| ..|.|..
T Consensus 59 ~~gC~C~~~~C~~~~C~C~~~~~~y~~~~~l~~~~~~~~~~~~~~EC~~~C~C~~~C~Nr~ 119 (290)
T 3bo5_A 59 FPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKYAEPVFECNVLCRCSDHCRNRV 119 (290)
T ss_dssp CCCCCCCSSCCCTTTCGGGTTSCSBCTTSCBCC-----CCCCCEECCCTTCCSCTTCTTCC
T ss_pred CCCCCCCCCCcCCCCCcchhhcCccCccccccccccccccCCceEeCCCCCCCCCCCCCeE
Confidence 358999998999889999866432 55 5777 4888865
No 6
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=54.66 E-value=5.8 Score=38.03 Aligned_cols=38 Identities=32% Similarity=0.781 Sum_probs=30.0
Q ss_pred cCCCcccCCccccchhhhhhhc-----------------------CCccCCCCcc-cCCCCCC
Q 014381 237 HNKGCHCKKSGCLKKYCECFQA-----------------------NILCSENCRC-LDCKNFE 275 (425)
Q Consensus 237 ~~kGC~CKKS~CLK~YCeCF~a-----------------------g~~Cs~~CkC-~~CkN~e 275 (425)
+..||.|+. .|...-|.|.+. -.-|++.|.| ..|.|..
T Consensus 79 ~~~gC~C~~-~C~~~~C~C~~~~~~~~y~~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~ 140 (287)
T 3hna_A 79 HLQYCVCID-DCSSSNCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRV 140 (287)
T ss_dssp GCCCCCCSS-SSCSTTCHHHHHTSSCCBCTTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSCS
T ss_pred CCCCCcCcC-CCCCCCCcCcccCcccccCCCCcccccccccCCceEEecCCCCCCCCCCCCcc
Confidence 346999984 799989999863 1359999999 5899974
No 7
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=50.12 E-value=10 Score=36.25 Aligned_cols=22 Identities=27% Similarity=0.988 Sum_probs=17.4
Q ss_pred cCCCcccCCc-cccchhhhhhhc
Q 014381 237 HNKGCHCKKS-GCLKKYCECFQA 258 (425)
Q Consensus 237 ~~kGC~CKKS-~CLK~YCeCF~a 258 (425)
...||+|... .|...-|.|.+.
T Consensus 46 ~~~gC~C~~~~~C~~~~C~C~~~ 68 (302)
T 1ml9_A 46 FRVGCSCASDEECMYSTCQCLDE 68 (302)
T ss_dssp GCCCCCCSSTTGGGSTTSGGGTT
T ss_pred cCCCccCcCCCCcCCCCCcChhh
Confidence 3579999874 798888999753
No 8
>2li3_A Potassium channel toxin kappa-KTX3.1; alpha/alpha motif, alpha scorpion toxin, voltage gated potas channel alpha toxin; NMR {Tityus trivittatus} PDB: 2lka_A 2lo7_A
Probab=34.82 E-value=6 Score=26.95 Aligned_cols=25 Identities=40% Similarity=1.020 Sum_probs=19.1
Q ss_pred ccccchhhhhhhcC----CccCCCCcccC
Q 014381 246 SGCLKKYCECFQAN----ILCSENCRCLD 270 (425)
Q Consensus 246 S~CLK~YCeCF~ag----~~Cs~~CkC~~ 270 (425)
|+|.+-||.=.-.+ .+|-.+|||+.
T Consensus 2 sgc~peyca~~cr~kvsq~yclknckc~~ 30 (30)
T 2li3_A 2 SGCMPEYCAGQCRGKVSQDYCLKNCRCIR 30 (30)
T ss_dssp CSSCHHHHHHHSCTTHHHHHHHHHSCCCC
T ss_pred CCcchhHhhhheeeeechHHHHhcCcCCC
Confidence 78999999765444 37888999974
No 9
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=28.94 E-value=29 Score=33.35 Aligned_cols=37 Identities=38% Similarity=0.906 Sum_probs=28.1
Q ss_pred CccccccC-ccccc---cchhhhcCC----------------------CCCC-CCCCC-CCCCCc
Q 014381 153 QKQCNCRN-SRCLK---LYCECFAAG----------------------IYCD-GCNCV-NCHNNV 189 (425)
Q Consensus 153 ~K~CnCKK-SkCLK---LYCECFaaG----------------------~~C~-~CnC~-nC~N~~ 189 (425)
..+|+|.. ..|+. .-|+|.... .-|+ .|.|. .|.|..
T Consensus 66 ~~gC~C~~~~~C~~~~~~~C~C~~~~~~~~~~~y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~ 130 (299)
T 1mvh_A 66 QSGCNCSSLGGCDLNNPSRCECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCSCSMECPNRV 130 (299)
T ss_dssp CCCCCCCCSSSSCTTCTTTCSSSTTCCSSCCCSBCTTSSBCTTCCSEEECCCTTSCSCTTCTTCT
T ss_pred CCCCcCcCCCCcCCCCCCCCccccccccccccccCCCCceeecCCCCeEeCCCCCCCCCCcCCcc
Confidence 46899986 58997 789997442 2387 79997 899865
No 10
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=26.44 E-value=31 Score=32.93 Aligned_cols=36 Identities=28% Similarity=0.492 Sum_probs=29.5
Q ss_pred CCcccCCc----------cccchhhhhhhcCCccCCCCcc-cCCCCCC
Q 014381 239 KGCHCKKS----------GCLKKYCECFQANILCSENCRC-LDCKNFE 275 (425)
Q Consensus 239 kGC~CKKS----------~CLK~YCeCF~ag~~Cs~~CkC-~~CkN~e 275 (425)
.-|.|+.. .|-. -|.+...-+-|++.|.| ..|.|.-
T Consensus 64 ~~C~C~~~~~~~~~~~~~~C~~-~C~nr~~~~EC~~~C~C~~~C~Nr~ 110 (278)
T 3h6l_A 64 MQCECTPLSKDERAQGEIACGE-DCLNRLLMIECSSRCPNGDYCSNRR 110 (278)
T ss_dssp -CCCCCCCCHHHHHHTCCSSCT-TCTTGGGTBCCCTTCTTGGGCSSCT
T ss_pred ceeeccCCCcccccccCCCCCC-CCCCcceEeccCCCCCcCCCCCCcc
Confidence 57999863 7876 58899999999999999 5899975
No 11
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=25.53 E-value=26 Score=33.55 Aligned_cols=36 Identities=39% Similarity=1.050 Sum_probs=27.0
Q ss_pred CccccccCccccccchhhhcC---------C-------------CC-CC-CCCCC-CCCCCc
Q 014381 153 QKQCNCRNSRCLKLYCECFAA---------G-------------IY-CD-GCNCV-NCHNNV 189 (425)
Q Consensus 153 ~K~CnCKKSkCLKLYCECFaa---------G-------------~~-C~-~CnC~-nC~N~~ 189 (425)
..+|+|+. .|...-|.|... | +| |+ .|.|. +|.|..
T Consensus 80 ~~gC~C~~-~C~~~~C~C~~~~~~~~y~~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~ 140 (287)
T 3hna_A 80 LQYCVCID-DCSSSNCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRV 140 (287)
T ss_dssp CCCCCCSS-SSCSTTCHHHHHTSSCCBCTTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSCS
T ss_pred CCCCcCcC-CCCCCCCcCcccCcccccCCCCcccccccccCCceEEecCCCCCCCCCCCCcc
Confidence 46999984 698888999741 1 23 87 79996 899875
No 12
>1m0j_A Metallothionein MT_NC; cadmium thiolate-cluster, metal binding protein; NMR {Notothenia coriiceps} SCOP: g.46.1.1
Probab=23.81 E-value=30 Score=23.39 Aligned_cols=12 Identities=33% Similarity=1.229 Sum_probs=8.5
Q ss_pred ccCCCCcccCCC
Q 014381 261 LCSENCRCLDCK 272 (425)
Q Consensus 261 ~Cs~~CkC~~Ck 272 (425)
.|...|||.+|+
T Consensus 12 ~C~~sCkC~~C~ 23 (28)
T 1m0j_A 12 NCGGSCTCTNCS 23 (28)
T ss_dssp CCSSSCCSSSCC
T ss_pred cCCCccccCCcc
Confidence 566777777776
No 13
>1t2y_A Metallothionein, MT; protein fold, no secondary structural elements, metal binding protein; NMR {Synthetic} SCOP: g.46.1.1
Probab=21.96 E-value=34 Score=22.81 Aligned_cols=13 Identities=31% Similarity=1.119 Sum_probs=10.9
Q ss_pred ccCCCCcccCCCC
Q 014381 261 LCSENCRCLDCKN 273 (425)
Q Consensus 261 ~Cs~~CkC~~CkN 273 (425)
.|..+|.|.+|..
T Consensus 12 ~Cg~~CsC~gC~t 24 (26)
T 1t2y_A 12 NCGSGCSCSNCGS 24 (26)
T ss_dssp CCSSSCCSSTTSC
T ss_pred cCCCCccccCccc
Confidence 5788999999964
No 14
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=20.71 E-value=68 Score=30.55 Aligned_cols=20 Identities=25% Similarity=0.974 Sum_probs=16.0
Q ss_pred CccccccCc-cccccchhhhc
Q 014381 153 QKQCNCRNS-RCLKLYCECFA 172 (425)
Q Consensus 153 ~K~CnCKKS-kCLKLYCECFa 172 (425)
..+|+|... .|+..-|.|..
T Consensus 47 ~~gC~C~~~~~C~~~~C~C~~ 67 (302)
T 1ml9_A 47 RVGCSCASDEECMYSTCQCLD 67 (302)
T ss_dssp CCCCCCSSTTGGGSTTSGGGT
T ss_pred CCCccCcCCCCcCCCCCcChh
Confidence 468999874 79888899974
Done!