Query 014387
Match_columns 425
No_of_seqs 255 out of 1078
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 10:40:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s9f_A Tryparedoxin; thioredox 99.9 3.2E-21 1.1E-25 172.4 14.6 127 48-191 34-164 (165)
2 1i5g_A Tryparedoxin II; electr 99.9 7.1E-21 2.4E-25 164.1 15.7 128 48-191 13-144 (144)
3 1o8x_A Tryparedoxin, TRYX, TXN 99.8 1E-20 3.5E-25 163.8 14.4 128 48-192 14-145 (146)
4 1o73_A Tryparedoxin; electron 99.8 2.2E-20 7.4E-25 160.5 14.6 127 48-191 14-144 (144)
5 3eur_A Uncharacterized protein 99.8 6.3E-19 2.2E-23 151.8 11.7 117 42-175 8-131 (142)
6 3ewl_A Uncharacterized conserv 99.8 3.2E-18 1.1E-22 146.6 12.4 115 42-173 4-125 (142)
7 4fo5_A Thioredoxin-like protei 99.8 2.2E-18 7.6E-23 148.5 9.8 115 42-175 10-131 (143)
8 2lrt_A Uncharacterized protein 99.7 2.2E-17 7.5E-22 144.9 12.5 112 44-174 14-130 (152)
9 3fw2_A Thiol-disulfide oxidore 99.7 1.4E-17 4.9E-22 144.5 10.4 114 42-174 8-133 (150)
10 3eyt_A Uncharacterized protein 99.7 8.4E-18 2.9E-22 146.4 7.1 111 52-173 17-133 (158)
11 2lrn_A Thiol:disulfide interch 99.7 4.3E-17 1.5E-21 141.8 11.3 114 42-174 6-126 (152)
12 2lus_A Thioredoxion; CR-Trp16, 99.5 2E-18 6.8E-23 147.4 0.0 117 48-180 9-131 (143)
13 3lor_A Thiol-disulfide isomera 99.7 2.1E-17 7.1E-22 144.0 6.2 121 42-173 6-136 (160)
14 3raz_A Thioredoxin-related pro 99.7 1.8E-16 6.3E-21 137.7 11.4 105 51-173 12-121 (151)
15 3hcz_A Possible thiol-disulfid 99.7 2.6E-17 9E-22 140.6 4.9 116 42-174 8-128 (148)
16 3fkf_A Thiol-disulfide oxidore 99.7 1.4E-16 4.7E-21 136.2 9.0 115 42-175 8-132 (148)
17 2f9s_A Thiol-disulfide oxidore 99.7 2.4E-16 8.2E-21 136.4 10.5 112 43-173 4-119 (151)
18 3gl3_A Putative thiol:disulfid 99.7 4.8E-16 1.6E-20 134.2 12.3 113 41-173 5-121 (152)
19 3gkn_A Bacterioferritin comigr 99.7 2.3E-16 7.8E-21 138.7 10.4 112 42-173 10-140 (163)
20 1nm3_A Protein HI0572; hybrid, 99.7 1.2E-15 4E-20 144.0 15.7 185 42-270 6-212 (241)
21 3drn_A Peroxiredoxin, bacterio 99.7 3.6E-16 1.2E-20 138.1 11.4 113 41-173 4-126 (161)
22 2ggt_A SCO1 protein homolog, m 99.6 2E-15 6.9E-20 131.8 14.6 117 48-173 8-142 (164)
23 3kcm_A Thioredoxin family prot 99.6 9.8E-16 3.4E-20 132.5 11.5 114 42-173 5-122 (154)
24 3u5r_E Uncharacterized protein 99.6 3.9E-16 1.3E-20 145.7 9.6 121 41-173 34-159 (218)
25 4g2e_A Peroxiredoxin; redox pr 99.6 1.1E-16 3.7E-21 142.2 4.9 113 41-173 6-134 (157)
26 3or5_A Thiol:disulfide interch 99.6 1.5E-15 5.2E-20 132.5 12.0 113 41-173 10-132 (165)
27 2h30_A Thioredoxin, peptide me 99.6 4.4E-16 1.5E-20 136.0 8.6 115 46-173 21-137 (164)
28 4evm_A Thioredoxin family prot 99.6 1.1E-15 3.9E-20 127.5 10.6 112 48-173 7-120 (138)
29 2f8a_A Glutathione peroxidase 99.6 1.6E-15 5.4E-20 141.4 12.6 129 40-174 21-189 (208)
30 2rli_A SCO2 protein homolog, m 99.6 5.5E-15 1.9E-19 130.1 15.2 117 48-173 11-145 (171)
31 3erw_A Sporulation thiol-disul 99.6 1.6E-15 5.6E-20 128.7 10.8 116 41-173 11-130 (145)
32 2lja_A Putative thiol-disulfid 99.6 1.8E-15 6.1E-20 130.5 10.6 115 42-174 6-125 (152)
33 3lwa_A Secreted thiol-disulfid 99.6 2.4E-15 8.1E-20 134.9 11.6 117 43-173 35-162 (183)
34 2cvb_A Probable thiol-disulfid 99.6 1.8E-15 6.2E-20 136.2 10.5 119 42-173 10-132 (188)
35 3cmi_A Peroxiredoxin HYR1; thi 99.6 1.7E-15 5.9E-20 134.8 10.2 115 48-173 17-149 (171)
36 2b5x_A YKUV protein, TRXY; thi 99.6 1.7E-15 5.7E-20 129.1 9.6 117 42-173 4-126 (148)
37 3ha9_A Uncharacterized thiored 99.6 1.2E-15 4.1E-20 134.1 8.8 109 48-172 22-145 (165)
38 3ztl_A Thioredoxin peroxidase; 99.6 1.1E-15 3.7E-20 143.4 9.0 121 40-174 41-176 (222)
39 3me7_A Putative uncharacterize 99.6 4.6E-15 1.6E-19 133.1 12.6 122 42-173 4-142 (170)
40 3dwv_A Glutathione peroxidase- 99.6 1.8E-16 6E-21 144.1 3.3 117 48-173 31-164 (187)
41 2c0d_A Thioredoxin peroxidase 99.6 1.2E-15 4.1E-20 143.9 9.1 120 41-174 27-162 (221)
42 2pn8_A Peroxiredoxin-4; thiore 99.6 1.5E-15 5E-20 141.8 9.3 120 41-174 21-155 (211)
43 1lu4_A Soluble secreted antige 99.6 2.7E-15 9.1E-20 126.3 9.9 103 48-171 9-113 (136)
44 2i3y_A Epididymal secretory gl 99.6 4.3E-15 1.5E-19 140.0 11.5 120 48-174 40-193 (215)
45 1jfu_A Thiol:disulfide interch 99.6 2.6E-15 8.8E-20 134.8 9.5 115 42-173 37-159 (186)
46 3ixr_A Bacterioferritin comigr 99.6 3.6E-15 1.2E-19 134.9 10.3 105 49-173 37-156 (179)
47 1zof_A Alkyl hydroperoxide-red 99.6 1.1E-15 3.6E-20 139.7 6.8 119 42-174 4-139 (198)
48 3hdc_A Thioredoxin family prot 99.6 4E-15 1.4E-19 130.3 9.8 110 42-173 18-131 (158)
49 3qpm_A Peroxiredoxin; oxidored 99.6 3.8E-15 1.3E-19 142.1 10.0 120 41-174 50-184 (240)
50 1xvw_A Hypothetical protein RV 99.6 2.3E-15 7.7E-20 131.7 7.8 116 41-174 11-138 (160)
51 2ywi_A Hypothetical conserved 99.6 2.3E-15 8E-20 135.9 8.0 120 42-173 21-146 (196)
52 1zye_A Thioredoxin-dependent p 99.6 3.4E-15 1.2E-19 140.0 9.0 120 41-174 29-163 (220)
53 2v1m_A Glutathione peroxidase; 99.6 2.8E-14 9.4E-19 125.2 14.3 120 42-173 8-148 (169)
54 1n8j_A AHPC, alkyl hydroperoxi 99.6 3.5E-15 1.2E-19 135.9 8.8 117 42-174 4-134 (186)
55 2l5o_A Putative thioredoxin; s 99.6 4.3E-15 1.5E-19 128.3 8.9 113 42-172 5-121 (153)
56 1qmv_A Human thioredoxin perox 99.6 4.2E-15 1.4E-19 135.8 9.3 118 42-173 8-140 (197)
57 2h01_A 2-Cys peroxiredoxin; th 99.6 3.7E-15 1.3E-19 135.5 8.8 119 42-174 3-137 (192)
58 1uul_A Tryparedoxin peroxidase 99.6 4.3E-15 1.5E-19 136.5 9.2 119 42-174 9-143 (202)
59 1zzo_A RV1677; thioredoxin fol 99.6 7E-15 2.4E-19 123.2 9.3 104 48-171 10-115 (136)
60 2obi_A PHGPX, GPX-4, phospholi 99.6 7.9E-15 2.7E-19 132.1 10.2 120 42-173 24-165 (183)
61 3kij_A Probable glutathione pe 99.6 2.8E-14 9.5E-19 128.4 13.6 123 41-173 14-151 (180)
62 1xzo_A BSSCO, hypothetical pro 99.6 1E-14 3.5E-19 128.7 10.6 114 48-173 18-151 (174)
63 2vup_A Glutathione peroxidase- 99.6 8E-15 2.7E-19 133.3 10.1 114 48-173 33-166 (190)
64 3kh7_A Thiol:disulfide interch 99.6 6.2E-15 2.1E-19 132.6 9.2 108 42-173 33-148 (176)
65 1we0_A Alkyl hydroperoxide red 99.6 3.7E-15 1.3E-19 134.7 7.8 117 42-174 4-135 (187)
66 1psq_A Probable thiol peroxida 99.6 7.4E-15 2.5E-19 130.1 9.5 112 42-174 19-142 (163)
67 2b7k_A SCO1 protein; metalloch 99.6 1.9E-14 6.5E-19 132.3 12.4 114 48-173 26-160 (200)
68 2ls5_A Uncharacterized protein 99.3 2.7E-16 9.3E-21 137.5 0.0 115 42-174 10-131 (159)
69 2p5q_A Glutathione peroxidase 99.6 3.4E-14 1.2E-18 124.7 13.4 120 43-173 10-149 (170)
70 2bmx_A Alkyl hydroperoxidase C 99.6 4.7E-15 1.6E-19 135.3 8.1 105 54-174 36-148 (195)
71 2r37_A Glutathione peroxidase 99.6 2.9E-14 9.9E-19 133.2 13.5 119 48-173 22-174 (207)
72 3ia1_A THIO-disulfide isomeras 99.6 2E-14 6.9E-19 124.4 11.5 113 43-174 9-126 (154)
73 1tp9_A Peroxiredoxin, PRX D (t 99.5 1.4E-14 4.8E-19 128.7 10.2 115 41-174 6-143 (162)
74 2gs3_A PHGPX, GPX-4, phospholi 99.5 5.6E-15 1.9E-19 133.7 7.4 120 42-173 26-167 (185)
75 2p31_A CL683, glutathione pero 99.5 2E-15 6.9E-20 136.2 4.1 120 42-173 26-162 (181)
76 2hyx_A Protein DIPZ; thioredox 99.5 1.3E-14 4.3E-19 146.5 9.9 118 42-173 54-180 (352)
77 3p7x_A Probable thiol peroxida 99.5 1.1E-14 3.6E-19 129.5 7.9 112 41-174 22-145 (166)
78 4gqc_A Thiol peroxidase, perox 99.5 9.9E-16 3.4E-20 137.4 0.8 113 41-173 7-136 (164)
79 2i81_A 2-Cys peroxiredoxin; st 99.5 2.2E-14 7.5E-19 133.9 9.9 120 41-174 23-158 (213)
80 4hde_A SCO1/SENC family lipopr 99.5 7.8E-14 2.7E-18 125.5 13.0 123 42-172 9-148 (170)
81 3tjj_A Peroxiredoxin-4; thiore 99.5 1.1E-14 3.8E-19 140.4 7.2 119 41-173 64-197 (254)
82 2k6v_A Putative cytochrome C o 99.5 3.6E-14 1.2E-18 124.8 9.9 115 47-174 20-153 (172)
83 2wfc_A Peroxiredoxin 5, PRDX5; 99.5 3.3E-14 1.1E-18 128.1 9.6 113 42-173 6-138 (167)
84 2yzh_A Probable thiol peroxida 99.5 2.7E-14 9.1E-19 127.3 8.3 111 42-174 24-149 (171)
85 1q98_A Thiol peroxidase, TPX; 99.5 1.4E-14 4.8E-19 128.8 6.3 113 42-175 20-147 (165)
86 3zrd_A Thiol peroxidase; oxido 99.5 1.2E-14 4.3E-19 134.4 6.1 114 41-175 54-182 (200)
87 1kng_A Thiol:disulfide interch 99.5 3.6E-14 1.2E-18 122.6 8.4 99 54-173 33-133 (156)
88 2a4v_A Peroxiredoxin DOT5; yea 99.5 2.4E-14 8.2E-19 125.9 6.9 111 42-174 10-133 (159)
89 2jsy_A Probable thiol peroxida 99.5 1.8E-14 6.2E-19 127.3 5.6 111 42-174 21-144 (167)
90 2b1k_A Thiol:disulfide interch 99.5 5.8E-14 2E-18 123.7 8.7 110 42-173 25-141 (168)
91 1xvq_A Thiol peroxidase; thior 99.5 3.1E-14 1E-18 127.9 6.5 110 42-174 21-145 (175)
92 1prx_A HORF6; peroxiredoxin, h 99.5 1.6E-13 5.5E-18 129.5 10.5 118 42-174 8-147 (224)
93 3mng_A Peroxiredoxin-5, mitoch 99.5 1.2E-13 4.3E-18 125.6 8.6 114 42-174 18-153 (173)
94 2v2g_A Peroxiredoxin 6; oxidor 99.4 1.4E-13 4.7E-18 131.2 8.4 117 42-174 6-143 (233)
95 3idv_A Protein disulfide-isome 99.4 5.1E-13 1.7E-17 123.9 12.0 155 61-267 30-195 (241)
96 3a2v_A Probable peroxiredoxin; 99.4 1.5E-13 5.2E-18 132.4 8.8 117 42-173 8-139 (249)
97 3uma_A Hypothetical peroxiredo 99.4 2.4E-13 8.1E-18 124.9 8.8 134 40-199 27-182 (184)
98 1xcc_A 1-Cys peroxiredoxin; un 99.4 1.5E-13 5.2E-18 129.3 7.7 118 42-174 6-144 (220)
99 2pwj_A Mitochondrial peroxired 99.4 2E-13 6.8E-18 123.1 6.6 102 54-174 33-151 (171)
100 3sbc_A Peroxiredoxin TSA1; alp 99.3 2E-12 6.8E-17 122.4 9.7 117 42-172 26-157 (216)
101 3tue_A Tryparedoxin peroxidase 99.3 1.1E-11 3.9E-16 117.5 9.5 117 42-172 29-161 (219)
102 3ul3_B Thioredoxin, thioredoxi 99.3 2.2E-11 7.5E-16 103.3 10.3 87 44-173 23-111 (128)
103 3hxs_A Thioredoxin, TRXP; elec 99.2 1.7E-11 5.9E-16 104.9 8.7 81 50-172 38-120 (141)
104 2ju5_A Thioredoxin disulfide i 99.2 4.8E-12 1.6E-16 111.6 5.2 91 52-173 36-132 (154)
105 1z6n_A Hypothetical protein PA 99.2 1.2E-11 3.9E-16 112.2 6.9 76 57-172 48-125 (167)
106 3keb_A Probable thiol peroxida 99.2 1.3E-11 4.5E-16 117.3 7.3 113 41-176 24-155 (224)
107 4eo3_A Bacterioferritin comigr 99.2 4E-11 1.4E-15 119.3 10.5 104 47-172 8-116 (322)
108 3f9u_A Putative exported cytoc 99.2 2.3E-12 8E-17 114.5 1.0 103 56-174 40-147 (172)
109 2l57_A Uncharacterized protein 99.2 7.4E-11 2.5E-15 99.2 9.2 75 58-172 21-97 (126)
110 2fwh_A Thiol:disulfide interch 99.1 6.5E-11 2.2E-15 101.4 7.3 80 53-171 21-105 (134)
111 3fk8_A Disulphide isomerase; A 99.1 7.7E-11 2.6E-15 100.0 7.7 76 61-175 27-109 (133)
112 3zzx_A Thioredoxin; oxidoreduc 99.0 4.5E-10 1.5E-14 93.6 6.3 69 61-173 18-88 (105)
113 2l5l_A Thioredoxin; structural 99.0 1.1E-09 3.7E-14 93.8 8.5 68 62-171 37-106 (136)
114 2kuc_A Putative disulphide-iso 99.0 4.9E-10 1.7E-14 94.2 6.1 79 55-173 19-102 (130)
115 4f82_A Thioredoxin reductase; 98.9 1.2E-09 4.3E-14 100.1 7.7 100 54-174 37-155 (176)
116 3f3q_A Thioredoxin-1; His TAG, 98.9 2E-09 6.8E-14 88.7 7.7 68 62-173 23-92 (109)
117 3qfa_C Thioredoxin; protein-pr 98.9 1.3E-09 4.4E-14 91.0 6.5 69 61-173 29-99 (116)
118 3gix_A Thioredoxin-like protei 98.9 1.1E-09 3.7E-14 96.4 6.1 67 62-171 22-90 (149)
119 1sen_A Thioredoxin-like protei 98.9 3E-10 1E-14 101.4 2.4 78 55-173 38-119 (164)
120 2voc_A Thioredoxin; electron t 98.9 1.5E-09 5E-14 89.6 6.4 68 62-172 16-85 (112)
121 2pu9_C TRX-F, thioredoxin F-ty 98.9 1.9E-09 6.6E-14 88.3 7.0 70 60-172 21-92 (111)
122 1zma_A Bacterocin transport ac 98.9 2.3E-09 7.9E-14 89.1 7.5 72 62-172 28-101 (118)
123 3die_A Thioredoxin, TRX; elect 98.9 4E-09 1.4E-13 84.8 8.3 68 62-172 18-87 (106)
124 1qgv_A Spliceosomal protein U5 98.9 2.4E-09 8.2E-14 93.4 7.0 69 62-173 22-92 (142)
125 1nsw_A Thioredoxin, TRX; therm 98.9 4.5E-09 1.5E-13 84.7 8.1 68 62-172 16-85 (105)
126 4euy_A Uncharacterized protein 98.9 2.2E-09 7.5E-14 87.4 5.8 68 62-173 17-86 (105)
127 2trx_A Thioredoxin; electron t 98.9 4.7E-09 1.6E-13 85.0 7.7 68 62-172 19-88 (108)
128 2lst_A Thioredoxin; structural 98.4 2.4E-10 8.4E-15 96.3 0.0 78 53-170 9-92 (130)
129 1x5d_A Protein disulfide-isome 98.9 5E-09 1.7E-13 88.0 8.0 71 62-171 24-96 (133)
130 3d6i_A Monothiol glutaredoxin- 98.9 3.8E-09 1.3E-13 86.4 7.1 69 62-172 20-90 (112)
131 1x5e_A Thioredoxin domain cont 98.8 8.4E-09 2.9E-13 86.5 9.0 68 61-171 21-90 (126)
132 1dby_A Chloroplast thioredoxin 98.8 6.6E-09 2.2E-13 84.0 8.0 68 62-172 18-87 (107)
133 2dj3_A Protein disulfide-isome 98.8 4E-09 1.4E-13 88.9 6.9 69 62-170 24-94 (133)
134 1t00_A Thioredoxin, TRX; redox 98.8 7E-09 2.4E-13 84.7 8.1 68 62-172 22-91 (112)
135 3qou_A Protein YBBN; thioredox 98.8 2.6E-09 8.9E-14 102.2 6.3 68 62-172 25-94 (287)
136 1w4v_A Thioredoxin, mitochondr 98.8 7.6E-09 2.6E-13 86.4 8.4 68 62-172 30-99 (119)
137 3tco_A Thioredoxin (TRXA-1); d 98.8 9.2E-09 3.2E-13 82.9 8.5 69 62-173 20-90 (109)
138 1gh2_A Thioredoxin-like protei 98.8 6.9E-09 2.4E-13 84.4 7.7 67 62-172 20-88 (107)
139 3cxg_A Putative thioredoxin; m 98.8 2.3E-09 7.8E-14 92.0 4.9 73 58-172 35-110 (133)
140 3d22_A TRXH4, thioredoxin H-ty 98.8 2.5E-09 8.6E-14 91.2 4.9 68 61-172 44-113 (139)
141 2i4a_A Thioredoxin; acidophIle 98.8 1.4E-08 4.9E-13 81.6 9.2 68 62-172 19-88 (107)
142 3gnj_A Thioredoxin domain prot 98.8 9.9E-09 3.4E-13 83.3 8.2 68 62-172 21-90 (111)
143 1xfl_A Thioredoxin H1; AT3G510 98.8 9.6E-09 3.3E-13 86.9 8.1 67 62-172 37-105 (124)
144 2dj1_A Protein disulfide-isome 98.8 6.9E-09 2.4E-13 88.2 7.2 70 62-171 33-104 (140)
145 3m9j_A Thioredoxin; oxidoreduc 98.8 7.6E-09 2.6E-13 83.2 6.9 69 60-172 17-87 (105)
146 2wz9_A Glutaredoxin-3; protein 98.8 9.1E-09 3.1E-13 90.0 7.9 67 62-172 31-99 (153)
147 1thx_A Thioredoxin, thioredoxi 98.8 1.1E-08 3.8E-13 83.4 7.9 68 62-172 24-93 (115)
148 1xwb_A Thioredoxin; dimerizati 98.8 1.2E-08 4.1E-13 81.9 7.9 69 61-172 18-88 (106)
149 3emx_A Thioredoxin; structural 98.8 3.9E-09 1.3E-13 90.5 5.1 76 61-173 30-107 (135)
150 3apo_A DNAJ homolog subfamily 98.8 4.4E-08 1.5E-12 106.8 14.6 149 58-264 450-605 (780)
151 2o8v_B Thioredoxin 1; disulfid 98.8 5.6E-09 1.9E-13 89.0 6.0 68 62-172 39-108 (128)
152 2ppt_A Thioredoxin-2; thiredox 98.8 1.1E-08 3.8E-13 90.3 8.1 68 62-172 63-132 (155)
153 2f51_A Thioredoxin; electron t 98.8 7.5E-09 2.6E-13 86.7 6.6 68 62-172 22-94 (118)
154 1faa_A Thioredoxin F; electron 98.8 7.6E-09 2.6E-13 86.4 6.6 69 61-172 35-105 (124)
155 2yzu_A Thioredoxin; redox prot 98.8 1.6E-08 5.5E-13 81.2 8.3 68 62-172 17-86 (109)
156 3aps_A DNAJ homolog subfamily 98.8 9.8E-09 3.3E-13 85.3 7.1 67 62-170 20-88 (122)
157 3p2a_A Thioredoxin 2, putative 98.8 9.7E-09 3.3E-13 88.8 7.2 69 61-172 53-123 (148)
158 2oe3_A Thioredoxin-3; electron 98.8 1.1E-08 3.7E-13 85.4 7.2 67 62-172 29-97 (114)
159 1ep7_A Thioredoxin CH1, H-type 98.8 1.1E-08 3.6E-13 83.4 7.0 67 63-172 24-92 (112)
160 3ph9_A Anterior gradient prote 98.8 9.3E-09 3.2E-13 91.7 7.1 93 61-200 42-139 (151)
161 1syr_A Thioredoxin; SGPP, stru 98.7 2.1E-08 7E-13 82.5 8.0 67 62-172 25-93 (112)
162 1fb6_A Thioredoxin M; electron 98.7 2.5E-08 8.6E-13 79.9 8.2 68 62-172 17-86 (105)
163 2vlu_A Thioredoxin, thioredoxi 98.7 1.8E-08 6.1E-13 83.7 7.6 67 62-172 33-101 (122)
164 2e0q_A Thioredoxin; electron t 98.7 2.3E-08 7.9E-13 79.4 7.9 67 62-172 15-83 (104)
165 1a8l_A Protein disulfide oxido 98.7 5.4E-08 1.9E-12 89.4 11.5 155 60-265 19-181 (226)
166 3uvt_A Thioredoxin domain-cont 98.7 1.6E-08 5.6E-13 81.8 7.0 71 62-172 20-92 (111)
167 3ira_A Conserved protein; meth 98.7 2.7E-08 9.1E-13 90.9 8.9 84 56-173 32-120 (173)
168 2l6c_A Thioredoxin; oxidoreduc 98.7 1.5E-08 5.1E-13 83.5 6.5 67 62-172 18-86 (110)
169 2dml_A Protein disulfide-isome 98.7 1.3E-08 4.6E-13 85.4 6.1 66 62-169 34-101 (130)
170 2dj0_A Thioredoxin-related tra 98.7 1.6E-08 5.4E-13 86.5 6.4 70 62-173 25-102 (137)
171 3hz4_A Thioredoxin; NYSGXRC, P 98.7 2.2E-08 7.5E-13 86.2 7.3 67 63-172 24-92 (140)
172 1r26_A Thioredoxin; redox-acti 98.7 2.4E-08 8.3E-13 84.9 7.4 67 62-172 36-104 (125)
173 3h79_A Thioredoxin-like protei 98.7 3.7E-08 1.3E-12 82.9 8.2 72 62-170 32-105 (127)
174 2vim_A Thioredoxin, TRX; thior 98.7 3.5E-08 1.2E-12 78.9 7.3 69 61-173 17-87 (104)
175 2xc2_A Thioredoxinn; oxidoredu 98.7 2.2E-08 7.5E-13 82.8 6.2 68 60-172 30-99 (117)
176 2i1u_A Thioredoxin, TRX, MPT46 98.7 4.7E-08 1.6E-12 80.7 8.1 68 62-172 29-98 (121)
177 3apq_A DNAJ homolog subfamily 98.7 1.5E-08 5E-13 93.3 5.1 69 61-172 112-182 (210)
178 3q6o_A Sulfhydryl oxidase 1; p 98.6 7.6E-08 2.6E-12 90.3 9.7 68 63-167 30-99 (244)
179 2vm1_A Thioredoxin, thioredoxi 98.6 4.6E-08 1.6E-12 80.2 7.1 67 62-172 27-95 (118)
180 2ywm_A Glutaredoxin-like prote 98.6 3.9E-07 1.4E-11 84.1 14.3 151 61-266 19-179 (229)
181 1wou_A Thioredoxin -related pr 98.6 5.6E-08 1.9E-12 81.9 7.7 76 62-172 23-107 (123)
182 3dxb_A Thioredoxin N-terminall 98.6 2.9E-08 9.9E-13 92.3 6.3 68 62-172 29-98 (222)
183 1v98_A Thioredoxin; oxidoreduc 98.6 9.1E-08 3.1E-12 81.9 8.9 75 55-172 42-118 (140)
184 1ti3_A Thioredoxin H, PTTRXH1; 98.6 4.5E-08 1.5E-12 79.6 6.7 69 61-173 24-94 (113)
185 2dbc_A PDCL2, unnamed protein 98.6 4.1E-08 1.4E-12 84.5 5.8 88 62-200 29-118 (135)
186 2j23_A Thioredoxin; immune pro 98.6 4.1E-08 1.4E-12 82.2 5.7 70 62-173 32-103 (121)
187 3ed3_A Protein disulfide-isome 98.6 2.9E-07 1E-11 90.0 12.5 67 62-168 34-102 (298)
188 2djj_A PDI, protein disulfide- 98.6 7E-08 2.4E-12 79.7 6.8 70 61-170 23-94 (121)
189 2av4_A Thioredoxin-like protei 98.6 1.1E-07 3.6E-12 86.0 8.1 67 62-171 40-108 (160)
190 1a8l_A Protein disulfide oxido 98.6 1.9E-07 6.5E-12 85.7 9.9 72 62-172 133-206 (226)
191 2qsi_A Putative hydrogenase ex 98.5 1.1E-07 3.6E-12 84.0 7.1 70 62-174 31-105 (137)
192 3t58_A Sulfhydryl oxidase 1; o 98.5 1.7E-07 5.9E-12 98.9 9.3 72 63-171 30-106 (519)
193 3idv_A Protein disulfide-isome 98.5 1.8E-07 6.3E-12 86.2 8.2 71 62-172 146-218 (241)
194 1mek_A Protein disulfide isome 98.5 2.5E-08 8.4E-13 81.5 1.5 70 62-171 23-94 (120)
195 1oaz_A Thioredoxin 1; immune s 98.5 3.3E-08 1.1E-12 83.7 1.7 68 62-172 20-103 (123)
196 1nho_A Probable thioredoxin; b 98.4 8.5E-08 2.9E-12 74.2 3.2 61 65-170 3-65 (85)
197 1fo5_A Thioredoxin; disulfide 98.4 1.1E-07 3.7E-12 73.6 3.6 62 64-170 3-66 (85)
198 3uem_A Protein disulfide-isome 98.4 1.1E-06 3.7E-11 86.7 11.3 151 63-263 135-310 (361)
199 1ilo_A Conserved hypothetical 98.4 4.9E-07 1.7E-11 68.9 6.3 60 66-173 2-63 (77)
200 1a0r_P Phosducin, MEKA, PP33; 98.4 3.2E-07 1.1E-11 88.1 6.4 90 62-200 132-223 (245)
201 2yj7_A LPBCA thioredoxin; oxid 97.7 4.3E-08 1.5E-12 78.1 0.0 68 62-172 18-87 (106)
202 2qgv_A Hydrogenase-1 operon pr 98.4 2.4E-07 8.3E-12 82.0 4.5 69 62-173 33-106 (140)
203 3iv4_A Putative oxidoreductase 98.3 2E-06 6.9E-11 73.3 9.5 70 63-173 24-96 (112)
204 3f8u_A Protein disulfide-isome 98.3 6.8E-07 2.3E-11 91.7 7.7 67 62-169 369-437 (481)
205 2hls_A Protein disulfide oxido 98.3 1.4E-06 4.7E-11 82.6 8.6 71 60-171 135-207 (243)
206 3dml_A Putative uncharacterize 98.3 8.6E-08 2.9E-12 82.2 -0.4 74 61-173 16-91 (116)
207 3kp8_A Vkorc1/thioredoxin doma 98.3 2.8E-08 9.6E-13 82.9 -3.5 33 55-87 4-38 (106)
208 3apo_A DNAJ homolog subfamily 98.3 1.1E-05 3.7E-10 87.9 15.5 148 63-266 563-719 (780)
209 1xiy_A Peroxiredoxin, pfaop; a 98.2 1.6E-06 5.5E-11 79.5 7.5 101 54-174 33-151 (182)
210 1wmj_A Thioredoxin H-type; str 98.2 5.3E-08 1.8E-12 81.3 -2.3 67 62-172 35-103 (130)
211 3evi_A Phosducin-like protein 98.2 1.2E-06 4.1E-11 74.7 6.1 87 63-200 23-111 (118)
212 2trc_P Phosducin, MEKA, PP33; 98.2 6.2E-07 2.1E-11 84.1 4.4 90 62-200 119-210 (217)
213 2xhf_A Peroxiredoxin 5; oxidor 98.2 1.6E-06 5.5E-11 78.9 6.7 114 42-174 17-149 (171)
214 2es7_A Q8ZP25_salty, putative 98.2 8.6E-07 2.9E-11 77.7 4.6 67 63-173 34-106 (142)
215 2r2j_A Thioredoxin domain-cont 98.2 1.4E-05 4.9E-10 80.0 13.0 74 62-172 21-96 (382)
216 3qcp_A QSOX from trypanosoma b 98.1 1.8E-06 6.3E-11 90.1 6.2 69 63-169 42-116 (470)
217 2ywm_A Glutaredoxin-like prote 98.1 6.3E-06 2.1E-10 75.9 7.4 63 62-170 135-199 (229)
218 2dlx_A UBX domain-containing p 98.0 1.1E-05 3.8E-10 71.9 8.1 71 62-172 41-117 (153)
219 3ga4_A Dolichyl-diphosphooligo 98.0 1.8E-05 6.3E-10 72.5 9.6 72 62-170 36-116 (178)
220 3uem_A Protein disulfide-isome 98.0 8E-06 2.7E-10 80.5 7.7 64 62-167 266-331 (361)
221 3f8u_A Protein disulfide-isome 98.0 9E-06 3.1E-10 83.4 7.0 67 62-171 20-88 (481)
222 2e7p_A Glutaredoxin; thioredox 97.9 8.1E-06 2.8E-10 67.2 5.2 68 62-172 18-85 (116)
223 1eej_A Thiol:disulfide interch 97.9 3.1E-05 1.1E-09 71.7 9.3 95 58-170 81-192 (216)
224 2b5e_A Protein disulfide-isome 97.9 3.3E-05 1.1E-09 79.9 9.3 66 62-169 30-97 (504)
225 2b5e_A Protein disulfide-isome 97.8 1.5E-05 5E-10 82.5 6.2 67 62-170 375-443 (504)
226 3gyk_A 27KDA outer membrane pr 97.8 9.9E-05 3.4E-09 65.1 10.4 35 56-90 15-51 (175)
227 2hls_A Protein disulfide oxido 97.7 0.00069 2.4E-08 63.9 14.8 45 221-265 136-185 (243)
228 1sji_A Calsequestrin 2, calseq 97.6 5E-05 1.7E-09 75.0 5.9 71 62-171 27-102 (350)
229 3hd5_A Thiol:disulfide interch 97.5 0.00054 1.9E-08 61.6 10.7 42 61-109 23-66 (195)
230 2k8s_A Thioredoxin; dimer, str 97.5 7.8E-05 2.7E-09 57.8 3.9 62 67-172 4-67 (80)
231 1ego_A Glutaredoxin; electron 97.5 0.00025 8.4E-09 54.8 6.6 64 67-172 3-70 (85)
232 1t3b_A Thiol:disulfide interch 97.4 0.00085 2.9E-08 61.9 11.0 90 62-169 85-191 (211)
233 1v58_A Thiol:disulfide interch 97.4 0.0013 4.3E-08 62.1 12.3 105 57-170 91-212 (241)
234 3us3_A Calsequestrin-1; calciu 97.3 0.00056 1.9E-08 68.3 8.8 73 62-172 29-105 (367)
235 2djk_A PDI, protein disulfide- 97.2 0.00031 1.1E-08 59.8 4.8 66 63-171 23-93 (133)
236 3h93_A Thiol:disulfide interch 97.2 0.0022 7.6E-08 57.3 10.3 40 62-108 24-65 (192)
237 2fgx_A Putative thioredoxin; N 97.1 0.00066 2.3E-08 57.0 6.1 35 65-108 30-66 (107)
238 2znm_A Thiol:disulfide interch 97.0 0.0017 5.8E-08 58.0 8.4 40 62-108 21-62 (195)
239 1ttz_A Conserved hypothetical 97.0 0.00054 1.9E-08 55.1 3.9 16 67-82 3-18 (87)
240 2rem_A Disulfide oxidoreductas 96.9 0.0029 9.9E-08 56.3 8.7 41 61-108 23-65 (193)
241 1o73_A Tryparedoxin; electron 96.9 0.0026 8.8E-08 53.4 7.8 56 220-275 25-83 (144)
242 1o8x_A Tryparedoxin, TRYX, TXN 96.9 0.0021 7.1E-08 54.4 7.1 56 220-275 25-83 (146)
243 1i5g_A Tryparedoxin II; electr 96.8 0.0022 7.5E-08 54.0 6.9 56 220-275 25-83 (144)
244 1hyu_A AHPF, alkyl hydroperoxi 96.8 0.0015 5E-08 68.3 7.0 67 61-173 115-183 (521)
245 1wjk_A C330018D20RIK protein; 96.7 0.002 7E-08 52.4 5.2 38 62-108 14-51 (100)
246 3s9f_A Tryparedoxin; thioredox 96.6 0.0032 1.1E-07 55.2 6.8 56 220-275 45-103 (165)
247 4fo5_A Thioredoxin-like protei 96.4 0.0062 2.1E-07 51.2 6.6 56 220-275 29-86 (143)
248 1h75_A Glutaredoxin-like prote 96.3 0.025 8.7E-07 42.9 9.0 16 67-82 3-18 (81)
249 2lrn_A Thiol:disulfide interch 96.0 0.017 5.9E-07 49.0 7.6 56 220-275 26-83 (152)
250 2hze_A Glutaredoxin-1; thiored 96.0 0.0086 2.9E-07 49.5 5.4 24 146-172 64-87 (114)
251 3eur_A Uncharacterized protein 96.0 0.017 5.9E-07 48.4 7.4 58 220-277 28-90 (142)
252 1kte_A Thioltransferase; redox 95.8 0.0042 1.4E-07 50.0 2.8 23 147-172 58-80 (105)
253 3die_A Thioredoxin, TRX; elect 95.8 0.02 6.7E-07 45.0 6.6 49 222-270 18-67 (106)
254 1zzo_A RV1677; thioredoxin fol 95.8 0.021 7.1E-07 46.5 7.0 56 220-276 22-78 (136)
255 3gl3_A Putative thiol:disulfid 95.8 0.018 6.2E-07 48.4 6.8 57 220-276 25-83 (152)
256 3fkf_A Thiol-disulfide oxidore 95.8 0.015 5.2E-07 48.3 6.2 56 220-275 30-88 (148)
257 3c1r_A Glutaredoxin-1; oxidize 95.8 0.014 5E-07 48.8 6.0 66 68-171 28-93 (118)
258 3gv1_A Disulfide interchange p 95.7 0.019 6.5E-07 50.4 6.7 94 60-170 11-120 (147)
259 3hcz_A Possible thiol-disulfid 95.7 0.014 4.9E-07 48.5 5.5 58 220-277 28-87 (148)
260 2ht9_A Glutaredoxin-2; thiored 95.6 0.032 1.1E-06 48.7 7.9 23 147-172 92-114 (146)
261 4evm_A Thioredoxin family prot 95.6 0.037 1.3E-06 44.7 7.7 56 220-275 19-80 (138)
262 3or5_A Thiol:disulfide interch 95.6 0.033 1.1E-06 47.3 7.7 57 220-276 31-89 (165)
263 3ewl_A Uncharacterized conserv 95.5 0.025 8.6E-07 47.0 6.6 56 220-275 24-84 (142)
264 3fw2_A Thiol-disulfide oxidore 95.5 0.032 1.1E-06 47.1 7.4 57 220-276 30-91 (150)
265 3kp9_A Vkorc1/thioredoxin doma 95.5 0.0072 2.5E-07 59.3 3.6 34 55-90 189-222 (291)
266 1lu4_A Soluble secreted antige 95.5 0.03 1E-06 45.7 6.9 55 220-275 21-76 (136)
267 3erw_A Sporulation thiol-disul 95.4 0.029 9.8E-07 46.3 6.5 53 222-274 33-90 (145)
268 1z6m_A Conserved hypothetical 95.4 0.057 2E-06 47.2 8.7 49 55-108 19-69 (175)
269 2lja_A Putative thiol-disulfid 95.4 0.032 1.1E-06 46.8 6.8 56 220-275 27-84 (152)
270 1dby_A Chloroplast thioredoxin 95.4 0.032 1.1E-06 44.0 6.3 47 221-267 17-64 (107)
271 1nsw_A Thioredoxin, TRX; therm 95.4 0.033 1.1E-06 43.8 6.4 48 220-267 14-62 (105)
272 3raz_A Thioredoxin-related pro 95.3 0.032 1.1E-06 47.2 6.7 54 220-274 21-76 (151)
273 2lrt_A Uncharacterized protein 95.3 0.027 9.2E-07 48.2 6.3 54 221-274 33-88 (152)
274 1jfu_A Thiol:disulfide interch 95.3 0.038 1.3E-06 48.4 7.3 57 220-276 57-116 (186)
275 2cq9_A GLRX2 protein, glutared 95.3 0.039 1.3E-06 46.9 7.1 23 147-172 70-92 (130)
276 2lus_A Thioredoxion; CR-Trp16, 94.3 0.003 1E-07 52.7 0.0 55 221-275 23-82 (143)
277 1thx_A Thioredoxin, thioredoxi 95.3 0.034 1.2E-06 44.3 6.4 47 221-267 23-70 (115)
278 1xwb_A Thioredoxin; dimerizati 95.3 0.041 1.4E-06 43.1 6.8 46 222-267 19-65 (106)
279 2trx_A Thioredoxin; electron t 95.3 0.039 1.3E-06 43.6 6.6 46 221-266 18-64 (108)
280 3ha9_A Uncharacterized thiored 95.3 0.051 1.7E-06 46.5 7.8 56 220-276 34-108 (165)
281 1t00_A Thioredoxin, TRX; redox 95.3 0.035 1.2E-06 44.3 6.3 47 221-267 21-68 (112)
282 1r7h_A NRDH-redoxin; thioredox 95.3 0.06 2E-06 39.9 7.2 16 67-82 3-18 (75)
283 3tco_A Thioredoxin (TRXA-1); d 95.3 0.038 1.3E-06 43.4 6.5 51 220-270 18-69 (109)
284 2qc7_A ERP31, ERP28, endoplasm 95.2 0.045 1.6E-06 51.9 8.0 68 62-169 21-94 (240)
285 2i4a_A Thioredoxin; acidophIle 95.2 0.04 1.4E-06 43.2 6.4 47 221-267 18-65 (107)
286 2f9s_A Thiol-disulfide oxidore 95.2 0.038 1.3E-06 46.5 6.7 56 220-275 23-80 (151)
287 3hxs_A Thioredoxin, TRXP; elec 95.2 0.035 1.2E-06 46.4 6.4 49 221-269 49-98 (141)
288 3ul3_B Thioredoxin, thioredoxi 95.2 0.028 9.6E-07 46.6 5.7 47 220-266 39-86 (128)
289 2yzu_A Thioredoxin; redox prot 95.1 0.042 1.4E-06 43.1 6.4 47 221-267 16-63 (109)
290 1fb6_A Thioredoxin M; electron 95.1 0.042 1.5E-06 42.9 6.3 46 222-267 17-63 (105)
291 1w4v_A Thioredoxin, mitochondr 95.1 0.04 1.4E-06 45.0 6.3 47 221-267 29-76 (119)
292 3gnj_A Thioredoxin domain prot 95.1 0.043 1.5E-06 43.4 6.3 47 221-267 20-67 (111)
293 2c0g_A ERP29 homolog, windbeut 95.0 0.055 1.9E-06 51.6 8.0 71 62-170 32-106 (248)
294 2voc_A Thioredoxin; electron t 95.0 0.035 1.2E-06 44.8 5.7 45 222-266 16-61 (112)
295 2b1k_A Thiol:disulfide interch 95.0 0.03 1E-06 48.2 5.6 52 221-275 49-101 (168)
296 2i1u_A Thioredoxin, TRX, MPT46 95.0 0.045 1.5E-06 44.2 6.3 47 221-267 28-75 (121)
297 1z6n_A Hypothetical protein PA 95.0 0.022 7.5E-07 50.9 4.8 52 221-273 52-104 (167)
298 3kcm_A Thioredoxin family prot 95.0 0.072 2.5E-06 44.7 7.8 57 220-276 25-84 (154)
299 3ic4_A Glutaredoxin (GRX-1); s 94.9 0.078 2.7E-06 41.3 7.2 21 148-171 58-78 (92)
300 2yan_A Glutaredoxin-3; oxidore 94.8 0.061 2.1E-06 43.6 6.7 22 148-172 63-84 (105)
301 3kij_A Probable glutathione pe 94.8 0.071 2.4E-06 46.8 7.6 56 220-275 35-99 (180)
302 3kh7_A Thiol:disulfide interch 94.8 0.049 1.7E-06 47.9 6.4 55 219-276 54-109 (176)
303 2b5x_A YKUV protein, TRXY; thi 94.8 0.051 1.7E-06 44.9 6.2 55 220-274 26-86 (148)
304 3eyt_A Uncharacterized protein 94.7 0.06 2E-06 45.5 6.6 56 220-275 25-89 (158)
305 2l57_A Uncharacterized protein 94.7 0.039 1.3E-06 45.3 5.2 42 220-261 23-65 (126)
306 1ti3_A Thioredoxin H, PTTRXH1; 94.7 0.077 2.6E-06 42.1 6.8 48 221-269 24-72 (113)
307 2e0q_A Thioredoxin; electron t 94.6 0.072 2.5E-06 41.2 6.4 46 221-267 14-60 (104)
308 2l5l_A Thioredoxin; structural 94.6 0.061 2.1E-06 45.1 6.3 46 221-266 36-82 (136)
309 2o8v_B Thioredoxin 1; disulfid 94.6 0.051 1.7E-06 45.4 5.7 46 221-266 38-84 (128)
310 3f3q_A Thioredoxin-1; His TAG, 94.5 0.068 2.3E-06 43.0 6.3 46 220-266 21-67 (109)
311 3m9j_A Thioredoxin; oxidoreduc 94.5 0.068 2.3E-06 41.8 6.1 45 222-267 19-64 (105)
312 2klx_A Glutaredoxin; thioredox 94.5 0.1 3.6E-06 40.5 7.0 16 67-82 8-23 (89)
313 3hz4_A Thioredoxin; NYSGXRC, P 94.4 0.065 2.2E-06 45.2 6.1 48 221-268 22-70 (140)
314 1ep7_A Thioredoxin CH1, H-type 94.4 0.072 2.5E-06 42.3 6.1 45 223-267 24-69 (112)
315 3hz8_A Thiol:disulfide interch 94.4 0.033 1.1E-06 50.2 4.5 41 62-109 23-65 (193)
316 1fov_A Glutaredoxin 3, GRX3; a 94.4 0.089 3.1E-06 39.7 6.3 16 67-82 3-18 (82)
317 4euy_A Uncharacterized protein 94.4 0.058 2E-06 42.8 5.4 46 220-266 15-61 (105)
318 3aps_A DNAJ homolog subfamily 94.4 0.073 2.5E-06 43.1 6.1 47 221-267 19-66 (122)
319 1kng_A Thiol:disulfide interch 94.3 0.048 1.6E-06 45.8 5.1 55 220-276 39-94 (156)
320 1xfl_A Thioredoxin H1; AT3G510 94.3 0.091 3.1E-06 43.5 6.8 46 221-267 36-82 (124)
321 2vim_A Thioredoxin, TRX; thior 94.3 0.082 2.8E-06 41.1 6.1 44 222-266 18-62 (104)
322 1un2_A DSBA, thiol-disulfide i 94.2 0.012 4.1E-07 53.9 1.2 44 61-108 111-156 (197)
323 2ggt_A SCO1 protein homolog, m 94.2 0.069 2.4E-06 45.3 5.9 55 220-274 20-84 (164)
324 3lwa_A Secreted thiol-disulfid 94.1 0.057 1.9E-06 47.3 5.3 57 220-276 56-121 (183)
325 1x5d_A Protein disulfide-isome 94.1 0.07 2.4E-06 43.7 5.5 45 221-265 23-72 (133)
326 2h30_A Thioredoxin, peptide me 94.1 0.085 2.9E-06 44.8 6.2 44 220-263 35-80 (164)
327 2p5q_A Glutathione peroxidase 94.0 0.1 3.6E-06 44.5 6.7 55 220-274 29-92 (170)
328 2vlu_A Thioredoxin, thioredoxi 94.0 0.093 3.2E-06 42.5 6.1 45 222-267 33-78 (122)
329 3dwv_A Glutathione peroxidase- 94.0 0.049 1.7E-06 48.4 4.7 55 220-274 43-106 (187)
330 3p2a_A Thioredoxin 2, putative 94.0 0.092 3.2E-06 44.4 6.3 50 220-269 52-102 (148)
331 3qfa_C Thioredoxin; protein-pr 94.0 0.072 2.5E-06 43.4 5.4 45 222-267 30-75 (116)
332 3fk8_A Disulphide isomerase; A 94.0 0.03 1E-06 46.5 3.1 43 221-263 27-72 (133)
333 2p31_A CL683, glutathione pero 94.0 0.1 3.5E-06 45.9 6.8 56 220-275 46-110 (181)
334 1gh2_A Thioredoxin-like protei 94.0 0.1 3.5E-06 41.3 6.1 46 221-267 19-65 (107)
335 3rhb_A ATGRXC5, glutaredoxin-C 94.0 0.11 3.6E-06 42.5 6.3 22 148-172 64-85 (113)
336 1syr_A Thioredoxin; SGPP, stru 94.0 0.11 3.8E-06 41.7 6.3 46 220-266 23-69 (112)
337 1zma_A Bacterocin transport ac 93.9 0.084 2.9E-06 42.8 5.7 43 220-264 26-69 (118)
338 2f51_A Thioredoxin; electron t 93.9 0.099 3.4E-06 42.8 6.1 44 222-266 22-66 (118)
339 3lor_A Thiol-disulfide isomera 93.8 0.11 3.9E-06 43.8 6.5 57 220-276 27-92 (160)
340 2vup_A Glutathione peroxidase- 93.8 0.11 3.8E-06 46.1 6.6 54 220-273 45-107 (190)
341 2dml_A Protein disulfide-isome 93.7 0.096 3.3E-06 42.9 5.6 47 221-267 33-80 (130)
342 2rli_A SCO2 protein homolog, m 93.6 0.13 4.3E-06 44.1 6.5 55 220-274 23-87 (171)
343 2oe3_A Thioredoxin-3; electron 93.6 0.12 4.1E-06 42.1 6.1 47 220-267 27-74 (114)
344 1qgv_A Spliceosomal protein U5 93.6 0.091 3.1E-06 44.9 5.5 44 222-265 22-66 (142)
345 2vm1_A Thioredoxin, thioredoxi 93.6 0.12 4.2E-06 41.2 6.0 45 222-267 27-72 (118)
346 3qmx_A Glutaredoxin A, glutare 93.3 0.35 1.2E-05 39.1 8.3 15 68-82 19-33 (99)
347 3d6i_A Monothiol glutaredoxin- 93.3 0.11 3.8E-06 41.4 5.3 45 222-266 20-66 (112)
348 1nho_A Probable thioredoxin; b 93.3 0.099 3.4E-06 39.3 4.7 40 227-266 5-45 (85)
349 2dj1_A Protein disulfide-isome 93.3 0.099 3.4E-06 43.4 5.1 46 220-265 31-80 (140)
350 2khp_A Glutaredoxin; thioredox 93.1 0.17 5.8E-06 39.3 6.0 16 67-82 8-23 (92)
351 2ppt_A Thioredoxin-2; thiredox 93.1 0.14 4.8E-06 44.3 6.0 47 221-267 62-109 (155)
352 3gix_A Thioredoxin-like protei 93.1 0.15 5E-06 44.0 6.0 45 221-265 21-66 (149)
353 2xc2_A Thioredoxinn; oxidoredu 93.1 0.13 4.5E-06 41.4 5.4 43 222-266 32-75 (117)
354 3hdc_A Thioredoxin family prot 92.9 0.22 7.5E-06 42.3 6.9 45 220-264 38-84 (158)
355 2j23_A Thioredoxin; immune pro 92.9 0.075 2.6E-06 43.6 3.7 48 220-267 30-79 (121)
356 1fo5_A Thioredoxin; disulfide 92.8 0.095 3.3E-06 39.4 4.0 41 226-266 5-46 (85)
357 2djj_A PDI, protein disulfide- 92.8 0.14 4.7E-06 41.3 5.2 44 221-264 23-72 (121)
358 2obi_A PHGPX, GPX-4, phospholi 92.8 0.21 7.3E-06 43.7 6.8 55 220-274 44-107 (183)
359 2dj3_A Protein disulfide-isome 92.8 0.13 4.5E-06 42.2 5.1 43 222-264 24-69 (133)
360 2k6v_A Putative cytochrome C o 92.7 0.27 9.3E-06 41.9 7.2 56 220-275 32-96 (172)
361 3ctg_A Glutaredoxin-2; reduced 92.7 0.18 6.1E-06 42.9 6.0 22 147-171 84-105 (129)
362 2ls5_A Uncharacterized protein 91.9 0.021 7E-07 48.8 0.0 54 221-274 31-88 (159)
363 2cvb_A Probable thiol-disulfid 92.6 0.24 8.1E-06 43.4 6.9 55 220-274 30-92 (188)
364 3drn_A Peroxiredoxin, bacterio 92.6 0.16 5.6E-06 43.5 5.7 55 220-275 25-83 (161)
365 2pu9_C TRX-F, thioredoxin F-ty 92.5 0.24 8.3E-06 39.3 6.2 41 222-263 23-64 (111)
366 1r26_A Thioredoxin; redox-acti 92.5 0.19 6.5E-06 41.8 5.8 46 221-267 35-81 (125)
367 3d22_A TRXH4, thioredoxin H-ty 92.5 0.21 7E-06 41.5 6.0 46 221-267 44-90 (139)
368 3uvt_A Thioredoxin domain-cont 92.4 0.23 7.8E-06 39.0 5.9 45 223-267 21-69 (111)
369 3zzx_A Thioredoxin; oxidoreduc 92.4 0.31 1.1E-05 39.6 6.8 43 222-265 19-62 (105)
370 1xzo_A BSSCO, hypothetical pro 92.3 0.18 6.3E-06 43.2 5.6 54 221-274 31-92 (174)
371 3cmi_A Peroxiredoxin HYR1; thi 92.3 0.16 5.3E-06 44.1 5.1 43 220-263 29-73 (171)
372 2l5o_A Putative thioredoxin; s 92.2 0.27 9.3E-06 41.0 6.5 53 221-273 26-81 (153)
373 3u5r_E Uncharacterized protein 92.2 0.22 7.6E-06 45.4 6.4 56 220-275 55-120 (218)
374 2lqo_A Putative glutaredoxin R 92.1 0.59 2E-05 37.6 8.0 15 68-82 7-21 (92)
375 2dj0_A Thioredoxin-related tra 92.0 0.18 6.1E-06 42.1 5.0 46 222-267 25-72 (137)
376 2v1m_A Glutathione peroxidase; 92.0 0.31 1.1E-05 41.4 6.6 45 220-264 28-74 (169)
377 3ia1_A THIO-disulfide isomeras 91.9 0.28 9.6E-06 41.1 6.3 50 224-275 31-83 (154)
378 2l6c_A Thioredoxin; oxidoreduc 91.9 0.2 6.9E-06 40.2 5.0 45 220-265 16-61 (110)
379 1v98_A Thioredoxin; oxidoreduc 91.8 0.37 1.2E-05 40.2 6.8 45 222-267 50-95 (140)
380 3dxb_A Thioredoxin N-terminall 91.7 0.24 8.3E-06 45.2 6.0 47 221-267 28-75 (222)
381 1x5e_A Thioredoxin domain cont 91.7 0.28 9.5E-06 40.0 5.8 47 220-267 20-68 (126)
382 3hd5_A Thiol:disulfide interch 91.7 1.1 3.9E-05 39.5 10.3 44 221-264 23-67 (195)
383 2fwh_A Thiol:disulfide interch 91.5 0.29 1E-05 40.7 5.8 43 222-265 30-76 (134)
384 3nzn_A Glutaredoxin; structura 91.4 0.22 7.4E-06 40.1 4.8 16 67-82 24-39 (103)
385 1faa_A Thioredoxin F; electron 91.4 0.35 1.2E-05 39.2 6.1 41 222-263 36-77 (124)
386 3tdg_A DSBG, putative uncharac 91.3 0.4 1.4E-05 46.5 7.2 40 61-109 145-186 (273)
387 1wmj_A Thioredoxin H-type; str 91.2 0.12 4E-06 42.2 3.0 46 221-267 34-80 (130)
388 1xvw_A Hypothetical protein RV 91.2 0.43 1.5E-05 40.4 6.7 55 220-275 32-90 (160)
389 3msz_A Glutaredoxin 1; alpha-b 91.2 0.41 1.4E-05 36.5 5.9 33 67-108 6-38 (89)
390 2bmx_A Alkyl hydroperoxidase C 91.2 0.26 8.9E-06 43.8 5.4 56 220-276 42-100 (195)
391 3l9v_A Putative thiol-disulfid 91.1 0.14 4.8E-06 45.9 3.6 43 62-108 13-57 (189)
392 1zof_A Alkyl hydroperoxide-red 91.0 0.21 7.1E-06 44.5 4.7 56 222-278 32-90 (198)
393 2gs3_A PHGPX, GPX-4, phospholi 90.9 0.47 1.6E-05 41.7 6.8 54 220-273 46-108 (185)
394 3gkn_A Bacterioferritin comigr 90.8 0.45 1.5E-05 40.4 6.4 55 220-275 32-89 (163)
395 2wz9_A Glutaredoxin-3; protein 90.8 0.39 1.3E-05 41.0 6.1 45 222-267 31-76 (153)
396 2lst_A Thioredoxin; structural 90.2 0.045 1.6E-06 45.0 0.0 45 219-263 15-63 (130)
397 4hde_A SCO1/SENC family lipopr 90.6 0.41 1.4E-05 42.0 6.2 57 220-276 29-93 (170)
398 2yj7_A LPBCA thioredoxin; oxid 89.9 0.05 1.7E-06 42.3 0.0 45 221-265 17-62 (106)
399 3qou_A Protein YBBN; thioredox 90.5 0.24 8.1E-06 46.5 4.7 49 222-270 25-74 (287)
400 2b7k_A SCO1 protein; metalloch 90.3 0.51 1.7E-05 42.3 6.6 56 220-275 38-102 (200)
401 3q6o_A Sulfhydryl oxidase 1; p 90.3 0.43 1.5E-05 43.9 6.3 44 221-264 28-75 (244)
402 3h79_A Thioredoxin-like protei 90.1 0.7 2.4E-05 37.7 6.8 45 222-266 32-82 (127)
403 2jsy_A Probable thiol peroxida 90.1 0.39 1.4E-05 41.1 5.5 51 221-273 42-94 (167)
404 3f9u_A Putative exported cytoc 90.0 0.21 7.2E-06 43.2 3.6 43 220-265 44-93 (172)
405 2ju5_A Thioredoxin disulfide i 90.0 0.12 4.2E-06 44.4 2.1 46 220-265 44-94 (154)
406 1mek_A Protein disulfide isome 90.0 0.22 7.6E-06 39.5 3.5 45 220-264 21-69 (120)
407 3ztl_A Thioredoxin peroxidase; 89.8 0.65 2.2E-05 42.5 7.0 56 220-276 66-124 (222)
408 1wou_A Thioredoxin -related pr 89.8 0.55 1.9E-05 38.5 5.9 42 222-263 23-72 (123)
409 3apq_A DNAJ homolog subfamily 89.7 0.49 1.7E-05 42.6 6.0 48 220-267 111-159 (210)
410 3h8q_A Thioredoxin reductase 3 89.7 0.79 2.7E-05 37.6 6.8 22 148-172 61-82 (114)
411 3cxg_A Putative thioredoxin; m 89.6 0.27 9.4E-06 41.1 4.0 42 221-264 38-80 (133)
412 2dbc_A PDCL2, unnamed protein 89.5 0.46 1.6E-05 39.8 5.3 42 222-264 29-71 (135)
413 1qmv_A Human thioredoxin perox 89.5 0.76 2.6E-05 40.8 7.0 55 221-276 32-89 (197)
414 2i81_A 2-Cys peroxiredoxin; st 89.3 0.49 1.7E-05 43.2 5.7 54 222-276 51-107 (213)
415 2ywi_A Hypothetical conserved 89.2 0.45 1.5E-05 41.7 5.3 54 221-274 43-106 (196)
416 2f8a_A Glutathione peroxidase 89.1 0.57 2E-05 42.6 6.0 55 220-274 44-107 (208)
417 1uul_A Tryparedoxin peroxidase 89.1 0.68 2.3E-05 41.4 6.4 56 220-276 33-91 (202)
418 2h01_A 2-Cys peroxiredoxin; th 88.9 0.4 1.4E-05 42.4 4.7 54 222-276 30-86 (192)
419 1we0_A Alkyl hydroperoxide red 88.8 0.43 1.5E-05 41.9 4.8 54 220-274 28-84 (187)
420 1sen_A Thioredoxin-like protei 88.6 0.083 2.8E-06 46.2 -0.0 46 220-265 43-89 (164)
421 2ec4_A FAS-associated factor 1 88.6 2.6 9E-05 37.9 10.0 100 45-168 33-141 (178)
422 3me7_A Putative uncharacterize 88.5 0.69 2.3E-05 40.3 5.9 55 220-274 25-86 (170)
423 1wik_A Thioredoxin-like protei 88.4 1 3.5E-05 36.6 6.5 20 63-82 14-37 (109)
424 3feu_A Putative lipoprotein; a 88.1 0.32 1.1E-05 43.5 3.5 37 63-108 22-60 (185)
425 2pn8_A Peroxiredoxin-4; thiore 87.9 1 3.6E-05 40.9 7.0 56 220-276 45-103 (211)
426 2yzh_A Probable thiol peroxida 87.9 0.97 3.3E-05 39.0 6.4 54 220-275 44-99 (171)
427 1oaz_A Thioredoxin 1; immune s 87.8 0.21 7.1E-06 41.4 1.9 45 221-265 19-78 (123)
428 2k8s_A Thioredoxin; dimer, str 87.8 0.49 1.7E-05 35.8 4.0 38 226-263 4-41 (80)
429 2av4_A Thioredoxin-like protei 87.4 0.82 2.8E-05 41.0 5.7 43 222-264 40-83 (160)
430 2hyx_A Protein DIPZ; thioredox 87.1 0.75 2.6E-05 45.8 5.9 56 220-275 79-141 (352)
431 3ixr_A Bacterioferritin comigr 87.1 1.3 4.6E-05 38.7 7.0 54 220-274 48-104 (179)
432 1zye_A Thioredoxin-dependent p 86.8 0.85 2.9E-05 41.7 5.6 55 221-276 54-111 (220)
433 2c0d_A Thioredoxin peroxidase 86.4 0.79 2.7E-05 42.2 5.2 54 222-276 55-111 (221)
434 3zrd_A Thiol peroxidase; oxido 85.8 1.2 4.2E-05 40.0 6.1 53 220-274 75-129 (200)
435 1psq_A Probable thiol peroxida 85.8 1.7 5.7E-05 37.2 6.7 54 220-275 39-94 (163)
436 3emx_A Thioredoxin; structural 85.7 0.44 1.5E-05 39.8 2.8 38 225-264 33-71 (135)
437 2kuc_A Putative disulphide-iso 85.4 0.61 2.1E-05 37.9 3.6 44 221-264 25-72 (130)
438 1ilo_A Conserved hypothetical 85.4 1.5 5E-05 32.1 5.4 35 226-261 4-38 (77)
439 3h93_A Thiol:disulfide interch 84.6 4.4 0.00015 35.5 9.1 97 222-328 24-121 (192)
440 3gyk_A 27KDA outer membrane pr 84.6 1.6 5.5E-05 37.6 6.1 55 207-263 8-64 (175)
441 3ed3_A Protein disulfide-isome 84.3 1.5 5.1E-05 42.2 6.3 44 221-264 33-77 (298)
442 1xvq_A Thiol peroxidase; thior 83.7 1.3 4.5E-05 38.5 5.2 51 221-274 42-94 (175)
443 1q98_A Thiol peroxidase, TPX; 83.6 2.1 7.2E-05 36.7 6.4 53 220-274 40-94 (165)
444 2rem_A Disulfide oxidoreductas 83.5 6.1 0.00021 34.4 9.5 41 222-262 24-65 (193)
445 2qsi_A Putative hydrogenase ex 83.4 1.5 5E-05 38.2 5.2 48 220-267 29-80 (137)
446 3p7x_A Probable thiol peroxida 83.2 1.7 5.8E-05 37.3 5.6 53 220-275 43-97 (166)
447 2a4v_A Peroxiredoxin DOT5; yea 83.1 1.9 6.6E-05 36.5 5.9 51 222-274 32-87 (159)
448 1un2_A DSBA, thiol-disulfide i 83.0 2.2 7.5E-05 38.6 6.5 52 210-261 100-157 (197)
449 1n8j_A AHPC, alkyl hydroperoxi 82.5 2.3 7.9E-05 37.5 6.4 54 221-275 28-84 (186)
450 2znm_A Thiol:disulfide interch 81.4 5.1 0.00017 35.0 8.2 41 222-262 21-62 (195)
451 3ira_A Conserved protein; meth 80.6 0.73 2.5E-05 41.4 2.3 44 220-263 36-83 (173)
452 3l9s_A Thiol:disulfide interch 80.6 1 3.5E-05 40.5 3.3 41 61-108 19-64 (191)
453 1aba_A Glutaredoxin; electron 79.5 7.9 0.00027 29.6 7.8 14 69-82 4-21 (87)
454 3t58_A Sulfhydryl oxidase 1; o 78.8 2.2 7.4E-05 44.7 5.6 44 221-264 28-75 (519)
455 2e7p_A Glutaredoxin; thioredox 78.4 3.9 0.00013 32.4 5.9 40 222-265 18-57 (116)
456 3ga4_A Dolichyl-diphosphooligo 76.7 4 0.00014 36.8 6.0 49 223-271 37-98 (178)
457 3hz8_A Thiol:disulfide interch 76.6 18 0.00061 31.9 10.3 42 222-263 23-65 (193)
458 1t1v_A SH3BGRL3, SH3 domain-bi 76.2 11 0.00037 29.2 7.8 13 69-81 6-18 (93)
459 2djk_A PDI, protein disulfide- 75.9 4.1 0.00014 33.7 5.6 42 222-263 22-63 (133)
460 3msz_A Glutaredoxin 1; alpha-b 75.7 2.9 9.8E-05 31.5 4.2 37 225-265 5-41 (89)
461 2dlx_A UBX domain-containing p 75.2 1.9 6.4E-05 37.8 3.3 44 220-263 39-86 (153)
462 2wfc_A Peroxiredoxin 5, PRDX5; 75.1 4.3 0.00015 35.3 5.7 53 222-275 30-87 (167)
463 3c7m_A Thiol:disulfide interch 75.1 24 0.00083 30.3 10.6 37 225-261 20-57 (195)
464 3qpm_A Peroxiredoxin; oxidored 75.1 5.2 0.00018 37.1 6.5 56 220-276 74-132 (240)
465 3ph9_A Anterior gradient prote 74.8 2.1 7.3E-05 37.3 3.5 42 220-261 41-86 (151)
466 1z6m_A Conserved hypothetical 74.0 6.2 0.00021 33.8 6.4 41 222-262 26-69 (175)
467 2i3y_A Epididymal secretory gl 72.9 5.6 0.00019 36.4 6.1 54 220-274 53-115 (215)
468 3l4n_A Monothiol glutaredoxin- 72.9 2.9 9.9E-05 35.5 3.8 58 67-163 16-76 (127)
469 2fgx_A Putative thioredoxin; N 72.8 5.2 0.00018 33.0 5.3 40 224-263 30-69 (107)
470 1tp9_A Peroxiredoxin, PRX D (t 72.4 5 0.00017 34.3 5.3 54 221-275 33-91 (162)
471 3c7m_A Thiol:disulfide interch 71.9 3.8 0.00013 35.6 4.5 40 62-108 16-58 (195)
472 3evi_A Phosducin-like protein 70.7 4.6 0.00016 33.5 4.5 40 223-263 23-63 (118)
473 4dvc_A Thiol:disulfide interch 69.9 25 0.00087 29.7 9.4 53 210-262 8-63 (184)
474 2v2g_A Peroxiredoxin 6; oxidor 69.6 6.2 0.00021 36.7 5.6 55 222-277 27-85 (233)
475 2trc_P Phosducin, MEKA, PP33; 68.8 5 0.00017 36.8 4.8 40 222-262 119-159 (217)
476 4f9z_D Endoplasmic reticulum r 68.5 15 0.0005 33.3 7.9 37 64-107 132-170 (227)
477 2r2j_A Thioredoxin domain-cont 68.4 7.7 0.00026 38.1 6.4 47 221-267 20-73 (382)
478 1prx_A HORF6; peroxiredoxin, h 68.2 10 0.00035 34.7 6.8 52 225-277 34-87 (224)
479 2lqo_A Putative glutaredoxin R 67.4 6.3 0.00021 31.4 4.5 35 225-263 5-39 (92)
480 3h8q_A Thioredoxin reductase 3 66.2 11 0.00037 30.6 5.9 49 224-276 17-65 (114)
481 3a2v_A Probable peroxiredoxin; 65.6 7.2 0.00025 36.8 5.2 54 222-276 32-88 (249)
482 4dvc_A Thiol:disulfide interch 65.3 6.1 0.00021 33.7 4.4 29 62-90 20-50 (184)
483 1ego_A Glutaredoxin; electron 65.2 8.9 0.0003 28.4 4.8 35 226-260 3-38 (85)
484 3tjj_A Peroxiredoxin-4; thiore 64.1 6.1 0.00021 37.1 4.5 56 220-276 88-146 (254)
485 3qcp_A QSOX from trypanosoma b 64.0 7.6 0.00026 40.3 5.5 50 222-271 41-99 (470)
486 2r37_A Glutathione peroxidase 63.4 10 0.00035 34.3 5.7 54 220-274 35-97 (207)
487 3mng_A Peroxiredoxin-5, mitoch 62.7 13 0.00043 32.7 6.0 55 221-276 41-100 (173)
488 2es7_A Q8ZP25_salty, putative 62.3 3.7 0.00013 35.0 2.4 42 222-264 33-79 (142)
489 3ctg_A Glutaredoxin-2; reduced 61.6 11 0.00038 31.5 5.2 46 226-274 39-87 (129)
490 1a0r_P Phosducin, MEKA, PP33; 61.2 10 0.00035 35.6 5.4 39 222-261 132-171 (245)
491 2ct6_A SH3 domain-binding glut 59.5 19 0.00066 29.1 6.2 56 67-136 10-74 (111)
492 3c1r_A Glutaredoxin-1; oxidize 59.3 13 0.00045 30.3 5.2 46 225-273 26-74 (118)
493 1fov_A Glutaredoxin 3, GRX3; a 59.2 13 0.00044 27.3 4.7 34 226-263 3-36 (82)
494 1xcc_A 1-Cys peroxiredoxin; un 59.0 14 0.00046 33.7 5.7 56 221-277 28-87 (220)
495 3uma_A Hypothetical peroxiredo 58.6 17 0.00057 32.2 6.1 53 221-274 54-111 (184)
496 3ic4_A Glutaredoxin (GRX-1); s 57.8 13 0.00045 28.2 4.7 38 224-265 12-49 (92)
497 1aba_A Glutaredoxin; electron 57.7 21 0.00072 27.0 5.8 33 226-262 2-38 (87)
498 2qgv_A Hydrogenase-1 operon pr 57.2 6.8 0.00023 34.0 3.1 45 220-264 31-79 (140)
499 1kte_A Thioltransferase; redox 57.1 17 0.00057 28.2 5.3 37 225-265 13-52 (105)
500 1nm3_A Protein HI0572; hybrid, 57.0 16 0.00054 33.1 5.8 54 221-275 31-89 (241)
No 1
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.86 E-value=3.2e-21 Score=172.41 Aligned_cols=127 Identities=17% Similarity=0.367 Sum_probs=108.1
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+...+| .+++++++||+|+|+|||+||++|+.++ |.++|+++++ ..+++||+|++ |.+.+.+.+
T Consensus 34 l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~-----~~~v~vv~v~~--------d~~~~~~~~ 99 (165)
T 3s9f_A 34 LRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHD-----SKNFEIILASW--------DEEEDDFNA 99 (165)
T ss_dssp EEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CCSHHHHHH
T ss_pred eecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhcc-----CCCeEEEEEec--------CCCHHHHHH
Confidence 455678 9999999999999999999999999999 9999999963 24799999995 445567888
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCC-CcEEccccchhhhhcC-CccCCCCc
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPH-GKVVCPNALHMMWIWG-SLAYPFST 191 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~-GkVv~~na~~~I~~~g-~~aFPft~ 191 (425)
+..+++|..+++.. ......+.+.|++.++|+++|||++ |+|+.+++...+.... .+.|||+.
T Consensus 100 ~~~~~~~~~~~~~~---~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 100 YYAKMPWLSIPFAN---RNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp HHTTCSSEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HHHhCCCcccccCc---hhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCCC
Confidence 88899998888743 2334688999999999999999998 9999999999998755 68899975
No 2
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.86 E-value=7.1e-21 Score=164.13 Aligned_cols=128 Identities=19% Similarity=0.358 Sum_probs=108.7
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ ..+++||+|++ |.+.+.+.+
T Consensus 13 l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~-----~~~~~vv~v~~--------d~~~~~~~~ 79 (144)
T 1i5g_A 13 VLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAE-----KKNFEVMLISW--------DESAEDFKD 79 (144)
T ss_dssp EEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CSSHHHHHH
T ss_pred EEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-----CCCEEEEEEeC--------CCCHHHHHH
Confidence 45578999999999999999999999999999999 9999999953 24799999995 345567778
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEEC-CCCcEEccccchhhhhcC-CccCCCCc
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLD-PHGKVVCPNALHMMWIWG-SLAYPFST 191 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD-~~GkVv~~na~~~I~~~g-~~aFPft~ 191 (425)
+..+++|..+|+.. ......+.+.|++.++|+++|+| ++|+|+..++...+...+ ...|||++
T Consensus 80 ~~~~~~~~~~~~~~---~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~~ 144 (144)
T 1i5g_A 80 YYAKMPWLALPFED---RKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPWPN 144 (144)
T ss_dssp HHTTCSSEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HHHhCCccccccCc---hHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCCCC
Confidence 88889998877642 12346788999999999999999 999999999999998877 57899964
No 3
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.85 E-value=1e-20 Score=163.81 Aligned_cols=128 Identities=20% Similarity=0.344 Sum_probs=108.1
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+...+| .+++++++||+|+|+|||+||++|+.++ |.++|+++++ ..+++|++|++ |.+.+.+.+
T Consensus 14 l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~-----~~~~~vv~v~~--------d~~~~~~~~ 79 (146)
T 1o8x_A 14 LRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHE-----SKNFEVVFCTW--------DEEEDGFAG 79 (146)
T ss_dssp EEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CCSHHHHHH
T ss_pred EEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhh-----cCCeEEEEEeC--------CCCHHHHHH
Confidence 445678 9999999999999999999999999999 9999999953 24799999995 445567888
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEEC-CCCcEEccccchhhhhcC-CccCCCCch
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLD-PHGKVVCPNALHMMWIWG-SLAYPFSTA 192 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD-~~GkVv~~na~~~I~~~g-~~aFPft~~ 192 (425)
+..+++|..+++.. ......+.+.|++.++|+++++| ++|+|+..++...+.+.+ ...|||++.
T Consensus 80 ~~~~~~~~~~~~~~---~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~~~ 145 (146)
T 1o8x_A 80 YFAKMPWLAVPFAQ---SEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWKDA 145 (146)
T ss_dssp HHTTCSSEECCGGG---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCCCC
T ss_pred HHHHCCceeeccch---hhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCCCC
Confidence 88889998877632 12346788999999999999999 999999999999998766 578999864
No 4
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.84 E-value=2.2e-20 Score=160.49 Aligned_cols=127 Identities=18% Similarity=0.322 Sum_probs=107.2
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+.+.+| .+++++++||+|+|+|||+||++|+.++ |.++|+++++ ..+++|++|++ |.+.+.+.+
T Consensus 14 l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~-----~~~~~vv~i~~--------d~~~~~~~~ 79 (144)
T 1o73_A 14 LLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHV-----AKNFEVVLISW--------DENESDFHD 79 (144)
T ss_dssp BBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CSSHHHHHH
T ss_pred eecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhcc-----CCCEEEEEEeC--------CCCHHHHHH
Confidence 455678 9999999999999999999999999999 9999999952 24799999995 344567788
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEEC-CCCcEEccccchhhhhcC-CccCCCCc
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLD-PHGKVVCPNALHMMWIWG-SLAYPFST 191 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD-~~GkVv~~na~~~I~~~g-~~aFPft~ 191 (425)
+..+++|..+++.. ......+.+.|++.++|+++++| ++|+++..++...+...+ ...|||++
T Consensus 80 ~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W~~ 144 (144)
T 1o73_A 80 YYGKMPWLALPFDQ---RSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPWPN 144 (144)
T ss_dssp HHTTCSSEECCTTC---HHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HHHhCCceEeeccc---hhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCCCC
Confidence 88889999888642 22345788999999999999999 899999999999998766 57899963
No 5
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.78 E-value=6.3e-19 Score=151.79 Aligned_cols=117 Identities=14% Similarity=0.137 Sum_probs=91.8
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHH---HHHHHHhhhccCCCceEEEEEeccCCCCC
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQ---LYSEARQHQTRHESQYEVVWLPIVDPNMP 114 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~---iY~~~k~~~~k~~~~fEIV~IsIvd~s~~ 114 (425)
+..+|. +...+|+.+++++++||+|+|+|||+||+||+.++ |.+ +|+++++ .+++||.|++
T Consensus 8 G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~------~~~~vi~i~~------ 75 (142)
T 3eur_A 8 GTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA------KKLKVLSIYP------ 75 (142)
T ss_dssp TSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT------TSEEEEEEEC------
T ss_pred CCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc------CCeEEEEEEc------
Confidence 344554 44578999999999999999999999999999999 999 9999964 3799999985
Q ss_pred CchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcccc
Q 014387 115 WTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNA 175 (425)
Q Consensus 115 w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na 175 (425)
|.+.+.+.++...++. +||.+.|......+.+.|++.++|+++|||++|+|+..++
T Consensus 76 --d~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 131 (142)
T 3eur_A 76 --DEELDEWKKHRNDFAK---EWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDA 131 (142)
T ss_dssp --SSCHHHHHHHGGGSCT---TSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEE
T ss_pred --CCCHHHHHHHHHhccc---ccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCC
Confidence 4445567666655441 3333446554446789999999999999999999997653
No 6
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.76 E-value=3.2e-18 Score=146.58 Aligned_cols=115 Identities=12% Similarity=0.109 Sum_probs=88.7
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHH---HHHHHHhhhccCCCceEEEEEeccCCCCC
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQ---LYSEARQHQTRHESQYEVVWLPIVDPNMP 114 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~---iY~~~k~~~~k~~~~fEIV~IsIvd~s~~ 114 (425)
++.+|. +...+|+.+++++++||+|+|+|||+||++|+.++ |.+ +|+++++ .+++||.|++
T Consensus 4 G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~------~~~~~v~v~~------ 71 (142)
T 3ewl_A 4 GMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN------GTLRVLAIYP------ 71 (142)
T ss_dssp TSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH------TSEEEEEEEC------
T ss_pred CCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc------CCeEEEEEEe------
Confidence 455564 44578999999999999999999999999999998 777 9999975 3699999995
Q ss_pred CchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 115 WTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 115 w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
|.+.+.+.++....+ ++||.+.|..+.....+.|++.++|++++||++|+|+..
T Consensus 72 --d~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 72 --DENREEWATKAVYMP---QGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp --SSCHHHHHHHHTTSC---TTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEEC
T ss_pred --cCCHHHHHHHHHHcC---CCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEec
Confidence 334455666655544 255556666543223459999999999999999999873
No 7
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.75 E-value=2.2e-18 Score=148.52 Aligned_cols=115 Identities=10% Similarity=0.123 Sum_probs=83.5
Q ss_pred CCCCCccc-CCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchH
Q 014387 42 DDLLPLVD-GATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDN 118 (425)
Q Consensus 42 ~~~~pl~d-g~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~ 118 (425)
++.+|.|. ..+|+.+++++++||+|+|+|||+||+||+.++ |.++|+++++ ++++||.|++ |.
T Consensus 10 G~~~P~f~l~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~------~~~~vv~vs~--------d~ 75 (143)
T 4fo5_A 10 GDLAPRIEFLGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGP------DKIAMCSISM--------DE 75 (143)
T ss_dssp TSBCCCCCC-----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCT------TTEEEEEEEC--------CS
T ss_pred cccCCceEEcCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCc------CCEEEEEEEc--------cC
Confidence 44455433 467899999999999999999999999999999 9999999853 3799999996 22
Q ss_pred HHHHHHHHH--hCCCc-eeeccCcccChHH-HHHHHHhCCCCCCCeEEEECCCCcEEcccc
Q 014387 119 KQKQFQSLQ--SAMPW-YTVYHPSLIDRAV-IQFIKEEWQFGKKPILVVLDPHGKVVCPNA 175 (425)
Q Consensus 119 ~~~~F~~~~--~~mPW-~aV~~p~l~D~~~-~~~L~~~f~v~~iPtlVvLD~~GkVv~~na 175 (425)
+.+.+.++. ..++| ..+. |..+ ...+.+.|++.++|+++|||++|+|+..+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-----d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 131 (143)
T 4fo5_A 76 KESIFTETVKIDKLDLSTQFH-----EGLGKESELYKKYDLRKGFKNFLINDEGVIIAANV 131 (143)
T ss_dssp CHHHHHHHHHHHTCCGGGEEE-----CTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEESC
T ss_pred CHHHHHHHHHHhCCCCceeee-----cccccchHHHHHcCCCCCCcEEEECCCCEEEEccC
Confidence 233444432 45666 3333 3211 246889999999999999999999997653
No 8
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.73 E-value=2.2e-17 Score=144.87 Aligned_cols=112 Identities=13% Similarity=0.243 Sum_probs=88.4
Q ss_pred CCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHH
Q 014387 44 LLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNK 119 (425)
Q Consensus 44 ~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~ 119 (425)
.+|. +.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ ++++||.|++ |..
T Consensus 14 ~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~------~~~~vv~i~~--------d~~ 79 (152)
T 2lrt_A 14 SIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYAS------QGFEIYQISL--------DGD 79 (152)
T ss_dssp CSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEC--------SCC
T ss_pred CCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhcc------CCeEEEEEEc--------cCC
Confidence 4554 44578999999999999999999999999999999 9999999964 2699999995 333
Q ss_pred HHHHHHHHhCCCceeeccCcccChHH-HHHHHHhCCCCCCCeEEEECCCCcEEccc
Q 014387 120 QKQFQSLQSAMPWYTVYHPSLIDRAV-IQFIKEEWQFGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 120 ~~~F~~~~~~mPW~aV~~p~l~D~~~-~~~L~~~f~v~~iPtlVvLD~~GkVv~~n 174 (425)
.+.+..+...+||..+. |..+ ...+.+.|++.++|+++|||++|+|+...
T Consensus 80 ~~~~~~~~~~~~~~~~~-----d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 80 EHFWKTSADNLPWVCVR-----DANGAYSSYISLYNVTNLPSVFLVNRNNELSARG 130 (152)
T ss_dssp HHHHHHHHTTCSSEEEE-----CSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEET
T ss_pred HHHHHHHHhCCCceEEE-----CCCCcchHHHHHcCcccCceEEEECCCCeEEEec
Confidence 34556666667765544 4322 12478899999999999999999998753
No 9
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=1.4e-17 Score=144.55 Aligned_cols=114 Identities=15% Similarity=0.301 Sum_probs=88.2
Q ss_pred CCCCCc--ccCCCCCeEecc--ccCCCEEEEEEecCCChH--hHHHH--HHHHHHHH-HhhhccCCCceEEEEEeccCCC
Q 014387 42 DDLLPL--VDGATKTRVNLE--VLRRKMVLLLISDLDISQ--EEVII--LEQLYSEA-RQHQTRHESQYEVVWLPIVDPN 112 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls--~LkGK~VlL~FsAsWC~p--Cr~~~--L~~iY~~~-k~~~~k~~~~fEIV~IsIvd~s 112 (425)
+.++|. +.+.+|+.++++ +++||+|+|+|||+||+| |+.++ |.++|+++ ++ ++++||.|++
T Consensus 8 G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~------~~~~~v~v~~---- 77 (150)
T 3fw2_A 8 GKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN------KYIGMLGISL---- 77 (150)
T ss_dssp TSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC------SSEEEEEEEC----
T ss_pred CCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC------CCeEEEEEEc----
Confidence 444553 455789999999 999999999999999999 99999 99999999 43 4699999996
Q ss_pred CCCchHHHHHHHHHH--hCCCceeeccCcccChH-HHHHHHHhCCCCCCCeEEEECCCCcEEccc
Q 014387 113 MPWTDNKQKQFQSLQ--SAMPWYTVYHPSLIDRA-VIQFIKEEWQFGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~--~~mPW~aV~~p~l~D~~-~~~~L~~~f~v~~iPtlVvLD~~GkVv~~n 174 (425)
|.+.+.+.++. ..++|..+. |.. ....+.+.|++.++|+++|||++|+|+...
T Consensus 78 ----d~~~~~~~~~~~~~~~~~~~~~-----d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 78 ----DVDKQQWKDAIKRDTLDWEQVC-----DFGGLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp ----CSCHHHHHHHHHHTTCCSEEEC-----CSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred ----CCCHHHHHHHHHHhCCCceEEE-----cCcccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 22334444443 355665443 331 134788999999999999999999999765
No 10
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.71 E-value=8.4e-18 Score=146.43 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=81.0
Q ss_pred CCCeEeccccCCCEEEEEEecCCChHhHHH-H--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHh
Q 014387 52 TKTRVNLEVLRRKMVLLLISDLDISQEEVI-I--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQS 128 (425)
Q Consensus 52 ~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~-~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~ 128 (425)
+|+.+++++++||+|+|+|||+||+||+.+ + |.++|+++++ ++++||.|++..... .+.+.+...++..
T Consensus 17 ~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~------~~v~~v~v~~~~~~~--~~~~~~~~~~~~~ 88 (158)
T 3eyt_A 17 SATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPE------DKVAVLGLHTVFEHH--EAMTPISLKAFLH 88 (158)
T ss_dssp CSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT------TTEEEEEEECCCSCG--GGSCHHHHHHHHH
T ss_pred CCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCc------CCEEEEEEEeccccc--ccCCHHHHHHHHH
Confidence 578999999999999999999999999996 7 9999999853 369999999621000 0123333444333
Q ss_pred CCCceeeccCcccChHHHH---HHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 129 AMPWYTVYHPSLIDRAVIQ---FIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 129 ~mPW~aV~~p~l~D~~~~~---~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
.. .++||.+.|..... .+.+.|++.++|+++|||++|+|+..
T Consensus 89 ~~---~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 89 EY---RIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp HT---TCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred Hc---CCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 22 22345444543311 58899999999999999999999864
No 11
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.71 E-value=4.3e-17 Score=141.83 Aligned_cols=114 Identities=17% Similarity=0.241 Sum_probs=86.8
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCch
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTD 117 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D 117 (425)
+.++|. +.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++++++++ .+++|+.|++ |
T Consensus 6 g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~--------d 71 (152)
T 2lrn_A 6 GSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKD------KGFTIYGVST--------D 71 (152)
T ss_dssp TEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTT------TTEEEEEEEC--------C
T ss_pred CCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcc------CCeEEEEEEc--------c
Confidence 334454 34567999999999999999999999999999999 9999999953 3699999996 2
Q ss_pred HHHHHHHHHH--hCCCceeeccCcccChHH-HHHHHHhCCCCCCCeEEEECCCCcEEccc
Q 014387 118 NKQKQFQSLQ--SAMPWYTVYHPSLIDRAV-IQFIKEEWQFGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 118 ~~~~~F~~~~--~~mPW~aV~~p~l~D~~~-~~~L~~~f~v~~iPtlVvLD~~GkVv~~n 174 (425)
.+.+.+.++. ..++|..+ .|... ...+.+.|++.++|+++|+|++|+++...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 72 RREEDWKKAIEEDKSYWNQV-----LLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp SCHHHHHHHHHHHTCCSEEE-----EECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC
T ss_pred CCHHHHHHHHHHhCCCCeEE-----ecccchhHHHHHHhCCCcCCeEEEECCCCeEEEee
Confidence 2223333332 34565443 34322 35788999999999999999999998764
No 12
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.51 E-value=2e-18 Score=147.44 Aligned_cols=117 Identities=15% Similarity=0.236 Sum_probs=91.3
Q ss_pred ccCCCCCeEeccc-cCCC-EEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHH
Q 014387 48 VDGATKTRVNLEV-LRRK-MVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQF 123 (425)
Q Consensus 48 ~dg~~g~~V~ls~-LkGK-~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F 123 (425)
+...+|+.+++++ ++|| +|+|+|||+|||+|+.++ |.++|+++++ .+.+++|++|++ |.+.+.+
T Consensus 9 l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~----~~~~~~v~~v~~--------d~~~~~~ 76 (143)
T 2lus_A 9 LVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVD----DSAPFEIIFVSS--------DRSEDDM 76 (143)
Confidence 3445688999999 9999 999999999999999999 9999999854 124799999985 3233344
Q ss_pred HHHHh--CCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccccchhhh
Q 014387 124 QSLQS--AMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNALHMMW 180 (425)
Q Consensus 124 ~~~~~--~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na~~~I~ 180 (425)
.++.. ..+|..+++. .| ....+.+.|++.++|+++++|++|+++..++...+.
T Consensus 77 ~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~ 131 (143)
T 2lus_A 77 FQYMMESHGDWLAIPYR--SG--PASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQ 131 (143)
Confidence 44333 4577766652 12 235788999999999999999999999999888765
No 13
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.68 E-value=2.1e-17 Score=143.96 Aligned_cols=121 Identities=15% Similarity=0.166 Sum_probs=84.7
Q ss_pred CCCCCcccC---CCCCeEeccccCCCEEEEEEecCCChHhHHH-H--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 42 DDLLPLVDG---ATKTRVNLEVLRRKMVLLLISDLDISQEEVI-I--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 42 ~~~~pl~dg---~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~-~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
+.+.|.|.. .+|+.+++++++||+|+|+|||+||++|+.+ + |.++|+++++ ++++||.|++.....
T Consensus 6 g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~------~~v~~v~v~~~~~~~-- 77 (160)
T 3lor_A 6 NAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDE------SQVQVIGLHSVFEHH-- 77 (160)
T ss_dssp TCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT------TTEEEEEEECCCSCG--
T ss_pred CCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCc------CCcEEEEEecccccc--
Confidence 344554433 5689999999999999999999999999995 7 9999999853 369999998621000
Q ss_pred chHHHHHHHHHHhCCCceeeccCcccChHH----HHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLIDRAV----IQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~----~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
.+.+.+...++.... .++||.+.|... ...+.+.|++.++|+++|||++|+|+..
T Consensus 78 ~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 78 DVMTPEALKVFIDEF---GIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp GGSCHHHHHHHHHHT---TCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred ccCCHHHHHHHHHHc---CCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEE
Confidence 012333444443322 223444444422 1138889999999999999999999874
No 14
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.68 E-value=1.8e-16 Score=137.66 Aligned_cols=105 Identities=14% Similarity=0.169 Sum_probs=80.6
Q ss_pred CCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHh
Q 014387 51 ATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQS 128 (425)
Q Consensus 51 ~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~ 128 (425)
.+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ .+++||.|++ | +.+....|.+. .
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~------~~v~vv~v~~-d-----~~~~~~~~~~~-~ 78 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK------GSVDMVGIAL-D-----TSDNIGNFLKQ-T 78 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT------TTEEEEEEES-S-----CHHHHHHHHHH-S
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc------CCeEEEEEEC-C-----ChHHHHHHHHH-c
Confidence 68999999999999999999999999999999 9999999843 4799999996 2 23334444331 2
Q ss_pred CCCceeeccCcccCh-HHHHHHHHhCC--CCCCCeEEEECCCCcEEcc
Q 014387 129 AMPWYTVYHPSLIDR-AVIQFIKEEWQ--FGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 129 ~mPW~aV~~p~l~D~-~~~~~L~~~f~--v~~iPtlVvLD~~GkVv~~ 173 (425)
.++ ||.+.|. .....+.+.|+ +.++|+++|||++|+++..
T Consensus 79 ~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (151)
T 3raz_A 79 PVS-----YPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQT 121 (151)
T ss_dssp CCS-----SCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEE
T ss_pred CCC-----CceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEE
Confidence 333 3333222 22457889999 9999999999999999754
No 15
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.67 E-value=2.6e-17 Score=140.63 Aligned_cols=116 Identities=18% Similarity=0.199 Sum_probs=85.5
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCch
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTD 117 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D 117 (425)
+..+|. +.+.+|+.+++++++||+|+|+|||+||++|+..+ |.++++++++ .+++||.|++.+ ..
T Consensus 8 G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~d~-----~~ 76 (148)
T 3hcz_A 8 GKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRA------KGIQVYAANIER-----KD 76 (148)
T ss_dssp TSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGG------GTEEEEEEECCS-----SS
T ss_pred CCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc------CCEEEEEEEecC-----CH
Confidence 444554 44567999999999999999999999999999999 9999999964 269999999621 12
Q ss_pred HHHHHHHHHHhCCC-ceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccc
Q 014387 118 NKQKQFQSLQSAMP-WYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 118 ~~~~~F~~~~~~mP-W~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~n 174 (425)
+..++|.+. ..++ |. .+.|..+...+.+.|++.++|+++|+|++|+++...
T Consensus 77 ~~~~~~~~~-~~~~~~~-----~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~ 128 (148)
T 3hcz_A 77 EEWLKFIRS-KKIGGWL-----NVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKR 128 (148)
T ss_dssp HHHHHHHHH-HTCTTSE-----EEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEES
T ss_pred HHHHHHHHH-cCCCCce-----EEeccccchhHHHhcCcCCCCEEEEECCCCcEEEec
Confidence 233333221 2344 33 333544333378899999999999999999998653
No 16
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.66 E-value=1.4e-16 Score=136.16 Aligned_cols=115 Identities=14% Similarity=0.265 Sum_probs=87.0
Q ss_pred CCCCCc--ccCCCCCeEecc--ccCCCEEEEEEecCCChHhHHHH--HHHHHHHH-HhhhccCCCceEEEEEeccCCCCC
Q 014387 42 DDLLPL--VDGATKTRVNLE--VLRRKMVLLLISDLDISQEEVII--LEQLYSEA-RQHQTRHESQYEVVWLPIVDPNMP 114 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls--~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~-k~~~~k~~~~fEIV~IsIvd~s~~ 114 (425)
+.++|. +...+|+.++++ +++||+|+|+|||+||++|+..+ |.++++++ ++ .+++|+.|++
T Consensus 8 g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~------~~~~~v~v~~------ 75 (148)
T 3fkf_A 8 GKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN------KNFAMLGISL------ 75 (148)
T ss_dssp TSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC------TTEEEEEEEC------
T ss_pred CCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC------CCeEEEEEEC------
Confidence 444553 445789999999 99999999999999999999999 99999998 42 3699999996
Q ss_pred CchHHHHHHHHHH--hCCCceeeccCcccChHH-HHHHHHhCCCCCCCeEEEECCCCcEEcccc
Q 014387 115 WTDNKQKQFQSLQ--SAMPWYTVYHPSLIDRAV-IQFIKEEWQFGKKPILVVLDPHGKVVCPNA 175 (425)
Q Consensus 115 w~D~~~~~F~~~~--~~mPW~aV~~p~l~D~~~-~~~L~~~f~v~~iPtlVvLD~~GkVv~~na 175 (425)
|.+.+.+.++. ..++|..+. |... ...+.+.|++.++|+++++|++|+++....
T Consensus 76 --d~~~~~~~~~~~~~~~~~~~~~-----d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 76 --DIDREAWETAIKKDTLSWDQVC-----DFTGLSSETAKQYAILTLPTNILLSPTGKILARDI 132 (148)
T ss_dssp --CSCHHHHHHHHHHTTCCSEEEC-----CSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC
T ss_pred --CCCHHHHHHHHHHcCCCceEEE-----ccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC
Confidence 22233444433 345655443 3311 347889999999999999999999987653
No 17
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.66 E-value=2.4e-16 Score=136.43 Aligned_cols=112 Identities=17% Similarity=0.254 Sum_probs=84.3
Q ss_pred CCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchH
Q 014387 43 DLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDN 118 (425)
Q Consensus 43 ~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~ 118 (425)
+++|. +...+|+.+++++++||+|+|+|||+||++|+..+ |.++++++++ .+++|+.|++.+ +..
T Consensus 4 ~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~v~~d~-----~~~ 72 (151)
T 2f9s_A 4 SDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS------QGVEIVAVNVGE-----SKI 72 (151)
T ss_dssp EECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEESC-----CHH
T ss_pred CcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEECCC-----CHH
Confidence 33453 44567999999999999999999999999999999 9999999964 369999998622 223
Q ss_pred HHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 119 KQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 119 ~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.|.+- ..+ +||.+.|.. ..+.+.|++.++|+++++|++|+++..
T Consensus 73 ~~~~~~~~-~~~-----~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 73 AVHNFMKS-YGV-----NFPVVLDTD--RQVLDAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp HHHHHHHH-HTC-----CSCEEEETT--SHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred HHHHHHHH-cCC-----CceEEECCc--hHHHHhcCCCCCCeEEEECCCCcEEEE
Confidence 33333221 223 345455542 367889999999999999999999864
No 18
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.66 E-value=4.8e-16 Score=134.17 Aligned_cols=113 Identities=18% Similarity=0.185 Sum_probs=86.0
Q ss_pred CCCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 41 KDDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 41 k~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
.++.+|. +.+ +|+.+++++++||+|+|+|||+||++|+.++ |.++++++++ .+++||.|++
T Consensus 5 ~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~-------- 69 (152)
T 3gl3_A 5 KGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKA------KGFQVVAVNL-------- 69 (152)
T ss_dssp TTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGG------GTEEEEEEEC--------
T ss_pred CCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhc------CCeEEEEEEC--------
Confidence 3444553 344 7889999999999999999999999999999 9999999964 2599999996
Q ss_pred hHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 117 DNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
|.+.+...++....+ ++||.+.|.. ..+.+.|++.++|+++|||++|+++..
T Consensus 70 d~~~~~~~~~~~~~~---~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (152)
T 3gl3_A 70 DAKTGDAMKFLAQVP---AEFTVAFDPK--GQTPRLYGVKGMPTSFLIDRNGKVLLQ 121 (152)
T ss_dssp CSSHHHHHHHHHHSC---CCSEEEECTT--CHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred CCCHHHHHHHHHHcC---CCCceeECCc--chhHHHcCCCCCCeEEEECCCCCEEEE
Confidence 222333444443333 2445455653 368899999999999999999999864
No 19
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.66 E-value=2.3e-16 Score=138.75 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=87.3
Q ss_pred CCCCCccc----CCCCCeEeccccCCCEEEEEEec-CCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCC
Q 014387 42 DDLLPLVD----GATKTRVNLEVLRRKMVLLLISD-LDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMP 114 (425)
Q Consensus 42 ~~~~pl~d----g~~g~~V~ls~LkGK~VlL~FsA-sWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~ 114 (425)
++++|.|. +.+|+.+++++++||+|+|+||+ +|||+|+.++ |.++|+++++ .+++||.|++ |
T Consensus 10 G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~------~~~~vv~vs~-d---- 78 (163)
T 3gkn_A 10 ELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDK------AGAKILGVSR-D---- 78 (163)
T ss_dssp CCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHH------TTCEEEEEES-S----
T ss_pred CCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHH------CCCEEEEEeC-C----
Confidence 45566554 57899999999999999999998 9999999999 9999999975 3699999996 2
Q ss_pred CchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCC------------CCeEEEECCCCcEEcc
Q 014387 115 WTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGK------------KPILVVLDPHGKVVCP 173 (425)
Q Consensus 115 w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~------------iPtlVvLD~~GkVv~~ 173 (425)
+.+..+.|.+. . .++||.+.|.. ..+.+.|++.. +|+++|||++|+|+..
T Consensus 79 -~~~~~~~~~~~-~-----~~~~~~~~d~~--~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 140 (163)
T 3gkn_A 79 -SVKSHDNFCAK-Q-----GFAFPLVSDGD--EALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQA 140 (163)
T ss_dssp -CHHHHHHHHHH-H-----CCSSCEEECTT--CHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEE
T ss_pred -CHHHHHHHHHH-h-----CCCceEEECCc--HHHHHHhCCccccccccccccCcceEEEEECCCCeEEEE
Confidence 23444455432 1 23455555653 36888999987 9999999999999863
No 20
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.66 E-value=1.2e-15 Score=144.02 Aligned_cols=185 Identities=11% Similarity=0.102 Sum_probs=124.3
Q ss_pred CCCCCcccC--C-CCC--eEeccc-cCCCEEEEEEe-cCCChHhH-HHH--HHHHHHHHHhhhccCCCce-EEEEEeccC
Q 014387 42 DDLLPLVDG--A-TKT--RVNLEV-LRRKMVLLLIS-DLDISQEE-VII--LEQLYSEARQHQTRHESQY-EVVWLPIVD 110 (425)
Q Consensus 42 ~~~~pl~dg--~-~g~--~V~ls~-LkGK~VlL~Fs-AsWC~pCr-~~~--L~~iY~~~k~~~~k~~~~f-EIV~IsIvd 110 (425)
++++|.|.. . +|+ .+++++ ++||+|+|+|| |+|||+|+ .++ |.++|+++++ .++ +||.||. |
T Consensus 6 G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~------~~~~~vv~is~-d 78 (241)
T 1nm3_A 6 GKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKK------YGVDDILVVSV-N 78 (241)
T ss_dssp TSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHH------TTCCEEEEEES-S
T ss_pred CCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEEc-C
Confidence 455665543 2 466 899999 99999999999 99999999 888 9999999975 369 9999995 2
Q ss_pred CCCCCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC-----------CCCeEEEECCCCcEEccccchhh
Q 014387 111 PNMPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG-----------KKPILVVLDPHGKVVCPNALHMM 179 (425)
Q Consensus 111 ~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~-----------~iPtlVvLD~~GkVv~~na~~~I 179 (425)
+....++|.+-. ..+ +||.+.|.. ..+.+.|++. .+|+++|| ++|+|+....-..
T Consensus 79 -----~~~~~~~~~~~~-~~~----~~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~- 144 (241)
T 1nm3_A 79 -----DTFVMNAWKEDE-KSE----NISFIPDGN--GEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPN- 144 (241)
T ss_dssp -----CHHHHHHHHHHT-TCT----TSEEEECTT--SHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCS-
T ss_pred -----CHHHHHHHHHhc-CCC----ceEEEECCC--cHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEecc-
Confidence 233445554321 222 255566754 4688899985 35999999 9999986532110
Q ss_pred hhcCCccCCCCchhHHHhhhhcccceeccccCCCccccccccCCeEEEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEE
Q 014387 180 WIWGSLAYPFSTAREEALWREETWRLELLVDGLDPVILNWMAEGRYICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVY 259 (425)
Q Consensus 180 ~~~g~~aFPft~~~~~~L~~~~~w~~~ll~d~~d~~i~~~~~egk~I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~ 259 (425)
..+=|+.....+++++. +. +. ......|-||....|+.|++ +++++++.++++|.+-
T Consensus 145 ----~~~~~~~~~~~~~il~~-------l~----~~----~i~~~~i~ly~~~~Cp~C~~----a~~~L~~~~i~~~~~~ 201 (241)
T 1nm3_A 145 ----EPGDPFKVSDADTMLKY-------LA----PQ----HQVQESISIFTKPGCPFCAK----AKQLLHDKGLSFEEII 201 (241)
T ss_dssp ----CSSCCCSSSSHHHHHHH-------HC----TT----SCCCCCEEEEECSSCHHHHH----HHHHHHHHTCCCEEEE
T ss_pred ----CCCccceecCHHHHHHH-------hh----hh----ccccceEEEEECCCChHHHH----HHHHHHHcCCceEEEE
Confidence 11114444556666542 11 11 12344588998888999974 4455556699999999
Q ss_pred eccCCChhHHh
Q 014387 260 VGKSNPKDRVR 270 (425)
Q Consensus 260 Vs~d~~~e~f~ 270 (425)
|..+...+.+.
T Consensus 202 i~~~~~~~~l~ 212 (241)
T 1nm3_A 202 LGHDATIVSVR 212 (241)
T ss_dssp TTTTCCHHHHH
T ss_pred CCCchHHHHHH
Confidence 98875433333
No 21
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.66 E-value=3.6e-16 Score=138.13 Aligned_cols=113 Identities=17% Similarity=0.154 Sum_probs=86.8
Q ss_pred CCCCCCcc--cCCCCCeEeccccCCCE-EEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCC
Q 014387 41 KDDLLPLV--DGATKTRVNLEVLRRKM-VLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMP 114 (425)
Q Consensus 41 k~~~~pl~--dg~~g~~V~ls~LkGK~-VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~ 114 (425)
.++++|.| .+.+|+.+++++++||+ |+|+|| |+|||+|+.++ |.++|+++++ .+++||.|++ |
T Consensus 4 ~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~vs~-d---- 72 (161)
T 3drn_A 4 VGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD------YDVVVIGVSS-D---- 72 (161)
T ss_dssp TTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHT------TCEEEEEEES-C----
T ss_pred CCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEeC-C----
Confidence 34555644 45789999999999998 999999 99999999999 9999999974 3699999995 2
Q ss_pred CchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCC----CCeEEEECCCCcEEcc
Q 014387 115 WTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGK----KPILVVLDPHGKVVCP 173 (425)
Q Consensus 115 w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~----iPtlVvLD~~GkVv~~ 173 (425)
+.+..++|.+- ..+ +||.+.|.. ..+.+.|++.+ +|+++|||++|+|+..
T Consensus 73 -~~~~~~~~~~~-~~~-----~~~~~~d~~--~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 73 -DINSHKRFKEK-YKL-----PFILVSDPD--KKIRELYGAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp -CHHHHHHHHHH-TTC-----CSEEEECTT--SHHHHHTTCCCSSSCCCEEEEECTTSBEEEE
T ss_pred -CHHHHHHHHHH-hCC-----CceEEECCc--HHHHHHcCCCCcCcccceEEEECCCCEEEEE
Confidence 23333444321 233 445555642 47889999999 9999999999999864
No 22
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.65 E-value=2e-15 Score=131.84 Aligned_cols=117 Identities=12% Similarity=0.144 Sum_probs=86.4
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChH-hHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQ-EEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQ 124 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~p-Cr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~ 124 (425)
+.+.+|+.+++++++||+|+|+|||+||+| |+.++ |.++|+++++. .+..+++||+|++ |...+ +.+..++|.
T Consensus 8 l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~--~~~~~~~vv~vs~-d~~~d-~~~~~~~~~ 83 (164)
T 2ggt_A 8 LTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSI--TTLPDLTPLFISI-DPERD-TKEAIANYV 83 (164)
T ss_dssp EEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHS--SSSCCEEEEEEES-CTTTC-CHHHHHHHH
T ss_pred EEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhc--cCCCcEEEEEEEe-CCCCC-CHHHHHHHH
Confidence 445678999999999999999999999998 99999 99999999741 1124799999996 32111 122333443
Q ss_pred HHHhCCCceeeccCcccChHHHHHHHHhCCCCCCC---------------eEEEECCCCcEEcc
Q 014387 125 SLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKP---------------ILVVLDPHGKVVCP 173 (425)
Q Consensus 125 ~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iP---------------tlVvLD~~GkVv~~ 173 (425)
+. ...+|..+.. +.+....+.+.|++..+| +++|||++|+|+..
T Consensus 84 ~~-~~~~~~~l~~----~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 142 (164)
T 2ggt_A 84 KE-FSPKLVGLTG----TREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY 142 (164)
T ss_dssp HT-TCSSCEEEEC----CHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEE
T ss_pred HH-cCCCeEEEeC----CHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEE
Confidence 31 2455655432 334456788999999999 89999999999874
No 23
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.64 E-value=9.8e-16 Score=132.47 Aligned_cols=114 Identities=15% Similarity=0.202 Sum_probs=85.3
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCch
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTD 117 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D 117 (425)
+.++|. +...+|+.+++++++||+|+|+||++||++|+..+ |.++++++++ .+++|+.|++ | +
T Consensus 5 G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~-d------~ 71 (154)
T 3kcm_A 5 ENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG------KPFRMLCVSI-D------E 71 (154)
T ss_dssp TSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT------SSEEEEEEEC-C------T
T ss_pred CCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEEc-C------C
Confidence 445554 44578999999999999999999999999999998 9999999853 3799999996 2 1
Q ss_pred HHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 118 NKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 118 ~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
.+.+...++.... .++||.+.|.. ..+.+.|++.++|+++|||++|+++..
T Consensus 72 ~~~~~~~~~~~~~---~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 72 GGKVAVEEFFRKT---GFTLPVLLDAD--KRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp THHHHHHHHHHHH---CCCCCEEECTT--CHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred cchHHHHHHHHHc---CCCeeEEecCc--hHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 1133333333221 12344445543 468899999999999999999999864
No 24
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.64 E-value=3.9e-16 Score=145.67 Aligned_cols=121 Identities=13% Similarity=0.089 Sum_probs=89.3
Q ss_pred CCCCCCc--ccCCCCCeEeccccCCC-EEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 41 KDDLLPL--VDGATKTRVNLEVLRRK-MVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 41 k~~~~pl--~dg~~g~~V~ls~LkGK-~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
.++++|. +.+.+|+.+++++++|| +|+|+|||+|||+|+.++ |.++|+++++ ++++||.|++.+....
T Consensus 34 ~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Vs~d~~~~~- 106 (218)
T 3u5r_E 34 LGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAG------QGLAVVAINSNDAQAF- 106 (218)
T ss_dssp TTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTT------TTEEEEEEECSCTTTC-
T ss_pred CCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHh------CCcEEEEEECCccccc-
Confidence 4555664 45578999999999999 699999999999999999 9999999964 3699999996321100
Q ss_pred chHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
...+.+...++.... .++||.+.|.. ..+.+.|++.++|+++|||++|+|+..
T Consensus 107 ~~d~~~~~~~~~~~~---~~~~~~l~D~~--~~~~~~~~v~~~P~~~liD~~G~i~~~ 159 (218)
T 3u5r_E 107 PEETLERVGAEVKAY---GYGFPYLKDAS--QSVAKAYGAACTPDFFLYDRERRLVYH 159 (218)
T ss_dssp GGGSHHHHHHHHHHH---TCCSCEEECTT--CHHHHHHTCCEESEEEEECTTCBEEEE
T ss_pred ccCCHHHHHHHHHHh---CCCccEEECCc--cHHHHHcCCCCCCeEEEECCCCcEEEe
Confidence 012333444443322 23566666653 468899999999999999999999854
No 25
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.63 E-value=1.1e-16 Score=142.18 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=81.6
Q ss_pred CCCCCCccc--CCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 41 KDDLLPLVD--GATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 41 k~~~~pl~d--g~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
.+++.|.|. +.+|+.+++++++||+|+|+|| |+|||+|+.++ |.++|+++++ .+++||.||. |
T Consensus 6 vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~------~~~~~v~vs~-d----- 73 (157)
T 4g2e_A 6 IGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQ------VNAVVLGISV-D----- 73 (157)
T ss_dssp TTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGG------CSSEEEEEES-S-----
T ss_pred CCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccc------cCceEeeecc-c-----
Confidence 355666554 5789999999999999999999 99999999999 9999999864 4799999995 2
Q ss_pred chHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC-----------CCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG-----------KKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~-----------~iPtlVvLD~~GkVv~~ 173 (425)
+....++|.+- .. ++||.+.|.. ..+.+.|++. ..|+++|||++|+|+..
T Consensus 74 ~~~~~~~~~~~-~~-----~~~p~l~D~~--~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~ 134 (157)
T 4g2e_A 74 PPFSNKAFKEH-NK-----LNFTILSDYN--REVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK 134 (157)
T ss_dssp CHHHHHHHHHH-TT-----CCSEEEECTT--SHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE
T ss_pred chhHHHHHHHH-cC-----CcEEEEEcCC--cHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEE
Confidence 23444555432 23 3456566764 3688889873 46889999999999754
No 26
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.63 E-value=1.5e-15 Score=132.48 Aligned_cols=113 Identities=12% Similarity=0.088 Sum_probs=82.9
Q ss_pred CCCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 41 KDDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 41 k~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
.+..+|. +...+|+.+++++++||+|+|+|||+||++|+.++ |.++++++++ .+++||.|++.+ .
T Consensus 10 ~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~------~~v~~v~v~~d~-----~ 78 (165)
T 3or5_A 10 RPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWAS------RGFTFVGIAVNE-----Q 78 (165)
T ss_dssp CCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTT------TTEEEEEEECSC-----C
T ss_pred CCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc------CCeEEEEEECCC-----C
Confidence 3445554 34578999999999999999999999999999999 9999999953 369999998621 2
Q ss_pred hHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhC------CCCCCCeEEEECCCCcEEcc
Q 014387 117 DNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEW------QFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f------~v~~iPtlVvLD~~GkVv~~ 173 (425)
....++|.+. ..++ ||.+.|.. .+.+.| ++.++|+++|+|++|+|+..
T Consensus 79 ~~~~~~~~~~-~~~~-----~~~~~~~~---~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 79 LPNVKNYMKT-QGII-----YPVMMATP---ELIRAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp HHHHHHHHHH-HTCC-----SCEEECCH---HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHH-cCCC-----CceEecCH---HHHHHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 2233333221 2333 44444543 455555 89999999999999999854
No 27
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.63 E-value=4.4e-16 Score=136.02 Aligned_cols=115 Identities=13% Similarity=0.096 Sum_probs=86.4
Q ss_pred CcccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHH
Q 014387 46 PLVDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQF 123 (425)
Q Consensus 46 pl~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F 123 (425)
|.+...+|+.++++.++||+|+|+|||+||++|+.++ |.++|++++. .+++||.|++.+.. .+...+.+
T Consensus 21 p~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~~~~~---~~~~~~~~ 91 (164)
T 2h30_A 21 STMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKF------SSANLITVASPGFL---HEKKDGEF 91 (164)
T ss_dssp TTCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGG------TTSEEEEEECTTST---TCCCTTHH
T ss_pred CccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccc------CCcEEEEEEcCCCc---cccCHHHH
Confidence 4566678899999999999999999999999999999 9999998864 36999999973211 12234456
Q ss_pred HHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 124 QSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 124 ~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
.++.....+-. +|...|. ...+.+.|++.++|+++++|++|+++..
T Consensus 92 ~~~~~~~~~~~--~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 92 QKWYAGLNYPK--LPVVTDN--GGTIAQNLNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp HHHHTTSCCTT--SCEEECT--TCHHHHHTTCCSSSEEEEECTTSCEEEE
T ss_pred HHHHHhCCCCc--ceEEEcC--chHHHHHcCCCccceEEEECCCCcEEEE
Confidence 66555433211 3333443 2468889999999999999999999864
No 28
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.63 E-value=1.1e-15 Score=127.49 Aligned_cols=112 Identities=18% Similarity=0.208 Sum_probs=84.8
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+.+.+|+.+++++++||+|+|+|||+||++|+..+ |.+++++++ .++.++.|...+.+ .+.+.+.+.+
T Consensus 7 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~v~i~~~~~~---~~~~~~~~~~ 76 (138)
T 4evm_A 7 LMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAG-------DDYVVLTVVSPGHK---GEQSEADFKN 76 (138)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-------TTEEEEEEECTTST---TCCCHHHHHH
T ss_pred eECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-------CCcEEEEEEcCCCC---chhhHHHHHH
Confidence 44567899999999999999999999999999998 888888742 36888888532211 2344566666
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
+....++. ++|.+.|.. ..+.+.|++.++|+++++|++|+++..
T Consensus 77 ~~~~~~~~--~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 77 WYKGLDYK--NLPVLVDPS--GKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp HHTTCCCT--TCCEEECTT--CHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred HHhhcCCC--CeeEEECcc--hHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 66554431 445455543 368899999999999999999999864
No 29
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.63 E-value=1.6e-15 Score=141.36 Aligned_cols=129 Identities=10% Similarity=-0.014 Sum_probs=84.0
Q ss_pred CCCCCCCcc--cCCC-CCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCC--C
Q 014387 40 PKDDLLPLV--DGAT-KTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDP--N 112 (425)
Q Consensus 40 ~k~~~~pl~--dg~~-g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~--s 112 (425)
.+...+|.| ...+ |+.+++++++||+|+|+|||+|||||+.++ |.++|+++++ ++++||.|++.+. .
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~------~g~~vv~v~~d~~~~~ 94 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGP------RGLVVLGFPCNQFGHQ 94 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTT
T ss_pred hhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccC------CCeEEEEEECCccccc
Confidence 344455544 3466 999999999999999999999999999998 9999999964 2699999996310 0
Q ss_pred CCCchHHHHHHHHHHhCCCceeeccCcccCh--------HHHHHHHHhC-------------------------CCCCCC
Q 014387 113 MPWTDNKQKQFQSLQSAMPWYTVYHPSLIDR--------AVIQFIKEEW-------------------------QFGKKP 159 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~--------~~~~~L~~~f-------------------------~v~~iP 159 (425)
..-+.+..+.|.++...-.-+.++||.+.|. +..+.+++.+ .+...|
T Consensus 95 e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p 174 (208)
T 2f8a_A 95 ENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNF 174 (208)
T ss_dssp TCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTT
T ss_pred CCCCHHHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCc
Confidence 0001233445543211000134556554221 1223444333 256679
Q ss_pred eEEEECCCCcEEccc
Q 014387 160 ILVVLDPHGKVVCPN 174 (425)
Q Consensus 160 tlVvLD~~GkVv~~n 174 (425)
+++|||++|+|+...
T Consensus 175 ~tflID~~G~i~~~~ 189 (208)
T 2f8a_A 175 EKFLVGPDGVPLRRY 189 (208)
T ss_dssp CEEEECTTSCEEEEE
T ss_pred eEEEEcCCCcEEEEe
Confidence 999999999998653
No 30
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.63 E-value=5.5e-15 Score=130.15 Aligned_cols=117 Identities=9% Similarity=0.057 Sum_probs=85.1
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChH-hHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQ-EEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQ 124 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~p-Cr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~ 124 (425)
+...+|+.+++++++||+|+|+|||+||+| |+.++ |.++|+++++.+ ...+++||+|++ |...+ +.+..+.|.
T Consensus 11 l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~v~vv~is~-d~~~d-~~~~~~~~~ 86 (171)
T 2rli_A 11 LLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEP--GLPPVQPVFITV-DPERD-DVEAMARYV 86 (171)
T ss_dssp EEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHST--TSCCEEEEEEES-CSTTC-CHHHHHHHH
T ss_pred EEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhcc--CCCceEEEEEEE-CCCCC-CHHHHHHHH
Confidence 445678999999999999999999999999 99999 999999996411 124799999996 31110 122333343
Q ss_pred HHHhCCCceeeccCcccChHHHHHHHHhCCCCCCC---------------eEEEECCCCcEEcc
Q 014387 125 SLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKP---------------ILVVLDPHGKVVCP 173 (425)
Q Consensus 125 ~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iP---------------tlVvLD~~GkVv~~ 173 (425)
+. ...+|..+.. +.+....+.+.|++..+| +++|||++|+|+..
T Consensus 87 ~~-~~~~~~~l~~----~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 87 QD-FHPRLLGLTG----STKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp HT-TCTTCCEEEC----CHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred HH-cCCCeEEEeC----CHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 21 2345544432 233445788999999888 99999999999874
No 31
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.62 E-value=1.6e-15 Score=128.70 Aligned_cols=116 Identities=10% Similarity=0.196 Sum_probs=86.4
Q ss_pred CCCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 41 KDDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 41 k~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
.+..+|. +...+|+.+++++ +||+|+|+|||+||++|+.++ |.++++++++ .+++|+.|++.+ .
T Consensus 11 ~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~-----~ 78 (145)
T 3erw_A 11 QPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS------DSVKLVTVNLVN-----S 78 (145)
T ss_dssp -CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC------SSEEEEEEECGG-----G
T ss_pred CCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC------CCEEEEEEEccC-----C
Confidence 3445664 4457899999999 999999999999999999998 9999998842 369999999622 1
Q ss_pred hHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 117 DNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
+.+.+.+.++..... ++||.+.|.. ..+.+.|++.++|+++++|++|+++..
T Consensus 79 ~~~~~~~~~~~~~~~---~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 130 (145)
T 3erw_A 79 EQNQQVVEDFIKANK---LTFPIVLDSK--GELMKEYHIITIPTSFLLNEKGEIEKT 130 (145)
T ss_dssp SSCHHHHHHHHHHTT---CCSCEEECSS--SHHHHHTTCCEESEEEEECTTCCEEEE
T ss_pred cCCHHHHHHHHHHcC---CceeEEEcCc--hhHHHhcCcCccCeEEEEcCCCcEEEE
Confidence 124444555443322 2455555543 368899999999999999999999763
No 32
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.61 E-value=1.8e-15 Score=130.54 Aligned_cols=115 Identities=12% Similarity=0.122 Sum_probs=86.1
Q ss_pred CCCCC-c--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 42 DDLLP-L--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 42 ~~~~p-l--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
+.++| . +...+|+.+++++++||+|+|+|||+||++|+..+ |.++++++++ .++.|+.|++.+ .
T Consensus 6 G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~d~-----~ 74 (152)
T 2lja_A 6 GNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAG------KDIHFVSLSCDK-----N 74 (152)
T ss_dssp TCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT------SSEEEEEEECCS-----C
T ss_pred CCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc------CCeEEEEEEccC-----c
Confidence 44455 4 44578999999999999999999999999999988 9999998843 369999998621 1
Q ss_pred hHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccc
Q 014387 117 DNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~n 174 (425)
....++|.+ ...++|+.+.. |. ...+.+.|++.++|+++|+|++|+++...
T Consensus 75 ~~~~~~~~~-~~~~~~~~~~~----d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 125 (152)
T 2lja_A 75 KKAWENMVT-KDQLKGIQLHM----GT--DRTFMDAYLINGIPRFILLDRDGKIISAN 125 (152)
T ss_dssp HHHHHHHHH-HHTCCSEEEEC----SS--CTHHHHHTTCCSSCCEEEECTTSCEEESS
T ss_pred HHHHHHHHH-hcCCCCceeec----Cc--chhHHHHcCcCCCCEEEEECCCCeEEEcc
Confidence 222233322 23566655442 43 24688899999999999999999998753
No 33
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.61 E-value=2.4e-15 Score=134.89 Aligned_cols=117 Identities=17% Similarity=0.170 Sum_probs=81.5
Q ss_pred CCCCcc--cCC--CCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 43 DLLPLV--DGA--TKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 43 ~~~pl~--dg~--~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
.++|.| ... +|+.+++++++||+|+|+|||+||++|+..+ |.++|+++++..-+...+++||.|++.+
T Consensus 35 ~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~------ 108 (183)
T 3lwa_A 35 QQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD------ 108 (183)
T ss_dssp CCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC------
T ss_pred CCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC------
Confidence 345544 456 8999999999999999999999999999999 9999999975100001233999998621
Q ss_pred hHHHHHHHHHHh--CCCceeeccCcccChHHHHHHHHhC---CCCCCCeEEEECCCCcEEcc
Q 014387 117 DNKQKQFQSLQS--AMPWYTVYHPSLIDRAVIQFIKEEW---QFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 117 D~~~~~F~~~~~--~mPW~aV~~p~l~D~~~~~~L~~~f---~v~~iPtlVvLD~~GkVv~~ 173 (425)
.+.+...++.. .++ ||.+.|.. ..+.+.| ++.++|+++|||++|+++..
T Consensus 109 -~~~~~~~~~~~~~~~~-----~~~~~d~~--~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 109 -YSRDIAQDFVTDNGLD-----YPSIYDPP--FMTAASLGGVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp -CCHHHHHHHHHHTTCC-----SCEEECTT--CGGGGGTTTCCTTCCSEEEEECTTSCEEEE
T ss_pred -CCHHHHHHHHHHcCCC-----ccEEECCc--chHHHHhccCCCCCCCeEEEECCCCcEEEE
Confidence 02333444332 344 44444543 2344454 68999999999999999864
No 34
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.61 E-value=1.8e-15 Score=136.21 Aligned_cols=119 Identities=13% Similarity=0.169 Sum_probs=86.5
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCch
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTD 117 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D 117 (425)
+..+|. +.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ + ++||.|++.+. ....+
T Consensus 10 g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~-~~~v~v~~d~~-~~~~~ 81 (188)
T 2cvb_A 10 ESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRG------K-VAFVGINANDY-EKYPE 81 (188)
T ss_dssp TCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT------T-EEEEEEECCCT-TTCGG
T ss_pred CCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc------C-eEEEEEEcCcc-ccccc
Confidence 444554 34578999999999999999999999999999988 9999999842 3 99999986211 00001
Q ss_pred HHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 118 NKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 118 ~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
.+.+...++.... .++||.+.|.. ..+.+.|++.++|+++|||++|+|+..
T Consensus 82 d~~~~~~~~~~~~---~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 82 DAPEKMAAFAEEH---GIFFPYLLDET--QEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp GSHHHHHHHHHHH---TCCSCEEECSS--SHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred cCHHHHHHHHHHh---CCCceEEECCc--chHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 2333444433322 23455555643 367889999999999999999999876
No 35
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.61 E-value=1.7e-15 Score=134.84 Aligned_cols=115 Identities=16% Similarity=0.173 Sum_probs=74.6
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+.+.+|+.+++++++||+|+|+|||+||+||+ ++ |.++|+++++ .+++||.|++.+...+.. .+.+...+
T Consensus 17 l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~~~-d~~~~~~~ 88 (171)
T 3cmi_A 17 PVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKD------EGFTIIGFPCNQFGHQEP-GSDEEIAQ 88 (171)
T ss_dssp CBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGG------GTEEEEEEEECSCC-------------
T ss_pred EEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhcc------CCeEEEEEECcccCCCCC-CCHHHHHH
Confidence 34567899999999999999999999999999 88 9999999964 269999999621000000 11222222
Q ss_pred HH-hCCCceeeccCcccChH--------HHHH-HHHhCCCCCCC------eEEEECCCCcEEcc
Q 014387 126 LQ-SAMPWYTVYHPSLIDRA--------VIQF-IKEEWQFGKKP------ILVVLDPHGKVVCP 173 (425)
Q Consensus 126 ~~-~~mPW~aV~~p~l~D~~--------~~~~-L~~~f~v~~iP------tlVvLD~~GkVv~~ 173 (425)
+. .. +.++||.+.|.. ..+. ..+.|++.++| +++|||++|+|+..
T Consensus 89 ~~~~~---~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 89 FCQLN---YGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp ---------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred HHHhc---cCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEE
Confidence 22 22 123444443211 1112 23468999999 99999999999875
No 36
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.61 E-value=1.7e-15 Score=129.09 Aligned_cols=117 Identities=12% Similarity=0.197 Sum_probs=85.6
Q ss_pred CCCCCcccC----CCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 42 DDLLPLVDG----ATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 42 ~~~~pl~dg----~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
++++|.|.. .+|+.+++++++||+|+|+|||+||++|+.++ |.++++++++ ++.|+.|++.+...
T Consensus 4 g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-------~~~~~~v~~~~~~~-- 74 (148)
T 2b5x_A 4 RQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-------QLNVVAVHMPRSED-- 74 (148)
T ss_dssp TCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TSEEEEEECCCSTT--
T ss_pred CCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-------CcEEEEEEcCCCcc--
Confidence 455666654 47899999999999999999999999999999 9999999853 39999998632111
Q ss_pred chHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
+.+.+...++..... ++||.+.|.. ..+.+.|++.++|+++++|++|+++..
T Consensus 75 -~~~~~~~~~~~~~~~---~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 75 -DLDPGKIKETAAEHD---ITQPIFVDSD--HALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp -TSSHHHHHHHHHHTT---CCSCEEECSS--CHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred -ccCHHHHHHHHHHcC---CCcceEECCc--hhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 113334444433322 2444444542 367889999999999999999999864
No 37
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.61 E-value=1.2e-15 Score=134.15 Aligned_cols=109 Identities=14% Similarity=0.196 Sum_probs=81.0
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccC-----------CCCC
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVD-----------PNMP 114 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd-----------~s~~ 114 (425)
+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.+++++++ +++||.|++.. ...
T Consensus 22 l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--------~v~vv~i~~d~~~~~~~~~~~~~~~- 92 (165)
T 3ha9_A 22 LTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--------EISVIAIDFWTAEALKALGLNKPGY- 92 (165)
T ss_dssp EEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEECCSHHHHHHHTCCSTTS-
T ss_pred eecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--------CcEEEEEEecccccccccccccccC-
Confidence 44567899999999999999999999999999999 999998872 69999998620 000
Q ss_pred CchHHHHHHHHHHh--CCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 115 WTDNKQKQFQSLQS--AMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 115 w~D~~~~~F~~~~~--~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
-...+.+.+.++.. .+| +||.+.| ...+.+.|++.++|+++|||++|+|+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~----~~~~~~d---~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 93 PPPDTPEMFRKFIANYGDP----SWIMVMD---DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp CCCCCHHHHHHHHHHHSCT----TSEEEEC---CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred CCCCCHHHHHHHHHHcCCC----CeeEEeC---hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 00023334444332 331 3444455 247889999999999999999999998
No 38
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.61 E-value=1.1e-15 Score=143.42 Aligned_cols=121 Identities=18% Similarity=0.144 Sum_probs=89.9
Q ss_pred CCCCCCCcccCC-----CCCeEeccccCCCEEEEEEec-CCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCC
Q 014387 40 PKDDLLPLVDGA-----TKTRVNLEVLRRKMVLLLISD-LDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDP 111 (425)
Q Consensus 40 ~k~~~~pl~dg~-----~g~~V~ls~LkGK~VlL~FsA-sWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~ 111 (425)
..++++|.|... +|+.+++++++||+|+|+||| +||++|+.++ |.++|+++++ ++++||+|++ |
T Consensus 41 ~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~------~~v~vv~Is~-D- 112 (222)
T 3ztl_A 41 LPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNS------RNCQVIACST-D- 112 (222)
T ss_dssp CSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-
T ss_pred cCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-
Confidence 345556655432 458999999999999999997 9999999999 9999999974 3699999996 3
Q ss_pred CCCCchHHHHHHHHHH-hCCCceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEccc
Q 014387 112 NMPWTDNKQKQFQSLQ-SAMPWYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 112 s~~w~D~~~~~F~~~~-~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~n 174 (425)
+..+.+.|.+.. ....-..++||.+.|.. ..+.+.|++. .+|+++|||++|+|+...
T Consensus 113 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~ 176 (222)
T 3ztl_A 113 ----SQYSHLAWDNLDRKSGGLGHMKIPLLADRK--QEISKAYGVFDEEDGNAFRGLFIIDPNGILRQIT 176 (222)
T ss_dssp ----CHHHHHHHHHSCGGGTSCCSCSSCEEECSS--SHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEE
T ss_pred ----CHHHHHHHHHHhhhhccccccceeEEeCCc--hHHHHHcCCeecCCCCccceEEEECCCCeEEEEE
Confidence 344555665432 11111134555565653 4788899998 899999999999998753
No 39
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.60 E-value=4.6e-15 Score=133.12 Aligned_cols=122 Identities=17% Similarity=0.173 Sum_probs=86.8
Q ss_pred CCCCC---cccCCCCCeEeccccCCCEEEEEEecCCCh-HhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 42 DDLLP---LVDGATKTRVNLEVLRRKMVLLLISDLDIS-QEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 42 ~~~~p---l~dg~~g~~V~ls~LkGK~VlL~FsAsWC~-pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
++++| .+.+.+|+.+++++|+||+|+|+||++||| +|..++ |.++|+++++ .+.+++||+||+ |+ .+
T Consensus 4 G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~----~~~~~~vv~is~-d~-~d- 76 (170)
T 3me7_A 4 GTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGT----PGKDFWVITFTF-DP-KD- 76 (170)
T ss_dssp TCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCC----BTTTBEEEEEEC-CT-TC-
T ss_pred CCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhh----cCCceEEEEEEC-CC-CC-
Confidence 44556 345678999999999999999999999997 699999 9999999953 245799999997 32 11
Q ss_pred chHHHHHHHHH-HhCCC-ceeeccCcccChHHHHHHHHhCCC---------CCCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSL-QSAMP-WYTVYHPSLIDRAVIQFIKEEWQF---------GKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~-~~~mP-W~aV~~p~l~D~~~~~~L~~~f~v---------~~iPtlVvLD~~GkVv~~ 173 (425)
+.+..++|.+. ....| |.-+. ..|.+....+.+.|++ ...|+++|||++|+|+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~w~~l~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 77 TLEDIKRFQKEYGIDGKGWKVVK---AKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp CHHHHHHHHHHTTCCSSSEEEEE---ESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred CHHHHHHHHHHcCCCCCCeEEEe---CCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 23344455332 22223 53221 1244556778888774 467899999999999853
No 40
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.60 E-value=1.8e-16 Score=144.11 Aligned_cols=117 Identities=12% Similarity=0.105 Sum_probs=79.6
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+.+.+|+.+++++++||+|+|+|||+|||||+.++ |.++|+++++ ++++||.|++.+-... ...+.+...+
T Consensus 31 l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~~~vi~is~d~~~~~-e~~~~~~~~~ 103 (187)
T 3dwv_A 31 VLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKS------QGFTVLAFPSNQFGGQ-EPGNEEEIKE 103 (187)
T ss_dssp CBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGG------GTCEEEEEEBCCCSSC-SSSBTTHHHH
T ss_pred EEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhh------CCeEEEEEECcccCCC-CCCCHHHHHH
Confidence 44578999999999999999999999999999999 9999999975 2699999996210000 0012234444
Q ss_pred HHhCCCceeeccCccc--ChHH------HHHHH----HhCCCCCCC---eEEEECCCCcEEcc
Q 014387 126 LQSAMPWYTVYHPSLI--DRAV------IQFIK----EEWQFGKKP---ILVVLDPHGKVVCP 173 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~--D~~~------~~~L~----~~f~v~~iP---tlVvLD~~GkVv~~ 173 (425)
+... -|.++||.+. |..+ .+.+. ..|++..+| +++|||++|+|+..
T Consensus 104 ~~~~--~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 104 FVCT--KFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp SCCB--CCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEE
T ss_pred HHHh--ccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEE
Confidence 4331 1233444442 2111 12222 445677888 99999999999875
No 41
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.60 E-value=1.2e-15 Score=143.87 Aligned_cols=120 Identities=13% Similarity=0.077 Sum_probs=88.0
Q ss_pred CCCCCCccc--CC--CC--CeEecccc-CCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccC
Q 014387 41 KDDLLPLVD--GA--TK--TRVNLEVL-RRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVD 110 (425)
Q Consensus 41 k~~~~pl~d--g~--~g--~~V~ls~L-kGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd 110 (425)
.++++|.|. +. +| +.++++++ +||+|+|+|| |+|||+|+.++ |.++|+++++ ++++||.||+ |
T Consensus 27 ~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~------~~v~vv~Is~-D 99 (221)
T 2c0d_A 27 VTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN------KNVELLGISV-D 99 (221)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH------TTEEEEEEES-S
T ss_pred CCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEeC-C
Confidence 344556544 34 68 89999999 9999999999 99999999999 9999999975 3699999996 2
Q ss_pred CCCCCchHHHHHHHHHHhCCCce-eeccCcccChHHHHHHHHhCCC-----CCCCeEEEECCCCcEEccc
Q 014387 111 PNMPWTDNKQKQFQSLQSAMPWY-TVYHPSLIDRAVIQFIKEEWQF-----GKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 111 ~s~~w~D~~~~~F~~~~~~mPW~-aV~~p~l~D~~~~~~L~~~f~v-----~~iPtlVvLD~~GkVv~~n 174 (425)
+....++|.+.....+-+ .++||.+.|.. ..+.+.|++ ..+|+++|||++|+|+...
T Consensus 100 -----~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~ 162 (221)
T 2c0d_A 100 -----SVYSHLAWKNMPIEKGGIGNVEFTLVSDIN--KDISKNYNVLYDNSFALRGLFIIDKNGCVRHQT 162 (221)
T ss_dssp -----CHHHHHHHHHSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred -----CHHHHHHHHHHhhhhcCccCCceEEEECCc--hHHHHHcCCcccCCCccceEEEECCCCeEEEEE
Confidence 233445554422100101 23455566643 468889999 4799999999999998764
No 42
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.60 E-value=1.5e-15 Score=141.75 Aligned_cols=120 Identities=16% Similarity=0.101 Sum_probs=87.7
Q ss_pred CCCCCCcccC-----CCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC
Q 014387 41 KDDLLPLVDG-----ATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN 112 (425)
Q Consensus 41 k~~~~pl~dg-----~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s 112 (425)
.++++|.|.. .+|+.+++++++||+|+|+|| |+|||+|+.++ |.++|+++++ .+++||.||+ |
T Consensus 21 ~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~------~~v~vv~Is~-D-- 91 (211)
T 2pn8_A 21 QSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS------INTEVVACSV-D-- 91 (211)
T ss_dssp SSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S--
T ss_pred CCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C--
Confidence 3455665543 246899999999999999999 99999999999 9999999964 3799999996 2
Q ss_pred CCCchHHHHHHHHHHhCCC-ceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEccc
Q 014387 113 MPWTDNKQKQFQSLQSAMP-WYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~~~mP-W~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~n 174 (425)
+....+.|.+...... .-.++||.+.|.. ..+.+.|++. .+|+++|||++|+|+...
T Consensus 92 ---~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 92 ---SQFTHLAWINTPRRQGGLGPIRIPLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp ---CHHHHHHHHTSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred ---CHHHHHHHHHHhhhccCccCCceEEEECCc--hHHHHHcCCcccCCCcccceEEEECCCCEEEEEE
Confidence 2333344433211000 0034566666753 4788899984 699999999999998754
No 43
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.60 E-value=2.7e-15 Score=126.32 Aligned_cols=103 Identities=14% Similarity=0.066 Sum_probs=78.9
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+.+.+|+.+++++++||+|+|+|||+||++|+..+ |.+++++++ +++++.|++.+ +.+..++|.+
T Consensus 9 l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~-----~~~~~~~~~~ 75 (136)
T 1lu4_A 9 ATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--------AVTFVGIATRA-----DVGAMQSFVS 75 (136)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSS-----CHHHHHHHHH
T ss_pred eecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--------CcEEEEEEcCC-----CHHHHHHHHH
Confidence 45567899999999999999999999999999988 888888762 68999998621 2333333322
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
. ..+ +||.+.|.. ..+.+.|++.++|+++++|++|+++
T Consensus 76 ~-~~~-----~~~~~~d~~--~~~~~~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 76 K-YNL-----NFTNLNDAD--GVIWARYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp H-HTC-----CSEEEECTT--SHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred H-cCC-----CceEEECCc--hhHHHhcCCCCCCEEEEECCCCcEE
Confidence 1 233 344444542 3678899999999999999999998
No 44
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.59 E-value=4.3e-15 Score=139.95 Aligned_cols=120 Identities=13% Similarity=0.029 Sum_probs=78.0
Q ss_pred ccCCC-CCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCC--CCCCchHHHHH
Q 014387 48 VDGAT-KTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDP--NMPWTDNKQKQ 122 (425)
Q Consensus 48 ~dg~~-g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~--s~~w~D~~~~~ 122 (425)
+.+.+ |+.+++++|+||+|+|+|||+|||||+ ++ |+++|+++++ ++++||.||..+- ....+.+..++
T Consensus 40 l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~------~g~~Vlgvs~d~f~~~e~~~~~~i~~ 112 (215)
T 2i3y_A 40 AIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKP------YGLVVLGFPCNQFGKQEPGDNKEILP 112 (215)
T ss_dssp EEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCSCHHHHHH
T ss_pred eeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhcc------CCeEEEEEEccccCcCCCCCHHHHHH
Confidence 44567 899999999999999999999999999 77 9999999975 3699999996311 00112233445
Q ss_pred HHHHHhCCCceeeccCcccCh--------HHHHHHHHhC-------C--------------CCCCCeEEEECCCCcEEcc
Q 014387 123 FQSLQSAMPWYTVYHPSLIDR--------AVIQFIKEEW-------Q--------------FGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 123 F~~~~~~mPW~aV~~p~l~D~--------~~~~~L~~~f-------~--------------v~~iPtlVvLD~~GkVv~~ 173 (425)
|.++...-.=+.++||.+.|. +..+.+.... + +...|+.+|||++|+|+..
T Consensus 113 f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~ 192 (215)
T 2i3y_A 113 GLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMR 192 (215)
T ss_dssp HHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred HHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEE
Confidence 544210000134456655321 1123344321 1 2233899999999999875
Q ss_pred c
Q 014387 174 N 174 (425)
Q Consensus 174 n 174 (425)
.
T Consensus 193 ~ 193 (215)
T 2i3y_A 193 W 193 (215)
T ss_dssp E
T ss_pred e
Confidence 3
No 45
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.59 E-value=2.6e-15 Score=134.79 Aligned_cols=115 Identities=20% Similarity=0.205 Sum_probs=82.4
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCch
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTD 117 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D 117 (425)
+..+|. +.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ .+++||.|++ |.. +.
T Consensus 37 g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~-d~~---~~ 106 (186)
T 1jfu_A 37 PLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSG------PNFEVVAINI-DTR---DP 106 (186)
T ss_dssp CCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB------TTEEEEEEEC-CCS---CT
T ss_pred CCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc------CCcEEEEEEC-CCC---CH
Confidence 444554 44578999999999999999999999999999999 9999999952 4799999996 210 11
Q ss_pred HHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC----CCCeEEEECCCCcEEcc
Q 014387 118 NKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG----KKPILVVLDPHGKVVCP 173 (425)
Q Consensus 118 ~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~----~iPtlVvLD~~GkVv~~ 173 (425)
+..+.|.+-. .+++ ||.+.|.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 107 ~~~~~~~~~~-~~~~----~~~~~d~~--~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 107 EKPKTFLKEA-NLTR----LGYFNDQK--AKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp THHHHHHHHT-TCCT----TCCEECTT--CHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHc-CCCC----CceEECCc--chHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 2334443321 2221 33334543 3456666664 89999999999999864
No 46
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.59 E-value=3.6e-15 Score=134.87 Aligned_cols=105 Identities=12% Similarity=0.108 Sum_probs=82.2
Q ss_pred cCCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 49 DGATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 49 dg~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
.+.+|+.+++++|+||+|+|+|| |+||++|+.++ |.++|+++++ .+++||.|+. | +.+..++|.+
T Consensus 37 ~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~------~~~~vv~Vs~-D-----~~~~~~~~~~ 104 (179)
T 3ixr_A 37 MLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQ------INATVLGVSR-D-----SVKSHDSFCA 104 (179)
T ss_dssp EEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHT------TTEEEEEEES-C-----CHHHHHHHHH
T ss_pred ECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEcC-C-----CHHHHHHHHH
Confidence 34678999999999999999998 99999999999 9999999974 3799999995 3 3444555544
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCC------------CCeEEEECCCCcEEcc
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGK------------KPILVVLDPHGKVVCP 173 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~------------iPtlVvLD~~GkVv~~ 173 (425)
- . .++||.+.|.. ..+.+.|++.. +|+++|||++|+|+..
T Consensus 105 ~-~-----~~~f~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~ 156 (179)
T 3ixr_A 105 K-Q-----GFTFPLVSDSD--AILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEA 156 (179)
T ss_dssp H-H-----TCCSCEEECTT--CHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEE
T ss_pred H-c-----CCceEEEECCc--hHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEE
Confidence 2 1 23455556653 36788899853 6999999999999864
No 47
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.59 E-value=1.1e-15 Score=139.75 Aligned_cols=119 Identities=13% Similarity=0.107 Sum_probs=90.7
Q ss_pred CCCCCccc--CC--CCC---eEecccc-CCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccC
Q 014387 42 DDLLPLVD--GA--TKT---RVNLEVL-RRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVD 110 (425)
Q Consensus 42 ~~~~pl~d--g~--~g~---~V~ls~L-kGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd 110 (425)
++.+|.|. +. +|+ .++++++ +||+|+|+|| |+||++|+.++ |.++|+++++ .+++||.|++ |
T Consensus 4 G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-d 76 (198)
T 1zof_A 4 TKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE------KGFNVIGVSI-D 76 (198)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH------TTEEEEEEES-S
T ss_pred CCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEEC-C
Confidence 44455443 34 687 9999999 9999999999 99999999999 9999999975 3699999995 2
Q ss_pred CCCCCchHHHHHHHH-HHhCCCceeeccCcccChHHHHHHHHhCCCC-----CCCeEEEECCCCcEEccc
Q 014387 111 PNMPWTDNKQKQFQS-LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG-----KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 111 ~s~~w~D~~~~~F~~-~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~-----~iPtlVvLD~~GkVv~~n 174 (425)
..+..+.|.+ +.....++.++||.+.|.. ..+.+.|++. ++|+++|||++|+|+...
T Consensus 77 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~ 139 (198)
T 1zof_A 77 -----SEQVHFAWKNTPVEKGGIGQVSFPMVADIT--KSISRDYDVLFEEAIALRGAFLIDKNMKVRHAV 139 (198)
T ss_dssp -----CHHHHHHHHTSCGGGTCCCCCSSCEEECTT--SHHHHHTTCEETTTEECEEEEEEETTTEEEEEE
T ss_pred -----CHHHHHHHHHhhhhcccccCceeEEEECCc--hHHHHHhCCcccCCcccceEEEECCCCEEEEEE
Confidence 2233344432 1222345566777777753 4788899999 999999999999998754
No 48
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.58 E-value=4e-15 Score=130.32 Aligned_cols=110 Identities=14% Similarity=0.128 Sum_probs=83.2
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCch
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTD 117 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D 117 (425)
++.+|. +...+|+.+++++++||+|+|+|||+||++|+..+ |.++++++++ .++.||.|++ |
T Consensus 18 G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~--------d 83 (158)
T 3hdc_A 18 GALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK------GDLVVLAVNV--------E 83 (158)
T ss_dssp TSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST------TSEEEEEEEC--------S
T ss_pred CCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc------CCeEEEEEeC--------C
Confidence 444554 44578999999999999999999999999999998 9999999853 4689999985 2
Q ss_pred HHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 118 NKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 118 ~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
.+...| .... .++||.+.|.. ..+.+.|++.++|+++|||++|+|+..
T Consensus 84 ~~~~~~---~~~~---~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 131 (158)
T 3hdc_A 84 KRFPEK---YRRA---PVSFNFLSDAT--GQVQQRYGANRLPDTFIVDRKGIIRQR 131 (158)
T ss_dssp SSCCGG---GGGC---CCSCEEEECTT--SHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HHHHHH---HHHc---CCCceEEECch--HHHHHHhCCCCcceEEEEcCCCCEEEE
Confidence 221222 2221 23444445543 478899999999999999999999864
No 49
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.58 E-value=3.8e-15 Score=142.12 Aligned_cols=120 Identities=15% Similarity=0.071 Sum_probs=90.4
Q ss_pred CCCCCCccc-----CCCCCeEeccccCCCEEEEEEec-CCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC
Q 014387 41 KDDLLPLVD-----GATKTRVNLEVLRRKMVLLLISD-LDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN 112 (425)
Q Consensus 41 k~~~~pl~d-----g~~g~~V~ls~LkGK~VlL~FsA-sWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s 112 (425)
.++++|.|. +.+|+.+++++|+||+|+|+||+ +|||+|..++ |.++|+++++ .+++||.||. |
T Consensus 50 vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~------~gv~vv~Is~-D-- 120 (240)
T 3qpm_A 50 ISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRA------INTEVVACSV-D-- 120 (240)
T ss_dssp TTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHT------TTEEEEEEES-S--
T ss_pred CCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEEC-C--
Confidence 455677665 34467999999999999999999 9999999999 9999999974 3699999995 2
Q ss_pred CCCchHHHHHHHHHH-hCCCceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEccc
Q 014387 113 MPWTDNKQKQFQSLQ-SAMPWYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~-~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~n 174 (425)
+......|.+.. ....-..++||.+.|.. ..+.+.|++. .+|+++|||++|+|+...
T Consensus 121 ---~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~--~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~ 184 (240)
T 3qpm_A 121 ---SQFTHLAWIITPRKQGGLGPMKIPLLSDLT--HQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQIT 184 (240)
T ss_dssp ---CHHHHHHHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred ---CHHHHHHHHHHHHhhcCCCCCceeEEeCch--HHHHHHhCCccccCCCccceEEEEcCCCeEEEEE
Confidence 234445554421 11111134666666764 4788999997 689999999999998753
No 50
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.58 E-value=2.3e-15 Score=131.73 Aligned_cols=116 Identities=15% Similarity=0.073 Sum_probs=85.8
Q ss_pred CCCCCCc--ccCCCCCeEeccccCCC-EEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCC
Q 014387 41 KDDLLPL--VDGATKTRVNLEVLRRK-MVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMP 114 (425)
Q Consensus 41 k~~~~pl--~dg~~g~~V~ls~LkGK-~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~ 114 (425)
.++.+|. +.+.+|+.+++++++|| +|+|+|| |+||++|+.++ |.++|+++++ .+++||.|++ |
T Consensus 11 ~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~~~vv~is~-d---- 79 (160)
T 1xvw_A 11 VGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN------DDSAALAISV-G---- 79 (160)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS------SSEEEEEEES-C----
T ss_pred CCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCcEEEEEeC-C----
Confidence 3445554 44578999999999998 9999998 99999999999 9999998853 3799999996 2
Q ss_pred CchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC----CCC--eEEEECCCCcEEccc
Q 014387 115 WTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG----KKP--ILVVLDPHGKVVCPN 174 (425)
Q Consensus 115 w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~----~iP--tlVvLD~~GkVv~~n 174 (425)
+.+..+.|.+. .. ++||.+.|......+.+.|++. ++| +++|||++|+|+...
T Consensus 80 -~~~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~ 138 (160)
T 1xvw_A 80 -PPPTHKIWATQ-SG-----FTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAE 138 (160)
T ss_dssp -CHHHHHHHHHH-HT-----CCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEE
T ss_pred -CHHHHHHHHHh-cC-----CCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEE
Confidence 23333444332 12 2455555630124678899998 999 999999999998653
No 51
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.58 E-value=2.3e-15 Score=135.90 Aligned_cols=120 Identities=13% Similarity=0.145 Sum_probs=86.1
Q ss_pred CCCCCc--cc-CCCCCeEeccccCCC-EEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 42 DDLLPL--VD-GATKTRVNLEVLRRK-MVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 42 ~~~~pl--~d-g~~g~~V~ls~LkGK-~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
++..|. +. ..+|+.+++++++|| +|+|+|||+||++|+.++ |.++++++++ ++++||.|++......
T Consensus 21 g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~v~~d~~~~~- 93 (196)
T 2ywi_A 21 GKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMP------KGVSFVAINSNDAEQY- 93 (196)
T ss_dssp TCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEECSCTTTC-
T ss_pred CCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHh------CCcEEEEEECCccccc-
Confidence 445554 44 678999999999998 599999999999999999 9999999964 2699999996211000
Q ss_pred chHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
...+.+...++.... .++||.+.|.. ..+.+.|++.++|+++|||++|+|+..
T Consensus 94 ~~d~~~~~~~~~~~~---~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 94 PEDSPENMKKVAEEL---GYPFPYLYDET--QEVAKAYDAACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp GGGSHHHHHHHHHHH---TCCSCEEECSS--CHHHHHHTCCEESEEEEEETTCBEEEE
T ss_pred cccCHHHHHHHHHHc---CCCceEEECCc--hHHHHHhCCCCCCeEEEEcCCCeEEEc
Confidence 002233333333221 23455555543 367889999999999999999999875
No 52
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.57 E-value=3.4e-15 Score=139.97 Aligned_cols=120 Identities=15% Similarity=0.115 Sum_probs=90.5
Q ss_pred CCCCCCccc-----CCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC
Q 014387 41 KDDLLPLVD-----GATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN 112 (425)
Q Consensus 41 k~~~~pl~d-----g~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s 112 (425)
.++++|.|. +.+|+.+++++++||+|+|+|| |+|||+|+.++ |.++|+++++ .+++||.|++ |
T Consensus 29 ~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-D-- 99 (220)
T 1zye_A 29 VTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD------VNCEVVAVSV-D-- 99 (220)
T ss_dssp TTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH------TTEEEEEEES-S--
T ss_pred CCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C--
Confidence 355566554 4568999999999999999999 99999999999 9999999975 3699999996 2
Q ss_pred CCCchHHHHHHHH-HHhCCCceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEccc
Q 014387 113 MPWTDNKQKQFQS-LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 113 ~~w~D~~~~~F~~-~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~n 174 (425)
.....++|.+ +.....+..++||.+.|.. ..+.+.|++. .+|+++|||++|+|+...
T Consensus 100 ---~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~ 163 (220)
T 1zye_A 100 ---SHFSHLAWINTPRKNGGLGHMNIALLSDLT--KQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLS 163 (220)
T ss_dssp ---CHHHHHHHHTSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred ---CHHHHHHHHHHHHHhCCCcCCceEEEECCc--HHHHHHhCCeecCCCcccceEEEECCCCEEEEEE
Confidence 2333444433 2122222245666666753 4788999999 999999999999998753
No 53
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.57 E-value=2.8e-14 Score=125.17 Aligned_cols=120 Identities=14% Similarity=0.179 Sum_probs=79.7
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCC--CCCC
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDP--NMPW 115 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~--s~~w 115 (425)
+..+|. +...+|+.+++++++||+|+|+|||+|||+|+.++ |.++|+++++ ++++||.|++.+. ....
T Consensus 8 g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~d~~~~~~~~ 81 (169)
T 2v1m_A 8 WNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG------KGLRILAFPCNQFGGQEPW 81 (169)
T ss_dssp CCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCS
T ss_pred CcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc------CCeEEEEEECCccCCCCCC
Confidence 334454 44578999999999999999999999999999999 9999999964 2699999996310 0011
Q ss_pred chHHHHHH-HHHHhCCCceeeccCccc--ChHH------HHHHH-HhCC-----CCCCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQF-QSLQSAMPWYTVYHPSLI--DRAV------IQFIK-EEWQ-----FGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F-~~~~~~mPW~aV~~p~l~--D~~~------~~~L~-~~f~-----v~~iPtlVvLD~~GkVv~~ 173 (425)
+.+..+.| .+- ...+ ||.+. |..+ .+.+. ..++ +..+|+++|||++|+|+..
T Consensus 82 ~~~~~~~~~~~~-~~~~-----~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 82 AEAEIKKFVTEK-YGVQ-----FDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp CHHHHHHHHHHH-HCCC-----SEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEE
T ss_pred CHHHHHHHHHHh-cCCC-----CceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEE
Confidence 23344455 221 2333 33221 2211 12222 2234 5667999999999999875
No 54
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.57 E-value=3.5e-15 Score=135.93 Aligned_cols=117 Identities=11% Similarity=0.089 Sum_probs=86.3
Q ss_pred CCCCCccc--CC-CC--CeEeccccCCCEEEEEEec-CCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCC
Q 014387 42 DDLLPLVD--GA-TK--TRVNLEVLRRKMVLLLISD-LDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNM 113 (425)
Q Consensus 42 ~~~~pl~d--g~-~g--~~V~ls~LkGK~VlL~FsA-sWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~ 113 (425)
+++.|.|. +. +| +.+++++++||+|+|+||+ +|||+|+.++ |.++|+++++ .+++||.||+ |
T Consensus 4 G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~------~~v~vv~Is~-d--- 73 (186)
T 1n8j_A 4 NTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQK------LGVDVYSVST-D--- 73 (186)
T ss_dssp TCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH------TTEEEEEEES-S---
T ss_pred CCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH------CCCEEEEEEC-C---
Confidence 44556544 33 47 8999999999999999995 9999999999 9999999975 3699999995 2
Q ss_pred CCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEccc
Q 014387 114 PWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 114 ~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~n 174 (425)
+....++|.+... .+-.++||.+.|.. ..+.+.|++. .+|+++|||++|+|+...
T Consensus 74 --~~~~~~~~~~~~~--~~~~~~fp~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~ 134 (186)
T 1n8j_A 74 --THFTHKAWHSSSE--TIAKIKYAMIGDPT--GALTRNFDNMREDEGLADRATFVVDPQGIIQAIE 134 (186)
T ss_dssp --CHHHHHHHHHHCT--TGGGCCSEEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred --CHHHHHHHHHHcC--cccCCceeEEECCc--hHHHHHhCCccCCCCceeeEEEEECCCCeEEEEE
Confidence 2333445543221 11134556566643 4678889987 379999999999998754
No 55
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.57 E-value=4.3e-15 Score=128.29 Aligned_cols=113 Identities=11% Similarity=0.154 Sum_probs=82.9
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCch
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTD 117 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D 117 (425)
+..+|. +...+|+.+++++++||+|+|+||++||++|+..+ |.++++++++ .++.|+.|++ +. + +.
T Consensus 5 G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~-~~--~-~~ 74 (153)
T 2l5o_A 5 SKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKN------KNFQVLAVAQ-PI--D-PI 74 (153)
T ss_dssp CTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGG------TTEEEEEEEC-TT--S-CH
T ss_pred CCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc------CCeEEEEEec-CC--C-CH
Confidence 344453 44578999999999999999999999999999988 9999999864 3699999985 21 0 22
Q ss_pred HHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 118 NKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 118 ~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
+..++|.+ ...++| |.+.|.. ..+.+.|++.++|+++|+|++|+++.
T Consensus 75 ~~~~~~~~-~~~~~~-----~~~~d~~--~~~~~~~~i~~~P~~~lid~~G~i~~ 121 (153)
T 2l5o_A 75 ESVRQYVK-DYGLPF-----TVMYDAD--KAVGQAFGTQVYPTSVLIGKKGEILK 121 (153)
T ss_dssp HHHHHHHH-HTTCCS-----EEEECSS--CHHHHHHTCCSSSEEEEECSSSCCCE
T ss_pred HHHHHHHH-HcCCCc-----eEEcCch--HHHHHHcCCCccCeEEEECCCCcEEE
Confidence 23333322 123443 3333432 36788999999999999999999875
No 56
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.57 E-value=4.2e-15 Score=135.84 Aligned_cols=118 Identities=15% Similarity=0.097 Sum_probs=87.3
Q ss_pred CCCCCcccC--C-CC--CeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCC
Q 014387 42 DDLLPLVDG--A-TK--TRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNM 113 (425)
Q Consensus 42 ~~~~pl~dg--~-~g--~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~ 113 (425)
++++|.|.. . +| +.+++++++||+|+|+|| |+||++|+.++ |.++|+++++ .+++||.|++ |
T Consensus 8 G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-d--- 77 (197)
T 1qmv_A 8 GKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK------LGCEVLGVSV-D--- 77 (197)
T ss_dssp TSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S---
T ss_pred CCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C---
Confidence 445665543 3 56 899999999999999999 99999999999 9999999964 3699999996 2
Q ss_pred CCchHHHHHHHHHH-hCCCceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEcc
Q 014387 114 PWTDNKQKQFQSLQ-SAMPWYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCP 173 (425)
Q Consensus 114 ~w~D~~~~~F~~~~-~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~ 173 (425)
...+..+|.+.. ....-..++||.+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 78 --~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~--~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~ 140 (197)
T 1qmv_A 78 --SQFTHLAWINTPRKEGGLGPLNIPLLADVT--RRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI 140 (197)
T ss_dssp --CHHHHHHHHTSCGGGTCCCSCSSCEEECTT--CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred --CHHHHHHHHHHHHhhCCCCCCceEEEECCc--HHHHHHcCCccCCCCceeeEEEEECCCCcEEEE
Confidence 233334443321 11100134566666753 4688899998 79999999999999875
No 57
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.57 E-value=3.7e-15 Score=135.46 Aligned_cols=119 Identities=16% Similarity=0.125 Sum_probs=88.0
Q ss_pred CCCCCccc--CC--CC--CeEecccc-CCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCC
Q 014387 42 DDLLPLVD--GA--TK--TRVNLEVL-RRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDP 111 (425)
Q Consensus 42 ~~~~pl~d--g~--~g--~~V~ls~L-kGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~ 111 (425)
++++|.|. +. +| +.++++++ +||+|+|+|| |+||++|+.++ |.++|+++++ .+++||.|++ |
T Consensus 3 G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~Is~-d- 74 (192)
T 2h01_A 3 QGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE------RNVELLGCSV-D- 74 (192)
T ss_dssp SSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH------TTEEEEEEES-S-
T ss_pred CCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEe-C-
Confidence 34455443 34 68 89999999 9999999999 99999999999 9999999974 3699999995 2
Q ss_pred CCCCchHHHHHHHHHH-hCCCceeeccCcccChHHHHHHHHhCCCC-----CCCeEEEECCCCcEEccc
Q 014387 112 NMPWTDNKQKQFQSLQ-SAMPWYTVYHPSLIDRAVIQFIKEEWQFG-----KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 112 s~~w~D~~~~~F~~~~-~~mPW~aV~~p~l~D~~~~~~L~~~f~v~-----~iPtlVvLD~~GkVv~~n 174 (425)
+....+.|.+.. .......++||.+.|.. ..+.+.|++. .+|+++|||++|+|+...
T Consensus 75 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~ 137 (192)
T 2h01_A 75 ----SKFTHLAWKKTPLSQGGIGNIKHTLISDIS--KSIARSYDVLFNESVALRAFVLIDKQGVVQHLL 137 (192)
T ss_dssp ----CHHHHHHHHTSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTEECCEEEEECTTSBEEEEE
T ss_pred ----CHHHHHHHHHhHHhhCCccCCCcCeEECCc--HHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEE
Confidence 233334443321 11122234566666653 4688999999 899999999999998753
No 58
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.57 E-value=4.3e-15 Score=136.50 Aligned_cols=119 Identities=15% Similarity=0.112 Sum_probs=88.8
Q ss_pred CCCCCcccC--C--CC--CeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC
Q 014387 42 DDLLPLVDG--A--TK--TRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN 112 (425)
Q Consensus 42 ~~~~pl~dg--~--~g--~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s 112 (425)
++++|.|.. . +| +.+++++++||+|+|+|| |+||++|+.++ |.++|+++++ .+++||.|++ |
T Consensus 9 G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~------~~v~vi~Is~-D-- 79 (202)
T 1uul_A 9 LHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD------IGCEVLACSM-D-- 79 (202)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S--
T ss_pred CCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH------CCCEEEEEeC-C--
Confidence 445665443 2 56 899999999999999999 99999999999 9999999964 3699999996 2
Q ss_pred CCCchHHHHHHHHHH-hCCCceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEccc
Q 014387 113 MPWTDNKQKQFQSLQ-SAMPWYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~-~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~n 174 (425)
+.....+|.+.. ....+..++||.+.|.. ..+.+.|++. ++|+++|||++|+|+...
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~--~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~ 143 (202)
T 1uul_A 80 ---SEYSHLAWTSIERKRGGLGQMNIPILADKT--KCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQIT 143 (202)
T ss_dssp ---CHHHHHHHHHSCGGGTCCCSCSSCEEECTT--CHHHHHHTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred ---CHHHHHHHHHHHHhhCCCCCCceeEEECCc--hHHHHHcCCccCCCCceeeEEEEECCCCEEEEEE
Confidence 233344443321 11122245667666753 4788899999 999999999999998753
No 59
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.56 E-value=7e-15 Score=123.17 Aligned_cols=104 Identities=15% Similarity=0.124 Sum_probs=78.0
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+...+|+.+++++++||+|+|+||++||++|+..+ |.+++++++ +++++.|++. .+.+...+
T Consensus 10 ~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~--------~~~~~~~~ 73 (136)
T 1zzo_A 10 AKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--------EVTFVGVAGL--------DQVPAMQE 73 (136)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECS--------SCHHHHHH
T ss_pred cccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--------CeEEEEEeCC--------CCHHHHHH
Confidence 44567899999999999999999999999999998 888888762 5899999852 22233333
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
+......- +||.+.|.. ..+.+.|++.++|+++++|++|+++
T Consensus 74 ~~~~~~~~--~~~~~~d~~--~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 74 FVNKYPVK--TFTQLADTD--GSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp HHHHTTCT--TSEEEECTT--CHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred HHHHcCCC--ceEEEEcCC--cHHHHHcCCCCCceEEEECCCCCEE
Confidence 33222110 333334432 3678899999999999999999997
No 60
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.56 E-value=7.9e-15 Score=132.13 Aligned_cols=120 Identities=15% Similarity=0.110 Sum_probs=78.9
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCC--CCCC
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDP--NMPW 115 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~--s~~w 115 (425)
+..+|. +...+|+.+++++++||+|+|+|||+|||+|+.++ |.++|+++++ ++++||.|++.+. ....
T Consensus 24 g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~e~~ 97 (183)
T 2obi_A 24 ARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE------CGLRILAFPCNQFGKQEPG 97 (183)
T ss_dssp CCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCS
T ss_pred cCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc------CCeEEEEEECCCCCCCCCC
Confidence 334454 44578999999999999999999999999999999 9999999964 2699999996210 0001
Q ss_pred chHHHHHHHHHHhCCCceeeccCccc--ChHH------HHHHHHhC---C-----CCCCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLI--DRAV------IQFIKEEW---Q-----FGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~--D~~~------~~~L~~~f---~-----v~~iPtlVvLD~~GkVv~~ 173 (425)
+.+..++| .... .++||.+. |..+ .+.+.... + ++.+|+++|||++|+|+..
T Consensus 98 ~~~~~~~~---~~~~---~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 98 SNEEIKEF---AAGY---NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp CHHHHHHH---HHTT---TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEE
T ss_pred CHHHHHHH---HHHc---CCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEE
Confidence 22233333 3222 22344432 2211 12222221 3 4557999999999999874
No 61
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.56 E-value=2.8e-14 Score=128.41 Aligned_cols=123 Identities=20% Similarity=0.285 Sum_probs=79.6
Q ss_pred CCCCCCcc--cCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC--CC
Q 014387 41 KDDLLPLV--DGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN--MP 114 (425)
Q Consensus 41 k~~~~pl~--dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s--~~ 114 (425)
.+..+|.| .+.+|+.+++++++||+|+|+|||+|||||+.++ |.++|+++++ ++++||.|++.+-. ..
T Consensus 14 ~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~~~vi~is~d~~~~~~~ 87 (180)
T 3kij_A 14 KINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP------SHFSVLAFPCNQFGESEP 87 (180)
T ss_dssp CCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT------TSEEEEEEECCCSTTCCC
T ss_pred CcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc------CCeEEEEEECCccccCCC
Confidence 34445544 4578999999999999999999999999999999 9999999964 36999999963200 00
Q ss_pred CchHHHHHHHH--HHhCCCceeeccCcccCh---HHHHHHHHhCCCCCCCe----EEEECCCCcEEcc
Q 014387 115 WTDNKQKQFQS--LQSAMPWYTVYHPSLIDR---AVIQFIKEEWQFGKKPI----LVVLDPHGKVVCP 173 (425)
Q Consensus 115 w~D~~~~~F~~--~~~~mPW~aV~~p~l~D~---~~~~~L~~~f~v~~iPt----lVvLD~~GkVv~~ 173 (425)
-+.+..++|.+ +....|.+.-.. ..+. ...+.+... +.++|+ ++|||++|+|+..
T Consensus 88 d~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~~~--~~~~p~~~~~~~lid~~G~i~~~ 151 (180)
T 3kij_A 88 RPSKEVESFARKNYGVTFPIFHKIK--ILGSEGEPAFRFLVDS--SKKEPRWNFWKYLVNPEGQVVKF 151 (180)
T ss_dssp SCHHHHHHHHHHHHCCCSCBBCCCC--CSSTTCCHHHHHHHHH--HTCCCSSTTCEEEECTTSCEEEE
T ss_pred CCHHHHHHHHHHhcCCCCceeeeee--ccCccccHHHHHHHhc--CCCCccccceEEEECCCCCEEEE
Confidence 02333444533 222333221000 0111 122333332 247898 9999999999865
No 62
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.56 E-value=1e-14 Score=128.74 Aligned_cols=114 Identities=18% Similarity=0.247 Sum_probs=79.3
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCCh-HhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDIS-QEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQ 124 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~-pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~ 124 (425)
+.+.+|+.+++++++||+|+|+|||+||+ +|+.++ |.++|+++++ + +.+++||.|++ |.. ..+.+...
T Consensus 18 l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~---~-~~~~~vv~is~-d~~----~d~~~~~~ 88 (174)
T 1xzo_A 18 FQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKA---E-NIDVRIISFSV-DPE----NDKPKQLK 88 (174)
T ss_dssp EECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHH---T-TCCCEEEEEES-CTT----TCCHHHHH
T ss_pred EEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhh---c-CCcEEEEEEEe-CCC----CCCHHHHH
Confidence 45678999999999999999999999999 999988 9999999975 2 23699999996 210 01223344
Q ss_pred HHHhCCCceeecc---CcccC--hHHHHHHHH------------hCCCCCCCeEEEECCCCcEEcc
Q 014387 125 SLQSAMPWYTVYH---PSLID--RAVIQFIKE------------EWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 125 ~~~~~mPW~aV~~---p~l~D--~~~~~~L~~------------~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
++..... ++| |.+.| ....+.+.. .|++..+|+++|||++|+|+..
T Consensus 89 ~~~~~~~---~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 89 KFAANYP---LSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp HHHTTSC---CCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEE
T ss_pred HHHHHcC---CCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEE
Confidence 4443322 233 32334 222222221 2567889999999999999864
No 63
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.56 E-value=8e-15 Score=133.26 Aligned_cols=114 Identities=16% Similarity=0.152 Sum_probs=78.9
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCC--CCCCchHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDP--NMPWTDNKQKQF 123 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~--s~~w~D~~~~~F 123 (425)
+...+|+.+++++++||+|+|+|||+|||+|+.++ |.++|+++++ ++++||.|++.+. ....+.+..++|
T Consensus 33 l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~~~~~~~~~~~~ 106 (190)
T 2vup_A 33 VLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKS------QGFTVLAFPCNQFGGQEPGNEEEIKEF 106 (190)
T ss_dssp CBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTCEEEEEECCCSTTCCCSCHHHHHHH
T ss_pred EEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhc------CCeEEEEEEcCccCCCCCCCHHHHHHH
Confidence 34567899999999999999999999999999999 9999999964 2699999996310 000123334444
Q ss_pred H-HHHhCCCceeeccCccc--ChH------HHHHH-HHhCCCCCCC------eEEEECCCCcEEcc
Q 014387 124 Q-SLQSAMPWYTVYHPSLI--DRA------VIQFI-KEEWQFGKKP------ILVVLDPHGKVVCP 173 (425)
Q Consensus 124 ~-~~~~~mPW~aV~~p~l~--D~~------~~~~L-~~~f~v~~iP------tlVvLD~~GkVv~~ 173 (425)
. +. ..+ +||.+. |.. ..+.+ .+.|++.++| +++|||++|+|+..
T Consensus 107 ~~~~-~~~-----~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 107 VCTK-FKA-----EFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp HHHH-HCC-----CSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred HHHh-cCC-----CeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEE
Confidence 3 21 122 233332 211 11122 3457899999 99999999999875
No 64
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.56 E-value=6.2e-15 Score=132.63 Aligned_cols=108 Identities=13% Similarity=0.087 Sum_probs=78.7
Q ss_pred CCCCCcc--cCCCC--CeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 42 DDLLPLV--DGATK--TRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 42 ~~~~pl~--dg~~g--~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
++++|.| ...+| +.+++++++||+|+|+|||+||++|+.++ |.++|++ +++||.|++.|
T Consensus 33 G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----------~v~vv~vs~~d----- 97 (176)
T 3kh7_A 33 GKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----------GVVIYGINYKD----- 97 (176)
T ss_dssp TSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----------TCEEEEEEESC-----
T ss_pred CCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----------CCEEEEEeCCC-----
Confidence 4445543 44566 88999999999999999999999999998 8887753 48999998622
Q ss_pred chHHHHHHHHHHh--CCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSLQS--AMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~~~--~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
+.+...++.. ..+|..+ +.|.. ..+.+.|++.++|+++|||++|+|+..
T Consensus 98 ---~~~~~~~~~~~~~~~~~~~----~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 148 (176)
T 3kh7_A 98 ---DNAAAIKWLNELHNPYLLS----ISDAD--GTLGLDLGVYGAPETYLIDKQGIIRHK 148 (176)
T ss_dssp ---CHHHHHHHHHHTTCCCSEE----EEETT--CHHHHHHTCCSSCEEEEECTTCBEEEE
T ss_pred ---CHHHHHHHHHHcCCCCceE----EECCc--chHHHHcCCCCCCeEEEECCCCeEEEE
Confidence 2233333333 3333321 23432 367889999999999999999999864
No 65
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.56 E-value=3.7e-15 Score=134.71 Aligned_cols=117 Identities=14% Similarity=0.089 Sum_probs=86.1
Q ss_pred CCCCCccc--CCCCC----eEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC
Q 014387 42 DDLLPLVD--GATKT----RVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN 112 (425)
Q Consensus 42 ~~~~pl~d--g~~g~----~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s 112 (425)
++.+|.|. +.+|+ .+++++++||+|+|+|| |+||++|+.++ |.++|+++++ .+++||.|++ |
T Consensus 4 G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~vs~-d-- 74 (187)
T 1we0_A 4 GTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKK------LGVEVYSVST-D-- 74 (187)
T ss_dssp TCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHH------TTEEEEEEES-S--
T ss_pred CCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHH------cCCEEEEEEC-C--
Confidence 44455443 34577 99999999999999999 99999999999 9999999975 2699999996 2
Q ss_pred CCCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEccc
Q 014387 113 MPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~n 174 (425)
.....++|.+... .+..++||.+.|.. ..+.+.|++. ++|+++|||++|+|+...
T Consensus 75 ---~~~~~~~~~~~~~--~~~~~~~~~~~d~~--~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~ 135 (187)
T 1we0_A 75 ---THFVHKAWHENSP--AVGSIEYIMIGDPS--QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIE 135 (187)
T ss_dssp ---CHHHHHHHHHSCH--HHHTCCSEEEECTT--CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred ---CHHHHHHHHHHhc--cccCCCceEEECCc--hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEE
Confidence 2333444543221 01123444455542 4678899998 999999999999998753
No 66
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.56 E-value=7.4e-15 Score=130.11 Aligned_cols=112 Identities=13% Similarity=0.085 Sum_probs=82.8
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEec-CCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISD-LDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsA-sWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
++..|. +.+.+|+.+++++++||+|+|+||+ +||++|+.++ |.++|+++ . +++||.||. | +
T Consensus 19 G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~-------~v~vv~is~-d-----~ 84 (163)
T 1psq_A 19 GDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D-------NTVVLTVSM-D-----L 84 (163)
T ss_dssp TSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-------TEEEEEEES-S-----C
T ss_pred CCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C-------CcEEEEEEC-C-----C
Confidence 444554 4457899999999999999999995 9999999999 99988877 2 699999995 2 2
Q ss_pred hHHHHHHHHHHhCCCceeeccCcccC-hHHHHHHHHhCCCC----CC--CeEEEECCCCcEEccc
Q 014387 117 DNKQKQFQSLQSAMPWYTVYHPSLID-RAVIQFIKEEWQFG----KK--PILVVLDPHGKVVCPN 174 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV~~p~l~D-~~~~~~L~~~f~v~----~i--PtlVvLD~~GkVv~~n 174 (425)
....++|.+. ...+ +||.+.| . ...+.+.|++. ++ |+++|||++|+|+...
T Consensus 85 ~~~~~~~~~~-~~~~----~~~~l~D~~--~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 142 (163)
T 1psq_A 85 PFAQKRWCGA-EGLD----NAIMLSDYF--DHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVE 142 (163)
T ss_dssp HHHHHHHHHH-HTCT----TSEEEECTT--TCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEE
T ss_pred HHHHHHHHHh-cCCC----CcEEecCCc--hhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEE
Confidence 3344555442 2330 3444456 3 23677889987 44 9999999999998754
No 67
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.56 E-value=1.9e-14 Score=132.34 Aligned_cols=114 Identities=11% Similarity=0.146 Sum_probs=81.7
Q ss_pred ccCCCCCeEeccccCCCEEEEEEecCCChH-hHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHH
Q 014387 48 VDGATKTRVNLEVLRRKMVLLLISDLDISQ-EEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQ 124 (425)
Q Consensus 48 ~dg~~g~~V~ls~LkGK~VlL~FsAsWC~p-Cr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~ 124 (425)
+.+.+|+.+++++++||+|+|+|||+||+| |+.++ |.++|+++++ +.+.+++||+|++ |+. .| ..+...
T Consensus 26 l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~---~~~~~v~vv~Is~-D~~---~d-~~~~~~ 97 (200)
T 2b7k_A 26 LEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSS---KYGITLQPLFITC-DPA---RD-SPAVLK 97 (200)
T ss_dssp EEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHH---HHCCCCEEEEEES-CTT---TC-CHHHHH
T ss_pred EEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHH---hhCCceEEEEEEC-CCC---CC-CHHHHH
Confidence 445789999999999999999999999998 99999 9999999975 2134799999996 311 01 223344
Q ss_pred HHHh--CCCceeeccCcccChHHHHHHHHhCCCC-CCC---------------eEEEECCCCcEEcc
Q 014387 125 SLQS--AMPWYTVYHPSLIDRAVIQFIKEEWQFG-KKP---------------ILVVLDPHGKVVCP 173 (425)
Q Consensus 125 ~~~~--~mPW~aV~~p~l~D~~~~~~L~~~f~v~-~iP---------------tlVvLD~~GkVv~~ 173 (425)
++.. ..+|..++. +.+....+.+.|++. ++| +++|||++|+|+..
T Consensus 98 ~~~~~~~~~~~~l~~----~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 98 EYLSDFHPSILGLTG----TFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDA 160 (200)
T ss_dssp HHHTTSCTTCEEEEC----CHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEE
T ss_pred HHHHHcCCCceEEeC----CHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEE
Confidence 4443 345655542 233456788889987 454 88999999999864
No 68
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.33 E-value=2.7e-16 Score=137.47 Aligned_cols=115 Identities=17% Similarity=0.224 Sum_probs=85.3
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHH-HHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQ-LYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~-iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
++..|. +.+.+|+.+++++++||+|+|+|||+||++|+.++ |.+ +|++++. ..+++||.|++
T Consensus 10 g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~-----~~~~~vv~v~~-------- 76 (159)
T 2ls5_A 10 GEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKD-----NADFALIGIDR-------- 76 (159)
Confidence 334453 34467899999999999999999999999999998 888 9988852 24789999985
Q ss_pred hHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCC--CCCCCeEEEECCCCcEEccc
Q 014387 117 DNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQ--FGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~--v~~iPtlVvLD~~GkVv~~n 174 (425)
|...+...++.... .++||.+.|.. ..+.+.|+ +.++|+++|||++|+|+...
T Consensus 77 d~~~~~~~~~~~~~---~~~~~~~~d~~--~~~~~~~~~~~~~~P~~~lid~~G~i~~~~ 131 (159)
T 2ls5_A 77 DEPLEKVLAFAKST---GVTYPLGLDPG--ADIFAKYALRDAGITRNVLIDREGKIVKLT 131 (159)
Confidence 22323333333332 23666666653 47888999 56799999999999998643
No 69
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.56 E-value=3.4e-14 Score=124.71 Aligned_cols=120 Identities=19% Similarity=0.317 Sum_probs=79.6
Q ss_pred CCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC--CCCc
Q 014387 43 DLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN--MPWT 116 (425)
Q Consensus 43 ~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s--~~w~ 116 (425)
..+|. +...+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ ++++||.|++.+-. ...+
T Consensus 10 ~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 10 ESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKD------QGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCTTTTCCCSC
T ss_pred ccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhcc------CCEEEEEEECCCCCCCCCCC
Confidence 34443 44578999999999999999999999999999999 9999999964 26999999962100 0002
Q ss_pred hHHHHHHHHHHhCCCceeeccCcc--cChHH------HHHHH-HhCCC--CCCC---eEEEECCCCcEEcc
Q 014387 117 DNKQKQFQSLQSAMPWYTVYHPSL--IDRAV------IQFIK-EEWQF--GKKP---ILVVLDPHGKVVCP 173 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV~~p~l--~D~~~------~~~L~-~~f~v--~~iP---tlVvLD~~GkVv~~ 173 (425)
.+..++|.+-...+ +||.+ .|..+ .+.+. +.+++ .++| +++|||++|+|+..
T Consensus 84 ~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 84 NDQITDFVCTRFKS-----EFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp HHHHHHHHHHHTCC-----CSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHHHHHHhcCC-----CceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEe
Confidence 23334443311122 33333 22211 11121 33466 7889 99999999999875
No 70
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.56 E-value=4.7e-15 Score=135.34 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=81.6
Q ss_pred CeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCC
Q 014387 54 TRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAM 130 (425)
Q Consensus 54 ~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~m 130 (425)
+.+++++++||+|+|+|| |+||++|+.++ |.++|+++++ .+++||.|++ | ..+..++|.+...
T Consensus 36 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Vs~-d-----~~~~~~~~~~~~~-- 101 (195)
T 2bmx_A 36 TTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED------RDAQILGVSI-D-----SEFAHFQWRAQHN-- 101 (195)
T ss_dssp EEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHHHCT--
T ss_pred cEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHHhc--
Confidence 899999999999999999 99999999999 9999999964 3799999996 2 2333444533221
Q ss_pred CceeeccCcccChHHHHHHHHhCCCC-----CCCeEEEECCCCcEEccc
Q 014387 131 PWYTVYHPSLIDRAVIQFIKEEWQFG-----KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 131 PW~aV~~p~l~D~~~~~~L~~~f~v~-----~iPtlVvLD~~GkVv~~n 174 (425)
.+..++||.+.|.. ..+.+.|++. ++|+++|||++|+|+...
T Consensus 102 ~~~~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~ 148 (195)
T 2bmx_A 102 DLKTLPFPMLSDIK--RELSQAAGVLNADGVADRVTFIVDPNNEIQFVS 148 (195)
T ss_dssp TGGGCCSCEEECTT--SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEE
T ss_pred cccCCceeEEeCCc--hHHHHHhCCcccCCCccceEEEEcCCCeEEEEE
Confidence 11234566566643 4678899999 999999999999998754
No 71
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.56 E-value=2.9e-14 Score=133.22 Aligned_cols=119 Identities=10% Similarity=0.001 Sum_probs=76.4
Q ss_pred ccCCC-CCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCC--CCCCchHHHHH
Q 014387 48 VDGAT-KTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDP--NMPWTDNKQKQ 122 (425)
Q Consensus 48 ~dg~~-g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~--s~~w~D~~~~~ 122 (425)
+.+.+ |+.+++++|+||+|+|+|||+||||| .++ |.++|+++++ ++++||.||..+- ....+.+..+.
T Consensus 22 l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~------~g~~vlgvs~d~f~~~e~~~~~~i~~ 94 (207)
T 2r37_A 22 ALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAP------FGLVILGFPCNQFGKQEPGENSEILP 94 (207)
T ss_dssp EEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGG------GTEEEEEEECCCBTTCCCSCHHHHHH
T ss_pred eeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhcc------CCEEEEEEECcccCcCCCCCHHHHHH
Confidence 44567 89999999999999999999999999 677 9999999975 3699999995310 00011233344
Q ss_pred HHHHHhCCCceeeccCcccCh--------HHHHHHHHhCC---------------------CCCCCeEEEECCCCcEEcc
Q 014387 123 FQSLQSAMPWYTVYHPSLIDR--------AVIQFIKEEWQ---------------------FGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 123 F~~~~~~mPW~aV~~p~l~D~--------~~~~~L~~~f~---------------------v~~iPtlVvLD~~GkVv~~ 173 (425)
|.++...-.=+.++||.+.|. +....+..... +...|+++|||++|+|+..
T Consensus 95 f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~ 174 (207)
T 2r37_A 95 TLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMR 174 (207)
T ss_dssp HHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred HHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEE
Confidence 543210000123455554321 11233443221 2233899999999999875
No 72
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.55 E-value=2e-14 Score=124.42 Aligned_cols=113 Identities=14% Similarity=0.134 Sum_probs=86.7
Q ss_pred CCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchH
Q 014387 43 DLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDN 118 (425)
Q Consensus 43 ~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~ 118 (425)
..+|. +...+|+.+++++++ |+|+|+|||+||++|+..+ |.++++++ +++|+.|++. .+.
T Consensus 9 ~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---------~v~~v~v~~d------~~~ 72 (154)
T 3ia1_A 9 EPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---------GVPFYVISRE------PRD 72 (154)
T ss_dssp EECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---------CCCEEEEECC------TTC
T ss_pred CcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---------CCeEEEEeCC------Ccc
Confidence 34453 455689999999999 9999999999999999999 99999987 3789999962 133
Q ss_pred HHHHHHHHHhCCCceeeccCcccCh-HHHHHHHHhCCCCCCCeEEEECCCCcEEccc
Q 014387 119 KQKQFQSLQSAMPWYTVYHPSLIDR-AVIQFIKEEWQFGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 119 ~~~~F~~~~~~mPW~aV~~p~l~D~-~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~n 174 (425)
+.+...++...... +||.+.|. .....+.+.|++.++|+++|||++|+++...
T Consensus 73 ~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (154)
T 3ia1_A 73 TREVVLEYMKTYPR---FIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALF 126 (154)
T ss_dssp CHHHHHHHHTTCTT---EEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEE
T ss_pred cHHHHHHHHHHcCC---CcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEE
Confidence 45556666655443 55555551 1235788999999999999999999998643
No 73
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.55 E-value=1.4e-14 Score=128.74 Aligned_cols=115 Identities=14% Similarity=0.131 Sum_probs=86.1
Q ss_pred CCCCCCccc----CCCC--CeEeccc-cCCCEEEEEEe-cCCChHhH-HHH--HHHHHHHHHhhhccCCCceE-EEEEec
Q 014387 41 KDDLLPLVD----GATK--TRVNLEV-LRRKMVLLLIS-DLDISQEE-VII--LEQLYSEARQHQTRHESQYE-VVWLPI 108 (425)
Q Consensus 41 k~~~~pl~d----g~~g--~~V~ls~-LkGK~VlL~Fs-AsWC~pCr-~~~--L~~iY~~~k~~~~k~~~~fE-IV~IsI 108 (425)
.++++|.|. +.+| +.+++++ ++||+|+|+|| |+|||+|+ .++ |.++|+++++ .+++ ||.||.
T Consensus 6 ~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~------~~v~~vv~Is~ 79 (162)
T 1tp9_A 6 VGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKS------KGVTEILCISV 79 (162)
T ss_dssp TTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH------TTCCCEEEEES
T ss_pred CCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEEC
Confidence 355667654 5678 9999999 99999999999 89999999 788 9999999975 3699 999995
Q ss_pred cCCCCCCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC------C-----CCeEEEECCCCcEEccc
Q 014387 109 VDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG------K-----KPILVVLDPHGKVVCPN 174 (425)
Q Consensus 109 vd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~-----iPtlVvLD~~GkVv~~n 174 (425)
| +....++|.+ +...-. +||.+.|.. ..+.+.|++. + +|+++||| +|+|+...
T Consensus 80 -d-----~~~~~~~~~~---~~~~~~-~~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~ 143 (162)
T 1tp9_A 80 -N-----DPFVMKAWAK---SYPENK-HVKFLADGS--ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAAN 143 (162)
T ss_dssp -S-----CHHHHHHHHH---TCTTCS-SEEEEECTT--SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEE
T ss_pred -C-----CHHHHHHHHH---hcCCCC-CeEEEECCC--chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEE
Confidence 2 2333444533 222100 455566754 4788899986 3 89999999 99998653
No 74
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.54 E-value=5.6e-15 Score=133.71 Aligned_cols=120 Identities=14% Similarity=0.111 Sum_probs=78.4
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccC--CCCCC
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVD--PNMPW 115 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd--~s~~w 115 (425)
+.++|. +...+|+.+++++++||+|+|+|||+|||+|+.++ |.++|+++++ ++++||.|++.+ ....+
T Consensus 26 g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~is~d~~~~~~~~ 99 (185)
T 2gs3_A 26 ARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAE------CGLRILAFPCNQFGKQEPG 99 (185)
T ss_dssp CCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCTTTTCCCS
T ss_pred CCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhc------CCeEEEEEECcccCCCCCC
Confidence 334453 44578999999999999999999999999999999 9999999964 269999999621 00111
Q ss_pred chHHHHHHHHHHhCCCceeeccCccc--ChH------HHHHHHHhC---C-----CCCCCeEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLI--DRA------VIQFIKEEW---Q-----FGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~--D~~------~~~~L~~~f---~-----v~~iPtlVvLD~~GkVv~~ 173 (425)
+.+..++|.+ ...++ ||.+. |.. ..+.+...+ + ++.+|+++|||++|+|+..
T Consensus 100 ~~~~~~~~~~-~~~~~-----~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 167 (185)
T 2gs3_A 100 SNEEIKEFAA-GYNVK-----FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 167 (185)
T ss_dssp CHHHHHHHHH-HTTCC-----SEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEE
T ss_pred CHHHHHHHHH-HcCCC-----CeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEe
Confidence 2233344432 12333 33332 211 112222211 3 3447999999999999865
No 75
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.54 E-value=2e-15 Score=136.20 Aligned_cols=120 Identities=15% Similarity=0.120 Sum_probs=77.8
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC-CC-C
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN-MP-W 115 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s-~~-w 115 (425)
+..+|. +...+|+.+++++++||+|+|+|||+|||+|+.++ |.++|+++++ ++++||.|++.+.. .+ -
T Consensus 26 g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~v~vv~vs~d~~~~~e~~ 99 (181)
T 2p31_A 26 EQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGP------HHFNVLAFPCNQFGQQEPD 99 (181)
T ss_dssp -CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCS
T ss_pred CCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhc------CCEEEEEEECcCCCCCCCC
Confidence 334453 44578999999999999999999999999999999 9999999964 26999999963100 00 0
Q ss_pred chHHHHHHHHHHhCCCceeeccCccc--ChHHH--HHHHHhCCCCCCC-------eEEEECCCCcEEcc
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLI--DRAVI--QFIKEEWQFGKKP-------ILVVLDPHGKVVCP 173 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~--D~~~~--~~L~~~f~v~~iP-------tlVvLD~~GkVv~~ 173 (425)
+.+..+.|.+-... ++||.+. |..+. ..+. .|.+.++| +++|||++|+|+..
T Consensus 100 ~~~~~~~~~~~~~~-----~~~p~~~~~d~~g~~~~~~~-~~~~~~~P~~~~~~~~~~lid~~G~i~~~ 162 (181)
T 2p31_A 100 SNKEIESFARRTYS-----VSFPMFSKIAVTGTGAHPAF-KYLAQTSGKEPTWNFWKYLVAPDGKVVGA 162 (181)
T ss_dssp CHHHHHHHHHHHHC-----CCSCBBCCCCCSSTTSCHHH-HHHHHHHSCCCCSTTCEEEECTTSCEEEE
T ss_pred CHHHHHHHHHhhcC-----CCceeEeecccCCccchhhh-hhhhhcCCCccccceeEEEEcCCCCEEEE
Confidence 12233444331112 2344432 21110 0011 23355678 99999999999865
No 76
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.54 E-value=1.3e-14 Score=146.51 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=88.2
Q ss_pred CCCCCccc-------CCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC
Q 014387 42 DDLLPLVD-------GATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN 112 (425)
Q Consensus 42 ~~~~pl~d-------g~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s 112 (425)
+.++|.|. ..+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ ++++||.|++.+..
T Consensus 54 G~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~------~~v~vi~Vs~d~~~ 127 (352)
T 2hyx_A 54 CGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD------SGLAVIGVHTPEYA 127 (352)
T ss_dssp CCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEECCSSG
T ss_pred CCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc------CCeEEEEEECCccc
Confidence 44567665 457889999999999999999999999999999 9999999964 26999999852100
Q ss_pred CCCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 113 MPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
.+.+.+...++..+. .++||.+.|.. ..+.+.|++.++|+++|||++|+|+..
T Consensus 128 ---~~d~~~~~~~~~~~~---~l~fpv~~D~~--~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 128 ---FEKVPGNVAKGAANL---GISYPIALDNN--YATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp ---GGGCHHHHHHHHHHH---TCCSCEEECTT--SHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred ---ccCCHHHHHHHHHHc---CCCccEEeCCc--HHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 122334444443332 23455555653 467889999999999999999999875
No 77
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.53 E-value=1.1e-14 Score=129.50 Aligned_cols=112 Identities=19% Similarity=0.159 Sum_probs=83.6
Q ss_pred CCCCCCcc--cCCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 41 KDDLLPLV--DGATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 41 k~~~~pl~--dg~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
.++++|.| .+.+|+.+++++++||+|+|+|| ++||++|+.++ |.++|++ + +++||.||. |
T Consensus 22 ~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--------~~~vv~is~-d----- 86 (166)
T 3p7x_A 22 EGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--------EGIVLTISA-D----- 86 (166)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--------TSEEEEEES-S-----
T ss_pred CCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--------CCEEEEEEC-C-----
Confidence 34455644 45789999999999999999999 78999999999 8888876 2 599999995 2
Q ss_pred chHHHHHHHHHHhCCCceeeccCcccCh-HHHHHHHHhCCCCC------CCeEEEECCCCcEEccc
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLIDR-AVIQFIKEEWQFGK------KPILVVLDPHGKVVCPN 174 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~D~-~~~~~L~~~f~v~~------iPtlVvLD~~GkVv~~n 174 (425)
+....++|.+- ..++ +||.+.|. . ..+.+.|++.. .|+++|||++|+|+...
T Consensus 87 ~~~~~~~~~~~-~~~~----~~~~l~D~~~--~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 145 (166)
T 3p7x_A 87 LPFAQKRWCAS-AGLD----NVITLSDHRD--LSFGENYGVVMEELRLLARAVFVLDADNKVVYKE 145 (166)
T ss_dssp CHHHHHHHHHH-HTCS----SCEEEECTTT--CHHHHHHTCEETTTTEECCEEEEECTTCBEEEEE
T ss_pred CHHHHHHHHHH-cCCC----ceEEccCCch--hHHHHHhCCccccCCceeeEEEEECCCCeEEEEE
Confidence 34445556442 2331 34445565 3 26788899875 89999999999998754
No 78
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.53 E-value=9.9e-16 Score=137.38 Aligned_cols=113 Identities=15% Similarity=0.154 Sum_probs=86.7
Q ss_pred CCCCCCcc--cCCCCCeEecccc--CCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCC
Q 014387 41 KDDLLPLV--DGATKTRVNLEVL--RRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNM 113 (425)
Q Consensus 41 k~~~~pl~--dg~~g~~V~ls~L--kGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~ 113 (425)
-+++.|.| .+.+|+.++++++ +||+|+|+|| |+|||+|+.++ |.++|+++++ .+++||.||. |
T Consensus 7 vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~------~~v~vv~is~-d--- 76 (164)
T 4gqc_A 7 LGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEK------ANAEVLAISV-D--- 76 (164)
T ss_dssp TTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGG------SSSEEEEEES-S---
T ss_pred CCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhc------cCceEEEecC-C---
Confidence 35556654 4578999999998 8999999988 99999999999 9999999964 3799999995 2
Q ss_pred CCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC----------CCCeEEEECCCCcEEcc
Q 014387 114 PWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG----------KKPILVVLDPHGKVVCP 173 (425)
Q Consensus 114 ~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~----------~iPtlVvLD~~GkVv~~ 173 (425)
+....++|.+- . .++||.+.|+. ..+.+.|++. ..|+++|||++|+|+..
T Consensus 77 --~~~~~~~~~~~-~-----~~~fp~l~D~~--~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~ 136 (164)
T 4gqc_A 77 --SPWCLKKFKDE-N-----RLAFNLLSDYN--REVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYK 136 (164)
T ss_dssp --CHHHHHHHHHH-T-----TCCSEEEECTT--SHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEE
T ss_pred --CHHHHHHHHHh-c-----CcccceeecCc--hHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEE
Confidence 23444556442 2 34566667764 4688899984 37999999999999754
No 79
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.53 E-value=2.2e-14 Score=133.95 Aligned_cols=120 Identities=18% Similarity=0.144 Sum_probs=87.8
Q ss_pred CCCCCCccc--CC--CC--CeEecccc-CCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccC
Q 014387 41 KDDLLPLVD--GA--TK--TRVNLEVL-RRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVD 110 (425)
Q Consensus 41 k~~~~pl~d--g~--~g--~~V~ls~L-kGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd 110 (425)
.++++|.|. +. +| +.++++++ +||+|+|+|| |+||++|+.++ |.++|+++++ .+++||.|++ |
T Consensus 23 ~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-D 95 (213)
T 2i81_A 23 VGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE------RNVELLGCSV-D 95 (213)
T ss_dssp BTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S
T ss_pred CCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEeC-C
Confidence 345566544 34 68 89999999 9999999999 99999999999 9999999974 3699999995 2
Q ss_pred CCCCCchHHHHHHHHHHhCC-CceeeccCcccChHHHHHHHHhCCCC-----CCCeEEEECCCCcEEccc
Q 014387 111 PNMPWTDNKQKQFQSLQSAM-PWYTVYHPSLIDRAVIQFIKEEWQFG-----KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 111 ~s~~w~D~~~~~F~~~~~~m-PW~aV~~p~l~D~~~~~~L~~~f~v~-----~iPtlVvLD~~GkVv~~n 174 (425)
+....++|.+..... .--.++||.+.|.. ..+.+.|++. .+|+++|||++|+|+...
T Consensus 96 -----~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~ 158 (213)
T 2i81_A 96 -----SKYTHLAWKKTPLAKGGIGNIKHTLLSDIT--KSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLL 158 (213)
T ss_dssp -----CHHHHHHHHSSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred -----CHHHHHHHHHHHHhhCCccCCCceEEECCc--hHHHHHhCCccccCCcccEEEEECCCCEEEEEE
Confidence 233334443211100 00023455566642 4788999999 899999999999998753
No 80
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.52 E-value=7.8e-14 Score=125.54 Aligned_cols=123 Identities=16% Similarity=0.201 Sum_probs=82.6
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCCCh-HhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLDIS-QEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsWC~-pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
+.++|. +.+.+|+.|++++|+||+|+|+||++||| +|...+ |.++++.+++ .+.++++|+||+ |+..+ +
T Consensus 9 ~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~----~~~~v~~v~isv-Dp~~D-t 82 (170)
T 4hde_A 9 NWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKE----EKLDVQFVSFSV-DPDLD-K 82 (170)
T ss_dssp CBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHH----TTCCCEEEEEES-CTTTC-C
T ss_pred CCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhc----ccccceeEeeec-Ccccc-c
Confidence 334554 45678999999999999999999999997 899998 9999999975 245799999997 42111 2
Q ss_pred hHHHHHHHHHH-hC-CCceeeccCcccChHHHHHHHHhC----------CCCCCCeEEEECCCCcEEc
Q 014387 117 DNKQKQFQSLQ-SA-MPWYTVYHPSLIDRAVIQFIKEEW----------QFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 117 D~~~~~F~~~~-~~-mPW~aV~~p~l~D~~~~~~L~~~f----------~v~~iPtlVvLD~~GkVv~ 172 (425)
-+..++|.+.+ .. ..|..+..+.. ....+.....| .+...|+++|||++|+|+.
T Consensus 83 p~~l~~y~~~~~~~~~~~~~ltg~~~--~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~ 148 (170)
T 4hde_A 83 PENLKAFIQKFTEDTSNWNLLTGYSL--EDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMK 148 (170)
T ss_dssp HHHHHHHHTTTCSCCTTEEEEBCSCH--HHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEE
T ss_pred HHHHHHHHHHcCCCCCCceecCcccH--HHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEE
Confidence 23334453322 12 34766654321 11222333333 3344689999999999974
No 81
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.52 E-value=1.1e-14 Score=140.42 Aligned_cols=119 Identities=15% Similarity=0.076 Sum_probs=89.1
Q ss_pred CCCCCCccc-----CCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC
Q 014387 41 KDDLLPLVD-----GATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN 112 (425)
Q Consensus 41 k~~~~pl~d-----g~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s 112 (425)
.++++|.|. +.+|+.+++++|+||+|+|+|| |+||++|..++ |.++|+++++ .+++||.||+ |
T Consensus 64 vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~------~gv~vv~IS~-D-- 134 (254)
T 3tjj_A 64 ISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS------INTEVVACSV-D-- 134 (254)
T ss_dssp TTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHT------TTEEEEEEES-S--
T ss_pred CCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEcC-C--
Confidence 355667665 4467899999999999999999 99999999999 9999999974 3699999995 2
Q ss_pred CCCchHHHHHHHHHH-hCCCceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEcc
Q 014387 113 MPWTDNKQKQFQSLQ-SAMPWYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCP 173 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~-~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~ 173 (425)
+......|.+.. ...--..++||.+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 135 ---~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~ 197 (254)
T 3tjj_A 135 ---SQFTHLAWINTPRRQGGLGPIRIPLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 197 (254)
T ss_dssp ---CHHHHHHHHTSCGGGTSCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred ---CHHHHHHHHHHHHHhcCCcccccceeeCcH--HHHHHHcCCccccCCCccceEEEECCCCeEEEE
Confidence 234444553321 11000035667677764 4788899985 58999999999999875
No 82
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.51 E-value=3.6e-14 Score=124.75 Aligned_cols=115 Identities=13% Similarity=0.276 Sum_probs=80.0
Q ss_pred cccCCCCCeEeccccCCCEEEEEEecCCChH-hHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHH
Q 014387 47 LVDGATKTRVNLEVLRRKMVLLLISDLDISQ-EEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQF 123 (425)
Q Consensus 47 l~dg~~g~~V~ls~LkGK~VlL~FsAsWC~p-Cr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F 123 (425)
.+.+.+| .+++++++||+|+|+|||+||+| |+.++ |.++|+++++ ++..+++||+|++ |...+ +.+..+.|
T Consensus 20 ~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~---~~~~~v~vv~is~-d~~~d-~~~~~~~~ 93 (172)
T 2k6v_A 20 ALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPP---KAQERVQVIFVSV-DPERD-PPEVADRY 93 (172)
T ss_dssp EEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCH---HHHTTEEEEEEES-CTTTC-CHHHHHHH
T ss_pred EEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhh---hccCCEEEEEEEE-CCCCC-CHHHHHHH
Confidence 3455778 99999999999999999999998 99999 9999998864 1113699999996 31110 12233444
Q ss_pred HHHHhCCCceeeccCcccChH-HHHHHHHhCC---------------CCCCCeEEEECCCCcEEccc
Q 014387 124 QSLQSAMPWYTVYHPSLIDRA-VIQFIKEEWQ---------------FGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 124 ~~~~~~mPW~aV~~p~l~D~~-~~~~L~~~f~---------------v~~iPtlVvLD~~GkVv~~n 174 (425)
.+- ...+|..+. |.. ....+.+.|+ +.++|+++||| +|+|+...
T Consensus 94 ~~~-~~~~~~~l~-----d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~ 153 (172)
T 2k6v_A 94 AKA-FHPSFLGLS-----GSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLY 153 (172)
T ss_dssp HHH-HCTTEEEEC-----CCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEE
T ss_pred HHH-hCCCcEEEe-----CCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEE
Confidence 332 234554433 432 2346666666 46899999999 99998653
No 83
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.51 E-value=3.3e-14 Score=128.09 Aligned_cols=113 Identities=13% Similarity=0.076 Sum_probs=84.0
Q ss_pred CCCCCcc--c-CCCCCeEecccc-CCCEEEEEEe-cCCChHhHH-HH--HHHHHHHHHhhhccCCCce-EEEEEeccCCC
Q 014387 42 DDLLPLV--D-GATKTRVNLEVL-RRKMVLLLIS-DLDISQEEV-II--LEQLYSEARQHQTRHESQY-EVVWLPIVDPN 112 (425)
Q Consensus 42 ~~~~pl~--d-g~~g~~V~ls~L-kGK~VlL~Fs-AsWC~pCr~-~~--L~~iY~~~k~~~~k~~~~f-EIV~IsIvd~s 112 (425)
++++|.| . +.+|+.++++++ +||+|+|+|| |+|||+|+. ++ |.++|+++++ +++ +||.||. |
T Consensus 6 G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~------~gv~~vv~Is~-d-- 76 (167)
T 2wfc_A 6 GDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHG------KGVDIIACMAV-N-- 76 (167)
T ss_dssp TCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHH------TTCCEEEEEES-S--
T ss_pred CCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C--
Confidence 4555644 3 567999999998 9999888885 999999999 99 9999999975 369 9999995 2
Q ss_pred CCCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCC-----------CCeEEEECCCCcEEcc
Q 014387 113 MPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGK-----------KPILVVLDPHGKVVCP 173 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~-----------iPtlVvLD~~GkVv~~ 173 (425)
+....++|.+- ..++. .||.+.|.. ..+.+.|++.. .|+++|| ++|+|+..
T Consensus 77 ---~~~~~~~~~~~-~~~~~---~fp~l~D~~--~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~ 138 (167)
T 2wfc_A 77 ---DSFVMDAWGKA-HGADD---KVQMLADPG--GAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKV 138 (167)
T ss_dssp ---CHHHHHHHHHH-TTCTT---TSEEEECTT--SHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEE
T ss_pred ---CHHHHHHHHHh-cCCCc---ceEEEECCC--CcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEE
Confidence 23334455432 22330 166666753 46888999864 4999999 99999875
No 84
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.50 E-value=2.7e-14 Score=127.29 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=81.4
Q ss_pred CCCCCcc--cCCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 42 DDLLPLV--DGATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 42 ~~~~pl~--dg~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
++++|.| .+.+|+.+++++++||+|+|+|| |+|||+|+.++ |.++|+++ . +++||+|++ | +
T Consensus 24 g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~-------~v~vv~Is~-d-----~ 89 (171)
T 2yzh_A 24 GDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E-------GVDVTVVSM-D-----L 89 (171)
T ss_dssp TSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-------TEEEEEEES-S-----C
T ss_pred CCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C-------CceEEEEeC-C-----C
Confidence 4456644 45789999999999999999999 89999999999 99998877 2 699999995 2 2
Q ss_pred hHHHHHHHHHHhCCCceeeccCcccC-hHHHHHHHHhCCCC-------C--CCeEEEECCCCcEEccc
Q 014387 117 DNKQKQFQSLQSAMPWYTVYHPSLID-RAVIQFIKEEWQFG-------K--KPILVVLDPHGKVVCPN 174 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV~~p~l~D-~~~~~~L~~~f~v~-------~--iPtlVvLD~~GkVv~~n 174 (425)
.+..++|.+. ...+ +||.+.| .. ..+ +.|++. + .|+++|||++|+|+...
T Consensus 90 ~~~~~~~~~~-~~~~----~~~~l~D~~~--~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 149 (171)
T 2yzh_A 90 PFAQKRFCES-FNIQ----NVTVASDFRY--RDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQ 149 (171)
T ss_dssp HHHHHHHHHH-TTCC----SSEEEECTTT--CGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHH-cCCC----CeEEeecCcc--CcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEE
Confidence 3334455432 2230 3444456 32 356 888875 2 69999999999998654
No 85
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.50 E-value=1.4e-14 Score=128.80 Aligned_cols=113 Identities=15% Similarity=0.151 Sum_probs=82.3
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
++..|. +.+.+|+.+++++++||+|+|+|| |+||++|+.++ |.++|+++ . +++||.||. | +
T Consensus 20 G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~-------~v~vv~Is~-d-----~ 85 (165)
T 1q98_A 20 GEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S-------NTIVLCISA-D-----L 85 (165)
T ss_dssp TCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T-------TEEEEEEES-S-----C
T ss_pred CCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C-------CCEEEEEeC-C-----C
Confidence 445564 445789999999999999999999 89999999999 99999887 2 599999995 2 1
Q ss_pred hHHHHHHHHHHhCCCceee-ccCcccChHHHHHHHHhCCCCC---------CCeEEEECCCCcEEcccc
Q 014387 117 DNKQKQFQSLQSAMPWYTV-YHPSLIDRAVIQFIKEEWQFGK---------KPILVVLDPHGKVVCPNA 175 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV-~~p~l~D~~~~~~L~~~f~v~~---------iPtlVvLD~~GkVv~~na 175 (425)
....++| .... .+ +||.+.|. ....+.+.|++.. +|+++|||++|+|+....
T Consensus 86 ~~~~~~~---~~~~---~~~~~~~l~D~-~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 86 PFAQARF---CGAE---GIENAKTVSTF-RNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp HHHHTTC---TTTT---TCTTEEEEECT-TCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred HHHHHHH---HHHc---CCCceEEeecc-ccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEe
Confidence 2222223 2221 23 35555564 1246778899853 599999999999987543
No 86
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.50 E-value=1.2e-14 Score=134.36 Aligned_cols=114 Identities=19% Similarity=0.136 Sum_probs=83.5
Q ss_pred CCCCCCcc--cCCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 41 KDDLLPLV--DGATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 41 k~~~~pl~--dg~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
.++++|.| .+.+|+.+++++++||+|+|+|| ++||++|+.++ |.++|+++ . +++||.||. |
T Consensus 54 ~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~-------~v~vv~Is~-D----- 119 (200)
T 3zrd_A 54 IGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E-------NTVVLCISS-D----- 119 (200)
T ss_dssp TTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T-------TEEEEEEES-S-----
T ss_pred CCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C-------CCEEEEEEC-C-----
Confidence 34456644 45789999999999999999999 67999999999 99999987 2 599999995 2
Q ss_pred chHHHHHHHHHHhCCCceee-ccCcccChHHHHHHHHhCCCC-------C--CCeEEEECCCCcEEcccc
Q 014387 116 TDNKQKQFQSLQSAMPWYTV-YHPSLIDRAVIQFIKEEWQFG-------K--KPILVVLDPHGKVVCPNA 175 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV-~~p~l~D~~~~~~L~~~f~v~-------~--iPtlVvLD~~GkVv~~na 175 (425)
+.+..++| ... +.+ +||.+.|.. ...+.+.|++. + .|+++|||++|+|+....
T Consensus 120 ~~~~~~~~---~~~---~~~~~f~~l~D~~-~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~ 182 (200)
T 3zrd_A 120 LPFAQSRF---CGA---EGLSNVITLSTLR-GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSEL 182 (200)
T ss_dssp CHHHHTTC---TTT---TTCTTEEEEETTS-CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred CHHHHHHH---HHH---cCCCCceEEecCc-hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEe
Confidence 22222223 222 234 455555651 24678889985 3 699999999999986543
No 87
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.50 E-value=3.6e-14 Score=122.56 Aligned_cols=99 Identities=16% Similarity=0.189 Sum_probs=72.8
Q ss_pred CeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCC
Q 014387 54 TRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMP 131 (425)
Q Consensus 54 ~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mP 131 (425)
+.+++++++||+|+|+|||+||++|+.++ |.+++++ .+++++.|++.+ +....+.|... ..++
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---------~~v~~v~v~~~~-----~~~~~~~~~~~-~~~~ 97 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---------KRFQLVGINYKD-----AADNARRFLGR-YGNP 97 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---------TTSEEEEEEESC-----CHHHHHHHHHH-HCCC
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---------CCeEEEEEECCC-----CHHHHHHHHHH-cCCC
Confidence 89999999999999999999999999987 7776653 258999998622 23333334221 2344
Q ss_pred ceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 132 WYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 132 W~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
|..+. .|. ...+.+.|++.++|+++++|++|+++..
T Consensus 98 ~~~~~----~d~--~~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 98 FGRVG----VDA--NGRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp CSEEE----EET--TSHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred Cceee----eCc--hhHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 43222 233 2367889999999999999999999864
No 88
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.49 E-value=2.4e-14 Score=125.92 Aligned_cols=111 Identities=18% Similarity=0.208 Sum_probs=83.3
Q ss_pred CCCCCc--ccCCCCCeEeccccCCC--EEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCC
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRK--MVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMP 114 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK--~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~ 114 (425)
++..|. +.+.+|+.+++++++|| +|+|+|| |+|||+|+.++ |.++|+++++ .+ +||.|+. |
T Consensus 10 G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~------~~-~vv~is~-d---- 77 (159)
T 2a4v_A 10 GDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKE------YA-AVFGLSA-D---- 77 (159)
T ss_dssp TCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTT------TC-EEEEEES-C----
T ss_pred CCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHh------CC-cEEEEeC-C----
Confidence 444554 44578999999999997 8999997 99999999999 9999999964 25 9999995 2
Q ss_pred CchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCC------eEEEECCCCcEEccc
Q 014387 115 WTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKP------ILVVLDPHGKVVCPN 174 (425)
Q Consensus 115 w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iP------tlVvLD~~GkVv~~n 174 (425)
+....++|.+- ..+ +||.+.|.. ..+.+.|++...| +++|| ++|+|+...
T Consensus 78 -~~~~~~~~~~~-~~~-----~~~~l~D~~--~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~ 133 (159)
T 2a4v_A 78 -SVTSQKKFQSK-QNL-----PYHLLSDPK--REFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKR 133 (159)
T ss_dssp -CHHHHHHHHHH-HTC-----SSEEEECTT--CHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEE
T ss_pred -CHHHHHHHHHH-hCC-----CceEEECCc--cHHHHHhCCcccccCCccceEEEE-cCCEEEEEE
Confidence 23334455432 223 455555643 4678899999988 88999 999998754
No 89
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.49 E-value=1.8e-14 Score=127.29 Aligned_cols=111 Identities=17% Similarity=0.127 Sum_probs=82.1
Q ss_pred CCCCCcc--cCCCCCeEeccccCCCEEEEEEecCC-ChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 42 DDLLPLV--DGATKTRVNLEVLRRKMVLLLISDLD-ISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 42 ~~~~pl~--dg~~g~~V~ls~LkGK~VlL~FsAsW-C~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
++..|.| .+.+|+.+++++++||+|+|+|||+| |++|+.++ |.++|+++ . +++||.|++ | +
T Consensus 21 G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~-------~~~vv~is~-d-----~ 86 (167)
T 2jsy_A 21 GDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G-------DVNVYTISA-D-----L 86 (167)
T ss_dssp TSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S-------SCEEEEEEC-S-----S
T ss_pred CCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C-------CCEEEEEEC-C-----C
Confidence 4445544 45789999999999999999999999 99999999 99999998 3 599999996 2 1
Q ss_pred hHHHHHHHHHHhCCCceee-ccCcccC-hHHHHHHHHhCCCCC------CCeEEEECCCCcEEccc
Q 014387 117 DNKQKQFQSLQSAMPWYTV-YHPSLID-RAVIQFIKEEWQFGK------KPILVVLDPHGKVVCPN 174 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV-~~p~l~D-~~~~~~L~~~f~v~~------iPtlVvLD~~GkVv~~n 174 (425)
.+..++| .... .+ +||.+.| . ...+.+.|++.. .|+++|||++|+|+...
T Consensus 87 ~~~~~~~---~~~~---~~~~~~~~~d~~--~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~ 144 (167)
T 2jsy_A 87 PFAQARW---CGAN---GIDKVETLSDHR--DMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAE 144 (167)
T ss_dssp GGGTSCC---GGGS---SCTTEEEEEGGG--TCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEE
T ss_pred HHHHHHH---HHhc---CCCCceEeeCCc--hhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEE
Confidence 2222222 2222 22 3444455 3 236778899986 49999999999998754
No 90
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.48 E-value=5.8e-14 Score=123.67 Aligned_cols=110 Identities=18% Similarity=0.151 Sum_probs=77.6
Q ss_pred CCCCCcc--cCC--CCCeEecccc-CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCC
Q 014387 42 DDLLPLV--DGA--TKTRVNLEVL-RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMP 114 (425)
Q Consensus 42 ~~~~pl~--dg~--~g~~V~ls~L-kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~ 114 (425)
+++.|.| ... +|+.++++.+ +||+|+|+|||+|||+|+.++ |.+++++ +++|+.|++.+
T Consensus 25 G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----------~v~vv~v~~~~---- 90 (168)
T 2b1k_A 25 GKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----------GIRVVGMNYKD---- 90 (168)
T ss_dssp TSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----------TCCEEEEEESC----
T ss_pred CCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----------CCEEEEEECCC----
Confidence 4455544 344 7889999885 999999999999999999988 7776643 48899998622
Q ss_pred CchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 115 WTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 115 w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
+......|.+. ...+|..+ +.|.. ..+.+.|++.++|++++||++|+++..
T Consensus 91 -~~~~~~~~~~~-~~~~~~~~----~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 141 (168)
T 2b1k_A 91 -DRQKAISWLKE-LGNPYALS----LFDGD--GMLGLDLGVYGAPETFLIDGNGIIRYR 141 (168)
T ss_dssp -CHHHHHHHHHH-HCCCCSEE----EEETT--CHHHHHHTCCSSSEEEEECTTSBEEEE
T ss_pred -ChHHHHHHHHH-cCCCCcee----eECcc--hHHHHHcCccccCEEEEECCCCeEEEE
Confidence 22333344321 23444321 12332 367889999999999999999999854
No 91
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.48 E-value=3.1e-14 Score=127.94 Aligned_cols=110 Identities=17% Similarity=0.146 Sum_probs=81.0
Q ss_pred CCCCCc--ccCCCCCeEeccccCCCEEEEEEecCC-ChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCc
Q 014387 42 DDLLPL--VDGATKTRVNLEVLRRKMVLLLISDLD-ISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWT 116 (425)
Q Consensus 42 ~~~~pl--~dg~~g~~V~ls~LkGK~VlL~FsAsW-C~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~ 116 (425)
++++|. +.+.+|+.+++++++||+|+|+|||+| |++|+.++ |.++|++ + +++||.|++ | +
T Consensus 21 G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--------~v~vv~Is~-D-----~ 85 (175)
T 1xvq_A 21 GSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--------GATVLCVSK-D-----L 85 (175)
T ss_dssp TSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--------TCEEEEEES-S-----C
T ss_pred CCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--------CCEEEEEEC-C-----C
Confidence 445554 445789999999999999999999999 99999999 9999987 2 589999996 2 2
Q ss_pred hHHHHHHHHHHhCCCceee-ccCcccChHHHHHHHHhCCCCCC---------CeEEEECCCCcEEccc
Q 014387 117 DNKQKQFQSLQSAMPWYTV-YHPSLIDRAVIQFIKEEWQFGKK---------PILVVLDPHGKVVCPN 174 (425)
Q Consensus 117 D~~~~~F~~~~~~mPW~aV-~~p~l~D~~~~~~L~~~f~v~~i---------PtlVvLD~~GkVv~~n 174 (425)
....++| .... .+ +||.+.|.. ..+.+.|++..+ |+++|||++|+|+...
T Consensus 86 ~~~~~~~---~~~~---~~~~~~~l~D~~--~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 86 PFAQKRF---CGAE---GTENVMPASAFR--DSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp HHHHTTC---C---------CEEEEECTT--SSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred HHHHHHH---HHHc---CCCCceEeeCCH--HHHHHHhCCcccccccCCcccceEEEECCCCeEEEEE
Confidence 2222233 2221 22 445555643 467889999877 9999999999998754
No 92
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.46 E-value=1.6e-13 Score=129.51 Aligned_cols=118 Identities=13% Similarity=0.098 Sum_probs=85.6
Q ss_pred CCCCCccc--CCCCCeEeccccCCC--EEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 42 DDLLPLVD--GATKTRVNLEVLRRK--MVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 42 ~~~~pl~d--g~~g~~V~ls~LkGK--~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
++..|.|. ..+| .+++++++|| +|+++|||+|||+|..++ |.++|+++++ .+++||.||+ |
T Consensus 8 G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~------~~v~vi~IS~-D----- 74 (224)
T 1prx_A 8 GDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAK------RNVKLIALSI-D----- 74 (224)
T ss_dssp TCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHT------TTEEEEEEES-S-----
T ss_pred cCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH------CCCEEEEEcC-C-----
Confidence 44556543 4678 9999999998 677778999999999999 9999999964 3799999996 3
Q ss_pred chHHHHHHHHH-HhCCCc---eeeccCcccChHHHHHHHHhCCCC------------CCCeEEEECCCCcEEccc
Q 014387 116 TDNKQKQFQSL-QSAMPW---YTVYHPSLIDRAVIQFIKEEWQFG------------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 116 ~D~~~~~F~~~-~~~mPW---~aV~~p~l~D~~~~~~L~~~f~v~------------~iPtlVvLD~~GkVv~~n 174 (425)
+......|.+. .....- ..++||.+.|.. ..+.+.|++. .+|+++|||++|+|+...
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~ 147 (224)
T 1prx_A 75 SVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRN--RELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSI 147 (224)
T ss_dssp CHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTT--CHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEE
T ss_pred CHHHHHHHHHHHHHhhCcccccCcCcceeecCc--hHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEE
Confidence 23334455432 111100 245677777753 4688889973 379999999999998653
No 93
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.45 E-value=1.2e-13 Score=125.57 Aligned_cols=114 Identities=18% Similarity=0.130 Sum_probs=81.5
Q ss_pred CCCCCcc--c-CCCCCeEeccc-cCCCEE-EEEEecCCChHhHH-HH--HHHHHHHHHhhhccCCCceEEEE-EeccCCC
Q 014387 42 DDLLPLV--D-GATKTRVNLEV-LRRKMV-LLLISDLDISQEEV-II--LEQLYSEARQHQTRHESQYEVVW-LPIVDPN 112 (425)
Q Consensus 42 ~~~~pl~--d-g~~g~~V~ls~-LkGK~V-lL~FsAsWC~pCr~-~~--L~~iY~~~k~~~~k~~~~fEIV~-IsIvd~s 112 (425)
++++|.| . ..+|+.+++++ ++||.| +++|||+|||+|+. ++ |.++|+++++ .+++||. ||. |
T Consensus 18 G~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~------~gv~vv~~iS~-D-- 88 (173)
T 3mng_A 18 GDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKA------KGVQVVACLSV-N-- 88 (173)
T ss_dssp TCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHT------TTCCEEEEEES-S--
T ss_pred CCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHh------CCCEEEEEEcC-C--
Confidence 4456654 3 56799999999 599955 55567999999995 87 9999999974 3699997 885 2
Q ss_pred CCCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC-------------CCCeEEEECCCCcEEccc
Q 014387 113 MPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG-------------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 113 ~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~-------------~iPtlVvLD~~GkVv~~n 174 (425)
+....++|.+-. ..+ .+||.+.|.. ..+.+.|++. ..|+++||| +|+|+...
T Consensus 89 ---~~~~~~~f~~~~-~~~---~~fp~l~D~~--~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~ 153 (173)
T 3mng_A 89 ---DAFVTGEWGRAH-KAE---GKVRLLADPT--GAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALN 153 (173)
T ss_dssp ---CHHHHHHHHHHT-TCT---TTCEEEECTT--CHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred ---CHHHHHHHHHHh-CCC---CceEEEECCC--hHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEE
Confidence 233445554321 222 1266677764 4788888875 359999999 99998754
No 94
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.44 E-value=1.4e-13 Score=131.23 Aligned_cols=117 Identities=10% Similarity=0.116 Sum_probs=86.1
Q ss_pred CCCCCcc--cCCCCCeEeccccCCC-EEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 42 DDLLPLV--DGATKTRVNLEVLRRK-MVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 42 ~~~~pl~--dg~~g~~V~ls~LkGK-~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
++..|.| .+.+| .+++++++|| .|+|+|| |+|||+|..++ |.++|+++++ .+++||.||+ |
T Consensus 6 G~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~------~~v~vigIS~-D----- 72 (233)
T 2v2g_A 6 GEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKK------RGVKLIALSC-D----- 72 (233)
T ss_dssp TCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----
T ss_pred CCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH------cCCEEEEEcC-C-----
Confidence 4455644 34668 8999999998 9999998 99999999999 9999999975 3799999996 3
Q ss_pred chHHHHHHHHHHh---CCCceeeccCcccChHHHHHHHHhCCCC------------CCCeEEEECCCCcEEccc
Q 014387 116 TDNKQKQFQSLQS---AMPWYTVYHPSLIDRAVIQFIKEEWQFG------------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 116 ~D~~~~~F~~~~~---~mPW~aV~~p~l~D~~~~~~L~~~f~v~------------~iPtlVvLD~~GkVv~~n 174 (425)
+......|.+... ... ..++||.+.|.. +.+.+.|++. .+|+++|||++|+|+...
T Consensus 73 ~~~~~~~~~~~i~~~~~~~-~~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~ 143 (233)
T 2v2g_A 73 NVADHKEWSEDVKCLSGVK-GDMPYPIIADET--RELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSI 143 (233)
T ss_dssp CHHHHHHHHHHHHHHHTCC-SSCSSCEEECTT--CHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEE
T ss_pred CHHHHHHHHHHHHHhhCcc-cCCceEEEECCh--HHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEE
Confidence 2333445543211 110 034567667753 4688899984 589999999999998654
No 95
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.44 E-value=5.1e-13 Score=123.88 Aligned_cols=155 Identities=14% Similarity=0.128 Sum_probs=98.7
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.+||+|+|+|||+||+||+.+. |.++++++++ + +.++.++.|.. |..
T Consensus 30 ~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~---~-~~~~~~~~vd~--------~~~------------------- 78 (241)
T 3idv_A 30 ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKD---K-DPPIPVAKIDA--------TSA------------------- 78 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHT---S-SSCCCEEEEET--------TTC-------------------
T ss_pred hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhh---c-CCceEEEEEec--------cCC-------------------
Confidence 4789999999999999999999 9999999964 1 23466666652 111
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccccchhhhhcCCccCCCCchhHHHhhhh---cccc--eeccccCCC
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNALHMMWIWGSLAYPFSTAREEALWRE---ETWR--LELLVDGLD 213 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na~~~I~~~g~~aFPft~~~~~~L~~~---~~w~--~~ll~d~~d 213 (425)
..+.+.|+++++|++++++ +|+++...+. .+.....+...+ ..|. ...+..-.+
T Consensus 79 --------~~l~~~~~v~~~Pt~~~~~-~g~~~~~~g~------------~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 137 (241)
T 3idv_A 79 --------SVLASRFDVSGYPTIKILK-KGQAVDYEGS------------RTQEEIVAKVREVSQPDWTPPPEVTLVLTK 137 (241)
T ss_dssp --------HHHHHHTTCCSSSEEEEEE-TTEEEECCSC------------SCHHHHHHHHHHHHSTTCCCCCCSSEECCT
T ss_pred --------HHHHHhcCCCcCCEEEEEc-CCCcccccCc------------ccHHHHHHHHhhccCcccccccccceeccH
Confidence 1467789999999999995 6776632221 111111111111 0110 001110011
Q ss_pred ccccccccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc---CCCeeEEEeccCCChh
Q 014387 214 PVILNWMAEGRYICLYGGED-MDWIRKFTTATNAVAKTA---GIPLGMVYVGKSNPKD 267 (425)
Q Consensus 214 ~~i~~~~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~---~~~~Eiv~Vs~d~~~e 267 (425)
..+...+..++.+.++|.+. |++|+.+.+.+.++++.. +..+.++.|..+...+
T Consensus 138 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~ 195 (241)
T 3idv_A 138 ENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD 195 (241)
T ss_dssp TTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH
T ss_pred HHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH
Confidence 11222345678999999888 999999999999986543 3448888887775443
No 96
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.44 E-value=1.5e-13 Score=132.44 Aligned_cols=117 Identities=10% Similarity=0.110 Sum_probs=87.4
Q ss_pred CCCCCccc--CCCCCeEec-ccc--CCCE-EEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCC
Q 014387 42 DDLLPLVD--GATKTRVNL-EVL--RRKM-VLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNM 113 (425)
Q Consensus 42 ~~~~pl~d--g~~g~~V~l-s~L--kGK~-VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~ 113 (425)
+++.|.|. ..+| .+++ +++ +||. |+++|||+||++|..++ |.++|+++++ .+++||.||+ |
T Consensus 8 G~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~------~gv~VI~VS~-D--- 76 (249)
T 3a2v_A 8 GERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQR------LGVDLIGLSV-D--- 76 (249)
T ss_dssp TSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S---
T ss_pred CCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHh------CCcEEEEEEC-C---
Confidence 44566554 3456 7999 999 9995 56689999999999999 9999999975 3799999996 3
Q ss_pred CCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC-------CCCeEEEECCCCcEEcc
Q 014387 114 PWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG-------KKPILVVLDPHGKVVCP 173 (425)
Q Consensus 114 ~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~-------~iPtlVvLD~~GkVv~~ 173 (425)
+......|.+......-+.++||.+.|.. +.+.+.|++. .+|+++|||++|+|+..
T Consensus 77 --s~~~~~~w~~~~~~~~~~~i~fPil~D~~--~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~ 139 (249)
T 3a2v_A 77 --SVFSHIKWKEWIERHIGVRIPFPIIADPQ--GTVARRLGLLHAESATHTVRGVFIVDARGVIRTM 139 (249)
T ss_dssp --CHHHHHHHHHHHHHHTCCCCCSCEEECTT--SHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE
T ss_pred --CHHHHHHHHHHHHHhcCCCCceeEEECCc--hHHHHHhCCccccCCCcccceEEEECCCCeEEEE
Confidence 34444556442211111356788777753 4788899987 89999999999999865
No 97
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.43 E-value=2.4e-13 Score=124.90 Aligned_cols=134 Identities=11% Similarity=0.056 Sum_probs=91.8
Q ss_pred CCCCCCCcccC--C--CC-CeEeccc-cCCC-EEEEEEecCCChHhHH-HH--HHHHHHHHHhhhccCCCceE-EEEEec
Q 014387 40 PKDDLLPLVDG--A--TK-TRVNLEV-LRRK-MVLLLISDLDISQEEV-II--LEQLYSEARQHQTRHESQYE-VVWLPI 108 (425)
Q Consensus 40 ~k~~~~pl~dg--~--~g-~~V~ls~-LkGK-~VlL~FsAsWC~pCr~-~~--L~~iY~~~k~~~~k~~~~fE-IV~IsI 108 (425)
..++.+|.|.. . +| +.+++++ ++|| +|+++|||+|||+|+. ++ |+++|+++++ .+++ ||.||.
T Consensus 27 ~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~------~gv~~vv~Is~ 100 (184)
T 3uma_A 27 AVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILA------RGVDDIAVVAV 100 (184)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHT------TTCCEEEEEES
T ss_pred CCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHH------cCCCEEEEEEC
Confidence 44566675543 3 67 8999999 8999 5666678999999999 78 9999999975 3688 999995
Q ss_pred cCCCCCCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC-----------CCCeEEEECCCCcEEccccch
Q 014387 109 VDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG-----------KKPILVVLDPHGKVVCPNALH 177 (425)
Q Consensus 109 vd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~-----------~iPtlVvLD~~GkVv~~na~~ 177 (425)
| +....++|.+-. ..| -.||.+.|+. ..+.+.|++. ..|.++||| +|+|+....
T Consensus 101 -d-----~~~~~~~f~~~~-~~~---~~fp~l~D~~--~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~-- 165 (184)
T 3uma_A 101 -N-----DLHVMGAWATHS-GGM---GKIHFLSDWN--AAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNI-- 165 (184)
T ss_dssp -S-----CHHHHHHHHHHH-TCT---TTSEEEECTT--CHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEE--
T ss_pred -C-----CHHHHHHHHHHh-CCC---CceEEEEcCc--hHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEE--
Confidence 2 233445554321 222 0266677764 4788899985 368899996 999986443
Q ss_pred hhhhcCCccCCCCchhHHHhhh
Q 014387 178 MMWIWGSLAYPFSTAREEALWR 199 (425)
Q Consensus 178 ~I~~~g~~aFPft~~~~~~L~~ 199 (425)
|.+.=+++.+..+++++
T Consensus 166 -----~~~~g~~~~~~~~~vL~ 182 (184)
T 3uma_A 166 -----EESPGQATASGAAAMLE 182 (184)
T ss_dssp -----CSSTTCCSTTSHHHHHH
T ss_pred -----eCCCCCCcCCCHHHHHh
Confidence 22222455555665553
No 98
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.43 E-value=1.5e-13 Score=129.32 Aligned_cols=118 Identities=8% Similarity=0.061 Sum_probs=85.2
Q ss_pred CCCCCccc--CC--CCCeEeccccCCC--EEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCC
Q 014387 42 DDLLPLVD--GA--TKTRVNLEVLRRK--MVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNM 113 (425)
Q Consensus 42 ~~~~pl~d--g~--~g~~V~ls~LkGK--~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~ 113 (425)
++..|.|. +. +| .+++++++|| +|+++|||+|||+|..++ |.++|+++++ .+++||.||+ |
T Consensus 6 G~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~------~~v~vi~vS~-D--- 74 (220)
T 1xcc_A 6 GATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLK------LNCKLIGFSC-N--- 74 (220)
T ss_dssp TCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S---
T ss_pred CCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------cCCEEEEEeC-C---
Confidence 44455443 45 67 8999999998 666667999999999999 9999999964 3799999996 3
Q ss_pred CCchHHHHHHHHH-HhCCCceeeccCcccChHHHHHHHHhCCCC------------CCCeEEEECCCCcEEccc
Q 014387 114 PWTDNKQKQFQSL-QSAMPWYTVYHPSLIDRAVIQFIKEEWQFG------------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 114 ~w~D~~~~~F~~~-~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------------~iPtlVvLD~~GkVv~~n 174 (425)
+....+.|.+. ...+.=+.++||.+.|.. +.+.+.|++. .+|+++|||++|+|+...
T Consensus 75 --~~~~~~~~~~~i~~~~~~~~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~ 144 (220)
T 1xcc_A 75 --SKESHDKWIEDIKYYGKLNKWEIPIVCDES--RELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATV 144 (220)
T ss_dssp --CHHHHHHHHHHHHHHHTCSCCCCCEEECTT--SHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEE
T ss_pred --CHHHHHHHHHHHHHHhcCCCCcceeEECch--hHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEE
Confidence 23344555432 110001345677777753 4688889983 379999999999998654
No 99
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.41 E-value=2e-13 Score=123.14 Aligned_cols=102 Identities=9% Similarity=0.052 Sum_probs=75.5
Q ss_pred CeEecccc-CCC-EEEEEEecCCChHhHHH-H--HHHHHHHHHhhhccCCCceE-EEEEeccCCCCCCchHHHHHHHHHH
Q 014387 54 TRVNLEVL-RRK-MVLLLISDLDISQEEVI-I--LEQLYSEARQHQTRHESQYE-VVWLPIVDPNMPWTDNKQKQFQSLQ 127 (425)
Q Consensus 54 ~~V~ls~L-kGK-~VlL~FsAsWC~pCr~~-~--L~~iY~~~k~~~~k~~~~fE-IV~IsIvd~s~~w~D~~~~~F~~~~ 127 (425)
+.++++++ +|| +|+++|||+|||+|+.+ + |.++|+++++ .+++ ||.||. | +....++|.+-.
T Consensus 33 ~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~------~g~~~vv~Is~-d-----~~~~~~~~~~~~ 100 (171)
T 2pwj_A 33 STTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKA------KGVDSVICVAI-N-----DPYTVNAWAEKI 100 (171)
T ss_dssp CCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHH------TTCSEEEEEES-S-----CHHHHHHHHHHT
T ss_pred ceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHHHHHHHHHHh
Confidence 89999996 996 77889999999999999 8 9999999975 3689 999995 2 233345554321
Q ss_pred hCCCceeeccCcccChHHHHHHHHhCCCCC-----------CCeEEEECCCCcEEccc
Q 014387 128 SAMPWYTVYHPSLIDRAVIQFIKEEWQFGK-----------KPILVVLDPHGKVVCPN 174 (425)
Q Consensus 128 ~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~-----------iPtlVvLD~~GkVv~~n 174 (425)
.+ ..+||.+.|.. ..+.+.|++.. .|+.++|| +|+|+...
T Consensus 101 -~~---~~~fp~l~D~~--~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~ 151 (171)
T 2pwj_A 101 -QA---KDAIEFYGDFD--GSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALN 151 (171)
T ss_dssp -TC---TTTSEEEECTT--CHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEE
T ss_pred -CC---CCceEEEECCc--cHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEE
Confidence 11 12566667763 36778888752 57888899 99998643
No 100
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.35 E-value=2e-12 Score=122.40 Aligned_cols=117 Identities=14% Similarity=0.164 Sum_probs=90.9
Q ss_pred CCCCCccc-----CCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCC
Q 014387 42 DDLLPLVD-----GATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNM 113 (425)
Q Consensus 42 ~~~~pl~d-----g~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~ 113 (425)
+++.|.|. +.+++.|+|++++||.|+|+|+ +.|||.|..++ +.+.|+++++ .+.+|+.||. |
T Consensus 26 G~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~------~g~~vigiS~-D--- 95 (216)
T 3sbc_A 26 QKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEE------QGAQVLFAST-D--- 95 (216)
T ss_dssp TSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHH------TTEEEEEEES-S---
T ss_pred CCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhcc------CCceEEEeec-C---
Confidence 55667664 4567899999999999999999 99999999999 9999999975 3799999995 3
Q ss_pred CCchHHHHHHHHH-HhCCCceeeccCcccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEc
Q 014387 114 PWTDNKQKQFQSL-QSAMPWYTVYHPSLIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVC 172 (425)
Q Consensus 114 ~w~D~~~~~F~~~-~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~ 172 (425)
+......|.+. .....-..++||.+.|+. +.+.+.|++- ..+.++||||+|+|..
T Consensus 96 --s~~sh~aw~~~~~~~~~~~~l~fpllsD~~--~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~ 157 (216)
T 3sbc_A 96 --SEYSLLAWTNIPRKEGGLGPINIPLLADTN--HSLSRDYGVLIEEEGVALRGLFIIDPKGVIRH 157 (216)
T ss_dssp --CHHHHHHHHTSCGGGTCCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECTTSBEEE
T ss_pred --chhhHHHHHHHHHHhCCccCcccceEeCCC--CHHHHHcCCeeccCCceeeEEEEECCCCeEEE
Confidence 34556667542 222222357888888864 4888999983 3578999999999954
No 101
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.26 E-value=1.1e-11 Score=117.47 Aligned_cols=117 Identities=18% Similarity=0.165 Sum_probs=93.5
Q ss_pred CCCCCccc------CCCCCeEeccccCCCEEEEEEe-cCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCC
Q 014387 42 DDLLPLVD------GATKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPN 112 (425)
Q Consensus 42 ~~~~pl~d------g~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s 112 (425)
+++.|.|. +.+|++|+|++++||.|+|||+ +.|||.|..++ +.+.|.++++ .+.+|+.||. |
T Consensus 29 G~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~------~g~~vigiS~-D-- 99 (219)
T 3tue_A 29 NSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNE------LNCEVLACSI-D-- 99 (219)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHT------TTEEEEEEES-S--
T ss_pred CCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhcc------CCcEEEEeeC-C--
Confidence 55678775 4578899999999999999999 88999999999 9999999975 3799999995 3
Q ss_pred CCCchHHHHHHHH-HHhCCCceeeccCcccChHHHHHHHHhCCCC----CC--CeEEEECCCCcEEc
Q 014387 113 MPWTDNKQKQFQS-LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG----KK--PILVVLDPHGKVVC 172 (425)
Q Consensus 113 ~~w~D~~~~~F~~-~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~----~i--PtlVvLD~~GkVv~ 172 (425)
+-.....|.+ ...+..-+.++||.+.|+. +.+.+.|++- ++ -.++||||+|+|..
T Consensus 100 ---s~~sh~~w~~~~~~~~~~~~l~fpllsD~~--~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~ 161 (219)
T 3tue_A 100 ---SEYAHLQWTLQDRKKGGLGTMAIPILADKT--KNIARSYGVLEESQGVAYRGLFIIDPHGMLRQ 161 (219)
T ss_dssp ---CHHHHHHHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEE
T ss_pred ---chhhHHHHhhhhHHhcCccccccccccCcc--cHHHHHcCCcccCCCeeEEEEEEECCCCeEEE
Confidence 3556677754 3344455678899888874 4799999982 44 47999999999854
No 102
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.26 E-value=2.2e-11 Score=103.26 Aligned_cols=87 Identities=8% Similarity=0.159 Sum_probs=68.1
Q ss_pred CCCcccCCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHH
Q 014387 44 LLPLVDGATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQK 121 (425)
Q Consensus 44 ~~pl~dg~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~ 121 (425)
+.|.+...+++.++....+||+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ |..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-------~v~~~~vd~--------d~~-- 85 (128)
T 3ul3_B 23 KVPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-------RIYLLKVDL--------DKN-- 85 (128)
T ss_dssp ---CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-------GEEEEEEEG--------GGC--
T ss_pred cCCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-------CeEEEEEEC--------CCC--
Confidence 456666667777788888999999999999999999998 9999998853 577777763 221
Q ss_pred HHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 122 QFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 122 ~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 86 -------------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 111 (128)
T 3ul3_B 86 -------------------------ESLARKFSVKSLPTIILL-KNKTMLAR 111 (128)
T ss_dssp -------------------------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------------------------HHHHHHcCCCCcCEEEEE-ECCEEEEE
Confidence 146678999999999999 78988753
No 103
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.24 E-value=1.7e-11 Score=104.87 Aligned_cols=81 Identities=11% Similarity=0.099 Sum_probs=66.0
Q ss_pred CCCCCeEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHH
Q 014387 50 GATKTRVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQ 127 (425)
Q Consensus 50 g~~g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~ 127 (425)
..+|..++++.++||+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ |..
T Consensus 38 ~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-------~~~~~~v~~--------~~~-------- 94 (141)
T 3hxs_A 38 DYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-------KIYIYKVNV--------DKE-------- 94 (141)
T ss_dssp CCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-------TCEEEEEET--------TTC--------
T ss_pred ccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-------ceEEEEEEC--------CCC--------
Confidence 345678889999999999999999999999998 9889888742 477777764 211
Q ss_pred hCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 128 SAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 128 ~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++|++|+++.
T Consensus 95 -------------------~~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 95 -------------------PELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp -------------------HHHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred -------------------HHHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 13567899999999999999999863
No 104
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.24 E-value=4.8e-12 Score=111.56 Aligned_cols=91 Identities=14% Similarity=0.093 Sum_probs=66.2
Q ss_pred CCCeEeccccCCCEEEEEEe-cCCChHhHHHH--H---HHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 52 TKTRVNLEVLRRKMVLLLIS-DLDISQEEVII--L---EQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 52 ~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~--L---~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
.++.++++.++||+|+|+|| |+||+||+.+. | .++.+.+.. ++.++.|.+.+ ..
T Consensus 36 ~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-------~~~~v~vd~~~-------~~------ 95 (154)
T 2ju5_A 36 YAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-------HLHMVEVDFPQ-------KN------ 95 (154)
T ss_dssp HHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-------HCEEEEEECCS-------SC------
T ss_pred HHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-------cEEEEEecCcc-------cc------
Confidence 35567777789999999999 99999999998 6 566544422 57777776411 11
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
.++ ++. .| ....+.+.|++.++|+++++|++|+++..
T Consensus 96 ---~~~-----~~~-~~--~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 96 ---HQP-----EEQ-RQ--KNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp ---CCC-----HHH-HH--HHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred ---CCC-----hhh-Hh--hHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 122 221 22 24578899999999999999999999864
No 105
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.22 E-value=1.2e-11 Score=112.19 Aligned_cols=76 Identities=13% Similarity=0.214 Sum_probs=56.6
Q ss_pred eccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCcee
Q 014387 57 NLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYT 134 (425)
Q Consensus 57 ~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~a 134 (425)
.+++++||+|+|+|||+|||||+.++ |.++++++. +++|+.|++ |+..+...
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--------~v~~~~v~~--------d~~~~~~~---------- 101 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--------NIELAIISK--------GRAEDDLR---------- 101 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--------TEEEEEECH--------HHHHHHTT----------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CcEEEEEEC--------CCCHHHHH----------
Confidence 45678999999999999999999999 999887641 588888863 43322110
Q ss_pred eccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 135 VYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 135 V~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
.| . ..++.++||++++|++|+++.
T Consensus 102 -~~---~----------~~~v~~iPt~i~~~~~G~~~~ 125 (167)
T 1z6n_A 102 -QR---L----------ALERIAIPLVLVLDEEFNLLG 125 (167)
T ss_dssp -TT---T----------TCSSCCSSEEEEECTTCCEEE
T ss_pred -HH---H----------HcCCCCcCeEEEECCCCCEEE
Confidence 11 0 125899999999999999875
No 106
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.21 E-value=1.3e-11 Score=117.33 Aligned_cols=113 Identities=13% Similarity=0.125 Sum_probs=80.9
Q ss_pred CCCCCCcc--cCCCCCeEeccccCCCEEEEEEecCC-ChHhH-----HHH--HHHHHHHHHhhhccCCCceEEEEEeccC
Q 014387 41 KDDLLPLV--DGATKTRVNLEVLRRKMVLLLISDLD-ISQEE-----VII--LEQLYSEARQHQTRHESQYEVVWLPIVD 110 (425)
Q Consensus 41 k~~~~pl~--dg~~g~~V~ls~LkGK~VlL~FsAsW-C~pCr-----~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd 110 (425)
.++++|.| .+.+|+.+++++++||+|+|+||++| ||+|. .++ |.+. + .+++||.||. |
T Consensus 24 vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--------~gv~VvgIS~-D 91 (224)
T 3keb_A 24 KGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--------PHLKLIVITV-D 91 (224)
T ss_dssp TTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--------TTSEEEEEES-S
T ss_pred CCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--------CCCEEEEEEC-C
Confidence 35556654 35679999999999999999999999 99999 666 5544 2 2589999995 2
Q ss_pred CCCCCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCC---------CCeEEEECCCCcEEccccc
Q 014387 111 PNMPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGK---------KPILVVLDPHGKVVCPNAL 176 (425)
Q Consensus 111 ~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~---------iPtlVvLD~~GkVv~~na~ 176 (425)
+....+.|.+-. ..| +||.+.|.. ...+.+.|++.. +|+++|||++|+|+.....
T Consensus 92 -----s~~~~~~f~~~~-gl~----~fplLsD~~-~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~ 155 (224)
T 3keb_A 92 -----SPSSLARARHEH-GLP----NIALLSTLR-GRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERL 155 (224)
T ss_dssp -----CHHHHHHHHHHH-CCT----TCEEEESTT-CTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEEC
T ss_pred -----CHHHHHHHHHHc-CCC----CceEEEcCC-chHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEec
Confidence 233455564421 221 356666752 136788899864 7999999999999875543
No 107
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.20 E-value=4e-11 Score=119.30 Aligned_cols=104 Identities=14% Similarity=0.062 Sum_probs=78.3
Q ss_pred cccCCCCCeEeccccCCCEEEEEEe-cCCChHhHHHHHHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 47 LVDGATKTRVNLEVLRRKMVLLLIS-DLDISQEEVIILEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 47 l~dg~~g~~V~ls~LkGK~VlL~Fs-AsWC~pCr~~~L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
.+.+.+|+.+++++|+||+|+|+|| +.|||.|..++ ..+. +. ..++++||.||. | +....+.|.+
T Consensus 8 ~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~-~~~~-~~------~~~~~~v~gis~-D-----~~~~~~~f~~ 73 (322)
T 4eo3_A 8 ELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREA-VEFS-RE------NFEKAQVVGISR-D-----SVEALKRFKE 73 (322)
T ss_dssp EEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHH-HHHH-HS------CCTTEEEEEEES-C-----CHHHHHHHHH
T ss_pred EEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHH-HHHH-HH------hhCCCEEEEEeC-C-----CHHHHHHHHH
Confidence 3456789999999999999999999 57899999886 2221 11 234799999995 3 3445566754
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCC----CCCCeEEEECCCCcEEc
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQF----GKKPILVVLDPHGKVVC 172 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v----~~iPtlVvLD~~GkVv~ 172 (425)
- +.++||.+.|+. ..+.+.|++ ..+|+++|||++|+|+.
T Consensus 74 ~------~~l~fp~l~D~~--~~v~~~ygv~~~~~~~r~tfiId~~G~i~~ 116 (322)
T 4eo3_A 74 K------NDLKVTLLSDPE--GILHEFFNVLENGKTVRSTFLIDRWGFVRK 116 (322)
T ss_dssp H------HTCCSEEEECTT--CHHHHHTTCEETTEECCEEEEECTTSBEEE
T ss_pred h------hCCceEEEEcCc--hHHHHhcCCCCCCcCccEEEEECCCCEEEE
Confidence 2 245778788874 478999999 35899999999999964
No 108
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.19 E-value=2.3e-12 Score=114.54 Aligned_cols=103 Identities=12% Similarity=0.127 Sum_probs=62.9
Q ss_pred EeccccCCCEEEEEEecCCChHhHHHH--H---HHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCC
Q 014387 56 VNLEVLRRKMVLLLISDLDISQEEVII--L---EQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAM 130 (425)
Q Consensus 56 V~ls~LkGK~VlL~FsAsWC~pCr~~~--L---~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~m 130 (425)
+.++..+||+|+|+|||+||+||+.+. + .++.+.+++ ++.++.|++.+. +...+.+ .+....
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-------~~~~v~v~~d~~-----~~~~~~~-~~~~~~ 106 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-------DYVLITLYVDNK-----TPLTEPV-KIMENG 106 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-------HCEEEEEETTCC-----CEEEEEE-EEEETT
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-------CEEEEEEecCcc-----cccchhh-hhhhcc
Confidence 344446799999999999999999853 2 556666542 588888886221 1000000 001112
Q ss_pred CceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccc
Q 014387 131 PWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 131 PW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~n 174 (425)
.+..+.. +.+. ......+.|++.++|+++++|++|+++...
T Consensus 107 ~~~~~~~--~~~~-~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~ 147 (172)
T 3f9u_A 107 TERTLRT--VGDK-WSYLQRVKFGANAQPFYVLIDNEGNPLNKS 147 (172)
T ss_dssp EEEEEEE--HHHH-HHHHHHHHHSCCCSSEEEEECTTSCBSSCC
T ss_pred hhhhhhh--hhhh-hhHHHHHHcCCCCcceEEEECCCCCEEeec
Confidence 2222221 1221 112335889999999999999999998753
No 109
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.17 E-value=7.4e-11 Score=99.18 Aligned_cols=75 Identities=11% Similarity=0.138 Sum_probs=60.7
Q ss_pred ccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceee
Q 014387 58 LEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTV 135 (425)
Q Consensus 58 ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV 135 (425)
....+||+|+|+|||+||++|+.+. |.+++++++ .++.++.|++ |
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~------------------ 67 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-------GKFNIYYARL--------E------------------ 67 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-------SSCEEEEEET--------T------------------
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------C------------------
Confidence 4556899999999999999999988 888888773 3688888873 2
Q ss_pred ccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 136 YHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 136 ~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
.|. ...+.+.|++.++|+++++|++|+++.
T Consensus 68 -----~d~--~~~~~~~~~v~~~Pt~~~~~~~G~~~~ 97 (126)
T 2l57_A 68 -----EEK--NIDLAYKYDANIVPTTVFLDKEGNKFY 97 (126)
T ss_dssp -----SSH--HHHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred -----CCc--hHHHHHHcCCcceeEEEEECCCCCEEE
Confidence 011 135678899999999999999999875
No 110
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.14 E-value=6.5e-11 Score=101.43 Aligned_cols=80 Identities=11% Similarity=0.002 Sum_probs=61.7
Q ss_pred CCeEeccccCCCEEEEEEecCCChHhHHHH--H---HHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHH
Q 014387 53 KTRVNLEVLRRKMVLLLISDLDISQEEVII--L---EQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQ 127 (425)
Q Consensus 53 g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L---~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~ 127 (425)
+....++.++||+|+|+|||+||++|+.+. + .+++++++ ++.++.|.+ +...
T Consensus 21 ~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--------~~~~~~vd~--------~~~~------- 77 (134)
T 2fwh_A 21 ELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--------DTVLLQANV--------TAND------- 77 (134)
T ss_dssp HHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--------TSEEEEEEC--------TTCC-------
T ss_pred HHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--------CcEEEEEeC--------CCCc-------
Confidence 445667778899999999999999999976 5 67776652 488888875 1100
Q ss_pred hCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 128 SAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 128 ~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
+....+.+.|++.++|+++++|++|+++
T Consensus 78 ----------------~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 78 ----------------AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp ----------------HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred ----------------chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 1123577889999999999999999997
No 111
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.14 E-value=7.7e-11 Score=99.99 Aligned_cols=76 Identities=21% Similarity=0.236 Sum_probs=60.9
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HH--HHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeec
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LE--QLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVY 136 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~--~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~ 136 (425)
.+||+|+|+|||+||++|+.+. |. ++.+++++ ++.++.|.+ +.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-------~~~~~~vd~--------~~------------------ 73 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-------HFEVVKIDV--------GN------------------ 73 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-------HCEEEEEEC--------TT------------------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-------CEEEEEEeC--------Cc------------------
Confidence 4699999999999999999988 88 88888753 588888875 11
Q ss_pred cCcccChHHHHHHHHhCCC---CCCCeEEEECCCCcEEcccc
Q 014387 137 HPSLIDRAVIQFIKEEWQF---GKKPILVVLDPHGKVVCPNA 175 (425)
Q Consensus 137 ~p~l~D~~~~~~L~~~f~v---~~iPtlVvLD~~GkVv~~na 175 (425)
. |. ...+.+.|++ .++|+++++|++|+++....
T Consensus 74 ~----~~--~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~ 109 (133)
T 3fk8_A 74 F----DR--NLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTK 109 (133)
T ss_dssp T----TS--SHHHHHHTTCGGGGCSSEEEEECTTSCEEEECC
T ss_pred c----cc--hHHHHHHhCCccCCccceEEEECCCCCEEEEec
Confidence 0 11 1357788999 99999999999999987644
No 112
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.99 E-value=4.5e-10 Score=93.64 Aligned_cols=69 Identities=16% Similarity=0.186 Sum_probs=50.5
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.++|.|+|+|||+||+||+... +.++.+++. ++.++-|.+ |+.
T Consensus 18 ~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--------~~~~~~vd~--------d~~------------------- 62 (105)
T 3zzx_A 18 AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--------DVVFLKVDV--------DEC------------------- 62 (105)
T ss_dssp TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TEEEEEEET--------TTC-------------------
T ss_pred cCCCEEEEEEECCCCCCccCCCcchhhhhhccC--------CeEEEEEec--------ccC-------------------
Confidence 3579999999999999999877 776665542 344554442 210
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..|.+.|+|+++||++++ ++|+++.+
T Consensus 63 --------~~l~~~~~V~~~PT~~~~-~~G~~v~~ 88 (105)
T 3zzx_A 63 --------EDIAQDNQIACMPTFLFM-KNGQKLDS 88 (105)
T ss_dssp --------HHHHHHTTCCBSSEEEEE-ETTEEEEE
T ss_pred --------HHHHHHcCCCeecEEEEE-ECCEEEEE
Confidence 146778999999998888 78998753
No 113
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.98 E-value=1.1e-09 Score=93.82 Aligned_cols=68 Identities=13% Similarity=0.114 Sum_probs=55.2
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ |..
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-------~v~~~~vd~--------~~~-------------------- 81 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-------QIVIYKVDT--------EKE-------------------- 81 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-------TCEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-------CEEEEEEeC--------CCC--------------------
Confidence 468999999999999999998 8888888742 477777763 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
..+.+.|++.++|+++++|++|+++
T Consensus 82 -------~~l~~~~~v~~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 82 -------QELAGAFGIRSIPSILFIPMEGKPE 106 (136)
T ss_dssp -------HHHHHHTTCCSSCEEEEECSSSCCE
T ss_pred -------HHHHHHcCCCCCCEEEEECCCCcEE
Confidence 1356789999999999999999986
No 114
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.98 E-value=4.9e-10 Score=94.24 Aligned_cols=79 Identities=8% Similarity=0.122 Sum_probs=56.8
Q ss_pred eEeccccCCCEEEEEEecCCChHhHHHH--H---HHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhC
Q 014387 55 RVNLEVLRRKMVLLLISDLDISQEEVII--L---EQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSA 129 (425)
Q Consensus 55 ~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L---~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~ 129 (425)
.+.++..+||+|+|+|||+||++|+.+. | ..+.+.++. ++.++.|.+ |.
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-------~~~~~~vd~--------~~----------- 72 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-------HFVNLKMDM--------EK----------- 72 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-------HSEEEEECS--------SS-----------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-------CeEEEEEec--------CC-----------
Confidence 4555557899999999999999999987 5 444444432 355555542 21
Q ss_pred CCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 130 MPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 130 mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
+. ...+.+.|++.++|+++++|++|+++..
T Consensus 73 ------------~~--~~~~~~~~~v~~~Pt~~~~d~~G~~~~~ 102 (130)
T 2kuc_A 73 ------------GE--GVELRKKYGVHAYPTLLFINSSGEVVYR 102 (130)
T ss_dssp ------------TT--HHHHHHHTTCCSSCEEEEECTTSCEEEE
T ss_pred ------------cc--hHHHHHHcCCCCCCEEEEECCCCcEEEE
Confidence 00 1356788999999999999999999753
No 115
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=98.94 E-value=1.2e-09 Score=100.12 Aligned_cols=100 Identities=8% Similarity=0.012 Sum_probs=75.7
Q ss_pred CeEecccc-CCC-EEEEEEecCCChHhHH-HH--HHHHHHHHHhhhccCCCce-EEEEEeccCCCCCCchHHHHHHHHHH
Q 014387 54 TRVNLEVL-RRK-MVLLLISDLDISQEEV-II--LEQLYSEARQHQTRHESQY-EVVWLPIVDPNMPWTDNKQKQFQSLQ 127 (425)
Q Consensus 54 ~~V~ls~L-kGK-~VlL~FsAsWC~pCr~-~~--L~~iY~~~k~~~~k~~~~f-EIV~IsIvd~s~~w~D~~~~~F~~~~ 127 (425)
+.++++++ +|| +|+++||+.|||+|.. ++ +.+.|+++++ .++ +|+.||. | +-...+.|.+-.
T Consensus 37 ~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~------~g~d~VigIS~-D-----~~~~~~~f~~~~ 104 (176)
T 4f82_A 37 NACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRA------AGIDEIWCVSV-N-----DAFVMGAWGRDL 104 (176)
T ss_dssp EEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH------TTCCEEEEEES-S-----CHHHHHHHHHHT
T ss_pred eEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHh------CCCCEEEEEeC-C-----CHHHHHHHHHHh
Confidence 78999997 998 5677899999999999 99 9999999975 368 9999996 2 233455664421
Q ss_pred hCCCceeec--cCcccChHHHHHHHHhCCCC------C-----CCeEEEECCCCcEEccc
Q 014387 128 SAMPWYTVY--HPSLIDRAVIQFIKEEWQFG------K-----KPILVVLDPHGKVVCPN 174 (425)
Q Consensus 128 ~~mPW~aV~--~p~l~D~~~~~~L~~~f~v~------~-----iPtlVvLD~~GkVv~~n 174 (425)
.++ ||.+.|+. ..+.+.|++. + .|.++|| ++|+|+...
T Consensus 105 ------~l~~~f~lLsD~~--~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~ 155 (176)
T 4f82_A 105 ------HTAGKVRMMADGS--AAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLA 155 (176)
T ss_dssp ------TCTTTSEEEECTT--CHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEE
T ss_pred ------CCCCCceEEEcCc--hHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEE
Confidence 234 77777864 4778888873 2 5889999 999997643
No 116
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.93 E-value=2e-09 Score=88.74 Aligned_cols=68 Identities=18% Similarity=0.220 Sum_probs=54.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ |.
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--------~~~~~~vd~--------~~--------------------- 65 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--------QADFYKLDV--------DE--------------------- 65 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TT---------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CC---------------------
Confidence 589999999999999999988 888887762 367777763 21
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
+ ..+.+.|++.++|++++++ +|+++.+
T Consensus 66 --~----~~l~~~~~v~~~Pt~~~~~-~G~~~~~ 92 (109)
T 3f3q_A 66 --L----GDVAQKNEVSAMPTLLLFK-NGKEVAK 92 (109)
T ss_dssp --C----HHHHHHTTCCSSSEEEEEE-TTEEEEE
T ss_pred --C----HHHHHHcCCCccCEEEEEE-CCEEEEE
Confidence 0 1366789999999999998 9988753
No 117
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.92 E-value=1.3e-09 Score=91.04 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=53.8
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ |+.
T Consensus 29 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--------d~~------------------- 73 (116)
T 3qfa_C 29 AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS--------NVIFLEVDV--------DDC------------------- 73 (116)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT--------TSEEEEEET--------TTT-------------------
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC-------------------
Confidence 4789999999999999999988 777776652 377777763 211
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|++.++|+++++ ++|+++..
T Consensus 74 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 99 (116)
T 3qfa_C 74 --------QDVASECEVKSMPTFQFF-KKGQKVGE 99 (116)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-SSSSEEEE
T ss_pred --------HHHHHHcCCccccEEEEE-eCCeEEEE
Confidence 246678999999999998 78988753
No 118
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.91 E-value=1.1e-09 Score=96.39 Aligned_cols=67 Identities=12% Similarity=0.114 Sum_probs=53.2
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||+||+.+. |.++++++++ .+.++.|.+ |+.
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~-------~~~~~~vd~--------d~~-------------------- 66 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK-------MAAIYLVDV--------DQT-------------------- 66 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT-------TEEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC-------ceEEEEEEC--------CcC--------------------
Confidence 489999999999999999998 8888877632 477777763 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
..+.+.|++.++|+++ ++++|+++
T Consensus 67 -------~~l~~~~~v~~~Pt~~-~~~~G~~v 90 (149)
T 3gix_A 67 -------AVYTQYFDISYIPSTV-FFFNGQHM 90 (149)
T ss_dssp -------CHHHHHTTCCSSSEEE-EEETTEEE
T ss_pred -------HHHHHHcCCCccCeEE-EEECCeEE
Confidence 1356789999999999 77899988
No 119
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.91 E-value=3e-10 Score=101.43 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=55.1
Q ss_pred eEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCc
Q 014387 55 RVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPW 132 (425)
Q Consensus 55 ~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW 132 (425)
.++....+||+|+|+|||+||+||+.+. |.++.+..+. ++.|+.|.+ |.+.+.
T Consensus 38 ~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-------~~~~~~v~~--------d~~~~~---------- 92 (164)
T 1sen_A 38 GKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-------SHNFVMVNL--------EDEEEP---------- 92 (164)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-------HTTSEEEEE--------EGGGSC----------
T ss_pred HHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-------CCeEEEEEe--------cCCchH----------
Confidence 3445556899999999999999999998 7776655432 356777775 211100
Q ss_pred eeeccCcccChHHHHHHHHhCCC--CCCCeEEEECCCCcEEcc
Q 014387 133 YTVYHPSLIDRAVIQFIKEEWQF--GKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 133 ~aV~~p~l~D~~~~~~L~~~f~v--~~iPtlVvLD~~GkVv~~ 173 (425)
+...|++ .++|+++++|++|+++.+
T Consensus 93 ----------------~~~~~~~~~~~~Pt~~~~d~~G~~~~~ 119 (164)
T 1sen_A 93 ----------------KDEDFSPDGGYIPRILFLDPSGKVHPE 119 (164)
T ss_dssp ----------------SCGGGCTTCSCSSEEEEECTTSCBCTT
T ss_pred ----------------HHHHhcccCCcCCeEEEECCCCCEEEE
Confidence 1123455 669999999999999864
No 120
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.91 E-value=1.5e-09 Score=89.63 Aligned_cols=68 Identities=25% Similarity=0.278 Sum_probs=55.9
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ |..
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-------~v~~~~vd~--------~~~-------------------- 60 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-------KLKIVKIDV--------DEN-------------------- 60 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-------TCEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-------CcEEEEEEC--------CCC--------------------
Confidence 789999999999999999988 8889888842 588888874 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 61 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 85 (112)
T 2voc_A 61 -------QETAGKYGVMSIPTLLVL-KDGEVVE 85 (112)
T ss_dssp -------CSHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCEEEE
Confidence 025568999999999999 9999875
No 121
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.91 E-value=1.9e-09 Score=88.28 Aligned_cols=70 Identities=16% Similarity=0.088 Sum_probs=53.3
Q ss_pred ccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeecc
Q 014387 60 VLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYH 137 (425)
Q Consensus 60 ~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~ 137 (425)
..+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ .+.
T Consensus 21 ~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~-------~~~------------------- 66 (111)
T 2pu9_C 21 AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--------DVIFLKLDC-------NQE------------------- 66 (111)
T ss_dssp TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC-------SST-------------------
T ss_pred hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--------CeEEEEEec-------Ccc-------------------
Confidence 34689999999999999999988 888877762 367777764 111
Q ss_pred CcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 138 PSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 138 p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
+ ..+.+.|++.++|+ ++++++|+++.
T Consensus 67 ----~----~~~~~~~~v~~~Pt-~~~~~~G~~~~ 92 (111)
T 2pu9_C 67 ----N----KTLAKELGIRVVPT-FKILKENSVVG 92 (111)
T ss_dssp ----T----HHHHHHHCCSBSSE-EEEESSSSEEE
T ss_pred ----h----HHHHHHcCCCeeeE-EEEEeCCcEEE
Confidence 1 24667899999999 56679999874
No 122
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.90 E-value=2.3e-09 Score=89.09 Aligned_cols=72 Identities=10% Similarity=0.210 Sum_probs=53.8
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||.|+|+|||+|||||+.+. |.+++++++ ..|+++.+.+ ..+.
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~---------~~v~~~~~~~------~~~~------------------- 73 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK---------AHIYFINSEE------PSQL------------------- 73 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC---------CCCEEEETTC------GGGH-------------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC---------CeEEEEECCC------cCcH-------------------
Confidence 478999999999999999998 888888762 3577777511 1110
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
.....+.+.|++.++|+++++ ++|+++.
T Consensus 74 ----~~~~~~~~~~~i~~~Pt~~~~-~~G~~~~ 101 (118)
T 1zma_A 74 ----NDLQAFRSRYGIPTVPGFVHI-TDGQINV 101 (118)
T ss_dssp ----HHHHHHHHHHTCCSSCEEEEE-ETTEEEE
T ss_pred ----HHHHHHHHHcCCCCCCeEEEE-ECCEEEE
Confidence 112356778999999999999 4898874
No 123
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.89 E-value=4e-09 Score=84.79 Aligned_cols=68 Identities=18% Similarity=0.255 Sum_probs=55.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ |..
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-------~~~~~~v~~--------~~~-------------------- 62 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEG-------KADILKLDV--------DEN-------------------- 62 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT-------TCEEEEEET--------TTC--------------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC-------CcEEEEEEC--------CcC--------------------
Confidence 889999999999999999998 8888888742 478888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|++++++ +|+++.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~~-~G~~~~ 87 (106)
T 3die_A 63 -------PSTAAKYEVMSIPTLIVFK-DGQPVD 87 (106)
T ss_dssp -------HHHHHHTTCCSBSEEEEEE-TTEEEE
T ss_pred -------HHHHHhCCCcccCEEEEEe-CCeEEE
Confidence 1356789999999999995 998875
No 124
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.88 E-value=2.4e-09 Score=93.42 Aligned_cols=69 Identities=7% Similarity=0.026 Sum_probs=54.5
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||+||+.+. |.++++++++ ++.++.|.+ |+. +
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-------~v~~~~vd~--------d~~------------------~- 67 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-------FAVIYLVDI--------TEV------------------P- 67 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-------TEEEEEEET--------TTC------------------C-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-------CeEEEEEcc--------ccC------------------H-
Confidence 489999999999999999998 9999988842 578888874 211 0
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
.+.+.|++.++|+++++ .+|+++..
T Consensus 68 --------~~~~~~~i~~~Pt~~~~-~~G~~v~~ 92 (142)
T 1qgv_A 68 --------DFNKMYELYDPCTVMFF-FRNKHIMI 92 (142)
T ss_dssp --------TTTTSSCSCSSCEEEEE-ETTEEEEE
T ss_pred --------HHHHHcCCCCCCEEEEE-ECCcEEEE
Confidence 13567999999999999 58888753
No 125
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.88 E-value=4.5e-09 Score=84.70 Aligned_cols=68 Identities=16% Similarity=0.158 Sum_probs=54.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||++|+.+. |.++.++++ .++.++.|.+ |..
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~~~-------------------- 60 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHA-------DKVTVAKLNV--------DEN-------------------- 60 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHST-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--------cCC--------------------
Confidence 578999999999999999988 888877763 2478888774 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 61 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 85 (105)
T 1nsw_A 61 -------PETTSQFGIMSIPTLILF-KGGRPVK 85 (105)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCccccEEEEE-eCCeEEE
Confidence 135678999999999999 8999865
No 126
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.87 E-value=2.2e-09 Score=87.41 Aligned_cols=68 Identities=16% Similarity=0.276 Sum_probs=46.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|+|+|+|||+||+||+.+. |.++.+++ .++.++.|.+ |+.
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~--------~~~~~~~vd~--------~~~-------------------- 60 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENY--------NYVEKIEILL--------QDM-------------------- 60 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTC--------TTEEEEEEEE--------CCC--------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHc--------CCceEEEEEC--------CCC--------------------
Confidence 579999999999999999987 77777665 1477777764 111
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|++.++|++++++ +|+++.+
T Consensus 61 -------~~l~~~~~v~~~Pt~~~~~-~G~~~~~ 86 (105)
T 4euy_A 61 -------QEIAGRYAVFTGPTVLLFY-NGKEILR 86 (105)
T ss_dssp ----------------CCCCEEEEEE-TTEEEEE
T ss_pred -------HHHHHhcCCCCCCEEEEEe-CCeEEEE
Confidence 0345678999999999995 9998743
No 127
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.86 E-value=4.7e-09 Score=85.02 Aligned_cols=68 Identities=18% Similarity=0.213 Sum_probs=53.8
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||++|+.+. |.++.+++++ ++.++.|.+ |..
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-------~~~~~~v~~--------~~~-------------------- 63 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-------KLTVAKLNI--------DQN-------------------- 63 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TEEEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-------CcEEEEEEC--------CCC--------------------
Confidence 579999999999999999988 8888887732 477777764 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (108)
T 2trx_A 64 -------PGTAPKYGIRGIPTLLLF-KNGEVAA 88 (108)
T ss_dssp -------TTHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCcccCEEEEE-eCCEEEE
Confidence 024567999999999999 8999875
No 128
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.38 E-value=2.4e-10 Score=96.31 Aligned_cols=78 Identities=14% Similarity=0.213 Sum_probs=57.2
Q ss_pred CCeEeccccCCCEEEEEEecCCChHhHHHH--H---HHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHH
Q 014387 53 KTRVNLEVLRRKMVLLLISDLDISQEEVII--L---EQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQ 127 (425)
Q Consensus 53 g~~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L---~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~ 127 (425)
.+.+.+...+||+|+|+|||+||++|+.+. | .++.+.++ .++.++.|.+ |.+.
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~~------- 66 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE-------ARFVVASVSV--------DTPE------- 66 (130)
Confidence 456677778999999999999999999987 6 66666553 2466666553 1110
Q ss_pred hCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCC-CcE
Q 014387 128 SAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPH-GKV 170 (425)
Q Consensus 128 ~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~-GkV 170 (425)
...+.+.|++.++|+++++|++ |++
T Consensus 67 ------------------~~~~~~~~~v~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 67 ------------------GQELARRYRVPGTPTFVFLVPKAGAW 92 (130)
Confidence 1245678899999999999974 887
No 129
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=5e-09 Score=88.01 Aligned_cols=71 Identities=7% Similarity=0.096 Sum_probs=54.3
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|+|+|+|||+||++|+.+. |.++++++++ ....++.++.|.+ +..
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~~~~~vd~--------~~~-------------------- 72 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKE---QTKGKVKLAAVDA--------TVN-------------------- 72 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHH---HTTTSEEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHh---hcCCcEEEEEEEC--------CCC--------------------
Confidence 479999999999999999988 8899988863 1123577777763 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
..+.+.|++.++|+++++++ |+++
T Consensus 73 -------~~l~~~~~v~~~Pt~~~~~~-g~~~ 96 (133)
T 1x5d_A 73 -------QVLASRYGIRGFPTIKIFQK-GESP 96 (133)
T ss_dssp -------CHHHHHHTCCSSSEEEEEET-TEEE
T ss_pred -------HHHHHhCCCCeeCeEEEEeC-CCce
Confidence 13567789999999999998 8754
No 130
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.86 E-value=3.8e-09 Score=86.45 Aligned_cols=69 Identities=14% Similarity=0.278 Sum_probs=52.2
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.+++++++. .++.++.|.+ |..
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~------~~~~~~~vd~--------~~~-------------------- 65 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN------SNVSFLSIDA--------DEN-------------------- 65 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG------TTSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC------CCEEEEEEec--------ccC--------------------
Confidence 489999999999999999988 8888877632 2577887764 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 66 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 90 (112)
T 3d6i_A 66 -------SEISELFEISAVPYFIII-HKGTILK 90 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCEEEE
Confidence 135678999999999988 6999875
No 131
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=8.4e-09 Score=86.48 Aligned_cols=68 Identities=6% Similarity=0.036 Sum_probs=53.1
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
++++ |+|+|||+||++|+.+. |.++++++++ .++.++.|.+ |+.
T Consensus 21 ~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~------~~v~~~~vd~--------~~~------------------- 66 (126)
T 1x5e_A 21 LEGD-WMIEFYAPWCPACQNLQPEWESFAEWGED------LEVNIAKVDV--------TEQ------------------- 66 (126)
T ss_dssp TSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEET--------TTC-------------------
T ss_pred hCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhcc------CCeEEEEEEC--------cCC-------------------
Confidence 4555 89999999999999998 8999988853 2577777764 211
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
..+.+.|++.++|+++++ ++|++.
T Consensus 67 --------~~~~~~~~v~~~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 67 --------PGLSGRFIINALPTIYHC-KDGEFR 90 (126)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred --------HHHHHHcCCcccCEEEEE-eCCeEE
Confidence 135678999999999999 899864
No 132
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.85 E-value=6.6e-09 Score=84.01 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=53.4
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ |..
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-------~~~~~~v~~--------~~~-------------------- 62 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-------KLKCVKLNT--------DES-------------------- 62 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-------ceEEEEEEC--------CCC--------------------
Confidence 478999999999999999988 8888887742 477887763 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 87 (107)
T 1dby_A 63 -------PNVASEYGIRSIPTIMVF-KGGKKCE 87 (107)
T ss_dssp -------HHHHHHHTCCSSCEEEEE-SSSSEEE
T ss_pred -------HHHHHHCCCCcCCEEEEE-eCCEEEE
Confidence 135567899999998887 7999864
No 133
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.84 E-value=4e-09 Score=88.93 Aligned_cols=69 Identities=9% Similarity=0.070 Sum_probs=51.7
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|+|+|+|||+||++|+.+. |.+++++++. ..++.++.|.+ +.. +
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-----~~~~~~~~vd~--------~~~------------------~- 71 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKG-----QKDLVIAKMDA--------TAN------------------D- 71 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTT-----SSSEEEEEECT--------TTS------------------C-
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-----CCCEEEEEecC--------CcC------------------H-
Confidence 489999999999999999998 9999998853 12466665542 110 0
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
.+.+.|++.++|+++++++.|++
T Consensus 72 --------~~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 72 --------ITNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp --------CCCSSCCCSSSSEEEEECTTCTT
T ss_pred --------HHHhhcCCCcCCEEEEEeCCCcc
Confidence 12346899999999999987754
No 134
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.84 E-value=7e-09 Score=84.71 Aligned_cols=68 Identities=25% Similarity=0.189 Sum_probs=53.8
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ |..
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-------~~~~~~v~~--------~~~-------------------- 66 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-------KIEIVKLNI--------DEN-------------------- 66 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TCEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-------CeEEEEEEc--------CCC--------------------
Confidence 479999999999999999988 8888887732 588888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 67 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 91 (112)
T 1t00_A 67 -------PGTAAKYGVMSIPTLNVY-QGGEVAK 91 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 135678999999998877 7999864
No 135
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.84 E-value=2.6e-09 Score=102.18 Aligned_cols=68 Identities=19% Similarity=0.224 Sum_probs=55.8
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||+||+.+. |.++++++++ ++.++.|.+ |..
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-------~~~~~~vd~--------~~~-------------------- 69 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-------QFILAKLDC--------DAE-------------------- 69 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-------SSEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-------CeEEEEEeC--------ccC--------------------
Confidence 589999999999999999998 9999988842 578888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|+|.++||++++ ++|+++.
T Consensus 70 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 94 (287)
T 3qou_A 70 -------QMIAAQFGLRAIPTVYLF-QNGQPVD 94 (287)
T ss_dssp -------HHHHHTTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCCCCeEEEE-ECCEEEE
Confidence 146678999999999999 7998875
No 136
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.84 E-value=7.6e-09 Score=86.36 Aligned_cols=68 Identities=15% Similarity=0.219 Sum_probs=54.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||++|+.+. |.+++++++ .++.++.|.+ |..
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~--------d~~-------------------- 74 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQH-------GKVVMAKVDI--------DDH-------------------- 74 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TSSEEEEEET--------TTT--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------CCC--------------------
Confidence 479999999999999999988 888888763 2577887764 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 75 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 99 (119)
T 1w4v_A 75 -------TDLAIEYEVSAVPTVLAM-KNGDVVD 99 (119)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCcEEE
Confidence 136678999999999999 8999875
No 137
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.83 E-value=9.2e-09 Score=82.87 Aligned_cols=69 Identities=14% Similarity=0.153 Sum_probs=55.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++.+++++ ++.++.|.+ |..
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-------~~~~~~v~~--------~~~-------------------- 64 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-------KAVFGRLNV--------DEN-------------------- 64 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TSEEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-------CceEEEEcc--------ccC--------------------
Confidence 589999999999999999988 8888888742 467777763 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|++.++|+++++ ++|+++..
T Consensus 65 -------~~~~~~~~i~~~Pt~~~~-~~g~~~~~ 90 (109)
T 3tco_A 65 -------QKIADKYSVLNIPTTLIF-VNGQLVDS 90 (109)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHhcCcccCCEEEEE-cCCcEEEe
Confidence 135678999999999999 99998753
No 138
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.83 E-value=6.9e-09 Score=84.38 Aligned_cols=67 Identities=6% Similarity=-0.005 Sum_probs=52.7
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++.+++. ++.++.|.+ |..
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--------~~~~~~vd~--------~~~-------------------- 63 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--------QAVFLEVDV--------HQC-------------------- 63 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS--------------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--------CcEEEEEEC--------ccC--------------------
Confidence 589999999999999999988 877777651 477777764 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 1gh2_A 64 -------QGTAATNNISATPTFQFF-RNKVRID 88 (107)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCcccEEEEE-ECCeEEE
Confidence 135678999999999988 7898875
No 139
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.83 E-value=2.3e-09 Score=92.03 Aligned_cols=73 Identities=11% Similarity=0.187 Sum_probs=48.8
Q ss_pred ccccCCCEEEEEEecCCChHhHHHHHHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeecc
Q 014387 58 LEVLRRKMVLLLISDLDISQEEVIILEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYH 137 (425)
Q Consensus 58 ls~LkGK~VlL~FsAsWC~pCr~~~L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~ 137 (425)
++..+||+|+|+|||+||+||+.+. ..++++.+ .+.|+++.+ | .|.
T Consensus 35 l~~~~~k~vvv~F~a~wC~~C~~~~--p~l~~l~~-------~~~v~~~~v-d-----~~~------------------- 80 (133)
T 3cxg_A 35 FSSTQNSSIVIKFGAVWCKPCNKIK--EYFKNQLN-------YYYVTLVDI-D-----VDI------------------- 80 (133)
T ss_dssp HTC-CCSEEEEEEECTTCHHHHHTH--HHHHGGGG-------TEECEEEEE-E-----TTT-------------------
T ss_pred HHhcCCCEEEEEEECCCCHHHHHHH--HHHHHHHH-------hcCEEEEEE-e-----ccc-------------------
Confidence 4566789999999999999999965 33334422 234555554 1 111
Q ss_pred CcccChHHHHHHHHhCCCCCCCeEEEE-CCCCc--EEc
Q 014387 138 PSLIDRAVIQFIKEEWQFGKKPILVVL-DPHGK--VVC 172 (425)
Q Consensus 138 p~l~D~~~~~~L~~~f~v~~iPtlVvL-D~~Gk--Vv~ 172 (425)
+ ..+.+.|++.++|+++++ |++|+ ++.
T Consensus 81 ----~----~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~ 110 (133)
T 3cxg_A 81 ----H----PKLNDQHNIKALPTFEFYFNLNNEWVLVH 110 (133)
T ss_dssp ----C----HHHHHHTTCCSSSEEEEEEEETTEEEEEE
T ss_pred ----h----HHHHHhcCCCCCCEEEEEEecCCCeEEEE
Confidence 0 246678999999999999 45565 654
No 140
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.82 E-value=2.5e-09 Score=91.24 Aligned_cols=68 Identities=18% Similarity=0.196 Sum_probs=54.5
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ |+.
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~v~~--------~~~------------------- 88 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENYP--------SLMFLVIDV--------DEL------------------- 88 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS-------------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEeC--------ccc-------------------
Confidence 5699999999999999999988 888877652 477887764 211
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 89 --------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 113 (139)
T 3d22_A 89 --------SDFSASWEIKATPTFFFL-RDGQQVD 113 (139)
T ss_dssp --------HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred --------HHHHHHcCCCcccEEEEE-cCCeEEE
Confidence 146678999999999888 8999874
No 141
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.82 E-value=1.4e-08 Score=81.64 Aligned_cols=68 Identities=21% Similarity=0.191 Sum_probs=54.8
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||++|+.+. |.++.+++++ ++.++.|.+ |..
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-------~~~~~~v~~--------~~~-------------------- 63 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-------KVTVAKVNI--------DDN-------------------- 63 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------SEEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-------cEEEEEEEC--------CCC--------------------
Confidence 579999999999999999988 8888888742 577887764 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 2i4a_A 64 -------PETPNAYQVRSIPTLMLV-RDGKVID 88 (107)
T ss_dssp -------CHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCccCEEEEE-eCCEEEE
Confidence 035667999999999999 9999875
No 142
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.82 E-value=9.9e-09 Score=83.32 Aligned_cols=68 Identities=12% Similarity=0.265 Sum_probs=54.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|.|+|+|||+||++|+.+. |.++.+++++ ++.++.|.+ |..
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-------~v~~~~vd~--------~~~-------------------- 65 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-------SFGFYYVDV--------EEE-------------------- 65 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-------TSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-------ceEEEEEEC--------CcC--------------------
Confidence 578999999999999999988 8888887732 578888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 66 -------~~l~~~~~v~~~Pt~~~~-~~g~~~~ 90 (111)
T 3gnj_A 66 -------KTLFQRFSLKGVPQILYF-KDGEYKG 90 (111)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEEE
T ss_pred -------hhHHHhcCCCcCCEEEEE-ECCEEEE
Confidence 145678999999999999 7898764
No 143
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.81 E-value=9.6e-09 Score=86.93 Aligned_cols=67 Identities=13% Similarity=0.244 Sum_probs=52.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ |+.
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--------d~~-------------------- 80 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--------NVLFLKVDT--------DEL-------------------- 80 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--------TTS--------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--------ccC--------------------
Confidence 699999999999999999988 888777651 467777663 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 81 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1xfl_A 81 -------KSVASDWAIQAMPTFMFL-KEGKILD 105 (124)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCccCEEEEE-ECCEEEE
Confidence 146678999999998877 8999875
No 144
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.81 E-value=6.9e-09 Score=88.25 Aligned_cols=70 Identities=14% Similarity=0.232 Sum_probs=53.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|+|+|+|||+||++|+.+. |.++++++++ + +.++.++.|.+ +.
T Consensus 33 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~---~-~~~v~~~~vd~--------~~--------------------- 79 (140)
T 2dj1_A 33 DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKD---N-DPPIAVAKIDA--------TS--------------------- 79 (140)
T ss_dssp TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHS---S-SSCCEEEEECT--------TT---------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhc---c-CCceEEEEEeC--------cc---------------------
Confidence 589999999999999999998 9999999864 1 22355655542 11
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
+ ..+.+.|++.++|+++++ ++|++.
T Consensus 80 --~----~~~~~~~~v~~~Pt~~~~-~~G~~~ 104 (140)
T 2dj1_A 80 --A----SMLASKFDVSGYPTIKIL-KKGQAV 104 (140)
T ss_dssp --C----HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred --c----HHHHHHCCCCccCeEEEE-ECCcEE
Confidence 0 246678999999999999 789854
No 145
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.80 E-value=7.6e-09 Score=83.18 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=53.6
Q ss_pred ccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeecc
Q 014387 60 VLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYH 137 (425)
Q Consensus 60 ~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~ 137 (425)
..+||+|+|+|||+||++|+.+. |.++.++++ ++.++.|.+ |+.
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--------~~~~~~vd~--------~~~------------------ 62 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--------NVIFLEVDV--------DDC------------------ 62 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST--------TSEEEEEET--------TTC------------------
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc--------CeEEEEEEh--------hhh------------------
Confidence 34689999999999999999988 888777662 367777763 211
Q ss_pred CcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 138 PSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 138 p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 63 ---------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (105)
T 3m9j_A 63 ---------QDVASESEVKSMPTFQFF-KKGQKVG 87 (105)
T ss_dssp ---------HHHHHHTTCCBSSEEEEE-ETTEEEE
T ss_pred ---------HHHHHHcCCCcCcEEEEE-ECCeEEE
Confidence 135678999999999999 7888874
No 146
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.80 E-value=9.1e-09 Score=90.04 Aligned_cols=67 Identities=12% Similarity=0.171 Sum_probs=53.8
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++++++. ++.++.|.+ |..
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--------~~~-------------------- 74 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--------QVSFVKLEA--------EGV-------------------- 74 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS--------------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--------CeEEEEEEC--------CCC--------------------
Confidence 489999999999999999988 777777651 477887764 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|++++++ +|+++.
T Consensus 75 -------~~l~~~~~v~~~Pt~~~~~-~G~~~~ 99 (153)
T 2wz9_A 75 -------PEVSEKYEISSVPTFLFFK-NSQKID 99 (153)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCCCCCEEEEEE-CCEEEE
Confidence 1356789999999999999 999875
No 147
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.80 E-value=1.1e-08 Score=83.36 Aligned_cols=68 Identities=13% Similarity=0.135 Sum_probs=55.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++.+++++ ++.++.|.+ |..
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-------~v~~~~v~~--------~~~-------------------- 68 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-------RLKVVKLEI--------DPN-------------------- 68 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-------TCEEEEEES--------TTC--------------------
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-------cEEEEEEEc--------CCC--------------------
Confidence 579999999999999999988 8888877632 488888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 69 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (115)
T 1thx_A 69 -------PTTVKKYKVEGVPALRLV-KGEQILD 93 (115)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCceeEEEEE-cCCEEEE
Confidence 135678999999999999 8999875
No 148
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.79 E-value=1.2e-08 Score=81.94 Aligned_cols=69 Identities=22% Similarity=0.205 Sum_probs=53.6
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.+||+|+|+|||+||++|+.+. |.++.++++ .++.++.|.+ |.
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~-------------------- 62 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFA-------DNVVVLKVDV--------DE-------------------- 62 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TT--------------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-------CCeEEEEEec--------cc--------------------
Confidence 4789999999999999999988 888877763 2577777763 21
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
+ ..+.+.|++.++|+++++ ++|+++.
T Consensus 63 ---~----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (106)
T 1xwb_A 63 ---C----EDIAMEYNISSMPTFVFL-KNGVKVE 88 (106)
T ss_dssp ---C----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ---h----HHHHHHcCCCcccEEEEE-cCCcEEE
Confidence 1 135678999999997776 7898875
No 149
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.79 E-value=3.9e-09 Score=90.52 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=54.3
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
+++ +|+|+|||+||+||+.+. |.++++++ ++.++.|.+.+ +.+....
T Consensus 30 ~~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~---------~v~~~~vd~~~------~~~~~~~--------------- 78 (135)
T 3emx_A 30 LQG-DAILAVYSKTCPHCHRDWPQLIQASKEV---------DVPIVMFIWGS------LIGEREL--------------- 78 (135)
T ss_dssp HTS-SEEEEEEETTCHHHHHHHHHHHHHHTTC---------CSCEEEEEECT------TCCHHHH---------------
T ss_pred hCC-cEEEEEECCcCHhhhHhChhHHHHHHHC---------CCEEEEEECCC------chhhhhh---------------
Confidence 345 899999999999999988 77776554 27788887622 1111111
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
| ....+.+.|++.++|++++++ +|+++.+
T Consensus 79 ---d--~~~~l~~~~~v~~~Pt~~~~~-~G~~v~~ 107 (135)
T 3emx_A 79 ---S--AARLEMNKAGVEGTPTLVFYK-EGRIVDK 107 (135)
T ss_dssp ---H--HHHHHHHHHTCCSSSEEEEEE-TTEEEEE
T ss_pred ---h--hhHHHHHHcCCceeCeEEEEc-CCEEEEE
Confidence 1 224677899999999888887 9998753
No 150
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.79 E-value=4.4e-08 Score=106.81 Aligned_cols=149 Identities=11% Similarity=0.005 Sum_probs=92.0
Q ss_pred ccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceee
Q 014387 58 LEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTV 135 (425)
Q Consensus 58 ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV 135 (425)
++.++||+|+|+|||+||+||+.++ |.++++++++ ++.++.|.+ ++.
T Consensus 450 ~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-------~v~~~~vd~--------~~~---------------- 498 (780)
T 3apo_A 450 FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYG-------QLKVGTLDC--------TIH---------------- 498 (780)
T ss_dssp SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TCEEEEEET--------TTC----------------
T ss_pred HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-------CeEEEEEeC--------CCC----------------
Confidence 3445899999999999999999988 9999988842 577777763 211
Q ss_pred ccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccccchhhhhcCCccCCCCchhHHHhhhhcccceeccccCCCcc
Q 014387 136 YHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNALHMMWIWGSLAYPFSTAREEALWREETWRLELLVDGLDPV 215 (425)
Q Consensus 136 ~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na~~~I~~~g~~aFPft~~~~~~L~~~~~w~~~ll~d~~d~~ 215 (425)
..+.+.|+++++|++++++ +|++.... | +.+.....+..++.. . ..+. .++..
T Consensus 499 -----------~~~~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~fi~~~~-~-~~v~-~l~~~ 551 (780)
T 3apo_A 499 -----------EGLCNMYNIQAYPTTVVFN-QSSIHEYE--------G----HHSAEQILEFIEDLR-N-PSVV-SLTPS 551 (780)
T ss_dssp -----------HHHHHHTTCCSSSEEEEEE-TTEEEEEC--------S----CSCHHHHHHHHHHHH-S-CSEE-ECCHH
T ss_pred -----------HHHHHHcCCCcCCeEEEEc-CCceeeec--------C----cccHHHHHHHHHhhc-c-ccee-ecCcc
Confidence 1256789999999999994 57653221 2 112222222221100 0 0000 01111
Q ss_pred -cccccc---CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC
Q 014387 216 -ILNWMA---EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN 264 (425)
Q Consensus 216 -i~~~~~---egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~ 264 (425)
..+-+. .++.+.++|.+. |+.|+++.+.+.++++.....+-++.|..+.
T Consensus 552 ~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~ 605 (780)
T 3apo_A 552 TFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQ 605 (780)
T ss_dssp HHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT
T ss_pred cHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcc
Confidence 111112 256667777777 9999999999999987755556666665553
No 151
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.79 E-value=5.6e-09 Score=89.00 Aligned_cols=68 Identities=19% Similarity=0.265 Sum_probs=54.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++.+++++ ++.++.|.+ |.. +
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-------~v~~~~vd~--------~~~------------------~- 84 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-------KLTVAKLNI--------DQN------------------P- 84 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-------TEEEEEEET--------TTC------------------C-
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-------CeEEEEEEC--------CCC------------------H-
Confidence 579999999999999999988 8888887742 578888774 211 0
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
.+.+.|++.++|+++++ ++|+++.
T Consensus 85 --------~l~~~~~v~~~Pt~~~~-~~G~~~~ 108 (128)
T 2o8v_B 85 --------GTAPKYGIRGIPTLLLF-KNGEVAA 108 (128)
T ss_dssp --------TTSGGGTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCccCEEEEE-eCCEEEE
Confidence 24457899999999999 8999874
No 152
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.78 E-value=1.1e-08 Score=90.30 Aligned_cols=68 Identities=6% Similarity=0.045 Sum_probs=55.3
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||+||+.+. |.++++++++ ++.++.|.+ |+.
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-------~v~~~~vd~--------~~~-------------------- 107 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-------QVRLAKIDT--------QAH-------------------- 107 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TCEEEEEET--------TTS--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-------CEEEEEEeC--------Ccc--------------------
Confidence 589999999999999999999 9999988842 477887764 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|+++++|+++++ ++|+++.
T Consensus 108 -------~~l~~~~~i~~~Pt~~~~-~~G~~~~ 132 (155)
T 2ppt_A 108 -------PAVAGRHRIQGIPAFILF-HKGRELA 132 (155)
T ss_dssp -------THHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcCCEEEEE-eCCeEEE
Confidence 136678999999999999 7999875
No 153
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.78 E-value=7.5e-09 Score=86.70 Aligned_cols=68 Identities=10% Similarity=0.073 Sum_probs=53.2
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||+|+|+|||+||++|+.+. |.++++++ .++.++.|.+ |..
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--------~~v~~~~vd~--------~~~-------------------- 65 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN--------KDVTFIKVDV--------DKN-------------------- 65 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--------CCeEEEEEEC--------CCC--------------------
Confidence 489999999999999999988 87777765 2577888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECC---CCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDP---HGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~---~GkVv~ 172 (425)
..+.+.|++.++|++++++. +|+++.
T Consensus 66 -------~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~ 94 (118)
T 2f51_A 66 -------GNAADAYGVSSIPALFFVKKEGNEIKTLD 94 (118)
T ss_dssp -------HHHHHHTTCCSSSEEEEEEEETTEEEEEE
T ss_pred -------HHHHHhcCCCCCCEEEEEeCCCCcceEEE
Confidence 13567899999999999986 477764
No 154
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.78 E-value=7.6e-09 Score=86.36 Aligned_cols=69 Identities=16% Similarity=0.083 Sum_probs=51.8
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ .+.
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~~~~~~vd~-------~~~-------------------- 79 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--------DVIFLKLDC-------NQE-------------------- 79 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC-------SST--------------------
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--------CCEEEEEec-------Ccc--------------------
Confidence 3789999999999999999988 888877652 366776663 111
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
+ ..+.+.|++.++|+++ ++++|+++.
T Consensus 80 ---~----~~~~~~~~v~~~Pt~~-~~~~G~~~~ 105 (124)
T 1faa_A 80 ---N----KTLAKELGIRVVPTFK-ILKENSVVG 105 (124)
T ss_dssp ---T----HHHHHHHCCSSSSEEE-EEETTEEEE
T ss_pred ---h----HHHHHHcCCCeeeEEE-EEeCCcEEE
Confidence 1 2456789999999955 558999875
No 155
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.78 E-value=1.6e-08 Score=81.24 Aligned_cols=68 Identities=18% Similarity=0.202 Sum_probs=54.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||.|+|+||++||++|+.+. |.++.++++ .++.++.|.+ |..
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 61 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYE-------GKLLVAKLDV--------DEN-------------------- 61 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CceEEEEEEC--------CCC--------------------
Confidence 479999999999999999988 888887763 2577777764 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 62 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (109)
T 2yzu_A 62 -------PKTAMRYRVMSIPTVILF-KDGQPVE 86 (109)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HhHHHhCCCCcCCEEEEE-eCCcEee
Confidence 135678999999999999 8999875
No 156
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.78 E-value=9.8e-09 Score=85.27 Aligned_cols=67 Identities=4% Similarity=-0.126 Sum_probs=53.5
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ +..
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-------~~~~~~vd~--------~~~-------------------- 64 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-------KVRAGKVDC--------QAY-------------------- 64 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TCEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-------CeEEEEEeC--------cCC--------------------
Confidence 478999999999999999988 8888888842 577777764 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
..+.+.|++.++|+++++++.|++
T Consensus 65 -------~~~~~~~~v~~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 65 -------PQTCQKAGIKAYPSVKLYQYERAK 88 (122)
T ss_dssp -------HHHHHHTTCCSSSEEEEEEEEGGG
T ss_pred -------HHHHHHcCCCccceEEEEeCCCcc
Confidence 135668999999999999988764
No 157
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.78 E-value=9.7e-09 Score=88.81 Aligned_cols=69 Identities=7% Similarity=0.085 Sum_probs=55.0
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
-+||+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ |..
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-------~~~~~~vd~--------~~~------------------- 98 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-------KVRFVKVNT--------EAE------------------- 98 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-------TCEEEEEET--------TTC-------------------
T ss_pred hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-------ceEEEEEEC--------cCC-------------------
Confidence 4689999999999999999998 8888888742 477777763 211
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 99 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 123 (148)
T 3p2a_A 99 --------PALSTRFRIRSIPTIMLY-RNGKMID 123 (148)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHHCCCCccCEEEEE-ECCeEEE
Confidence 145678999999999998 5998875
No 158
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.78 E-value=1.1e-08 Score=85.37 Aligned_cols=67 Identities=13% Similarity=0.151 Sum_probs=52.5
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ |..
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~--------~v~~~~vd~--------~~~-------------------- 72 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP--------DVRFVKCDV--------DES-------------------- 72 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC--------------------
Confidence 589999999999999999988 888777652 377777763 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 73 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 97 (114)
T 2oe3_A 73 -------PDIAKECEVTAMPTFVLG-KDGQLIG 97 (114)
T ss_dssp -------HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -------HHHHHHCCCCcccEEEEE-eCCeEEE
Confidence 135678999999998876 8999864
No 159
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.77 E-value=1.1e-08 Score=83.45 Aligned_cols=67 Identities=13% Similarity=0.103 Sum_probs=52.7
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcc
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSL 140 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l 140 (425)
||+|+|+|||+||++|+.+. |.++.++++ .++.++.|.+ |.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~---------------------- 66 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYA-------GKVIFLKVDV--------DA---------------------- 66 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TT----------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CCeEEEEEEC--------Cc----------------------
Confidence 89999999999999999988 888887763 2577887763 21
Q ss_pred cChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 141 IDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 141 ~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
+ ..+.+.|++.++|+++++ ++|+++.
T Consensus 67 -~----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 92 (112)
T 1ep7_A 67 -V----AAVAEAAGITAMPTFHVY-KDGVKAD 92 (112)
T ss_dssp -T----HHHHHHHTCCBSSEEEEE-ETTEEEE
T ss_pred -h----HHHHHHcCCCcccEEEEE-ECCeEEE
Confidence 0 145677899999997776 8999875
No 160
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.77 E-value=9.3e-09 Score=91.71 Aligned_cols=93 Identities=13% Similarity=0.115 Sum_probs=62.3
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHH---HHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceee
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQ---LYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTV 135 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~---iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV 135 (425)
-.||+|+|+|||+||+||+... +.+ +.+.++ ..+|.|.+ |.+ +
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---------~~fv~V~v--------D~e-----------~---- 89 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---------NKFIMLNL--------MHE-----------T---- 89 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---------HTCEEEEE--------SSC-----------C----
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---------cCeEEEEe--------cCC-----------c----
Confidence 3689999999999999999976 333 222221 23566654 110 0
Q ss_pred ccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccccchhhhhcCCccCCCCchhHHHhhhh
Q 014387 136 YHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNALHMMWIWGSLAYPFSTAREEALWRE 200 (425)
Q Consensus 136 ~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na~~~I~~~g~~aFPft~~~~~~L~~~ 200 (425)
.+ +...|++.++||++++|++|+++.+- +-..+...|++.+...+.+++.
T Consensus 90 -----~~------~~~~~~v~~~PT~~f~~~~G~~v~~~----~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 90 -----TD------KNLSPDGQYVPRIMFVDPSLTVRADI----AGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp -----SC------GGGCTTCCCSSEEEEECTTSCBCTTC----CCSCTTSTTCCCGGGHHHHHHH
T ss_pred -----hh------hHhhcCCCCCCEEEEECCCCCEEEEE----eCCcCCcccccchhhHHHHHHH
Confidence 01 12357889999999999999998732 2233456789988888887653
No 161
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.75 E-value=2.1e-08 Score=82.52 Aligned_cols=67 Identities=13% Similarity=0.109 Sum_probs=52.3
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ |..
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--------~~~-------------------- 68 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--------KMVFIKVDV--------DEV-------------------- 68 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTT--------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--------CCEEEEEEC--------CCC--------------------
Confidence 689999999999999999988 888877652 477887764 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 69 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (112)
T 1syr_A 69 -------SEVTEKENITSMPTFKVY-KNGSSVD 93 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCcEEE
Confidence 135677999999997776 6999865
No 162
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.74 E-value=2.5e-08 Score=79.91 Aligned_cols=68 Identities=15% Similarity=0.129 Sum_probs=53.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|+++|+|||+||++|+.+. |.++.+++++ ++.++.|.+ |..
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-------~~~~~~v~~--------~~~-------------------- 61 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-------KIAVYKLNT--------DEA-------------------- 61 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-------ceEEEEEcC--------cch--------------------
Confidence 478999999999999999988 8888877742 477777763 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 62 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (105)
T 1fb6_A 62 -------PGIATQYNIRSIPTVLFF-KNGERKE 86 (105)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCeEEE
Confidence 135678999999998877 7999865
No 163
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.74 E-value=1.8e-08 Score=83.68 Aligned_cols=67 Identities=13% Similarity=0.195 Sum_probs=52.5
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++.++++ ++.++.|.+ |.
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~vd~--------~~--------------------- 75 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP--------NAVFLKVDV--------DE--------------------- 75 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TT---------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--------CC---------------------
Confidence 589999999999999999988 888777652 377777764 21
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
+ ..+.+.|++.++|+++++ ++|+++.
T Consensus 76 --~----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 101 (122)
T 2vlu_A 76 --L----KPIAEQFSVEAMPTFLFM-KEGDVKD 101 (122)
T ss_dssp --C----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --C----HHHHHHcCCCcccEEEEE-eCCEEEE
Confidence 0 135678999999998777 8999874
No 164
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.74 E-value=2.3e-08 Score=79.44 Aligned_cols=67 Identities=13% Similarity=0.106 Sum_probs=53.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++.++++ ++.++.|.+ |..
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--------~~~~~~v~~--------~~~-------------------- 58 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYP--------QVGFGKLNS--------DEN-------------------- 58 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcC--------CceEEEEEC--------CCC--------------------
Confidence 689999999999999999988 777776652 277877763 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 59 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 83 (104)
T 2e0q_A 59 -------PDIAARYGVMSLPTVIFF-KDGEPVD 83 (104)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCccccCEEEEE-ECCeEhh
Confidence 135678999999999999 8999874
No 165
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.74 E-value=5.4e-08 Score=89.42 Aligned_cols=155 Identities=10% Similarity=-0.003 Sum_probs=85.7
Q ss_pred ccCCCEEEEEEecC-CChHhHHHHHHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 60 VLRRKMVLLLISDL-DISQEEVIILEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 60 ~LkGK~VlL~FsAs-WC~pCr~~~L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.+++++++++|||. ||++|+... .+++++.+ . ..++.++.|.+ |..
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~--~~~~~la~---~-~~~v~~~~vd~--------~~~------------------- 65 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLK--QLVQELSE---L-TDKLSYEIVDF--------DTP------------------- 65 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHH--HHHHHHHT---T-CTTEEEEEEET--------TSH-------------------
T ss_pred hcCCCeEEEEEecCCCCchhHHHH--HHHHHHHh---h-CCceEEEEEeC--------CCc-------------------
Confidence 45677899999999 999998755 33334432 1 23577777653 210
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccccchhhhhcCCccCCCCchhHHHhhhhcccceeccccCCCccccc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNALHMMWIWGSLAYPFSTAREEALWREETWRLELLVDGLDPVILN 218 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na~~~I~~~g~~aFPft~~~~~~L~~~~~w~~~ll~d~~d~~i~~ 218 (425)
....+.+.|++.++|+++++ ++|+.+.. .-.|. |-. ....++.... .....-...++....+
T Consensus 66 ------~~~~~~~~~~v~~~Pt~~~~-~~g~~~~~------~~~G~---~~~-~~l~~~l~~~-l~~~~~~~~l~~~~~~ 127 (226)
T 1a8l_A 66 ------EGKELAKRYRIDRAPATTIT-QDGKDFGV------RYFGL---PAG-HEFAAFLEDI-VDVSREETNLMDETKQ 127 (226)
T ss_dssp ------HHHHHHHHTTCCSSSEEEEE-ETTBCCSE------EEESC---CCT-THHHHHHHHH-HHHHHTCCCCCHHHHH
T ss_pred ------ccHHHHHHcCCCcCceEEEE-cCCceeeE------EEecc---CcH-HHHHHHHHHH-HhhcCCCCCCCHHHHH
Confidence 01246678999999999998 44542100 00011 110 1111111100 0000000012221111
Q ss_pred cc--cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC----CCeeEEEeccCCC
Q 014387 219 WM--AEGRYICLYGGED-MDWIRKFTTATNAVAKTAG----IPLGMVYVGKSNP 265 (425)
Q Consensus 219 ~~--~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~----~~~Eiv~Vs~d~~ 265 (425)
.+ ..++.+.++|.+. |++|+.+.+.+.++++... ..+.++.|..+..
T Consensus 128 ~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~ 181 (226)
T 1a8l_A 128 AIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY 181 (226)
T ss_dssp HHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC
T ss_pred HHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC
Confidence 11 3455658888888 9999999999999966543 5788888877643
No 166
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.74 E-value=1.6e-08 Score=81.84 Aligned_cols=71 Identities=11% Similarity=0.112 Sum_probs=51.5
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|.|+|+|||+||++|+.+. |.++.++++. ...++.++.|.+ +..
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~~~~~vd~--------~~~-------------------- 67 (111)
T 3uvt_A 20 AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFP----GLAGVKIAEVDC--------TAE-------------------- 67 (111)
T ss_dssp HSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCC----C-CCEEEEEEET--------TTC--------------------
T ss_pred cCCcEEEEEECCCChhHHHhhHHHHHHHHHhhc----cCCceEEEEEec--------ccc--------------------
Confidence 488999999999999999987 7777666532 113566666653 111
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 68 -------~~l~~~~~v~~~Pt~~~~-~~g~~~~ 92 (111)
T 3uvt_A 68 -------RNICSKYSVRGYPTLLLF-RGGKKVS 92 (111)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HhHHHhcCCCcccEEEEE-eCCcEEE
Confidence 135678999999998888 7888764
No 167
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.73 E-value=2.7e-08 Score=90.88 Aligned_cols=84 Identities=11% Similarity=0.053 Sum_probs=53.2
Q ss_pred EeccccCCCEEEEEEecCCChHhHHHH-----HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCC
Q 014387 56 VNLEVLRRKMVLLLISDLDISQEEVII-----LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAM 130 (425)
Q Consensus 56 V~ls~LkGK~VlL~FsAsWC~pCr~~~-----L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~m 130 (425)
+.....+||+|+|+|||+||+||+... ..++-+.+++ +|-+|-|.. |+..+--..|.
T Consensus 32 ~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-------~fv~ikVD~--------de~~~l~~~y~--- 93 (173)
T 3ira_A 32 FEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-------AFVSIKVDR--------EERPDIDNIYM--- 93 (173)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-------HCEEEEEET--------TTCHHHHHHHH---
T ss_pred HHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-------cCceeeeCC--------cccCcHHHHHH---
Confidence 444456799999999999999999854 2345555532 344444432 22111101110
Q ss_pred CceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 131 PWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 131 PW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+...+++.++|+++++|++|+++..
T Consensus 94 ----------------~~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 94 ----------------TVCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp ----------------HHHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred ----------------HHHHHHcCCCCCcceeeECCCCCceee
Confidence 122334799999999999999999863
No 168
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.73 E-value=1.5e-08 Score=83.54 Aligned_cols=67 Identities=16% Similarity=0.193 Sum_probs=51.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|.++|+|||+||++|+... |.++.+++ .++.++.|.+ |.
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~--------~~v~~~~vd~--------~~--------------------- 60 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARA--------PQVAISSVDS--------EA--------------------- 60 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTC--------TTSCEEEEEG--------GG---------------------
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHC--------CCcEEEEEcC--------cC---------------------
Confidence 578999999999999999987 65555443 2467777763 21
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
+ ..+.+.|++.++|+++++ ++|+++.
T Consensus 61 --~----~~l~~~~~v~~~Pt~~~~-~~G~~v~ 86 (110)
T 2l6c_A 61 --R----PELMKELGFERVPTLVFI-RDGKVAK 86 (110)
T ss_dssp --C----HHHHHHTTCCSSCEEEEE-ESSSEEE
T ss_pred --C----HHHHHHcCCcccCEEEEE-ECCEEEE
Confidence 0 136678999999999999 8999875
No 169
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.72 E-value=1.3e-08 Score=85.35 Aligned_cols=66 Identities=8% Similarity=0.057 Sum_probs=52.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|+|+|+|||+||++|+.+. |.++++++++ .+.++.|.+ |..
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-------~~~~~~vd~--------~~~-------------------- 78 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-------VVKVGAVNA--------DKH-------------------- 78 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-------TSEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-------ceEEEEEeC--------CCC--------------------
Confidence 478999999999999999988 8888887742 477777763 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGK 169 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~Gk 169 (425)
..+.+.|++.++|+++++++.|+
T Consensus 79 -------~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 79 -------QSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp -------HHHHHHHTCCSSSEEEEESSCTT
T ss_pred -------HHHHHHcCCCccCEEEEEeCCCC
Confidence 14567789999999999999987
No 170
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.71 E-value=1.6e-08 Score=86.46 Aligned_cols=70 Identities=9% Similarity=0.069 Sum_probs=52.3
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|+|+|+|||+||+||+.+. |.++++++++ .++.++.|.+ |+..
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~------~~v~~~~vd~--------~~~~------------------- 71 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC------TGLNFGKVDV--------GRYT------------------- 71 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS------SSCEEEECCT--------TTCH-------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC------CCeEEEEEeC--------ccCH-------------------
Confidence 567999999999999999988 9999988842 2577776653 2211
Q ss_pred ccChHHHHHHHHhCCCC------CCCeEEEECCCCcEEcc
Q 014387 140 LIDRAVIQFIKEEWQFG------KKPILVVLDPHGKVVCP 173 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~------~iPtlVvLD~~GkVv~~ 173 (425)
.+.+.|++. ++|+++++ ++|+++.+
T Consensus 72 --------~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~ 102 (137)
T 2dj0_A 72 --------DVSTRYKVSTSPLTKQLPTLILF-QGGKEAMR 102 (137)
T ss_dssp --------HHHHHTTCCCCSSSSCSSEEEEE-SSSSEEEE
T ss_pred --------HHHHHccCcccCCcCCCCEEEEE-ECCEEEEE
Confidence 234556666 99999999 78998753
No 171
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.71 E-value=2.2e-08 Score=86.16 Aligned_cols=67 Identities=15% Similarity=0.204 Sum_probs=53.6
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcc
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSL 140 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l 140 (425)
+|+|+|+|||+||++|+.+. |.++.+++++ ++.++.|.+ |..
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-------~v~~~~vd~--------~~~--------------------- 67 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-------SAVFGRINI--------ATN--------------------- 67 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TSEEEEEET--------TTC---------------------
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-------ceEEEEEEC--------CcC---------------------
Confidence 79999999999999999998 8899888842 477887763 211
Q ss_pred cChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 141 IDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 141 ~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 68 ------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 92 (140)
T 3hz4_A 68 ------PWTAEKYGVQGTPTFKFF-CHGRPVW 92 (140)
T ss_dssp ------HHHHHHHTCCEESEEEEE-ETTEEEE
T ss_pred ------HhHHHHCCCCcCCEEEEE-eCCcEEE
Confidence 135667899999999988 7898864
No 172
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.70 E-value=2.4e-08 Score=84.91 Aligned_cols=67 Identities=13% Similarity=0.157 Sum_probs=52.9
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|+|+|+|||+||++|+.+. |.++++++. ++.++.|.+ |..
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--------d~~-------------------- 79 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--------TVKFAKVDA--------DNN-------------------- 79 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC--------------------
Confidence 689999999999999999988 888777652 477887764 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 80 -------~~l~~~~~v~~~Pt~~i~-~~G~~~~ 104 (125)
T 1r26_A 80 -------SEIVSKCRVLQLPTFIIA-RSGKMLG 104 (125)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCeEEE
Confidence 136678999999998777 8999874
No 173
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.70 E-value=3.7e-08 Score=82.94 Aligned_cols=72 Identities=13% Similarity=0.054 Sum_probs=53.7
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|.|+|+|||+||+||+.+. +.++.++++.. ....++.++-|.+ |..
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~--~~~~~v~~~~vd~--------~~~-------------------- 81 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQK--RNHLTFVAARIDG--------EKY-------------------- 81 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS--TTTTTEEEEEEET--------TTC--------------------
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhc--ccCCCeEEEEEEc--------ccc--------------------
Confidence 489999999999999999998 88888887531 1123566666552 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
..+.+.|++.++|+++++++.|++
T Consensus 82 -------~~l~~~~~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 82 -------PDVIERMRVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp -------HHHHHHTTCCSSSEEEEECSSCSS
T ss_pred -------HhHHHhcCCccCCEEEEEeCCCCC
Confidence 246678999999999999877764
No 174
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.68 E-value=3.5e-08 Score=78.90 Aligned_cols=69 Identities=16% Similarity=0.188 Sum_probs=52.8
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.+||+|+|+|||+||++|+.+. |.++.++++ ++.++.|.+ |..
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--------~~~------------------- 61 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--------EVEFAKVDV--------DQN------------------- 61 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC-------------------
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--------CCEEEEEec--------cCC-------------------
Confidence 4689999999999999999988 777776651 477887764 210
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|++.++|++++++ +|+++..
T Consensus 62 --------~~~~~~~~v~~~Pt~~~~~-~g~~~~~ 87 (104)
T 2vim_A 62 --------EEAAAKYSVTAMPTFVFIK-DGKEVDR 87 (104)
T ss_dssp --------HHHHHHTTCCSSSEEEEEE-TTEEEEE
T ss_pred --------HHHHHHcCCccccEEEEEe-CCcEEEE
Confidence 1356789999999988775 8988653
No 175
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.68 E-value=2.2e-08 Score=82.84 Aligned_cols=68 Identities=13% Similarity=0.170 Sum_probs=50.1
Q ss_pred ccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeecc
Q 014387 60 VLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYH 137 (425)
Q Consensus 60 ~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~ 137 (425)
..+||+|+|+|||+||++|+.+. |.++++++ ++.++.|.+ |.
T Consensus 30 ~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---------~~~~~~vd~--------~~------------------- 73 (117)
T 2xc2_A 30 QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---------DAIFVKVDV--------DK------------------- 73 (117)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---------SSEEEEEET--------TT-------------------
T ss_pred hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---------CcEEEEEEC--------Cc-------------------
Confidence 34789999999999999999987 66554432 356666653 21
Q ss_pred CcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 138 PSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 138 p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
+ ..+.+.|++.++|+++++ ++|+++.
T Consensus 74 ----~----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 99 (117)
T 2xc2_A 74 ----L----EETARKYNISAMPTFIAI-KNGEKVG 99 (117)
T ss_dssp ----S----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----c----HHHHHHcCCCccceEEEE-eCCcEEE
Confidence 0 146678999999997777 7898874
No 176
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.67 E-value=4.7e-08 Score=80.66 Aligned_cols=68 Identities=21% Similarity=0.240 Sum_probs=53.4
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||.|+|+|||+||++|+.+. |.++.++++ .++.++.|.+ |..
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 73 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERA-------TDLTVAKLDV--------DTN-------------------- 73 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCC--------------------
Confidence 478999999999999999988 888877763 2578888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 74 -------~~~~~~~~i~~~Pt~~~~-~~g~~~~ 98 (121)
T 2i1u_A 74 -------PETARNFQVVSIPTLILF-KDGQPVK 98 (121)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCcCCEEEEE-ECCEEEE
Confidence 135678999999999888 5998875
No 177
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.66 E-value=1.5e-08 Score=93.29 Aligned_cols=69 Identities=7% Similarity=0.052 Sum_probs=54.5
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.+||+|+|+|||+||++|+.+. |.++++++++ ++.++.|.+ |..
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-------~v~~~~vd~--------~~~------------------- 157 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-------LLRIGAVNC--------GDD------------------- 157 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-------TBEEEEEET--------TTC-------------------
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-------ceEEEEEEC--------Ccc-------------------
Confidence 4789999999999999999998 8888888732 477777763 211
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 158 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 182 (210)
T 3apq_A 158 --------RMLCRMKGVNSYPSLFIF-RSGMAAV 182 (210)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-CTTSCCE
T ss_pred --------HHHHHHcCCCcCCeEEEE-ECCCcee
Confidence 135667999999999999 9998743
No 178
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.65 E-value=7.6e-08 Score=90.34 Aligned_cols=68 Identities=6% Similarity=-0.004 Sum_probs=53.7
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcc
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSL 140 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l 140 (425)
+|+|+|+|||+||+||+.+. +.++++++++ ...++.++.|.+ +.+.
T Consensus 30 ~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~----~~~~v~~~~vd~--------~~~~-------------------- 77 (244)
T 3q6o_A 30 RSAWAVEFFASWCGHCIAFAPTWXALAEDVKA----WRPALYLAALDC--------AEET-------------------- 77 (244)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGG----GTTTEEEEEEET--------TSTT--------------------
T ss_pred CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHh----ccCcEEEEEEeC--------Cchh--------------------
Confidence 59999999999999999998 9999999863 124688888874 1110
Q ss_pred cChHHHHHHHHhCCCCCCCeEEEECCC
Q 014387 141 IDRAVIQFIKEEWQFGKKPILVVLDPH 167 (425)
Q Consensus 141 ~D~~~~~~L~~~f~v~~iPtlVvLD~~ 167 (425)
...+.+.|+|.++|+++++++.
T Consensus 78 -----~~~l~~~~~v~~~Pt~~~~~~g 99 (244)
T 3q6o_A 78 -----NSAVCRDFNIPGFPTVRFFXAF 99 (244)
T ss_dssp -----THHHHHHTTCCSSSEEEEECTT
T ss_pred -----hHHHHHHcCCCccCEEEEEeCC
Confidence 1256778999999999999973
No 179
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.65 E-value=4.6e-08 Score=80.19 Aligned_cols=67 Identities=13% Similarity=0.166 Sum_probs=52.2
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+||++||++|+.+. |.++.++++ ++.++.|.+ |..
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--------~~~-------------------- 70 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--------GAIFLKVDV--------DEL-------------------- 70 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS--------------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--------CcEEEEEEc--------ccC--------------------
Confidence 489999999999999999988 877777652 467777763 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 71 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 95 (118)
T 2vm1_A 71 -------KDVAEAYNVEAMPTFLFI-KDGEKVD 95 (118)
T ss_dssp -------HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcCcEEEEE-eCCeEEE
Confidence 135678999999998888 7998875
No 180
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.65 E-value=3.9e-07 Score=84.08 Aligned_cols=151 Identities=9% Similarity=0.038 Sum_probs=87.0
Q ss_pred cCCCEEEEEE----ecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCcee
Q 014387 61 LRRKMVLLLI----SDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYT 134 (425)
Q Consensus 61 LkGK~VlL~F----sAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~a 134 (425)
+++.+++++| ||.||++|+.++ +.++++++.+ ..++.++.|.. |.
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~-----~~~v~~~~vd~--------~~---------------- 69 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVG-----QDKIKLDIYSP--------FT---------------- 69 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHC-----TTTEEEEEECT--------TT----------------
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCC-----CCceEEEEecC--------cc----------------
Confidence 4455677777 688999999998 8888888842 13566666642 11
Q ss_pred eccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcE-EccccchhhhhcCCccCCCCchhHHHhhhhcccceeccccCCC
Q 014387 135 VYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKV-VCPNALHMMWIWGSLAYPFSTAREEALWREETWRLELLVDGLD 213 (425)
Q Consensus 135 V~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkV-v~~na~~~I~~~g~~aFPft~~~~~~L~~~~~w~~~ll~d~~d 213 (425)
...+.+.|+|+++||+++++ +|+. +.-.|... ..++ ... ...+..... . ...++
T Consensus 70 -----------~~~l~~~~~v~~~Ptl~~~~-~~~~~~~~~G~~~-----~~~l--~~~-~~~~~~~~~----~-~~~l~ 124 (229)
T 2ywm_A 70 -----------HKEETEKYGVDRVPTIVIEG-DKDYGIRYIGLPA-----GLEF--TTL-INGIFHVSQ----R-KPQLS 124 (229)
T ss_dssp -----------CHHHHHHTTCCBSSEEEEES-SSCCCEEEESCCC-----TTHH--HHH-HHHHHHHHT----T-CCSCC
T ss_pred -----------cHHHHHHcCCCcCcEEEEEC-CCcccceecCCcc-----HHHH--HHH-HHHHHhccC----C-ccCCC
Confidence 12467889999999999996 3332 22222110 0000 000 011110000 0 00112
Q ss_pred cccccc--ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 214 PVILNW--MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 214 ~~i~~~--~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
...... ...++.+.++|.+. |++|+.+.+.+.++++.. ..+.++.|.-+...
T Consensus 125 ~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~ 179 (229)
T 2ywm_A 125 EKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQ 179 (229)
T ss_dssp HHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCH
T ss_pred HHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCH
Confidence 111111 13456657777667 999999999999997775 46777777766543
No 181
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.64 E-value=5.6e-08 Score=81.93 Aligned_cols=76 Identities=9% Similarity=0.105 Sum_probs=54.8
Q ss_pred CCCEEEEEEecC-------CChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCc
Q 014387 62 RRKMVLLLISDL-------DISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPW 132 (425)
Q Consensus 62 kGK~VlL~FsAs-------WC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW 132 (425)
+||+|+|+|||+ ||+||+.+. |.+++++++ .++.++.|.+ .+.. . |
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~-------~~~~--~---------~ 77 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS-------EGCVFIYCQV-------GEKP--Y---------W 77 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC-------TTEEEEEEEC-------CCHH--H---------H
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC-------CCcEEEEEEC-------CCch--h---------h
Confidence 589999999999 999999998 888777652 2578888875 1211 1 1
Q ss_pred eeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 133 YTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 133 ~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
. |. ...+.+.|++.++|++++++..++++.
T Consensus 78 ~--------d~--~~~~~~~~~i~~~Pt~~~~~~~~~~~g 107 (123)
T 1wou_A 78 K--------DP--NNDFRKNLKVTAVPTLLKYGTPQKLVE 107 (123)
T ss_dssp H--------CT--TCHHHHHHCCCSSSEEEETTSSCEEEG
T ss_pred h--------ch--hHHHHHHCCCCeeCEEEEEcCCceEec
Confidence 1 11 124666799999999999998555553
No 182
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.64 E-value=2.9e-08 Score=92.31 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=53.9
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
++|+|+|+|||+||+||+.+. |.++++++++ ++.++.|.+ |..
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-------~v~~~~vd~--------d~~-------------------- 73 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-------KLTVAKLNI--------DQN-------------------- 73 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TCEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-------CcEEEEEEC--------CCC--------------------
Confidence 579999999999999999998 9999988843 477888774 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|++++++ +|+++.
T Consensus 74 -------~~l~~~~~v~~~Pt~~~~~-~G~~~~ 98 (222)
T 3dxb_A 74 -------PGTAPKYGIRGIPTLLLFK-NGEVAA 98 (222)
T ss_dssp -------TTTGGGGTCCSBSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCCcCCEEEEEE-CCeEEE
Confidence 0234678999999999995 898875
No 183
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.63 E-value=9.1e-08 Score=81.85 Aligned_cols=75 Identities=19% Similarity=0.211 Sum_probs=52.7
Q ss_pred eEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCc
Q 014387 55 RVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPW 132 (425)
Q Consensus 55 ~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW 132 (425)
.......+++.|+|+|||+||++|+.+. |.++.+++++ ++.++.|.+ |..
T Consensus 42 ~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-------~v~~~~vd~--------~~~------------- 93 (140)
T 1v98_A 42 GFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG-------RLKVVKVNV--------DEH------------- 93 (140)
T ss_dssp -------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TEEEEEEET--------TTC-------------
T ss_pred HHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC-------ceEEEEEEC--------CCC-------------
Confidence 3333333444499999999999999998 8888887732 577777764 211
Q ss_pred eeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 133 YTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 133 ~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 94 --------------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 118 (140)
T 1v98_A 94 --------------PGLAARYGVRSVPTLVLF-RRGAPVA 118 (140)
T ss_dssp --------------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------------HHHHHHCCCCccCEEEEE-eCCcEEE
Confidence 135678999999999999 7999874
No 184
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.63 E-value=4.5e-08 Score=79.61 Aligned_cols=69 Identities=17% Similarity=0.294 Sum_probs=52.2
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
.+||+|+|+|||+||++|+.+. |.++.++++ ++.++.|.+ |..
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--------~~~------------------- 68 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--------NVTFLKVDV--------DEL------------------- 68 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--------TTC-------------------
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--------CcEEEEEEc--------ccc-------------------
Confidence 3589999999999999999988 777776651 477777763 211
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|++.++|+++++ ++|+++..
T Consensus 69 --------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (113)
T 1ti3_A 69 --------KAVAEEWNVEAMPTFIFL-KDGKLVDK 94 (113)
T ss_dssp --------HHHHHHHHCSSTTEEEEE-ETTEEEEE
T ss_pred --------HHHHHhCCCCcccEEEEE-eCCEEEEE
Confidence 135567889999999988 79998753
No 185
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.60 E-value=4.1e-08 Score=84.48 Aligned_cols=88 Identities=14% Similarity=0.103 Sum_probs=58.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||.|+|+|||+||+||+.+. |.++.+++. ++.++-|.+ +.. +
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--------~v~~~~vd~--------~~~------------------~- 73 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--------ETKFVKAIV--------NSC------------------I- 73 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--------SEEEEEECC--------SSS------------------C-
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CcEEEEEEh--------hcC------------------c-
Confidence 468999999999999999988 877776651 355555542 110 0
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccccchhhhhcCCccCCCCchhHHHhhhh
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNALHMMWIWGSLAYPFSTAREEALWRE 200 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na~~~I~~~g~~aFPft~~~~~~L~~~ 200 (425)
+.|++.++|++++++ +|+++.+-. .. ..+|.. -|+....+.++.+
T Consensus 74 -----------~~~~i~~~Pt~~~~~-~G~~v~~~~-G~-~~~~~~--~~~~~~l~~~l~~ 118 (135)
T 2dbc_A 74 -----------EHYHDNCLPTIFVYK-NGQIEGKFI-GI-IECGGI--NLKLEELEWKLSE 118 (135)
T ss_dssp -----------SSCCSSCCSEEEEES-SSSCSEEEE-ST-TTTTCT--TCCHHHHHHHHHH
T ss_pred -----------ccCCCCCCCEEEEEE-CCEEEEEEE-eE-EeeCCC--cCCHHHHHHHHHH
Confidence 368999999999997 998875422 11 123333 3455555555544
No 186
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.60 E-value=4.1e-08 Score=82.23 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=54.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++.+++++ .++.++.|.+ |..
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~v~~~~vd~--------d~~-------------------- 77 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAG------DKVGFYKVDV--------DEQ-------------------- 77 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH------HHSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC------CcEEEEEEEC--------cCC--------------------
Confidence 579999999999999999988 8887777643 1478888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|++.++|+++++ ++|+++..
T Consensus 78 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 78 -------SQIAQEVGIRAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp -------HHHHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCeEEee
Confidence 135667899999999988 59988753
No 187
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.59 E-value=2.9e-07 Score=90.03 Aligned_cols=67 Identities=10% Similarity=0.061 Sum_probs=53.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|+|+|+|||+||+||+.+. +.++++++++ .+.|+.|.+ |.+.
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~-------~~~~~~v~~--------d~~~------------------- 79 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG-------VVQVAAVNC--------DLNK------------------- 79 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TSEEEEEET--------TSTT-------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC-------CcEEEEEEc--------cCcc-------------------
Confidence 478999999999999999998 8899888742 488888875 2110
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCC
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHG 168 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~G 168 (425)
...+.+.|+|.++|+++++++.+
T Consensus 80 ------~~~l~~~~~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 80 ------NKALCAKYDVNGFPTLMVFRPPK 102 (298)
T ss_dssp ------THHHHHHTTCCBSSEEEEEECCC
T ss_pred ------CHHHHHhCCCCccceEEEEECCc
Confidence 12567889999999999998643
No 188
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.59 E-value=7e-08 Score=79.75 Aligned_cols=70 Identities=10% Similarity=0.043 Sum_probs=51.5
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
-++|+|+|+|||+||++|+.+. |.++++++++. ....++.++.|.+ +.. +
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~~~~~v~~~~vd~--------~~~-----------~------- 74 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKS--EFKDRVVIAKVDA--------TAN-----------D------- 74 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTS--SCTTSSEEEEEET--------TTS-----------C-------
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhc--ccCCceEEEEEEC--------ccc-----------c-------
Confidence 3689999999999999999998 99999988530 0012577777763 210 0
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
+.+ ++.++|+++++++.|++
T Consensus 75 ----------~~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 ----------VPD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp ----------CSS--CCSSSSEEEEECSSCTT
T ss_pred ----------ccc--ccCcCCeEEEEeCcCCC
Confidence 111 88999999999998873
No 189
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.58 E-value=1.1e-07 Score=86.01 Aligned_cols=67 Identities=7% Similarity=0.055 Sum_probs=51.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|+|++.|||+||+||+... |.++-+++.+ ...|+-|.+ |+. |
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-------~v~f~kVDV--------De~-----------~-------- 85 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-------FCVIYLVDI--------TEV-----------P-------- 85 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-------TEEEEEEET--------TTC-----------C--------
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-------CcEEEEEEC--------CCC-----------H--------
Confidence 358999999999999999977 8888888742 466776664 211 1
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
.++++|+|.++||++++ .+|+.+
T Consensus 86 --------e~a~~y~V~siPT~~fF-k~G~~v 108 (160)
T 2av4_A 86 --------DFNTMYELYDPVSVMFF-YRNKHM 108 (160)
T ss_dssp --------TTTTTTTCCSSEEEEEE-ETTEEE
T ss_pred --------HHHHHcCCCCCCEEEEE-ECCEEE
Confidence 24568999999999888 477776
No 190
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.57 E-value=1.9e-07 Score=85.74 Aligned_cols=72 Identities=7% Similarity=0.039 Sum_probs=53.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+++++++|||+||+||+.+. |.++++++++ ++..++.++.|.+ |..
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~---~~~~~v~~~~vd~--------~~~-------------------- 181 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTK---AGKGKILGDMVEA--------IEY-------------------- 181 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHH---TTCCCEEEEEEEG--------GGC--------------------
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhccc---ccCCcEEEEEEEc--------ccC--------------------
Confidence 456669999999999999998 9999988863 2223677777763 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+.+.
T Consensus 182 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 206 (226)
T 1a8l_A 182 -------PEWADQYNVMAVPKIVIQ-VNGEDRV 206 (226)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCcccCeEEEE-eCCceeE
Confidence 135678999999998777 6888753
No 191
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.55 E-value=1.1e-07 Score=84.00 Aligned_cols=70 Identities=10% Similarity=0.138 Sum_probs=55.5
Q ss_pred CCC-EEEEEEecCCC--hHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeec
Q 014387 62 RRK-MVLLLISDLDI--SQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVY 136 (425)
Q Consensus 62 kGK-~VlL~FsAsWC--~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~ 136 (425)
.++ .|+|+|||.|| +||+... |.++-+++. .++.|+-|.+ |+.
T Consensus 31 ~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~-------~~v~~~KVdv--------De~----------------- 78 (137)
T 2qsi_A 31 HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFP-------GRLVAAEVAA--------EAE----------------- 78 (137)
T ss_dssp TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTST-------TTEEEEEECG--------GGH-----------------
T ss_pred cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHcc-------CCcEEEEEEC--------CCC-----------------
Confidence 444 99999999999 9999987 888887773 2578887763 321
Q ss_pred cCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccc
Q 014387 137 HPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 137 ~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~n 174 (425)
..+..+|+|++|||++++ ++|+++.+-
T Consensus 79 ----------~~la~~ygV~siPTlilF-kdG~~v~~~ 105 (137)
T 2qsi_A 79 ----------RGLMARFGVAVCPSLAVV-QPERTLGVI 105 (137)
T ss_dssp ----------HHHHHHHTCCSSSEEEEE-ECCEEEEEE
T ss_pred ----------HHHHHHcCCccCCEEEEE-ECCEEEEEE
Confidence 256778999999999999 799998653
No 192
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.53 E-value=1.7e-07 Score=98.88 Aligned_cols=72 Identities=7% Similarity=0.067 Sum_probs=56.7
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcc
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSL 140 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l 140 (425)
||+|+|+|||+||+||+.+. +.++++++++ .+.++.|+.|.+ |.+
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~----~~~~v~~~~VD~--------d~d--------------------- 76 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKD----WRPALNLAVLDC--------AEE--------------------- 76 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGG----GTTTEEEEEEET--------TSG---------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhC----cCCcEEEEEEEC--------Ccc---------------------
Confidence 59999999999999999999 9999999964 124688888874 211
Q ss_pred cChHHHHHHHHhCCCCCCCeEEEECC---CCcEE
Q 014387 141 IDRAVIQFIKEEWQFGKKPILVVLDP---HGKVV 171 (425)
Q Consensus 141 ~D~~~~~~L~~~f~v~~iPtlVvLD~---~GkVv 171 (425)
....+.+.|+|.++|+++++++ +|+.+
T Consensus 77 ----~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~ 106 (519)
T 3t58_A 77 ----TNSAVCREFNIAGFPTVRFFQAFTKNGSGA 106 (519)
T ss_dssp ----GGHHHHHHTTCCSBSEEEEECTTCCSCCCE
T ss_pred ----ccHHHHHHcCCcccCEEEEEcCcccCCCce
Confidence 0125678899999999999997 66643
No 193
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.52 E-value=1.8e-07 Score=86.21 Aligned_cols=71 Identities=10% Similarity=0.127 Sum_probs=55.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|+|+|+|||+||++|+.+. |.++.+++++ + ..++.++.|.+ +..
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~---~-~~~v~~~~vd~--------~~~-------------------- 193 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSK---R-SPPIPLAKVDA--------TAE-------------------- 193 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHT---S-SSCCCEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhc---c-CCcEEEEEEEC--------CCC--------------------
Confidence 579999999999999999987 8999999864 1 23577777763 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|++++++ +|+.+.
T Consensus 194 -------~~l~~~~~v~~~Pt~~~~~-~g~~~~ 218 (241)
T 3idv_A 194 -------TDLAKRFDVSGYPTLKIFR-KGRPYD 218 (241)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCcccCEEEEEE-CCeEEE
Confidence 1367789999999999996 577664
No 194
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.50 E-value=2.5e-08 Score=81.54 Aligned_cols=70 Identities=7% Similarity=0.109 Sum_probs=51.4
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+.+. |.++++++++ .+.++.++.|.+ +. .+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~v~~~~vd~--------~~------------------~~- 71 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKA----EGSEIRLAKVDA--------TE------------------ES- 71 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTT----TCCCCBCEEEET--------TT------------------CC-
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhc----cCCcEEEEEEcC--------CC------------------CH-
Confidence 689999999999999999988 8888888753 122455555542 11 00
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
.+.+.|++.++|+++++ ++|+++
T Consensus 72 --------~~~~~~~v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 72 --------DLAQQYGVRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp --------SSHHHHTCCSSSEEEEE-ESSCSS
T ss_pred --------HHHHHCCCCcccEEEEE-eCCCcC
Confidence 24467899999999999 688765
No 195
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.47 E-value=3.3e-08 Score=83.75 Aligned_cols=68 Identities=18% Similarity=0.213 Sum_probs=49.4
Q ss_pred CCCEEEEEEecCCCh--------------HhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHH
Q 014387 62 RRKMVLLLISDLDIS--------------QEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQS 125 (425)
Q Consensus 62 kGK~VlL~FsAsWC~--------------pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~ 125 (425)
+||+|+|+|||+||+ ||+... +.++++++++ ++.++.|.+ |..
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-------~~~~~~vd~--------d~~------ 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-------KLTVAKLNI--------DQN------ 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------------CEEEEEET--------TSC------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-------CeEEEEEEC--------CCC------
Confidence 589999999999999 999988 7777777642 477777764 211
Q ss_pred HHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 126 LQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|+++++|+++++ ++|+++.
T Consensus 79 ---------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 103 (123)
T 1oaz_A 79 ---------------------PGTAPKYGIRGIPTLLLF-KNGEVAA 103 (123)
T ss_dssp ---------------------TTTGGGGTCCBSSEEEEE-ESSSEEE
T ss_pred ---------------------HHHHHHcCCCccCEEEEE-ECCEEEE
Confidence 024568999999999999 9999875
No 196
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.44 E-value=8.5e-08 Score=74.15 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=47.5
Q ss_pred EEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcccC
Q 014387 65 MVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLID 142 (425)
Q Consensus 65 ~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D 142 (425)
+++++|||+|||+|+... |.++.++++ .++.++.|.+ |++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~~----------------------- 44 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFG-------DKIDVEKIDI--------MVD----------------------- 44 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHC-------SSCCEEEECT--------TTC-----------------------
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCC-----------------------
Confidence 468899999999999988 888888873 2588888874 211
Q ss_pred hHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 143 RAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 143 ~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
. .+.+.|++.++|++++ +|++
T Consensus 45 ~----~~~~~~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 45 R----EKAIEYGLMAVPAIAI---NGVV 65 (85)
T ss_dssp G----GGGGGTCSSCSSEEEE---TTTE
T ss_pred H----HHHHhCCceeeCEEEE---CCEE
Confidence 0 2456799999999998 8886
No 197
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.43 E-value=1.1e-07 Score=73.57 Aligned_cols=62 Identities=19% Similarity=0.277 Sum_probs=48.0
Q ss_pred CEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCccc
Q 014387 64 KMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLI 141 (425)
Q Consensus 64 K~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~ 141 (425)
++++++|||+|||+|+... |.++.++++ .++.++.|.+ |++ +
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~~------------------~--- 46 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-------DAVEVEYINV--------MEN------------------P--- 46 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-------SSEEEEEEES--------SSS------------------C---
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-------CceEEEEEEC--------CCC------------------H---
Confidence 5789999999999999988 888887763 2688888874 110 0
Q ss_pred ChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 142 DRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 142 D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
.+.+.|++.++|++++ +|++
T Consensus 47 ------~~~~~~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 47 ------QKAMEYGIMAVPTIVI---NGDV 66 (85)
T ss_dssp ------CTTTSTTTCCSSEEEE---TTEE
T ss_pred ------HHHHHCCCcccCEEEE---CCEE
Confidence 1345789999999998 8887
No 198
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.42 E-value=1.1e-06 Score=86.75 Aligned_cols=151 Identities=11% Similarity=0.074 Sum_probs=86.4
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcc
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSL 140 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l 140 (425)
.+.++|+|++.||++|+... |.++.+++++ .+-+++|.. |..
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~-------~i~f~~vd~--------~~~--------------------- 178 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-------KILFIFIDS--------DHT--------------------- 178 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT-------TCEEEEECT--------TSG---------------------
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccC-------ceEEEEecC--------ChH---------------------
Confidence 36789999999999999988 8888888753 355555531 210
Q ss_pred cChHHHHHHHHhCCCCC--CCeEEEECCCCcEEccccchhhhhcCCccCCCCchhHHHhhhh----------------cc
Q 014387 141 IDRAVIQFIKEEWQFGK--KPILVVLDPHGKVVCPNALHMMWIWGSLAYPFSTAREEALWRE----------------ET 202 (425)
Q Consensus 141 ~D~~~~~~L~~~f~v~~--iPtlVvLD~~GkVv~~na~~~I~~~g~~aFPft~~~~~~L~~~----------------~~ 202 (425)
....+.+.|++++ +|++++++..+....- ....-+++.....+..++ ..
T Consensus 179 ----~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky---------~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~ 245 (361)
T 3uem_A 179 ----DNQRILEFFGLKKEECPAVRLITLEEEMTKY---------KPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 245 (361)
T ss_dssp ----GGHHHHHHTTCCTTTCSEEEEEECC--CCEE---------CCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTT
T ss_pred ----HHHHHHHHcCCCccCCccEEEEEcCCccccc---------CCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcc
Confidence 0124567789987 9999999874432110 000112222222221110 00
Q ss_pred cceeccccCCC-ccccccc-cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCC--CeeEEEeccC
Q 014387 203 WRLELLVDGLD-PVILNWM-AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGI--PLGMVYVGKS 263 (425)
Q Consensus 203 w~~~ll~d~~d-~~i~~~~-~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~--~~Eiv~Vs~d 263 (425)
|....+.. ++ ......+ ..+|.+.++|.+. |++|+++.+.+.++++.... .+-++.|..+
T Consensus 246 ~~~~~v~~-l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 246 WDKQPVKV-LVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp TTTSSSEE-ECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred cccCCcEE-eecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 11000100 00 0111112 4789999999999 99999999999999776544 3555555444
No 199
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.39 E-value=4.9e-07 Score=68.91 Aligned_cols=60 Identities=13% Similarity=0.028 Sum_probs=44.5
Q ss_pred EEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcccCh
Q 014387 66 VLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLIDR 143 (425)
Q Consensus 66 VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~ 143 (425)
+.|+|||+||++|+... |.++.++++ .+++++.| | +
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~-------~~~~~~~v----------~------------------------~- 39 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELG-------IDAEFEKI----------K------------------------E- 39 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTT-------CCEEEEEE----------C------------------------S-
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcC-------CceEEEEe----------c------------------------C-
Confidence 45899999999999988 888877763 24555543 1 0
Q ss_pred HHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 144 AVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 144 ~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|++.++|++++ +|+++..
T Consensus 40 ---~~~~~~~~v~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 40 ---MDQILEAGLTALPGLAV---DGELKIM 63 (77)
T ss_dssp ---HHHHHHHTCSSSSCEEE---TTEEEEC
T ss_pred ---HHHHHHCCCCcCCEEEE---CCEEEEc
Confidence 13456789999999998 8998765
No 200
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.39 E-value=3.2e-07 Score=88.10 Aligned_cols=90 Identities=16% Similarity=0.131 Sum_probs=60.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||+||+... |.++++++. ++.++-|.+ +. .
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--------~v~f~kVd~--------d~--~------------------ 175 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP--------MVKFCKIKA--------SN--T------------------ 175 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--------TSEEEEEEH--------HH--H------------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CCEEEEEeC--------Cc--H------------------
Confidence 489999999999999999998 888887762 355665542 21 0
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccccchhhhhcCCccCCCCchhHHHhhhh
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNALHMMWIWGSLAYPFSTAREEALWRE 200 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na~~~I~~~g~~aFPft~~~~~~L~~~ 200 (425)
.+.+.|++.++||++++. +|+++..- .... ..|+. -|+....+.++.+
T Consensus 176 --------~l~~~~~I~~~PTll~~~-~G~~v~~~-vG~~-~~~g~--~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 176 --------GAGDRFSSDVLPTLLVYK-GGELLSNF-ISVT-EQLAE--EFFTGDVESFLNE 223 (245)
T ss_dssp --------CCTTSSCTTTCSEEEEEE-TTEEEEEE-TTGG-GGSCT--TCCHHHHHHHHHT
T ss_pred --------HHHHHCCCCCCCEEEEEE-CCEEEEEE-eCCc-ccccc--cccHHHHHHHHHH
Confidence 023468999999998885 99987532 2222 12222 2566667766655
No 201
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.73 E-value=4.3e-08 Score=78.12 Aligned_cols=68 Identities=22% Similarity=0.248 Sum_probs=50.7
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|+|+|+|+++|||+|+.+. |.++.+++++ ++.++.|.+ |..
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-------~~~~~~v~~--------~~~-------------------- 62 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-------KVKVVKVNV--------DEN-------------------- 62 (106)
Confidence 478999999999999999988 8888777632 355555542 111
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (106)
T 2yj7_A 63 -------PNTAAQYGIRSIPTLLLF-KNGQVVD 87 (106)
Confidence 124567889999999999 8998764
No 202
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.36 E-value=2.4e-07 Score=81.97 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=53.2
Q ss_pred CCCEEEEEEecCC--ChHhHHHH--HHHHHHHHHhhhccCCCc-eEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeec
Q 014387 62 RRKMVLLLISDLD--ISQEEVII--LEQLYSEARQHQTRHESQ-YEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVY 136 (425)
Q Consensus 62 kGK~VlL~FsAsW--C~pCr~~~--L~~iY~~~k~~~~k~~~~-fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~ 136 (425)
.++.|+|+|||.| |+||+... |.++-+++. .+ +.|+-|.+ |+.
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~-------g~~v~~~KVdv--------De~----------------- 80 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFP-------DYTWQVAIADL--------EQS----------------- 80 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCT-------TSCCEEEECCH--------HHH-----------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcC-------CCeEEEEEEEC--------CCC-----------------
Confidence 5567889999999 99998877 777777663 24 77777753 321
Q ss_pred cCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 137 HPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 137 ~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..|+.+|+|++|||++++ ++|+++.+
T Consensus 81 ----------~~lA~~ygV~sIPTlilF-k~G~~v~~ 106 (140)
T 2qgv_A 81 ----------EAIGDRFGAFRFPATLVF-TGGNYRGV 106 (140)
T ss_dssp ----------HHHHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred ----------HHHHHHcCCccCCEEEEE-ECCEEEEE
Confidence 257788999999999999 79999864
No 203
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.33 E-value=2e-06 Score=73.33 Aligned_cols=70 Identities=13% Similarity=0.238 Sum_probs=54.3
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcc
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSL 140 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l 140 (425)
+|+|+++|+|+|||||+.-. +.++.++ + ++.++.|-+ |+.+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~-------~v~~~~vdV--------de~r-------------------- 66 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--R-------DMDGYYLIV--------QQER-------------------- 66 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H-------TCCEEEEEG--------GGGH--------------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C-------CceEEEEEe--------ecCc--------------------
Confidence 78999999999999999977 7777663 2 477888864 2221
Q ss_pred cChHHHHHHHHhCCCCC-CCeEEEECCCCcEEcc
Q 014387 141 IDRAVIQFIKEEWQFGK-KPILVVLDPHGKVVCP 173 (425)
Q Consensus 141 ~D~~~~~~L~~~f~v~~-iPtlVvLD~~GkVv~~ 173 (425)
+.-..|++.|+|++ .|+++++ ++|+++..
T Consensus 67 ---~~Sn~IA~~~~V~h~sPq~il~-k~G~~v~~ 96 (112)
T 3iv4_A 67 ---DLSDYIAKKTNVKHESPQAFYF-VNGEMVWN 96 (112)
T ss_dssp ---HHHHHHHHHHTCCCCSSEEEEE-ETTEEEEE
T ss_pred ---hhhHHHHHHhCCccCCCeEEEE-ECCEEEEE
Confidence 22346889999995 9999999 89999864
No 204
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.33 E-value=6.8e-07 Score=91.73 Aligned_cols=67 Identities=9% Similarity=0.058 Sum_probs=51.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||.|+|+|||+||+||+.+. |.++++++++ ..++.++.|.+ +..
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-----~~~v~~~~id~--------~~~-------------------- 415 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSK-----DPNIVIAKMDA--------TAN-------------------- 415 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTT-----CSSEEEEEEET--------TSS--------------------
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhcc-----CCCEEEEEEEC--------Cch--------------------
Confidence 389999999999999999998 9999998853 23566666652 110
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGK 169 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~Gk 169 (425)
.+.+.|++.++|+++++++.|+
T Consensus 416 --------~~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 416 --------DVPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp --------CCCTTCCCCSSSEEEEECTTCT
T ss_pred --------hhHhhCCCcccCEEEEEeCCCe
Confidence 0224689999999999998887
No 205
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.30 E-value=1.4e-06 Score=82.64 Aligned_cols=71 Identities=11% Similarity=0.081 Sum_probs=52.5
Q ss_pred ccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeecc
Q 014387 60 VLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYH 137 (425)
Q Consensus 60 ~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~ 137 (425)
.++|++++++|||+|||+|+... |.+++.+++. ++..++.+..|.+ +. +
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~---~~~~~v~~~~vd~--------~~------------------~ 185 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWK---QGNPVILSEAVEA--------YE------------------N 185 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHH---TTCCCEEEEEEET--------TT------------------C
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHccc---ccCCcEEEEEEEC--------cc------------------C
Confidence 46799999999999999999988 8888888742 1113566666653 11 0
Q ss_pred CcccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 138 PSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 138 p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
..+.+.|+|.++|++++ +|+++
T Consensus 186 ---------~~~~~~~~V~~vPt~~i---~G~~~ 207 (243)
T 2hls_A 186 ---------PDIADKYGVMSVPSIAI---NGYLV 207 (243)
T ss_dssp ---------HHHHHHTTCCSSSEEEE---TTEEE
T ss_pred ---------HHHHHHcCCeeeCeEEE---CCEEE
Confidence 13556799999999988 78865
No 206
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.28 E-value=8.6e-08 Score=82.24 Aligned_cols=74 Identities=12% Similarity=0.054 Sum_probs=48.6
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
-+.+.|+|+|||.||++|+.+- +...|..... ...+.|+.|.+.+ .. |
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-----~~~~~l~~vdv~~-------~~-----------~------- 65 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-----GRAAPVQRLQMRD-------PL-----------P------- 65 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-----HHHSCEEEEETTS-------CC-----------C-------
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-----cccceEEEEECCC-------CC-----------c-------
Confidence 3456899999999999999876 3344433211 1236788887521 10 0
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..++..|+|.++||+++++ +|+.+.+
T Consensus 66 --------~~la~~~~V~g~PT~i~f~-~G~ev~R 91 (116)
T 3dml_A 66 --------PGLELARPVTFTPTFVLMA-GDVESGR 91 (116)
T ss_dssp --------TTCBCSSCCCSSSEEEEEE-TTEEEEE
T ss_pred --------hhHHHHCCCCCCCEEEEEE-CCEEEee
Confidence 0133467899999999999 9998873
No 207
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.27 E-value=2.8e-08 Score=82.88 Aligned_cols=33 Identities=9% Similarity=-0.027 Sum_probs=27.1
Q ss_pred eEeccccCCCEEEEEEecCCChHhHHHH--HHHHH
Q 014387 55 RVNLEVLRRKMVLLLISDLDISQEEVII--LEQLY 87 (425)
Q Consensus 55 ~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY 87 (425)
.++++...||.++++|||+|||||+.+. |.++.
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a 38 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAF 38 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGG
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHH
Confidence 4567778899999999999999999986 54444
No 208
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.25 E-value=1.1e-05 Score=87.92 Aligned_cols=148 Identities=6% Similarity=-0.085 Sum_probs=92.0
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcc
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSL 140 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l 140 (425)
++++++.|+|.||++|.... +.++.+++++ ++.|+.|.. +. +
T Consensus 563 ~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~-------~v~~~~vd~--------~~------------------~--- 606 (780)
T 3apo_A 563 DEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG-------LINVGSVDC--------GQ------------------Y--- 606 (780)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TSEEEEEET--------TT------------------T---
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-------CeEEEEEEC--------cc------------------h---
Confidence 46789999999999999987 8888888852 455555542 11 0
Q ss_pred cChHHHHHHHHhCCCCCCCeEEEECCCCc----EEccccchhhhhcCCccCCCCchhHHHhhhhcccceeccccCCCc-c
Q 014387 141 IDRAVIQFIKEEWQFGKKPILVVLDPHGK----VVCPNALHMMWIWGSLAYPFSTAREEALWREETWRLELLVDGLDP-V 215 (425)
Q Consensus 141 ~D~~~~~~L~~~f~v~~iPtlVvLD~~Gk----Vv~~na~~~I~~~g~~aFPft~~~~~~L~~~~~w~~~ll~d~~d~-~ 215 (425)
..+.+.|++++.|+++++.+.++ .+.-++ .+.+.....+...+.. ...+. .++. .
T Consensus 607 ------~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g-----------~~~~~~~l~~fi~~~~--~~~v~-~l~~~~ 666 (780)
T 3apo_A 607 ------HSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNG-----------WNRDAYSLRSWGLGFL--PQASI-DLTPQT 666 (780)
T ss_dssp ------HHHHHHTTCCSSSEEEEECCCSSSCCSCEECCC-----------SCCSHHHHHHHHHTTS--CCCSE-EECHHH
T ss_pred ------HHHHHHcCCCCCCeEEEEcCCCcCccchhhcCC-----------CCCCHHHHHHHHhhhc--ccccc-cCCHHH
Confidence 13556799999999999986543 221111 1122222222222111 00011 0111 1
Q ss_pred ccc-cccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 216 ILN-WMAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 216 i~~-~~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
..+ ....++.+.++|.+. |++|+.+.+.+.++++.....+.++.|..+...
T Consensus 667 ~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~ 719 (780)
T 3apo_A 667 FNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYP 719 (780)
T ss_dssp HHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH
T ss_pred HHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCH
Confidence 111 124678899999888 999999999999998776557888888776544
No 209
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=98.25 E-value=1.6e-06 Score=79.49 Aligned_cols=101 Identities=10% Similarity=0.103 Sum_probs=73.3
Q ss_pred CeEeccc-cCCCEEEEEE-ecCCChHhH-HHH--HHHHHHHH-HhhhccCCCceE-EEEEeccCCCCCCchHHHHHHHHH
Q 014387 54 TRVNLEV-LRRKMVLLLI-SDLDISQEE-VII--LEQLYSEA-RQHQTRHESQYE-VVWLPIVDPNMPWTDNKQKQFQSL 126 (425)
Q Consensus 54 ~~V~ls~-LkGK~VlL~F-sAsWC~pCr-~~~--L~~iY~~~-k~~~~k~~~~fE-IV~IsIvd~s~~w~D~~~~~F~~~ 126 (425)
+.+++++ ++||.|+|+| .+.|||.|. .++ +.+.|.++ ++ .+.+ |+.||. | +....+.|.+-
T Consensus 33 ~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~------~g~~~V~gvS~-D-----~~~~~~~~~~~ 100 (182)
T 1xiy_A 33 TSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKE------NNFDDIYCITN-N-----DIYVLKSWFKS 100 (182)
T ss_dssp EEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT------SCCSEEEEEES-S-----CHHHHHHHHHH
T ss_pred eeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHh------CCCcEEEEEeC-C-----CHHHHHHHHHH
Confidence 7999998 6998777755 567999999 788 99999999 75 3674 999995 2 23445667543
Q ss_pred HhCCCceeeccCcccChHHHHHHHHhCCCC------C-----CCeEEEECCCCcEEccc
Q 014387 127 QSAMPWYTVYHPSLIDRAVIQFIKEEWQFG------K-----KPILVVLDPHGKVVCPN 174 (425)
Q Consensus 127 ~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~------~-----iPtlVvLD~~GkVv~~n 174 (425)
. ... +||.+.|+. ..+.+.|++. + ...++||| +|+|+...
T Consensus 101 ~-~~~----~f~lLsD~~--~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~ 151 (182)
T 1xiy_A 101 M-DIK----KIKYISDGN--SSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMF 151 (182)
T ss_dssp T-TCC----SSEEEECTT--SHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEE
T ss_pred c-CCC----CceEEEeCc--hHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEE
Confidence 2 221 567777864 4788889873 2 46789999 99998654
No 210
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.25 E-value=5.3e-08 Score=81.32 Aligned_cols=67 Identities=10% Similarity=0.129 Sum_probs=50.5
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+||++||++|+.+. |.+++++++ ++.++.|.+ |..
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--------~~~-------------------- 78 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--------GAVFLKVDV--------DEL-------------------- 78 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--------TBCCEECCT--------TTS--------------------
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CCEEEEEec--------cch--------------------
Confidence 589999999999999999987 888777652 356666653 210
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|+++++ ++|+++.
T Consensus 79 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 103 (130)
T 1wmj_A 79 -------KEVAEKYNVEAMPTFLFI-KDGAEAD 103 (130)
T ss_dssp -------GGGHHHHTCCSSCCCCBC-TTTTCCB
T ss_pred -------HHHHHHcCCCccceEEEE-eCCeEEE
Confidence 124567899999998777 8998864
No 211
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.24 E-value=1.2e-06 Score=74.65 Aligned_cols=87 Identities=13% Similarity=0.095 Sum_probs=59.4
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcc
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSL 140 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l 140 (425)
++.|+++|||+||+||+... |.++-+++. ++.++-|.+ |+.
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--------~v~f~kvd~--------d~~--------------------- 65 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--------ETKFVKAIV--------NSC--------------------- 65 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--------TSEEEEEEG--------GGT---------------------
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--------CCEEEEEEh--------HHh---------------------
Confidence 45999999999999999977 777766542 356666652 210
Q ss_pred cChHHHHHHHHhCCCCCCCeEEEECCCCcEEccccchhhhhcCCccCCCCchhHHHhhhh
Q 014387 141 IDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNALHMMWIWGSLAYPFSTAREEALWRE 200 (425)
Q Consensus 141 ~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na~~~I~~~g~~aFPft~~~~~~L~~~ 200 (425)
.+.|+++++||++++ .+|+++.+-. .. ...|+. -|+....|..+.+
T Consensus 66 ---------~~~~~v~~~PT~~~f-k~G~~v~~~~-G~-~~~gg~--~~~~~~le~~L~~ 111 (118)
T 3evi_A 66 ---------IQHYHDNCLPTIFVY-KNGQIEAKFI-GI-IECGGI--NLKLEELEWKLAE 111 (118)
T ss_dssp ---------STTCCGGGCSEEEEE-ETTEEEEEEE-ST-TTTTCS--SCCHHHHHHHHHT
T ss_pred ---------HHHCCCCCCCEEEEE-ECCEEEEEEe-Ch-hhhCCC--CCCHHHHHHHHHH
Confidence 135788999999998 6898886522 11 123433 5777777777654
No 212
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.23 E-value=6.2e-07 Score=84.12 Aligned_cols=90 Identities=14% Similarity=0.123 Sum_probs=58.7
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+||+|+|+|||+||++|+... |.++.+++. ++.++.|.+ + . +
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--------~v~f~~vd~--------~-~----------------~--- 162 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--------MVKFCKIRA--------S-N----------------T--- 162 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--------TSEEEEEEH--------H-H----------------H---
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--------CeEEEEEEC--------C-c----------------H---
Confidence 469999999999999999987 776666541 466666652 2 1 0
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEccccchhhhhcCCccCCCCchhHHHhhhh
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCPNALHMMWIWGSLAYPFSTAREEALWRE 200 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~na~~~I~~~g~~aFPft~~~~~~L~~~ 200 (425)
.+.+.|++.++||++++. +|+++..- ..... .|+. -|+....+.++.+
T Consensus 163 --------~l~~~~~i~~~PTl~~~~-~G~~v~~~-~G~~~-~~g~--~~~~~~Le~~L~~ 210 (217)
T 2trc_P 163 --------GAGDRFSSDVLPTLLVYK-GGELISNF-ISVAE-QFAE--DFFAADVESFLNE 210 (217)
T ss_dssp --------TCSTTSCGGGCSEEEEEE-TTEEEEEE-TTGGG-GSCS--SCCHHHHHHHHHT
T ss_pred --------HHHHHCCCCCCCEEEEEE-CCEEEEEE-eCCcc-cCcc--cCCHHHHHHHHHH
Confidence 123468999999999994 99987532 22222 2222 3555666666554
No 213
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=98.22 E-value=1.6e-06 Score=78.86 Aligned_cols=114 Identities=11% Similarity=0.111 Sum_probs=79.6
Q ss_pred CCCCCcccC-CCC--CeEeccc-cCCCEEEEEEec-CCChHhHHHH--HHHHHHHHHhhhccCCCceE-EEEEeccCCCC
Q 014387 42 DDLLPLVDG-ATK--TRVNLEV-LRRKMVLLLISD-LDISQEEVII--LEQLYSEARQHQTRHESQYE-VVWLPIVDPNM 113 (425)
Q Consensus 42 ~~~~pl~dg-~~g--~~V~ls~-LkGK~VlL~FsA-sWC~pCr~~~--L~~iY~~~k~~~~k~~~~fE-IV~IsIvd~s~ 113 (425)
++.+|.|.- .+| +.+++++ ++||.|+|+|.- .|||.|..++ +.+.|.++++ .+.+ |+.||. |
T Consensus 17 Gd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~------~gv~~VigIS~-D--- 86 (171)
T 2xhf_A 17 GDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKE------EGYHTIACIAV-N--- 86 (171)
T ss_dssp TCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHH------TTCCEEEEEES-S---
T ss_pred cCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C---
Confidence 455664432 334 7999999 599988887765 5899999999 9999999975 2685 999995 2
Q ss_pred CCchHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCC-----------CCCeEEEECCCCcEEccc
Q 014387 114 PWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFG-----------KKPILVVLDPHGKVVCPN 174 (425)
Q Consensus 114 ~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~-----------~iPtlVvLD~~GkVv~~n 174 (425)
+-...++|.+-.. .. .+||.+.|+. ..+.+.|++. ..-.++||| +|+|....
T Consensus 87 --~~~~~~~w~~~~~-~~---~~f~lLSD~~--~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~ 149 (171)
T 2xhf_A 87 --DPFVMAAWGKTVD-PE---HKIRMLADMH--GEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVS 149 (171)
T ss_dssp --CHHHHHHHHHHHC-TT---CCSEEEECTT--SHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred --CHHHHHHHHHhcC-CC---CCeEEEEeCC--chHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEE
Confidence 3445667755322 20 1566677754 4778888863 235678898 99997643
No 214
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.21 E-value=8.6e-07 Score=77.71 Aligned_cols=67 Identities=16% Similarity=0.231 Sum_probs=43.3
Q ss_pred CCEEEEEEecCC--ChHhHHHH--HHHHHHHHHhhhccCCCceE--EEEEeccCCCCCCchHHHHHHHHHHhCCCceeec
Q 014387 63 RKMVLLLISDLD--ISQEEVII--LEQLYSEARQHQTRHESQYE--VVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVY 136 (425)
Q Consensus 63 GK~VlL~FsAsW--C~pCr~~~--L~~iY~~~k~~~~k~~~~fE--IV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~ 136 (425)
.+.|+++|+|+| |+||+... |.++++++ + ++. |+-|.+ |+.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-------~v~~~~~~Vd~--------d~~----------------- 80 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-------QFDWQVAVADL--------EQS----------------- 80 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-------TSCCEEEEECH--------HHH-----------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-------ccceeEEEEEC--------CCC-----------------
Confidence 345788999988 99999887 88887766 3 355 666652 221
Q ss_pred cCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 137 HPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 137 ~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|+|+++||++++ ++|+++.+
T Consensus 81 ----------~~la~~~~V~~iPT~~~f-k~G~~v~~ 106 (142)
T 2es7_A 81 ----------EAIGDRFNVRRFPATLVF-TDGKLRGA 106 (142)
T ss_dssp ----------HHHHHTTTCCSSSEEEEE-SCC----C
T ss_pred ----------HHHHHhcCCCcCCeEEEE-eCCEEEEE
Confidence 246678999999999999 89998753
No 215
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.16 E-value=1.4e-05 Score=80.01 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=53.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|+|+|+|||+||++|+... +.++.+++++... ...++.++-|.+ +.
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~-~~~~v~~~~Vd~--------~~--------------------- 70 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFP-NENQVVFARVDC--------DQ--------------------- 70 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC----CCEEEEEEET--------TT---------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC-CCCceEEEEEEC--------Cc---------------------
Confidence 579999999999999999988 8899988853100 012355555542 21
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
+ ..+.+.|+|+++||++++ ++|+++.
T Consensus 71 --~----~~l~~~~~v~~~Pt~~~f-~~G~~~~ 96 (382)
T 2r2j_A 71 --H----SDIAQRYRISKYPTLKLF-RNGMMMK 96 (382)
T ss_dssp --C----HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred --c----HHHHHhcCCCcCCEEEEE-eCCcEee
Confidence 1 246778999999999987 5788763
No 216
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.15 E-value=1.8e-06 Score=90.11 Aligned_cols=69 Identities=7% Similarity=0.031 Sum_probs=52.0
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCC----CceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeec
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHE----SQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVY 136 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~----~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~ 136 (425)
+|+|+|+|||+||+||+.+. +.++++++++ +.+ .++.++-|.+ |..
T Consensus 42 ~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~---~~g~~~~~~v~f~~VD~--------d~~----------------- 93 (470)
T 3qcp_A 42 LCPWIVLFYNDGCGACRRYASTFSKFAGGLKV---EHGKDALQIATAAAVNC--------ASE----------------- 93 (470)
T ss_dssp GSCEEEEEECTTCHHHHHHHHHHHHHHHTSCC---SSCSSGGGGCEEEEEET--------TTC-----------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhh---hcccccCceEEEEEEEC--------CCC-----------------
Confidence 48999999999999999998 8899888753 111 1466666653 211
Q ss_pred cCcccChHHHHHHHHhCCCCCCCeEEEECCCCc
Q 014387 137 HPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGK 169 (425)
Q Consensus 137 ~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~Gk 169 (425)
..+.+.|+|.++||++++++.|.
T Consensus 94 ----------~~la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 94 ----------VDLCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp ----------HHHHHHTTCCSSCEEEEEEESSC
T ss_pred ----------HHHHHHcCCCccCeEEEEECCCc
Confidence 14667899999999999987664
No 217
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.06 E-value=6.3e-06 Score=75.95 Aligned_cols=63 Identities=10% Similarity=0.033 Sum_probs=47.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+++++++|||+||++|+... |.++.+++ .++.++.|.+ +.
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--------~~v~~~~vd~--------~~--------------------- 177 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--------DYITSKVIDA--------SE--------------------- 177 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--------TTEEEEEEEG--------GG---------------------
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--------CCeEEEEEEC--------CC---------------------
Confidence 456779999999999999988 77777664 1467777653 21
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
+ ..+.+.|++.++|++++ +|++
T Consensus 178 --~----~~l~~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 178 --N----QDLAEQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp --C----HHHHHHTTCCSSSEEEE---GGGT
T ss_pred --C----HHHHHHcCCcccCEEEE---CCEE
Confidence 0 13667899999999998 7774
No 218
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.03 E-value=1.1e-05 Score=71.90 Aligned_cols=71 Identities=17% Similarity=0.254 Sum_probs=48.8
Q ss_pred CCCEEEEEEecCCChHhHHHH---H--HHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeec
Q 014387 62 RRKMVLLLISDLDISQEEVII---L--EQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVY 136 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~---L--~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~ 136 (425)
+||.|+|+|+|.||++|+.+- + .++.+.+++ +|-.|-+.+ +.
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-------~fv~v~~d~--------~~------------------ 87 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-------HFIFWQVYH--------DS------------------ 87 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-------TEEEEEEES--------SS------------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-------CeEEEEEec--------CC------------------
Confidence 489999999999999999874 1 345555543 344444331 11
Q ss_pred cCcccChHHHHHHHHhCCCCCCCeEEEECCC-CcEEc
Q 014387 137 HPSLIDRAVIQFIKEEWQFGKKPILVVLDPH-GKVVC 172 (425)
Q Consensus 137 ~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~-GkVv~ 172 (425)
.+ ...+.+.|++.+.|++++||++ |+.+.
T Consensus 88 ------~~-~~~l~~~y~v~~~P~~~fld~~~G~~l~ 117 (153)
T 2dlx_A 88 ------EE-GQRYIQFYKLGDFPYVSILDPRTGQKLV 117 (153)
T ss_dssp ------HH-HHHHHHHHTCCSSSEEEEECTTTCCCCE
T ss_pred ------Hh-HHHHHHHcCCCCCCEEEEEeCCCCcEee
Confidence 01 1245678999999999999998 87653
No 219
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.02 E-value=1.8e-05 Score=72.45 Aligned_cols=72 Identities=13% Similarity=0.134 Sum_probs=50.1
Q ss_pred CCCEEEEEEec-------CCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCc
Q 014387 62 RRKMVLLLISD-------LDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPW 132 (425)
Q Consensus 62 kGK~VlL~FsA-------sWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW 132 (425)
++..|+++||| .||+||+.+. +.++-++++... .+.++.|+-|.+ |+
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~--~~~~v~f~kvD~--------d~-------------- 91 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQA--PQSLNLFFTVDV--------NE-------------- 91 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHC--TTCCEEEEEEET--------TT--------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhcc--CCCCEEEEEEEC--------cc--------------
Confidence 45689999999 4999999988 888888875211 112344444432 21
Q ss_pred eeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 133 YTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 133 ~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
...+.++|+|+++||++++.+.|..
T Consensus 92 -------------~~~la~~~~I~siPtl~~F~~g~~~ 116 (178)
T 3ga4_A 92 -------------VPQLVKDLKLQNVPHLVVYPPAESN 116 (178)
T ss_dssp -------------CHHHHHHTTCCSSCEEEEECCCCGG
T ss_pred -------------CHHHHHHcCCCCCCEEEEEcCCCCC
Confidence 1256788999999999999776543
No 220
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.02 E-value=8e-06 Score=80.49 Aligned_cols=64 Identities=9% Similarity=0.070 Sum_probs=47.7
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.+|.|+|+|||+||++|+.+. |.++.+++++ ..++.++.|.. +..
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~-----~~~v~~~~vd~--------~~~-------------------- 312 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKD-----HENIVIAKMDS--------TAN-------------------- 312 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-----CSSEEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhcc-----CCcEEEEEEEC--------Ccc--------------------
Confidence 589999999999999999988 9999988854 22455555542 110
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCC
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPH 167 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~ 167 (425)
+ .+.|++.++|+++++++.
T Consensus 313 --~-------~~~~~v~~~Pt~~~~~~~ 331 (361)
T 3uem_A 313 --E-------VEAVKVHSFPTLKFFPAS 331 (361)
T ss_dssp --B-------CSSCCCCSSSEEEEECSS
T ss_pred --c-------hhhcCCcccCeEEEEECC
Confidence 0 135789999999999765
No 221
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.96 E-value=9e-06 Score=83.37 Aligned_cols=67 Identities=7% Similarity=0.066 Sum_probs=50.9
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
+|++|+|+|||+||++|+.+. +.++.+++++ .+.++-|.+ +.
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~-------~v~~~~vd~--------~~--------------------- 63 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG-------IVPLAKVDC--------TA--------------------- 63 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TCCEEEEET--------TT---------------------
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC-------ceEEEEEEC--------CC---------------------
Confidence 348999999999999999998 8888888743 255555542 21
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
+ ..+.+.|+|+++||++++ ++|+++
T Consensus 64 --~----~~l~~~~~v~~~Ptl~~~-~~g~~~ 88 (481)
T 3f8u_A 64 --N----TNTCNKYGVSGYPTLKIF-RDGEEA 88 (481)
T ss_dssp --C----HHHHHHTTCCEESEEEEE-ETTEEE
T ss_pred --C----HHHHHhcCCCCCCEEEEE-eCCcee
Confidence 0 246788999999999988 677644
No 222
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.95 E-value=8.1e-06 Score=67.19 Aligned_cols=68 Identities=18% Similarity=0.138 Sum_probs=41.5
Q ss_pred CCCEEEEEEecCCChHhHHHHHHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCccc
Q 014387 62 RRKMVLLLISDLDISQEEVIILEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLI 141 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~ 141 (425)
+++.|++ |||+|||+|+... .+.+++. ..|+++-|.. +....
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~--~~l~~~~-------~~~~~v~v~~--------~~~~~-------------------- 59 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVK--QLLTQVG-------ASYKVVELDE--------LSDGS-------------------- 59 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHH--HHHHHHT-------CCCEEEEGGG--------STTHH--------------------
T ss_pred cCCCEEE-EECCCChhHHHHH--HHHHHcC-------CCeEEEEccC--------CCChH--------------------
Confidence 4556666 9999999999876 2223332 1355544431 11111
Q ss_pred ChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 142 DRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 142 D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
.....+.+.|++.++|++ ++ +|+++.
T Consensus 60 --~~~~~l~~~~~v~~~Pt~-~~--~g~~v~ 85 (116)
T 2e7p_A 60 --QLQSALAHWTGRGTVPNV-FI--GGKQIG 85 (116)
T ss_dssp --HHHHHHHHHHSCCSSCEE-EE--TTEEEE
T ss_pred --HHHHHHHHHhCCCCcCEE-EE--CCEEEC
Confidence 112357778999999999 44 688775
No 223
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.92 E-value=3.1e-05 Score=71.74 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=55.2
Q ss_pred ccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEe--ccCCCCCCchH------------HHH
Q 014387 58 LEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLP--IVDPNMPWTDN------------KQK 121 (425)
Q Consensus 58 ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~Is--Ivd~s~~w~D~------------~~~ 121 (425)
+..-+||++++.||+.|||+|+.+. |.++.+. ++.|+++. +.... .+. ..+
T Consensus 81 ~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----------~v~v~~~~~p~~~~~---~~s~~~a~a~~~a~d~~~ 147 (216)
T 1eej_A 81 YKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----------GITVRYLAFPRQGLD---SDAEKEMKAIWCAKDKNK 147 (216)
T ss_dssp ECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----------TEEEEEEECCTTCSS---SHHHHHHHHHHTSSSHHH
T ss_pred ecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----------CcEEEEEECCccCCC---chHHHHHHHHHhccCHHH
Confidence 3345789999999999999999998 7775431 36677664 31100 111 123
Q ss_pred HHHHHHhCCCceeeccCcc-cChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 122 QFQSLQSAMPWYTVYHPSL-IDRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 122 ~F~~~~~~mPW~aV~~p~l-~D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
.|.++...-+ ++++.. ........+.+.|++++.|++++.| |+.
T Consensus 148 ~~~~~~~~~~---~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~d--G~~ 192 (216)
T 1eej_A 148 AFDDVMAGKS---VAPASCDVDIADHYALGVQLGVSGTPAVVLSN--GTL 192 (216)
T ss_dssp HHHHHHTTCC---CCCCCCSCCHHHHHHHHHHHTCCSSSEEECTT--SCE
T ss_pred HHHHHHhCCC---CChhHHHHHHHHHHHHHHHcCCCccCEEEEcC--CeE
Confidence 3444332211 121111 1122345788999999999996644 543
No 224
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.87 E-value=3.3e-05 Score=79.88 Aligned_cols=66 Identities=9% Similarity=0.017 Sum_probs=50.8
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.++.|+|+|||+||++|+... +.++.+++++ .++.++-|.+ +..
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~------~~v~~~~vd~--------~~~-------------------- 75 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVE------KNITLAQIDC--------TEN-------------------- 75 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT------TTCEEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcc------CCeEEEEEEC--------CCC--------------------
Confidence 479999999999999999998 8888888743 2466666653 111
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCc
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGK 169 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~Gk 169 (425)
..+.++|+|+++||++++. +|+
T Consensus 76 -------~~l~~~~~v~~~Pt~~~~~-~g~ 97 (504)
T 2b5e_A 76 -------QDLCMEHNIPGFPSLKIFK-NSD 97 (504)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTC
T ss_pred -------HHHHHhcCCCcCCEEEEEe-CCc
Confidence 2467789999999999995 465
No 225
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.84 E-value=1.5e-05 Score=82.52 Aligned_cols=67 Identities=19% Similarity=0.200 Sum_probs=47.9
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.||.|+|+|||+||+||+... +.++.++++. ...++.++-|.. +. .
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~----~~~~v~~~~vd~--------~~---------~----------- 422 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYAN----ATSDVLIAKLDH--------TE---------N----------- 422 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHH----HCSSCEEEEEEG--------GG---------C-----------
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhc----cCCcEEEEEecC--------Cc---------c-----------
Confidence 489999999999999999998 8899988862 112444444431 11 0
Q ss_pred ccChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 140 LIDRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
+ +.. |+++++||++++ ++|+.
T Consensus 423 --~------~~~-~~v~~~Pt~~~~-~~G~~ 443 (504)
T 2b5e_A 423 --D------VRG-VVIEGYPTIVLY-PGGKK 443 (504)
T ss_dssp --C------CSS-CCCSSSSEEEEE-CCTTS
T ss_pred --c------ccc-CCceecCeEEEE-eCCce
Confidence 0 112 789999999999 78865
No 226
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.82 E-value=9.9e-05 Score=65.08 Aligned_cols=35 Identities=9% Similarity=0.025 Sum_probs=29.5
Q ss_pred EeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHH
Q 014387 56 VNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEA 90 (425)
Q Consensus 56 V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~ 90 (425)
..+..-.+|++++.||+.|||+|+.+. |.++++++
T Consensus 15 ~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 51 (175)
T 3gyk_A 15 PVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDAD 51 (175)
T ss_dssp CEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhC
Confidence 344566789999999999999999998 88887764
No 227
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.70 E-value=0.00069 Score=63.89 Aligned_cols=45 Identities=13% Similarity=-0.107 Sum_probs=31.9
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc---C-CCeeEEEeccCCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTA---G-IPLGMVYVGKSNP 265 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~---~-~~~Eiv~Vs~d~~ 265 (425)
..++...+.|.+. |++|++..+.+.+++... + ..+.+.-|.-+..
T Consensus 136 ~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~ 185 (243)
T 2hls_A 136 LKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN 185 (243)
T ss_dssp CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC
T ss_pred cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC
Confidence 3577777766666 999999999999986543 2 4566666655543
No 228
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.62 E-value=5e-05 Score=74.98 Aligned_cols=71 Identities=14% Similarity=0.152 Sum_probs=46.0
Q ss_pred CCCEEEEEEecCCChHhHHHH-----HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeec
Q 014387 62 RRKMVLLLISDLDISQEEVII-----LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVY 136 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~-----L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~ 136 (425)
++++|+|+|||+||+ |+.+. |..+|+++.+.- + +.++.++-|.+ +..
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~-~-~~~v~~~~Vd~--------~~~----------------- 78 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVL-E-HKDIGFVMVDA--------KKE----------------- 78 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHG-G-GSSEEEEEEET--------TTT-----------------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHH-h-hcCcEEEEEeC--------CCC-----------------
Confidence 479999999999999 96442 233344443210 1 12456665542 211
Q ss_pred cCcccChHHHHHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 137 HPSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 137 ~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
..+.++|+|+++||++++ ++|++.
T Consensus 79 ----------~~l~~~~~v~~~Pt~~~~-~~g~~~ 102 (350)
T 1sji_A 79 ----------AKLAKKLGFDEEGSLYVL-KGDRTI 102 (350)
T ss_dssp ----------HHHHHHHTCCSTTEEEEE-ETTEEE
T ss_pred ----------HHHHHhcCCCccceEEEE-ECCcEE
Confidence 146678999999999999 788854
No 229
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.51 E-value=0.00054 Score=61.56 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=34.0
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEecc
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIV 109 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIv 109 (425)
-.||++++.||+.|||+|+.+. |.++.+++. .++.++.+|+.
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~-------~~v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAP-------QDVVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCC-------TTEEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCC-------CCeEEEEEecc
Confidence 4689999999999999999988 766665542 36889999973
No 230
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.47 E-value=7.8e-05 Score=57.81 Aligned_cols=62 Identities=15% Similarity=0.115 Sum_probs=38.5
Q ss_pred EEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcccChH
Q 014387 67 LLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRA 144 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~ 144 (425)
+..||++|||+|+... |.++.+++ +.++.++.+ | .|.. +
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---------~~~~~~~~v-~-----~~~~----------------------~-- 44 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---------KYTVEIVHL-G-----TDKA----------------------R-- 44 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---------TEEEEEEET-T-----TCSS----------------------T--
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---------CCeEEEEEe-c-----CChh----------------------h--
Confidence 4568999999999876 55543322 345555554 1 1100 1
Q ss_pred HHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 145 VIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 145 ~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.|++.++|++++ +|+++.
T Consensus 45 --~~~~~~~gv~~vPt~~i---~g~~~~ 67 (80)
T 2k8s_A 45 --IAEAEKAGVKSVPALVI---DGAAFH 67 (80)
T ss_dssp --HHHHHHHTCCEEEEEEE---TTEEEE
T ss_pred --HHHHHHcCCCcCCEEEE---CCEEEE
Confidence 12345689999999887 788653
No 231
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.45 E-value=0.00025 Score=54.84 Aligned_cols=64 Identities=9% Similarity=0.101 Sum_probs=42.9
Q ss_pred EEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcccChH
Q 014387 67 LLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRA 144 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~ 144 (425)
++.||++|||+|+... |.++..+++ ++++..|.+ +.+..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--------~i~~~~vdi--------~~~~~----------------------- 43 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--------DFQYQYVDI--------RAEGI----------------------- 43 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--------SCEEEEECH--------HHHTC-----------------------
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--------CceEEEEec--------ccChH-----------------------
Confidence 5679999999999877 777665542 477877764 22110
Q ss_pred HHHHHHHhCC--CCCCCeEEEECCCCcEEc
Q 014387 145 VIQFIKEEWQ--FGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 145 ~~~~L~~~f~--v~~iPtlVvLD~~GkVv~ 172 (425)
....+.+.++ +.++|++++ +|+.+.
T Consensus 44 ~~~~l~~~~~~~~~~vP~i~~---~g~~i~ 70 (85)
T 1ego_A 44 TKEDLQQKAGKPVETVPQIFV---DQQHIG 70 (85)
T ss_dssp CSHHHHHHTCCCSCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHhCCCCceeCeEEE---CCEEEE
Confidence 0124666788 899999854 577764
No 232
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.42 E-value=0.00085 Score=61.91 Aligned_cols=90 Identities=13% Similarity=0.131 Sum_probs=51.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEE--eccCCCCCCchH------------HHHHHHH
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWL--PIVDPNMPWTDN------------KQKQFQS 125 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~I--sIvd~s~~w~D~------------~~~~F~~ 125 (425)
.+|++++.||+.|||+|+.+. |.+ +.+ . ++.|+++ |+.... .+. ..+.|.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~-~~~------~---~v~v~~~~~p~~~~~---~~s~~~a~~~~~a~d~~~a~~~ 151 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKE-YND------L---GITVRYLAFPRAGMN---NQTAKQMEAIWTAKDPVFALNE 151 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHH-HHH------T---TEEEEEEECCSSTTC---SHHHHHHHHHHHSSSHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHH-HHh------C---CcEEEEEECCccCCC---chHHHHHHHHHhCcCHHHHHHH
Confidence 578999999999999999998 776 322 1 3666655 531100 111 1123333
Q ss_pred HHhCCCceeeccCcc-cChHHHHHHHHhCCCCCCCeEEEECCCCc
Q 014387 126 LQSAMPWYTVYHPSL-IDRAVIQFIKEEWQFGKKPILVVLDPHGK 169 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l-~D~~~~~~L~~~f~v~~iPtlVvLD~~Gk 169 (425)
++..-+ ++.... ........+.+.+++++.|++++ .+|+
T Consensus 152 ~~~~~~---~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~ 191 (211)
T 1t3b_A 152 AEKGNL---PKEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGE 191 (211)
T ss_dssp HHTTCC---CSSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSC
T ss_pred HHcCCC---CChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCE
Confidence 322211 111110 01122346789999999999988 4676
No 233
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.42 E-value=0.0013 Score=62.07 Aligned_cols=105 Identities=6% Similarity=-0.006 Sum_probs=57.4
Q ss_pred eccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchH--------HH-HHHHH
Q 014387 57 NLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDN--------KQ-KQFQS 125 (425)
Q Consensus 57 ~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~--------~~-~~F~~ 125 (425)
.+..-.+|++++.|++.|||+|+.+. |.++.++ .++.|+++++--....+... +. +.|+.
T Consensus 91 ~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---------g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~ 161 (241)
T 1v58_A 91 LDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS---------GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQ 161 (241)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT---------TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHH
T ss_pred eECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC---------CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHH
Confidence 33344689999999999999999987 6654432 15777777641000010000 11 22222
Q ss_pred HHhCCCceeeccCcccCh------HHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 126 LQSAMPWYTVYHPSLIDR------AVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 126 ~~~~mPW~aV~~p~l~D~------~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
+...+.--.+.-....+. .....+.+.+++++.|++++.|.+|++
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 162 YEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp HHHTTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred HHHHhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 221110000000000011 112356789999999999999988975
No 234
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.30 E-value=0.00056 Score=68.26 Aligned_cols=73 Identities=10% Similarity=0.116 Sum_probs=46.4
Q ss_pred CCCEEEEEEecCCChHhHHHH-HH---HHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeecc
Q 014387 62 RRKMVLLLISDLDISQEEVII-LE---QLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYH 137 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~-L~---~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~ 137 (425)
.+++|+|+|+|+||++|...- |. ..|++....- + +.++.++-|.+ +..
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~-~-~~~v~~~~Vd~--------~~~------------------ 80 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVL-E-DKGVGFGLVDS--------EKD------------------ 80 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHH-T-TTTEEEEEEET--------TTT------------------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHh-h-cCCceEEEEeC--------ccc------------------
Confidence 468999999999999974432 22 3455443211 1 12455555542 111
Q ss_pred CcccChHHHHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 138 PSLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 138 p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..|.++|+|+++||++++. +|+++.
T Consensus 81 ---------~~l~~~~~V~~~PTl~~f~-~G~~~~ 105 (367)
T 3us3_A 81 ---------AAVAKKLGLTEEDSIYVFK-EDEVIE 105 (367)
T ss_dssp ---------HHHHHHHTCCSTTEEEEEE-TTEEEE
T ss_pred ---------HHHHHHcCCCcCceEEEEE-CCcEEE
Confidence 2467789999999999996 687653
No 235
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.19 E-value=0.00031 Score=59.79 Aligned_cols=66 Identities=5% Similarity=0.057 Sum_probs=46.5
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcc
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSL 140 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l 140 (425)
++.|+++|||. |+||+... |.++-++++ .++.++.|.+ |+ +|
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~-------gk~~f~~vd~--------d~------------------~~-- 66 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQR-------GVINFGTIDA--------KA------------------FG-- 66 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSST-------TTSEEEEECT--------TT------------------TG--
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhC-------CeEEEEEEch--------HH------------------hH--
Confidence 57899999999 89999554 666655553 2577888763 21 10
Q ss_pred cChHHHHHHHHhCCCCC--CCeEEEECC-CCcEE
Q 014387 141 IDRAVIQFIKEEWQFGK--KPILVVLDP-HGKVV 171 (425)
Q Consensus 141 ~D~~~~~~L~~~f~v~~--iPtlVvLD~-~GkVv 171 (425)
.+.+.|++++ +|++++++. +|+..
T Consensus 67 -------~~a~~~gi~~~~iPtl~i~~~~~g~~~ 93 (133)
T 2djk_A 67 -------AHAGNLNLKTDKFPAFAIQEVAKNQKF 93 (133)
T ss_dssp -------GGTTTTTCCSSSSSEEEEECTTTCCBC
T ss_pred -------HHHHHcCCCcccCCEEEEEecCcCccc
Confidence 2446789999 999999984 67663
No 236
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.15 E-value=0.0022 Score=57.33 Aligned_cols=40 Identities=10% Similarity=0.024 Sum_probs=32.6
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEec
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
.||++++.|++.|||+|+.+. |.++.+++ +.++.++.+|+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~-------~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKL-------PADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTC-------CTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhC-------CCCeEEEEEeh
Confidence 689999999999999999998 76665554 23688888886
No 237
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=97.13 E-value=0.00066 Score=57.04 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=25.4
Q ss_pred EEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEec
Q 014387 65 MVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 65 ~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
.+++.||+.||++|+... |.++-+++ ++++.-|.|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~---------~i~~~~vDI 66 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS---------WFELEVINI 66 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS---------CCCCEEEET
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc---------CCeEEEEEC
Confidence 568889999999999876 66665543 255666664
No 238
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.04 E-value=0.0017 Score=58.04 Aligned_cols=40 Identities=13% Similarity=-0.118 Sum_probs=33.4
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEec
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
.||++++.||+.|||+|+.+. |.++.+++. .++.+..+|+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~-------~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALP-------SDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSC-------TTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCC-------CceEEEEecc
Confidence 579999999999999999987 887777652 2688888886
No 239
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=96.96 E-value=0.00054 Score=55.10 Aligned_cols=16 Identities=19% Similarity=0.090 Sum_probs=13.8
Q ss_pred EEEEecCCChHhHHHH
Q 014387 67 LLLISDLDISQEEVII 82 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~ 82 (425)
++.|||+||+||+...
T Consensus 3 vv~f~a~~C~~C~~~~ 18 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAV 18 (87)
T ss_dssp EEEEECSSCHHHHHHH
T ss_pred EEEEECCCCchHHHHH
Confidence 5679999999999755
No 240
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.91 E-value=0.0029 Score=56.31 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=33.4
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEec
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
+.+|++++.|++.+||+|..+. |.++.+++. .++.++++|+
T Consensus 23 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~-------~~v~~~~~p~ 65 (193)
T 2rem_A 23 LAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQA-------KDVRFTLVPA 65 (193)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHTSC-------TTEEEEEEEC
T ss_pred CCCCeEEEEEECCCChhHhhhhHHHHHHHHhcC-------CceEEEEeCc
Confidence 4789999999999999999998 776666542 3688888887
No 241
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=96.90 E-value=0.0026 Score=53.37 Aligned_cols=56 Identities=13% Similarity=0.101 Sum_probs=48.1
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC--CCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAG--IPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~--~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|||.+. |++|+.+.+.+.++++... ..+++++|+.|.+.+.++++++.
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~ 83 (144)
T 1o73_A 25 SLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGK 83 (144)
T ss_dssp GGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTT
T ss_pred HhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHh
Confidence 46799999999888 9999999999999966543 68999999999988888887754
No 242
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=96.87 E-value=0.0021 Score=54.44 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=48.3
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC--CCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAG--IPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~--~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|||.+. |++|+.+.+.+.++++... ..+++++|+.|.+.+.++++++.
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~ 83 (146)
T 1o8x_A 25 SLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAK 83 (146)
T ss_dssp GGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTT
T ss_pred HhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHH
Confidence 45799999999888 9999999999999966543 68999999999988888887754
No 243
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=96.84 E-value=0.0022 Score=54.04 Aligned_cols=56 Identities=11% Similarity=0.119 Sum_probs=48.3
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC--CCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAG--IPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~--~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|||.+. |++|+.+.+.+.++++..+ ..+++++|+.|.+.+.++++++.
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~ 83 (144)
T 1i5g_A 25 SLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAK 83 (144)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTT
T ss_pred HcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHh
Confidence 45789999999888 9999999999999976544 68999999999888888887754
No 244
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.83 E-value=0.0015 Score=68.29 Aligned_cols=67 Identities=12% Similarity=0.033 Sum_probs=47.7
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccC
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHP 138 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p 138 (425)
+.+++++..|||+|||||+... |.++-.++ .++.+.-|.+ |. +
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~--------~~v~~~~vd~--------~~------------------~- 159 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQALNLMAVLN--------PRIKHTAIDG--------GT------------------F- 159 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHC--------TTEEEEEEET--------TT------------------C-
T ss_pred cCCCcceEEEECCCCcCcHHHHHHHHHHHhHc--------CceEEEEEec--------hh------------------h-
Confidence 3478899999999999999876 65554332 1456665542 11 1
Q ss_pred cccChHHHHHHHHhCCCCCCCeEEEECCCCcEEcc
Q 014387 139 SLIDRAVIQFIKEEWQFGKKPILVVLDPHGKVVCP 173 (425)
Q Consensus 139 ~l~D~~~~~~L~~~f~v~~iPtlVvLD~~GkVv~~ 173 (425)
..+.+.|++.++|++++ +|+.+..
T Consensus 160 --------~~~~~~~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 160 --------QNEITERNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp --------HHHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred --------HHHHHHhCCCccCEEEE---CCEEEec
Confidence 24677899999999987 8888754
No 245
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.66 E-value=0.002 Score=52.44 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=24.6
Q ss_pred CCCEEEEEEecCCChHhHHHHHHHHHHHHHhhhccCCCceEEEEEec
Q 014387 62 RRKMVLLLISDLDISQEEVIILEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
..+.++++|++.|||+|+... .+.+++. .++++..|.+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~--~~L~~l~-------~~i~~~~vdi 51 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAK--EVLQPYK-------DRFILQEVDI 51 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHH--HHTSTTS-------SSSEEEEEET
T ss_pred CCCCEEEEEeCCCCcchHHHH--HHHHHhh-------hCCeEEEEEC
Confidence 345678889999999998754 2222331 1366666664
No 246
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=96.65 E-value=0.0032 Score=55.17 Aligned_cols=56 Identities=11% Similarity=0.096 Sum_probs=48.3
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC--CCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAG--IPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~--~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|||.+. |++|+.+.+.+.++++... ..+++++|+.|.+.+.++++++.
T Consensus 45 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~ 103 (165)
T 3s9f_A 45 SLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAK 103 (165)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTT
T ss_pred HcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHh
Confidence 45799999999888 9999999999999966533 58999999999998888887754
No 247
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=96.37 E-value=0.0062 Score=51.25 Aligned_cols=56 Identities=11% Similarity=-0.044 Sum_probs=47.3
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|+|.+. |++|+...+.+.++.++. +..++++.|+.|.+.+.++++++.
T Consensus 29 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 86 (143)
T 4fo5_A 29 NQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKI 86 (143)
T ss_dssp CSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHH
T ss_pred HhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHH
Confidence 35889999999888 999999999999996653 357999999999888888877654
No 248
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.26 E-value=0.025 Score=42.95 Aligned_cols=16 Identities=13% Similarity=0.042 Sum_probs=13.5
Q ss_pred EEEEecCCChHhHHHH
Q 014387 67 LLLISDLDISQEEVII 82 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~ 82 (425)
++.|+++|||+|+...
T Consensus 3 v~~f~~~~C~~C~~~~ 18 (81)
T 1h75_A 3 ITIYTRNDCVQCHATK 18 (81)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEcCCCChhHHHHH
Confidence 4569999999999865
No 249
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=96.00 E-value=0.017 Score=48.97 Aligned_cols=56 Identities=13% Similarity=0.085 Sum_probs=46.5
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|+|.+. |++|+...+.+.++.+.. +..++++.|+.|.+.+.++++++.
T Consensus 26 ~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~ 83 (152)
T 2lrn_A 26 DFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEE 83 (152)
T ss_dssp GGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHH
T ss_pred HcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHH
Confidence 35799999999877 999999999999986553 446999999999888888777654
No 250
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=95.99 E-value=0.0086 Score=49.54 Aligned_cols=24 Identities=4% Similarity=-0.021 Sum_probs=17.7
Q ss_pred HHHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 146 IQFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 146 ~~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
...+.+.+++.++|++++ +|+.+.
T Consensus 64 ~~~l~~~~g~~~vP~v~i---~g~~ig 87 (114)
T 2hze_A 64 RDYFEQITGGKTVPRIFF---GKTSIG 87 (114)
T ss_dssp HHHHHHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHHHHHhCCCCcCEEEE---CCEEEe
Confidence 346777889999998754 587763
No 251
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=95.98 E-value=0.017 Score=48.39 Aligned_cols=58 Identities=12% Similarity=0.135 Sum_probs=48.4
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHH---HHHH-cCCCeeEEEeccCCChhHHhhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNA---VAKT-AGIPLGMVYVGKSNPKDRVRRNNDTIA 277 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~---~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i~ 277 (425)
...||.+.|+|-+. |++|+...+.+.+ +.+. .+..++++.|+.|.+.+.++++++...
T Consensus 28 ~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~ 90 (142)
T 3eur_A 28 QFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFA 90 (142)
T ss_dssp TCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSC
T ss_pred HcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcc
Confidence 35789999999777 9999999999999 7443 467899999999999888888776543
No 252
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=95.84 E-value=0.0042 Score=49.97 Aligned_cols=23 Identities=4% Similarity=0.144 Sum_probs=16.7
Q ss_pred HHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 147 QFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 147 ~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.+++.++|++++ +|+.+.
T Consensus 58 ~~l~~~~g~~~vP~i~~---~g~~i~ 80 (105)
T 1kte_A 58 DYLQQLTGARTVPRVFI---GKECIG 80 (105)
T ss_dssp HHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCeEEE---CCEEEe
Confidence 35667789999999754 577664
No 253
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=95.81 E-value=0.02 Score=45.00 Aligned_cols=49 Identities=4% Similarity=-0.128 Sum_probs=41.5
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVR 270 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~ 270 (425)
.++.+.+||.++ |++|+.+.+.+.++++..+..+.++.|.-|+..+-.+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 67 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAA 67 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHH
Confidence 788999999888 9999999999999988777679999999887654433
No 254
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=95.81 E-value=0.021 Score=46.53 Aligned_cols=56 Identities=11% Similarity=-0.029 Sum_probs=46.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|+|.+. |++|+.+.+.+.++.+..+ .++++.|+.|.+.+..+++.+..
T Consensus 22 ~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~ 78 (136)
T 1zzo_A 22 SLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKY 78 (136)
T ss_dssp GGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHT
T ss_pred HhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHc
Confidence 45788888888777 9999999999999977766 89999999998888888776544
No 255
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.80 E-value=0.018 Score=48.40 Aligned_cols=57 Identities=11% Similarity=-0.050 Sum_probs=45.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|||.+. |++|+.+.+.+.++.+. .+..+++++|+.|.+.+..+++++..
T Consensus 25 ~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~ 83 (152)
T 3gl3_A 25 DKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQV 83 (152)
T ss_dssp GGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHS
T ss_pred HhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHc
Confidence 45789999988777 99999999999999654 33459999999998887777766543
No 256
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=95.79 E-value=0.015 Score=48.30 Aligned_cols=56 Identities=11% Similarity=0.015 Sum_probs=46.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc--CCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA--GIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~--~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|||.+. |++|+...+.+.++.+.. +..++++.|+.|.+.+.++++++.
T Consensus 30 ~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~ 88 (148)
T 3fkf_A 30 RFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKK 88 (148)
T ss_dssp TTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHH
T ss_pred ccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHH
Confidence 35789999999877 999999999999997664 456999999999888888877643
No 257
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=95.77 E-value=0.014 Score=48.80 Aligned_cols=66 Identities=14% Similarity=0.196 Sum_probs=38.9
Q ss_pred EEEecCCChHhHHHHHHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcccChHHHH
Q 014387 68 LLISDLDISQEEVIILEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQ 147 (425)
Q Consensus 68 L~FsAsWC~pCr~~~L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~ 147 (425)
+.|+++|||+|+.. |.++.+++. ..++++..|.| |.+.. ..+...
T Consensus 28 vvf~~~~Cp~C~~a-lk~~L~~~~------~~~i~~~~vdi--------d~~~~--------------------~~~~~~ 72 (118)
T 3c1r_A 28 FVASKTYCPYCHAA-LNTLFEKLK------VPRSKVLVLQL--------NDMKE--------------------GADIQA 72 (118)
T ss_dssp EEEECSSCHHHHHH-HHHHHTTSC------CCGGGEEEEEG--------GGSTT--------------------HHHHHH
T ss_pred EEEEcCCCcCHHHH-HHHHHHHcC------CCCCCeEEEEC--------ccCCC--------------------hHHHHH
Confidence 44999999999986 344333331 11255666665 11100 012234
Q ss_pred HHHHhCCCCCCCeEEEECCCCcEE
Q 014387 148 FIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 148 ~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
.|++.+++.++|++++ +|+.+
T Consensus 73 ~l~~~~g~~tvP~vfi---~g~~i 93 (118)
T 3c1r_A 73 ALYEINGQRTVPNIYI---NGKHI 93 (118)
T ss_dssp HHHHHHSCCSSCEEEE---TTEEE
T ss_pred HHHHHhCCCCcCEEEE---CCEEE
Confidence 6777789999998754 67765
No 258
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=95.71 E-value=0.019 Score=50.36 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=52.2
Q ss_pred ccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEE--eccCCCCCCch---------HHHHHHHHH
Q 014387 60 VLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWL--PIVDPNMPWTD---------NKQKQFQSL 126 (425)
Q Consensus 60 ~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~I--sIvd~s~~w~D---------~~~~~F~~~ 126 (425)
.-.||++++.|+..+||.|+.+. |.+ + .++.|+++ |+..-...+.. +..+.|+.+
T Consensus 11 ~~~a~~~vv~f~D~~Cp~C~~~~~~l~~----l--------~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~ 78 (147)
T 3gv1_A 11 RGNGKLKVAVFSDPDCPFCKRLEHEFEK----M--------TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDW 78 (147)
T ss_dssp ETTCCEEEEEEECTTCHHHHHHHHHHTT----C--------CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHH
T ss_pred cCCCCEEEEEEECCCChhHHHHHHHHhh----c--------CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHH
Confidence 34679999999999999999976 432 2 13556654 65111111000 112334432
Q ss_pred Hh--CCCceeeccCccc-ChHHHHHHHHhCCCCCCCeEEEECCCCcE
Q 014387 127 QS--AMPWYTVYHPSLI-DRAVIQFIKEEWQFGKKPILVVLDPHGKV 170 (425)
Q Consensus 127 ~~--~mPW~aV~~p~l~-D~~~~~~L~~~f~v~~iPtlVvLD~~GkV 170 (425)
.. ..|- ..+... .......+.+.++|+++|++++ .+|++
T Consensus 79 ~~~g~~~~---~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~ 120 (147)
T 3gv1_A 79 MRKGKFPV---GGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRT 120 (147)
T ss_dssp HHHCCCCT---TCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCE
T ss_pred HhCCCCCC---ccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEE
Confidence 21 2220 011111 1122347889999999999998 56764
No 259
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=95.65 E-value=0.014 Score=48.45 Aligned_cols=58 Identities=5% Similarity=-0.067 Sum_probs=47.8
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNNDTIA 277 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~~i~ 277 (425)
...||.+.|||.+. |++|+...+.+.++.+.. +..++++.|+.|.+.+..+++++...
T Consensus 28 ~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~ 87 (148)
T 3hcz_A 28 DVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKK 87 (148)
T ss_dssp GCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHT
T ss_pred HcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcC
Confidence 35889999999877 999999999999986543 34699999999988888888776554
No 260
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=95.62 E-value=0.032 Score=48.73 Aligned_cols=23 Identities=13% Similarity=0.120 Sum_probs=17.4
Q ss_pred HHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 147 QFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 147 ~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.+++.++|++++ +|+.+.
T Consensus 92 ~~L~~~~g~~tvP~ifi---~G~~ig 114 (146)
T 2ht9_A 92 DALYKMTGERTVPRIFV---NGTFIG 114 (146)
T ss_dssp HHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCeEEE---CCEEEe
Confidence 45777889999999864 677763
No 261
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=95.60 E-value=0.037 Score=44.73 Aligned_cols=56 Identities=14% Similarity=0.035 Sum_probs=45.4
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEe-----ccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYV-----GKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~V-----s~d~~~e~f~~~~~~ 275 (425)
...||.+.|||.+. |++|+...+.+.++++..+..+.++.| +.+.+.+.++++++.
T Consensus 19 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~ 80 (138)
T 4evm_A 19 DYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKG 80 (138)
T ss_dssp GGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTT
T ss_pred HhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhh
Confidence 35899999999887 999999999999997777788999999 455566666666543
No 262
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=95.58 E-value=0.033 Score=47.33 Aligned_cols=57 Identities=14% Similarity=-0.045 Sum_probs=46.6
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|+|.+. |++|+.+.+.+.++.+.. +..+.++.|+.|.+.+..+++++..
T Consensus 31 ~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~ 89 (165)
T 3or5_A 31 SLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQ 89 (165)
T ss_dssp GGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHH
T ss_pred HcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHc
Confidence 45789999999777 999999999999996553 4569999999998888877776543
No 263
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=95.54 E-value=0.025 Score=47.03 Aligned_cols=56 Identities=11% Similarity=0.078 Sum_probs=45.3
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHH---HHHH-cCCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNA---VAKT-AGIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~---~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|+|.+. |++|+...+.+.+ +.+. .+..++++.|+.|.+.+..+++++.
T Consensus 24 ~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~ 84 (142)
T 3ewl_A 24 RLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVY 84 (142)
T ss_dssp GCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTT
T ss_pred hcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHH
Confidence 35799999999888 9999999998887 5433 3456999999999888888777644
No 264
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=95.53 E-value=0.032 Score=47.11 Aligned_cols=57 Identities=9% Similarity=0.002 Sum_probs=47.6
Q ss_pred ccCCeEEEEEeCCC-cch--HHHHHHHHHHHHHH--cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDW--IRKFTTATNAVAKT--AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w--~r~FT~~l~~~~k~--~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|+|.+. |++ |+...+.+.++.+. .+..++++.|+.|.+.+.++++++..
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~ 91 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRD 91 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHT
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHh
Confidence 45799999999777 999 99999999999655 35569999999999888888877543
No 265
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=95.53 E-value=0.0072 Score=59.25 Aligned_cols=34 Identities=15% Similarity=0.092 Sum_probs=22.3
Q ss_pred eEeccccCCCEEEEEEecCCChHhHHHHHHHHHHHH
Q 014387 55 RVNLEVLRRKMVLLLISDLDISQEEVIILEQLYSEA 90 (425)
Q Consensus 55 ~V~ls~LkGK~VlL~FsAsWC~pCr~~~L~~iY~~~ 90 (425)
...+...-++..++.|+|+|||||+.. ..+++++
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l--~p~le~l 222 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQ--KELFGAA 222 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHH--HHHHGGG
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHH--HHHHHHH
Confidence 344444334445688999999999985 4445554
No 266
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=95.52 E-value=0.03 Score=45.74 Aligned_cols=55 Identities=9% Similarity=0.035 Sum_probs=46.5
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|+|.+. |++|+...+.+.+++++.+ .++++.|+.|.+.+..+++.+.
T Consensus 21 ~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~ 76 (136)
T 1lu4_A 21 SLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSK 76 (136)
T ss_dssp GGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHH
T ss_pred HhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHH
Confidence 35788888888777 9999999999999977766 8999999999888888777654
No 267
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=95.43 E-value=0.029 Score=46.31 Aligned_cols=53 Identities=13% Similarity=-0.052 Sum_probs=43.2
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC-CCeeEEEeccCC---ChhHHhhhhh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAG-IPLGMVYVGKSN---PKDRVRRNND 274 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~-~~~Eiv~Vs~d~---~~e~f~~~~~ 274 (425)
.||.+.|+|.+. |++|+.+.+.+.++++... ..++++.|+.|. +.+..+++.+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~ 90 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIK 90 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHH
Confidence 889999988777 9999999999999976644 689999999986 5555655543
No 268
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.40 E-value=0.057 Score=47.16 Aligned_cols=49 Identities=6% Similarity=0.059 Sum_probs=38.5
Q ss_pred eEeccccCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEec
Q 014387 55 RVNLEVLRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 55 ~V~ls~LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
.+.+..-.+|++++.|+..+||+|+.+. |.++.+++.+ ..++.|++.++
T Consensus 19 ~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~-----~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVK-----SGKVERIIKLF 69 (175)
T ss_dssp SEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEC
T ss_pred CcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhh-----CCcEEEEEEeC
Confidence 4555566889999999999999999988 7788777743 13688888775
No 269
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=95.37 E-value=0.032 Score=46.81 Aligned_cols=56 Identities=14% Similarity=0.060 Sum_probs=46.0
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|||.+. |++|+...+.+.++.+.. +..+.++.|+.|.+.+.++++++.
T Consensus 27 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~ 84 (152)
T 2lja_A 27 DLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTK 84 (152)
T ss_dssp TTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHH
T ss_pred HcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHh
Confidence 35789999999887 999999999999986654 457999999999887777776543
No 270
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=95.36 E-value=0.032 Score=44.04 Aligned_cols=47 Identities=9% Similarity=-0.058 Sum_probs=39.0
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.++|.++ |++|+.+.+.+.++++..+..+.++.|..|...+
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 64 (107)
T 1dby_A 17 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN 64 (107)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH
Confidence 3578888888777 9999999999999987766679999998886544
No 271
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=95.35 E-value=0.033 Score=43.81 Aligned_cols=48 Identities=4% Similarity=-0.067 Sum_probs=39.4
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
...++.+.++|.++ |++|+.+.+.+.++++..+..+.++.|.-|...+
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~ 62 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPE 62 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHH
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHH
Confidence 35678888888887 9999999999999987766678888888876543
No 272
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=95.35 E-value=0.032 Score=47.18 Aligned_cols=54 Identities=13% Similarity=-0.069 Sum_probs=43.8
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
...||.+.|+|.+. |++|+...+.+.++++.. +..++++.|+.|.+ +..+++++
T Consensus 21 ~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~-~~~~~~~~ 76 (151)
T 3raz_A 21 SLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTS-DNIGNFLK 76 (151)
T ss_dssp GCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCH-HHHHHHHH
T ss_pred HhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCh-HHHHHHHH
Confidence 35899999999888 999999999999996653 67899999999853 45555544
No 273
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=95.34 E-value=0.027 Score=48.21 Aligned_cols=54 Identities=6% Similarity=-0.033 Sum_probs=44.7
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
..||.+.|+|.+. |++|+...+.+.++.+.. +..++++.|+.|.+++..+++..
T Consensus 33 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~ 88 (152)
T 2lrt_A 33 LKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSAD 88 (152)
T ss_dssp GGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHT
T ss_pred hCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHh
Confidence 5789999999888 999999999999986543 34699999999988877777653
No 274
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.32 E-value=0.038 Score=48.43 Aligned_cols=57 Identities=11% Similarity=0.001 Sum_probs=44.5
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCC-hhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNP-KDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~-~e~f~~~~~~i 276 (425)
...||.+.|+|.+. |++|+...+.+.++.+.. +..++++.|+.|.+ .+..+++.+..
T Consensus 57 ~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~ 116 (186)
T 1jfu_A 57 DFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEA 116 (186)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHT
T ss_pred HcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHc
Confidence 35789999998777 999999999999996654 37899999999865 35555555443
No 275
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.32 E-value=0.039 Score=46.85 Aligned_cols=23 Identities=13% Similarity=0.120 Sum_probs=17.3
Q ss_pred HHHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 147 QFIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 147 ~~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
..+.+.+++.++|++++ +|+.+.
T Consensus 70 ~~l~~~~g~~~vP~l~i---~G~~ig 92 (130)
T 2cq9_A 70 DALYKMTGERTVPRIFV---NGTFIG 92 (130)
T ss_dssp HHHHHHHSSCCSSEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCEEEE---CCEEEc
Confidence 35677789999999864 677764
No 276
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=94.30 E-value=0.003 Score=52.69 Aligned_cols=55 Identities=15% Similarity=0.205 Sum_probs=45.4
Q ss_pred cCCe-EEEEEeCCC-cchHHHHHHHHHHHHHHc---CCCeeEEEeccCCChhHHhhhhhh
Q 014387 221 AEGR-YICLYGGED-MDWIRKFTTATNAVAKTA---GIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 221 ~egk-~I~lY~g~d-~~w~r~FT~~l~~~~k~~---~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
..|| .+.|||.+. |++|+.+.+.+.++++.. +..+++++|+.|.+.+..+++++.
T Consensus 23 ~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~ 82 (143)
T 2lus_A 23 LKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMME 82 (143)
Confidence 5788 999999888 999999999999885543 468999999999877777776543
No 277
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=95.30 E-value=0.034 Score=44.27 Aligned_cols=47 Identities=13% Similarity=-0.010 Sum_probs=39.4
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.+||.++ |++|+.+.+.+.++++..+..+.++.|.-|...+
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~ 70 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT 70 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH
T ss_pred cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH
Confidence 4688888888888 9999999999999987766669999998886544
No 278
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=95.30 E-value=0.041 Score=43.07 Aligned_cols=46 Identities=9% Similarity=-0.006 Sum_probs=38.9
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
.++.+.+||.++ |++|+.+.+.+.++++..+..+.++.|..|...+
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 65 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECED 65 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHH
Confidence 688889988888 9999999999999987766788999998876543
No 279
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=95.27 E-value=0.039 Score=43.56 Aligned_cols=46 Identities=7% Similarity=-0.087 Sum_probs=38.7
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
..++.+.++|.++ |++|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~ 64 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCT
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCH
Confidence 4688889999888 999999999999998776667888888877544
No 280
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=95.26 E-value=0.051 Score=46.55 Aligned_cols=56 Identities=5% Similarity=0.007 Sum_probs=46.4
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccC------------------CChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKS------------------NPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d------------------~~~e~f~~~~~~i 276 (425)
...||.+.|+|.+. |++|+...+.+.++.+..+ .++++.|+.| .+.+..+++++..
T Consensus 34 ~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (165)
T 3ha9_A 34 NVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANY 108 (165)
T ss_dssp GCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHH
T ss_pred HhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHc
Confidence 35889999988777 9999999999999977766 9999999998 6677777766544
No 281
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=95.26 E-value=0.035 Score=44.30 Aligned_cols=47 Identities=11% Similarity=0.047 Sum_probs=39.3
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..+|.+.++|.++ |++|+.+.+.+.++++..+..+.++.|.-|...+
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 68 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG 68 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH
Confidence 4688888888888 9999999999999987766679999998886544
No 282
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=95.25 E-value=0.06 Score=39.91 Aligned_cols=16 Identities=13% Similarity=-0.016 Sum_probs=13.5
Q ss_pred EEEEecCCChHhHHHH
Q 014387 67 LLLISDLDISQEEVII 82 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~ 82 (425)
++.|+++|||+|+...
T Consensus 3 i~~y~~~~C~~C~~~~ 18 (75)
T 1r7h_A 3 ITLYTKPACVQCTATK 18 (75)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEeCCCChHHHHHH
Confidence 4568999999999865
No 283
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=95.25 E-value=0.038 Score=43.39 Aligned_cols=51 Identities=4% Similarity=-0.074 Sum_probs=41.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVR 270 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~ 270 (425)
+.+++.+.+||.++ |++|+.+.+.+.++++..+..+.++.|..|...+-.+
T Consensus 18 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 69 (109)
T 3tco_A 18 IRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIAD 69 (109)
T ss_dssp HHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHH
T ss_pred HhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHH
Confidence 35689999999888 9999999999999988777688899998886654333
No 284
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=95.24 E-value=0.045 Score=51.89 Aligned_cols=68 Identities=16% Similarity=0.248 Sum_probs=43.7
Q ss_pred CCCEEEEEEec--CCChHhHHHHHHHHHHHHHhhhccCCCceEEEEEeccCCCCCCch--HHHHHHHHHHhCCCceeecc
Q 014387 62 RRKMVLLLISD--LDISQEEVIILEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTD--NKQKQFQSLQSAMPWYTVYH 137 (425)
Q Consensus 62 kGK~VlL~FsA--sWC~pCr~~~L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D--~~~~~F~~~~~~mPW~aV~~ 137 (425)
.++.|+|.|+| +||+ ..-.+.++.+.++. ..++.|+-|.+ | + .+
T Consensus 21 ~~~~vlV~FyA~~pWCg--l~P~~e~lA~~~~~-----~~~v~~akVDv-d------~~g~~------------------ 68 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE--KQDEFKRLAENSAS-----SDDLLVAEVGI-S------DYGDK------------------ 68 (240)
T ss_dssp GCSEEEEEECCSSCCSH--HHHHHHHHHHHHTT-----CTTEEEEEECC-C------CSSSC------------------
T ss_pred CCCCEEEEEeCCCCCCc--chHHHHHHHHHhcC-----CCCeEEEEEeC-C------cccch------------------
Confidence 46899999999 9998 22226666666532 23555665543 1 1 00
Q ss_pred CcccChHHHHHHHHhCCCC--CCCeEEEECCCCc
Q 014387 138 PSLIDRAVIQFIKEEWQFG--KKPILVVLDPHGK 169 (425)
Q Consensus 138 p~l~D~~~~~~L~~~f~v~--~iPtlVvLD~~Gk 169 (425)
....|.+.|+|+ ++||++++ ++|+
T Consensus 69 -------~~~~l~~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 69 -------LNMELSEKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp -------CSHHHHHHTTCCGGGCSEEEEE-ETTC
T ss_pred -------hhHHHHHHcCCCCCCCCEEEEE-eCCC
Confidence 012467889999 99999999 4565
No 285
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=95.21 E-value=0.04 Score=43.24 Aligned_cols=47 Identities=6% Similarity=-0.035 Sum_probs=38.7
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.++|.++ |++|+.+.+.+.++++..+..+.++.|.-+...+
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 65 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPE 65 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCH
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHH
Confidence 4688888888888 9999999999999977666678888888776543
No 286
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=95.20 E-value=0.038 Score=46.51 Aligned_cols=56 Identities=14% Similarity=-0.048 Sum_probs=45.7
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|||.+. |++|+...+.+.++.+.. +..+.++.|+.|.+.+..+++++.
T Consensus 23 ~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~ 80 (151)
T 2f9s_A 23 DLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKS 80 (151)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHH
T ss_pred HcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHH
Confidence 35789999999877 999999999999986543 447999999998887777776654
No 287
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=95.19 E-value=0.035 Score=46.41 Aligned_cols=49 Identities=6% Similarity=-0.103 Sum_probs=41.3
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHH
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRV 269 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f 269 (425)
..|+.+.|||.+. |++|+.+.+.+.++++..+..+.++.|.-|+..+-.
T Consensus 49 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 98 (141)
T 3hxs_A 49 LGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELA 98 (141)
T ss_dssp CCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHH
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHH
Confidence 4789999999888 999999999999998777767999999888665433
No 288
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=95.17 E-value=0.028 Score=46.58 Aligned_cols=47 Identities=15% Similarity=0.060 Sum_probs=40.4
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
..+||.+.|+|.+. |++|+.+.+.+.++++..+..+.++.|.-|...
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~ 86 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE 86 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH
T ss_pred HccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 46899999999888 999999999999997766667899999887654
No 289
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=95.13 E-value=0.042 Score=43.07 Aligned_cols=47 Identities=9% Similarity=-0.063 Sum_probs=39.0
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.+||.++ |++|+.+.+.+.++++..+..+.++.|..|...+
T Consensus 16 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 63 (109)
T 2yzu_A 16 GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPK 63 (109)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHh
Confidence 4678888888887 9999999999999987766678999998876543
No 290
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=95.11 E-value=0.042 Score=42.93 Aligned_cols=46 Identities=4% Similarity=-0.082 Sum_probs=38.0
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
.++.+.++|.+. |++|+.+.+.+.++++..+..+.++.|..|...+
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 63 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG 63 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHH
Confidence 578888888777 9999999999999987766678888888876543
No 291
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=95.08 E-value=0.04 Score=45.03 Aligned_cols=47 Identities=6% Similarity=-0.077 Sum_probs=39.1
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.|||.++ |++|+.+.+.+.++++..+..+.++.|.-|+..+
T Consensus 29 ~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~ 76 (119)
T 1w4v_A 29 NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTD 76 (119)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHH
T ss_pred cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHH
Confidence 4678888888888 9999999999999987766678999998876543
No 292
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=95.05 E-value=0.043 Score=43.43 Aligned_cols=47 Identities=17% Similarity=0.181 Sum_probs=39.7
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.|+|.+. |++|+.+.+.+.++++..+..+.++.|.-|...+
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~ 67 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKT 67 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChh
Confidence 4678889999888 9999999999999987766679999998886553
No 293
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=95.05 E-value=0.055 Score=51.65 Aligned_cols=71 Identities=6% Similarity=0.077 Sum_probs=43.8
Q ss_pred CCCEEEEEEe--cCCChHhHHHHHHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCc
Q 014387 62 RRKMVLLLIS--DLDISQEEVIILEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPS 139 (425)
Q Consensus 62 kGK~VlL~Fs--AsWC~pCr~~~L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~ 139 (425)
.++.|++.|| |+||+ ..-.+.++-++++. ...++.|+-|.+ |+ |
T Consensus 32 ~~~~vlV~Fy~~ApWCg--l~P~~e~lA~~~~~----~~~~v~~akVD~--------d~------------------~-- 77 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE--KHEAFTAFSKSAHK----ATKDLLIATVGV--------KD------------------Y-- 77 (248)
T ss_dssp TSSEEEEEEEESSCCSH--HHHHHHHHHHHHHH----HCSSEEEEEEEE--------CS------------------S--
T ss_pred cCCCEEEEEECCCCCCc--cHHHHHHHHHHHhc----cCCCeEEEEEEC--------Cc------------------c--
Confidence 4689999999 99998 22225555555532 012455555553 11 0
Q ss_pred ccChHHHHHHHHhCCCC--CCCeEEEECCCCcE
Q 014387 140 LIDRAVIQFIKEEWQFG--KKPILVVLDPHGKV 170 (425)
Q Consensus 140 l~D~~~~~~L~~~f~v~--~iPtlVvLD~~GkV 170 (425)
.+. ....|.+.|+|+ ++||++++. |++
T Consensus 78 -g~~-~n~~la~~~~V~~~~~PTl~~F~--G~~ 106 (248)
T 2c0g_A 78 -GEL-ENKALGDRYKVDDKNFPSIFLFK--GNA 106 (248)
T ss_dssp -TTC-TTHHHHHHTTCCTTSCCEEEEES--SSS
T ss_pred -ccc-ccHHHHHHhCCCcCCCCeEEEEe--CCc
Confidence 000 012577889999 999999996 873
No 294
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=95.03 E-value=0.035 Score=44.78 Aligned_cols=45 Identities=7% Similarity=-0.037 Sum_probs=38.3
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
.++.+.|+|.++ |++|+.+.+.+.++++..+..+.++.|.-|...
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~ 61 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQ 61 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCH
Confidence 788999999888 999999999999997776667899999887543
No 295
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=95.00 E-value=0.03 Score=48.18 Aligned_cols=52 Identities=10% Similarity=0.017 Sum_probs=43.4
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
..||.+.|+|.+. |++|+.+.+.+.++.+. .++++.|+.|.+.+..+++++.
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~ 101 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKE 101 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHH
Confidence 5889888888777 99999999999998654 7999999988887777776543
No 296
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=94.99 E-value=0.045 Score=44.15 Aligned_cols=47 Identities=4% Similarity=-0.022 Sum_probs=39.0
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.|||.++ |++|+.+.+.+.++++..+..+.++.|.-+...+
T Consensus 28 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 75 (121)
T 2i1u_A 28 SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPE 75 (121)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHH
Confidence 4678888888888 9999999999999987766678888888876543
No 297
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=94.98 E-value=0.022 Score=50.89 Aligned_cols=52 Identities=19% Similarity=0.195 Sum_probs=42.7
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNN 273 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~ 273 (425)
..|+.+.|+|+|. |+|||...|.+.++++.. .+++++.|+-|...+..+++.
T Consensus 52 ~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~-~~v~~~~v~~d~~~~~~~~~~ 104 (167)
T 1z6n_A 52 IERRYRLLVAGEMWCPDCQINLAALDFAQRLQ-PNIELAIISKGRAEDDLRQRL 104 (167)
T ss_dssp CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-TTEEEEEECHHHHHHHTTTTT
T ss_pred hCCCEEEEEEECCCChhHHHHHHHHHHHHHHC-CCcEEEEEECCCCHHHHHHHH
Confidence 4689999999999 999999999999997664 479999998876666555553
No 298
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=94.97 E-value=0.072 Score=44.72 Aligned_cols=57 Identities=14% Similarity=0.042 Sum_probs=45.2
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCC-hhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNP-KDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~-~e~f~~~~~~i 276 (425)
...||.+.|+|.+. |++|+...+.+.++.+.. +..++++.|+.|.+ .+..+++++..
T Consensus 25 ~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~ 84 (154)
T 3kcm_A 25 DLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKT 84 (154)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHH
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHc
Confidence 35789999988777 999999999999996654 45899999999987 66666655443
No 299
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.87 E-value=0.078 Score=41.34 Aligned_cols=21 Identities=19% Similarity=0.045 Sum_probs=15.2
Q ss_pred HHHHhCCCCCCCeEEEECCCCcEE
Q 014387 148 FIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 148 ~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
.+.+.+++.++|++++ +|+++
T Consensus 58 ~l~~~~g~~~vP~l~~---~g~~i 78 (92)
T 3ic4_A 58 KVHSISGSYSVPVVVK---GDKHV 78 (92)
T ss_dssp HHHHHHSSSCSCEEEE---TTEEE
T ss_pred HHHHhcCCCCcCEEEE---CCEEE
Confidence 4556678889999887 56544
No 300
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=94.83 E-value=0.061 Score=43.60 Aligned_cols=22 Identities=27% Similarity=0.291 Sum_probs=15.5
Q ss_pred HHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 148 FIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 148 ~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
.+.+.++..++|++++ +|+.+.
T Consensus 63 ~l~~~~g~~~vP~v~i---~g~~ig 84 (105)
T 2yan_A 63 GLKAYSNWPTYPQLYV---KGELVG 84 (105)
T ss_dssp HHHHHHTCCSSCEEEE---TTEEEE
T ss_pred HHHHHHCCCCCCeEEE---CCEEEe
Confidence 4556678889999864 577653
No 301
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=94.79 E-value=0.071 Score=46.83 Aligned_cols=56 Identities=7% Similarity=0.033 Sum_probs=44.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCC-------ChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSN-------PKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~-------~~e~f~~~~~~ 275 (425)
...||.+.|+|.+. |++|+.-.+.+.++.+. .+..++++.|+.|. +.+..+++.+.
T Consensus 35 ~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~ 99 (180)
T 3kij_A 35 KYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARK 99 (180)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred HcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHH
Confidence 46899999999877 99999999999999655 34569999999764 56666666544
No 302
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=94.79 E-value=0.049 Score=47.93 Aligned_cols=55 Identities=5% Similarity=-0.104 Sum_probs=45.5
Q ss_pred cccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 219 WMAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 219 ~~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
....||.+.|||.+. |++|+...+.+.++++. .++++.|+-|.+.+..+++++..
T Consensus 54 ~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~ 109 (176)
T 3kh7_A 54 ADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNEL 109 (176)
T ss_dssp GGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHT
T ss_pred HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHc
Confidence 346789999988777 99999999999998655 69999999888888888877553
No 303
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=94.79 E-value=0.051 Score=44.94 Aligned_cols=55 Identities=7% Similarity=-0.015 Sum_probs=42.1
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC-----ChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN-----PKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~-----~~e~f~~~~~ 274 (425)
...||.+.|+|.+. |++|+.+.+.+.++++..+..+.++.|+.|. +.+..+++++
T Consensus 26 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 86 (148)
T 2b5x_A 26 LIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAA 86 (148)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHH
T ss_pred hcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHH
Confidence 45788888888777 9999999999999976544449999999775 4555555543
No 304
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=94.69 E-value=0.06 Score=45.55 Aligned_cols=56 Identities=5% Similarity=-0.123 Sum_probs=44.5
Q ss_pred ccCCeEEEEEeCCC-cchHHHH-HHHHHHHHHHcC-CCeeEEEeccC------CChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKF-TTATNAVAKTAG-IPLGMVYVGKS------NPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~F-T~~l~~~~k~~~-~~~Eiv~Vs~d------~~~e~f~~~~~~ 275 (425)
...||.+.|+|.+. |++|+.. .+.+.++.+..+ ..++++.|+.| .+.+..+++++.
T Consensus 25 ~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~ 89 (158)
T 3eyt_A 25 DLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHE 89 (158)
T ss_dssp GGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHH
T ss_pred HhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHH
Confidence 35799999999777 9999997 999999976644 67999999974 456666666654
No 305
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=94.68 E-value=0.039 Score=45.30 Aligned_cols=42 Identities=14% Similarity=0.116 Sum_probs=37.0
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEec
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVG 261 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs 261 (425)
...||.+.|+|.+. |++|+.+.+.+.++++..+..+.++.|.
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~ 65 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYAR 65 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEE
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 46789999999888 9999999999999987766789999998
No 306
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=94.67 E-value=0.077 Score=42.09 Aligned_cols=48 Identities=10% Similarity=-0.010 Sum_probs=38.4
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHH
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRV 269 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f 269 (425)
..|+.+.++|.++ |++|+.+.+.+.++++..+ .+.++.|..|+..+-.
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~ 72 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVA 72 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHH
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHH
Confidence 3688899988888 9999999999999976644 6888888887654433
No 307
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=94.61 E-value=0.072 Score=41.17 Aligned_cols=46 Identities=9% Similarity=-0.038 Sum_probs=37.6
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.+||.++ |++|+.+.+.+.++++.... +.++.|..|...+
T Consensus 14 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 60 (104)
T 2e0q_A 14 ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPD 60 (104)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH
T ss_pred hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHH
Confidence 4678888888777 99999999999999776544 8888888876544
No 308
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=94.60 E-value=0.061 Score=45.06 Aligned_cols=46 Identities=9% Similarity=-0.057 Sum_probs=38.7
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
..++.+.|+|.+. |++|+.+.+.+.++++..+..+.++.|.-|...
T Consensus 36 ~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~ 82 (136)
T 2l5l_A 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQ 82 (136)
T ss_dssp CCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred cCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCH
Confidence 4678888999888 999999999999998776667888888887654
No 309
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=94.56 E-value=0.051 Score=45.39 Aligned_cols=46 Identities=7% Similarity=-0.085 Sum_probs=39.0
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
..++.+.++|.+. |++|+.+.+.+.++++..+..+.++.|.-|...
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~ 84 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNP 84 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCC
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 4688999999888 999999999999998776667999998877543
No 310
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=94.53 E-value=0.068 Score=42.98 Aligned_cols=46 Identities=2% Similarity=-0.059 Sum_probs=37.3
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
+.++|.+.|+|.+. |++|+.+.+.+.++++... .+.++.|..|...
T Consensus 21 ~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~~ 67 (109)
T 3f3q_A 21 IAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELG 67 (109)
T ss_dssp TTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH
T ss_pred HhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCH
Confidence 46799999999888 9999999999999976643 4777888777543
No 311
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=94.50 E-value=0.068 Score=41.81 Aligned_cols=45 Identities=4% Similarity=0.001 Sum_probs=36.8
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
.++.+.+||.++ |++|+.+.+.+.++++... .+.++.|..|...+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~ 64 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-NVIFLEVDVDDCQD 64 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-TSEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-CeEEEEEEhhhhHH
Confidence 688899999888 9999999999999976643 38888888776544
No 312
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=94.45 E-value=0.1 Score=40.49 Aligned_cols=16 Identities=6% Similarity=0.015 Sum_probs=13.3
Q ss_pred EEEEecCCChHhHHHH
Q 014387 67 LLLISDLDISQEEVII 82 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~ 82 (425)
++.|+++|||+|+...
T Consensus 8 v~~y~~~~C~~C~~~~ 23 (89)
T 2klx_A 8 IILYTRPNCPYCKRAR 23 (89)
T ss_dssp EEEESCSCCTTTHHHH
T ss_pred EEEEECCCChhHHHHH
Confidence 4568999999999865
No 313
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=94.41 E-value=0.065 Score=45.19 Aligned_cols=48 Identities=6% Similarity=-0.062 Sum_probs=40.0
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhH
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDR 268 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~ 268 (425)
..++.+.|+|.+. |++|+.+.+.+.++++..+..+.++.|.-|+..+-
T Consensus 22 ~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l 70 (140)
T 3hz4_A 22 DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWT 70 (140)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHH
T ss_pred hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhH
Confidence 4588899999888 99999999999999877666789999988766443
No 314
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=94.41 E-value=0.072 Score=42.27 Aligned_cols=45 Identities=4% Similarity=-0.115 Sum_probs=37.3
Q ss_pred CeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 223 GRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 223 gk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
++.+.++|.++ |++|+.+.+.+.++++..+..+.++.|..|...+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~ 69 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA 69 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHH
Confidence 78888888888 9999999999999977655578888888876543
No 315
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=94.40 E-value=0.033 Score=50.25 Aligned_cols=41 Identities=10% Similarity=-0.063 Sum_probs=32.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEecc
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIV 109 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIv 109 (425)
.+|++++.|++.|||+|+.+. |.++-+++ ..++.+..+|+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~-------~~~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSF-------KDDMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTC-------CTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHC-------CCCeEEEEecCC
Confidence 489999999999999999987 65554443 236888888873
No 316
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.39 E-value=0.089 Score=39.72 Aligned_cols=16 Identities=0% Similarity=-0.197 Sum_probs=13.0
Q ss_pred EEEEecCCChHhHHHH
Q 014387 67 LLLISDLDISQEEVII 82 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~ 82 (425)
++.|+++|||+|+...
T Consensus 3 i~~y~~~~C~~C~~~~ 18 (82)
T 1fov_A 3 VEIYTKETCPYCHRAK 18 (82)
T ss_dssp EEEEECSSCHHHHHHH
T ss_pred EEEEECCCChhHHHHH
Confidence 3458999999999865
No 317
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=94.37 E-value=0.058 Score=42.84 Aligned_cols=46 Identities=9% Similarity=0.024 Sum_probs=37.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
+.+++.+.+||.++ |++|+.+.+.+.++++.. ..+.++.|.-|...
T Consensus 15 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~~~ 61 (105)
T 4euy_A 15 IEEQQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQDMQ 61 (105)
T ss_dssp TTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECCC-
T ss_pred HhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCCCH
Confidence 35789999999988 999999999999997765 36888888877553
No 318
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=94.35 E-value=0.073 Score=43.15 Aligned_cols=47 Identities=6% Similarity=-0.173 Sum_probs=39.0
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.++|.++ |++|+.+.+.+.++++..+..+.++.|.-+...+
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 66 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ 66 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHH
Confidence 4678899999888 9999999999999977766678888888876543
No 319
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=94.34 E-value=0.048 Score=45.82 Aligned_cols=55 Identities=11% Similarity=0.000 Sum_probs=44.2
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|+|.+. |++|+.+.+.+.++.+. ..++++.|+.|.+.+..+++.+..
T Consensus 39 ~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~ 94 (156)
T 1kng_A 39 AFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRY 94 (156)
T ss_dssp GGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHH
T ss_pred HhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHc
Confidence 35688888888777 99999999999988544 569999999888887777766543
No 320
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=94.34 E-value=0.091 Score=43.49 Aligned_cols=46 Identities=11% Similarity=-0.032 Sum_probs=37.6
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.+||.+. |++|+.+.+.+.++++... .+.++.|..|...+
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~ 82 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKS 82 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHH
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHH
Confidence 3689999999888 9999999999999977654 68888888775543
No 321
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=94.31 E-value=0.082 Score=41.14 Aligned_cols=44 Identities=18% Similarity=0.135 Sum_probs=36.0
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
.++.+.++|.++ |++|+.+.+.+.++++... .+.++.|..|...
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~ 62 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNE 62 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCH
Confidence 688888888777 9999999999999976654 6888888877543
No 322
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=94.25 E-value=0.012 Score=53.91 Aligned_cols=44 Identities=5% Similarity=-0.011 Sum_probs=31.3
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEec
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
..+|++++.||+.|||+|+.+- | .+.+++.+ +.+.++.|+.+++
T Consensus 111 ~~~~~~vveFf~~~C~~C~~~~p~~-~~~~~l~~---~~~~~v~~~~~~v 156 (197)
T 1un2_A 111 VAGAPQVLEFFSFFCPHCYQFEEVL-HISDNVKK---KLPEGVKMTKYHV 156 (197)
T ss_dssp CTTCCSEEEEECTTCHHHHHHHHTS-CHHHHHTT---SSCTTCCEEEEEC
T ss_pred CCCCCEEEEEECCCChhHHHhCccc-ccHHHHHH---HCCCCCEEEEecc
Confidence 4578999999999999999987 4 11134432 1224688888887
No 323
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=94.19 E-value=0.069 Score=45.34 Aligned_cols=55 Identities=11% Similarity=0.060 Sum_probs=42.4
Q ss_pred ccCCeEEEEEeCCC-cch-HHHHHHHHHHHHHHcC-----CCeeEEEeccCCC---hhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDW-IRKFTTATNAVAKTAG-----IPLGMVYVGKSNP---KDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w-~r~FT~~l~~~~k~~~-----~~~Eiv~Vs~d~~---~e~f~~~~~ 274 (425)
...||.+.|||.+. |++ |+...+.+.++.++.+ ..+++++|+-|.. .+..+++.+
T Consensus 20 ~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~ 84 (164)
T 2ggt_A 20 DYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVK 84 (164)
T ss_dssp GGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHH
T ss_pred HcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHH
Confidence 35799999999877 998 9999999999854422 4899999998863 445555553
No 324
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=94.13 E-value=0.057 Score=47.26 Aligned_cols=57 Identities=7% Similarity=-0.046 Sum_probs=44.7
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCe------eEEEeccCC-ChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPL------GMVYVGKSN-PKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~------Eiv~Vs~d~-~~e~f~~~~~~i 276 (425)
...||.+.|+|.+. |++|+...+.+.++.+.. +..+ +++.|+-|. +.+..+++++..
T Consensus 56 ~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~ 121 (183)
T 3lwa_A 56 DFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDN 121 (183)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHT
T ss_pred HhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHc
Confidence 35789999999777 999999999999985442 2235 999999998 778888876554
No 325
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.07 E-value=0.07 Score=43.75 Aligned_cols=45 Identities=7% Similarity=-0.109 Sum_probs=36.8
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC----CCeeEEEeccCCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAG----IPLGMVYVGKSNP 265 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~----~~~Eiv~Vs~d~~ 265 (425)
..++.+.|+|.+. |++|+.+.+.+.++++... ..+.++.|..+..
T Consensus 23 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 72 (133)
T 1x5d_A 23 DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN 72 (133)
T ss_dssp TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC
T ss_pred cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC
Confidence 4578999999888 9999999999999865543 6788888887754
No 326
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=94.05 E-value=0.085 Score=44.77 Aligned_cols=44 Identities=5% Similarity=-0.117 Sum_probs=37.1
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKS 263 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d 263 (425)
...||.+.|+|.+. |++|+.+.+.+.++++. .+..+++|.|+.|
T Consensus 35 ~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~ 80 (164)
T 2h30_A 35 LKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASP 80 (164)
T ss_dssp CCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECT
T ss_pred HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcC
Confidence 46889999999888 99999999999998654 2456999999875
No 327
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=94.04 E-value=0.1 Score=44.46 Aligned_cols=55 Identities=7% Similarity=0.038 Sum_probs=42.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCC-------ChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSN-------PKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~-------~~e~f~~~~~ 274 (425)
...||.+.|+|.+. |++|+...+.+.++.++. +..++++.|+.|. +.+..+++++
T Consensus 29 ~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~ 92 (170)
T 2p5q_A 29 IFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVC 92 (170)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHH
T ss_pred HhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHH
Confidence 35799999999877 999999999999996543 3469999999863 4556666554
No 328
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=94.04 E-value=0.093 Score=42.50 Aligned_cols=45 Identities=11% Similarity=-0.033 Sum_probs=36.4
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
.++.+.++|.++ |++|+.+.+.+.++++.... +.++.|.-|...+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~ 78 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKP 78 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHH
Confidence 588888888888 99999999999999766443 8888888776543
No 329
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=94.03 E-value=0.049 Score=48.40 Aligned_cols=55 Identities=4% Similarity=0.073 Sum_probs=43.4
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccC-------CChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKS-------NPKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d-------~~~e~f~~~~~ 274 (425)
...||.+.|+|.+. |++|+...+.|.++.++ .+..++++.|+.| .+.+..+++++
T Consensus 43 ~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~ 106 (187)
T 3dwv_A 43 QHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVC 106 (187)
T ss_dssp GGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCC
T ss_pred HhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHH
Confidence 36899999999888 99999999999999655 3446999999987 34556665553
No 330
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=94.02 E-value=0.092 Score=44.40 Aligned_cols=50 Identities=10% Similarity=-0.033 Sum_probs=42.1
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHH
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRV 269 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f 269 (425)
+..++.+.|+|.++ |++|+.+.+.+.++++..+..+.++.|..|...+-.
T Consensus 52 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~ 102 (148)
T 3p2a_A 52 LQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALS 102 (148)
T ss_dssp TTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHH
T ss_pred HhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHH
Confidence 46789999999888 999999999999998877777999999888665433
No 331
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=94.01 E-value=0.072 Score=43.40 Aligned_cols=45 Identities=4% Similarity=-0.018 Sum_probs=37.3
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
.+|.+.|+|.+. |++|+.+.+.+.++++.... +.++.|.-|...+
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~ 75 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQD 75 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH
Confidence 789999999888 99999999999999766443 8888888876543
No 332
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=94.01 E-value=0.03 Score=46.46 Aligned_cols=43 Identities=9% Similarity=0.003 Sum_probs=36.4
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHH--HHHHHcCCCeeEEEeccC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATN--AVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~--~~~k~~~~~~Eiv~Vs~d 263 (425)
.+||.+.|||+++ |++|+.+.+.+. ++++..+..+.++.|.-+
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~ 72 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVG 72 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCC
Confidence 5799999999999 999999999999 776655457889998873
No 333
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=93.99 E-value=0.1 Score=45.90 Aligned_cols=56 Identities=4% Similarity=0.016 Sum_probs=43.6
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCC-------ChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSN-------PKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~-------~~e~f~~~~~~ 275 (425)
...||.+.|+|.+. |++|+...+.+.+++++ .+..++++.|+.|. +.+..+++++.
T Consensus 46 ~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~ 110 (181)
T 2p31_A 46 KYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARR 110 (181)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred HcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHh
Confidence 35799999999877 99999999999999654 34469999999874 45666665543
No 334
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=93.99 E-value=0.1 Score=41.33 Aligned_cols=46 Identities=9% Similarity=-0.069 Sum_probs=37.4
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.++|.++ |++|+.+.+.+.++++.. ..+.++.|.-|...+
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~ 65 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQG 65 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCHH
Confidence 4688999999888 999999999999997765 457788887775543
No 335
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=93.95 E-value=0.11 Score=42.53 Aligned_cols=22 Identities=18% Similarity=0.143 Sum_probs=15.7
Q ss_pred HHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 148 FIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 148 ~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
.+.+.++..++|++++ +|+.+-
T Consensus 64 ~l~~~~g~~tvP~ifi---~g~~ig 85 (113)
T 3rhb_A 64 VLERLTGQHTVPNVFV---CGKHIG 85 (113)
T ss_dssp HHHHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHHHhCCCCcCEEEE---CCEEEc
Confidence 4556678889999865 677663
No 336
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=93.95 E-value=0.11 Score=41.66 Aligned_cols=46 Identities=7% Similarity=0.023 Sum_probs=37.5
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
+..|+.+.+||.++ |++|+.+.+.+.++++... .+.++.|.-+...
T Consensus 23 ~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~ 69 (112)
T 1syr_A 23 ISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVS 69 (112)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTH
T ss_pred HccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCH
Confidence 35788999999888 9999999999999976643 5888888877554
No 337
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=93.95 E-value=0.084 Score=42.78 Aligned_cols=43 Identities=12% Similarity=0.292 Sum_probs=34.2
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN 264 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~ 264 (425)
+..|+.+.+||++. |++|+.+.|.+.++++..+ ..++++.-+.
T Consensus 26 ~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~--~~v~~~~~~~ 69 (118)
T 1zma_A 26 LDKKETATFFIGRKTCPYCRKFAGTLSGVVAETK--AHIYFINSEE 69 (118)
T ss_dssp HHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC--CCCEEEETTC
T ss_pred HhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcC--CeEEEEECCC
Confidence 45678899999988 9999999999999976655 4567775554
No 338
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=93.90 E-value=0.099 Score=42.79 Aligned_cols=44 Identities=5% Similarity=-0.054 Sum_probs=37.0
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
.++.+.++|.+. |++|+.+.+.+.++++.. ..+.++.|.-|...
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~ 66 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNG 66 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCH
Confidence 588899999888 999999999999997775 67888888877543
No 339
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=93.84 E-value=0.11 Score=43.76 Aligned_cols=57 Identities=4% Similarity=-0.033 Sum_probs=44.7
Q ss_pred ccCCeEEEEEeCCC-cchHHHH-HHHHHHHHHHcC-CCeeEEEeccC------CChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKF-TTATNAVAKTAG-IPLGMVYVGKS------NPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~F-T~~l~~~~k~~~-~~~Eiv~Vs~d------~~~e~f~~~~~~i 276 (425)
...||.+.|+|.+. |++|+.. .+.+.++.+..+ ..++++.|+.| .+.+..+++++..
T Consensus 27 ~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~ 92 (160)
T 3lor_A 27 DLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEF 92 (160)
T ss_dssp HHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHT
T ss_pred HhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHc
Confidence 35799999999887 9999995 999999976643 46999999973 5667777766543
No 340
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=93.77 E-value=0.11 Score=46.11 Aligned_cols=54 Identities=4% Similarity=0.067 Sum_probs=42.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCC-------ChhHHhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSN-------PKDRVRRNN 273 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~-------~~e~f~~~~ 273 (425)
...||.+.|+|.+. |++|+...+.+.++.++. +..++++.|+.|. +.+..++++
T Consensus 45 ~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~ 107 (190)
T 2vup_A 45 QHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFV 107 (190)
T ss_dssp GGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHH
T ss_pred HcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHH
Confidence 35899999999888 999999999999986543 3469999999873 455666655
No 341
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=93.70 E-value=0.096 Score=42.91 Aligned_cols=47 Identities=6% Similarity=-0.098 Sum_probs=38.6
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.|+|.+. |++|+.+.+.+.++++..+..+.++.|.-|...+
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 80 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQS 80 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHH
T ss_pred cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHH
Confidence 4678899999888 9999999999999987766668888888776543
No 342
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=93.65 E-value=0.13 Score=44.10 Aligned_cols=55 Identities=13% Similarity=0.089 Sum_probs=42.8
Q ss_pred ccCCeEEEEEeCCC-cch-HHHHHHHHHHHHHHc-----CCCeeEEEeccCC---ChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDW-IRKFTTATNAVAKTA-----GIPLGMVYVGKSN---PKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w-~r~FT~~l~~~~k~~-----~~~~Eiv~Vs~d~---~~e~f~~~~~ 274 (425)
...||.+.|||.+. |++ |+...+.+.++.+.. +..+++++|+-|. +.+..+++.+
T Consensus 23 ~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~ 87 (171)
T 2rli_A 23 DFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQ 87 (171)
T ss_dssp TTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHH
T ss_pred HhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHH
Confidence 45799999999877 999 999999999985543 3689999999883 3455555554
No 343
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=93.62 E-value=0.12 Score=42.09 Aligned_cols=47 Identities=4% Similarity=-0.047 Sum_probs=37.5
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
+..||.+.++|.+. |++|+.+.+.+.+++++... +.++.|.-|...+
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~ 74 (114)
T 2oe3_A 27 IKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPD 74 (114)
T ss_dssp HHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHH
T ss_pred HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH
Confidence 35688999999888 99999999999999776443 8888887775543
No 344
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=93.60 E-value=0.091 Score=44.94 Aligned_cols=44 Identities=16% Similarity=0.072 Sum_probs=38.0
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
.++.+.++|.++ |++|+.+.|.+.+++++.+..+.++.|.-|..
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~ 66 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEV 66 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccC
Confidence 589999999999 99999999999999877666788888877743
No 345
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=93.56 E-value=0.12 Score=41.17 Aligned_cols=45 Identities=16% Similarity=0.034 Sum_probs=36.3
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
.++.+.++|.++ |++|+.+.+.+.++++..+ .+.++.|..|+..+
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~ 72 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKD 72 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHH
Confidence 578888888888 9999999999999976644 67888887775543
No 346
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=93.32 E-value=0.35 Score=39.06 Aligned_cols=15 Identities=0% Similarity=-0.325 Sum_probs=12.9
Q ss_pred EEEecCCChHhHHHH
Q 014387 68 LLISDLDISQEEVII 82 (425)
Q Consensus 68 L~FsAsWC~pCr~~~ 82 (425)
..|+++|||+|+.-.
T Consensus 19 ~vy~~~~Cp~C~~ak 33 (99)
T 3qmx_A 19 EIYTWSTCPFCMRAL 33 (99)
T ss_dssp EEEECTTCHHHHHHH
T ss_pred EEEEcCCChhHHHHH
Confidence 359999999999876
No 347
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=93.32 E-value=0.11 Score=41.38 Aligned_cols=45 Identities=9% Similarity=0.173 Sum_probs=34.4
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCCh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPK 266 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~ 266 (425)
.++.+.++|.++ |++|+.+.+.+.++++.. ...+.++.|.-+...
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 66 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS 66 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH
Confidence 488999999888 999999999999986552 345888888877654
No 348
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=93.31 E-value=0.099 Score=39.29 Aligned_cols=40 Identities=5% Similarity=-0.086 Sum_probs=32.1
Q ss_pred EEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 227 CLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 227 ~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
.++|++. |++|+.+.+.+.+++++.+..++++.|.-|.+.
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~ 45 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDR 45 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCG
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 3556566 999999999999997776667888888887654
No 349
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=93.26 E-value=0.099 Score=43.41 Aligned_cols=46 Identities=13% Similarity=0.172 Sum_probs=36.1
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC---CCeeEEEeccCCC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAG---IPLGMVYVGKSNP 265 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~---~~~Eiv~Vs~d~~ 265 (425)
+..++.+.|+|.+. |++|+.+.+.+.++++... ..+.++.|..++.
T Consensus 31 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~ 80 (140)
T 2dj1_A 31 VADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA 80 (140)
T ss_dssp HTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC
T ss_pred HhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc
Confidence 45789999999888 9999999999999865432 3477777776654
No 350
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=93.14 E-value=0.17 Score=39.35 Aligned_cols=16 Identities=0% Similarity=-0.093 Sum_probs=13.1
Q ss_pred EEEEecCCChHhHHHH
Q 014387 67 LLLISDLDISQEEVII 82 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~ 82 (425)
++.|+++|||+|+...
T Consensus 8 v~ly~~~~C~~C~~~~ 23 (92)
T 2khp_A 8 VIIYTRPGCPYCARAK 23 (92)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEECCCChhHHHHH
Confidence 4568999999999755
No 351
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=93.11 E-value=0.14 Score=44.30 Aligned_cols=47 Identities=9% Similarity=-0.057 Sum_probs=39.2
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.+||.+. |++|+.|.+.+.++++.....+.++.|.-|...+
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~ 109 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPA 109 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTH
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHH
Confidence 5788899999888 9999999999999987766668888888876543
No 352
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=93.07 E-value=0.15 Score=43.97 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=38.1
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
.+++.+.|+|.+. |++|+.+.+.+.+++++.+..+.++.|.-|..
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~ 66 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQT 66 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTC
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcC
Confidence 4689999999999 99999999999999776666688888877654
No 353
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=93.06 E-value=0.13 Score=41.42 Aligned_cols=43 Identities=5% Similarity=-0.063 Sum_probs=35.1
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
.++.+.++|.++ |++|+.+.+.+.++++.. .+.++.|.-|...
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~ 75 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLE 75 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccH
Confidence 688899999888 999999999999987654 6777777776543
No 354
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=92.90 E-value=0.22 Score=42.31 Aligned_cols=45 Identities=11% Similarity=0.050 Sum_probs=38.4
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSN 264 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~ 264 (425)
...||.+.|||.+. |++|+...+.+.++.+.. +..+.++.|+.|.
T Consensus 38 ~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 38 QYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred HhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 35789999998777 999999999999997664 3789999999886
No 355
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=92.88 E-value=0.075 Score=43.55 Aligned_cols=48 Identities=6% Similarity=0.011 Sum_probs=37.3
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCC-CeeEEEeccCCChh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGI-PLGMVYVGKSNPKD 267 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~-~~Eiv~Vs~d~~~e 267 (425)
+..++.+.|+|.++ |++|+.+.+.+.++++.... .+.++.|.-|...+
T Consensus 30 l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~ 79 (121)
T 2j23_A 30 TGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQ 79 (121)
T ss_dssp HSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHH
T ss_pred HcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHH
Confidence 35788889999888 99999999999998654322 38888888876543
No 356
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=92.82 E-value=0.095 Score=39.37 Aligned_cols=41 Identities=7% Similarity=-0.078 Sum_probs=32.4
Q ss_pred EEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCCh
Q 014387 226 ICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPK 266 (425)
Q Consensus 226 I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~ 266 (425)
..++|++. |++|+++.+.+.+++++.+..+.++.|.-|.+.
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~ 46 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENP 46 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSC
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCH
Confidence 44556555 999999999999998776667888888877543
No 357
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=92.82 E-value=0.14 Score=41.27 Aligned_cols=44 Identities=2% Similarity=-0.050 Sum_probs=35.9
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCC-----CeeEEEeccCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGI-----PLGMVYVGKSN 264 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~-----~~Eiv~Vs~d~ 264 (425)
..++.+.|+|.+. |++|+.+.+.+.++++.... .+.++.|..+.
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~ 72 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA 72 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc
Confidence 4789999999888 99999999999999766443 67777777664
No 358
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=92.77 E-value=0.21 Score=43.73 Aligned_cols=55 Identities=7% Similarity=-0.057 Sum_probs=42.8
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCC-------ChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSN-------PKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~-------~~e~f~~~~~ 274 (425)
...||.+.|+|.+. |++|+...+.+.++.++ .+..++++.|+.|. +.+..+++.+
T Consensus 44 ~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~ 107 (183)
T 2obi_A 44 KYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAA 107 (183)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred HcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHH
Confidence 35799999999877 99999999999998654 34469999999763 4556666553
No 359
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=92.76 E-value=0.13 Score=42.21 Aligned_cols=43 Identities=5% Similarity=-0.031 Sum_probs=34.9
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC--CCeeEEEeccCC
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAG--IPLGMVYVGKSN 264 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~--~~~Eiv~Vs~d~ 264 (425)
.++.+.|+|.+. |++|+.+.+.+.++++... ..+.++.|..+.
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~ 69 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA 69 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc
Confidence 589999999988 9999999999999976643 467777776653
No 360
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=92.73 E-value=0.27 Score=41.87 Aligned_cols=56 Identities=11% Similarity=0.078 Sum_probs=42.9
Q ss_pred ccCCeEEEEEeCCC-cch-HHHHHHHHHHHHHHcC----CCeeEEEeccCC---ChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDW-IRKFTTATNAVAKTAG----IPLGMVYVGKSN---PKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w-~r~FT~~l~~~~k~~~----~~~Eiv~Vs~d~---~~e~f~~~~~~ 275 (425)
...||.+.|||.+. |++ |+...+.+.++.++.. ..++++.|+-|. +.+..+++.+.
T Consensus 32 ~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~ 96 (172)
T 2k6v_A 32 QFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKA 96 (172)
T ss_dssp GSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHH
T ss_pred HhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 35799999999777 998 9999999999865543 379999999874 23555555543
No 361
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=92.72 E-value=0.18 Score=42.92 Aligned_cols=22 Identities=18% Similarity=0.218 Sum_probs=15.4
Q ss_pred HHHHHhCCCCCCCeEEEECCCCcEE
Q 014387 147 QFIKEEWQFGKKPILVVLDPHGKVV 171 (425)
Q Consensus 147 ~~L~~~f~v~~iPtlVvLD~~GkVv 171 (425)
..+++.++..++|+++ + +|+.+
T Consensus 84 ~~L~~~~g~~tVP~vf-i--~g~~i 105 (129)
T 3ctg_A 84 DALEEISGQKTVPNVY-I--NGKHI 105 (129)
T ss_dssp HHHHHHHSCCSSCEEE-E--TTEEE
T ss_pred HHHHHHhCCCCCCEEE-E--CCEEE
Confidence 4566777888999965 4 46655
No 362
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=91.89 E-value=0.021 Score=48.76 Aligned_cols=54 Identities=11% Similarity=0.119 Sum_probs=42.8
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHH-HHHH-c-CCCeeEEEeccCCChhHHhhhhh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNA-VAKT-A-GIPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~-~~k~-~-~~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
..||.+.|+|.+. |++|+...+.+.+ +.+. . +..++++.|+.|.+.+..+++.+
T Consensus 31 ~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 88 (159)
T 2ls5_A 31 LRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAK 88 (159)
Confidence 5789999999888 9999999999998 6433 2 56899999998876666655543
No 363
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=92.63 E-value=0.24 Score=43.40 Aligned_cols=55 Identities=5% Similarity=0.019 Sum_probs=42.1
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC-------ChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN-------PKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~-------~~e~f~~~~~ 274 (425)
...||.+.|+|.+. |++|+...+.+.++.++.+..++++.|+.|. +.+..+++++
T Consensus 30 ~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~ 92 (188)
T 2cvb_A 30 QFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAE 92 (188)
T ss_dssp GCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHH
T ss_pred HhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHH
Confidence 35789999999877 9999999999999976544339999999863 4455555443
No 364
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=92.59 E-value=0.16 Score=43.54 Aligned_cols=55 Identities=15% Similarity=0.056 Sum_probs=42.6
Q ss_pred ccCCeE-EEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRY-ICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~-I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||. +.|+|. +. |++|+...+.+.++.++ .+..+++|.|+.|. .+..+++.+.
T Consensus 25 ~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~-~~~~~~~~~~ 83 (161)
T 3drn_A 25 DYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDD-INSHKRFKEK 83 (161)
T ss_dssp GTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCC-HHHHHHHHHH
T ss_pred HhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCC-HHHHHHHHHH
Confidence 357887 888886 66 99999999999998654 34569999999984 5667766654
No 365
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=92.51 E-value=0.24 Score=39.33 Aligned_cols=41 Identities=5% Similarity=-0.102 Sum_probs=33.6
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
.|+.+.++|.++ |++|+.+.+.+.++++... .+.++.|.-+
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~ 64 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCN 64 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecC
Confidence 588899999888 9999999999999976643 4677777665
No 366
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=92.50 E-value=0.19 Score=41.79 Aligned_cols=46 Identities=9% Similarity=0.005 Sum_probs=37.8
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.|+|.+. |++|+.+.+.+.++++.. ..+.++.|.-|...+
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~d~~~~ 81 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDADNNSE 81 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC-TTSEEEEEETTTCHH
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC-CCCEEEEEECCCCHH
Confidence 5788899999888 999999999999997765 358888888876543
No 367
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=92.48 E-value=0.21 Score=41.54 Aligned_cols=46 Identities=9% Similarity=0.049 Sum_probs=37.7
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..||.+.|+|.++ |++|+.+.+.+.++++.. ..+.++.|..|...+
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~v~~~~~~~ 90 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENY-PSLMFLVIDVDELSD 90 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCcccHH
Confidence 4688899999888 999999999999997664 368888888876543
No 368
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=92.43 E-value=0.23 Score=39.03 Aligned_cols=45 Identities=4% Similarity=-0.048 Sum_probs=35.6
Q ss_pred CeEEEEEeCCC-cchHHHHHHHHHHHHHHcC---CCeeEEEeccCCChh
Q 014387 223 GRYICLYGGED-MDWIRKFTTATNAVAKTAG---IPLGMVYVGKSNPKD 267 (425)
Q Consensus 223 gk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~---~~~Eiv~Vs~d~~~e 267 (425)
++.+.++|.+. |++|+.+.+.+.++++... ..+.++.|..+...+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 69 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN 69 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh
Confidence 77888888777 9999999999999975532 468888888776544
No 369
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=92.36 E-value=0.31 Score=39.57 Aligned_cols=43 Identities=2% Similarity=-0.043 Sum_probs=34.2
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
.+|.+.++|.|+ |+||+.+.|.+.++++.. ..+.++.|.-|..
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~d~~ 62 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSM-SDVVFLKVDVDEC 62 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHC-TTEEEEEEETTTC
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhcc-CCeEEEEEecccC
Confidence 478999999999 999999999999997663 3466666666543
No 370
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=92.32 E-value=0.18 Score=43.17 Aligned_cols=54 Identities=7% Similarity=0.016 Sum_probs=41.3
Q ss_pred cCCeEEEEEeCCC-cc-hHHHHHHHHHHHHH---HcCCCeeEEEeccCC---ChhHHhhhhh
Q 014387 221 AEGRYICLYGGED-MD-WIRKFTTATNAVAK---TAGIPLGMVYVGKSN---PKDRVRRNND 274 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~-w~r~FT~~l~~~~k---~~~~~~Eiv~Vs~d~---~~e~f~~~~~ 274 (425)
..||.+.|+|.+. |+ +|+...+.+.++.+ +.+..+++|.|+.|. +.+..+++.+
T Consensus 31 ~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~ 92 (174)
T 1xzo_A 31 LKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAA 92 (174)
T ss_dssp GTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHT
T ss_pred cCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHH
Confidence 5799999988777 99 99999999998843 334469999999983 4555666553
No 371
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=92.27 E-value=0.16 Score=44.06 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=35.7
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKS 263 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d 263 (425)
...||.+.|+|.+. |++|+ ..+.+.++.++ .+..++++.|+.|
T Consensus 29 ~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d 73 (171)
T 3cmi_A 29 QLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCN 73 (171)
T ss_dssp GGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECc
Confidence 35799999999888 99999 99999998654 3446999999875
No 372
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=92.24 E-value=0.27 Score=41.03 Aligned_cols=53 Identities=11% Similarity=-0.031 Sum_probs=40.0
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCC-ChhHHhhhh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSN-PKDRVRRNN 273 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~-~~e~f~~~~ 273 (425)
..||.+.|+|.+. |++|+...+.+.++.+.. +..+.++.|+.+. +.+..++++
T Consensus 26 ~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~ 81 (153)
T 2l5o_A 26 LQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYV 81 (153)
T ss_dssp HTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHH
T ss_pred hCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHH
Confidence 4788888888766 999999999999986553 4569999998653 344455544
No 373
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=92.23 E-value=0.22 Score=45.39 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=42.8
Q ss_pred ccCCeE-EEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccC-------CChhHHhhhhhh
Q 014387 220 MAEGRY-ICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKS-------NPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~-I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d-------~~~e~f~~~~~~ 275 (425)
...||. +.|+|.+. |++|+...+.|.++.++ .+..+++|.|+.| .+.+..+++.+.
T Consensus 55 ~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~ 120 (218)
T 3u5r_E 55 EFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKA 120 (218)
T ss_dssp GGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHH
T ss_pred HhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHH
Confidence 457884 88888777 99999999999999765 3456999999997 455556555543
No 374
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=92.06 E-value=0.59 Score=37.64 Aligned_cols=15 Identities=0% Similarity=-0.319 Sum_probs=12.2
Q ss_pred EEEecCCChHhHHHH
Q 014387 68 LLISDLDISQEEVII 82 (425)
Q Consensus 68 L~FsAsWC~pCr~~~ 82 (425)
..|+.+|||.|+.--
T Consensus 7 ~vYs~~~Cp~C~~aK 21 (92)
T 2lqo_A 7 TIYTTSWCGYCLRLK 21 (92)
T ss_dssp EEEECTTCSSHHHHH
T ss_pred EEEcCCCCHhHHHHH
Confidence 348999999999854
No 375
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.00 E-value=0.18 Score=42.07 Aligned_cols=46 Identities=9% Similarity=-0.095 Sum_probs=37.3
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC-CCeeEEEeccCCChh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAG-IPLGMVYVGKSNPKD 267 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~-~~~Eiv~Vs~d~~~e 267 (425)
+++.+.++|.+. |++|+.+.+.+.+++++.. ..+.++.|.-+...+
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~ 72 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTD 72 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHH
Confidence 456888999888 9999999999999976644 478888888776543
No 376
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=91.96 E-value=0.31 Score=41.39 Aligned_cols=45 Identities=9% Similarity=-0.043 Sum_probs=37.3
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSN 264 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~ 264 (425)
...||.+.|+|.+. |++|+.-.+.+.++.+. .+..++++.|+.|.
T Consensus 28 ~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 74 (169)
T 2v1m_A 28 KYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQ 74 (169)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred HcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 35899999999877 99999999999998654 34469999999863
No 377
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=91.95 E-value=0.28 Score=41.07 Aligned_cols=50 Identities=8% Similarity=0.012 Sum_probs=39.5
Q ss_pred eEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEecc--CCChhHHhhhhhh
Q 014387 224 RYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGK--SNPKDRVRRNNDT 275 (425)
Q Consensus 224 k~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~--d~~~e~f~~~~~~ 275 (425)
|.+.|+|.+. |++|+...+.+.++.+.. .++++.|+. +.+.+..+++++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~ 83 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKT 83 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTT
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHH
Confidence 7788887666 999999999999997665 889999998 4566666665533
No 378
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=91.89 E-value=0.2 Score=40.20 Aligned_cols=45 Identities=4% Similarity=0.014 Sum_probs=34.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
+.+++.+.++|.++ |++|+.+.+.+.++++.. ..+.++.|.-+..
T Consensus 16 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~-~~v~~~~vd~~~~ 61 (110)
T 2l6c_A 16 FEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARA-PQVAISSVDSEAR 61 (110)
T ss_dssp HTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTC-TTSCEEEEEGGGC
T ss_pred HHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHC-CCcEEEEEcCcCC
Confidence 45678888888888 999999999999986553 3677777766644
No 379
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=91.84 E-value=0.37 Score=40.20 Aligned_cols=45 Identities=11% Similarity=-0.093 Sum_probs=36.1
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
.++ +.|+|.++ |++|+.+.+.+.++++.....+.++.|..+...+
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~ 95 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPG 95 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHH
Confidence 345 77777777 9999999999999987766678999998876543
No 380
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=91.74 E-value=0.24 Score=45.19 Aligned_cols=47 Identities=6% Similarity=-0.084 Sum_probs=40.0
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..+|.+.|+|.+. |++|+.+.+.+.++++..+..+.++.|..|...+
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~ 75 (222)
T 3dxb_A 28 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG 75 (222)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT
T ss_pred hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH
Confidence 4688999999888 9999999999999987766678888888886543
No 381
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.72 E-value=0.28 Score=40.00 Aligned_cols=47 Identities=9% Similarity=0.031 Sum_probs=35.1
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC-CCeeEEEeccCCChh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAG-IPLGMVYVGKSNPKD 267 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~-~~~Eiv~Vs~d~~~e 267 (425)
...++ +.|+|.+. |++|+.+.+.+.++++... ..+.++.|.-+...+
T Consensus 20 ~~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~ 68 (126)
T 1x5e_A 20 LLEGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG 68 (126)
T ss_dssp HTSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH
T ss_pred HhCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH
Confidence 34555 67777777 9999999999999976533 478888887775543
No 382
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=91.67 E-value=1.1 Score=39.47 Aligned_cols=44 Identities=16% Similarity=-0.074 Sum_probs=33.1
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN 264 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~ 264 (425)
..++.+.+.|.+- |++|+.|.+.+.++.+..+..++++++.-+-
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~~ 67 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIAF 67 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCS
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEeccc
Confidence 3567666666555 9999999999999977655577777777653
No 383
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=91.46 E-value=0.29 Score=40.74 Aligned_cols=43 Identities=16% Similarity=0.093 Sum_probs=34.3
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHH---HHHHHHcCCCeeEEEeccCCC
Q 014387 222 EGRYICLYGGED-MDWIRKFTTAT---NAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l---~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
.||.+.|+|.++ |++|+.+.+.+ .++++... .+.++.|.-+..
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~ 76 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTAN 76 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTC
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCC
Confidence 488999999888 99999999888 77765544 488888877654
No 384
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=91.44 E-value=0.22 Score=40.11 Aligned_cols=16 Identities=0% Similarity=-0.205 Sum_probs=13.3
Q ss_pred EEEEecCCChHhHHHH
Q 014387 67 LLLISDLDISQEEVII 82 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~ 82 (425)
+..|+++|||+|+...
T Consensus 24 v~ly~~~~Cp~C~~ak 39 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTK 39 (103)
T ss_dssp EEEEECSSCHHHHHHH
T ss_pred EEEEcCCCCchHHHHH
Confidence 4448999999999876
No 385
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=91.42 E-value=0.35 Score=39.18 Aligned_cols=41 Identities=5% Similarity=-0.096 Sum_probs=33.2
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
.||.+.++|.++ |++|+.+.+.+.++++... .+.++.|..+
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~ 77 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCN 77 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecC
Confidence 688888888888 9999999999999976643 4667777665
No 386
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=91.28 E-value=0.4 Score=46.54 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=31.2
Q ss_pred cCCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEecc
Q 014387 61 LRRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPIV 109 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsIv 109 (425)
=.||.++..|+...||.|+.+. |.+.++.. .+.++.+|+-
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~~---------~Vr~i~~Pil 186 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKELTKLRDHLKEN---------TVRMVVVGWL 186 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHHHTHHHHHHHC---------EEEEEECCCS
T ss_pred CCCCeEEEEEECcCChhHHHHHHHHHHHhhCC---------cEEEEEeecc
Confidence 3578999999999999999998 77666532 3667777763
No 387
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=91.22 E-value=0.12 Score=42.19 Aligned_cols=46 Identities=13% Similarity=0.009 Sum_probs=37.4
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.|||.+. |++|+.+.+.+.++++... .+.++.|.-|+..+
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~ 80 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKE 80 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGG
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHH
Confidence 4688999999888 9999999999999976644 68888888776543
No 388
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=91.21 E-value=0.43 Score=40.35 Aligned_cols=55 Identities=4% Similarity=-0.228 Sum_probs=41.7
Q ss_pred ccCCe-EEEEEeC-CC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGR-YICLYGG-ED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk-~I~lY~g-~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...|| .+.|+|- +. |++|+...+.+.++.+.. +..++++.|+.|. .+..+++.+.
T Consensus 32 ~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~-~~~~~~~~~~ 90 (160)
T 1xvw_A 32 GYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGP-PPTHKIWATQ 90 (160)
T ss_dssp GGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCC-HHHHHHHHHH
T ss_pred HhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCC-HHHHHHHHHh
Confidence 35777 8888883 66 999999999999986553 4579999999984 4566665544
No 389
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=91.19 E-value=0.41 Score=36.45 Aligned_cols=33 Identities=6% Similarity=-0.005 Sum_probs=21.7
Q ss_pred EEEEecCCChHhHHHHHHHHHHHHHhhhccCCCceEEEEEec
Q 014387 67 LLLISDLDISQEEVIILEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
+..|+++|||+|+... .+-++. +-+|+++.|.+
T Consensus 6 v~ly~~~~Cp~C~~~~--~~L~~~-------~i~~~~~~vd~ 38 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAK--QWFEEN-------NIAFDETIIDD 38 (89)
T ss_dssp EEEEECTTCHHHHHHH--HHHHHT-------TCCCEEEECCS
T ss_pred EEEEEcCCChhHHHHH--HHHHHc-------CCCceEEEeec
Confidence 5668999999999865 222222 23578877753
No 390
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=91.15 E-value=0.26 Score=43.81 Aligned_cols=56 Identities=7% Similarity=-0.085 Sum_probs=43.3
Q ss_pred ccCCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|||. +. |++|+...+.+.++.+. .+..++++.|+.|. .+..+++.+..
T Consensus 42 ~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~-~~~~~~~~~~~ 100 (195)
T 2bmx_A 42 EHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDS-EFAHFQWRAQH 100 (195)
T ss_dssp SSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSC-HHHHHHHHHHC
T ss_pred HhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCC-HHHHHHHHHHh
Confidence 357899999997 77 99999999999998654 34579999999985 45555555443
No 391
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=91.06 E-value=0.14 Score=45.90 Aligned_cols=43 Identities=5% Similarity=-0.079 Sum_probs=29.0
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEec
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
.++++++.|++.|||+|+.+. |. +..++++ +...++.++++++
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~-~~~~~~~---~~~~~v~~~~~~~ 57 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMG-VDQAIRH---VLPQGSRMVKYHV 57 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSC-HHHHHHT---TCCTTCCEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHHhHhcc-chHHHHH---hCCCCCEEEEEec
Confidence 457889999999999999987 41 2233332 1123577888776
No 392
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=91.04 E-value=0.21 Score=44.49 Aligned_cols=56 Identities=11% Similarity=-0.083 Sum_probs=44.3
Q ss_pred CCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhhhc
Q 014387 222 EGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTIAS 278 (425)
Q Consensus 222 egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i~~ 278 (425)
.||.+.|||. +. |++|+...+.+.++.+. .+..++++.|+.|. .+..+++.+.+..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~-~~~~~~~~~~~~~ 90 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDS-EQVHFAWKNTPVE 90 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSC-HHHHHHHHTSCGG
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCC-HHHHHHHHHhhhh
Confidence 7899999998 77 99999999999998544 24579999999985 5566666665443
No 393
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=90.89 E-value=0.47 Score=41.75 Aligned_cols=54 Identities=7% Similarity=-0.072 Sum_probs=41.4
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCC-------ChhHHhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSN-------PKDRVRRNN 273 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~-------~~e~f~~~~ 273 (425)
...||.+.|+|.+. |++|+.-.+.+.++.++ .+..++++.|+.|. +.+..+++.
T Consensus 46 ~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~ 108 (185)
T 2gs3_A 46 KYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA 108 (185)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH
T ss_pred HcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHH
Confidence 35789999988777 99999999999998654 34569999999763 345555554
No 394
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=90.79 E-value=0.45 Score=40.45 Aligned_cols=55 Identities=11% Similarity=0.017 Sum_probs=42.2
Q ss_pred ccCCeEEEEEeCC-C-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGE-D-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~-d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|||.+ . |++|+.-.+.|.++.++ .+..+++|.|+.| +.+..+++.+.
T Consensus 32 ~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d-~~~~~~~~~~~ 89 (163)
T 3gkn_A 32 AHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD-SVKSHDNFCAK 89 (163)
T ss_dssp GGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHH
T ss_pred HhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHH
Confidence 3578888888865 4 99999999999998544 3456999999998 56666666653
No 395
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=90.78 E-value=0.39 Score=40.95 Aligned_cols=45 Identities=7% Similarity=-0.012 Sum_probs=36.8
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
.++.+.++|.+. |++|+.+.+.+.++++.. ..+.++.|.-+...+
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~~~~ 76 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVPE 76 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCCCHH
Confidence 388899999888 999999999999997664 468888887776543
No 396
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=90.17 E-value=0.045 Score=45.02 Aligned_cols=45 Identities=16% Similarity=0.202 Sum_probs=36.4
Q ss_pred cccCCeEEEEEeCCC-cchHHHHHHHH---HHHHHHcCCCeeEEEeccC
Q 014387 219 WMAEGRYICLYGGED-MDWIRKFTTAT---NAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 219 ~~~egk~I~lY~g~d-~~w~r~FT~~l---~~~~k~~~~~~Eiv~Vs~d 263 (425)
...+||.+.|||.+. |++|+.+.+.+ .++++..+..+.++.|.-+
T Consensus 15 ~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 63 (130)
T 2lst_A 15 AQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVD 63 (130)
Confidence 356889999999999 99999999998 7776655566777777665
No 397
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=90.61 E-value=0.41 Score=41.95 Aligned_cols=57 Identities=9% Similarity=-0.014 Sum_probs=42.3
Q ss_pred ccCCeEEEEEeCCC-cc-hHHHHHHHHHHH---HHHcCCCeeEEEeccCC---ChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGED-MD-WIRKFTTATNAV---AKTAGIPLGMVYVGKSN---PKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~-w~r~FT~~l~~~---~k~~~~~~Eiv~Vs~d~---~~e~f~~~~~~i 276 (425)
-..||.+.|||+.- |+ ||..-++.+.++ .++.+.++.+|+||-|. +.+..++|.+..
T Consensus 29 d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~ 93 (170)
T 4hde_A 29 DLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKF 93 (170)
T ss_dssp HHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTT
T ss_pred HhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHc
Confidence 47899999999766 85 998888888777 34467889999999773 335566665443
No 398
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=89.92 E-value=0.05 Score=42.27 Aligned_cols=45 Identities=11% Similarity=-0.048 Sum_probs=35.5
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
..++.+.++|.+. |++|+.+.+.+.++++..+..+.++.|..|..
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 62 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDEN 62 (106)
Confidence 4678888888887 99999999999988766555677777776644
No 399
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=90.46 E-value=0.24 Score=46.54 Aligned_cols=49 Identities=6% Similarity=-0.065 Sum_probs=40.9
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVR 270 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~ 270 (425)
.||.+.++|.+. |++|+.+.|.+.++++..+..+.++.|.-|...+-.+
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~ 74 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAA 74 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHH
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHH
Confidence 489999999999 9999999999999987766678899998887654333
No 400
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=90.34 E-value=0.51 Score=42.29 Aligned_cols=56 Identities=13% Similarity=0.066 Sum_probs=42.6
Q ss_pred ccCCeEEEEEeCCC-cch-HHHHHHHHHHHHHH----cCCCeeEEEeccCC---ChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDW-IRKFTTATNAVAKT----AGIPLGMVYVGKSN---PKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w-~r~FT~~l~~~~k~----~~~~~Eiv~Vs~d~---~~e~f~~~~~~ 275 (425)
...||.+.|+|.+. |++ |+.-.+.|.++.+. .+..++++.|+-|. +.+..+++.+.
T Consensus 38 ~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~ 102 (200)
T 2b7k_A 38 NLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSD 102 (200)
T ss_dssp GGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTT
T ss_pred HcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHH
Confidence 35789999999777 998 99999999987432 25689999999984 45556665543
No 401
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=90.29 E-value=0.43 Score=43.89 Aligned_cols=44 Identities=9% Similarity=-0.069 Sum_probs=36.9
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC---CCeeEEEeccCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAG---IPLGMVYVGKSN 264 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~---~~~Eiv~Vs~d~ 264 (425)
..++.+.++|.+. |++|+.|.+.+.++++... ..+.++.|..+.
T Consensus 28 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~ 75 (244)
T 3q6o_A 28 GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE 75 (244)
T ss_dssp SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS
T ss_pred hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc
Confidence 3569999999999 9999999999999977644 389999998743
No 402
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=90.15 E-value=0.7 Score=37.74 Aligned_cols=45 Identities=0% Similarity=-0.150 Sum_probs=36.3
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHH-----cCCCeeEEEeccCCCh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKT-----AGIPLGMVYVGKSNPK 266 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-----~~~~~Eiv~Vs~d~~~ 266 (425)
.++.+.++|.+. |++|+.+.+.+.++++. .+..+.++.|..+...
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~ 82 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP 82 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH
Confidence 589999999888 99999999999998643 2456888888777543
No 403
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=90.08 E-value=0.39 Score=41.08 Aligned_cols=51 Identities=12% Similarity=-0.057 Sum_probs=39.3
Q ss_pred cCCeEEEEEeCCC--cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhh
Q 014387 221 AEGRYICLYGGED--MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNN 273 (425)
Q Consensus 221 ~egk~I~lY~g~d--~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~ 273 (425)
..||.+.|+|.+. |++|+...+.+.++.++. ..++++.|+.|.+ +..+++.
T Consensus 42 ~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~-~~~~~~~ 94 (167)
T 2jsy_A 42 MKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLP-FAQARWC 94 (167)
T ss_dssp HTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSG-GGTSCCG
T ss_pred hCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCH-HHHHHHH
Confidence 4688888887543 999999999999997665 7899999999843 3444444
No 404
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=89.98 E-value=0.21 Score=43.23 Aligned_cols=43 Identities=9% Similarity=-0.013 Sum_probs=32.8
Q ss_pred ccCCeEEEEEeCCC-cchHHHHH------HHHHHHHHHcCCCeeEEEeccCCC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFT------TATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT------~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
..+||.|.|+|.+. |+|||.+. +.+.+.++. .+.++.|.-|..
T Consensus 44 ~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~---~~~~v~v~~d~~ 93 (172)
T 3f9u_A 44 RQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN---DYVLITLYVDNK 93 (172)
T ss_dssp HHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEETTCC
T ss_pred HHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---CEEEEEEecCcc
Confidence 36899999999999 99999983 444444333 788888887754
No 405
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=89.97 E-value=0.12 Score=44.45 Aligned_cols=46 Identities=26% Similarity=0.333 Sum_probs=35.4
Q ss_pred ccCCeEEEEEe-CCC-cchHHHHHHHH---HHHHHHcCCCeeEEEeccCCC
Q 014387 220 MAEGRYICLYG-GED-MDWIRKFTTAT---NAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 220 ~~egk~I~lY~-g~d-~~w~r~FT~~l---~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
..+||.+.||| |++ |++|+.+.+.+ .++.+..+..+.++.|..+..
T Consensus 44 ~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~ 94 (154)
T 2ju5_A 44 KQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQK 94 (154)
T ss_dssp HHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSS
T ss_pred HhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccc
Confidence 35789999999 477 99999999999 666554456778887776643
No 406
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=89.96 E-value=0.22 Score=39.45 Aligned_cols=45 Identities=9% Similarity=0.073 Sum_probs=34.8
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC---CCeeEEEeccCC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAG---IPLGMVYVGKSN 264 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~---~~~Eiv~Vs~d~ 264 (425)
+..++.+.|+|.+. |++|+.+.+.+.++++... ..+.++.|..+.
T Consensus 21 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~ 69 (120)
T 1mek_A 21 LAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE 69 (120)
T ss_dssp HHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT
T ss_pred HccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC
Confidence 34688999999888 9999999999999865532 456677776654
No 407
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=89.84 E-value=0.65 Score=42.49 Aligned_cols=56 Identities=9% Similarity=-0.047 Sum_probs=42.6
Q ss_pred ccCCeEEEEEeCC-C-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGE-D-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~-d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|+|.+ . |++|+.-.+.|.++.++ .+..+++|.|+.|.. +..+++.+.+
T Consensus 66 ~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~~~ 124 (222)
T 3ztl_A 66 DYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQ-YSHLAWDNLD 124 (222)
T ss_dssp GGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHHHSC
T ss_pred HhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHHh
Confidence 3579999999985 5 99999999999998654 355799999999853 3444544444
No 408
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=89.78 E-value=0.55 Score=38.49 Aligned_cols=42 Identities=12% Similarity=-0.040 Sum_probs=34.1
Q ss_pred CCeEEEEEeCC--------CcchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 222 EGRYICLYGGE--------DMDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 222 egk~I~lY~g~--------d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
.|+.+.++|.+ -|++|+.+.|.+.++++.....+.++.|.-+
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~ 72 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVG 72 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECC
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECC
Confidence 37888888855 4999999999999997776567888888774
No 409
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=89.70 E-value=0.49 Score=42.58 Aligned_cols=48 Identities=10% Similarity=-0.017 Sum_probs=39.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
+..++.+.|+|.+. |++|+.+.+.+.++++..+..+.++.|..+...+
T Consensus 111 ~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~ 159 (210)
T 3apq_A 111 VNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRM 159 (210)
T ss_dssp HHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH
T ss_pred HccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHH
Confidence 35788999999888 9999999999999987766678888888776543
No 410
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=89.69 E-value=0.79 Score=37.62 Aligned_cols=22 Identities=18% Similarity=0.074 Sum_probs=15.6
Q ss_pred HHHHhCCCCCCCeEEEECCCCcEEc
Q 014387 148 FIKEEWQFGKKPILVVLDPHGKVVC 172 (425)
Q Consensus 148 ~L~~~f~v~~iPtlVvLD~~GkVv~ 172 (425)
.+++..+..++|++++ +|+.+-
T Consensus 61 ~l~~~~g~~tvP~vfi---~g~~ig 82 (114)
T 3h8q_A 61 VLSEITNQKTVPNIFV---NKVHVG 82 (114)
T ss_dssp HHHHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHHHhCCCccCEEEE---CCEEEe
Confidence 4555567788999877 777663
No 411
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=89.65 E-value=0.27 Score=41.10 Aligned_cols=42 Identities=10% Similarity=-0.060 Sum_probs=31.3
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN 264 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~ 264 (425)
..||.+.|+|.+. |++|+.+.+.+.++++.. .+.++.|..|.
T Consensus 38 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~ 80 (133)
T 3cxg_A 38 TQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDI 80 (133)
T ss_dssp -CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccc
Confidence 3578999999888 999999999998875443 45555565553
No 412
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=89.48 E-value=0.46 Score=39.85 Aligned_cols=42 Identities=5% Similarity=-0.064 Sum_probs=33.4
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN 264 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~ 264 (425)
.|+.+.|||.+. |++|+.+.+.+.+++++. ..+.++.|..+.
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~-~~v~~~~vd~~~ 71 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKF-PETKFVKAIVNS 71 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-SSEEEEEECCSS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCcEEEEEEhhc
Confidence 468999999999 999999999999997664 346666665553
No 413
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=89.45 E-value=0.76 Score=40.78 Aligned_cols=55 Identities=15% Similarity=-0.027 Sum_probs=42.7
Q ss_pred cCCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 221 AEGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 221 ~egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
..||.+.|+|. ++ |++|+...+.|.+++++ .+..++++.|+.|.. +..+++++..
T Consensus 32 ~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~-~~~~~~~~~~ 89 (197)
T 1qmv_A 32 YKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQ-FTHLAWINTP 89 (197)
T ss_dssp GTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHHTSC
T ss_pred HCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHHH
Confidence 57899999998 77 99999999999988654 345799999999853 4455555444
No 414
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=89.27 E-value=0.49 Score=43.17 Aligned_cols=54 Identities=13% Similarity=-0.052 Sum_probs=42.6
Q ss_pred CCeEEEEEeC-CC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhhhh
Q 014387 222 EGRYICLYGG-ED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 222 egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
.||.+.|||. ++ |++|+.-.+.+.+++++. +..+++|.|+.|. .+..+++.+..
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~-~~~~~~~~~~~ 107 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDS-KYTHLAWKKTP 107 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSC-HHHHHHHHSSC
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHH
Confidence 7899999997 77 999999999999886543 4689999999984 45566655544
No 415
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=89.23 E-value=0.45 Score=41.67 Aligned_cols=54 Identities=4% Similarity=0.089 Sum_probs=39.9
Q ss_pred cCCe-EEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCC-------ChhHHhhhhh
Q 014387 221 AEGR-YICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSN-------PKDRVRRNND 274 (425)
Q Consensus 221 ~egk-~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~-------~~e~f~~~~~ 274 (425)
..|| .+.|+|.+. |++|+...+.+.++.++. +..++++.|+.|. +.+..+++++
T Consensus 43 ~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~ 106 (196)
T 2ywi_A 43 VKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAE 106 (196)
T ss_dssp HCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHH
T ss_pred hCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHH
Confidence 4677 488888777 999999999999986543 3469999999873 4445555443
No 416
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=89.10 E-value=0.57 Score=42.59 Aligned_cols=55 Identities=7% Similarity=-0.018 Sum_probs=42.4
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCC-------ChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSN-------PKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~-------~~e~f~~~~~ 274 (425)
...||.+.|+|.+. |++|++-.+.|.++.++ .+..++++-|+.|. +.+..+++++
T Consensus 44 ~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~ 107 (208)
T 2f8a_A 44 SLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLK 107 (208)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHH
T ss_pred HcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHH
Confidence 35899999999888 99999999999998654 34469999999761 3355666554
No 417
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=89.09 E-value=0.68 Score=41.37 Aligned_cols=56 Identities=9% Similarity=-0.047 Sum_probs=43.0
Q ss_pred ccCCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|||. ++ |++|+...+.+.++.++ .+..++++.|+.|. .+..+++.+..
T Consensus 33 ~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~-~~~~~~~~~~~ 91 (202)
T 1uul_A 33 SYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDS-EYSHLAWTSIE 91 (202)
T ss_dssp GGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC-HHHHHHHHHSC
T ss_pred HhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHH
Confidence 347899999997 77 99999999999988654 35679999999984 44555555444
No 418
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=88.86 E-value=0.4 Score=42.40 Aligned_cols=54 Identities=13% Similarity=-0.045 Sum_probs=42.5
Q ss_pred CCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 222 EGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 222 egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
.||.+.|+|. ++ |++|+...+.+.++.++ .+..+++|.|+.|. .+..+++.+..
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~-~~~~~~~~~~~ 86 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDS-KFTHLAWKKTP 86 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSC-HHHHHHHHTSC
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCC-HHHHHHHHHhH
Confidence 7899999997 77 99999999999988544 24679999999984 45566665554
No 419
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=88.78 E-value=0.43 Score=41.87 Aligned_cols=54 Identities=6% Similarity=-0.112 Sum_probs=41.2
Q ss_pred ccCCeEEEEEeC-CC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccCCChhHHhhhhh
Q 014387 220 MAEGRYICLYGG-ED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
...||.+.|||. +. |++|+...+.+.++.+.. +..++++.|+.|. .+..+++.+
T Consensus 28 ~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~-~~~~~~~~~ 84 (187)
T 1we0_A 28 DLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDT-HFVHKAWHE 84 (187)
T ss_dssp TTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSC-HHHHHHHHH
T ss_pred HHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCC-HHHHHHHHH
Confidence 357899999997 77 999999999999985442 3479999999986 344455443
No 420
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=88.60 E-value=0.083 Score=46.25 Aligned_cols=46 Identities=9% Similarity=0.065 Sum_probs=34.6
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
...||.+.|+|.++ |+||+.+.+.+.++++..+..+.++.|.-|.+
T Consensus 43 ~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~ 89 (164)
T 1sen_A 43 AASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDE 89 (164)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGG
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCC
Confidence 45789999999999 99999999999887443333456666766544
No 421
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.55 E-value=2.6 Score=37.86 Aligned_cols=100 Identities=11% Similarity=0.137 Sum_probs=56.1
Q ss_pred CCcccCCCCCeEecc----ccCCCEEEEEEecCCChHhHHHH---HH--HHHHHHHhhhccCCCceEEEEEeccCCCCCC
Q 014387 45 LPLVDGATKTRVNLE----VLRRKMVLLLISDLDISQEEVII---LE--QLYSEARQHQTRHESQYEVVWLPIVDPNMPW 115 (425)
Q Consensus 45 ~pl~dg~~g~~V~ls----~LkGK~VlL~FsAsWC~pCr~~~---L~--~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w 115 (425)
++.+.|+=..-+..+ .=.+|.+++|+.+.||+.|..|- |. ++-+-+++ +|=+....+ +
T Consensus 33 p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-------nfV~w~~dv-~----- 99 (178)
T 2ec4_A 33 PVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-------NFITWAWDL-T----- 99 (178)
T ss_dssp CCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-------TEEEEEEEC-C-----
T ss_pred CCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-------CEEEEEEeC-C-----
Confidence 345555322233333 34689999999999999999886 22 24444432 344434443 1
Q ss_pred chHHHHHHHHHHhCCCceeeccCcccChHHHHHHHHhCCCCCCCeEEEECCCC
Q 014387 116 TDNKQKQFQSLQSAMPWYTVYHPSLIDRAVIQFIKEEWQFGKKPILVVLDPHG 168 (425)
Q Consensus 116 ~D~~~~~F~~~~~~mPW~aV~~p~l~D~~~~~~L~~~f~v~~iPtlVvLD~~G 168 (425)
.++.++.|-.+... .+ -. ......+.|++.+.|++++|+++|
T Consensus 100 ~~e~~~~~~~~~~~------~~----g~-~~a~~~~~~~~~~~P~l~ii~~~~ 141 (178)
T 2ec4_A 100 KDSNRARFLTMCNR------HF----GS-VVAQTIRTQKTDQFPLFLIIMGKR 141 (178)
T ss_dssp SHHHHHHHHHHHHH------HT----CH-HHHHHHHHSCSTTCSEEEEECCCS
T ss_pred Cchhhhhhhhhhhh------hh----HH-HHHHHHhhcCCCCCCeEEEEEcCC
Confidence 23444445332211 00 00 011223458999999999999875
No 422
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=88.54 E-value=0.69 Score=40.28 Aligned_cols=55 Identities=13% Similarity=0.009 Sum_probs=41.1
Q ss_pred ccCCeEEEEEeCCC-cc-hHHHHHHHHHHHHHHc---CCCeeEEEeccCC--ChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MD-WIRKFTTATNAVAKTA---GIPLGMVYVGKSN--PKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~-w~r~FT~~l~~~~k~~---~~~~Eiv~Vs~d~--~~e~f~~~~~ 274 (425)
...||.+.|||.+. |+ +|+.-.+.+.++.++. +..+++|.||-|. +.+..+++.+
T Consensus 25 ~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~ 86 (170)
T 3me7_A 25 NLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQK 86 (170)
T ss_dssp GGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHH
T ss_pred HhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHH
Confidence 35699999999766 97 6999999999886543 4789999999883 3344555443
No 423
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=88.41 E-value=1 Score=36.56 Aligned_cols=20 Identities=15% Similarity=0.310 Sum_probs=14.2
Q ss_pred CCEEEEEEec----CCChHhHHHH
Q 014387 63 RKMVLLLISD----LDISQEEVII 82 (425)
Q Consensus 63 GK~VlL~FsA----sWC~pCr~~~ 82 (425)
...|.||..+ +|||+|+.-.
T Consensus 14 ~~~vvvy~~g~~~~~~Cp~C~~ak 37 (109)
T 1wik_A 14 KASVMLFMKGNKQEAKCGFSKQIL 37 (109)
T ss_dssp TSSEEEEESSTTTCCCSSTHHHHH
T ss_pred cCCEEEEEecCCCCCCCchHHHHH
Confidence 3346666665 9999999765
No 424
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=88.11 E-value=0.32 Score=43.51 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=29.5
Q ss_pred CCEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEec
Q 014387 63 RKMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 63 GK~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
+|++++.|++-|||+|+.+. |.++-+++ ++.+..+|+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~---------~v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA---------GTDIGKMHI 60 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH---------TSCCEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh---------CCeEEEEec
Confidence 68999999999999999988 77766655 245667776
No 425
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=87.93 E-value=1 Score=40.85 Aligned_cols=56 Identities=13% Similarity=-0.068 Sum_probs=42.8
Q ss_pred ccCCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|||. +. |++|+.-.+.|.++.++ .+..+++|.||.|.. +..+++.+..
T Consensus 45 d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~~~ 103 (211)
T 2pn8_A 45 DYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQ-FTHLAWINTP 103 (211)
T ss_dssp GGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHHTSC
T ss_pred HhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHHh
Confidence 357899999997 77 99999988988888544 346899999999754 4556665554
No 426
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=87.87 E-value=0.97 Score=38.97 Aligned_cols=54 Identities=11% Similarity=-0.049 Sum_probs=41.0
Q ss_pred ccCCeEEEEEe--CCCcchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYG--GEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~--g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|+| +..|++|+.-.+.+.++.++. ..++++.|+.|. .+..+++.+.
T Consensus 44 ~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~-~~~~~~~~~~ 99 (171)
T 2yzh_A 44 GAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDL-PFAQKRFCES 99 (171)
T ss_dssp SCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSC-HHHHHHHHHH
T ss_pred HhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCC-HHHHHHHHHH
Confidence 35688888887 445999999999998886555 789999999985 4455555543
No 427
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=87.82 E-value=0.21 Score=41.35 Aligned_cols=45 Identities=7% Similarity=-0.085 Sum_probs=33.0
Q ss_pred cCCeEEEEEeCCC-cc--------------hHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 221 AEGRYICLYGGED-MD--------------WIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~--------------w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
..||.+.++|.++ |+ +|+.+.+.+.++++.....+.++.|.-|..
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~ 78 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQN 78 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSC
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCC
Confidence 5789999999888 99 999999999888665555688888877754
No 428
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=87.76 E-value=0.49 Score=35.82 Aligned_cols=38 Identities=8% Similarity=0.057 Sum_probs=31.7
Q ss_pred EEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 226 ICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 226 I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
+-+|.+..|++|+...+.+.++++..+.+++++-|..|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~ 41 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTD 41 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTC
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCC
Confidence 56777777999999999999987776788888888765
No 429
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=87.44 E-value=0.82 Score=40.95 Aligned_cols=43 Identities=19% Similarity=0.123 Sum_probs=37.3
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN 264 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~ 264 (425)
.++.+.+-|+|+ |+|||...|.|.+++++......++.|.-|.
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe 83 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE 83 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC
Confidence 578899999999 9999999999999988776677788887764
No 430
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=87.13 E-value=0.75 Score=45.83 Aligned_cols=56 Identities=7% Similarity=-0.062 Sum_probs=43.2
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc-CCCeeEEEeccC-----CChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKTA-GIPLGMVYVGKS-----NPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~-~~~~Eiv~Vs~d-----~~~e~f~~~~~~ 275 (425)
...||.+.|+|.+. |++|+...+.+.++++.. +..++++.|+.| .+.+..+++++.
T Consensus 79 dl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~ 141 (352)
T 2hyx_A 79 SLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAAN 141 (352)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHH
T ss_pred HhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHH
Confidence 35799999999888 999999999999996553 447999999875 345566665543
No 431
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=87.13 E-value=1.3 Score=38.70 Aligned_cols=54 Identities=11% Similarity=-0.017 Sum_probs=40.6
Q ss_pred ccCCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhh
Q 014387 220 MAEGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
...||.+.|||. +. |++|+.=.+.|.++.++ .+..++++.|+.|. .+..+++.+
T Consensus 48 d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~-~~~~~~~~~ 104 (179)
T 3ixr_A 48 DYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDS-VKSHDSFCA 104 (179)
T ss_dssp GGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCC-HHHHHHHHH
T ss_pred HHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHH
Confidence 367898888885 66 99999988999888544 46679999999985 344555544
No 432
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=86.76 E-value=0.85 Score=41.70 Aligned_cols=55 Identities=16% Similarity=0.001 Sum_probs=42.2
Q ss_pred cCCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 221 AEGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 221 ~egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
..||.+.|||. ++ |++|+.-.+.+.++.++ .+..+++|.|+.|. .+..+++.+..
T Consensus 54 ~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~-~~~~~~~~~~~ 111 (220)
T 1zye_A 54 FKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDS-HFSHLAWINTP 111 (220)
T ss_dssp GTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSC-HHHHHHHHTSC
T ss_pred hCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC-HHHHHHHHHHH
Confidence 56899999997 77 99999999999988554 34579999999984 44555555444
No 433
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=86.37 E-value=0.79 Score=42.23 Aligned_cols=54 Identities=9% Similarity=-0.065 Sum_probs=41.8
Q ss_pred CCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 222 EGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 222 egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
.||.+.|||. +. |++|+.-.+.|.++.++ .+..+++|.||.|.. +..+++.+..
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~~~ 111 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSV-YSHLAWKNMP 111 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHHSC
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHh
Confidence 7899999997 77 99999999999888544 235799999999753 4455655554
No 434
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=85.78 E-value=1.2 Score=40.01 Aligned_cols=53 Identities=11% Similarity=-0.108 Sum_probs=41.0
Q ss_pred ccCCeEEEEEeC-C-CcchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhh
Q 014387 220 MAEGRYICLYGG-E-DMDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g-~-d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
...||.+.|+|- + .|++|+.=.+.+.++.++. ..++++.||.|. .+..+++.+
T Consensus 75 d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~-~~~~~~~~~ 129 (200)
T 3zrd_A 75 SFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDL-PFAQSRFCG 129 (200)
T ss_dssp GGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSC-HHHHTTCTT
T ss_pred HhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCC-HHHHHHHHH
Confidence 357898888885 4 4999999999999997666 679999999984 445555543
No 435
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=85.77 E-value=1.7 Score=37.20 Aligned_cols=54 Identities=11% Similarity=-0.165 Sum_probs=40.8
Q ss_pred ccCCeEEEEEeCC-C-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGGE-D-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g~-d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|||-+ . |++|+.-.+.+.++.++. ..++++.||.|. .+..+++.+.
T Consensus 39 ~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~-~~~~~~~~~~ 94 (163)
T 1psq_A 39 DFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDL-PFAQKRWCGA 94 (163)
T ss_dssp GGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSC-HHHHHHHHHH
T ss_pred HhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCC-HHHHHHHHHh
Confidence 3578999999853 4 999999888888886555 789999999985 3445555443
No 436
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=85.67 E-value=0.44 Score=39.77 Aligned_cols=38 Identities=8% Similarity=-0.157 Sum_probs=30.5
Q ss_pred EEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC
Q 014387 225 YICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN 264 (425)
Q Consensus 225 ~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~ 264 (425)
.+.|||.+. |++|+.+.+.+.++++..+ +.++.|.-+.
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~ 71 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGS 71 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECT
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCC
Confidence 788888888 9999999999999976655 6666666543
No 437
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=85.45 E-value=0.61 Score=37.94 Aligned_cols=44 Identities=7% Similarity=-0.008 Sum_probs=33.1
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHH---HHHHHHcCCCeeEEEeccCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTAT---NAVAKTAGIPLGMVYVGKSN 264 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l---~~~~k~~~~~~Eiv~Vs~d~ 264 (425)
.+||.+.|+|.+. |++|+.+.+.+ .++++..+..+.++-|..+.
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 72 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEK 72 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSS
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCC
Confidence 4789999999888 99999999988 55644444456666666553
No 438
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=85.43 E-value=1.5 Score=32.12 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=28.2
Q ss_pred EEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEec
Q 014387 226 ICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVG 261 (425)
Q Consensus 226 I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs 261 (425)
|-+|. ..|++|+.+.+.+.+++++.+.+++++.|.
T Consensus 4 v~f~a-~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~ 38 (77)
T 1ilo_A 4 IQIYG-TGCANCQMLEKNAREAVKELGIDAEFEKIK 38 (77)
T ss_dssp EEEEC-SSSSTTHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEc-CCChhHHHHHHHHHHHHHHcCCceEEEEec
Confidence 34443 359999999999999988877788888886
No 439
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=84.65 E-value=4.4 Score=35.49 Aligned_cols=97 Identities=7% Similarity=-0.117 Sum_probs=50.1
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhhhhccccccccCCCcchhhhhHhhhh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDTIASENLSHIWQDLTSIWYFWVRLES 300 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~i~~e~ls~~~~~~~~~~~FW~~les 300 (425)
.++..-+.|.+- ||+|+.|.+.+.++.+..+..+.++++.-.-...+.......+..+. ...||--.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~----------~g~~~~~~~~ 93 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLES----------MGVEHDVHNA 93 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHH----------HTCCHHHHHH
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHH----------cCCHHHHHHH
Confidence 456544444444 99999999999998766555666665554322222111111111111 1235666666
Q ss_pred hhhhhhhcCCCCCCchHHHHHHHHhccc
Q 014387 301 MWYSKVQLGRNAETDHVMQEIMRMLTYD 328 (425)
Q Consensus 301 ~~~sk~~~~~~~~~d~i~~ei~~ll~~~ 328 (425)
++..-...|+...+...+.++..-+.+|
T Consensus 94 lf~~~~~~~~~~~~~~~l~~~a~~~Gld 121 (192)
T 3h93_A 94 VFEAIHKEHKKLATPEEMADFLAGKGVD 121 (192)
T ss_dssp HHHHHHTSCCCCCSHHHHHHHHHTTTCC
T ss_pred HHHHHHHhCcCCCCHHHHHHHHHHcCCC
Confidence 6655444444444444454444433333
No 440
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=84.61 E-value=1.6 Score=37.63 Aligned_cols=55 Identities=16% Similarity=0.041 Sum_probs=35.3
Q ss_pred ccccCCCccccccccCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCC-CeeEEEeccC
Q 014387 207 LLVDGLDPVILNWMAEGRYICLYGGED-MDWIRKFTTATNAVAKTAGI-PLGMVYVGKS 263 (425)
Q Consensus 207 ll~d~~d~~i~~~~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~-~~Eiv~Vs~d 263 (425)
|+.++.+|.+.+ ..++...+.|.+- ||+|+.|.+.+.++.++.+. .++++.+.-.
T Consensus 8 l~~~~~~~~~G~--~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~~p~~ 64 (175)
T 3gyk_A 8 LFNDPNAPVLGN--PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYREWPIL 64 (175)
T ss_dssp HHCCTTSCEEEC--TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEECCCS
T ss_pred HhcCCCCCCcCC--CCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEeCCCC
Confidence 344455666552 4566554555554 99999999999999776543 4555555443
No 441
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=84.35 E-value=1.5 Score=42.20 Aligned_cols=44 Identities=9% Similarity=-0.106 Sum_probs=37.9
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSN 264 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~ 264 (425)
..++.+.++|.+. |++|+.+.+.+.++++..+..+.++.|.-|.
T Consensus 33 ~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~ 77 (298)
T 3ed3_A 33 NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDL 77 (298)
T ss_dssp SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTS
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccC
Confidence 3578899999888 9999999999999988777678899998874
No 442
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=83.75 E-value=1.3 Score=38.51 Aligned_cols=51 Identities=14% Similarity=-0.033 Sum_probs=39.2
Q ss_pred cCCeEEEEEeCC-C-cchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhh
Q 014387 221 AEGRYICLYGGE-D-MDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 221 ~egk~I~lY~g~-d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
..||.+.|||.+ . |++|+.-.+.+.++.++ ..+++|.|+.|.+ +..+++.+
T Consensus 42 ~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~-~~~~~~~~ 94 (175)
T 1xvq_A 42 FRGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLP-FAQKRFCG 94 (175)
T ss_dssp GTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCH-HHHTTCC-
T ss_pred cCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCH-HHHHHHHH
Confidence 478888888854 4 99999999999999766 7799999999854 34455544
No 443
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=83.61 E-value=2.1 Score=36.68 Aligned_cols=53 Identities=11% Similarity=-0.125 Sum_probs=40.3
Q ss_pred ccCCeEEEEEeC-C-CcchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhh
Q 014387 220 MAEGRYICLYGG-E-DMDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g-~-d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
...||.+.|||- + .|++|+.=.+.+.++.++. ..++++.||.|.+ +..+++.+
T Consensus 40 ~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~-~~~~~~~~ 94 (165)
T 1q98_A 40 DFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLP-FAQARFCG 94 (165)
T ss_dssp GGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCH-HHHTTCTT
T ss_pred HhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCH-HHHHHHHH
Confidence 357898888884 4 4999998888888887666 7899999998753 44555443
No 444
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=83.50 E-value=6.1 Score=34.35 Aligned_cols=41 Identities=12% Similarity=0.099 Sum_probs=28.9
Q ss_pred CCeE-EEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEecc
Q 014387 222 EGRY-ICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGK 262 (425)
Q Consensus 222 egk~-I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~ 262 (425)
.++. |-.|+.-.||||+.|.+.+.+++++.+..++++++.-
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 4554 4455454499999999999998766555666666654
No 445
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=83.38 E-value=1.5 Score=38.15 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=39.6
Q ss_pred ccCC-eEEEEEeCCC-c--chHHHHHHHHHHHHHHcCCCeeEEEeccCCChh
Q 014387 220 MAEG-RYICLYGGED-M--DWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKD 267 (425)
Q Consensus 220 ~~eg-k~I~lY~g~d-~--~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e 267 (425)
+..+ +.+.++|.++ | +|||...|.+.+++++.+..+.++-|.-|...+
T Consensus 29 v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~ 80 (137)
T 2qsi_A 29 IAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERG 80 (137)
T ss_dssp HHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHH
T ss_pred HhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHH
Confidence 3344 4899999998 8 999999999999988877889999998875443
No 446
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=83.17 E-value=1.7 Score=37.27 Aligned_cols=53 Identities=11% Similarity=-0.127 Sum_probs=39.2
Q ss_pred ccCCeEEEEEeC--CCcchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhh
Q 014387 220 MAEGRYICLYGG--EDMDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 220 ~~egk~I~lY~g--~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
...||.+.|+|- ..|++|+.=.+.+.++.++ ..++++.||.|. .+..+++.+.
T Consensus 43 ~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~-~~~~~~~~~~ 97 (166)
T 3p7x_A 43 DYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADL-PFAQKRWCAS 97 (166)
T ss_dssp GGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSC-HHHHHHHHHH
T ss_pred HhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCC-HHHHHHHHHH
Confidence 357887777774 4499999888888888544 789999999874 4455555543
No 447
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=83.10 E-value=1.9 Score=36.45 Aligned_cols=51 Identities=0% Similarity=-0.031 Sum_probs=36.5
Q ss_pred CCe--EEEEEe--CCCcchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhh
Q 014387 222 EGR--YICLYG--GEDMDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 222 egk--~I~lY~--g~d~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
.|| .+.|+| +..|++|+.-.+.+.++.++ .+.. +++.|+.|. .+..+++.+
T Consensus 32 ~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~-~~~~~~~~~ 87 (159)
T 2a4v_A 32 TENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADS-VTSQKKFQS 87 (159)
T ss_dssp HHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCC-HHHHHHHHH
T ss_pred hCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCC-HHHHHHHHH
Confidence 454 777776 55699999999999988544 2334 999999884 455566554
No 448
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=82.95 E-value=2.2 Score=38.65 Aligned_cols=52 Identities=15% Similarity=0.073 Sum_probs=29.7
Q ss_pred cCCCccccccccCCe-EEEEEeCCCcchHHHHHHHH---HHHHHHcC--CCeeEEEec
Q 014387 210 DGLDPVILNWMAEGR-YICLYGGEDMDWIRKFTTAT---NAVAKTAG--IPLGMVYVG 261 (425)
Q Consensus 210 d~~d~~i~~~~~egk-~I~lY~g~d~~w~r~FT~~l---~~~~k~~~--~~~Eiv~Vs 261 (425)
.|.|+.....-..++ .|--||+-.|++|+.|.|.+ .++++... ..|.-+-|.
T Consensus 100 ~g~~y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~ 157 (197)
T 1un2_A 100 DGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVN 157 (197)
T ss_dssp BTTTEEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECS
T ss_pred CCCCceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccC
Confidence 355554322112244 44445555599999999998 88765533 444444443
No 449
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=82.53 E-value=2.3 Score=37.47 Aligned_cols=54 Identities=7% Similarity=-0.033 Sum_probs=39.4
Q ss_pred cCCeEEEEEeC--CCcchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhh
Q 014387 221 AEGRYICLYGG--EDMDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 221 ~egk~I~lY~g--~d~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
..||.+.|+|- ..|++|+.-.+.|.++.++ .+..++++.||.|. .+..+++.+.
T Consensus 28 ~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~-~~~~~~~~~~ 84 (186)
T 1n8j_A 28 TEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDT-HFTHKAWHSS 84 (186)
T ss_dssp HTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSC-HHHHHHHHHH
T ss_pred HCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCC-HHHHHHHHHH
Confidence 46898888874 4599999999999888543 34579999999885 3444555443
No 450
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=81.40 E-value=5.1 Score=34.98 Aligned_cols=41 Identities=10% Similarity=-0.177 Sum_probs=29.4
Q ss_pred CCeEEEEEeCC-CcchHHHHHHHHHHHHHHcCCCeeEEEecc
Q 014387 222 EGRYICLYGGE-DMDWIRKFTTATNAVAKTAGIPLGMVYVGK 262 (425)
Q Consensus 222 egk~I~lY~g~-d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~ 262 (425)
.++...++|.+ .||||+.|.+.+.++.+..+..+.+.++.-
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 45554444544 499999999999998776555677766654
No 451
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=80.62 E-value=0.73 Score=41.39 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=30.6
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHH---HHHHHHHcCCCeeEEEeccC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTA---TNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~---l~~~~k~~~~~~Eiv~Vs~d 263 (425)
..+||.|+|.|+++ |.|||.+.+. ..++++..+..|-.+-|..|
T Consensus 36 ~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~d 83 (173)
T 3ira_A 36 RKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDRE 83 (173)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETT
T ss_pred HHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCc
Confidence 36799999999999 9999998873 23444433335655555444
No 452
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=80.57 E-value=1 Score=40.47 Aligned_cols=41 Identities=5% Similarity=-0.039 Sum_probs=29.7
Q ss_pred cCCCEEEEEEecCCChHhHHHH--H---HHHHHHHHhhhccCCCceEEEEEec
Q 014387 61 LRRKMVLLLISDLDISQEEVII--L---EQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 61 LkGK~VlL~FsAsWC~pCr~~~--L---~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
..+|++++.|+.-+||+|+.+- | .++-+++. +++.++++++
T Consensus 19 ~~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~-------~~v~~~~~~~ 64 (191)
T 3l9s_A 19 VAGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLP-------EGTKMTKYHV 64 (191)
T ss_dssp CCSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSC-------TTCCEEEEEC
T ss_pred CCCCCeEEEEECCCChhHHHhChhccchHHHHHhCC-------CCcEEEEEec
Confidence 3468899999999999999987 4 35555542 2466777664
No 453
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=79.46 E-value=7.9 Score=29.55 Aligned_cols=14 Identities=0% Similarity=-0.261 Sum_probs=11.5
Q ss_pred EEecC----CChHhHHHH
Q 014387 69 LISDL----DISQEEVII 82 (425)
Q Consensus 69 ~FsAs----WC~pCr~~~ 82 (425)
.|+.+ |||.|+.-.
T Consensus 4 iY~~~~~~~~Cp~C~~ak 21 (87)
T 1aba_A 4 VYGYDSNIHKCGPCDNAK 21 (87)
T ss_dssp EEECCTTTSCCHHHHHHH
T ss_pred EEEeCCCCCcCccHHHHH
Confidence 46889 999998765
No 454
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=78.83 E-value=2.2 Score=44.68 Aligned_cols=44 Identities=7% Similarity=-0.028 Sum_probs=37.0
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC---CCeeEEEeccCC
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTAG---IPLGMVYVGKSN 264 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~---~~~Eiv~Vs~d~ 264 (425)
..++.+.|+|.++ |++||.+.|.+.++++... ..+.++.|.-+.
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~ 75 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE 75 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc
Confidence 4569999999999 9999999999999976543 378999998764
No 455
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=78.37 E-value=3.9 Score=32.45 Aligned_cols=40 Identities=8% Similarity=0.156 Sum_probs=29.2
Q ss_pred CCeEEEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 222 EGRYICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 222 egk~I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
.++.|.+|++..|++|+.+.+.+.++ +..++++-|..+..
T Consensus 18 ~~~~vv~f~a~~C~~C~~~~~~l~~~----~~~~~~v~v~~~~~ 57 (116)
T 2e7p_A 18 SSAPVVVFSKTYCGYCNRVKQLLTQV----GASYKVVELDELSD 57 (116)
T ss_dssp TSSSEEEEECTTCHHHHHHHHHHHHH----TCCCEEEEGGGSTT
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHc----CCCeEEEEccCCCC
Confidence 44556666555599999998887766 56678888877755
No 456
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=76.73 E-value=4 Score=36.84 Aligned_cols=49 Identities=18% Similarity=0.099 Sum_probs=34.7
Q ss_pred CeEEEEEeCC-------C-cchHHHHHHHHHHHHHHcC-----CCeeEEEeccCCChhHHhh
Q 014387 223 GRYICLYGGE-------D-MDWIRKFTTATNAVAKTAG-----IPLGMVYVGKSNPKDRVRR 271 (425)
Q Consensus 223 gk~I~lY~g~-------d-~~w~r~FT~~l~~~~k~~~-----~~~Eiv~Vs~d~~~e~f~~ 271 (425)
+..+.++|.| . |.|||.|.|.+.+++++-. ..+-++-|.-|...+-+++
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~ 98 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKD 98 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHH
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHH
Confidence 4567777766 4 9999999999999976533 5666666666655444444
No 457
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=76.60 E-value=18 Score=31.95 Aligned_cols=42 Identities=10% Similarity=-0.053 Sum_probs=28.9
Q ss_pred CCeE-EEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 222 EGRY-ICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 222 egk~-I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
.++. |-.|+.-.|++|+.|.+.+.++++..+..+.+..+.-+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 3555 44455555999999999999997665545655555544
No 458
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=76.15 E-value=11 Score=29.25 Aligned_cols=13 Identities=15% Similarity=0.087 Sum_probs=10.1
Q ss_pred EEecCCChHhHHH
Q 014387 69 LISDLDISQEEVI 81 (425)
Q Consensus 69 ~FsAsWC~pCr~~ 81 (425)
.|+.++||.|+..
T Consensus 6 ly~~~~C~~c~~~ 18 (93)
T 1t1v_A 6 VYSTSVTGSREIK 18 (93)
T ss_dssp EEECSSCSCHHHH
T ss_pred EEEcCCCCCchhh
Confidence 4688999999643
No 459
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=75.92 E-value=4.1 Score=33.72 Aligned_cols=42 Identities=7% Similarity=0.058 Sum_probs=34.1
Q ss_pred CCeEEEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 222 EGRYICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 222 egk~I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
.++.+.++|.+.|.+|+.+.+.+.+++++.+..+-++.|..|
T Consensus 22 ~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d 63 (133)
T 2djk_A 22 AGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAK 63 (133)
T ss_dssp TTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTT
T ss_pred CCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchH
Confidence 345566777777999999999999998887777777887766
No 460
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=75.71 E-value=2.9 Score=31.49 Aligned_cols=37 Identities=5% Similarity=0.025 Sum_probs=28.1
Q ss_pred EEEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 225 YICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 225 ~I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
.|-||+...|++|+.-. .++++.++++|.+.|..+.+
T Consensus 5 ~v~ly~~~~Cp~C~~~~----~~L~~~~i~~~~~~vd~~~~ 41 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAK----QWFEENNIAFDETIIDDYAQ 41 (89)
T ss_dssp CEEEEECTTCHHHHHHH----HHHHHTTCCCEEEECCSHHH
T ss_pred EEEEEEcCCChhHHHHH----HHHHHcCCCceEEEeecCCC
Confidence 37789888899997644 44566689999999876644
No 461
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=75.18 E-value=1.9 Score=37.80 Aligned_cols=44 Identities=7% Similarity=-0.090 Sum_probs=30.3
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHH---HHHHHHcCCCeeEEEeccC
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTAT---NAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l---~~~~k~~~~~~Eiv~Vs~d 263 (425)
-.++|.|.||++++ |.||+.|.... .+|++..+.+|=.+.|..+
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~ 86 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHD 86 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESS
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecC
Confidence 36799999999998 99999996543 2333222336766666554
No 462
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=75.14 E-value=4.3 Score=35.30 Aligned_cols=53 Identities=11% Similarity=0.026 Sum_probs=36.9
Q ss_pred CCeEEEEEe--CCCcchHHH-HHHHHHHHHHH-cCCCe-eEEEeccCCChhHHhhhhhh
Q 014387 222 EGRYICLYG--GEDMDWIRK-FTTATNAVAKT-AGIPL-GMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 222 egk~I~lY~--g~d~~w~r~-FT~~l~~~~k~-~~~~~-Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
.||.+.|+| ++.|++|+. =.+.+.+.+++ .+..+ +++-||.|. .+..+++.+.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~-~~~~~~~~~~ 87 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVND-SFVMDAWGKA 87 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSC-HHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC-HHHHHHHHHh
Confidence 787777766 666999998 77777776433 24568 999999874 4455555443
No 463
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=75.11 E-value=24 Score=30.31 Aligned_cols=37 Identities=8% Similarity=-0.022 Sum_probs=25.0
Q ss_pred EEEEEeCCCcchHHHHHHHH-HHHHHHcCCCeeEEEec
Q 014387 225 YICLYGGEDMDWIRKFTTAT-NAVAKTAGIPLGMVYVG 261 (425)
Q Consensus 225 ~I~lY~g~d~~w~r~FT~~l-~~~~k~~~~~~Eiv~Vs 261 (425)
.+--|++=.||||+.|.+.+ .++.+..+..+.++++.
T Consensus 20 ~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~ 57 (195)
T 3c7m_A 20 TLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFH 57 (195)
T ss_dssp EEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEE
T ss_pred EEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEe
Confidence 44446664499999999999 88866554445544443
No 464
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=75.05 E-value=5.2 Score=37.11 Aligned_cols=56 Identities=13% Similarity=-0.072 Sum_probs=41.6
Q ss_pred ccCCeEEEEEeCC-C-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGGE-D-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g~-d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||++.|+|-+ + |++|+.=.+.+.+++++ .+..++++.||.|. .+..+++.+.+
T Consensus 74 d~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~-~~~~~~~~~~~ 132 (240)
T 3qpm_A 74 DYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDS-QFTHLAWIITP 132 (240)
T ss_dssp GGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSC-HHHHHHHHHSC
T ss_pred HhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCC-HHHHHHHHHHH
Confidence 3578988888865 5 99999988888888554 35679999999885 34445555444
No 465
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=74.80 E-value=2.1 Score=37.27 Aligned_cols=42 Identities=5% Similarity=-0.021 Sum_probs=30.9
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHH---HHHcCCCeeEEEec
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAV---AKTAGIPLGMVYVG 261 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~---~k~~~~~~Eiv~Vs 261 (425)
..+||.|.|+|+++ |+||+.+.+.+.+. .+..+..|-.|-|.
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD 86 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM 86 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec
Confidence 46799999999999 99999999988753 22223356555554
No 466
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=73.97 E-value=6.2 Score=33.84 Aligned_cols=41 Identities=5% Similarity=-0.008 Sum_probs=28.4
Q ss_pred CCeE-EEEEeCCCcchHHHHHHHHHHHHHHc--CCCeeEEEecc
Q 014387 222 EGRY-ICLYGGEDMDWIRKFTTATNAVAKTA--GIPLGMVYVGK 262 (425)
Q Consensus 222 egk~-I~lY~g~d~~w~r~FT~~l~~~~k~~--~~~~Eiv~Vs~ 262 (425)
.++. |-.|+.-.||+|+.|.+.+.++++.. +..+.++|..-
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 5564 55555555999999999998886553 45666666544
No 467
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=72.88 E-value=5.6 Score=36.44 Aligned_cols=54 Identities=9% Similarity=-0.003 Sum_probs=39.6
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCC-------ChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSN-------PKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~-------~~e~f~~~~~ 274 (425)
...||.+.|+|.|. |++|++ .+.|.++.++ .+..++++-|+.|. +.++.+++++
T Consensus 53 d~~GKvvll~FwAt~C~~c~e-~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~ 115 (215)
T 2i3y_A 53 QYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK 115 (215)
T ss_dssp GGTTSEEEEEEECSSSGGGGG-HHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred HhCCCEEEEEEeCCCCCChHh-HHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHHHH
Confidence 46899999999888 999995 5678888544 34569999998652 3345555554
No 468
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=72.87 E-value=2.9 Score=35.46 Aligned_cols=58 Identities=24% Similarity=0.330 Sum_probs=0.0
Q ss_pred EEEEecCCChHhHHHH--HHHHHH-HHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCCCceeeccCcccCh
Q 014387 67 LLLISDLDISQEEVII--LEQLYS-EARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAMPWYTVYHPSLIDR 143 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~--L~~iY~-~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~mPW~aV~~p~l~D~ 143 (425)
++.|+.+|||.|+.-- |.+.+. .. .|+++-|. .+.+.....+
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~~~~v---------~~~~idid--------~~~d~~~~~~------------------ 60 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEYQFIP---------NYYIIELD--------KHGHGEELQE------------------ 60 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHEEEES---------CCEEEEGG--------GSTTHHHHHH------------------
T ss_pred EEEEEcCCCccHHHHHHHHHHhcccCC---------CcEEEEec--------CCCCHHHHHH------------------
Q ss_pred HHHHHHHHhCCCCCCCeEEE
Q 014387 144 AVIQFIKEEWQFGKKPILVV 163 (425)
Q Consensus 144 ~~~~~L~~~f~v~~iPtlVv 163 (425)
.+++..+...+|.++|
T Consensus 61 ----~l~~~~G~~tVP~IfI 76 (127)
T 3l4n_A 61 ----YIKLVTGRGTVPNLLV 76 (127)
T ss_dssp ----HHHHHHSCCSSCEEEE
T ss_pred ----HHHHHcCCCCcceEEE
No 469
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=72.84 E-value=5.2 Score=33.00 Aligned_cols=40 Identities=15% Similarity=0.313 Sum_probs=32.7
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 224 RYICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 224 k~I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
..|-+|+...|++|+...+.|.+++.+.++.|+.|=|..|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~i~~~~vDId~d 69 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSWFELEVINIDGN 69 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSCCCCEEEETTTC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 4577887777999999999999998877888887777653
No 470
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=72.39 E-value=5 Score=34.28 Aligned_cols=54 Identities=9% Similarity=0.062 Sum_probs=37.9
Q ss_pred cCCeEEEEEeC--CCcchHH-HHHHHHHHHHHH-cCCCee-EEEeccCCChhHHhhhhhh
Q 014387 221 AEGRYICLYGG--EDMDWIR-KFTTATNAVAKT-AGIPLG-MVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 221 ~egk~I~lY~g--~d~~w~r-~FT~~l~~~~k~-~~~~~E-iv~Vs~d~~~e~f~~~~~~ 275 (425)
..||.+.|+|- +.|++|+ .=.+.+.++.++ .+..++ ++.||.|. .+..+++.+.
T Consensus 33 ~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~-~~~~~~~~~~ 91 (162)
T 1tp9_A 33 VAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVND-PFVMKAWAKS 91 (162)
T ss_dssp HTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSC-HHHHHHHHHT
T ss_pred hCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC-HHHHHHHHHh
Confidence 57888877774 4599999 677778777543 235788 99999884 4455555543
No 471
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=71.91 E-value=3.8 Score=35.64 Aligned_cols=40 Identities=3% Similarity=-0.081 Sum_probs=28.1
Q ss_pred CCCEEEEEEecCCChHhHHHH--H-HHHHHHHHhhhccCCCceEEEEEec
Q 014387 62 RRKMVLLLISDLDISQEEVII--L-EQLYSEARQHQTRHESQYEVVWLPI 108 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L-~~iY~~~k~~~~k~~~~fEIV~IsI 108 (425)
.++++++.|+...||.|..+. | .++-+++. .++.++++++
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~-------~~v~~~~~~l 58 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVK-------DIVAFTPFHL 58 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTT-------TTCEEEEEEC
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCC-------CceEEEEEec
Confidence 356677778889999999877 5 66655542 2467777764
No 472
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=70.70 E-value=4.6 Score=33.47 Aligned_cols=40 Identities=5% Similarity=-0.091 Sum_probs=30.2
Q ss_pred CeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 223 GRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 223 gk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
++.+.++|.+. |+||+...|.+.+++++.. .+..+-|.-|
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d 63 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVN 63 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhH
Confidence 45888999888 9999999999999987643 3444444443
No 473
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=69.85 E-value=25 Score=29.71 Aligned_cols=53 Identities=11% Similarity=0.027 Sum_probs=34.1
Q ss_pred cCCCccccccccCC-eEEEEEeCCCcchHHHHHHHHHHHHHHc--CCCeeEEEecc
Q 014387 210 DGLDPVILNWMAEG-RYICLYGGEDMDWIRKFTTATNAVAKTA--GIPLGMVYVGK 262 (425)
Q Consensus 210 d~~d~~i~~~~~eg-k~I~lY~g~d~~w~r~FT~~l~~~~k~~--~~~~Eiv~Vs~ 262 (425)
+|.|+.+...-..+ ..|--||+=.||.|++|.+.+.++.+.. +..+..+++.-
T Consensus 8 eG~~Y~vl~~p~~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~ 63 (184)
T 4dvc_A 8 EGEHYQVLKTPASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSF 63 (184)
T ss_dssp BTTTEEECSSCCCSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSS
T ss_pred CCCCcEECCCCCCCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCC
Confidence 46666543222233 4677787666999999999999987664 34455555543
No 474
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=69.60 E-value=6.2 Score=36.65 Aligned_cols=55 Identities=7% Similarity=0.038 Sum_probs=38.3
Q ss_pred CCe-EEEEEe-CCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhhh
Q 014387 222 EGR-YICLYG-GED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTIA 277 (425)
Q Consensus 222 egk-~I~lY~-g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i~ 277 (425)
.|| .+.|+| .++ |++|+.-.+.+.+++.+ .+..+++|.||.|. .++.+++.+.|.
T Consensus 27 ~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~-~~~~~~~~~~i~ 85 (233)
T 2v2g_A 27 LGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDN-VADHKEWSEDVK 85 (233)
T ss_dssp HCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred CCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHHH
Confidence 455 665665 455 99999888888877543 34679999999985 455566666554
No 475
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=68.76 E-value=5 Score=36.78 Aligned_cols=40 Identities=10% Similarity=0.003 Sum_probs=31.1
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEecc
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVGK 262 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~ 262 (425)
.|+.+.++|.++ |++|+.+.+.+.++++... .+.++.|..
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~ 159 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRA 159 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEH
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEEC
Confidence 468999999888 9999999999999976542 455555544
No 476
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=68.46 E-value=15 Score=33.25 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=25.9
Q ss_pred CEEEEEEecCCChHhHHHH--HHHHHHHHHhhhccCCCceEEEEEe
Q 014387 64 KMVLLLISDLDISQEEVII--LEQLYSEARQHQTRHESQYEVVWLP 107 (425)
Q Consensus 64 K~VlL~FsAsWC~pCr~~~--L~~iY~~~k~~~~k~~~~fEIV~Is 107 (425)
+.++|+|.+.||+.|.... +.++-+++++ ++-++||.
T Consensus 132 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~-------~i~F~~vd 170 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEENMHRYQKAAKLFQG-------KILFILVD 170 (227)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHTTT-------TCEEEEEE
T ss_pred ceEEEEEEcCCcchHHHHHHHHHHHHHHhhC-------CEEEEEeC
Confidence 5667778888999987765 6666666642 46677765
No 477
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=68.41 E-value=7.7 Score=38.10 Aligned_cols=47 Identities=6% Similarity=-0.034 Sum_probs=36.8
Q ss_pred cCCeEEEEEeCCC-cchHHHHHHHHHHHHHHc------CCCeeEEEeccCCChh
Q 014387 221 AEGRYICLYGGED-MDWIRKFTTATNAVAKTA------GIPLGMVYVGKSNPKD 267 (425)
Q Consensus 221 ~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~------~~~~Eiv~Vs~d~~~e 267 (425)
..++.+.++|.+. |++|+.+.+.+.++++.. +..+-++-|..+...+
T Consensus 20 ~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~ 73 (382)
T 2r2j_A 20 NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSD 73 (382)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHH
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHH
Confidence 4678999999998 999999999999987653 3457777777776543
No 478
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=68.24 E-value=10 Score=34.69 Aligned_cols=52 Identities=10% Similarity=-0.040 Sum_probs=35.6
Q ss_pred EEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhhh
Q 014387 225 YICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTIA 277 (425)
Q Consensus 225 ~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i~ 277 (425)
.|.+++.++ |++|+.=.+.+.+++++ .+..+++|.||-|.. ++-+++.+.|.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~-~~~~~~~~~i~ 87 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSV-EDHLAWSKDIN 87 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCH-HHHHHHHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHHH
Confidence 444444555 99999888888887544 356899999999853 44455555443
No 479
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=67.44 E-value=6.3 Score=31.44 Aligned_cols=35 Identities=9% Similarity=0.080 Sum_probs=28.5
Q ss_pred EEEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 225 YICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 225 ~I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
.|-||+...||+|+ +++++++..+++||.+-|..|
T Consensus 5 ~I~vYs~~~Cp~C~----~aK~~L~~~gi~y~~idi~~d 39 (92)
T 2lqo_A 5 ALTIYTTSWCGYCL----RLKTALTANRIAYDEVDIEHN 39 (92)
T ss_dssp CEEEEECTTCSSHH----HHHHHHHHTTCCCEEEETTTC
T ss_pred cEEEEcCCCCHhHH----HHHHHHHhcCCceEEEEcCCC
Confidence 47899998899995 455666778999999999776
No 480
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=66.18 E-value=11 Score=30.55 Aligned_cols=49 Identities=8% Similarity=0.173 Sum_probs=34.8
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 224 RYICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 224 k~I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
..|-+|....||+|+. ++.+++..+++++.+-|..+.+.+..++.+..+
T Consensus 17 ~~v~vy~~~~Cp~C~~----ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~ 65 (114)
T 3h8q_A 17 SRVVIFSKSYCPHSTR----VKELFSSLGVECNVLELDQVDDGARVQEVLSEI 65 (114)
T ss_dssp CSEEEEECTTCHHHHH----HHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCcHHH----HHHHHHHcCCCcEEEEecCCCChHHHHHHHHHH
Confidence 3467788877999964 445555668999999998876666666655443
No 481
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=65.61 E-value=7.2 Score=36.78 Aligned_cols=54 Identities=6% Similarity=0.004 Sum_probs=37.8
Q ss_pred CCeE-EEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 222 EGRY-ICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 222 egk~-I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
.||. |.++|.++ |++|+.-.+.+.+++++ .+..++++.||.|.. ++-++..+.|
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~-~~~~~w~~~~ 88 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSV-FSHIKWKEWI 88 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCH-HHHHHHHHHH
Confidence 7885 45566666 99999999988887544 345799999999853 3334444433
No 482
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=65.27 E-value=6.1 Score=33.75 Aligned_cols=29 Identities=10% Similarity=0.006 Sum_probs=22.8
Q ss_pred CCCEEEEEEecCCChHhHHHH--HHHHHHHH
Q 014387 62 RRKMVLLLISDLDISQEEVII--LEQLYSEA 90 (425)
Q Consensus 62 kGK~VlL~FsAsWC~pCr~~~--L~~iY~~~ 90 (425)
.++++++-|+.-.||.|+.+- |.++.+++
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~ 50 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQL 50 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhc
Confidence 467788888889999999987 66666555
No 483
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=65.19 E-value=8.9 Score=28.42 Aligned_cols=35 Identities=6% Similarity=0.190 Sum_probs=24.0
Q ss_pred EEEEeCCCcchHHHHHHHHHHHHHH-cCCCeeEEEe
Q 014387 226 ICLYGGEDMDWIRKFTTATNAVAKT-AGIPLGMVYV 260 (425)
Q Consensus 226 I~lY~g~d~~w~r~FT~~l~~~~k~-~~~~~Eiv~V 260 (425)
|-+|+...|++|+...+.|.+++.. .++.++.+=|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi 38 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDI 38 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEECH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEEec
Confidence 4566666699999999999988554 4444444433
No 484
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=64.10 E-value=6.1 Score=37.13 Aligned_cols=56 Identities=13% Similarity=-0.068 Sum_probs=40.7
Q ss_pred ccCCeEEEEEeC-CC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhh
Q 014387 220 MAEGRYICLYGG-ED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 220 ~~egk~I~lY~g-~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i 276 (425)
...||.+.|+|- ++ |++|+.=.+.|.+++++ .+..+++|.||.|.. +..+++.+.+
T Consensus 88 d~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~-~~~~~~~~~~ 146 (254)
T 3tjj_A 88 DYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQ-FTHLAWINTP 146 (254)
T ss_dssp GGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHHTSC
T ss_pred HHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCH-HHHHHHHHHH
Confidence 357898888885 66 99999888888887544 356799999999853 4444544443
No 485
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=64.05 E-value=7.6 Score=40.28 Aligned_cols=50 Identities=12% Similarity=-0.067 Sum_probs=38.6
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcC---C-----CeeEEEeccCCChhHHhh
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAG---I-----PLGMVYVGKSNPKDRVRR 271 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~---~-----~~Eiv~Vs~d~~~e~f~~ 271 (425)
.+|.+.|+|.+. |++|+.+.|.+.++++... . .+.++.|.-|...+-.++
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~ 99 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRK 99 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHH
Confidence 457899999999 9999999999999976543 2 588888888766544333
No 486
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=63.38 E-value=10 Score=34.28 Aligned_cols=54 Identities=11% Similarity=0.080 Sum_probs=39.1
Q ss_pred ccCCeEEEEEeCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCC-------ChhHHhhhhh
Q 014387 220 MAEGRYICLYGGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSN-------PKDRVRRNND 274 (425)
Q Consensus 220 ~~egk~I~lY~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~-------~~e~f~~~~~ 274 (425)
...||.+.|+|.+. |++|++ .+.|.++.++ .+..++++-|+.|. +.+..+++.+
T Consensus 35 ~~kGKvvll~F~At~C~~c~e-~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~ 97 (207)
T 2r37_A 35 QYAGKYVLFVNVASYGGLTGQ-YIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK 97 (207)
T ss_dssp GGTTSEEEEEEECSSSTTTTH-HHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHHH
T ss_pred HhCCCEEEEEEeCCCCCChHH-HHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHHHHHHHH
Confidence 46899999999888 999965 5678887543 34569999998652 2345555554
No 487
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=62.69 E-value=13 Score=32.73 Aligned_cols=55 Identities=11% Similarity=0.011 Sum_probs=36.7
Q ss_pred cCCeEEEEEe--CCCcchHH-HHHHHHHHHHHH-cCCCeeEEE-eccCCChhHHhhhhhhh
Q 014387 221 AEGRYICLYG--GEDMDWIR-KFTTATNAVAKT-AGIPLGMVY-VGKSNPKDRVRRNNDTI 276 (425)
Q Consensus 221 ~egk~I~lY~--g~d~~w~r-~FT~~l~~~~k~-~~~~~Eiv~-Vs~d~~~e~f~~~~~~i 276 (425)
..||.+-||| ++.|++|+ .=.+.+.+.+++ .+..+++|. ||.|. .+..+++.+..
T Consensus 41 ~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~-~~~~~~f~~~~ 100 (173)
T 3mng_A 41 FKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVND-AFVTGEWGRAH 100 (173)
T ss_dssp TTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSC-HHHHHHHHHHT
T ss_pred hCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCC-HHHHHHHHHHh
Confidence 4777665555 77799999 466777777544 456799996 99884 34445544433
No 488
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=62.25 E-value=3.7 Score=35.01 Aligned_cols=42 Identities=2% Similarity=-0.112 Sum_probs=25.3
Q ss_pred CCeEEEEEeCCC---cchHHHHHHHHHHHHHHcCCCee--EEEeccCC
Q 014387 222 EGRYICLYGGED---MDWIRKFTTATNAVAKTAGIPLG--MVYVGKSN 264 (425)
Q Consensus 222 egk~I~lY~g~d---~~w~r~FT~~l~~~~k~~~~~~E--iv~Vs~d~ 264 (425)
..+.+.++|.++ |++|+.+.|.+.+++++. ..+. ++.|.-|.
T Consensus 33 ~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~ 79 (142)
T 2es7_A 33 RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQ 79 (142)
T ss_dssp -CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHH
T ss_pred hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCC
Confidence 333344455443 899999999999998765 4566 77776653
No 489
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=61.56 E-value=11 Score=31.53 Aligned_cols=46 Identities=0% Similarity=-0.011 Sum_probs=32.1
Q ss_pred EEEEeCCCcchHHHHHHHHHHHHHHcC---CCeeEEEeccCCChhHHhhhhh
Q 014387 226 ICLYGGEDMDWIRKFTTATNAVAKTAG---IPLGMVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 226 I~lY~g~d~~w~r~FT~~l~~~~k~~~---~~~Eiv~Vs~d~~~e~f~~~~~ 274 (425)
|-+|+...|++|+.. |+.++...+ ++++.+-|..+.+....++.+.
T Consensus 39 Vvvy~~~~Cp~C~~a---~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~ 87 (129)
T 3ctg_A 39 VFVAAKTYCPYCKAT---LSTLFQELNVPKSKALVLELDEMSNGSEIQDALE 87 (129)
T ss_dssp EEEEECTTCHHHHHH---HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHH
T ss_pred EEEEECCCCCchHHH---HHHHHHhcCccCCCcEEEEccccCCHHHHHHHHH
Confidence 778888889999865 245555557 8999999988765344444443
No 490
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=61.24 E-value=10 Score=35.64 Aligned_cols=39 Identities=10% Similarity=-0.028 Sum_probs=30.6
Q ss_pred CCeEEEEEeCCC-cchHHHHHHHHHHHHHHcCCCeeEEEec
Q 014387 222 EGRYICLYGGED-MDWIRKFTTATNAVAKTAGIPLGMVYVG 261 (425)
Q Consensus 222 egk~I~lY~g~d-~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs 261 (425)
.++.+.|+|.+. |++|+.+.+.+.++++... .+-++-|.
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-~v~f~kVd 171 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP-MVKFCKIK 171 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-TSEEEEEE
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CCEEEEEe
Confidence 488999999999 9999999999999976643 34444443
No 491
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.47 E-value=19 Score=29.08 Aligned_cols=56 Identities=7% Similarity=-0.108 Sum_probs=0.0
Q ss_pred EEEEecCCChHhHHHH-HHHHHHHHHhhhccCCCceEEEEEeccCCCCCCchHHHHHHHHHHhCC--------Cceeec
Q 014387 67 LLLISDLDISQEEVII-LEQLYSEARQHQTRHESQYEVVWLPIVDPNMPWTDNKQKQFQSLQSAM--------PWYTVY 136 (425)
Q Consensus 67 lL~FsAsWC~pCr~~~-L~~iY~~~k~~~~k~~~~fEIV~IsIvd~s~~w~D~~~~~F~~~~~~m--------PW~aV~ 136 (425)
+..|+.++||.|+..- -.++-+-+++ .++++..+.| +.+.+..+++...+ .|..||
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~~------~gi~y~~vdI--------~~~~~~~~~l~~~~~~~~~~~~g~~tvP 74 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLEA------NKIEFEEVDI--------TMSEEQRQWMYKNVPPEKKPTQGNPLPP 74 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH------TTCCEEEEET--------TTCHHHHHHHHHSCCTTTCCSSSSCCSC
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHHH------cCCCEEEEEC--------CCCHHHHHHHHHHhcccccccCCCCCCC
No 492
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=59.29 E-value=13 Score=30.34 Aligned_cols=46 Identities=4% Similarity=-0.036 Sum_probs=30.3
Q ss_pred EEEEEeCCCcchHHHHHHHHHHHHHHcC---CCeeEEEeccCCChhHHhhhh
Q 014387 225 YICLYGGEDMDWIRKFTTATNAVAKTAG---IPLGMVYVGKSNPKDRVRRNN 273 (425)
Q Consensus 225 ~I~lY~g~d~~w~r~FT~~l~~~~k~~~---~~~Eiv~Vs~d~~~e~f~~~~ 273 (425)
.|-+|+...|++|+.. |..+++..+ ++++.+-|..+.+..+.++.+
T Consensus 26 ~Vvvf~~~~Cp~C~~a---lk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l 74 (118)
T 3c1r_A 26 EIFVASKTYCPYCHAA---LNTLFEKLKVPRSKVLVLQLNDMKEGADIQAAL 74 (118)
T ss_dssp SEEEEECSSCHHHHHH---HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHH
T ss_pred cEEEEEcCCCcCHHHH---HHHHHHHcCCCCCCeEEEECccCCChHHHHHHH
Confidence 3667888779999876 345555556 788888887765433344433
No 493
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=59.20 E-value=13 Score=27.29 Aligned_cols=34 Identities=9% Similarity=0.248 Sum_probs=25.7
Q ss_pred EEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccC
Q 014387 226 ICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKS 263 (425)
Q Consensus 226 I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d 263 (425)
|-+|+...|++|+.....|.+ .+++++.+-|..+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~----~~i~~~~~~i~~~ 36 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSS----KGVSFQELPIDGN 36 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHH----HTCCCEEEECTTC
T ss_pred EEEEECCCChhHHHHHHHHHH----CCCCcEEEECCCC
Confidence 567887779999876665544 4889998888754
No 494
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=59.01 E-value=14 Score=33.74 Aligned_cols=56 Identities=7% Similarity=0.026 Sum_probs=36.5
Q ss_pred cCCe-EEEEE-eCCC-cchHHHHHHHHHHHHHH-cCCCeeEEEeccCCChhHHhhhhhhhh
Q 014387 221 AEGR-YICLY-GGED-MDWIRKFTTATNAVAKT-AGIPLGMVYVGKSNPKDRVRRNNDTIA 277 (425)
Q Consensus 221 ~egk-~I~lY-~g~d-~~w~r~FT~~l~~~~k~-~~~~~Eiv~Vs~d~~~e~f~~~~~~i~ 277 (425)
..|| .+-|+ +.++ |++|+.=.+.+.++..+ .+..++++.||.|. .++-+++.+.|.
T Consensus 28 ~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~-~~~~~~~~~~i~ 87 (220)
T 1xcc_A 28 YIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNS-KESHDKWIEDIK 87 (220)
T ss_dssp HTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred HcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-HHHHHHHHHHHH
Confidence 3565 44444 4566 99998777777776443 35689999999985 344455555443
No 495
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=58.65 E-value=17 Score=32.24 Aligned_cols=53 Identities=8% Similarity=0.015 Sum_probs=35.7
Q ss_pred cCCeEEEEEe--CCCcchHHH-HHHHHHHHHHH-cCCCee-EEEeccCCChhHHhhhhh
Q 014387 221 AEGRYICLYG--GEDMDWIRK-FTTATNAVAKT-AGIPLG-MVYVGKSNPKDRVRRNND 274 (425)
Q Consensus 221 ~egk~I~lY~--g~d~~w~r~-FT~~l~~~~k~-~~~~~E-iv~Vs~d~~~e~f~~~~~ 274 (425)
..||.+-|+| ++.|++|+. =.+.+.+.+++ .+..++ ++-||.|. .+..+++.+
T Consensus 54 ~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~-~~~~~~f~~ 111 (184)
T 3uma_A 54 FKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVND-LHVMGAWAT 111 (184)
T ss_dssp HTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSC-HHHHHHHHH
T ss_pred hCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCC-HHHHHHHHH
Confidence 5677544443 777999998 57888877543 345688 99999974 344444443
No 496
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=57.84 E-value=13 Score=28.18 Aligned_cols=38 Identities=13% Similarity=0.279 Sum_probs=28.5
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHHcCCCeeEEEeccCCC
Q 014387 224 RYICLYGGEDMDWIRKFTTATNAVAKTAGIPLGMVYVGKSNP 265 (425)
Q Consensus 224 k~I~lY~g~d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~d~~ 265 (425)
+.|-||+...|++|+.-...| ++.++++|.+-|...+.
T Consensus 12 ~~v~ly~~~~Cp~C~~~~~~L----~~~gi~~~~~~v~~~~~ 49 (92)
T 3ic4_A 12 AEVLMYGLSTCPHCKRTLEFL----KREGVDFEVIWIDKLEG 49 (92)
T ss_dssp SSSEEEECTTCHHHHHHHHHH----HHHTCCCEEEEGGGCCH
T ss_pred ceEEEEECCCChHHHHHHHHH----HHcCCCcEEEEeeeCCc
Confidence 447789888899998755444 45589999999986543
No 497
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=57.66 E-value=21 Score=27.04 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=26.1
Q ss_pred EEEEeCC----CcchHHHHHHHHHHHHHHcCCCeeEEEecc
Q 014387 226 ICLYGGE----DMDWIRKFTTATNAVAKTAGIPLGMVYVGK 262 (425)
Q Consensus 226 I~lY~g~----d~~w~r~FT~~l~~~~k~~~~~~Eiv~Vs~ 262 (425)
|-||+.. .|+.|+ ++++++++.++++|.+-|..
T Consensus 2 v~iY~~~~~~~~Cp~C~----~ak~~L~~~gi~y~~idI~~ 38 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCD----NAKRLLTVKKQPFEFINIMP 38 (87)
T ss_dssp EEEEECCTTTSCCHHHH----HHHHHHHHTTCCEEEEESCS
T ss_pred EEEEEeCCCCCcCccHH----HHHHHHHHcCCCEEEEEeec
Confidence 5689988 899885 45566677799999999974
No 498
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=57.20 E-value=6.8 Score=34.03 Aligned_cols=45 Identities=2% Similarity=-0.126 Sum_probs=34.6
Q ss_pred ccCCeEEEEEeCCC---cchHHHHHHHHHHHHHHcCCC-eeEEEeccCC
Q 014387 220 MAEGRYICLYGGED---MDWIRKFTTATNAVAKTAGIP-LGMVYVGKSN 264 (425)
Q Consensus 220 ~~egk~I~lY~g~d---~~w~r~FT~~l~~~~k~~~~~-~Eiv~Vs~d~ 264 (425)
+..++.+.++|.++ |+|||...|.+.+++++.+.. +.++-|.-|.
T Consensus 31 v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe 79 (140)
T 2qgv_A 31 LTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ 79 (140)
T ss_dssp HHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH
T ss_pred HhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC
Confidence 33455566777776 789999999999998886666 8888887764
No 499
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=57.12 E-value=17 Score=28.24 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=26.8
Q ss_pred EEEEEeCCCcchHHHHHHHHHHHHHHcCCC---eeEEEeccCCC
Q 014387 225 YICLYGGEDMDWIRKFTTATNAVAKTAGIP---LGMVYVGKSNP 265 (425)
Q Consensus 225 ~I~lY~g~d~~w~r~FT~~l~~~~k~~~~~---~Eiv~Vs~d~~ 265 (425)
.|-+|+...|++|+...+.|.+. +++ ++.+-|..+.+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~----~~~~~~~~~vdi~~~~~ 52 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQL----PFKEGLLEFVDITATSD 52 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHS----CBCTTSEEEEEGGGSTT
T ss_pred CEEEEEcCCCHhHHHHHHHHHHc----CCCCCccEEEEccCCCC
Confidence 36677777799999877766554 555 88888877643
No 500
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=56.96 E-value=16 Score=33.14 Aligned_cols=54 Identities=7% Similarity=0.076 Sum_probs=37.9
Q ss_pred cCCeEEEEEe--CCCcchHH-HHHHHHHHHHHH-cCCCe-eEEEeccCCChhHHhhhhhh
Q 014387 221 AEGRYICLYG--GEDMDWIR-KFTTATNAVAKT-AGIPL-GMVYVGKSNPKDRVRRNNDT 275 (425)
Q Consensus 221 ~egk~I~lY~--g~d~~w~r-~FT~~l~~~~k~-~~~~~-Eiv~Vs~d~~~e~f~~~~~~ 275 (425)
..||.+.|+| ++.|++|+ .=.+.+.+++++ .+..+ +++-||.|. .+..+++.+.
T Consensus 31 ~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~-~~~~~~~~~~ 89 (241)
T 1nm3_A 31 FDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVND-TFVMNAWKED 89 (241)
T ss_dssp HTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC-HHHHHHHHHH
T ss_pred hCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCC-HHHHHHHHHh
Confidence 5788877777 55599999 677888777433 34578 999999875 4455554443
Done!