Query 014388
Match_columns 425
No_of_seqs 119 out of 1177
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 10:41:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014388.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014388hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.2E-82 1.1E-86 637.3 44.5 415 3-425 12-439 (439)
2 2xr7_A Malonyltransferase; xen 100.0 1E-72 3.5E-77 570.9 34.9 410 3-424 6-448 (453)
3 2bgh_A Vinorine synthase; VS, 100.0 3.3E-71 1.1E-75 554.3 33.6 389 3-424 9-413 (421)
4 2e1v_A Acyl transferase; BAHD 100.0 4.3E-71 1.5E-75 559.0 34.3 406 3-424 11-448 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 3.2E-64 1.1E-68 508.7 36.8 393 17-421 4-440 (451)
6 1q9j_A PAPA5, polyketide synth 99.2 3.5E-09 1.2E-13 104.6 26.7 281 16-333 6-313 (422)
7 1l5a_A Amide synthase, VIBH; n 98.8 1.9E-05 6.4E-10 78.1 33.7 251 46-333 32-304 (436)
8 2jgp_A Tyrocidine synthetase 3 98.7 3.1E-06 1.1E-10 86.0 25.9 278 15-333 94-400 (520)
9 4hvm_A Tlmii; PSI-biology, mid 98.7 3.8E-07 1.3E-11 92.2 18.5 290 14-333 10-327 (493)
10 2xhg_A Tyrocidine synthetase A 98.6 7.9E-06 2.7E-10 81.6 24.4 295 14-335 14-337 (466)
11 2vsq_A Surfactin synthetase su 98.3 0.00015 5.1E-09 81.8 26.5 288 16-333 11-327 (1304)
12 3fot_A 15-O-acetyltransferase; 98.3 0.00021 7.3E-09 72.2 23.7 362 45-424 71-512 (519)
13 3cla_A Type III chloramphenico 71.6 2.6 8.8E-05 36.9 3.3 45 129-173 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 70.7 2.8 9.5E-05 36.8 3.3 44 129-172 171-216 (217)
15 1q23_A Chloramphenicol acetylt 69.9 2.9 0.0001 36.7 3.3 44 130-173 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 66.8 3.8 0.00013 36.5 3.4 29 145-173 204-232 (239)
17 1scz_A E2, dihydrolipoamide su 65.4 4.1 0.00014 36.1 3.3 30 145-174 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 65.0 4.1 0.00014 36.3 3.3 29 145-173 208-236 (243)
19 3rqc_A Probable lipoamide acyl 65.0 3.6 0.00012 36.3 2.8 30 145-174 187-216 (224)
20 2ii3_A Lipoamide acyltransfera 63.3 4.6 0.00016 36.5 3.3 29 145-173 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 58.5 6.4 0.00022 35.4 3.3 30 145-174 210-239 (256)
22 3l60_A Branched-chain alpha-ke 57.4 6.9 0.00023 35.1 3.3 30 145-174 205-234 (250)
23 2xl1_A Arginine attenuator pep 53.1 11 0.00038 19.8 2.3 19 249-267 6-24 (26)
24 2kl8_A OR15; structural genomi 40.9 80 0.0027 21.3 5.6 37 47-83 10-47 (85)
25 2an7_A Protein PARD; bacterial 38.9 45 0.0015 23.8 4.3 35 223-261 1-35 (83)
26 4hhu_A OR280; engineered prote 38.9 48 0.0016 25.5 4.8 45 32-83 84-129 (170)
27 4hhu_A OR280; engineered prote 38.6 49 0.0017 25.4 4.8 43 34-83 5-48 (170)
28 3dva_I Dihydrolipoyllysine-res 37.5 7 0.00024 38.0 0.0 29 145-173 391-419 (428)
29 3qoq_A Alginate and motility r 37.1 1E+02 0.0035 21.3 6.2 48 220-271 16-63 (69)
30 1p94_A Plasmid partition prote 35.2 73 0.0025 22.5 5.1 42 220-265 31-72 (76)
31 1x93_A Hypothetical protein HP 34.8 88 0.003 19.9 5.7 23 224-246 2-24 (55)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.2e-82 Score=637.29 Aligned_cols=415 Identities=30% Similarity=0.588 Sum_probs=357.3
Q ss_pred CceeeeCCCCCCCCeeeCCcccccccc-ceeEEEEeeCCCCCCchhHHHHHHHHHHHHhhhhccCCceeeecCCCcEEEE
Q 014388 3 EPVFIQPETETCKEPYFLSSLDHAVID-MMKTVYIYKLDGKKSGVEARDLIKQALAKVLVHYYPLAGRLRRSSSGNLFVE 81 (425)
Q Consensus 3 ~~~~v~P~~~~~~~~~~Ls~lD~~~~~-y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~ 81 (425)
++++|+|+.+||.+.++||+||+.++. |++.+|||+.++. +....+++||+||+++|.+||+|||||+.+++|+++|+
T Consensus 12 ~~~~V~P~~~tp~~~~~LS~lD~~~~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~ 90 (439)
T 4g22_A 12 ESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGRLKRDEDGRIEIE 90 (439)
T ss_dssp EEEEECCSSCCCCCEECCCHHHHSCCTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCEEEECTTSCEEEE
T ss_pred eeEEEeCCCCCCCCeecCChhHhCccccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhccccceeeeeCCCCCEEEE
Confidence 578999999999999999999999776 9999999987543 23356899999999999999999999999888999999
Q ss_pred ecCCCCCeeEEEEeecCChhhhcCCCCCChHHHhccccCCCCCCcccCCCeEEEEEeEeccCcEEEEeeeeeeecchhhH
Q 014388 82 CNNSIKGVPFVEAVADSEIEKLGDITVPDTVMLENLVYDVPGVENILEMPLMTAQVTRFKCGGLVFGMAINHCMVDGISA 161 (425)
Q Consensus 82 ~~~~~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~p~~~~~~~~pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~ 161 (425)
||++ ||.|++++++++++|+.+.. |.. .+++|+|..+...+..+.|++.||||+|.|||++||+++||.++||.|+
T Consensus 91 c~~~--Gv~fv~A~~d~~l~~l~~~~-p~~-~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~ 166 (439)
T 4g22_A 91 CNGE--GVLFVEAESDGVVDDFGDFA-PTL-ELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSG 166 (439)
T ss_dssp CCCC--CEEEEEEEESSCGGGGTTCC-CCG-GGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHH
T ss_pred ECCC--CCEEEEEEcCCcHHHhcCCC-CCH-HHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHH
Confidence 9999 99999999999999997643 665 6778887665433445789999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCCCccccccCCccccccc--ccc-cceeEEEEEeCHHHHHHH
Q 014388 162 MQFVNSWAETARGITLTMPPVLDRSILMPKKPSVDKNDSETLTEVEISDVSKIETL--YQE-QKMICKSFKFDQNRLAGL 238 (425)
Q Consensus 162 ~~fl~~wa~~~rg~~~~~~P~~dr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~i~~L 238 (425)
.+|+++||+++||.+.+.+|++||+.+..+++| ....+|.+|...++....... ..+ .+++.++|+|++++|++|
T Consensus 167 ~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~L 244 (439)
T 4g22_A 167 LHFINSWSDMARGLDVTLPPFIDRTLLRARDPP--QPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISAL 244 (439)
T ss_dssp HHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSC--CCSSCCGGGSCCC---------------CEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCccccccccCCCCC--CCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHHHHH
Confidence 999999999999987667899999999887777 555667777654432211100 112 568999999999999999
Q ss_pred HHHHhhcCCCccccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEeccCCcCCCCCCCCCcccceeEeeeeccchhhhhcC
Q 014388 239 KKKAMENGELTYCSSFTVLAAFLWRARSQALKMKPQQQTKLVFTVDIRSKLKTNPLPKGFFGNGVLVTQCLCTAEELVQK 318 (425)
Q Consensus 239 k~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~~p~lp~~y~GN~~~~~~~~~~~~~l~~~ 318 (425)
|+++.++....++|++|+|+|++|+|+++||++++++.+++.++||+|+|++ ||+|++||||++..+.+.++++||.++
T Consensus 245 K~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~-Pplp~~Y~GN~v~~~~~~~~~~el~~~ 323 (439)
T 4g22_A 245 KAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLR-PSLPPGYFGNVIFTATPIAIAGDLEFK 323 (439)
T ss_dssp HHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSS-SCCCTTBCSCCEEEECCEEEHHHHHHS
T ss_pred HHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCC-CCCCCCcccceeehhhcceEHHHHhhC
Confidence 9999875433579999999999999999999988888999999999999999 999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhcchhHHHHHHHhhh-cCCCC-C-----CC-CCeEEEEccCCCCccccccCCCccceeeecc-cCC
Q 014388 319 PFSFAVKMVQNAIQMVNEDYIKGFIESFD-VNARP-P-----SW-TATLVITSWTRIAFNAADFGWGEPTQFGSTR-IPK 389 (425)
Q Consensus 319 ~l~~~A~~iR~ai~~~~~~~~~~~~~~~~-~~~~p-~-----~~-~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~-~~~ 389 (425)
+|+++|.+||+++.+++++|+++.++|++ ..+.. . .+ ..++.+|||+++++|++|||||+|+++++.. ..+
T Consensus 324 ~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~ 403 (439)
T 4g22_A 324 PVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYE 403 (439)
T ss_dssp CHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSCCST
T ss_pred cHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeeccccCCC
Confidence 99999999999999999999999999987 32211 1 11 4589999999999999999999999999876 677
Q ss_pred ceEEEecCCCCCCcEEEEEeCCHHHHHHHHHHHhhC
Q 014388 390 EVGLFIPEGKDKNGIVLVLGLPVSAMNTFQELITSI 425 (425)
Q Consensus 390 ~~~~ilp~~~~~gg~~v~v~L~~~~m~~l~~~~~~~ 425 (425)
|.++++|.++++||++|.|+|++++|++|+++|+++
T Consensus 404 g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~~ 439 (439)
T 4g22_A 404 GLSFILPSPTNDGSMSVAISLQGEHMKLFQSFLYDI 439 (439)
T ss_dssp TEEEEEECTTCSSCEEEEEEEEHHHHHHHHHHHTCC
T ss_pred cEEEEeecCCCCCcEEEEEECCHHHHHHHHHHhccC
Confidence 899999987778999999999999999999999864
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1e-72 Score=570.90 Aligned_cols=410 Identities=21% Similarity=0.338 Sum_probs=330.5
Q ss_pred CceeeeCCCC-CCCCeeeCCccccccc-c-ceeEEEEeeCCCCCC--chhHHHHHHHHHHHHhhhhccCCceeeecC--C
Q 014388 3 EPVFIQPETE-TCKEPYFLSSLDHAVI-D-MMKTVYIYKLDGKKS--GVEARDLIKQALAKVLVHYYPLAGRLRRSS--S 75 (425)
Q Consensus 3 ~~~~v~P~~~-~~~~~~~Ls~lD~~~~-~-y~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~--~ 75 (425)
++++|+|+.+ ++.+.++||+||+.+. . |++.+|||+.++..+ ....+++||+||+++|.+||+|||||+.++ +
T Consensus 6 ~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~ 85 (453)
T 2xr7_A 6 EQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACPQDWS 85 (453)
T ss_dssp EESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEESSTT
T ss_pred EEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEccCCCC
Confidence 5688999977 5668999999999854 5 999999998754322 235689999999999999999999999875 7
Q ss_pred CcEEEEec-CCCCCeeEEEEeecCChhhhcCCC-CCChHHHhccccCCCCCCc---ccCCCeEEEEEeEeccCcEEEEee
Q 014388 76 GNLFVECN-NSIKGVPFVEAVADSEIEKLGDIT-VPDTVMLENLVYDVPGVEN---ILEMPLMTAQVTRFKCGGLVFGMA 150 (425)
Q Consensus 76 g~~~i~~~-~~~~gv~f~~~~~~~s~~~l~~~~-~p~~~~~~~l~~~~p~~~~---~~~~pll~vqvt~f~~GG~~l~~~ 150 (425)
|+++|+|+ ++ ||.|++++++.+++++.... .|.. .+..++|..+...+ ..+.|++.+|||+|.|||++||++
T Consensus 86 g~~~i~c~~~~--gv~fv~A~~~~~l~~l~~~~~~~~~-~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~ 162 (453)
T 2xr7_A 86 GYPELRYVTGN--SVSVIFSESDMDFNYLIGYHPRNTK-DFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFT 162 (453)
T ss_dssp CCCEEEEETTC--CCEEEEEECCSCHHHHTCSSCCCGG-GGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEEEE
T ss_pred CCEEEEecCCC--ceEEEEEecCCCHHHhhccCCCChh-hhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEEEe
Confidence 99999998 58 99999999999999996422 2333 56678775443211 122799999999999999999999
Q ss_pred eeeeecchhhHHHHHHHHHHHhc-CC-C----CCCCCCCCccccCCCCCCCCCCCCCCc-cccccCCcccccccccccce
Q 014388 151 INHCMVDGISAMQFVNSWAETAR-GI-T----LTMPPVLDRSILMPKKPSVDKNDSETL-TEVEISDVSKIETLYQEQKM 223 (425)
Q Consensus 151 ~~H~v~Dg~~~~~fl~~wa~~~r-g~-~----~~~~P~~dr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 223 (425)
+||.++||.|+.+|+++||+++| |. + +...|++||+.+.. ++ .+...+. .+...+..........+.+.
T Consensus 163 ~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~--p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (453)
T 2xr7_A 163 NHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKD--PN--GVGMSIWNEMKKYKHMMKMSDVVTPPDK 238 (453)
T ss_dssp ECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCC--SS--CHHHHTTTTGGGCTTTSCCSCCCCCCSC
T ss_pred eeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccC--CC--CcchHHHHhccccCCccccccccCCCCc
Confidence 99999999999999999999999 86 3 23468999987762 22 2110111 11000100000000123467
Q ss_pred eEEEEEeCHHHHHHHHHHHhhcCCC-ccccHHHHHHHHHHHHHHHhcCC-----CCCCcEEEEEEeccCCcCCCCCCCCC
Q 014388 224 ICKSFKFDQNRLAGLKKKAMENGEL-TYCSSFTVLAAFLWRARSQALKM-----KPQQQTKLVFTVDIRSKLKTNPLPKG 297 (425)
Q Consensus 224 ~~~~~~~~~~~i~~Lk~~~~~~~~~-~~~S~~d~l~A~lW~~~~~ar~~-----~~~~~~~l~~~vd~R~rl~~p~lp~~ 297 (425)
..++|+|++++|++||+++.++... .++|++|+|+|++|+|+++||.. ++++.+++.++||+|+|++ ||+|++
T Consensus 239 ~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~-pplP~~ 317 (453)
T 2xr7_A 239 VRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFN-PPLPPS 317 (453)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSS-SCCCTT
T ss_pred eEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCC-CCCCcc
Confidence 7899999999999999999865432 57999999999999999999975 5678899999999999999 999999
Q ss_pred cccceeEeeeeccchhhhh-cCcHHHHHHHHHHHHHh--cchh-HHHHHHHhhh-cCCCCCCCCCeEEEEccCCCCcccc
Q 014388 298 FFGNGVLVTQCLCTAEELV-QKPFSFAVKMVQNAIQM--VNED-YIKGFIESFD-VNARPPSWTATLVITSWTRIAFNAA 372 (425)
Q Consensus 298 y~GN~~~~~~~~~~~~~l~-~~~l~~~A~~iR~ai~~--~~~~-~~~~~~~~~~-~~~~p~~~~~~~~~ssw~~~~~~~~ 372 (425)
||||++..+.+.++++||. +.+|+++|.+||+++.+ .+++ ++++ +|++ .++. ....++.+|||+++++|++
T Consensus 318 Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~~--~~~~~~~vssw~~~~~y~~ 393 (453)
T 2xr7_A 318 YFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDKV--DAKRSLSVAGSPKLDLYAA 393 (453)
T ss_dssp BCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCCS--CGGGEEEECSCSSCCGGGC
T ss_pred cccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHhh--ccCCcEEEeccccCCcccc
Confidence 9999999999999999999 48999999999999999 5778 8988 8877 3321 1235899999999999999
Q ss_pred ccCCCccceeeecc-cCCc--eEEEecCCCCCCcEEEEEeCCHHHHHHHHHHHhh
Q 014388 373 DFGWGEPTQFGSTR-IPKE--VGLFIPEGKDKNGIVLVLGLPVSAMNTFQELITS 424 (425)
Q Consensus 373 DFG~G~P~~~~~~~-~~~~--~~~ilp~~~~~gg~~v~v~L~~~~m~~l~~~~~~ 424 (425)
|||||+|.++++.. ..+| .++++|.++++||++|.|+|++++|++|+++|.+
T Consensus 394 DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~~~~~ 448 (453)
T 2xr7_A 394 DFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAAMFTH 448 (453)
T ss_dssp CCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHHHHHH
T ss_pred ccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHHHHHH
Confidence 99999999999876 5567 7778887777899999999999999999999875
No 3
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3.3e-71 Score=554.28 Aligned_cols=389 Identities=25% Similarity=0.444 Sum_probs=322.2
Q ss_pred CceeeeCCCCCCC--CeeeCCcccccccc-ceeEEEEeeCCCCC--CchhHHHHHHHHHHHHhhhhccCCceeeecCCCc
Q 014388 3 EPVFIQPETETCK--EPYFLSSLDHAVID-MMKTVYIYKLDGKK--SGVEARDLIKQALAKVLVHYYPLAGRLRRSSSGN 77 (425)
Q Consensus 3 ~~~~v~P~~~~~~--~~~~Ls~lD~~~~~-y~~~~~~f~~~~~~--~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~ 77 (425)
++++|+|+.|||. +.++||.||+..+. |++.+|||+.++.. +....+++||+||+++|.+||+|||||+. +
T Consensus 9 ~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~----~ 84 (421)
T 2bgh_A 9 SEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRINV----N 84 (421)
T ss_dssp EEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEET----T
T ss_pred eeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccCC----C
Confidence 6789999988875 48999999998766 99999999875431 34568999999999999999999999962 5
Q ss_pred EEEEecCCCCCeeEEEEeecCChhhhcCCCCCChHHHhccccCCCCCCc----ccCCCeEEEEEeEeccCcEEEEeeeee
Q 014388 78 LFVECNNSIKGVPFVEAVADSEIEKLGDITVPDTVMLENLVYDVPGVEN----ILEMPLMTAQVTRFKCGGLVFGMAINH 153 (425)
Q Consensus 78 ~~i~~~~~~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~p~~~~----~~~~pll~vqvt~f~~GG~~l~~~~~H 153 (425)
++|+|+++ ||.|++++++++++++.+.. |....++.++|..+ ..+ ..+.|++.+|||+|.|||++||+++||
T Consensus 85 ~~i~c~~~--Gv~fv~A~~d~~l~~~~~~~-p~~~~~~~l~p~~~-~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H 160 (421)
T 2bgh_A 85 SSVDCNDS--GVPFVEARVQAQLSQAIQNV-VELEKLDQYLPSAA-YPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSH 160 (421)
T ss_dssp TEEECCCC--CEEEEEEEESSCHHHHHSCC-SSGGGGGGGSSSCS-SSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEET
T ss_pred cEEEEcCC--ceEEEEEEEcCCHHHHhccC-CChHHHHhcCCCCC-CccccccccCCceEEEEEEEEcCCCEEEEEEeeE
Confidence 89999999 99999999999999997531 44335667776432 111 346899999999999999999999999
Q ss_pred eecchhhHHHHHHHHHHHhcCCCCCCCCCCCc-cccCCC--CCCCCCCCCCCccccccCCcccccccccccceeEEEEEe
Q 014388 154 CMVDGISAMQFVNSWAETARGITLTMPPVLDR-SILMPK--KPSVDKNDSETLTEVEISDVSKIETLYQEQKMICKSFKF 230 (425)
Q Consensus 154 ~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr-~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (425)
.++||.|+.+|+++||+++||.+...+|++|| +.+.+. +++ . +. .....+...++|+|
T Consensus 161 ~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~p~~~~~~--~-----~~------------~~~~~~~~~~~f~f 221 (421)
T 2bgh_A 161 KIADVLSLATFLNAWTATCRGETEIVLPNFDLAARHFPPVDNTP--S-----PE------------LVPDENVVMKRFVF 221 (421)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHSCCCTTCC--C-----CC------------CCCCSSEEEEEEEE
T ss_pred EechHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCcccCC--C-----Cc------------cCCccceEEEEEEE
Confidence 99999999999999999999976446789999 655421 211 1 00 01235688999999
Q ss_pred CHHHHHHHHHHHhhcCCCccccHHHHHHHHHHHHHHHhcCCC--CCCcEEEEEEeccCCcCCCCCCCCCcccceeEeeee
Q 014388 231 DQNRLAGLKKKAMENGELTYCSSFTVLAAFLWRARSQALKMK--PQQQTKLVFTVDIRSKLKTNPLPKGFFGNGVLVTQC 308 (425)
Q Consensus 231 ~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~--~~~~~~l~~~vd~R~rl~~p~lp~~y~GN~~~~~~~ 308 (425)
++++|++||+++.++....++|++|+|+|++|+|+++||... +++.+++.++||+|+|++ ||+|++||||++..+.+
T Consensus 222 ~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~-pplP~~y~GN~~~~~~~ 300 (421)
T 2bgh_A 222 DKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMN-PPLPHYAMGNIATLLFA 300 (421)
T ss_dssp CHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSS-SCCCTTBCSCCEEEEEE
T ss_pred CHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccC-CCCCCCccceEEEEEEE
Confidence 999999999999765433579999999999999999998642 467899999999999999 99999999999999988
Q ss_pred ccchhhhhcCcHHHHHHHHHHHHHhcchhHHHHHHHhhh-cCCCCCCCCCeEEEEccCCCCccccccCCCccceeeecc-
Q 014388 309 LCTAEELVQKPFSFAVKMVQNAIQMVNEDYIKGFIESFD-VNARPPSWTATLVITSWTRIAFNAADFGWGEPTQFGSTR- 386 (425)
Q Consensus 309 ~~~~~~l~~~~l~~~A~~iR~ai~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~- 386 (425)
.+++++ +.+|+++|.+||+++.++++++++...++.+ ....+ ....+.+|||+++++|++|||||+|.++++..
T Consensus 301 ~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~ 376 (421)
T 2bgh_A 301 AVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELE--PQELLSFTSWCRLGFYDLDFGWGKPLSACTTTF 376 (421)
T ss_dssp EECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHTSC--GGGEEEEEEETTSCGGGCCSSSCCCSEEECCCC
T ss_pred Eecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCeEEEeccccCCCcccccCCCccCeeccccc
Confidence 887776 7899999999999999999999998888765 22111 13579999999999999999999999999876
Q ss_pred cCCceEEEecCCCCCCcEEEEEeCCHHHHHHHHHHHhh
Q 014388 387 IPKEVGLFIPEGKDKNGIVLVLGLPVSAMNTFQELITS 424 (425)
Q Consensus 387 ~~~~~~~ilp~~~~~gg~~v~v~L~~~~m~~l~~~~~~ 424 (425)
+.+|+++++|.++ ++|++|.|+|++++|++|+++|.+
T Consensus 377 ~~~g~~~~~p~~~-~~gi~v~v~L~~~~m~~f~~e~~~ 413 (421)
T 2bgh_A 377 PKRNAALLMDTRS-GDGVEAWLPMAEDEMAMLPVELLS 413 (421)
T ss_dssp CSTTEEEEEECTT-SSSEEEEEEEEHHHHHHSCHHHHT
T ss_pred CcCCEEEEEecCC-CCeEEEEEEcCHHHHHHHHHHHHH
Confidence 5678889999775 458999999999999999998865
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=4.3e-71 Score=559.01 Aligned_cols=406 Identities=21% Similarity=0.342 Sum_probs=322.0
Q ss_pred CceeeeCCCC-CCCCeeeCCccccccc-c-ceeEEEEeeCCCCCC--chhHHHHHHHHHHHHhhhhccCCceee-ec-CC
Q 014388 3 EPVFIQPETE-TCKEPYFLSSLDHAVI-D-MMKTVYIYKLDGKKS--GVEARDLIKQALAKVLVHYYPLAGRLR-RS-SS 75 (425)
Q Consensus 3 ~~~~v~P~~~-~~~~~~~Ls~lD~~~~-~-y~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl~-~~-~~ 75 (425)
++++|+|+.+ ++.+.++||+||+.+. . |++.+|||+.++..+ ....+++||+||+++|.+||+|||||+ .+ ++
T Consensus 11 ~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~ 90 (454)
T 2e1v_A 11 EQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPT 90 (454)
T ss_dssp EEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEEEECSSSS
T ss_pred EEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceeeeeccCCC
Confidence 5689999987 5678999999999854 5 999999998654211 234689999999999999999999998 65 56
Q ss_pred CcEEEEec-CCCCCeeEEEEeecCChhhhcCCCC-CChHHHhccccCCCCCC---cccCCCeEEEEEeEeccCcEEEEee
Q 014388 76 GNLFVECN-NSIKGVPFVEAVADSEIEKLGDITV-PDTVMLENLVYDVPGVE---NILEMPLMTAQVTRFKCGGLVFGMA 150 (425)
Q Consensus 76 g~~~i~~~-~~~~gv~f~~~~~~~s~~~l~~~~~-p~~~~~~~l~~~~p~~~---~~~~~pll~vqvt~f~~GG~~l~~~ 150 (425)
|+++|+|+ ++ ||.|++++++.+++++..... |.. .++.++|..+... +..+.|++.+|||+|.|||++||++
T Consensus 91 g~~~i~c~~~~--gv~fv~A~~~~~l~~l~~~~~~~~~-~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~lg~~ 167 (454)
T 2e1v_A 91 KKPEICYVEGD--SVAVTFAECNLDLNELTGNHPRNCD-KFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGIT 167 (454)
T ss_dssp SCCEEEECTTC--CEEEEEEEECSCGGGTSSSSCEEGG-GGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEEEEEE
T ss_pred CCEEEEECCCC--cEEEEEEEeCCCHHHhcCCCCCcch-hhhcCCCCCCCcccccccccCceEEEEEEEecCCcEEEEEE
Confidence 99999998 58 999999999999999964221 333 5667877654321 1234599999999999999999999
Q ss_pred eeeeecchhhHHHHHHHHHHHhc-CCC------CCCCCCCCccccCCCCCCCCCCCCCCc-cccccCC---ccccccccc
Q 014388 151 INHCMVDGISAMQFVNSWAETAR-GIT------LTMPPVLDRSILMPKKPSVDKNDSETL-TEVEISD---VSKIETLYQ 219 (425)
Q Consensus 151 ~~H~v~Dg~~~~~fl~~wa~~~r-g~~------~~~~P~~dr~~l~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~ 219 (425)
+||.++||.|+.+|+++||+++| |.. +...|++|| .+. +|+ +...+. .+..... ..... ...
T Consensus 168 ~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~--~p~---~~~~~~~~~~~~~~~~~~~~~~-~~~ 240 (454)
T 2e1v_A 168 NHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIK--YPM---LDEAYLKRAKVESFNEDYVTQS-LAG 240 (454)
T ss_dssp ECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCC--CHH---HHHHHHHHTTCTTHHHHCCCCC-CCC
T ss_pred eeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCC--CCC---cchHHHHhhhccccccccCccc-CCC
Confidence 99999999999999999999999 863 145789999 664 211 100000 0100000 00000 002
Q ss_pred ccceeEEEEEeCHHHHHHHHHHHhhcCCC-ccccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEeccCCcCCCCCCCCCc
Q 014388 220 EQKMICKSFKFDQNRLAGLKKKAMENGEL-TYCSSFTVLAAFLWRARSQALKMKPQQQTKLVFTVDIRSKLKTNPLPKGF 298 (425)
Q Consensus 220 ~~~~~~~~~~~~~~~i~~Lk~~~~~~~~~-~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~~p~lp~~y 298 (425)
+.+...++|+|++++|++||+++.++... .++|++|+|+|++|+|+++|| +++.+++.++||+|+|++ ||+|++|
T Consensus 241 ~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~~vd~R~rl~-pplP~~Y 316 (454)
T 2e1v_A 241 PSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFPIDRRARMK-PPIPTAY 316 (454)
T ss_dssp CCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEEECGGGSS-SCCCTTB
T ss_pred CCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---CCCceEEEEEecchhccC-CCCCccc
Confidence 35677999999999999999999865432 579999999999999999999 578899999999999999 9999999
Q ss_pred ccceeEeeeeccchhhhhc-CcHHHHHHHHHHHHHhcc----hhHHHH-HHHhhh-cCCCCCCCCCeEEEEccCCCCccc
Q 014388 299 FGNGVLVTQCLCTAEELVQ-KPFSFAVKMVQNAIQMVN----EDYIKG-FIESFD-VNARPPSWTATLVITSWTRIAFNA 371 (425)
Q Consensus 299 ~GN~~~~~~~~~~~~~l~~-~~l~~~A~~iR~ai~~~~----~~~~~~-~~~~~~-~~~~p~~~~~~~~~ssw~~~~~~~ 371 (425)
|||++..+.+.++++||.. .+|+++|.+||+++.+++ ++++++ ..+|++ .+... ...++.+|||+++++|+
T Consensus 317 ~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vssw~~~~~y~ 394 (454)
T 2e1v_A 317 FGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGM--PTTMTWVSGTPKLRFYD 394 (454)
T ss_dssp CSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHHCC--CSEEEEEECCTTSCGGG
T ss_pred ccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhc--CCceEEEecCCCCCccc
Confidence 9999999999999999984 899999999999999987 444555 566665 22111 13489999999999999
Q ss_pred cccCCCccceeeecc-cCCceEEEecCCCCCCcEEEEEeCCHHHHHHHHHHHhh
Q 014388 372 ADFGWGEPTQFGSTR-IPKEVGLFIPEGKDKNGIVLVLGLPVSAMNTFQELITS 424 (425)
Q Consensus 372 ~DFG~G~P~~~~~~~-~~~~~~~ilp~~~~~gg~~v~v~L~~~~m~~l~~~~~~ 424 (425)
+|||||+|.++++.. ..+|.++++|.++++||++|.|+|++++|++|+++|.+
T Consensus 395 ~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~ 448 (454)
T 2e1v_A 395 MDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVHIFDD 448 (454)
T ss_dssp CCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHHHHHH
T ss_pred ccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHHHHHH
Confidence 999999999999876 56788889998877899999999999999999999875
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=3.2e-64 Score=508.72 Aligned_cols=393 Identities=16% Similarity=0.231 Sum_probs=306.9
Q ss_pred eeeCCcccccc--cc-ceeEEEEeeCCCCCCchhHHHHHHHHHHHHhhhhccCCceeeecC-----CCcEEEEecCCCCC
Q 014388 17 PYFLSSLDHAV--ID-MMKTVYIYKLDGKKSGVEARDLIKQALAKVLVHYYPLAGRLRRSS-----SGNLFVECNNSIKG 88 (425)
Q Consensus 17 ~~~Ls~lD~~~--~~-y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~-----~g~~~i~~~~~~~g 88 (425)
.++||.+||+. +. |++.+|||+.++..+....+++||+||+++|.+||+|||||+.++ +|+++|+|+++ +
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~--~ 81 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFED--V 81 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCS--S
T ss_pred cccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCC--C
Confidence 47999999997 45 999999999643212445789999999999999999999998764 58899998776 6
Q ss_pred eeEEEEeecC-----ChhhhcCCCCCChHHHhc--cccC--CCCC--C-cccCCCeEEEEEeEeccCcEEEEeeeeeeec
Q 014388 89 VPFVEAVADS-----EIEKLGDITVPDTVMLEN--LVYD--VPGV--E-NILEMPLMTAQVTRFKCGGLVFGMAINHCMV 156 (425)
Q Consensus 89 v~f~~~~~~~-----s~~~l~~~~~p~~~~~~~--l~~~--~p~~--~-~~~~~pll~vqvt~f~~GG~~l~~~~~H~v~ 156 (425)
..|++++++. +++++.+...|.. .++. +.|. .|.. . ...+.|++.+||| |.|||++||+++||.++
T Consensus 82 ~~~~va~~~~d~~~p~~~~l~~~~~p~~-~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~H~v~ 159 (451)
T 2rkv_A 82 PRVVVKDLRDDPSAPTIEGMRKAGYPMA-MFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQHGAM 159 (451)
T ss_dssp CEEEEEECTTCTTSCBHHHHHHHTSCGG-GSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEETTTC
T ss_pred CeEEEEeCCCCCCCCCHHHHHHcCCChh-hcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeehhccc
Confidence 7788887764 6777753234432 2321 2232 2211 1 2235899999999 77999999999999999
Q ss_pred chhhHHHHHHHHHHHhcCCCCC----CCCCCCccccCCC---CCCCCCCCCCCccccccCCcccccccccccceeEEEEE
Q 014388 157 DGISAMQFVNSWAETARGITLT----MPPVLDRSILMPK---KPSVDKNDSETLTEVEISDVSKIETLYQEQKMICKSFK 229 (425)
Q Consensus 157 Dg~~~~~fl~~wa~~~rg~~~~----~~P~~dr~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (425)
||.|+.+|+++||+++||.+.. ..|++||+.+.+. .+| .....+.+|...+.... ......++..++|+
T Consensus 160 Dg~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~f~ 235 (451)
T 2rkv_A 160 DMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTI--GPEVDHQIVKADVAGGD--AVLTPVSASWAFFT 235 (451)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCC--CGGGTTCBCCTTSCC---------CCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCC--CccccccccCCCCCCCC--CCCCCCCceEEEEE
Confidence 9999999999999999997532 2578998754432 223 22233444432211100 01123567899999
Q ss_pred eCHHHHHHHHHHHhhcCC--CccccHHHHHHHHHHHHHHHhc-C-CCCCCcEEEEEEeccCCcCCCCCCCCCcccceeEe
Q 014388 230 FDQNRLAGLKKKAMENGE--LTYCSSFTVLAAFLWRARSQAL-K-MKPQQQTKLVFTVDIRSKLKTNPLPKGFFGNGVLV 305 (425)
Q Consensus 230 ~~~~~i~~Lk~~~~~~~~--~~~~S~~d~l~A~lW~~~~~ar-~-~~~~~~~~l~~~vd~R~rl~~p~lp~~y~GN~~~~ 305 (425)
|++++|++||+++.++.. ..++|++|+|+|++|+|+++|| . .++++.+++.++||+|+|++ +|.+||||++..
T Consensus 236 f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~---lP~~y~GN~~~~ 312 (451)
T 2rkv_A 236 FSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG---VSNNYPGLLQNM 312 (451)
T ss_dssp ECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT---CCTTCCSCCEEE
T ss_pred ECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC---CCCCCcccceee
Confidence 999999999999986542 2579999999999999999998 3 56788999999999999998 899999999999
Q ss_pred eeeccchhhhhcCcHHHHHHHHHHHHHhcchhH-HHHHHHhhh-cCCCC-C------CCCCeEEEEccCCCCccccccC-
Q 014388 306 TQCLCTAEELVQKPFSFAVKMVQNAIQMVNEDY-IKGFIESFD-VNARP-P------SWTATLVITSWTRIAFNAADFG- 375 (425)
Q Consensus 306 ~~~~~~~~~l~~~~l~~~A~~iR~ai~~~~~~~-~~~~~~~~~-~~~~p-~------~~~~~~~~ssw~~~~~~~~DFG- 375 (425)
+.+.++++||.+.+|+++|.+||+++.+++.++ +++.++|++ .++.. + ..+.++.+|||+++++|++|||
T Consensus 313 ~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~ 392 (451)
T 2rkv_A 313 TYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGL 392 (451)
T ss_dssp EEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTTC
T ss_pred ecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCccccccCC
Confidence 999889999999999999999999999998888 999999998 33321 1 1245799999999999999998
Q ss_pred -CCccceeeecc--cCCceEEEecCCCCCCcEEEEEeCCHHHHHHHHHH
Q 014388 376 -WGEPTQFGSTR--IPKEVGLFIPEGKDKNGIVLVLGLPVSAMNTFQEL 421 (425)
Q Consensus 376 -~G~P~~~~~~~--~~~~~~~ilp~~~~~gg~~v~v~L~~~~m~~l~~~ 421 (425)
||+|.+++.+. +.+|.++++|. +++||++|.|+|++++|++|+++
T Consensus 393 gwG~P~~v~~~~~~~~~g~~~~~p~-~~~ggi~v~v~L~~~~m~~f~~d 440 (451)
T 2rkv_A 393 GLGKPETVRRPIFEPVESLMYFMPK-KPDGEFCAALSLRDEDMDRLKAD 440 (451)
T ss_dssp SSCSCSEEECCBCSCCTTEEEECCC-CTTSCEEEEEEEEHHHHHHHHHC
T ss_pred CCCCceEEEcCCccCCCCEEEEecC-CCCCCEEEEEEeCHHHHHHHhcC
Confidence 79999998654 46788889974 45789999999999999999863
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.24 E-value=3.5e-09 Score=104.61 Aligned_cols=281 Identities=16% Similarity=0.141 Sum_probs=165.2
Q ss_pred CeeeCCcccccccc--c-eeEEEEeeCCCCCCchhHHHHHHHHHHHHhhhhccCCceeeecCCCcEEEEecCCCCCee-E
Q 014388 16 EPYFLSSLDHAVID--M-MKTVYIYKLDGKKSGVEARDLIKQALAKVLVHYYPLAGRLRRSSSGNLFVECNNSIKGVP-F 91 (425)
Q Consensus 16 ~~~~Ls~lD~~~~~--y-~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~~~gv~-f 91 (425)
..+|||++++.+-. | +...+-++. ..+.++|++++.+++..+|.|..++....++.+.+..... ... +
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g------~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~--~~~~~ 77 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRG------VIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDL--LHSGI 77 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEES------CCCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCS--SSCCC
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEec------CCCHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCC--CCCce
Confidence 57899999876552 3 344444442 3688999999999999999999999875544443333322 222 2
Q ss_pred EEEeecCChhhhcCCCCCChHHHhccccCCCCCCcccCCCeEEEEEeEeccCcEEEEeeeeeeecchhhHHHHHHHHHHH
Q 014388 92 VEAVADSEIEKLGDITVPDTVMLENLVYDVPGVENILEMPLMTAQVTRFKCGGLVFGMAINHCMVDGISAMQFVNSWAET 171 (425)
Q Consensus 92 ~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~p~~~~~~~~pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~ 171 (425)
.+.+.. +..+ .. .+.+. ..+. + ...|++.+.+.. .+++..|.+.+||.++||.|+..|++.|.+.
T Consensus 78 ~~~d~~----~~~~---~~--~~~~~--~~~~--d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~ 142 (422)
T 1q9j_A 78 CVIDGT----AATN---GS--PSGNA--ELRL--D-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSR 142 (422)
T ss_dssp EEEC---------------------C--CCCC--C-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHH
T ss_pred EEEECC----CCCc---ch--hhhcc--cCcc--C-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHH
Confidence 222111 1000 00 11110 0111 2 467999999877 7778999999999999999999999999999
Q ss_pred hc-----CCCCCCCC--CCCc--cccCCCC-----CCCCCCCCCCccccc--cC---CcccccccccccceeEEEEEeCH
Q 014388 172 AR-----GITLTMPP--VLDR--SILMPKK-----PSVDKNDSETLTEVE--IS---DVSKIETLYQEQKMICKSFKFDQ 232 (425)
Q Consensus 172 ~r-----g~~~~~~P--~~dr--~~l~~~~-----~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~ 232 (425)
++ |.+...+| ..+- .....+. .+ .......+|+. ++ ..+.............+.+.+++
T Consensus 143 Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~ 220 (422)
T 1q9j_A 143 YTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLS--GAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSK 220 (422)
T ss_dssp HHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-------CTTSSTTTTCC-------------CCSBCCCCEEEECCCH
T ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccc--hhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCH
Confidence 87 33322222 1110 0000000 00 11011123321 01 00000001112234678889999
Q ss_pred HHHHHHHHHHhhcCCCccccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEeccCCcCCCCCCC----CCcccceeEeeee
Q 014388 233 NRLAGLKKKAMENGELTYCSSFTVLAAFLWRARSQALKMKPQQQTKLVFTVDIRSKLKTNPLP----KGFFGNGVLVTQC 308 (425)
Q Consensus 233 ~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~~p~lp----~~y~GN~~~~~~~ 308 (425)
+..++|++.|++.+ +|.++++.|.+-..+.+.+. .....+.+.+++++|.... |+++ .+.+|.++...
T Consensus 221 ~~~~~l~~~a~~~~----~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~~-~~~~~~~~~~~vG~f~n~l-- 292 (422)
T 1q9j_A 221 QQTSDLMAFGREHR----LSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVLA-PPVAPTEATNLLGAASYLA-- 292 (422)
T ss_dssp HHHHHHHHHHTTTT----CCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTSS-SCCCTTTBSCCEEEEEEEE--
T ss_pred HHHHHHHHHHHHhC----CCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccccC-CCCChhhhhhhheeeeeee--
Confidence 99999999998754 89999999986666665422 2456789999999998865 5443 34445544333
Q ss_pred ccchhhhhcCcHHHHHHHHHHHHHh
Q 014388 309 LCTAEELVQKPFSFAVKMVQNAIQM 333 (425)
Q Consensus 309 ~~~~~~l~~~~l~~~A~~iR~ai~~ 333 (425)
+.. .+.++.+++..+++.+.+
T Consensus 293 --p~~--~~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 293 --EIG--PNTDIVDLASDIVATLRA 313 (422)
T ss_dssp --CCC--SSCCHHHHHHHHHHHHHH
T ss_pred --ecc--CCCCHHHHHHHHHHHHHH
Confidence 211 135788888888888865
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.81 E-value=1.9e-05 Score=78.09 Aligned_cols=251 Identities=15% Similarity=0.060 Sum_probs=150.9
Q ss_pred hhHHHHHHHHHHHHhhhhccCCceeeecCCCcEEEEecCCCCCeeEEEEeecCChhhhcCCCCCCh-HHHhccc---cCC
Q 014388 46 VEARDLIKQALAKVLVHYYPLAGRLRRSSSGNLFVECNNSIKGVPFVEAVADSEIEKLGDITVPDT-VMLENLV---YDV 121 (425)
Q Consensus 46 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~~~gv~f~~~~~~~s~~~l~~~~~p~~-~~~~~l~---~~~ 121 (425)
..+.++|++++.+++..+|.|-.++.... | .+. ... ...+.+.+.. . .+.. ..+.+.+ ...
T Consensus 32 ~ld~~~L~~A~~~lv~rh~~LRt~f~~~~-~--~v~-~~~--~~~~~~~d~~-------~--~~~~~~~~~~~~~~~~~~ 96 (436)
T 1l5a_A 32 PLDTTLLLRALHLTVSEIDLFRARFSAQG-E--LYW-HPF--SPPIDYQDLS-------I--HLEAEPLAWRQIEQDLQR 96 (436)
T ss_dssp SCCHHHHHHHHHHHHHTCGGGGEEECTTC-C--EEE-CSS--CCCCEEEECT-------T--CTTHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHhheeEEEEEecC-C--eEC-CCc--CCCccEEeCC-------C--CCCHHHHHHHHHHHHhcC
Confidence 36899999999999999999999887543 4 332 222 2333222211 0 0110 0111111 011
Q ss_pred CCCCcccCCCeEEEEEeEeccCcEEEEeeeeeeecchhhHHHHHHHHHHHhc----CCCCCCCC-CCC------ccccCC
Q 014388 122 PGVENILEMPLMTAQVTRFKCGGLVFGMAINHCMVDGISAMQFVNSWAETAR----GITLTMPP-VLD------RSILMP 190 (425)
Q Consensus 122 p~~~~~~~~pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~P-~~d------r~~l~~ 190 (425)
|. +....|++.+.+....++...|.+.+||.++||.|+..|++.+.+.+. |.+...++ .+. +..+..
T Consensus 97 ~f--dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 174 (436)
T 1l5a_A 97 SS--TLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTS 174 (436)
T ss_dssp CC--CCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTS
T ss_pred CC--CcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhcc
Confidence 11 234568888888766677899999999999999999999999999987 44332111 110 000010
Q ss_pred CCCCCCCCCCCCccccc-----cCCcc--cccccccccceeEEEEEeCHHHHHHHHHHHhhcCCCccccHHHHHHHHHHH
Q 014388 191 KKPSVDKNDSETLTEVE-----ISDVS--KIETLYQEQKMICKSFKFDQNRLAGLKKKAMENGELTYCSSFTVLAAFLWR 263 (425)
Q Consensus 191 ~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~ 263 (425)
. .. .....|+. .+... +............+.+.++.+..++|++.|++.+ +|.+.++.|.+-.
T Consensus 175 ---~--~~-~~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~----~t~~~~l~aa~~~ 244 (436)
T 1l5a_A 175 ---H--RY-WQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANANQ----IGWPDALVALCAL 244 (436)
T ss_dssp ---H--HH-HHHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHTT----CCHHHHHHHHHHH
T ss_pred ---H--hH-HHHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHhC----CCHHHHHHHHHHH
Confidence 0 00 00011211 00000 0000011233457889999999999999998754 8999999887544
Q ss_pred HHHHhcCCCCCCcEEEEEEeccCCcCCCCCCCCCcccceeEeeeeccchhhhhcCcHHHHHHHHHHHHHh
Q 014388 264 ARSQALKMKPQQQTKLVFTVDIRSKLKTNPLPKGFFGNGVLVTQCLCTAEELVQKPFSFAVKMVQNAIQM 333 (425)
Q Consensus 264 ~~~~ar~~~~~~~~~l~~~vd~R~rl~~p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~iR~ai~~ 333 (425)
.+.+.. . ..+.+.+++++|..-+ -.+.+|+++......+.... +.++.+++..+++.+.+
T Consensus 245 ~L~~~~---g-~dv~ig~~~~~R~~~~----~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 245 YLESAE---P-DAPWLWLPFMNRWGSV----AANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp HHHHHS---T-TCCEEEEEECCCTTSG----GGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHH
T ss_pred HHHHhh---C-CceEEeeecccCCChH----HhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHH
Confidence 444442 4 6789999999997432 25566777666555443322 35788999999888865
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.74 E-value=3.1e-06 Score=86.00 Aligned_cols=278 Identities=15% Similarity=0.106 Sum_probs=167.0
Q ss_pred CCeeeCCcccccc-------c--c-c-eeEEEEeeCCCCCCchhHHHHHHHHHHHHhhhhccCCceeeecCCCcEEEEe-
Q 014388 15 KEPYFLSSLDHAV-------I--D-M-MKTVYIYKLDGKKSGVEARDLIKQALAKVLVHYYPLAGRLRRSSSGNLFVEC- 82 (425)
Q Consensus 15 ~~~~~Ls~lD~~~-------~--~-y-~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~- 82 (425)
...+|||+..+-+ + . | +...+-++. ..+.++|++++.+++.++|.|-.++.... |.+.-..
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g------~ld~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~ 166 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEG------KLERTRVEAAFQRLIARHESLRTSFAVVN-GEPVQNIH 166 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEE------CCCHHHHHHHHHHHHHHCGGGGEEEEEET-TEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECC------CCCHHHHHHHHHHHHHHhHhheeEEEeeC-CEEEEEEC
Confidence 4579999876432 2 1 3 344444443 36899999999999999999999997643 5443222
Q ss_pred cCCCCCeeEEEEeecCChhhhcCCCCCChHHHhccccCCCCCCcccCCCeEEEEEeEeccCcEEEEeeeeeeecchhhHH
Q 014388 83 NNSIKGVPFVEAVADSEIEKLGDITVPDTVMLENLVYDVPGVENILEMPLMTAQVTRFKCGGLVFGMAINHCMVDGISAM 162 (425)
Q Consensus 83 ~~~~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~p~~~~~~~~pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~ 162 (425)
... ...+...+. +-+++. ...+.. ..|. +....|++.+.+....++...|.+.+||.++||.|+.
T Consensus 167 ~~~--~~~~~~~~~--~~~~~~--------~~~~~~-~~~f--dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~ 231 (520)
T 2jgp_A 167 EDV--PFALAYSEV--TEEEAR--------ELVSSL-VQPF--DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSG 231 (520)
T ss_dssp SCC--CCCCEEEEC--CHHHHH--------HHHHHT-CCCC--CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHH
T ss_pred CCC--CCceEEEeC--CHHHHH--------HHHHHh-cCCC--CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHH
Confidence 222 222222221 111111 011111 0111 2345688888887666777999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCC-CC-C-----ccccCCCCCCCCCCCCCCccccc--cCC------ccc--ccccccccceeE
Q 014388 163 QFVNSWAETARGITLTMPP-VL-D-----RSILMPKKPSVDKNDSETLTEVE--ISD------VSK--IETLYQEQKMIC 225 (425)
Q Consensus 163 ~fl~~wa~~~rg~~~~~~P-~~-d-----r~~l~~~~~~~~~~~~~~~~~~~--~~~------~~~--~~~~~~~~~~~~ 225 (425)
.|++.+.+.+++.+....| .+ | +..... + ... ....|+. +.. .+. ............
T Consensus 232 ~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~---~--~~~-~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~ 305 (520)
T 2jgp_A 232 ILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQS---A--AFH-KQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQ 305 (520)
T ss_dssp HHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTS---H--HHH-HHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEE
T ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcC---h--hhH-HHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccE
Confidence 9999999999986421112 11 0 000000 0 000 0011110 000 000 000011223467
Q ss_pred EEEEeCHHHHHHHHHHHhhcCCCccccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEeccCCcCCCCCCCCCcccceeEe
Q 014388 226 KSFKFDQNRLAGLKKKAMENGELTYCSSFTVLAAFLWRARSQALKMKPQQQTKLVFTVDIRSKLKTNPLPKGFFGNGVLV 305 (425)
Q Consensus 226 ~~~~~~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~~p~lp~~y~GN~~~~ 305 (425)
+.+.++.+..++|++.|++.+ +|.+.++.|.+-..+.+.. ....+.+.+++++|..-+ + ++.+|+++..
T Consensus 306 ~~~~l~~~~~~~l~~~a~~~~----~T~~~~l~aa~a~~L~~~~---~~~dv~~g~~~~gR~~~~---~-~~~vG~f~n~ 374 (520)
T 2jgp_A 306 CTIGAGKALTEGLHQLAQATG----TTLYMVLLAAYNVLLAKYA---GQEDIIVGTPITGRSHAD---L-EPIVGMFVNT 374 (520)
T ss_dssp EEEECCHHHHHHHHHHHHHHT----CCHHHHHHHHHHHHHHHHH---TCSCEEEEEEECCCCSGG---G-TTCCSCCCEE
T ss_pred EEEeCCHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHHHHhc---CCCCeEEEeccCCCCchh---h-hccEEeeeee
Confidence 788999999999999998754 8999998887555555443 346789999999997533 2 4567777666
Q ss_pred eeeccchhhhhcCcHHHHHHHHHHHHHh
Q 014388 306 TQCLCTAEELVQKPFSFAVKMVQNAIQM 333 (425)
Q Consensus 306 ~~~~~~~~~l~~~~l~~~A~~iR~ai~~ 333 (425)
....+.... +.++.+++..|++.+.+
T Consensus 375 lplr~~~~~--~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 375 LAMRNKPQR--EKTFSEFLQEVKQNALD 400 (520)
T ss_dssp EEEEECCCT--TSBHHHHHHHHHHHHHH
T ss_pred eeEEecCCC--CCCHHHHHHHHHHHHHH
Confidence 555443322 45788888888888765
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.73 E-value=3.8e-07 Score=92.16 Aligned_cols=290 Identities=12% Similarity=0.008 Sum_probs=166.3
Q ss_pred CCCeeeCCccccccc-------c-ceeEEEEeeCCCCCCchhHHHHHHHHHHHHhhhhccCCceeeecCCCcEEEEecCC
Q 014388 14 CKEPYFLSSLDHAVI-------D-MMKTVYIYKLDGKKSGVEARDLIKQALAKVLVHYYPLAGRLRRSSSGNLFVECNNS 85 (425)
Q Consensus 14 ~~~~~~Ls~lD~~~~-------~-y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~ 85 (425)
.+..+|||+.-+-+- - .....+.|..++ ..+.++|++++.+++..+|.|-.++.... |.+. .....
T Consensus 10 ~~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g----~ld~~~L~~A~~~lv~rh~~LRt~f~~~~-~~~~-~v~~~ 83 (493)
T 4hvm_A 10 RPGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSG----RIDDDRLAAAADEVLDAFPLLRVNFVDDD-GLWM-RTREN 83 (493)
T ss_dssp --CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEES----SCCHHHHHHHHHHHHHHCGGGGEEEEESS-SEEE-EECSC
T ss_pred CCCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeC----CCCHHHHHHHHHHHHHhchhceeEEEccC-CEEE-EecCC
Confidence 357899998875321 1 123344555543 46899999999999999999999998744 6555 44444
Q ss_pred CCCeeEEEEeecC-Ch--hhhcCCCCCChHHHhccccCCCCCCcccCCCeEEEEEeEeccCcEEEEeeeeeeecchhhHH
Q 014388 86 IKGVPFVEAVADS-EI--EKLGDITVPDTVMLENLVYDVPGVENILEMPLMTAQVTRFKCGGLVFGMAINHCMVDGISAM 162 (425)
Q Consensus 86 ~~gv~f~~~~~~~-s~--~~l~~~~~p~~~~~~~l~~~~p~~~~~~~~pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~ 162 (425)
.+.+.+.+... +- +++.+ .+.... ..|. +....|++.+.+....++...|.+.+||.++||.|+.
T Consensus 84 --~~~~~~~d~~~~~~~~~~~~~-------~~~~~~-~~~f--dl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~ 151 (493)
T 4hvm_A 84 --ADALVRSDLRGHPDPQARCVE-------LLRADR-DRPT--DPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRY 151 (493)
T ss_dssp --CCCEEEEECTTSSSHHHHHHH-------HHHHHH-SSCC--CTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHH
T ss_pred --CCCceEEECCCCCchHHHHHH-------HHHHHh-cCCC--CCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHH
Confidence 23443332210 00 11100 111111 1111 2345689999887777777899999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCccccCC-CC--CCCCCCC-CCCccccc--cCCccc-ccccccccceeEEEEEeCHHHH
Q 014388 163 QFVNSWAETARGITLTMPPVLDRSILMP-KK--PSVDKND-SETLTEVE--ISDVSK-IETLYQEQKMICKSFKFDQNRL 235 (425)
Q Consensus 163 ~fl~~wa~~~rg~~~~~~P~~dr~~l~~-~~--~~~~~~~-~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~i 235 (425)
.+++.+.+.+.|.++. .+..| ...- .. ... ... ....+|+. +..... .....+......+.+.++.+..
T Consensus 152 ~l~~~l~~~Y~g~~~~-~~~~~--~~~~~~~~~~~~-~~~~~~~~~~W~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~ 227 (493)
T 4hvm_A 152 MVLGAVWQAYYGRFRP-AQYRD--FAEVADFHPLDR-ETVRVARHRWWSRRLPALPVRGGDGGPVGPPETSRLRVPGSRW 227 (493)
T ss_dssp HHHHHHHHHHTTCCCG-GGSBC--GGGTTTCCTTCS-HHHHHHHHHHHHHHGGGSCCCC-------CCEEEEEEEEHHHH
T ss_pred HHHHHHHHHhCCCCCC-cCHHH--HHHHHhhhhccc-ChhhHHHHHHHHHhccCCCCCCCCCCCCCCCeeEEEEcCHHHH
Confidence 9999999999876532 22111 1110 00 000 000 00112221 000000 0000111226778899999999
Q ss_pred HHHHHHHhhcCCCcccc--HHHHHHHHHHHHHHHhcCC--------CCCCcEEEEEEeccCCcCCCCCCCCCcccceeEe
Q 014388 236 AGLKKKAMENGELTYCS--SFTVLAAFLWRARSQALKM--------KPQQQTKLVFTVDIRSKLKTNPLPKGFFGNGVLV 305 (425)
Q Consensus 236 ~~Lk~~~~~~~~~~~~S--~~d~l~A~lW~~~~~ar~~--------~~~~~~~l~~~vd~R~rl~~p~lp~~y~GN~~~~ 305 (425)
++|++.|++.+ +| .+.++.|.+-..+.+.+.. .....+.+.+++++|..-+ -.+.+|+++..
T Consensus 228 ~~l~~~a~~~~----vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~~----~~~~vG~f~n~ 299 (493)
T 4hvm_A 228 QALTEPGGPLG----GNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHLQ----LGSVVGPLTDR 299 (493)
T ss_dssp HHHHCC----------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHTT----CCSBCSCCEEE
T ss_pred HHHHHHHHHcC----CCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCcc----hhcCeEeeece
Confidence 99998887654 78 9999988755554444100 2456789999999996533 35677888776
Q ss_pred eeeccchhhhhcCcHHHHHHHHHHHHHh
Q 014388 306 TQCLCTAEELVQKPFSFAVKMVQNAIQM 333 (425)
Q Consensus 306 ~~~~~~~~~l~~~~l~~~A~~iR~ai~~ 333 (425)
....+..+...+.++.+++..+++.+.+
T Consensus 300 lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 300 VVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp EEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 6655544432246788888888888765
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.63 E-value=7.9e-06 Score=81.55 Aligned_cols=295 Identities=14% Similarity=0.070 Sum_probs=168.3
Q ss_pred CCCeeeCCcccccc-----c-c-ceeEEEEeeCCCCCCchhHHHHHHHHHHHHhhhhccCCceeeecCCCcEE-EEecCC
Q 014388 14 CKEPYFLSSLDHAV-----I-D-MMKTVYIYKLDGKKSGVEARDLIKQALAKVLVHYYPLAGRLRRSSSGNLF-VECNNS 85 (425)
Q Consensus 14 ~~~~~~Ls~lD~~~-----~-~-y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~-i~~~~~ 85 (425)
....+|||+..+++ + . .....+.|..++ ..+.+.|+++|.+++..+|.|-.++.... |.+. +.....
T Consensus 14 ~~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g----~ld~~~L~~Al~~lv~rh~~LRt~f~~~~-~~~~q~v~~~~ 88 (466)
T 2xhg_A 14 IAGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPE----GFDPKVIQSVMDKIIEHHDALRMVYQHEN-GNVVQHNRGLG 88 (466)
T ss_dssp CCEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETT----CCCHHHHHHHHHHHHHHSGGGGEEEECGG-GCCEEEECCSS
T ss_pred cCCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCC----CCCHHHHHHHHHHHHHhChHhheEEecCC-Cceeeeccccc
Confidence 34688999877632 1 1 223444555543 46899999999999999999999998643 4432 222211
Q ss_pred CCCeeEEEEeecC--ChhhhcCCCCCChHHHhccccCCCCCCcccCCCeEEEEEeEeccCcEEEEeeeeeeecchhhHHH
Q 014388 86 IKGVPFVEAVADS--EIEKLGDITVPDTVMLENLVYDVPGVENILEMPLMTAQVTRFKCGGLVFGMAINHCMVDGISAMQ 163 (425)
Q Consensus 86 ~~gv~f~~~~~~~--s~~~l~~~~~p~~~~~~~l~~~~p~~~~~~~~pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~ 163 (425)
...+.+.+.+... ..++.. ..+.... ..+. +....|++.+.+....++.. |-+.+||.++||.|+..
T Consensus 89 ~~~~~~~~~d~~~~~~~~~~~-------~~~~~~~-~~~f--dl~~~pl~r~~l~~~~~~~~-l~l~~HH~i~Dg~S~~~ 157 (466)
T 2xhg_A 89 GQLYDFFSYNLTAQPDVQQAI-------EAETQRL-HSSM--NLQEGPLVKVALFQTLHGDH-LFLAIHHLVVDGISWRI 157 (466)
T ss_dssp SCCCEEEEEECTTCSCHHHHH-------HHHHHHH-HTTC--CTTTCCCEEEEEEEETTEEE-EEEEEEGGGCCHHHHHH
T ss_pred cccceeEEEecCCcccHHHHH-------HHHHHHH-Hhcc--CCCCCCeEEEEEEEcCCCCE-EEEEeeeeeechhhHHH
Confidence 0133443332210 111100 0111111 0111 23456899888877666544 67999999999999999
Q ss_pred HHHHHHHHhc----CCCCCCCCC--CCccccC---C-CCCCCCCCCCCCccccc-----cC--Cccc--cccccccccee
Q 014388 164 FVNSWAETAR----GITLTMPPV--LDRSILM---P-KKPSVDKNDSETLTEVE-----IS--DVSK--IETLYQEQKMI 224 (425)
Q Consensus 164 fl~~wa~~~r----g~~~~~~P~--~dr~~l~---~-~~~~~~~~~~~~~~~~~-----~~--~~~~--~~~~~~~~~~~ 224 (425)
|++.+.+.++ |.++..+|. --++... . ...+ .. .....|+. .+ ..+. ...........
T Consensus 158 l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~--~~-~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~ 234 (466)
T 2xhg_A 158 LFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEA--DL-LSEIPYWESLESQAKNVSLPKDYEVTDCKQKSVR 234 (466)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSH--HH-HTTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEE
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCc--cc-hhhhHHHHHhhccCCcccCCccccccccccccce
Confidence 9999999886 333222221 0000000 0 0000 00 00111210 00 0000 00001123456
Q ss_pred EEEEEeCHHHHHHHHHHHhhcCCCccccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEeccCCcCCCCCCCCCcccceeE
Q 014388 225 CKSFKFDQNRLAGLKKKAMENGELTYCSSFTVLAAFLWRARSQALKMKPQQQTKLVFTVDIRSKLKTNPLPKGFFGNGVL 304 (425)
Q Consensus 225 ~~~~~~~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~~p~lp~~y~GN~~~ 304 (425)
...+.++++..++|++.|.+.. .+|.++++.|.+-..+.+.. ....+.+.+++++|......+--.+.+|+++.
T Consensus 235 ~~~~~l~~~~~~~l~~~~~~~~---~~t~~~~llaa~~~~l~~~~---~~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n 308 (466)
T 2xhg_A 235 NMRIRLHPEETEQLLKHANQAY---QTEINDLLLAALGLAFAEWS---KLAQIVIHLEGHGREDIIEQANVARTVGWFTS 308 (466)
T ss_dssp EEEEECCHHHHHHHHHTGGGTT---TCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEECCCCSCSTTCCCTTCCSCCCE
T ss_pred EEEEEcCHHHHHHHHHHhHHhh---CCCHHHHHHHHHHHHHHHHh---CCCceEEEecCCCCCccccCCCccccccceee
Confidence 7889999999999998875432 37999999887655555543 34668999999999764200112456777766
Q ss_pred eeeeccchhhhhcCcHHHHHHHHHHHHHhcc
Q 014388 305 VTQCLCTAEELVQKPFSFAVKMVQNAIQMVN 335 (425)
Q Consensus 305 ~~~~~~~~~~l~~~~l~~~A~~iR~ai~~~~ 335 (425)
.....+.... +.++.+++..|++.+..+.
T Consensus 309 ~lplr~~~~~--~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 309 QYPVLLDLKQ--TAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp EEEEEEECSC--CCSHHHHHHHHHHHHHHSG
T ss_pred eccEEEecCC--CCCHHHHHHHHHHHHHhCc
Confidence 6554443322 3579999999999987763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.30 E-value=0.00015 Score=81.83 Aligned_cols=288 Identities=11% Similarity=0.030 Sum_probs=165.9
Q ss_pred CeeeCCcccc-------ccc---cceeEEEEeeCCCCCCchhHHHHHHHHHHHHhhhhccCCceeeecCCCc-EEEEecC
Q 014388 16 EPYFLSSLDH-------AVI---DMMKTVYIYKLDGKKSGVEARDLIKQALAKVLVHYYPLAGRLRRSSSGN-LFVECNN 84 (425)
Q Consensus 16 ~~~~Ls~lD~-------~~~---~y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~-~~i~~~~ 84 (425)
+.+|||+.-+ ..+ .|. ..+.|+.++ ..+.++|++++.+++..++.|--++.....|. ..+....
T Consensus 11 d~~PLS~~Q~~lw~~~~~~~~~~~Y~-~~~~~~l~g----~ld~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~ 85 (1304)
T 2vsq_A 11 DMYYLSPMQEGMLFHAILNPGQSFYL-EQITMKVKG----SLNIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKK 85 (1304)
T ss_dssp EEEECCHHHHHHHHHHHHSTTSCTTE-EEEEEEEEE----CCCHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESC
T ss_pred CcCCCCHHHHHHHHHHhhCCCCCceE-EEEEEEEcC----CcCHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCC
Confidence 5788887543 222 132 233344432 47899999999999999999999987654443 3333333
Q ss_pred CCCCeeEEEEeec-CChhhhcCCCCCChHHHhcccc---CCCCCCcccCCCeEEEEEeEeccCcEEEEeeeeeeecchhh
Q 014388 85 SIKGVPFVEAVAD-SEIEKLGDITVPDTVMLENLVY---DVPGVENILEMPLMTAQVTRFKCGGLVFGMAINHCMVDGIS 160 (425)
Q Consensus 85 ~~~gv~f~~~~~~-~s~~~l~~~~~p~~~~~~~l~~---~~p~~~~~~~~pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~ 160 (425)
. ...+.+.+.. .+-.+- ...+..++- ..|. +....|++.+.+....++...+.+.+||.++||.|
T Consensus 86 ~--~~~~~~~d~~~~~~~~~-------~~~~~~~~~~~~~~~f--dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S 154 (1304)
T 2vsq_A 86 R--QFHIEEIDLTHLTGSEQ-------TAKINEYKEQDKIRGF--DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWC 154 (1304)
T ss_dssp C--CCCEEEEECTTSCHHHH-------HHHHHHHHHHHHHHCC--CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHH
T ss_pred C--CCceEEEECCCCCchhH-------HHHHHHHHHHHhcCCC--CCCCCCcEEEEEEEECCCcEEEEEecCceeechhh
Confidence 3 3344332211 000000 001111110 0111 23456899999887777789999999999999999
Q ss_pred HHHHHHHHHHHhcC----CCCCCCCC-CCccccCCCCCCCCCCCCCCccccc--cCC------ccccc-ccccccceeEE
Q 014388 161 AMQFVNSWAETARG----ITLTMPPV-LDRSILMPKKPSVDKNDSETLTEVE--ISD------VSKIE-TLYQEQKMICK 226 (425)
Q Consensus 161 ~~~fl~~wa~~~rg----~~~~~~P~-~dr~~l~~~~~~~~~~~~~~~~~~~--~~~------~~~~~-~~~~~~~~~~~ 226 (425)
+..+++.+.+.+++ .+...+|. .-++...-.... .. ....+|+. +.. .+... ..........+
T Consensus 155 ~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~--~~-~~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~ 231 (1304)
T 2vsq_A 155 FGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQ--DK-QASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKEL 231 (1304)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTS--CH-HHHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcc--hh-hHHHHHHHHHhCCCCccccCCCCCCccccccCcceE
Confidence 99999999998864 33222221 001100000000 00 00111211 000 00000 00012234567
Q ss_pred EEEeCHHHHHHHHHHHhhcCCCccccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEeccCCcCCCCCCCCCcccceeEee
Q 014388 227 SFKFDQNRLAGLKKKAMENGELTYCSSFTVLAAFLWRARSQALKMKPQQQTKLVFTVDIRSKLKTNPLPKGFFGNGVLVT 306 (425)
Q Consensus 227 ~~~~~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~~p~lp~~y~GN~~~~~ 306 (425)
.+.++++..++||+.|++.+ +|.+.++.|.+-..+.|-. ....+.+..++++|.... +.+ ++.+|+.+...
T Consensus 232 ~~~l~~~~~~~L~~~a~~~~----~T~~~vllaa~a~~L~r~t---g~~dvv~G~pvsgR~~~~-~~~-~~~vG~fvntl 302 (1304)
T 2vsq_A 232 LFSPSEAETKAFTELAKSQH----TTLSTALQAVWSVLISRYQ---QSGDLAFGTVVSGRPAEI-KGV-EHMVGLFINVV 302 (1304)
T ss_dssp EECCCHHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHHHH---TCSEEEEEEEECCCCTTS-TTG-GGCCSSCCEEE
T ss_pred EEecCHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHHHHhc---CCCCEEEEEEeCCCCccc-hhh-hcccccceeEE
Confidence 78899999999999998765 7999998886544444443 356789999999997532 222 45667766555
Q ss_pred eeccchhhhhcCcHHHHHHHHHHHHHh
Q 014388 307 QCLCTAEELVQKPFSFAVKMVQNAIQM 333 (425)
Q Consensus 307 ~~~~~~~~l~~~~l~~~A~~iR~ai~~ 333 (425)
...+..+. +.++.++...+++...+
T Consensus 303 plr~~~~~--~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 303 PRRVKLSE--GITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp EEEEECCT--TCBHHHHHHHHHHHHHH
T ss_pred EEEecCCC--CCcHHHHHHHHHHHHHH
Confidence 54443322 46799999999988765
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.25 E-value=0.00021 Score=72.19 Aligned_cols=362 Identities=11% Similarity=0.029 Sum_probs=179.5
Q ss_pred chhHHHHHHHHHHHHhhhhccCCceeeecCCCcEEEEe--c-CC-----CCCeeEEEEeecCChhhhc----------CC
Q 014388 45 GVEARDLIKQALAKVLVHYYPLAGRLRRSSSGNLFVEC--N-NS-----IKGVPFVEAVADSEIEKLG----------DI 106 (425)
Q Consensus 45 ~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~--~-~~-----~~gv~f~~~~~~~s~~~l~----------~~ 106 (425)
.....++|+.|+-++=-++|.+|+++..+..+.+...+ . ++ +-.--|.+.+.+.+-+|+. ..
T Consensus 71 ~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~ 150 (519)
T 3fot_A 71 LQNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAAND 150 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhccccc
Confidence 35667788888888888999999999876433333323 1 11 0011244444344444441 00
Q ss_pred CCCChHHHhccccCCCCCCcccCCCeEEEEEeEeccC--cEEEEeeeeeeecchhhHHHHHHHHHHHhcCCC----CCCC
Q 014388 107 TVPDTVMLENLVYDVPGVENILEMPLMTAQVTRFKCG--GLVFGMAINHCMVDGISAMQFVNSWAETARGIT----LTMP 180 (425)
Q Consensus 107 ~~p~~~~~~~l~~~~p~~~~~~~~pll~vqvt~f~~G--G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~----~~~~ 180 (425)
..|.. .-.+..-.+.. ..+.| + .+ -.-|.+.+||.++||.|...|++.+-+...... ....
T Consensus 151 ~~p~~--~~~l~~v~~~~--~~~~~--------~-p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~ 217 (519)
T 3fot_A 151 NTPSK--SIELFLLSDVS--TDSTP--------I-PQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREM 217 (519)
T ss_dssp CCCCC--SCEEEEEESSS--STTSC--------C-CTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGS
T ss_pred CCCcc--ceEEEEEeccc--ccccc--------C-CCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCC
Confidence 01110 00110000000 00001 1 11 366888899999999999999999998886321 1112
Q ss_pred CCCC-ccccCCCCCCCCCCC-CC----Cccccc-c--------CC--cccccccccccceeEEEEEeCHHHHHHHHHHHh
Q 014388 181 PVLD-RSILMPKKPSVDKND-SE----TLTEVE-I--------SD--VSKIETLYQEQKMICKSFKFDQNRLAGLKKKAM 243 (425)
Q Consensus 181 P~~d-r~~l~~~~~~~~~~~-~~----~~~~~~-~--------~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~Lk~~~~ 243 (425)
|.++ .+-...-.|+.+..- .+ .++... . .. .+.......+.......+.|++++.++|++.|+
T Consensus 218 ~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck 297 (519)
T 3fot_A 218 KKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVK 297 (519)
T ss_dssp CCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHH
T ss_pred CcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHH
Confidence 3222 100000011100000 00 001000 0 00 000000001123456788999999999999999
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHhcC---CCCCCcEEEEEEeccCCcCCCCCCCCCcccceeEeeeeccch--------
Q 014388 244 ENGELTYCSSFTVLAAFLWRARSQALK---MKPQQQTKLVFTVDIRSKLKTNPLPKGFFGNGVLVTQCLCTA-------- 312 (425)
Q Consensus 244 ~~~~~~~~S~~d~l~A~lW~~~~~ar~---~~~~~~~~l~~~vd~R~rl~~p~lp~~y~GN~~~~~~~~~~~-------- 312 (425)
+..+ +.+|.+.++.|.+-.++.+... ........+.++||+|+++. ++.-.+|+|.+.......+..
T Consensus 298 ~~~~-~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~-~~~~~n~~~~~~~~~~~~v~~i~~~~~~~ 375 (519)
T 3fot_A 298 TRLG-PGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLR-EDIASNFYAMCQTAAVVRIENLKSITVSH 375 (519)
T ss_dssp HHTC-TTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBC-HHHHTSCCSCCEEEEEEEECCGGGGCCCT
T ss_pred hcCC-CCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCC-CcccccccceeeeeeeeEecCcccccccc
Confidence 8721 2489999998877666655422 11234578899999999998 555567888876655443211
Q ss_pred --hhhhcC-cHHHHHHHHHHHHHh-cchhHHHHH--------HHhhhcCCCCCCCCCeEEEEccCCCC--ccccccC---
Q 014388 313 --EELVQK-PFSFAVKMVQNAIQM-VNEDYIKGF--------IESFDVNARPPSWTATLVITSWTRIA--FNAADFG--- 375 (425)
Q Consensus 313 --~~l~~~-~l~~~A~~iR~ai~~-~~~~~~~~~--------~~~~~~~~~p~~~~~~~~~ssw~~~~--~~~~DFG--- 375 (425)
+++..+ .+.++|..+++.... .+..+++.+ +.++.....+.....+..+||.-.+. + .-.+|
T Consensus 376 ~~~e~~~~~~~~~~ar~l~~~y~~~~~np~i~~l~~~~k~~~~~l~~~~~~~~~~~~tp~lSslG~vd~~l-p~~y~~~~ 454 (519)
T 3fot_A 376 KDEKELQVRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEGEANPLFISDGINERFI-PHEIKQTA 454 (519)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCSBCCCEEEEEEEGGGTS-CSEEEETT
T ss_pred chhhhhhHhHHHHHHHHHHHHhhcccCCchHHHhHHHHHHHHHHHhcccCCCCCCccCcccccCCcccccc-chhhcccc
Confidence 121111 157777778776655 333333322 22222221111113456778876665 3 22344
Q ss_pred CCcc-ceeeecc-----cCCceEEEecCCCCCCcEEEEEe-----CCHHHHHHHHHHHhh
Q 014388 376 WGEP-TQFGSTR-----IPKEVGLFIPEGKDKNGIVLVLG-----LPVSAMNTFQELITS 424 (425)
Q Consensus 376 ~G~P-~~~~~~~-----~~~~~~~ilp~~~~~gg~~v~v~-----L~~~~m~~l~~~~~~ 424 (425)
.|.. ..+.... ....+.+.+-.. +|-+.+.++ .+++.|+.|.+.+.+
T Consensus 455 ~~~~~~~V~~~~~~~~~~~~~~~~~~~Tf--~g~L~l~~~yn~a~~~~e~v~~~l~~v~~ 512 (519)
T 3fot_A 455 TGENVLSVESIDFVVNQSLPYLAIRLDSW--RDASTLNIIYNDANYTEAEVQKYLQSIVE 512 (519)
T ss_dssp TTEEEEEEEEEEEEECCCSSSCEEEEEEE--TTEEEEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEEEEccccCCceEEEEEEE--CCEEEEEEEeccccCCHHHHHHHHHHHHH
Confidence 2322 1121111 111111111111 334444443 678899998887654
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=71.56 E-value=2.6 Score=36.87 Aligned_cols=45 Identities=20% Similarity=0.378 Sum_probs=33.6
Q ss_pred CCCeEEEEEeEeccCc--EEEEeeeeeeecchhhHHHHHHHHHHHhc
Q 014388 129 EMPLMTAQVTRFKCGG--LVFGMAINHCMVDGISAMQFVNSWAETAR 173 (425)
Q Consensus 129 ~~pll~vqvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 173 (425)
..|++.+--..=.+|. +-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 3577765322112333 78999999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=70.70 E-value=2.8 Score=36.80 Aligned_cols=44 Identities=23% Similarity=0.375 Sum_probs=32.1
Q ss_pred CCCeEEEEEeEeccCc--EEEEeeeeeeecchhhHHHHHHHHHHHh
Q 014388 129 EMPLMTAQVTRFKCGG--LVFGMAINHCMVDGISAMQFVNSWAETA 172 (425)
Q Consensus 129 ~~pll~vqvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 172 (425)
..|++.+=-..=.+|. +-|++++||.+.||.-+..|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 3577754221112332 6899999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=69.93 E-value=2.9 Score=36.69 Aligned_cols=44 Identities=14% Similarity=0.281 Sum_probs=33.3
Q ss_pred CCeEEEEEeEeccCc--EEEEeeeeeeecchhhHHHHHHHHHHHhc
Q 014388 130 MPLMTAQVTRFKCGG--LVFGMAINHCMVDGISAMQFVNSWAETAR 173 (425)
Q Consensus 130 ~pll~vqvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 173 (425)
.|.+.+--..-.+|. +-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577765432222332 78999999999999999999999988764
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=66.81 E-value=3.8 Score=36.52 Aligned_cols=29 Identities=17% Similarity=0.385 Sum_probs=27.1
Q ss_pred EEEEeeeeeeecchhhHHHHHHHHHHHhc
Q 014388 145 LVFGMAINHCMVDGISAMQFVNSWAETAR 173 (425)
Q Consensus 145 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 173 (425)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998774
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=65.44 E-value=4.1 Score=36.15 Aligned_cols=30 Identities=17% Similarity=0.419 Sum_probs=27.3
Q ss_pred EEEEeeeeeeecchhhHHHHHHHHHHHhcC
Q 014388 145 LVFGMAINHCMVDGISAMQFVNSWAETARG 174 (425)
Q Consensus 145 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 174 (425)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999988753
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=65.05 E-value=4.1 Score=36.34 Aligned_cols=29 Identities=14% Similarity=0.352 Sum_probs=26.9
Q ss_pred EEEEeeeeeeecchhhHHHHHHHHHHHhc
Q 014388 145 LVFGMAINHCMVDGISAMQFVNSWAETAR 173 (425)
Q Consensus 145 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 173 (425)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998774
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=64.97 E-value=3.6 Score=36.27 Aligned_cols=30 Identities=17% Similarity=0.443 Sum_probs=27.5
Q ss_pred EEEEeeeeeeecchhhHHHHHHHHHHHhcC
Q 014388 145 LVFGMAINHCMVDGISAMQFVNSWAETARG 174 (425)
Q Consensus 145 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 174 (425)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 558999999999999999999999998854
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=63.32 E-value=4.6 Score=36.47 Aligned_cols=29 Identities=21% Similarity=0.497 Sum_probs=26.7
Q ss_pred EEEEeeeeeeecchhhHHHHHHHHHHHhc
Q 014388 145 LVFGMAINHCMVDGISAMQFVNSWAETAR 173 (425)
Q Consensus 145 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 173 (425)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998774
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=58.49 E-value=6.4 Score=35.41 Aligned_cols=30 Identities=20% Similarity=0.429 Sum_probs=27.6
Q ss_pred EEEEeeeeeeecchhhHHHHHHHHHHHhcC
Q 014388 145 LVFGMAINHCMVDGISAMQFVNSWAETARG 174 (425)
Q Consensus 145 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 174 (425)
+-|+++++|-+.||.-+..|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999999864
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=57.39 E-value=6.9 Score=35.06 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=27.5
Q ss_pred EEEEeeeeeeecchhhHHHHHHHHHHHhcC
Q 014388 145 LVFGMAINHCMVDGISAMQFVNSWAETARG 174 (425)
Q Consensus 145 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 174 (425)
+-|+++++|-+.||.-+..|++.+.+.+..
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999998864
No 23
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=53.14 E-value=11 Score=19.79 Aligned_cols=19 Identities=32% Similarity=0.494 Sum_probs=15.7
Q ss_pred ccccHHHHHHHHHHHHHHH
Q 014388 249 TYCSSFTVLAAFLWRARSQ 267 (425)
Q Consensus 249 ~~~S~~d~l~A~lW~~~~~ 267 (425)
.-.+..|-++-++|+++..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 3468899999999998864
No 24
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=40.88 E-value=80 Score=21.32 Aligned_cols=37 Identities=14% Similarity=0.251 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHHhhhhccCCceeeecCC-CcEEEEec
Q 014388 47 EARDLIKQALAKVLVHYYPLAGRLRRSSS-GNLFVECN 83 (425)
Q Consensus 47 ~~~~~L~~sL~~~L~~~p~LaGrl~~~~~-g~~~i~~~ 83 (425)
.+.+.++++|..++.+-..+||.+...-+ +.++|+++
T Consensus 10 ddleafekalkemirqarkfagtvtytldgndleirit 47 (85)
T 2kl8_A 10 DDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp SSHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEe
Confidence 47889999999999999999999976533 45777775
No 25
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=38.93 E-value=45 Score=23.81 Aligned_cols=35 Identities=17% Similarity=0.060 Sum_probs=28.8
Q ss_pred eeEEEEEeCHHHHHHHHHHHhhcCCCccccHHHHHHHHH
Q 014388 223 MICKSFKFDQNRLAGLKKKAMENGELTYCSSFTVLAAFL 261 (425)
Q Consensus 223 ~~~~~~~~~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~l 261 (425)
+....|.+|.++=.+||..|...+ +|.++.+.-++
T Consensus 1 MSrLTIrLpd~qH~rLKalAa~qG----~SInqli~E~l 35 (83)
T 2an7_A 1 MSRLTIDMTDQQHQSLKALAALQG----KTIKQYALERL 35 (83)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHT----SCHHHHHHHHT
T ss_pred CceeeEeCCHHHHHHHHHHHHHcC----CcHHHHHHHHc
Confidence 356789999999999999998766 68888877764
No 26
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=38.86 E-value=48 Score=25.45 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=34.7
Q ss_pred eEEEEeeCCCCCCchhHHHHHHHHHHHHhhhhccCCceeeecCC-CcEEEEec
Q 014388 32 KTVYIYKLDGKKSGVEARDLIKQALAKVLVHYYPLAGRLRRSSS-GNLFVECN 83 (425)
Q Consensus 32 ~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~-g~~~i~~~ 83 (425)
-+...|+. ++.+.|+++|...+.+-..+||.+...-+ +++.|.++
T Consensus 84 vm~i~f~g-------ddlea~ekalkemirqarkfagtvtytl~gn~l~i~it 129 (170)
T 4hhu_A 84 VMVIVFEG-------DDLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 129 (170)
T ss_dssp EEEEEEEC-------SCHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEE
T ss_pred EEEEEEec-------CcHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 34566665 47889999999999999999999976533 45677765
No 27
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=38.57 E-value=49 Score=25.41 Aligned_cols=43 Identities=16% Similarity=0.301 Sum_probs=33.4
Q ss_pred EEEeeCCCCCCchhHHHHHHHHHHHHhhhhccCCceeeecCC-CcEEEEec
Q 014388 34 VYIYKLDGKKSGVEARDLIKQALAKVLVHYYPLAGRLRRSSS-GNLFVECN 83 (425)
Q Consensus 34 ~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~-g~~~i~~~ 83 (425)
...|+. ++.+.|+++|...+.+-..+||.+...-+ +++.|.++
T Consensus 5 ~i~f~g-------ddlea~ekalkemirqarkfagtvtytl~gn~l~i~it 48 (170)
T 4hhu_A 5 VIVFEG-------DDLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 48 (170)
T ss_dssp EEEEEC-------SCHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEE
T ss_pred EEEEec-------CcHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 456665 37889999999999999999999976433 45677665
No 28
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=37.47 E-value=7 Score=38.03 Aligned_cols=29 Identities=24% Similarity=0.441 Sum_probs=0.0
Q ss_pred EEEEeeeeeeecchhhHHHHHHHHHHHhc
Q 014388 145 LVFGMAINHCMVDGISAMQFVNSWAETAR 173 (425)
Q Consensus 145 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 173 (425)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 45999999999999999999999998775
No 29
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=37.06 E-value=1e+02 Score=21.33 Aligned_cols=48 Identities=10% Similarity=-0.073 Sum_probs=39.5
Q ss_pred ccceeEEEEEeCHHHHHHHHHHHhhcCCCccccHHHHHHHHHHHHHHHhcCC
Q 014388 220 EQKMICKSFKFDQNRLAGLKKKAMENGELTYCSSFTVLAAFLWRARSQALKM 271 (425)
Q Consensus 220 ~~~~~~~~~~~~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~ 271 (425)
........+.+|.+.-++|+..|..++ .|.|.-|...|-+.+.+-..+
T Consensus 16 sr~~~kf~LRlP~eL~~~L~~~A~~~g----rSlNaeIv~~Le~sl~~e~~l 63 (69)
T 3qoq_A 16 SRTADKFVVRLPEGMREQIAEVARSHH----RSMNSEIIARLEQSLLQEGAL 63 (69)
T ss_dssp TTTSEEEEEECCTTHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHHHTC-
T ss_pred cccCCceEEECCHHHHHHHHHHHHHhC----CCHHHHHHHHHHHHHHHcCCc
Confidence 345667899999999999999998876 799999999998888765544
No 30
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=35.17 E-value=73 Score=22.53 Aligned_cols=42 Identities=17% Similarity=0.184 Sum_probs=34.7
Q ss_pred ccceeEEEEEeCHHHHHHHHHHHhhcCCCccccHHHHHHHHHHHHH
Q 014388 220 EQKMICKSFKFDQNRLAGLKKKAMENGELTYCSSFTVLAAFLWRAR 265 (425)
Q Consensus 220 ~~~~~~~~~~~~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~ 265 (425)
+.......|.|+++.-.+||..|...+ +|..|+|..++=..+
T Consensus 31 ~~~~~Rlti~i~~~lh~rlK~~Aa~~g----~Smsdvvreli~~~L 72 (76)
T 1p94_A 31 SGKIKRVNVNFDEEKHTRFKAACARKG----TSITDVVNQLVDNWL 72 (76)
T ss_dssp TTCEEECCEEEEHHHHHHHHHHHHHHT----CCHHHHHHHHHHHHH
T ss_pred ccCceeEEEEcCHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHH
Confidence 456777899999999999999998765 799999988774443
No 31
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=34.75 E-value=88 Score=19.88 Aligned_cols=23 Identities=26% Similarity=0.276 Sum_probs=20.1
Q ss_pred eEEEEEeCHHHHHHHHHHHhhcC
Q 014388 224 ICKSFKFDQNRLAGLKKKAMENG 246 (425)
Q Consensus 224 ~~~~~~~~~~~i~~Lk~~~~~~~ 246 (425)
....|+||+++.+.|++.|.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~ 24 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE 24 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT
T ss_pred ceEEEEecHHHHHHHHHHHHHHH
Confidence 35789999999999999998765
Done!