Query 014389
Match_columns 425
No_of_seqs 211 out of 1187
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 04:39:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014389.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014389hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 4.7E-34 1E-38 278.5 9.9 131 294-424 80-212 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 3E-31 6.5E-36 240.5 14.2 122 303-424 1-123 (162)
3 PF03031 NIF: NLI interacting 100.0 1.7E-28 3.6E-33 218.2 12.5 117 304-424 1-117 (159)
4 TIGR02250 FCP1_euk FCP1-like p 100.0 3.8E-28 8.3E-33 220.1 10.7 123 300-425 3-139 (156)
5 TIGR02245 HAD_IIID1 HAD-superf 99.9 2E-23 4.3E-28 196.4 11.2 109 300-424 18-140 (195)
6 smart00577 CPDc catalytic doma 99.9 8.7E-22 1.9E-26 175.2 13.5 123 302-424 1-126 (148)
7 KOG2832 TFIIF-interacting CTD 99.8 1.4E-21 3.1E-26 196.8 8.4 110 298-423 184-293 (393)
8 KOG0323 TFIIF-interacting CTD 99.8 3.3E-21 7.1E-26 206.5 7.3 123 300-425 143-282 (635)
9 COG5190 FCP1 TFIIF-interacting 99.8 5.3E-21 1.2E-25 195.6 7.2 126 298-424 207-332 (390)
10 COG5190 FCP1 TFIIF-interacting 98.5 4.9E-08 1.1E-12 100.9 3.2 124 300-425 23-157 (390)
11 TIGR01681 HAD-SF-IIIC HAD-supe 98.4 1.3E-07 2.9E-12 82.6 1.8 109 304-424 1-119 (128)
12 TIGR01685 MDP-1 magnesium-depe 98.2 2.4E-06 5.2E-11 79.5 5.8 119 304-424 3-141 (174)
13 cd01427 HAD_like Haloacid deha 98.2 9.5E-07 2.1E-11 72.7 2.8 103 305-423 1-123 (139)
14 PRK13288 pyrophosphatase PpaX; 98.0 1.6E-06 3.5E-11 80.4 1.6 82 341-423 80-165 (214)
15 TIGR01684 viral_ppase viral ph 98.0 1.4E-05 3.1E-10 80.4 7.9 72 300-393 123-196 (301)
16 PHA03398 viral phosphatase sup 98.0 2E-05 4.3E-10 79.4 7.8 73 300-394 125-199 (303)
17 TIGR01662 HAD-SF-IIIA HAD-supe 97.9 1.1E-05 2.4E-10 69.4 4.8 100 305-422 2-112 (132)
18 PRK14988 GMP/IMP nucleotidase; 97.9 3.4E-06 7.4E-11 80.0 1.3 81 342-423 92-176 (224)
19 COG4996 Predicted phosphatase 97.9 2.5E-05 5.4E-10 70.9 5.8 113 305-423 2-126 (164)
20 TIGR01686 FkbH FkbH-like domai 97.8 2.2E-05 4.8E-10 78.5 4.3 106 302-423 2-113 (320)
21 PF12689 Acid_PPase: Acid Phos 97.7 4.1E-05 8.9E-10 71.3 5.2 110 303-422 3-133 (169)
22 COG0637 Predicted phosphatase/ 97.7 5.6E-06 1.2E-10 78.7 -0.7 82 342-424 85-170 (221)
23 PRK13225 phosphoglycolate phos 97.7 4.6E-06 1E-10 82.1 -1.4 81 342-423 141-222 (273)
24 TIGR01656 Histidinol-ppas hist 97.7 2.2E-05 4.8E-10 69.7 2.9 103 305-423 2-128 (147)
25 TIGR00213 GmhB_yaeD D,D-heptos 97.6 5.9E-05 1.3E-09 68.7 4.1 102 304-423 2-133 (176)
26 TIGR01261 hisB_Nterm histidino 97.6 0.00012 2.6E-09 66.9 6.0 105 304-423 2-130 (161)
27 TIGR00338 serB phosphoserine p 97.5 1.2E-05 2.6E-10 74.5 -1.4 81 342-423 84-178 (219)
28 PRK08942 D,D-heptose 1,7-bisph 97.5 0.00016 3.4E-09 66.0 5.1 104 303-423 3-130 (181)
29 PLN02940 riboflavin kinase 97.4 2.3E-05 5E-10 80.7 -1.2 81 342-423 92-177 (382)
30 TIGR01489 DKMTPPase-SF 2,3-dik 97.4 0.00017 3.7E-09 64.5 3.8 49 342-391 71-120 (188)
31 PF05152 DUF705: Protein of un 97.3 0.00066 1.4E-08 68.2 8.2 72 300-393 119-192 (297)
32 TIGR01664 DNA-3'-Pase DNA 3'-p 97.3 0.00045 9.8E-09 63.3 6.1 107 303-423 13-137 (166)
33 PHA02530 pseT polynucleotide k 97.2 0.00014 2.9E-09 71.1 2.1 113 301-424 156-280 (300)
34 PF13419 HAD_2: Haloacid dehal 97.2 0.00024 5.3E-09 61.3 3.1 82 341-423 75-160 (176)
35 TIGR01672 AphA HAD superfamily 97.2 0.00037 8E-09 68.0 4.7 93 300-393 60-168 (237)
36 TIGR02253 CTE7 HAD superfamily 97.1 0.00033 7.2E-09 64.7 3.2 82 341-423 92-177 (221)
37 TIGR01509 HAD-SF-IA-v3 haloaci 97.1 0.00034 7.5E-09 62.1 3.2 80 342-423 84-167 (183)
38 PRK13582 thrH phosphoserine ph 97.1 9.4E-05 2E-09 67.7 -0.7 82 341-423 66-154 (205)
39 PRK06769 hypothetical protein; 97.1 0.0004 8.7E-09 63.6 3.5 102 304-423 5-120 (173)
40 TIGR01689 EcbF-BcbF capsule bi 97.0 0.0019 4.2E-08 57.5 6.7 84 304-405 2-99 (126)
41 KOG3109 Haloacid dehalogenase- 97.0 0.00031 6.8E-09 68.4 1.7 80 342-423 99-188 (244)
42 TIGR02137 HSK-PSP phosphoserin 96.9 0.00043 9.3E-09 65.5 2.2 49 342-391 67-115 (203)
43 TIGR02254 YjjG/YfnB HAD superf 96.9 0.00079 1.7E-08 62.0 3.7 81 342-423 96-180 (224)
44 PRK05446 imidazole glycerol-ph 96.9 0.0017 3.6E-08 67.0 6.3 107 302-423 1-131 (354)
45 PRK11009 aphA acid phosphatase 96.9 0.0035 7.6E-08 61.2 8.1 94 300-393 60-170 (237)
46 TIGR01449 PGP_bact 2-phosphogl 96.8 0.0009 1.9E-08 61.4 3.4 81 342-423 84-168 (213)
47 PLN02770 haloacid dehalogenase 96.8 0.00092 2E-08 64.3 3.5 81 342-423 107-191 (248)
48 TIGR01668 YqeG_hyp_ppase HAD s 96.8 0.00086 1.9E-08 61.3 2.9 94 301-423 23-118 (170)
49 TIGR01993 Pyr-5-nucltdase pyri 96.8 0.00059 1.3E-08 61.8 1.6 79 342-423 83-168 (184)
50 PLN03243 haloacid dehalogenase 96.8 0.00098 2.1E-08 65.3 3.2 81 342-423 108-192 (260)
51 COG0546 Gph Predicted phosphat 96.7 0.001 2.2E-08 62.9 3.0 81 342-423 88-172 (220)
52 PRK09449 dUMP phosphatase; Pro 96.7 0.0013 2.8E-08 61.1 3.6 81 342-423 94-178 (224)
53 TIGR01428 HAD_type_II 2-haloal 96.7 0.0012 2.6E-08 60.4 3.2 81 342-423 91-175 (198)
54 TIGR01454 AHBA_synth_RP 3-amin 96.7 0.0018 3.8E-08 59.7 3.9 82 341-423 73-158 (205)
55 TIGR01663 PNK-3'Pase polynucle 96.6 0.0025 5.5E-08 68.9 5.1 109 301-423 166-294 (526)
56 PLN02954 phosphoserine phospha 96.5 0.0011 2.4E-08 61.6 1.4 49 342-390 83-133 (224)
57 TIGR01670 YrbI-phosphatas 3-de 96.4 0.0026 5.6E-08 57.2 3.5 100 304-423 2-102 (154)
58 PRK10826 2-deoxyglucose-6-phos 96.3 0.0025 5.5E-08 59.5 2.9 82 342-424 91-176 (222)
59 TIGR01533 lipo_e_P4 5'-nucleot 96.3 0.0035 7.5E-08 62.3 3.8 92 301-393 73-172 (266)
60 PRK08238 hypothetical protein; 96.3 0.0041 8.8E-08 66.4 4.5 48 342-393 71-119 (479)
61 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.3 0.0052 1.1E-07 58.8 4.7 66 303-392 8-76 (242)
62 PRK11587 putative phosphatase; 96.3 0.0051 1.1E-07 57.5 4.6 82 341-424 81-166 (218)
63 PRK13222 phosphoglycolate phos 96.3 0.0042 9E-08 57.4 3.9 81 342-423 92-176 (226)
64 TIGR01422 phosphonatase phosph 96.3 0.0041 8.8E-08 59.4 3.9 82 342-423 98-184 (253)
65 PLN02575 haloacid dehalogenase 96.2 0.0038 8.3E-08 65.0 3.8 81 342-423 215-299 (381)
66 PRK13226 phosphoglycolate phos 96.2 0.0046 9.9E-08 58.6 4.0 82 341-423 93-178 (229)
67 COG1011 Predicted hydrolase (H 96.2 0.0043 9.3E-08 57.3 3.5 82 342-424 98-182 (229)
68 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.2 0.013 2.8E-07 53.0 6.6 81 342-423 79-173 (201)
69 TIGR02009 PGMB-YQAB-SF beta-ph 96.1 0.0028 6.1E-08 56.7 1.8 79 342-423 87-169 (185)
70 PRK09456 ?-D-glucose-1-phospha 96.1 0.0028 6.1E-08 58.5 1.8 84 341-424 82-169 (199)
71 PRK10725 fructose-1-P/6-phosph 96.0 0.0035 7.6E-08 56.5 2.2 81 342-424 87-170 (188)
72 COG0560 SerB Phosphoserine pho 95.8 0.013 2.9E-07 56.0 5.2 80 342-422 76-169 (212)
73 TIGR01548 HAD-SF-IA-hyp1 haloa 95.8 0.0097 2.1E-07 54.7 4.1 79 344-423 107-188 (197)
74 PRK09484 3-deoxy-D-manno-octul 95.8 0.01 2.2E-07 54.9 4.3 102 302-423 20-122 (183)
75 TIGR02252 DREG-2 REG-2-like, H 95.8 0.0087 1.9E-07 54.8 3.7 79 343-423 105-187 (203)
76 TIGR03351 PhnX-like phosphonat 95.8 0.0083 1.8E-07 55.6 3.6 82 342-423 86-173 (220)
77 PRK13223 phosphoglycolate phos 95.8 0.0086 1.9E-07 58.7 3.8 81 342-423 100-184 (272)
78 TIGR01549 HAD-SF-IA-v1 haloaci 95.7 0.014 3.1E-07 51.0 4.4 80 341-423 62-144 (154)
79 PRK11133 serB phosphoserine ph 95.6 0.0027 5.8E-08 64.5 -0.5 81 342-423 180-274 (322)
80 PRK13478 phosphonoacetaldehyde 95.6 0.015 3.3E-07 56.2 4.6 83 342-424 100-187 (267)
81 PRK00192 mannosyl-3-phosphogly 95.5 0.052 1.1E-06 52.8 7.9 58 303-383 4-62 (273)
82 TIGR02247 HAD-1A3-hyp Epoxide 95.4 0.0059 1.3E-07 56.4 1.1 82 341-423 92-179 (211)
83 PHA02597 30.2 hypothetical pro 95.3 0.0078 1.7E-07 55.1 1.6 80 342-423 73-155 (197)
84 PRK10563 6-phosphogluconate ph 95.3 0.0067 1.5E-07 56.4 1.0 80 342-424 87-170 (221)
85 PLN02779 haloacid dehalogenase 95.2 0.018 4E-07 57.0 3.8 82 342-424 143-230 (286)
86 PF08282 Hydrolase_3: haloacid 95.2 0.049 1.1E-06 49.9 6.3 54 306-382 1-55 (254)
87 TIGR01990 bPGM beta-phosphoglu 95.2 0.012 2.7E-07 52.6 2.2 79 342-423 86-168 (185)
88 COG0561 Cof Predicted hydrolas 95.1 0.066 1.4E-06 51.3 7.3 58 303-383 3-61 (264)
89 TIGR01691 enolase-ppase 2,3-di 94.8 0.019 4.1E-07 55.4 2.6 82 341-423 93-179 (220)
90 PRK09552 mtnX 2-hydroxy-3-keto 94.7 0.072 1.6E-06 50.1 6.1 82 342-423 73-170 (219)
91 TIGR02461 osmo_MPG_phos mannos 94.5 0.16 3.5E-06 48.6 8.2 53 306-382 2-55 (225)
92 PLN02811 hydrolase 94.5 0.02 4.3E-07 53.7 1.9 82 342-424 77-168 (220)
93 PF08645 PNK3P: Polynucleotide 94.5 0.049 1.1E-06 49.8 4.4 50 304-367 1-54 (159)
94 PRK06698 bifunctional 5'-methy 94.4 0.034 7.5E-07 58.4 3.5 79 342-423 329-410 (459)
95 PF13344 Hydrolase_6: Haloacid 94.3 0.083 1.8E-06 44.8 5.1 50 306-379 1-51 (101)
96 TIGR01493 HAD-SF-IA-v2 Haloaci 94.3 0.0071 1.5E-07 54.0 -1.5 75 342-423 89-166 (175)
97 PRK03669 mannosyl-3-phosphogly 94.3 0.14 3.1E-06 49.7 7.4 59 301-382 5-64 (271)
98 TIGR01487 SPP-like sucrose-pho 94.2 0.14 3E-06 47.7 6.9 57 304-383 2-59 (215)
99 PRK10513 sugar phosphate phosp 94.1 0.14 3E-06 49.1 6.9 57 303-382 3-60 (270)
100 TIGR01544 HAD-SF-IE haloacid d 93.9 0.089 1.9E-06 52.9 5.3 83 341-423 119-221 (277)
101 PLN02919 haloacid dehalogenase 93.9 0.054 1.2E-06 63.1 4.3 80 344-423 162-245 (1057)
102 PRK10530 pyridoxal phosphate ( 93.9 0.19 4E-06 48.0 7.2 57 303-382 3-60 (272)
103 TIGR03333 salvage_mtnX 2-hydro 93.9 0.088 1.9E-06 49.4 4.8 47 341-387 68-115 (214)
104 PRK01158 phosphoglycolate phos 93.7 0.25 5.4E-06 46.0 7.6 57 304-383 4-61 (230)
105 TIGR00099 Cof-subfamily Cof su 93.7 0.18 3.9E-06 48.1 6.7 54 306-382 2-56 (256)
106 TIGR02463 MPGP_rel mannosyl-3- 93.5 0.21 4.6E-06 46.5 6.7 54 306-382 2-56 (221)
107 PTZ00445 p36-lilke protein; Pr 93.4 0.033 7.1E-07 54.2 1.2 60 300-371 40-104 (219)
108 PF09419 PGP_phosphatase: Mito 93.4 0.11 2.4E-06 48.6 4.6 95 298-422 36-145 (168)
109 PRK15126 thiamin pyrimidine py 93.3 0.24 5.2E-06 47.8 6.9 56 304-382 3-59 (272)
110 PRK10976 putative hydrolase; P 93.2 0.25 5.3E-06 47.4 6.9 55 304-381 3-58 (266)
111 smart00775 LNS2 LNS2 domain. T 93.0 0.29 6.4E-06 44.6 6.7 60 306-378 2-66 (157)
112 KOG2914 Predicted haloacid-hal 93.0 0.017 3.7E-07 56.2 -1.5 83 341-424 90-180 (222)
113 TIGR01486 HAD-SF-IIB-MPGP mann 92.8 0.31 6.8E-06 46.8 6.9 54 306-382 2-56 (256)
114 COG2179 Predicted hydrolase of 92.8 0.18 3.8E-06 47.7 4.9 67 294-382 19-86 (175)
115 TIGR01482 SPP-subfamily Sucros 92.6 0.31 6.8E-06 45.1 6.5 53 306-381 1-54 (225)
116 TIGR02726 phenyl_P_delta pheny 92.5 0.17 3.7E-06 47.0 4.4 101 303-423 7-108 (169)
117 TIGR01456 CECR5 HAD-superfamil 92.0 0.26 5.6E-06 49.6 5.5 53 304-380 1-62 (321)
118 COG0241 HisB Histidinol phosph 92.0 0.15 3.3E-06 48.3 3.6 106 303-422 5-131 (181)
119 TIGR01484 HAD-SF-IIB HAD-super 91.4 0.44 9.6E-06 43.7 5.8 53 306-380 2-55 (204)
120 PRK10444 UMP phosphatase; Prov 91.3 0.33 7.1E-06 47.4 5.1 54 304-381 2-56 (248)
121 PTZ00174 phosphomannomutase; P 90.6 0.66 1.4E-05 44.7 6.5 51 303-376 5-56 (247)
122 TIGR01490 HAD-SF-IB-hyp1 HAD-s 90.5 0.53 1.2E-05 42.9 5.5 81 342-423 86-181 (202)
123 PF11019 DUF2608: Protein of u 90.2 0.34 7.3E-06 47.8 4.2 122 302-424 19-189 (252)
124 TIGR01488 HAD-SF-IB Haloacid D 90.2 0.58 1.2E-05 41.5 5.3 49 342-391 72-121 (177)
125 TIGR01458 HAD-SF-IIA-hyp3 HAD- 89.9 0.48 1E-05 46.2 4.9 47 304-370 2-49 (257)
126 TIGR01452 PGP_euk phosphoglyco 89.9 0.5 1.1E-05 46.4 5.1 41 304-368 3-44 (279)
127 PF06941 NT5C: 5' nucleotidase 89.7 0.058 1.3E-06 49.9 -1.5 29 342-370 72-101 (191)
128 PF06888 Put_Phosphatase: Puta 89.7 0.49 1.1E-05 46.5 4.7 49 342-391 70-121 (234)
129 PLN02645 phosphoglycolate phos 89.6 0.49 1.1E-05 47.4 4.9 53 303-379 28-81 (311)
130 COG4359 Uncharacterized conser 89.2 0.91 2E-05 43.9 6.0 52 342-393 72-124 (220)
131 PRK10187 trehalose-6-phosphate 89.0 0.9 2E-05 44.6 6.1 59 303-379 14-74 (266)
132 PRK10748 flavin mononucleotide 88.9 0.25 5.4E-06 47.2 2.1 76 342-423 112-190 (238)
133 COG3882 FkbH Predicted enzyme 88.8 0.9 2E-05 49.3 6.3 108 300-424 219-338 (574)
134 PLN02423 phosphomannomutase 88.6 1.1 2.4E-05 43.4 6.4 56 300-381 4-59 (245)
135 PRK12702 mannosyl-3-phosphogly 88.5 1.2 2.6E-05 45.5 6.7 57 304-383 2-59 (302)
136 TIGR01675 plant-AP plant acid 87.8 0.71 1.5E-05 45.3 4.5 93 300-393 74-172 (229)
137 TIGR01457 HAD-SF-IIA-hyp2 HAD- 86.8 1.1 2.4E-05 43.4 5.2 39 305-367 3-42 (249)
138 COG0647 NagD Predicted sugar p 86.5 1.1 2.4E-05 45.0 5.0 54 303-380 8-62 (269)
139 COG2503 Predicted secreted aci 86.4 0.73 1.6E-05 46.1 3.6 91 300-391 76-175 (274)
140 TIGR01485 SPP_plant-cyano sucr 86.3 1.3 2.9E-05 42.3 5.4 60 303-382 1-61 (249)
141 PLN02887 hydrolase family prot 86.2 1.6 3.6E-05 48.1 6.7 58 302-382 307-365 (580)
142 PRK14502 bifunctional mannosyl 83.7 3 6.5E-05 47.0 7.3 60 300-382 413-473 (694)
143 TIGR01460 HAD-SF-IIA Haloacid 82.4 2 4.2E-05 41.3 4.6 50 306-379 1-55 (236)
144 PLN03017 trehalose-phosphatase 82.2 2.2 4.8E-05 44.7 5.2 60 300-377 108-167 (366)
145 TIGR02244 HAD-IG-Ncltidse HAD 81.8 1.9 4.1E-05 44.7 4.6 53 339-391 180-240 (343)
146 PF03767 Acid_phosphat_B: HAD 81.4 1.5 3.3E-05 42.4 3.6 73 301-379 70-152 (229)
147 PRK10725 fructose-1-P/6-phosph 79.2 1.2 2.6E-05 40.1 1.9 16 303-318 5-20 (188)
148 KOG3120 Predicted haloacid deh 79.1 1 2.2E-05 44.6 1.5 54 342-396 83-138 (256)
149 PLN02151 trehalose-phosphatase 78.2 4.2 9.1E-05 42.4 5.7 60 300-377 95-154 (354)
150 PRK11587 putative phosphatase; 77.7 1.2 2.6E-05 41.6 1.5 15 304-318 4-18 (218)
151 TIGR00685 T6PP trehalose-phosp 77.2 2.5 5.3E-05 40.7 3.5 48 302-367 2-51 (244)
152 PLN02580 trehalose-phosphatase 74.9 5.9 0.00013 41.8 5.8 61 300-378 116-176 (384)
153 TIGR01548 HAD-SF-IA-hyp1 haloa 74.6 1.4 3E-05 40.5 1.0 14 305-318 2-15 (197)
154 TIGR01993 Pyr-5-nucltdase pyri 74.4 1.7 3.7E-05 39.3 1.5 14 305-318 2-15 (184)
155 PRK11590 hypothetical protein; 73.9 4.8 0.0001 37.8 4.4 39 342-380 94-134 (211)
156 COG4502 5'(3')-deoxyribonucleo 73.7 1.9 4.1E-05 40.2 1.6 30 342-371 67-96 (180)
157 COG1877 OtsB Trehalose-6-phosp 73.5 7.1 0.00015 39.2 5.8 61 299-377 14-76 (266)
158 PHA02597 30.2 hypothetical pro 73.3 1.7 3.8E-05 39.7 1.3 15 304-318 3-17 (197)
159 TIGR01545 YfhB_g-proteo haloac 73.0 7.8 0.00017 36.8 5.7 38 342-379 93-132 (210)
160 PRK11590 hypothetical protein; 72.7 2 4.4E-05 40.3 1.7 17 302-318 5-21 (211)
161 TIGR02253 CTE7 HAD superfamily 72.3 2.1 4.6E-05 39.5 1.6 15 304-318 3-17 (221)
162 PF00702 Hydrolase: haloacid d 71.0 2 4.4E-05 38.7 1.2 80 340-423 124-205 (215)
163 TIGR03351 PhnX-like phosphonat 70.4 2.3 5E-05 39.4 1.4 15 304-318 2-16 (220)
164 PRK13226 phosphoglycolate phos 70.4 2.2 4.7E-05 40.4 1.3 16 303-318 12-27 (229)
165 PLN03243 haloacid dehalogenase 70.1 1.5 3.3E-05 43.0 0.2 20 299-318 20-39 (260)
166 TIGR02009 PGMB-YQAB-SF beta-ph 69.8 2.3 5.1E-05 37.9 1.3 15 304-318 2-16 (185)
167 PF05116 S6PP: Sucrose-6F-phos 69.7 6.9 0.00015 38.1 4.6 54 302-379 1-56 (247)
168 PRK13223 phosphoglycolate phos 69.1 2.8 6E-05 41.2 1.8 16 303-318 13-28 (272)
169 PLN02770 haloacid dehalogenase 68.9 2.7 5.9E-05 40.4 1.6 16 303-318 22-37 (248)
170 TIGR01422 phosphonatase phosph 68.4 2.9 6.3E-05 39.9 1.7 15 304-318 3-17 (253)
171 TIGR02252 DREG-2 REG-2-like, H 68.4 2.5 5.4E-05 38.6 1.2 14 305-318 2-15 (203)
172 TIGR01511 ATPase-IB1_Cu copper 68.1 12 0.00026 40.9 6.5 42 341-382 403-445 (562)
173 PRK13478 phosphonoacetaldehyde 67.7 2.9 6.2E-05 40.5 1.5 16 303-318 4-19 (267)
174 PRK10748 flavin mononucleotide 67.6 3 6.6E-05 39.8 1.7 15 304-318 11-25 (238)
175 TIGR01549 HAD-SF-IA-v1 haloaci 67.4 2.3 5E-05 37.0 0.7 14 305-318 1-14 (154)
176 COG3769 Predicted hydrolase (H 67.2 15 0.00033 36.7 6.3 58 302-383 6-64 (274)
177 TIGR01990 bPGM beta-phosphoglu 66.3 2.8 6.1E-05 37.4 1.1 14 305-318 1-14 (185)
178 TIGR01454 AHBA_synth_RP 3-amin 66.0 2.4 5.1E-05 39.0 0.5 13 306-318 1-13 (205)
179 TIGR01449 PGP_bact 2-phosphogl 64.4 2.7 5.8E-05 38.5 0.5 13 306-318 1-13 (213)
180 PF08235 LNS2: LNS2 (Lipin/Ned 63.7 17 0.00037 33.9 5.7 63 305-379 1-64 (157)
181 PLN02779 haloacid dehalogenase 63.4 4 8.6E-05 40.5 1.6 18 301-318 38-55 (286)
182 PRK14501 putative bifunctional 63.2 11 0.00024 42.3 5.2 62 300-379 489-552 (726)
183 PF12710 HAD: haloacid dehalog 63.2 6.5 0.00014 35.1 2.8 47 344-390 86-138 (192)
184 TIGR01493 HAD-SF-IA-v2 Haloaci 63.2 3.5 7.6E-05 36.7 1.1 13 306-318 2-14 (175)
185 TIGR02254 YjjG/YfnB HAD superf 63.0 3.8 8.2E-05 37.6 1.3 15 304-318 2-16 (224)
186 TIGR01680 Veg_Stor_Prot vegeta 62.9 9.3 0.0002 38.7 4.1 89 302-393 100-197 (275)
187 TIGR02471 sucr_syn_bact_C sucr 62.8 13 0.00028 35.2 4.9 12 306-317 2-13 (236)
188 PRK10826 2-deoxyglucose-6-phos 62.6 4.5 9.8E-05 37.7 1.7 17 302-318 6-22 (222)
189 TIGR01428 HAD_type_II 2-haloal 62.4 3.9 8.5E-05 37.3 1.3 15 304-318 2-16 (198)
190 TIGR01491 HAD-SF-IB-PSPlk HAD- 62.0 4.7 0.0001 36.3 1.7 16 303-318 4-19 (201)
191 PF13419 HAD_2: Haloacid dehal 62.0 3.8 8.2E-05 35.2 1.0 13 306-318 1-13 (176)
192 PRK09449 dUMP phosphatase; Pro 61.9 3.9 8.6E-05 37.9 1.2 14 304-317 4-17 (224)
193 TIGR02247 HAD-1A3-hyp Epoxide 61.4 4.6 9.9E-05 37.2 1.5 15 304-318 3-17 (211)
194 PRK13222 phosphoglycolate phos 60.8 4.3 9.3E-05 37.4 1.2 15 304-318 7-21 (226)
195 PRK10563 6-phosphogluconate ph 59.8 5 0.00011 37.3 1.5 16 303-318 4-19 (221)
196 TIGR01509 HAD-SF-IA-v3 haloaci 58.8 4.3 9.3E-05 35.8 0.8 14 305-318 1-14 (183)
197 TIGR01512 ATPase-IB2_Cd heavy 58.4 6.3 0.00014 42.7 2.2 44 340-383 359-404 (536)
198 KOG3085 Predicted hydrolase (H 52.1 5 0.00011 39.7 0.2 81 340-423 111-195 (237)
199 TIGR01525 ATPase-IB_hvy heavy 50.3 24 0.00053 38.3 5.0 46 341-387 382-429 (556)
200 PRK06698 bifunctional 5'-methy 50.1 5.5 0.00012 42.0 0.1 16 303-318 241-256 (459)
201 PLN02382 probable sucrose-phos 47.6 42 0.00091 35.5 6.2 18 300-317 6-23 (413)
202 PLN02575 haloacid dehalogenase 47.0 9.1 0.0002 40.3 1.1 18 301-318 129-146 (381)
203 PRK09552 mtnX 2-hydroxy-3-keto 44.3 12 0.00026 35.1 1.4 16 303-318 3-18 (219)
204 COG1011 Predicted hydrolase (H 43.0 15 0.00031 33.9 1.7 16 303-318 4-19 (229)
205 KOG2134 Polynucleotide kinase 42.7 34 0.00074 36.6 4.5 58 301-368 73-130 (422)
206 PRK09456 ?-D-glucose-1-phospha 41.2 15 0.00032 33.8 1.5 14 305-318 2-15 (199)
207 PF02358 Trehalose_PPase: Treh 41.1 41 0.00088 32.0 4.5 51 307-375 1-53 (235)
208 TIGR01545 YfhB_g-proteo haloac 39.0 17 0.00036 34.6 1.5 17 302-318 4-20 (210)
209 PLN02205 alpha,alpha-trehalose 38.7 48 0.001 38.5 5.3 60 300-379 593-654 (854)
210 KOG4549 Magnesium-dependent ph 38.4 1.6E+02 0.0034 27.3 7.4 118 302-422 4-131 (144)
211 TIGR02826 RNR_activ_nrdG3 anae 38.3 53 0.0011 29.9 4.6 71 330-420 64-136 (147)
212 PLN03063 alpha,alpha-trehalose 37.1 56 0.0012 37.6 5.5 64 300-378 504-569 (797)
213 PF05822 UMPH-1: Pyrimidine 5' 33.3 48 0.001 33.2 3.7 51 341-391 88-142 (246)
214 PF12710 HAD: haloacid dehalog 30.8 27 0.00059 31.0 1.4 13 306-318 1-13 (192)
215 PF05761 5_nucleotid: 5' nucle 30.2 93 0.002 33.6 5.5 53 339-391 179-240 (448)
216 TIGR01490 HAD-SF-IB-hyp1 HAD-s 29.7 26 0.00057 31.8 1.1 13 306-318 2-14 (202)
217 PLN03064 alpha,alpha-trehalose 27.9 1.1E+02 0.0024 36.1 6.0 71 300-379 588-660 (934)
218 PLN02177 glycerol-3-phosphate 27.9 44 0.00095 36.4 2.6 23 360-382 124-147 (497)
219 cd02514 GT13_GLCNAC-TI GT13_GL 27.1 49 0.0011 34.3 2.7 40 340-379 6-52 (334)
220 PLN02919 haloacid dehalogenase 24.8 41 0.00088 39.9 1.8 17 302-318 74-90 (1057)
221 cd06537 CIDE_N_B CIDE_N domain 22.2 1.2E+02 0.0027 25.6 3.6 16 303-318 39-54 (81)
222 cd06539 CIDE_N_A CIDE_N domain 21.0 1.3E+02 0.0029 25.2 3.6 16 303-318 40-55 (78)
223 PRK10671 copA copper exporting 21.0 1.2E+02 0.0027 34.7 4.6 41 343-383 650-691 (834)
224 PF00702 Hydrolase: haloacid d 20.5 59 0.0013 29.2 1.6 14 305-318 3-16 (215)
225 cd06536 CIDE_N_ICAD CIDE_N dom 20.3 1.4E+02 0.003 25.1 3.6 17 302-318 41-57 (80)
226 PF13701 DDE_Tnp_1_4: Transpos 20.3 2.6E+02 0.0057 30.0 6.6 83 302-384 138-242 (448)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=4.7e-34 Score=278.46 Aligned_cols=131 Identities=56% Similarity=0.875 Sum_probs=124.1
Q ss_pred CCCccCCCCceEEEEeccccccccc--ccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHH
Q 014389 294 SPKETQGRKSVTLVLDLDETLVHST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIY 371 (425)
Q Consensus 294 ~P~~~~~~kKltLVLDLDeTLVHSs--~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~Y 371 (425)
.|.+....+|++||||||||||||+ .++...++|.+++.+++..+.+||.+|||+++||++++++||++||||+.+.|
T Consensus 80 ~~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~Y 159 (262)
T KOG1605|consen 80 LPLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEVY 159 (262)
T ss_pred CCcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHHH
Confidence 3445557889999999999999999 77777899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCCC
Q 014389 372 AAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 424 (425)
Q Consensus 372 Ad~ILd~LDP~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP~ 424 (425)
|.+|++.|||.+++|+||+||++|.+.+|+|+|||+.+|+|+++||||||+|+
T Consensus 160 a~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~ 212 (262)
T KOG1605|consen 160 ADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQ 212 (262)
T ss_pred HHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChH
Confidence 99999999998899999999999999999999999999999999999999996
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=3e-31 Score=240.50 Aligned_cols=122 Identities=60% Similarity=0.927 Sum_probs=115.1
Q ss_pred ceEEEEecccccccccccccC-CCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCC
Q 014389 303 SVTLVLDLDETLVHSTLEYCD-DADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~-~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP 381 (425)
|++|||||||||||+++.+.. ..+|.+.+.+++....+||++|||+.+||++|+++|||+|||++.+.||++|++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 579999999999999988765 6788888888888889999999999999999999999999999999999999999999
Q ss_pred CCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCCC
Q 014389 382 DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 424 (425)
Q Consensus 382 ~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP~ 424 (425)
.+.+|+++++|++|....|.|.|||+.+|++++++|||||+|.
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~ 123 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPY 123 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChh
Confidence 9889999999999999999999999999999999999999985
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=99.96 E-value=1.7e-28 Score=218.15 Aligned_cols=117 Identities=50% Similarity=0.827 Sum_probs=96.4
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCC
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG 383 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~ 383 (425)
++|||||||||||+........++... . ....++|++|||+++||++++++|||+|||++.+.||++|++.|||.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 689999999999998665443333222 2 567889999999999999999999999999999999999999999988
Q ss_pred CeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCCC
Q 014389 384 KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 424 (425)
Q Consensus 384 klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP~ 424 (425)
.+|.++++|++|....|.++|||+.+|+++++||||||+|.
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~ 117 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPR 117 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GG
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHH
Confidence 89999999999999888889999999999999999999985
No 4
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.95 E-value=3.8e-28 Score=220.11 Aligned_cols=123 Identities=32% Similarity=0.466 Sum_probs=102.7
Q ss_pred CCCceEEEEecccccccccccccCCCCce------------EEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCC
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFT------------FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTAS 367 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~------------~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs 367 (425)
.++|++||||||||||||+..+....... -...|......+++++|||+++||+++++.|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 57899999999999999987653322110 012233336678999999999999999999999999999
Q ss_pred chHHHHHHHHHHCCCCCeeeeEE-EccceeecCCcEEEeCc-CcCCCCCCEEEEECCCCC
Q 014389 368 QSIYAAQLLDILDPDGKLISRRV-YRESCIFSDGTYTKDLT-VLGVDLAKVAIIDNSPQV 425 (425)
Q Consensus 368 ~~~YAd~ILd~LDP~~klfs~RL-~ResC~~~~g~yiKDLs-~LGrDLskVVIIDDsP~V 425 (425)
.+.||++|++.|||.+.+|++|+ +|++|. |.+.|||+ .+|+++++||||||+|.|
T Consensus 83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~ 139 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDV 139 (156)
T ss_pred cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHH
Confidence 99999999999999998997775 599985 88999995 569999999999999864
No 5
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=99.89 E-value=2e-23 Score=196.40 Aligned_cols=109 Identities=22% Similarity=0.210 Sum_probs=89.2
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~L 379 (425)
+.+|++|||||||||||+... ...+|+.+|||+++||++++++|||+||||+++.||+.+++.|
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~----------------~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSP----------------AETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCCcEEEEeCCCceEccccc----------------CCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHh
Confidence 567899999999999997421 1246789999999999999999999999999999999999999
Q ss_pred CCCC-CeeeeEEEcccee------ecCCc-EEEeCcCc------CCCCCCEEEEECCCC
Q 014389 380 DPDG-KLISRRVYRESCI------FSDGT-YTKDLTVL------GVDLAKVAIIDNSPQ 424 (425)
Q Consensus 380 DP~~-klfs~RL~ResC~------~~~g~-yiKDLs~L------GrDLskVVIIDDsP~ 424 (425)
++.+ ..+..++++++|. ...|. ++|||+.+ ++++++||||||+|.
T Consensus 82 ~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~ 140 (195)
T TIGR02245 82 GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRR 140 (195)
T ss_pred cccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHH
Confidence 8643 2355667778883 23455 59999987 338899999999985
No 6
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.87 E-value=8.7e-22 Score=175.25 Aligned_cols=123 Identities=50% Similarity=0.853 Sum_probs=108.3
Q ss_pred CceEEEEecccccccccc---cccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHH
Q 014389 302 KSVTLVLDLDETLVHSTL---EYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~---~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~ 378 (425)
+|++|||||||||||+.. .+.....+...+.+......+++++|||+.+||+++.+.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 588999999999999963 22233445666667788889999999999999999999999999999999999999999
Q ss_pred HCCCCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCCC
Q 014389 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 424 (425)
Q Consensus 379 LDP~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP~ 424 (425)
+++.+.+|...+++++|...+..|.|+|+++|++++++|+|||++.
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~ 126 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPD 126 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHH
Confidence 9997667788999999998877799999999999999999999974
No 7
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.85 E-value=1.4e-21 Score=196.78 Aligned_cols=110 Identities=34% Similarity=0.579 Sum_probs=103.3
Q ss_pred cCCCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHH
Q 014389 298 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 298 ~~~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd 377 (425)
+..++++||||+|.++|||..|. ...+|.+++|||++.||.+++++|||||||+....||.+|++
T Consensus 184 Py~Qp~yTLVleledvLVhpdws---------------~~tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d 248 (393)
T KOG2832|consen 184 PYEQPPYTLVLELEDVLVHPDWS---------------YKTGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLD 248 (393)
T ss_pred cccCCCceEEEEeeeeEeccchh---------------hhcCceeccCchHHHHHHhhcccceEEEEecCCccchhhhHh
Confidence 45788999999999999999886 246899999999999999999999999999999999999999
Q ss_pred HHCCCCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 378 ILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 378 ~LDP~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
.|||+| +|+++|||++|.+.+|..+|||+.|+||+++||+||=.+
T Consensus 249 ~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~ 293 (393)
T KOG2832|consen 249 ALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDA 293 (393)
T ss_pred hcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccc
Confidence 999996 899999999999999999999999999999999999655
No 8
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.83 E-value=3.3e-21 Score=206.51 Aligned_cols=123 Identities=33% Similarity=0.474 Sum_probs=97.9
Q ss_pred CCCceEEEEecccccccccccccC--------CCCc-------eEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEE
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCD--------DADF-------TFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF 364 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~--------~~df-------~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIf 364 (425)
.++++.||+|||.||+|+...+.- ...+ .+.+........+|||+|||+++||++++++||++||
T Consensus 143 ~~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVy 222 (635)
T KOG0323|consen 143 NRKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVY 222 (635)
T ss_pred hhhcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEE
Confidence 344589999999999999743211 0001 1111111345579999999999999999999999999
Q ss_pred cCCchHHHHHHHHHHCCCCCeeeeEEE-ccceeecCCcEEEeCcCc-CCCCCCEEEEECCCCC
Q 014389 365 TASQSIYAAQLLDILDPDGKLISRRVY-RESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQV 425 (425)
Q Consensus 365 TAs~~~YAd~ILd~LDP~~klfs~RL~-ResC~~~~g~yiKDLs~L-GrDLskVVIIDDsP~V 425 (425)
|.|.+.||.+|+++|||.++||++|++ |++ ..+..++||..+ .++.++||||||++.|
T Consensus 223 Tmg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dV 282 (635)
T KOG0323|consen 223 TMGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDV 282 (635)
T ss_pred eccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCcccc
Confidence 999999999999999999999999998 766 445667888877 5788999999999886
No 9
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.83 E-value=5.3e-21 Score=195.60 Aligned_cols=126 Identities=48% Similarity=0.735 Sum_probs=118.6
Q ss_pred cCCCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHH
Q 014389 298 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 298 ~~~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd 377 (425)
....++++|++|||+||+||....+...+|...+......+.+||.+|||+++||..++++|++++||++.+.||++|++
T Consensus 207 ~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~d 286 (390)
T COG5190 207 KSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVLD 286 (390)
T ss_pred cCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcchHHH
Confidence 44567889999999999999988888888888877777789999999999999999999999999999999999999999
Q ss_pred HHCCCCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCCC
Q 014389 378 ILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 424 (425)
Q Consensus 378 ~LDP~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP~ 424 (425)
.|++.+ .|++|+||++|....|.|+|||.++||++.+|||||++|.
T Consensus 287 ~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~ 332 (390)
T COG5190 287 ILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPA 332 (390)
T ss_pred hccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChh
Confidence 999998 9999999999999999999999999999999999999985
No 10
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.52 E-value=4.9e-08 Score=100.95 Aligned_cols=124 Identities=32% Similarity=0.491 Sum_probs=95.7
Q ss_pred CCCceEEEEecccccccccccccC-C---------CCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCch
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCD-D---------ADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQS 369 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~-~---------~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~ 369 (425)
..+++.||.|+|.|.+|+...+.. + ..+-....+......+++++||++..|+...++.||+.+||.|.+
T Consensus 23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~ 102 (390)
T COG5190 23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR 102 (390)
T ss_pred cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence 456778999999999999876511 0 011111122223557899999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCeeeeEEEccceeecCCcEEEeCcCc-CCCCCCEEEEECCCCC
Q 014389 370 IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQV 425 (425)
Q Consensus 370 ~YAd~ILd~LDP~~klfs~RL~ResC~~~~g~yiKDLs~L-GrDLskVVIIDDsP~V 425 (425)
.||+.+++++||.|++|..|....+ ...+.-.|-++++ ..+-+.++|+||++++
T Consensus 103 ~~~~~~~~i~d~~g~~~~d~~~~~~--~~~~~~~~s~~~l~p~~~n~~vi~~d~~~~ 157 (390)
T COG5190 103 AYAERIAKIIDPTGKLFNDRILSRD--ESGSLSQKSLSRLFPKDQNMVVIIDDRGDV 157 (390)
T ss_pred cchhhhhhccccccccccccccccc--ccccchhhhhhhcCcccccccccccccccc
Confidence 9999999999999999988887332 1234445777766 6888999999999874
No 11
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.37 E-value=1.3e-07 Score=82.62 Aligned_cols=109 Identities=15% Similarity=0.140 Sum_probs=72.6
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCC-chHHHHHHHHHHCC
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDILDP 381 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs-~~~YAd~ILd~LDP 381 (425)
+.||+|||+||...-..... .+-. .. . . .+.||+.++|++++ +.+.++|.|++ .+.++..+++.+.+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~-~~~~----~~-~--~---~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVG-EDPI----ID-L--E---VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCccccc-CCcc----hh-h--H---HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 36899999999876210000 0000 00 0 0 57899999999998 57999999999 99999999998762
Q ss_pred ------CCCeeeeEEEccceeecCCcEEEeCcCcC--CCCCCEEEEECCCC
Q 014389 382 ------DGKLISRRVYRESCIFSDGTYTKDLTVLG--VDLAKVAIIDNSPQ 424 (425)
Q Consensus 382 ------~~klfs~RL~ResC~~~~g~yiKDLs~LG--rDLskVVIIDDsP~ 424 (425)
-.++|...+..+.- -....|.+=+..+| ..++++++|||++.
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~ 119 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPD 119 (128)
T ss_pred cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHh
Confidence 12345444443221 11123455566778 99999999999873
No 12
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.19 E-value=2.4e-06 Score=79.53 Aligned_cols=119 Identities=14% Similarity=0.123 Sum_probs=77.3
Q ss_pred eEEEEecccccccccccccCCCCceEEEEec---ceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCC-chHHHHHHHHH
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFN---MKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDI 378 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~---~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs-~~~YAd~ILd~ 378 (425)
..+|||||+||..-..-.+.+..+..--..+ .......+.++||+.++|+.+. +.+.+.|.|++ .+.++..+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~ 82 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT 82 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence 4789999999965443222221111000000 0112345788999999999998 67999999988 99999999999
Q ss_pred HCCC--C------CeeeeEEEccceeecCCcE----EEeCcC-c--CCCCCCEEEEECCCC
Q 014389 379 LDPD--G------KLISRRVYRESCIFSDGTY----TKDLTV-L--GVDLAKVAIIDNSPQ 424 (425)
Q Consensus 379 LDP~--~------klfs~RL~ResC~~~~g~y----iKDLs~-L--GrDLskVVIIDDsP~ 424 (425)
++.. + .+|...+..+.. ..... .+-+.. + |-+++++++|||++.
T Consensus 83 ~~l~~~~~~~~~~~~Fd~iv~~~~~--~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~ 141 (174)
T TIGR01685 83 FEITYAGKTVPMHSLFDDRIEIYKP--NKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTD 141 (174)
T ss_pred CCcCCCCCcccHHHhceeeeeccCC--chHHHHHHHHHHhhhcccCCCCHHHeEEEcChhH
Confidence 9865 1 478777775431 11111 111222 2 578899999999974
No 13
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.18 E-value=9.5e-07 Score=72.66 Aligned_cols=103 Identities=21% Similarity=0.286 Sum_probs=70.3
Q ss_pred EEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcC-ceEEEEcCCchHHHHHHHHHHCCCC
Q 014389 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDG 383 (425)
Q Consensus 305 tLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~-YEIVIfTAs~~~YAd~ILd~LDP~~ 383 (425)
++|||+||||+....... ....+..+|++.++|+++.+. +.++|.|++.+.++..+++.+....
T Consensus 1 ~~vfD~D~tl~~~~~~~~---------------~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA---------------EIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCcccc---------------ccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 479999999988642110 023467899999999999965 9999999999999999999986542
Q ss_pred CeeeeEEEccceeec----------------C---CcEEEeCcCcCCCCCCEEEEECCC
Q 014389 384 KLISRRVYRESCIFS----------------D---GTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 384 klfs~RL~ResC~~~----------------~---g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
++...+..+..... . ..+..-+..++.+...++.|+|++
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~ 123 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL 123 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH
Confidence 34444433222111 1 111122334566788999999986
No 14
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.04 E-value=1.6e-06 Score=80.35 Aligned_cols=82 Identities=12% Similarity=0.139 Sum_probs=67.5
Q ss_pred EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeec---CCcEEEeCcCcCCCCCCE
Q 014389 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKV 416 (425)
Q Consensus 341 yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~---~g~yiKDLs~LGrDLskV 416 (425)
.+.+.||+.++|++++ +.+.++|.|++.+.++..+++.++-.+ +|...+..+.+... ...|.+-+..+|.+++++
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 158 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEA 158 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence 3678899999999998 579999999999999999999998775 88888876665432 234556667788889999
Q ss_pred EEEECCC
Q 014389 417 AIIDNSP 423 (425)
Q Consensus 417 VIIDDsP 423 (425)
++|+|++
T Consensus 159 ~~iGDs~ 165 (214)
T PRK13288 159 LMVGDNH 165 (214)
T ss_pred EEECCCH
Confidence 9999986
No 15
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.02 E-value=1.4e-05 Score=80.38 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=60.3
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeC-chHHHHHHHHHc-CceEEEEcCCchHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lR-PgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd 377 (425)
...+..+|+||||||+-... -|++| ||+.++|+++.+ .+.++|+|++.+.+|..+++
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~ 181 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMR 181 (301)
T ss_pred cccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
Confidence 35567999999999988631 26679 999999999996 58999999999999999999
Q ss_pred HHCCCCCeeeeEEEcc
Q 014389 378 ILDPDGKLISRRVYRE 393 (425)
Q Consensus 378 ~LDP~~klfs~RL~Re 393 (425)
.++..+ +|...+..+
T Consensus 182 ~lGLd~-YFdvIIs~G 196 (301)
T TIGR01684 182 KVKLDR-YFDIIISGG 196 (301)
T ss_pred HcCCCc-ccCEEEECC
Confidence 999986 776666533
No 16
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.97 E-value=2e-05 Score=79.45 Aligned_cols=73 Identities=19% Similarity=0.225 Sum_probs=61.0
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeC-chHHHHHHHHHc-CceEEEEcCCchHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lR-PgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd 377 (425)
.+.+..+|+||||||+.... -|.+| |++.++|+++.+ .+.++|+|++.+++|..+++
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le 183 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLK 183 (303)
T ss_pred eeeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 45677999999999998632 26779 999999999995 69999999999999999999
Q ss_pred HHCCCCCeeeeEEEccc
Q 014389 378 ILDPDGKLISRRVYRES 394 (425)
Q Consensus 378 ~LDP~~klfs~RL~Res 394 (425)
.++..+ +|...+..++
T Consensus 184 ~lgL~~-yFDvII~~g~ 199 (303)
T PHA03398 184 ETKLEG-YFDIIICGGR 199 (303)
T ss_pred HcCCCc-cccEEEECCC
Confidence 999875 7766665444
No 17
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.94 E-value=1.1e-05 Score=69.43 Aligned_cols=100 Identities=22% Similarity=0.230 Sum_probs=69.2
Q ss_pred EEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCc--------hHHHHHH
Q 014389 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ--------SIYAAQL 375 (425)
Q Consensus 305 tLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~--------~~YAd~I 375 (425)
.|+||+||||++.. .. ..........|++.++|+++. +.+.++|.|.+. ..++..+
T Consensus 2 ~~~~D~dgtL~~~~--~~-------------~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~ 66 (132)
T TIGR01662 2 GVVLDLDGTLTDDV--PY-------------VDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARR 66 (132)
T ss_pred EEEEeCCCceecCC--CC-------------CCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHH
Confidence 68999999999631 00 001123567899999999998 569999999999 8889999
Q ss_pred HHHHCCCCCeeeeEEEcccee-ecCCcEEEeCcCc-CCCCCCEEEEECC
Q 014389 376 LDILDPDGKLISRRVYRESCI-FSDGTYTKDLTVL-GVDLAKVAIIDNS 422 (425)
Q Consensus 376 Ld~LDP~~klfs~RL~ResC~-~~~g~yiKDLs~L-GrDLskVVIIDDs 422 (425)
++.+... +...++..... -....|.+-++.+ +.++++++.|+|+
T Consensus 67 l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~ 112 (132)
T TIGR01662 67 LEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQ 112 (132)
T ss_pred HHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCC
Confidence 9988764 22222332111 0123455566778 5899999999994
No 18
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.92 E-value=3.4e-06 Score=80.01 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=65.8
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+...||+.++|+.+.+ .+.+.|-|++.+.++...++.++-.+ +|+..+..+.....+ ..|.+-+.++|.++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 5678999999999995 69999999999999999999887654 788877765433222 245566778899999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 171 ~igDs~ 176 (224)
T PRK14988 171 FIDDSE 176 (224)
T ss_pred EEcCCH
Confidence 999986
No 19
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.86 E-value=2.5e-05 Score=70.85 Aligned_cols=113 Identities=15% Similarity=0.047 Sum_probs=77.9
Q ss_pred EEEEecccccccccccccCCCCceEEEE---ec--ceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHH
Q 014389 305 TLVLDLDETLVHSTLEYCDDADFTFTVF---FN--MKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI 378 (425)
Q Consensus 305 tLVLDLDeTLVHSs~~~~~~~df~~~v~---~~--~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~ 378 (425)
.+|||+|+||.. +.....+.-|.. .+ ....+.-|.+||++++||+++. ..|-+..+|..-..-|-++|..
T Consensus 2 ~i~~d~d~t~wd----hh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra 77 (164)
T COG4996 2 AIVFDADKTLWD----HHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA 77 (164)
T ss_pred cEEEeCCCcccc----cccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH
Confidence 589999999954 333222211111 00 0233567999999999999999 5799999999999999999999
Q ss_pred HCCCCCeeeeEEEccceeecCCcEEEeCcC------cCCCCCCEEEEECCC
Q 014389 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTV------LGVDLAKVAIIDNSP 423 (425)
Q Consensus 379 LDP~~klfs~RL~ResC~~~~g~yiKDLs~------LGrDLskVVIIDDsP 423 (425)
||... ||.+.+...+-. ..-+..+-|.. +...++++|.+||+.
T Consensus 78 l~~~~-yFhy~ViePhP~-K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~ 126 (164)
T COG4996 78 LDLLQ-YFHYIVIEPHPY-KFLMLSQLLREINTERNQKIKPSEIVYLDDRR 126 (164)
T ss_pred hchhh-hEEEEEecCCCh-hHHHHHHHHHHHHHhhccccCcceEEEEeccc
Confidence 99986 898877765522 11111122222 244678999999984
No 20
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.77 E-value=2.2e-05 Score=78.50 Aligned_cols=106 Identities=17% Similarity=0.129 Sum_probs=71.9
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEecceeeeE-EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHH-
Q 014389 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTV-YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI- 378 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~v-yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~- 378 (425)
.+++||+|||+||..-.... .+..++ +....|++.++|+.+. +.+.+.|.|......|..+++.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e-------------~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~ 68 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGE-------------DGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERR 68 (320)
T ss_pred CeEEEEEcCCCCCCCCEEcc-------------CCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhC
Confidence 36799999999997543111 000111 1224789999999999 5799999999999999999998
Q ss_pred ---HCCCCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 379 ---LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 379 ---LDP~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
+.... +|......- .-....+.+-+..+|.++..+|+|||+|
T Consensus 69 ~~~~~~~~-~f~~~~~~~--~pk~~~i~~~~~~l~i~~~~~vfidD~~ 113 (320)
T TIGR01686 69 KDFILQAE-DFDARSINW--GPKSESLRKIAKKLNLGTDSFLFIDDNP 113 (320)
T ss_pred ccccCcHH-HeeEEEEec--CchHHHHHHHHHHhCCCcCcEEEECCCH
Confidence 55543 454432210 0011233444566899999999999987
No 21
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.73 E-value=4.1e-05 Score=71.26 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=60.6
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecce------eeeEEEeeCchHHHHHHHHH-cCceEEEEcC-CchHHHHH
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMK------EHTVYVKQRPHLKTFLERVA-EMFEVVIFTA-SQSIYAAQ 374 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~------~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTA-s~~~YAd~ 374 (425)
++.+|||||.||-....... ...|...... ..+.-|++-|++.+.|+.+. +..+|.+.|. ..+..|.+
T Consensus 3 PklvvFDLD~TlW~~~~~~~----~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTH----VGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTS----S-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhc----cCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHH
Confidence 46899999999965532222 2222222221 23456899999999999999 5799999994 57899999
Q ss_pred HHHHHCCCC---------CeeeeEEEccceeecCCcEEEeCc----CcCCCCCCEEEEECC
Q 014389 375 LLDILDPDG---------KLISRRVYRESCIFSDGTYTKDLT----VLGVDLAKVAIIDNS 422 (425)
Q Consensus 375 ILd~LDP~~---------klfs~RL~ResC~~~~g~yiKDLs----~LGrDLskVVIIDDs 422 (425)
+|+.|.... .+|.+. ....|...+.+. ..|.+.++++++||.
T Consensus 79 ~L~~l~i~~~~~~~~~~~~~F~~~------eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe 133 (169)
T PF12689_consen 79 LLKLLEIDDADGDGVPLIEYFDYL------EIYPGSKTTHFRRIHRKTGIPYEEMLFFDDE 133 (169)
T ss_dssp HHHHTT-C----------CCECEE------EESSS-HHHHHHHHHHHH---GGGEEEEES-
T ss_pred HHHhcCCCccccccccchhhcchh------heecCchHHHHHHHHHhcCCChhHEEEecCc
Confidence 999998870 134331 122343333333 458899999999995
No 22
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=97.72 E-value=5.6e-06 Score=78.74 Aligned_cols=82 Identities=20% Similarity=0.257 Sum_probs=72.0
Q ss_pred EeeCchHHHHHHHHHcC-ceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeec---CCcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~-YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~---~g~yiKDLs~LGrDLskVV 417 (425)
+...||+.+||+.|.+. .-+.+-|.+.+..++.++..+...+ +|..++++++.... ...|++-+.+||.+++++|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 78999999999999966 9999999999999999999999886 89999987765443 2368888899999999999
Q ss_pred EEECCCC
Q 014389 418 IIDNSPQ 424 (425)
Q Consensus 418 IIDDsP~ 424 (425)
+|+|++.
T Consensus 164 viEDs~~ 170 (221)
T COG0637 164 VVEDSPA 170 (221)
T ss_pred EEecchh
Confidence 9999984
No 23
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.72 E-value=4.6e-06 Score=82.13 Aligned_cols=81 Identities=11% Similarity=0.098 Sum_probs=60.5
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 420 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIID 420 (425)
+...||+.++|++|. +.+.+.|.|++.+.+++.+++.++... +|...+..+........+.+-+..+|.+++++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 566899999999998 569999999999999999999998765 787655433211111122333345688889999999
Q ss_pred CCC
Q 014389 421 NSP 423 (425)
Q Consensus 421 DsP 423 (425)
|++
T Consensus 220 Ds~ 222 (273)
T PRK13225 220 DET 222 (273)
T ss_pred CCH
Confidence 986
No 24
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.70 E-value=2.2e-05 Score=69.66 Aligned_cols=103 Identities=20% Similarity=0.283 Sum_probs=67.9
Q ss_pred EEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCch--------------
Q 014389 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS-------------- 369 (425)
Q Consensus 305 tLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~-------------- 369 (425)
+|+||+||||+...... |. ..+-.+...||+.++|++|. +.|.++|.|++.+
T Consensus 2 ~~~~d~dgtl~~~~~~~-----~~--------~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~ 68 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSD-----YP--------RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAP 68 (147)
T ss_pred eEEEeCCCceeccCCcc-----cC--------CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHH
Confidence 78999999999874211 10 01112467899999999998 6799999999874
Q ss_pred -HHHHHHHHHHCCCCCeeeeEEEc-----cceeec---CCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 370 -IYAAQLLDILDPDGKLISRRVYR-----ESCIFS---DGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 370 -~YAd~ILd~LDP~~klfs~RL~R-----esC~~~---~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
.++..+++.++.. +...++. +..... .+.|.+=+..+|.+++++++|.|++
T Consensus 69 ~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~ 128 (147)
T TIGR01656 69 NGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRL 128 (147)
T ss_pred HHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCH
Confidence 5667777777653 2122222 111111 1234444566788999999999974
No 25
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.60 E-value=5.9e-05 Score=68.74 Aligned_cols=102 Identities=16% Similarity=0.183 Sum_probs=66.4
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCch-------------
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 369 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~------------- 369 (425)
+.|.||+||||+-.. .|. ...--+.+.||+.++|++|+ +.|.++|.|++..
T Consensus 2 ~~~~~D~Dgtl~~~~-------~~~--------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDH-------GYV--------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCC-------CCC--------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 578999999998321 111 01112456799999999999 5699999999885
Q ss_pred --HHHHHHHHHHCCCCCeeeeEEEcc-----------ceeec---CCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 370 --IYAAQLLDILDPDGKLISRRVYRE-----------SCIFS---DGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 370 --~YAd~ILd~LDP~~klfs~RL~Re-----------sC~~~---~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
.|...++..+... |...++.. .|... .+.|.+-++++|.+++++++|+|++
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~ 133 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKL 133 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCH
Confidence 3444555544322 33434322 22221 2345566777899999999999985
No 26
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.59 E-value=0.00012 Score=66.91 Aligned_cols=105 Identities=15% Similarity=0.153 Sum_probs=73.3
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCC---------------
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS--------------- 367 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs--------------- 367 (425)
+.|.||.||||++.... .| . . ...-+++.-||+.++|++|.+ .|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~-----~~--~---~--~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS-----DF--Q---V--DALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCC-----cc--c---c--CCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 47999999999884211 11 0 0 011146778999999999995 6999999996
Q ss_pred chHHHHHHHHHHCCCCCeeeeEEEc-----cceeecC---CcEEEeCcCcCCCCCCEEEEECCC
Q 014389 368 QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 368 ~~~YAd~ILd~LDP~~klfs~RL~R-----esC~~~~---g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
...++..+++.++.. |...++. +.+.... +.+..-++.+|.+++++++|.|++
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~ 130 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRE 130 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 466888888888875 6666653 4443322 233444556788999999999974
No 27
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.53 E-value=1.2e-05 Score=74.53 Aligned_cols=81 Identities=14% Similarity=0.219 Sum_probs=59.2
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceee---cC----------CcEEEeCc
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF---SD----------GTYTKDLT 407 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~---~~----------g~yiKDLs 407 (425)
+..+||+.+||+++.+ .+.++|.|++...++..+++.+.-.. +|...+.-++-.+ .. ..+.+-+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 5689999999999995 69999999999999999999988765 6665543221110 00 11222234
Q ss_pred CcCCCCCCEEEEECCC
Q 014389 408 VLGVDLAKVAIIDNSP 423 (425)
Q Consensus 408 ~LGrDLskVVIIDDsP 423 (425)
.+|.+++++++|.|++
T Consensus 163 ~~~~~~~~~i~iGDs~ 178 (219)
T TIGR00338 163 KEGISPENTVAVGDGA 178 (219)
T ss_pred HcCCCHHHEEEEECCH
Confidence 5688889999999985
No 28
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.47 E-value=0.00016 Score=66.01 Aligned_cols=104 Identities=15% Similarity=0.080 Sum_probs=68.1
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCch------------
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQS------------ 369 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~------------ 369 (425)
.+.|+||+||||+-... .| ..... .+...||+.++|+++++ .|.++|.|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~------~~------~~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD------GY------VKSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCc------cc------cCCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 46899999999965421 01 11111 24578999999999996 599999998863
Q ss_pred ---HHHHHHHHHHCCCCCeeeeEEEccce-----eec---CCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 370 ---IYAAQLLDILDPDGKLISRRVYRESC-----IFS---DGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 370 ---~YAd~ILd~LDP~~klfs~RL~ResC-----~~~---~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
.+...+++.++. +|...++...+ ... ...|.+-+..+|.+++++++|.|++
T Consensus 69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~ 130 (181)
T PRK08942 69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSL 130 (181)
T ss_pred HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCH
Confidence 334444554432 35555554322 111 1245566677899999999999985
No 29
>PLN02940 riboflavin kinase
Probab=97.42 E-value=2.3e-05 Score=80.65 Aligned_cols=81 Identities=11% Similarity=0.105 Sum_probs=66.1
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHH-HHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD-ILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd-~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskV 416 (425)
+...||+.++|++|. +.+.+.|.|++.+.++..+++ .++-. .+|+..+..+++...+ ..|.+-++.+|..++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 567899999999998 569999999999999999887 55554 4899888888765432 35666677889999999
Q ss_pred EEEECCC
Q 014389 417 AIIDNSP 423 (425)
Q Consensus 417 VIIDDsP 423 (425)
++|+|++
T Consensus 171 l~VGDs~ 177 (382)
T PLN02940 171 LVIEDSL 177 (382)
T ss_pred EEEeCCH
Confidence 9999986
No 30
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.36 E-value=0.00017 Score=64.46 Aligned_cols=49 Identities=10% Similarity=0.271 Sum_probs=42.4
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEE
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ 391 (425)
+.++||+.++|+++.+ .+.++|.|++...+++.+++.++... +|...+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~ 120 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYS 120 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEec
Confidence 6899999999999985 59999999999999999999987654 6766664
No 31
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.35 E-value=0.00066 Score=68.19 Aligned_cols=72 Identities=19% Similarity=0.231 Sum_probs=58.8
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEee-CchHHHHHHHHHcCc-eEEEEcCCchHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQ-RPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~l-RPgL~eFLe~Lsq~Y-EIVIfTAs~~~YAd~ILd 377 (425)
-+++-++|+|||+|||-.... +++ -|.+.+.|.++.+.+ -+++|+.|.++||..-++
T Consensus 119 ~~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~ 177 (297)
T PF05152_consen 119 WEPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLK 177 (297)
T ss_pred CCCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHH
Confidence 345669999999999986422 222 388899999999665 899999999999999999
Q ss_pred HHCCCCCeeeeEEEcc
Q 014389 378 ILDPDGKLISRRVYRE 393 (425)
Q Consensus 378 ~LDP~~klfs~RL~Re 393 (425)
.+...+ +|...|.+.
T Consensus 178 ~~~L~~-~Fd~ii~~G 192 (297)
T PF05152_consen 178 ELKLEG-YFDIIICGG 192 (297)
T ss_pred HhCCcc-ccEEEEeCC
Confidence 999885 898888744
No 32
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.31 E-value=0.00045 Score=63.32 Aligned_cols=107 Identities=18% Similarity=0.279 Sum_probs=66.6
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchH-----------
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI----------- 370 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~----------- 370 (425)
++.++||+||||+-..... .| ...... +..+-||+.+.|++|. +.|.++|.|++...
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~----~~------~~~~~~-~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~ 81 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGK----VF------PTSASD-WRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK 81 (166)
T ss_pred CcEEEEeCCCceEecCCCC----cc------cCChHH-eEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence 3578999999998653110 00 000111 1224599999999997 68999999998763
Q ss_pred -HHHHHHHHHCCCCCeeeeEEEccceeec---CCcEEEeCcCcC--CCCCCEEEEECCC
Q 014389 371 -YAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLG--VDLAKVAIIDNSP 423 (425)
Q Consensus 371 -YAd~ILd~LDP~~klfs~RL~ResC~~~---~g~yiKDLs~LG--rDLskVVIIDDsP 423 (425)
++..+++.++.. +...+..+..... .+.+..-+..+| .++++++.|.|++
T Consensus 82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 567778887763 2222332221111 123333345667 7889999999986
No 33
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.25 E-value=0.00014 Score=71.06 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=78.6
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHH
Q 014389 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 301 ~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~L 379 (425)
.++..+++|+||||...... ...+|. ...-....|++.++|+++.+ .+.++|.|+....+++.+++.|
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~--~~~~~~---------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGR--SPYDWT---------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCEEEEECCCcCcCCCCC--Cccchh---------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 45578999999999875321 111111 01124569999999999985 5999999999999999999999
Q ss_pred CCCCCeeeeEEEccc-------eeecC---CcEEEeCcCcCC-CCCCEEEEECCCC
Q 014389 380 DPDGKLISRRVYRES-------CIFSD---GTYTKDLTVLGV-DLAKVAIIDNSPQ 424 (425)
Q Consensus 380 DP~~klfs~RL~Res-------C~~~~---g~yiKDLs~LGr-DLskVVIIDDsP~ 424 (425)
+..+.+|...+..+. ..-.. ..+.+-|..++. +.+.++.|+|++.
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~ 280 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQ 280 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHH
Confidence 998767766655542 11111 122334555677 6789999999874
No 34
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.21 E-value=0.00024 Score=61.34 Aligned_cols=82 Identities=18% Similarity=0.341 Sum_probs=69.1
Q ss_pred EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCE
Q 014389 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (425)
Q Consensus 341 yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskV 416 (425)
.....||+.++|+.++ +.+.++|.|.+.+.+++.+++.+... .+|...++.++....+ ..|.+-+..+|.+++++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 5889999999999999 88999999999999999999999776 4898888876554332 24556666779999999
Q ss_pred EEEECCC
Q 014389 417 AIIDNSP 423 (425)
Q Consensus 417 VIIDDsP 423 (425)
++|||++
T Consensus 154 ~~vgD~~ 160 (176)
T PF13419_consen 154 LFVGDSP 160 (176)
T ss_dssp EEEESSH
T ss_pred EEEeCCH
Confidence 9999986
No 35
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.21 E-value=0.00037 Score=67.97 Aligned_cols=93 Identities=10% Similarity=0.174 Sum_probs=58.5
Q ss_pred CCCceEEEEecccccccccccc-cCCCCceEE--EEecceee--------eEEEeeCchHHHHHHHHH-cCceEEEEcCC
Q 014389 300 GRKSVTLVLDLDETLVHSTLEY-CDDADFTFT--VFFNMKEH--------TVYVKQRPHLKTFLERVA-EMFEVVIFTAS 367 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~-~~~~df~~~--v~~~~~~~--------~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs 367 (425)
.++++.++|||||||++|+-.- .....+... -++.+... .-.....|++.+||+++. +.+.++|.|+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence 4556799999999999997410 000001000 00000000 112344455999999998 46999999998
Q ss_pred ----chHHHHHHHHHHCCCCCeeeeEEEcc
Q 014389 368 ----QSIYAAQLLDILDPDGKLISRRVYRE 393 (425)
Q Consensus 368 ----~~~YAd~ILd~LDP~~klfs~RL~Re 393 (425)
...+++.+++.+...+ +|...+-.+
T Consensus 140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d 168 (237)
T TIGR01672 140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGD 168 (237)
T ss_pred CCCcCHHHHHHHHHHhCCch-heeEEECCC
Confidence 7779999999998865 665444333
No 36
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.12 E-value=0.00033 Score=64.73 Aligned_cols=82 Identities=16% Similarity=0.228 Sum_probs=67.9
Q ss_pred EEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCE
Q 014389 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (425)
Q Consensus 341 yV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskV 416 (425)
++.++||+.+||+++.+ .+.++|.|++...++...++.++... +|...+..+.....+ ..|.+-++++|.+.+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 36789999999999985 59999999999999999999998765 888877766544322 24666678889999999
Q ss_pred EEEECCC
Q 014389 417 AIIDNSP 423 (425)
Q Consensus 417 VIIDDsP 423 (425)
|.|.|++
T Consensus 171 ~~igDs~ 177 (221)
T TIGR02253 171 VMVGDRL 177 (221)
T ss_pred EEECCCh
Confidence 9999987
No 37
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.12 E-value=0.00034 Score=62.06 Aligned_cols=80 Identities=21% Similarity=0.283 Sum_probs=63.4
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+..+||+.+||+++++ .|.++|.|++...+ ..++..++..+ +|...++.+.....+ ..|.+-+..+|.++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 5788999999999985 69999999999999 77776677765 788888765544322 245555677899999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 162 ~vgD~~ 167 (183)
T TIGR01509 162 FVDDSP 167 (183)
T ss_pred EEcCCH
Confidence 999986
No 38
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.10 E-value=9.4e-05 Score=67.73 Aligned_cols=82 Identities=20% Similarity=0.198 Sum_probs=55.1
Q ss_pred EEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEc-cceeec-----CC-cEEEeCcCcCCCC
Q 014389 341 YVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS-----DG-TYTKDLTVLGVDL 413 (425)
Q Consensus 341 yV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~R-esC~~~-----~g-~yiKDLs~LGrDL 413 (425)
.+..+||+.+||+.+.+.+.++|.|++.+.+++.+++.++... +|..++.- +.-... .+ ....=+..++...
T Consensus 66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 3567899999999999669999999999999999999988754 66554432 111110 00 0001122334445
Q ss_pred CCEEEEECCC
Q 014389 414 AKVAIIDNSP 423 (425)
Q Consensus 414 skVVIIDDsP 423 (425)
.+++.|-|++
T Consensus 145 ~~~v~iGDs~ 154 (205)
T PRK13582 145 YRVIAAGDSY 154 (205)
T ss_pred CeEEEEeCCH
Confidence 7899998875
No 39
>PRK06769 hypothetical protein; Validated
Probab=97.10 E-value=0.0004 Score=63.63 Aligned_cols=102 Identities=19% Similarity=0.251 Sum_probs=62.6
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHH-----HHHHHH
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIY-----AAQLLD 377 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~Y-----Ad~ILd 377 (425)
..|+||+||||.-- . + + .+.-.+.+.||+.++|++|.+ .|.++|.|++.... ...+..
T Consensus 5 ~~~~~d~d~~~~~~--~------~---~-----~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~ 68 (173)
T PRK06769 5 QAIFIDRDGTIGGD--T------T---I-----HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQ 68 (173)
T ss_pred cEEEEeCCCcccCC--C------C---C-----CCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHH
Confidence 47999999999421 0 0 0 000124568999999999984 69999999876421 012333
Q ss_pred HHCCCCCeeeeEEE-----ccceeec---CCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 378 ILDPDGKLISRRVY-----RESCIFS---DGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 378 ~LDP~~klfs~RL~-----ResC~~~---~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
.+...+ |...++ .+..... .+.|.+-++.+|.+++++++|+|++
T Consensus 69 ~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~ 120 (173)
T PRK06769 69 ELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRW 120 (173)
T ss_pred HHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence 333333 223332 1111111 2356667778899999999999985
No 40
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.99 E-value=0.0019 Score=57.54 Aligned_cols=84 Identities=23% Similarity=0.236 Sum_probs=60.3
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHH---------
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--------- 373 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd--------- 373 (425)
+.+++||||||++.... .|. .....|.+.+.|+++. +.++|+++|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~-----~y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~ 64 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG-----DYA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH 64 (126)
T ss_pred CEEEEeCCCCcccCCCC-----ccc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence 37899999999764210 110 1346889999999985 78999999999888877
Q ss_pred ---HHHHHHCCCCCeeeeEEEcc-ceeecCCcEEEe
Q 014389 374 ---QLLDILDPDGKLISRRVYRE-SCIFSDGTYTKD 405 (425)
Q Consensus 374 ---~ILd~LDP~~klfs~RL~Re-sC~~~~g~yiKD 405 (425)
.+++.|+.++--+...+.|. -|. ..|.|+.|
T Consensus 65 ~~~~t~~wL~k~~ipYd~l~~~kp~~~-~~~~~~dD 99 (126)
T TIGR01689 65 TLPIIILWLNQHNVPYDEIYVGKPWCG-HDGFYVDD 99 (126)
T ss_pred hHHHHHHHHHHcCCCCceEEeCCCcCC-CCCceecc
Confidence 78888988886666666665 232 34566665
No 41
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=96.99 E-value=0.00031 Score=68.36 Aligned_cols=80 Identities=24% Similarity=0.354 Sum_probs=63.1
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccc---------eeecCCcEEEeCcCcCCC
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------CIFSDGTYTKDLTVLGVD 412 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~Res---------C~~~~g~yiKDLs~LGrD 412 (425)
++.-|-|+.||-.|.+.+ .++||.+.+..|.++|++|.... .|...++.+- |.-....|-|-.+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 677788999999999887 99999999999999999999986 6888877431 111123455555666876
Q ss_pred -CCCEEEEECCC
Q 014389 413 -LAKVAIIDNSP 423 (425)
Q Consensus 413 -LskVVIIDDsP 423 (425)
+.+++++||+.
T Consensus 177 ~p~~t~FfDDS~ 188 (244)
T KOG3109|consen 177 SPRNTYFFDDSE 188 (244)
T ss_pred CcCceEEEcCch
Confidence 99999999985
No 42
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.94 E-value=0.00043 Score=65.51 Aligned_cols=49 Identities=20% Similarity=0.314 Sum_probs=43.3
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEE
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ 391 (425)
+.++||+.+||+++.+.+.++|-|++...+++++++.|+.+. +|..++-
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~ 115 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLE 115 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeE
Confidence 578999999999999878999999999999999999998874 6766554
No 43
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.92 E-value=0.00079 Score=61.96 Aligned_cols=81 Identities=14% Similarity=0.092 Sum_probs=68.0
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCc-CCCCCCEE
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVL-GVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~L-GrDLskVV 417 (425)
+.++||+.++|+++.+.+.++|-|++...+++.+++.+.-.+ +|++.+..+.....+ ..|.+-+.++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 578999999999999779999999999999999999988765 788888766654332 2466667888 99999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 175 ~igD~~ 180 (224)
T TIGR02254 175 MIGDSL 180 (224)
T ss_pred EECCCc
Confidence 999986
No 44
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.90 E-value=0.0017 Score=66.98 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=70.5
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCC-------------
Q 014389 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS------------- 367 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs------------- 367 (425)
+++.|+||-||||+..... .|. ....-.+.++||+.++|+++.+ .|.++|.|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~-----~y~-------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l 68 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPT-----DFQ-------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF 68 (354)
T ss_pred CCcEEEEeCCCCccCCCCc-----ccc-------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence 4679999999999986421 110 1112247889999999999985 6999999994
Q ss_pred --chHHHHHHHHHHCCCCCeeeeEEEc-----cceeecC---CcEEEeCcCcCCCCCCEEEEECCC
Q 014389 368 --QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 368 --~~~YAd~ILd~LDP~~klfs~RL~R-----esC~~~~---g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
...++..+++.+.. +|...++. +.|.... +.+..-+..++.+++++++|-|++
T Consensus 69 ~~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~ 131 (354)
T PRK05446 69 DPPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRE 131 (354)
T ss_pred hhHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCH
Confidence 34566666666554 35555443 3443321 122222345678899999999874
No 45
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.89 E-value=0.0035 Score=61.24 Aligned_cols=94 Identities=11% Similarity=0.167 Sum_probs=58.2
Q ss_pred CCCceEEEEeccccccccccc-ccCCCCceEE--EEecc--------eeeeEEEeeCchHHHHHHHHH-cCceEEEEcCC
Q 014389 300 GRKSVTLVLDLDETLVHSTLE-YCDDADFTFT--VFFNM--------KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS 367 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~-~~~~~df~~~--v~~~~--------~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs 367 (425)
.++|+.++||+|||+++++-- ...+..|.-. -++.. .....+....||+.+||+++. +.++|++-|+.
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR 139 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR 139 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence 456779999999999996421 1111111100 00000 011234666677999999995 78999999994
Q ss_pred ----chHHHHHHHHHHCCC-CCeeeeEEEcc
Q 014389 368 ----QSIYAAQLLDILDPD-GKLISRRVYRE 393 (425)
Q Consensus 368 ----~~~YAd~ILd~LDP~-~klfs~RL~Re 393 (425)
...+++.+++.+... ..+|...+..+
T Consensus 140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd 170 (237)
T PRK11009 140 TATKTETVSKTLADDFHIPADNMNPVIFAGD 170 (237)
T ss_pred CCcccHHHHHHHHHHcCCCcccceeEEEcCC
Confidence 567899999877662 33665444443
No 46
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.84 E-value=0.0009 Score=61.38 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=65.2
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+.++||+.++|+++. +.+.++|.|++.+.+++.+++.++-.+ +|...+..+.....+ ..|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 678999999999998 569999999999999999999988765 787666555432221 235566778899999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 163 ~igDs~ 168 (213)
T TIGR01449 163 YVGDSR 168 (213)
T ss_pred EeCCCH
Confidence 999985
No 47
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.82 E-value=0.00092 Score=64.27 Aligned_cols=81 Identities=16% Similarity=0.228 Sum_probs=68.4
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+.+.||+.++|+++. +.+.++|.|++.+.+++.+++.++..+ ||...+..+.+...+ ..|.+-+..+|.++++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 667899999999997 569999999999999999999998875 898888877654332 256667778899999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|.|++
T Consensus 186 ~vgDs~ 191 (248)
T PLN02770 186 VFEDSV 191 (248)
T ss_pred EEcCCH
Confidence 999986
No 48
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.80 E-value=0.00086 Score=61.29 Aligned_cols=94 Identities=17% Similarity=0.201 Sum_probs=67.0
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCc-hHHHHHHHHH
Q 014389 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ-SIYAAQLLDI 378 (425)
Q Consensus 301 ~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~-~~YAd~ILd~ 378 (425)
..-..||+|+|+||..... ....|++.++|++|.+ .+.++|.|++. ...+..+++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence 4456899999999986421 1346999999999995 59999999998 7888888887
Q ss_pred HCCCCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 379 LDP~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
++... ++ ....-....|.+-+..+|.+.+++++|+|++
T Consensus 81 ~gl~~------~~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~ 118 (170)
T TIGR01668 81 LGIPV------LP-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRL 118 (170)
T ss_pred cCCEE------Ec-CCCCCChHHHHHHHHHcCCCHHHEEEECCcc
Confidence 76431 11 1111112244455667788899999999986
No 49
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=96.76 E-value=0.00059 Score=61.81 Aligned_cols=79 Identities=24% Similarity=0.318 Sum_probs=63.7
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceee-----c--CCcEEEeCcCcCCCCC
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-----S--DGTYTKDLTVLGVDLA 414 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~-----~--~g~yiKDLs~LGrDLs 414 (425)
+...||+.++|++|. +.++|.|++.+.++..+++.++... +|+..+..+.... . ...|.+-+..+|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 456799999999998 6899999999999999999998654 8888777654332 1 2355566677899999
Q ss_pred CEEEEECCC
Q 014389 415 KVAIIDNSP 423 (425)
Q Consensus 415 kVVIIDDsP 423 (425)
++++|+|++
T Consensus 160 ~~l~vgD~~ 168 (184)
T TIGR01993 160 RAIFFDDSA 168 (184)
T ss_pred ceEEEeCCH
Confidence 999999986
No 50
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.76 E-value=0.00098 Score=65.28 Aligned_cols=81 Identities=14% Similarity=0.247 Sum_probs=68.7
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+.++||+.++|+++. +.|.++|.|++.+.++..+++.++..+ ||...+..+.+...+ ..|.+-+.++|.++++++
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 567899999999999 569999999999999999999998765 899888877654332 256677788899999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 187 ~IgDs~ 192 (260)
T PLN03243 187 VFGNSN 192 (260)
T ss_pred EEcCCH
Confidence 999985
No 51
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=96.74 E-value=0.001 Score=62.88 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=61.3
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecCC---cEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~g---~yiKDLs~LGrDLskVV 417 (425)
.+.-||+.+.|++++ +.|.+.|.|+.....++.+++.++... +|...+-.+.....+. .+..-+..+|.+++++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 467899999999999 569999999999999999999999876 7877666333222221 23344456677767899
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
.|=|+.
T Consensus 167 ~VGDs~ 172 (220)
T COG0546 167 MVGDSL 172 (220)
T ss_pred EECCCH
Confidence 887764
No 52
>PRK09449 dUMP phosphatase; Provisional
Probab=96.72 E-value=0.0013 Score=61.15 Aligned_cols=81 Identities=14% Similarity=0.142 Sum_probs=66.4
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCC-CCCCEE
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGV-DLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGr-DLskVV 417 (425)
+...||+.++|+++.+.|.++|.|++.+.+++.+++.++..+ +|...+..+.....+ ..|.+-+..+|. +.++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 567899999999999889999999999999999999988765 788888877654332 355666778885 457899
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 173 ~vgD~~ 178 (224)
T PRK09449 173 MVGDNL 178 (224)
T ss_pred EEcCCc
Confidence 999986
No 53
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.72 E-value=0.0012 Score=60.41 Aligned_cols=81 Identities=16% Similarity=0.256 Sum_probs=65.6
Q ss_pred EeeCchHHHHHHHHHcC-ceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~-YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+...||+.++|+++++. |.++|.|++...++..+++.+.-. .+|...+..++....+ ..|.+=++.+|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 55789999999999974 999999999999999999998765 4788888776543321 245555667899999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 170 ~vgD~~ 175 (198)
T TIGR01428 170 FVASNP 175 (198)
T ss_pred EEeCCH
Confidence 999986
No 54
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.66 E-value=0.0018 Score=59.72 Aligned_cols=82 Identities=16% Similarity=0.151 Sum_probs=66.3
Q ss_pred EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeec---CCcEEEeCcCcCCCCCCE
Q 014389 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKV 416 (425)
Q Consensus 341 yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~---~g~yiKDLs~LGrDLskV 416 (425)
.+...||+.++|+++. +.+.++|.|.+.+.++..+++.++..+ +|...+..+.+... ...|.+-+.++|.+++++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 3677899999999998 579999999999999999999998875 78877776654322 224455566789889999
Q ss_pred EEEECCC
Q 014389 417 AIIDNSP 423 (425)
Q Consensus 417 VIIDDsP 423 (425)
++|+|++
T Consensus 152 l~igD~~ 158 (205)
T TIGR01454 152 VMVGDAV 158 (205)
T ss_pred EEEcCCH
Confidence 9999986
No 55
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.59 E-value=0.0025 Score=68.86 Aligned_cols=109 Identities=12% Similarity=0.182 Sum_probs=70.6
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCch----------
Q 014389 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS---------- 369 (425)
Q Consensus 301 ~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~---------- 369 (425)
.+.+++.||+||||+..... ..|. . .... +..+-||+.+.|++|. +.|.|+|+|+...
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg----~~~~-----~-~~~d-~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSG----KVFP-----K-GPDD-WQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred ccCcEEEEECCCCccccCCC----ccCC-----C-CHHH-eeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 34579999999999975311 0110 0 1111 1224599999999999 5699999999766
Q ss_pred --HHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcC----cCCCCCCEEEEECCC
Q 014389 370 --IYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTV----LGVDLAKVAIIDNSP 423 (425)
Q Consensus 370 --~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~----LGrDLskVVIIDDsP 423 (425)
.++..+++.|+.. |...+..+.|.+.. |.+..-+.. ++.++++.++|-|+.
T Consensus 235 ~~~ki~~iL~~lgip---fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 235 FKAKIEAIVAKLGVP---FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HHHHHHHHHHHcCCc---eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence 5688888888753 66444455554432 333222222 357889999998875
No 56
>PLN02954 phosphoserine phosphatase
Probab=96.49 E-value=0.0011 Score=61.63 Aligned_cols=49 Identities=10% Similarity=0.216 Sum_probs=41.1
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCC-CeeeeEE
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDG-KLISRRV 390 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~-klfs~RL 390 (425)
..++||+.++|+++.+ .+.++|.|++.+.+++.+++.++-.. .+|..++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~ 133 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQI 133 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEE
Confidence 5678999999999984 68999999999999999999987653 4665544
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=96.44 E-value=0.0026 Score=57.24 Aligned_cols=100 Identities=19% Similarity=0.125 Sum_probs=64.7
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCC
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
+.++||+||||+.-... +..+ .+..-++.++|+. -|++|. +.+.++|.|+..+..+..+++.+...
T Consensus 2 ~~~~~D~Dgtl~~~~~~----------~~~~-~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIY----------YTNN-GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEE----------ECCC-CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 46899999999853210 0011 1112234677776 688888 47999999999999999999998865
Q ss_pred CCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 383 GKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 383 ~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
. +|... .-....+.+-+..+|.++++++.|-|++
T Consensus 69 ~-~~~~~------~~k~~~~~~~~~~~~~~~~~~~~vGDs~ 102 (154)
T TIGR01670 69 H-LYQGQ------SNKLIAFSDILEKLALAPENVAYIGDDL 102 (154)
T ss_pred E-EEecc------cchHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 3 44321 0011122233345677888888887764
No 58
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.33 E-value=0.0025 Score=59.51 Aligned_cols=82 Identities=17% Similarity=0.179 Sum_probs=66.7
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+.+.||+.++|+++. +.|.++|.|++.+.+++.+++.+.-.+ +|...+.++.....+ ..|..-+..+|.++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 567899999999998 569999999999999999999988765 788877776543222 245566677899999999
Q ss_pred EEECCCC
Q 014389 418 IIDNSPQ 424 (425)
Q Consensus 418 IIDDsP~ 424 (425)
.|+|++.
T Consensus 170 ~igDs~~ 176 (222)
T PRK10826 170 ALEDSFN 176 (222)
T ss_pred EEcCChh
Confidence 9999863
No 59
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.31 E-value=0.0035 Score=62.33 Aligned_cols=92 Identities=15% Similarity=0.125 Sum_probs=55.7
Q ss_pred CCceEEEEeccccccccccc----ccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHH-
Q 014389 301 RKSVTLVLDLDETLVHSTLE----YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQ- 374 (425)
Q Consensus 301 ~kKltLVLDLDeTLVHSs~~----~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~- 374 (425)
.+|+.+|||+|||+++.+.- ......|.-. ....-........-||+.+||+++. +...++|.|.....+.+.
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~-~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPE-TWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHH-HHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 45789999999999987621 1111111000 0000000113556799999999997 568999999988666664
Q ss_pred --HHHHHCCCCCeeeeEEEcc
Q 014389 375 --LLDILDPDGKLISRRVYRE 393 (425)
Q Consensus 375 --ILd~LDP~~klfs~RL~Re 393 (425)
.++.++.....+.+.++|+
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~ 172 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKK 172 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCC
Confidence 4444444433346677775
No 60
>PRK08238 hypothetical protein; Validated
Probab=96.29 E-value=0.0041 Score=66.44 Aligned_cols=48 Identities=15% Similarity=0.090 Sum_probs=40.4
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEcc
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE 393 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~Re 393 (425)
...||++.++|+++. +.+.++|-|++.+.+++++++.++- |+..+..+
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd 119 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASD 119 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCC
Confidence 357899999999998 6799999999999999999999854 55555544
No 61
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.28 E-value=0.0052 Score=58.78 Aligned_cols=66 Identities=15% Similarity=0.123 Sum_probs=51.5
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHH--HHHHHH
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--QLLDIL 379 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd--~ILd~L 379 (425)
-..++||+||||.+.. ..-||+.++|++|. +.+.++|.|++.+..++ +.++.+
T Consensus 8 ~~~~~~D~dG~l~~~~------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 8 YDVFLLDLWGVIIDGN------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred CCEEEEecccccccCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence 3478999999997742 23799999999999 57999999999998877 778888
Q ss_pred CCCCCeeeeEEEc
Q 014389 380 DPDGKLISRRVYR 392 (425)
Q Consensus 380 DP~~klfs~RL~R 392 (425)
+....+|...+..
T Consensus 64 gl~~~~~~~Ii~s 76 (242)
T TIGR01459 64 GINADLPEMIISS 76 (242)
T ss_pred CCCccccceEEcc
Confidence 7653256655553
No 62
>PRK11587 putative phosphatase; Provisional
Probab=96.28 E-value=0.0051 Score=57.53 Aligned_cols=82 Identities=13% Similarity=0.111 Sum_probs=63.3
Q ss_pred EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCE
Q 014389 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (425)
Q Consensus 341 yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskV 416 (425)
.+.+.||+.++|+++. +.+.++|.|++.+.++..+++.+... +|...+..++....+ ..|.+-+..+|..++++
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~ 158 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQEC 158 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccE
Confidence 3577999999999998 67999999999999988888877652 455555555443222 25667777889999999
Q ss_pred EEEECCCC
Q 014389 417 AIIDNSPQ 424 (425)
Q Consensus 417 VIIDDsP~ 424 (425)
|+|+|++.
T Consensus 159 l~igDs~~ 166 (218)
T PRK11587 159 VVVEDAPA 166 (218)
T ss_pred EEEecchh
Confidence 99999973
No 63
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.26 E-value=0.0042 Score=57.39 Aligned_cols=81 Identities=17% Similarity=0.212 Sum_probs=62.5
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
...+||+.+||+.+.+ .+.++|.|.+...+++.+++.++..+ +|...+..+.....+ ..|.+-+..++.+.++++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 6789999999999994 69999999999999999999998764 676554444322111 124445567788999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 171 ~igD~~ 176 (226)
T PRK13222 171 FVGDSR 176 (226)
T ss_pred EECCCH
Confidence 999985
No 64
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.26 E-value=0.0041 Score=59.38 Aligned_cols=82 Identities=12% Similarity=0.029 Sum_probs=64.6
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCC-CCCCE
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGV-DLAKV 416 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGr-DLskV 416 (425)
+.+.||+.++|+++.+ .+.+.|-|++.+.+++.+++.++..+.+|...+..+.....+ ..|.+-+.++|. +++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence 5778999999999984 699999999999999999999987763346666666543322 255666778887 48999
Q ss_pred EEEECCC
Q 014389 417 AIIDNSP 423 (425)
Q Consensus 417 VIIDDsP 423 (425)
|+|.|++
T Consensus 178 l~IGDs~ 184 (253)
T TIGR01422 178 VKVGDTV 184 (253)
T ss_pred EEECCcH
Confidence 9999987
No 65
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.24 E-value=0.0038 Score=65.02 Aligned_cols=81 Identities=11% Similarity=0.123 Sum_probs=68.8
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+.+.||+.+||+.|. +.+.+.|.|++.+.+++.+++.++..+ ||+..+..+++...+ ..|.+-+..+|.+++++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 467899999999998 569999999999999999999998765 899888887765332 256677788899999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 294 ~IGDS~ 299 (381)
T PLN02575 294 VFGNSN 299 (381)
T ss_pred EEcCCH
Confidence 999985
No 66
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.22 E-value=0.0046 Score=58.58 Aligned_cols=82 Identities=11% Similarity=-0.003 Sum_probs=65.4
Q ss_pred EEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCE
Q 014389 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (425)
Q Consensus 341 yV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskV 416 (425)
++.++||+.++|+++.+ .+.+.|.|++...++..+++.++-.+ +|...+..+.+...+ ..|.+-++.+|.+++++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~ 171 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC 171 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence 36789999999999985 58999999999999999999987765 676665555543221 24566677889999999
Q ss_pred EEEECCC
Q 014389 417 AIIDNSP 423 (425)
Q Consensus 417 VIIDDsP 423 (425)
++|+|++
T Consensus 172 l~IGDs~ 178 (229)
T PRK13226 172 VYVGDDE 178 (229)
T ss_pred EEeCCCH
Confidence 9999986
No 67
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.19 E-value=0.0043 Score=57.29 Aligned_cols=82 Identities=15% Similarity=0.162 Sum_probs=69.9
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEEE
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 418 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVVI 418 (425)
+...|++.++|+.+.+.|.++|.|.|...++...+..+.. ..+|+..++.+.....+ ..|..-+..+|.+++++++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl-~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGL-LDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCC-hhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 6788999999999997799999999999999999999984 45899999988766443 3566667788999999999
Q ss_pred EECCCC
Q 014389 419 IDNSPQ 424 (425)
Q Consensus 419 IDDsP~ 424 (425)
|||++.
T Consensus 177 VgD~~~ 182 (229)
T COG1011 177 VGDSLE 182 (229)
T ss_pred ECCChh
Confidence 999863
No 68
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.18 E-value=0.013 Score=52.99 Aligned_cols=81 Identities=14% Similarity=0.172 Sum_probs=59.1
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccce-eecCCcEE------E------eCc
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESC-IFSDGTYT------K------DLT 407 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC-~~~~g~yi------K------DLs 407 (425)
+.++||+.++|+++. +.+.++|.|++...+++.+++.+.... +|...+..+.. ......+. | -+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 678999999999998 579999999999999999999998664 66666543221 11111111 1 123
Q ss_pred CcCCCCCCEEEEECCC
Q 014389 408 VLGVDLAKVAIIDNSP 423 (425)
Q Consensus 408 ~LGrDLskVVIIDDsP 423 (425)
.+|.+++++++|.|+.
T Consensus 158 ~~~~~~~~~i~iGDs~ 173 (201)
T TIGR01491 158 ELNPSLTETVAVGDSK 173 (201)
T ss_pred HhCCCHHHEEEEcCCH
Confidence 4577889999999985
No 69
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.10 E-value=0.0028 Score=56.73 Aligned_cols=79 Identities=18% Similarity=0.234 Sum_probs=61.7
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+...||+.++|+++.+ .+.++|.|++ .+++.+++.++-.+ +|...+..+.....+ ..|.+-++.+|..++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 5789999999999985 5999999988 78999999887764 788777765443321 234455667788899999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 164 ~IgD~~ 169 (185)
T TIGR02009 164 VFEDAL 169 (185)
T ss_pred EEeCcH
Confidence 999986
No 70
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=96.09 E-value=0.0028 Score=58.47 Aligned_cols=84 Identities=12% Similarity=0.203 Sum_probs=63.3
Q ss_pred EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCE
Q 014389 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (425)
Q Consensus 341 yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskV 416 (425)
+...+||+.++|+.+. +.|.++|.|++.+..+..++.....-..+|...+..+++...+ ..|..-++.+|.+++++
T Consensus 82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 3567999999999998 5699999999998877665544222234788777766655432 25666778889999999
Q ss_pred EEEECCCC
Q 014389 417 AIIDNSPQ 424 (425)
Q Consensus 417 VIIDDsP~ 424 (425)
++|||++.
T Consensus 162 l~vgD~~~ 169 (199)
T PRK09456 162 VFFDDNAD 169 (199)
T ss_pred EEeCCCHH
Confidence 99999863
No 71
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=96.04 E-value=0.0035 Score=56.48 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=64.7
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecCC---cEEEeCcCcCCCCCCEEE
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 418 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~g---~yiKDLs~LGrDLskVVI 418 (425)
+..-|+ .++|+++.+.+.++|.|++.+.+++.+++.+.-.+ ||...+..++....+. .|..-+.++|.+++++|+
T Consensus 87 ~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 445676 48999998779999999999999999999998765 8988888776543322 455666778989999999
Q ss_pred EECCCC
Q 014389 419 IDNSPQ 424 (425)
Q Consensus 419 IDDsP~ 424 (425)
|+|++.
T Consensus 165 igDs~~ 170 (188)
T PRK10725 165 FEDADF 170 (188)
T ss_pred EeccHh
Confidence 999863
No 72
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.83 E-value=0.013 Score=56.01 Aligned_cols=80 Identities=15% Similarity=0.253 Sum_probs=58.7
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEE----Ee------Cc
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYT----KD------LT 407 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yi----KD------Ls 407 (425)
.+++||+.+.++++.+ .+.++|.|+|...++++|.+.|..+. .+..++-.++=.+.. |... |. +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 8899999999999995 59999999999999999999999986 677777655411221 1111 11 12
Q ss_pred CcCCCCCCEEEEECC
Q 014389 408 VLGVDLAKVAIIDNS 422 (425)
Q Consensus 408 ~LGrDLskVVIIDDs 422 (425)
.+|.++++++-+=|+
T Consensus 155 ~~g~~~~~~~a~gDs 169 (212)
T COG0560 155 ELGIPLEETVAYGDS 169 (212)
T ss_pred HcCCCHHHeEEEcCc
Confidence 347777777776554
No 73
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=95.83 E-value=0.0097 Score=54.69 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=62.6
Q ss_pred eCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeec--CCcEEEeCcCcCCCCCCEEEEE
Q 014389 344 QRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS--DGTYTKDLTVLGVDLAKVAIID 420 (425)
Q Consensus 344 lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~--~g~yiKDLs~LGrDLskVVIID 420 (425)
..|+..++|+.+++ .+.++|.|++.+.+++.+++.+.-.. +|...+..+..... ...|.+-+..+|.+++++|+|.
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEe
Confidence 45566999999994 69999999999999999999998764 88877776653321 1244556677899999999999
Q ss_pred CCC
Q 014389 421 NSP 423 (425)
Q Consensus 421 DsP 423 (425)
|++
T Consensus 186 D~~ 188 (197)
T TIGR01548 186 DTV 188 (197)
T ss_pred CCH
Confidence 986
No 74
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=95.82 E-value=0.01 Score=54.87 Aligned_cols=102 Identities=18% Similarity=0.131 Sum_probs=61.3
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHC
Q 014389 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LD 380 (425)
+.+.+++|+||||+........ .......+.. |.+ .=++.+. +.++++|.|......+..+++.+.
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~----------~~~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lg 86 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGN----------NGEELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLG 86 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcC----------CCCEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcC
Confidence 4678999999999986310000 0111111222 221 1233333 679999999999999999999987
Q ss_pred CCCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 381 PDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 381 P~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
... +|. .+.-....+.+-+..+|.++++++.|-|++
T Consensus 87 l~~-~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~ 122 (183)
T PRK09484 87 ITH-LYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDL 122 (183)
T ss_pred Cce-eec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCH
Confidence 653 442 111111222333456688888999998764
No 75
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.82 E-value=0.0087 Score=54.84 Aligned_cols=79 Identities=15% Similarity=0.101 Sum_probs=61.4
Q ss_pred eeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEEE
Q 014389 343 KQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 418 (425)
Q Consensus 343 ~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVVI 418 (425)
...||+.++|++|++ .|.++|.|++...+ ..+++.++-.+ +|...+..+.+...+ ..|.+-++.+|.+++++|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 568999999999995 59999999988764 77888876654 788777765544322 2355667778999999999
Q ss_pred EECCC
Q 014389 419 IDNSP 423 (425)
Q Consensus 419 IDDsP 423 (425)
|+|++
T Consensus 183 IgD~~ 187 (203)
T TIGR02252 183 IGDSL 187 (203)
T ss_pred ECCCc
Confidence 99986
No 76
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=95.81 E-value=0.0083 Score=55.63 Aligned_cols=82 Identities=16% Similarity=0.161 Sum_probs=64.0
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCC-CeeeeEEEccceeec---CCcEEEeCcCcCCC-CCC
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRESCIFS---DGTYTKDLTVLGVD-LAK 415 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~-klfs~RL~ResC~~~---~g~yiKDLs~LGrD-Lsk 415 (425)
+.+.||+.+||++++ +.|.++|.|++...++..+++.++... .+|...+..+.-... ...|.+=+.++|.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 468999999999997 679999999999999999999998652 588777765542211 12344556677876 789
Q ss_pred EEEEECCC
Q 014389 416 VAIIDNSP 423 (425)
Q Consensus 416 VVIIDDsP 423 (425)
+++|+|++
T Consensus 166 ~~~igD~~ 173 (220)
T TIGR03351 166 VAVAGDTP 173 (220)
T ss_pred eEEeCCCH
Confidence 99999986
No 77
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=95.78 E-value=0.0086 Score=58.71 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=63.0
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVV 417 (425)
+..+||+.++|+++. +.+.++|.|.+...++..+++.++-.+ +|...+..+.....+ ..|.+=+..+|.+++++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 567899999999998 579999999999999999999987654 787666655433211 123444566788999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 179 ~IGD~~ 184 (272)
T PRK13223 179 FVGDSR 184 (272)
T ss_pred EECCCH
Confidence 999985
No 78
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.66 E-value=0.014 Score=50.95 Aligned_cols=80 Identities=13% Similarity=0.054 Sum_probs=61.2
Q ss_pred EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeec--CCcEEEeCcCcCCCCCCEE
Q 014389 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS--DGTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 341 yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~--~g~yiKDLs~LGrDLskVV 417 (425)
.....||+.++|+++. +.+.++|.|++.+.++..+++.+ . ..+|...+.+++.... ...|.+-+..+|.+. +++
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 3455699999999997 56999999999999999999986 2 3468777766664311 124555566778888 999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|.|++
T Consensus 139 ~iGDs~ 144 (154)
T TIGR01549 139 HVGDNL 144 (154)
T ss_pred EEeCCH
Confidence 999985
No 79
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=95.61 E-value=0.0027 Score=64.51 Aligned_cols=81 Identities=16% Similarity=0.218 Sum_probs=56.5
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEE-ccceee-------cCC----cEEEe-Cc
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY-RESCIF-------SDG----TYTKD-LT 407 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~-ResC~~-------~~g----~yiKD-Ls 407 (425)
+.++||+.++|+++.+ .+.++|.|.+...+++.+++.|+-.. .+...+- .+.... ..+ ..++. ++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 6789999999999995 59999999999999999999987754 3443332 111100 001 11112 23
Q ss_pred CcCCCCCCEEEEECCC
Q 014389 408 VLGVDLAKVAIIDNSP 423 (425)
Q Consensus 408 ~LGrDLskVVIIDDsP 423 (425)
.+|.+++++|.|-|.+
T Consensus 259 ~lgi~~~qtIaVGDg~ 274 (322)
T PRK11133 259 EYEIPLAQTVAIGDGA 274 (322)
T ss_pred HcCCChhhEEEEECCH
Confidence 5688999999999875
No 80
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=95.56 E-value=0.015 Score=56.17 Aligned_cols=83 Identities=12% Similarity=0.072 Sum_probs=64.2
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCC-CCCE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVD-LAKV 416 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrD-LskV 416 (425)
+.+.||+.++|++|. +.+.++|-|++.+..++.+++.+...+-+|...+..++....+ ..|.+-+..+|.. ++.+
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 567899999999998 5699999999999999999998776653346666666543322 2456667778875 6899
Q ss_pred EEEECCCC
Q 014389 417 AIIDNSPQ 424 (425)
Q Consensus 417 VIIDDsP~ 424 (425)
|+|.|++.
T Consensus 180 l~IGDs~~ 187 (267)
T PRK13478 180 VKVDDTVP 187 (267)
T ss_pred EEEcCcHH
Confidence 99999873
No 81
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.48 E-value=0.052 Score=52.77 Aligned_cols=58 Identities=21% Similarity=0.169 Sum_probs=47.7
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCC
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP 381 (425)
.+.+++||||||+.... ...|...+.|+++.+ .+.++|.|......+..+++.++.
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 46899999999997521 135778999999995 599999999999999999999876
Q ss_pred CC
Q 014389 382 DG 383 (425)
Q Consensus 382 ~~ 383 (425)
..
T Consensus 61 ~~ 62 (273)
T PRK00192 61 ED 62 (273)
T ss_pred CC
Confidence 53
No 82
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=95.42 E-value=0.0059 Score=56.39 Aligned_cols=82 Identities=20% Similarity=0.118 Sum_probs=57.8
Q ss_pred EEeeCchHHHHHHHHHc-CceEEEEcCCchHH--HHHHHHHHCCCCCeeeeEEEccceeec---CCcEEEeCcCcCCCCC
Q 014389 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIY--AAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLA 414 (425)
Q Consensus 341 yV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~Y--Ad~ILd~LDP~~klfs~RL~ResC~~~---~g~yiKDLs~LGrDLs 414 (425)
.+.+.||+.++|++|.+ .|.++|.|++...+ +...+..++.. .+|...+..+..... ...|.+-++++|.+++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 36678999999999985 69999999987654 32223223322 468777765544322 2356666778899999
Q ss_pred CEEEEECCC
Q 014389 415 KVAIIDNSP 423 (425)
Q Consensus 415 kVVIIDDsP 423 (425)
++++|||++
T Consensus 171 ~~l~i~D~~ 179 (211)
T TIGR02247 171 ECVFLDDLG 179 (211)
T ss_pred HeEEEcCCH
Confidence 999999986
No 83
>PHA02597 30.2 hypothetical protein; Provisional
Probab=95.33 E-value=0.0078 Score=55.10 Aligned_cols=80 Identities=14% Similarity=0.108 Sum_probs=53.8
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCC---CeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEE
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG---KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 418 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~---klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVI 418 (425)
+...||+.++|++|.+.+.+++-|++.......+++.+...+ .+|++.+..+...-....|.+-++.+| ++.+|+
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~ 150 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF 150 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence 668999999999999878887777776666555666664432 245555555443222223344455667 678999
Q ss_pred EECCC
Q 014389 419 IDNSP 423 (425)
Q Consensus 419 IDDsP 423 (425)
|||++
T Consensus 151 vgDs~ 155 (197)
T PHA02597 151 VDDLA 155 (197)
T ss_pred eCCCH
Confidence 99986
No 84
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=95.29 E-value=0.0067 Score=56.41 Aligned_cols=80 Identities=8% Similarity=0.057 Sum_probs=61.7
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeee-eEEEccceeec---CCcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLIS-RRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs-~RL~ResC~~~---~g~yiKDLs~LGrDLskVV 417 (425)
+...||+.++|+.+. +.++|.|++.+.+++.+++.++... +|. ..+..++.... ...|.+-+.++|..++++|
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 567899999999994 8999999999999999999887765 675 34444433221 1245566777898999999
Q ss_pred EEECCCC
Q 014389 418 IIDNSPQ 424 (425)
Q Consensus 418 IIDDsP~ 424 (425)
+|+|++.
T Consensus 164 ~igDs~~ 170 (221)
T PRK10563 164 LVDDSSA 170 (221)
T ss_pred EEeCcHh
Confidence 9999873
No 85
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.21 E-value=0.018 Score=56.98 Aligned_cols=82 Identities=13% Similarity=0.209 Sum_probs=59.4
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeee--EEEccceeecC---CcEEEeCcCcCCCCCC
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISR--RVYRESCIFSD---GTYTKDLTVLGVDLAK 415 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~--RL~ResC~~~~---g~yiKDLs~LGrDLsk 415 (425)
+.+.||+.+||+++. +.+.++|.|++...++..+++.+.-.+ ++.. .+..+.+...+ ..|.+-+..+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 478999999999998 569999999999999999998773221 3332 12344332211 2455566778999999
Q ss_pred EEEEECCCC
Q 014389 416 VAIIDNSPQ 424 (425)
Q Consensus 416 VVIIDDsP~ 424 (425)
+|+|+|++.
T Consensus 222 ~l~IGDs~~ 230 (286)
T PLN02779 222 CVVVEDSVI 230 (286)
T ss_pred EEEEeCCHH
Confidence 999999863
No 86
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.17 E-value=0.049 Score=49.85 Aligned_cols=54 Identities=28% Similarity=0.284 Sum_probs=45.2
Q ss_pred EEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCC
Q 014389 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 306 LVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
|++||||||+++... .-|...+.|+++. +...++|.|.-....+.+++..+.-.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 689999999996421 3578889999888 78999999999999999999977644
No 87
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.15 E-value=0.012 Score=52.59 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=59.0
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeec---CCcEEEeCcCcCCCCCCEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~---~g~yiKDLs~LGrDLskVV 417 (425)
..+.||+.++|++|. +.+.+.|-|.+. .+..+++.+.-.+ +|...+..++-... ...|.+-+..+|.+++++|
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 357899999999998 569999999764 4677888887764 78877765432211 1245566777888999999
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
+|+|++
T Consensus 163 ~vgD~~ 168 (185)
T TIGR01990 163 GIEDAQ 168 (185)
T ss_pred EEecCH
Confidence 999986
No 88
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.12 E-value=0.066 Score=51.34 Aligned_cols=58 Identities=31% Similarity=0.339 Sum_probs=50.9
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCC
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP 381 (425)
.+.|++||||||+.+... .+|...+.|+++. +...++|.|......+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKT-----------------------ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred eeEEEEcCCCCccCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 568999999999987421 5889999999886 7899999999999999999999998
Q ss_pred CC
Q 014389 382 DG 383 (425)
Q Consensus 382 ~~ 383 (425)
.+
T Consensus 60 ~~ 61 (264)
T COG0561 60 DG 61 (264)
T ss_pred Cc
Confidence 86
No 89
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=94.82 E-value=0.019 Score=55.37 Aligned_cols=82 Identities=12% Similarity=0.082 Sum_probs=59.9
Q ss_pred EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHC---CCCCeeeeEEEcccee-ecCCcEEEeCcCcCCCCCC
Q 014389 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCI-FSDGTYTKDLTVLGVDLAK 415 (425)
Q Consensus 341 yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LD---P~~klfs~RL~ResC~-~~~g~yiKDLs~LGrDLsk 415 (425)
...+.||+.++|+++. +.+.++|+|++...+...+++.++ -. .+|+..+....+. -....|.+-+..+|.++++
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~-~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT-PYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh-hhcceEEEeCcccCCCHHHHHHHHHHhCcChhH
Confidence 3567899999999998 579999999999999999888753 22 2455433211111 0123566777888999999
Q ss_pred EEEEECCC
Q 014389 416 VAIIDNSP 423 (425)
Q Consensus 416 VVIIDDsP 423 (425)
+++|+|++
T Consensus 172 ~lfVgDs~ 179 (220)
T TIGR01691 172 ILFLSDII 179 (220)
T ss_pred EEEEeCCH
Confidence 99999985
No 90
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=94.69 E-value=0.072 Score=50.07 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=54.6
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEE-E-ccceeecC------------C-cEEEe
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV-Y-RESCIFSD------------G-TYTKD 405 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL-~-ResC~~~~------------g-~yiKD 405 (425)
+.+|||+.+||+++. +.+.++|.|++.+.|++.+++.+-+...++...+ + .+...... | .+.+-
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 688999999999998 5699999999999999999998722222332222 1 11111000 0 11233
Q ss_pred CcCcCCCCCCEEEEECCC
Q 014389 406 LTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 406 Ls~LGrDLskVVIIDDsP 423 (425)
+..++....++|.|-|++
T Consensus 153 l~~~~~~~~~~i~iGDs~ 170 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSI 170 (219)
T ss_pred HHHhccCCCCEEEEeCCH
Confidence 345567778999999975
No 91
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=94.53 E-value=0.16 Score=48.62 Aligned_cols=53 Identities=19% Similarity=0.256 Sum_probs=43.2
Q ss_pred EEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCC
Q 014389 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 306 LVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
+++||||||++... .-|...++|+++.+ ...+++.|......+..+++.|...
T Consensus 2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 78999999998421 13568999999995 5999999999988888888888754
No 92
>PLN02811 hydrolase
Probab=94.50 E-value=0.02 Score=53.73 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=58.7
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHH-HHHHHCCCCCeeeeEEEcc--ceeec---CCcEEEeCcCcC---C
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQ-LLDILDPDGKLISRRVYRE--SCIFS---DGTYTKDLTVLG---V 411 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~-ILd~LDP~~klfs~RL~Re--sC~~~---~g~yiKDLs~LG---r 411 (425)
+.+.||+.++|+.|++ .|.++|-|++.+.+... +++..... .+|...+..+ .+... ...|.+=+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 4568999999999984 69999999998876554 33332222 3788888777 55432 235555566665 8
Q ss_pred CCCCEEEEECCCC
Q 014389 412 DLAKVAIIDNSPQ 424 (425)
Q Consensus 412 DLskVVIIDDsP~ 424 (425)
.++++|+|+|++.
T Consensus 156 ~~~~~v~IgDs~~ 168 (220)
T PLN02811 156 DPGKVLVFEDAPS 168 (220)
T ss_pred CccceEEEeccHh
Confidence 8899999999863
No 93
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.47 E-value=0.049 Score=49.84 Aligned_cols=50 Identities=24% Similarity=0.315 Sum_probs=33.5
Q ss_pred eEEEEeccccccccccccc---CCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCC
Q 014389 304 VTLVLDLDETLVHSTLEYC---DDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS 367 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~---~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs 367 (425)
+.+.||||||||....... ...| +..+-|++.+-|+++. +.|.|||+|.-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D--------------~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDD--------------WKFFPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCG--------------GEEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHH--------------hhhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence 3689999999999853211 1111 2335678999999999 57999999975
No 94
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=94.35 E-value=0.034 Score=58.38 Aligned_cols=79 Identities=13% Similarity=0.165 Sum_probs=60.4
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceee--cCCcEEEeCcCcCCCCCCEEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF--SDGTYTKDLTVLGVDLAKVAI 418 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~--~~g~yiKDLs~LGrDLskVVI 418 (425)
+.++||+.++|+++. +.+.+.|.|++.+.++..+++.++-.. ||...+..+.... ....|.+-+..+ +++++|+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence 567899999999998 569999999999999999999998765 7888777654321 112333334444 3588999
Q ss_pred EECCC
Q 014389 419 IDNSP 423 (425)
Q Consensus 419 IDDsP 423 (425)
|.|++
T Consensus 406 VGDs~ 410 (459)
T PRK06698 406 VGDRL 410 (459)
T ss_pred EeCCH
Confidence 99986
No 95
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.30 E-value=0.083 Score=44.75 Aligned_cols=50 Identities=24% Similarity=0.267 Sum_probs=36.2
Q ss_pred EEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHH
Q 014389 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 306 LVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~L 379 (425)
++||+||||.+.. ..=||+.+||+++.+ ...+++.|++...-...++++|
T Consensus 1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 5899999998742 124999999999995 5999999999854444444444
No 96
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=94.28 E-value=0.0071 Score=54.02 Aligned_cols=75 Identities=13% Similarity=0.132 Sum_probs=60.3
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEEE
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 418 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVVI 418 (425)
+..+||+.++|++ ++|.|++.+.++..+++.+.... +|...+..+.....+ ..|.+-++++|.+++++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 5679999999994 78999999999999999987654 788777666543322 2566777888999999999
Q ss_pred EECCC
Q 014389 419 IDNSP 423 (425)
Q Consensus 419 IDDsP 423 (425)
|+|++
T Consensus 162 vgD~~ 166 (175)
T TIGR01493 162 VAAHQ 166 (175)
T ss_pred EecCh
Confidence 99985
No 97
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.27 E-value=0.14 Score=49.67 Aligned_cols=59 Identities=19% Similarity=0.255 Sum_probs=46.3
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHH
Q 014389 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 301 ~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~L 379 (425)
+.++.+++||||||++... ..-|-..+-|+++. +...++|.|.-....+..+++.|
T Consensus 5 ~~~~lI~~DlDGTLL~~~~-----------------------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHT-----------------------YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred CCCeEEEEeCccCCcCCCC-----------------------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 4567899999999998521 01345667788888 56999999999999999999998
Q ss_pred CCC
Q 014389 380 DPD 382 (425)
Q Consensus 380 DP~ 382 (425)
+..
T Consensus 62 ~~~ 64 (271)
T PRK03669 62 GLQ 64 (271)
T ss_pred CCC
Confidence 764
No 98
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=94.23 E-value=0.14 Score=47.70 Aligned_cols=57 Identities=16% Similarity=0.229 Sum_probs=46.9
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCC
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
+.+++||||||+.... ...|...+-|+++.+ .+.++|.|......+.++++.|+..
T Consensus 2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 4789999999986310 246788888999984 5999999999999999999999876
Q ss_pred C
Q 014389 383 G 383 (425)
Q Consensus 383 ~ 383 (425)
+
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 99
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=94.14 E-value=0.14 Score=49.12 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=45.3
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCC
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP 381 (425)
.+.+++||||||++... .+-|...+-|+++. +...++|.|.-....+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 46889999999998521 13566778888888 4589999999999999999988875
Q ss_pred C
Q 014389 382 D 382 (425)
Q Consensus 382 ~ 382 (425)
.
T Consensus 60 ~ 60 (270)
T PRK10513 60 E 60 (270)
T ss_pred C
Confidence 4
No 100
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=93.95 E-value=0.089 Score=52.87 Aligned_cols=83 Identities=18% Similarity=0.319 Sum_probs=57.2
Q ss_pred EEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCC---CCCeeeeEEEc-cceeec--CC----cEEEe--C-
Q 014389 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP---DGKLISRRVYR-ESCIFS--DG----TYTKD--L- 406 (425)
Q Consensus 341 yV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP---~~klfs~RL~R-esC~~~--~g----~yiKD--L- 406 (425)
-+.+|||+.+||+++.+ ...++|+|+|...+++.+++.+.- ....++.++-- +.-... .+ .+.|. +
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 37889999999999985 599999999999999999997553 33455666643 221111 11 12221 1
Q ss_pred ----cCcC--CCCCCEEEEECCC
Q 014389 407 ----TVLG--VDLAKVAIIDNSP 423 (425)
Q Consensus 407 ----s~LG--rDLskVVIIDDsP 423 (425)
..++ .+.+++|+|-|+.
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~ 221 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQ 221 (277)
T ss_pred HHHHHHhCccCCcceEEEECcCh
Confidence 1235 6778999999875
No 101
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=93.94 E-value=0.054 Score=63.08 Aligned_cols=80 Identities=11% Similarity=0.146 Sum_probs=67.6
Q ss_pred eCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEEEE
Q 014389 344 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAII 419 (425)
Q Consensus 344 lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVVII 419 (425)
..||+.+||++|. +.|.++|.|++.+.+++.+++.+.-...+|...+..+.+...+ ..|.+-++.+|.+++++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 5899999999998 5699999999999999999999887545788888877665432 35667778899999999999
Q ss_pred ECCC
Q 014389 420 DNSP 423 (425)
Q Consensus 420 DDsP 423 (425)
+|++
T Consensus 242 gDs~ 245 (1057)
T PLN02919 242 EDAL 245 (1057)
T ss_pred cCCH
Confidence 9986
No 102
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=93.89 E-value=0.19 Score=47.99 Aligned_cols=57 Identities=25% Similarity=0.305 Sum_probs=34.4
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCC
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP 381 (425)
.+.+++||||||+..... +.|...+-|+++. +...++|.|.-....+..+++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKT-----------------------ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 358999999999975311 2344455555555 3456666666655555555555544
Q ss_pred C
Q 014389 382 D 382 (425)
Q Consensus 382 ~ 382 (425)
.
T Consensus 60 ~ 60 (272)
T PRK10530 60 D 60 (272)
T ss_pred C
Confidence 3
No 103
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=93.86 E-value=0.088 Score=49.39 Aligned_cols=47 Identities=11% Similarity=0.241 Sum_probs=40.2
Q ss_pred EEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeee
Q 014389 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLIS 387 (425)
Q Consensus 341 yV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs 387 (425)
.+.+|||+.+||+++.+ .+.++|.|++.+.|++++++.+.+...++.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~ 115 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYC 115 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEe
Confidence 36899999999999996 599999999999999999999865444444
No 104
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=93.70 E-value=0.25 Score=46.02 Aligned_cols=57 Identities=12% Similarity=0.222 Sum_probs=45.6
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCC
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
+.+++||||||+.... .+.|...+-|+++. +...++|.|.-....+.++++.|...
T Consensus 4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 4 KAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred eEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 5889999999996421 14577888888888 45899999999999999999888765
Q ss_pred C
Q 014389 383 G 383 (425)
Q Consensus 383 ~ 383 (425)
.
T Consensus 61 ~ 61 (230)
T PRK01158 61 G 61 (230)
T ss_pred C
Confidence 4
No 105
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=93.68 E-value=0.18 Score=48.13 Aligned_cols=54 Identities=26% Similarity=0.333 Sum_probs=40.8
Q ss_pred EEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCC
Q 014389 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 306 LVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
+++||||||++... ...|...+.|+++. +...++|.|......+..+++.+...
T Consensus 2 i~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 2 IFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred EEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 78999999998521 13466777788877 45888888888888888888777654
No 106
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=93.53 E-value=0.21 Score=46.53 Aligned_cols=54 Identities=24% Similarity=0.256 Sum_probs=43.5
Q ss_pred EEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCC
Q 014389 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 306 LVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
+++||||||+++... ..|...+.|+++.+ ...++|.|......+..+++.|...
T Consensus 2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999985310 12337899999885 5899999999999999999998754
No 107
>PTZ00445 p36-lilke protein; Provisional
Probab=93.40 E-value=0.033 Score=54.22 Aligned_cols=60 Identities=17% Similarity=0.196 Sum_probs=43.4
Q ss_pred CCCceEEEEeccccccc--cc--ccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHH
Q 014389 300 GRKSVTLVLDLDETLVH--ST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIY 371 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVH--Ss--~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~Y 371 (425)
..+-+.+++|||.|||- |- |++. .....+.-..||.+..++++|.+ .+.|+|-|.+.+..
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~------------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYIDPD------------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred HcCCeEEEecchhhhhhhhcccccCCC------------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 45677999999999976 31 1111 01112344579999999999985 79999999998855
No 108
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.40 E-value=0.11 Score=48.59 Aligned_cols=95 Identities=20% Similarity=0.309 Sum_probs=62.5
Q ss_pred cCCCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCc-e--EEEEcCCc------
Q 014389 298 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF-E--VVIFTASQ------ 368 (425)
Q Consensus 298 ~~~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~Y-E--IVIfTAs~------ 368 (425)
....+-+.||||+|+||+.-.. -..-|.+.+.++++.+.| . |+|++++.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~ 93 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDP 93 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCc
Confidence 4456778999999999976321 224688899999999765 3 99999984
Q ss_pred -hHHHHHHHHHHCCCCCeeeeEEEccceeecCCcEEEeCcCcC-----CCCCCEEEEECC
Q 014389 369 -SIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLG-----VDLAKVAIIDNS 422 (425)
Q Consensus 369 -~~YAd~ILd~LDP~~klfs~RL~ResC~~~~g~yiKDLs~LG-----rDLskVVIIDDs 422 (425)
..-|+.+-+.|... .+.|+--.. |.+-+-++.++ ..++++++|-|+
T Consensus 94 ~~~~a~~~~~~lgIp--vl~h~~kKP------~~~~~i~~~~~~~~~~~~p~eiavIGDr 145 (168)
T PF09419_consen 94 DGERAEALEKALGIP--VLRHRAKKP------GCFREILKYFKCQKVVTSPSEIAVIGDR 145 (168)
T ss_pred cHHHHHHHHHhhCCc--EEEeCCCCC------ccHHHHHHHHhhccCCCCchhEEEEcch
Confidence 67788888888743 233332222 22222222222 357889998886
No 109
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=93.28 E-value=0.24 Score=47.80 Aligned_cols=56 Identities=18% Similarity=0.202 Sum_probs=37.3
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCC
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
+.+++||||||+.... .+-|...+-|+++. +...++|.|.-....+.++++.|+..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 5789999999997531 12445556666666 34667777777666666666666554
No 110
>PRK10976 putative hydrolase; Provisional
Probab=93.25 E-value=0.25 Score=47.38 Aligned_cols=55 Identities=24% Similarity=0.248 Sum_probs=33.0
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCC
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP 381 (425)
+.+++||||||++.... +-|...+-|+++. +...++|.|.-....+.++++.|+.
T Consensus 3 kli~~DlDGTLl~~~~~-----------------------is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 58 (266)
T PRK10976 3 QVVASDLDGTLLSPDHT-----------------------LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEI 58 (266)
T ss_pred eEEEEeCCCCCcCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 58999999999986311 1334445555555 3455666665555555555555544
No 111
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=93.02 E-value=0.29 Score=44.60 Aligned_cols=60 Identities=15% Similarity=0.222 Sum_probs=41.4
Q ss_pred EEEecccccccccc-cccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHH---HHHHH
Q 014389 306 LVLDLDETLVHSTL-EYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA---QLLDI 378 (425)
Q Consensus 306 LVLDLDeTLVHSs~-~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd---~ILd~ 378 (425)
+++|+||||+.+.. .+.. . ..+.. +..|++.++++++. +.|.+++.|+.....+. +.+..
T Consensus 2 VisDIDGTL~~sd~~~~~~------~----~~~~~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 2 VISDIDGTITKSDVLGHVV------P----IIGKD---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred EEEecCCCCcccccccccc------c----ccccC---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 78999999998741 1110 0 00111 23799999999999 56999999999877775 55555
No 112
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=92.98 E-value=0.017 Score=56.19 Aligned_cols=83 Identities=19% Similarity=0.153 Sum_probs=64.3
Q ss_pred EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHC-CCCCeeeeEEE--ccceeec---CCcEEEeCcCcCCCC
Q 014389 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD-PDGKLISRRVY--RESCIFS---DGTYTKDLTVLGVDL 413 (425)
Q Consensus 341 yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LD-P~~klfs~RL~--ResC~~~---~g~yiKDLs~LGrDL 413 (425)
.+++-||+..++..|. ..--+.++|.+.+..++.-++.+. +. ..|++.++ -..+... ...|++-+++||..+
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~-~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~ 168 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIF-KNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPP 168 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHH-HhcCCCeecCCccccCCCCCchHHHHHHHhcCCCC
Confidence 4888999999999999 568999999999999888887765 33 35777666 2222211 236788888999888
Q ss_pred -CCEEEEECCCC
Q 014389 414 -AKVAIIDNSPQ 424 (425)
Q Consensus 414 -skVVIIDDsP~ 424 (425)
+++++++|+|.
T Consensus 169 ~~k~lVfeds~~ 180 (222)
T KOG2914|consen 169 PSKCLVFEDSPV 180 (222)
T ss_pred ccceEEECCCHH
Confidence 99999999985
No 113
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=92.83 E-value=0.31 Score=46.76 Aligned_cols=54 Identities=26% Similarity=0.227 Sum_probs=43.4
Q ss_pred EEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCC
Q 014389 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 306 LVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
+++||||||++... ...+...++|+++.+ ...++|.|.-....+..+++.++..
T Consensus 2 i~~DlDGTll~~~~-----------------------~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 2 IFTDLDGTLLDPHG-----------------------YDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred EEEcCCCCCcCCCC-----------------------cCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 78999999998631 013457899999995 5899999999999999999998753
No 114
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=92.75 E-value=0.18 Score=47.68 Aligned_cols=67 Identities=24% Similarity=0.365 Sum_probs=53.9
Q ss_pred CCCccCCCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHH
Q 014389 294 SPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYA 372 (425)
Q Consensus 294 ~P~~~~~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YA 372 (425)
.|.....++.+.+++|||+|||- |+.. ..-|.+++.+..+.. .-.++|.++..+.-+
T Consensus 19 ~~~~L~~~Gikgvi~DlDNTLv~--wd~~--------------------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV 76 (175)
T COG2179 19 TPDILKAHGIKGVILDLDNTLVP--WDNP--------------------DATPELRAWLAELKEAGIKVVVVSNNKESRV 76 (175)
T ss_pred CHHHHHHcCCcEEEEeccCceec--ccCC--------------------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHH
Confidence 34445567888999999999986 3321 125889999999994 599999999999999
Q ss_pred HHHHHHHCCC
Q 014389 373 AQLLDILDPD 382 (425)
Q Consensus 373 d~ILd~LDP~ 382 (425)
..++..||-.
T Consensus 77 ~~~~~~l~v~ 86 (175)
T COG2179 77 ARAAEKLGVP 86 (175)
T ss_pred HhhhhhcCCc
Confidence 9999999875
No 115
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=92.65 E-value=0.31 Score=45.11 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=40.4
Q ss_pred EEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCC
Q 014389 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 306 LVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP 381 (425)
+++||||||+++.. .+.|...+-|+++. +...+++.|......+.++++.|..
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 58999999998631 13456667778777 4588999998888888888888874
No 116
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=92.48 E-value=0.17 Score=47.00 Aligned_cols=101 Identities=13% Similarity=0.143 Sum_probs=63.9
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceee-eEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCC
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEH-TVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~-~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP 381 (425)
-+.+|+|.||+|-.-+. ++...+. ...+..|-+.--.+-+ .+.+.+.|.|.....+++.+++.+.-
T Consensus 7 i~~~v~d~dGv~tdg~~------------~~~~~g~~~~~~~~~D~~~~~~L~-~~Gi~laIiT~k~~~~~~~~l~~lgi 73 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRI------------VINDEGIESRNFDIKDGMGVIVLQ-LCGIDVAIITSKKSGAVRHRAEELKI 73 (169)
T ss_pred CeEEEEeCceeeECCeE------------EEcCCCcEEEEEecchHHHHHHHH-HCCCEEEEEECCCcHHHHHHHHHCCC
Confidence 56899999999976531 2222111 2334455554432211 36799999999999999999999977
Q ss_pred CCCeeeeEEEccceeecCCcEEEeCcCcCCCCCCEEEEECCC
Q 014389 382 DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 382 ~~klfs~RL~ResC~~~~g~yiKDLs~LGrDLskVVIIDDsP 423 (425)
.. +|... . -....+..-+..+|.++++++.|-|++
T Consensus 74 ~~-~f~~~--k----pkp~~~~~~~~~l~~~~~ev~~iGD~~ 108 (169)
T TIGR02726 74 KR-FHEGI--K----KKTEPYAQMLEEMNISDAEVCYVGDDL 108 (169)
T ss_pred cE-EEecC--C----CCHHHHHHHHHHcCcCHHHEEEECCCH
Confidence 63 55421 0 001122233455688888999998875
No 117
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.01 E-value=0.26 Score=49.65 Aligned_cols=53 Identities=15% Similarity=0.232 Sum_probs=41.4
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-----CceEEEEcCCc----hHHHHH
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-----MFEVVIFTASQ----SIYAAQ 374 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-----~YEIVIfTAs~----~~YAd~ 374 (425)
+.++||+||||+++.. .-|++.+||+.+.. ...++++|+.. +.+|+.
T Consensus 1 ~~~ifD~DGvL~~g~~------------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGKK------------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCcc------------------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 3689999999998731 26899999999996 78899999774 567777
Q ss_pred HHHHHC
Q 014389 375 LLDILD 380 (425)
Q Consensus 375 ILd~LD 380 (425)
+.+.+.
T Consensus 57 l~~~lG 62 (321)
T TIGR01456 57 ISSLLG 62 (321)
T ss_pred HHHHcC
Confidence 756554
No 118
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=92.00 E-value=0.15 Score=48.29 Aligned_cols=106 Identities=20% Similarity=0.301 Sum_probs=70.6
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCC------------ch
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS------------QS 369 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs------------~~ 369 (425)
.+.|+||.||||+--.- +|. .... -..+.||+.+=|..+. ..|.+||+|.- -.
T Consensus 5 ~k~lflDRDGtin~d~~------~yv-----~~~~---~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKG------DYV-----DSLD---DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCC------ccc-----CcHH---HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 56999999999965311 111 0000 1456899999999997 56999999982 12
Q ss_pred HHHHHHHHHHCCCCCeeeeEEEccc-----eeec---CCcEEEeCcCcCCCCCCEEEEECC
Q 014389 370 IYAAQLLDILDPDGKLISRRVYRES-----CIFS---DGTYTKDLTVLGVDLAKVAIIDNS 422 (425)
Q Consensus 370 ~YAd~ILd~LDP~~klfs~RL~Res-----C~~~---~g~yiKDLs~LGrDLskVVIIDDs 422 (425)
.+-+.+++.|--.+--|..+++..| |.+. .|.+..=++..+.|+++.++|=|+
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~ 131 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDR 131 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCc
Confidence 3344466667666767899998432 5543 245555555667888888888776
No 119
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.36 E-value=0.44 Score=43.72 Aligned_cols=53 Identities=32% Similarity=0.390 Sum_probs=42.9
Q ss_pred EEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcC-ceEEEEcCCchHHHHHHHHHHC
Q 014389 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD 380 (425)
Q Consensus 306 LVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~-YEIVIfTAs~~~YAd~ILd~LD 380 (425)
|++|+||||+.... ....|.+.+.|+++.+. ..++|.|.....++..+++.++
T Consensus 2 i~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 2 LFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 78999999997420 12358899999999965 8999999999999999998753
No 120
>PRK10444 UMP phosphatase; Provisional
Probab=91.26 E-value=0.33 Score=47.41 Aligned_cols=54 Identities=22% Similarity=0.369 Sum_probs=42.7
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCC
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP 381 (425)
..+++||||||++.. ..=||..+||+++.+ ...+++.|.....-+..+++.|..
T Consensus 2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~ 56 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT 56 (248)
T ss_pred cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 378999999998862 125899999999994 689999999888777777776643
No 121
>PTZ00174 phosphomannomutase; Provisional
Probab=90.61 E-value=0.66 Score=44.68 Aligned_cols=51 Identities=20% Similarity=0.251 Sum_probs=35.4
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHH
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLL 376 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~IL 376 (425)
.+.+++||||||+++.. .+.|...+-|+++.+ ...++|.|.....-+.+.+
T Consensus 5 ~klia~DlDGTLL~~~~-----------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-----------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CeEEEEECcCCCcCCCC-----------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 46899999999998732 124667777888874 5788888876555444433
No 122
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=90.49 E-value=0.53 Score=42.94 Aligned_cols=81 Identities=25% Similarity=0.284 Sum_probs=55.8
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEc-cceeec---CCc----EEEe--C----
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS---DGT----YTKD--L---- 406 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~R-esC~~~---~g~----yiKD--L---- 406 (425)
...+|++.++|+++.+ .+.++|.|++...+++.+++.+.-+. +|..++.. ++-.+. .|. ..|- +
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 3579999999999984 69999999999999999999998765 66665542 210111 010 0011 2
Q ss_pred cCcCCCCCCEEEEECCC
Q 014389 407 TVLGVDLAKVAIIDNSP 423 (425)
Q Consensus 407 s~LGrDLskVVIIDDsP 423 (425)
...|.++++++.+-|++
T Consensus 165 ~~~~~~~~~~~~~gDs~ 181 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSI 181 (202)
T ss_pred HHcCCCHHHcEeeeCCc
Confidence 23366777888888876
No 123
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=90.24 E-value=0.34 Score=47.78 Aligned_cols=122 Identities=19% Similarity=0.240 Sum_probs=75.0
Q ss_pred CceEEEEecccccccccccccCCCCce------E-EE----------Eecc-----eeeeEEEeeCchHHHHHHHHH-cC
Q 014389 302 KSVTLVLDLDETLVHSTLEYCDDADFT------F-TV----------FFNM-----KEHTVYVKQRPHLKTFLERVA-EM 358 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~~~~~~~df~------~-~v----------~~~~-----~~~~vyV~lRPgL~eFLe~Ls-q~ 358 (425)
....||||+|+||+-+. .......+- + .. .+.. ....-+...=|.+-+|++.+. +.
T Consensus 19 ~~tLvvfDiDdTLi~~~-~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~ 97 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPK-QPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKG 97 (252)
T ss_pred CCeEEEEEcchhhhcCc-cccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCC
Confidence 56789999999999775 222211110 0 00 0000 011123556789999999999 66
Q ss_pred ceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEcc---------------ceeecCCc-EE----------EeCcCcCCC
Q 014389 359 FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE---------------SCIFSDGT-YT----------KDLTVLGVD 412 (425)
Q Consensus 359 YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~Re---------------sC~~~~g~-yi----------KDLs~LGrD 412 (425)
.-++..|+....|...-++.|-..|--|+...+++ .-.+.+|. +. .=|..+|+.
T Consensus 98 ~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~~L~~fL~~~~~~ 177 (252)
T PF11019_consen 98 IPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGEVLKYFLDKINQS 177 (252)
T ss_pred CcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHHHHHHHHHHcCCC
Confidence 99999999999999998887655443333332111 11222331 11 123456999
Q ss_pred CCCEEEEECCCC
Q 014389 413 LAKVAIIDNSPQ 424 (425)
Q Consensus 413 LskVVIIDDsP~ 424 (425)
+++||+|||+++
T Consensus 178 pk~IIfIDD~~~ 189 (252)
T PF11019_consen 178 PKKIIFIDDNKE 189 (252)
T ss_pred CCeEEEEeCCHH
Confidence 999999999863
No 124
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=90.19 E-value=0.58 Score=41.50 Aligned_cols=49 Identities=16% Similarity=0.331 Sum_probs=41.7
Q ss_pred EeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEE
Q 014389 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ 391 (425)
+.+|||+.++|+++. +.+.++|.|++.+.|++.+++.+.... +|..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~ 121 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLE 121 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEE
Confidence 567999999999998 569999999999999999999987663 6665554
No 125
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=89.91 E-value=0.48 Score=46.20 Aligned_cols=47 Identities=17% Similarity=0.163 Sum_probs=34.6
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchH
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSI 370 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~ 370 (425)
+.++|||||||++.... . =..=|+..++|+++.+ ...+++.|.....
T Consensus 2 k~i~~D~DGtl~~~~~~----------------~----~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~ 49 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK----------------S----GVAVPGSQEAVKRLRGASVKVRFVTNTTKE 49 (257)
T ss_pred CEEEEeCCCeEEeCCCc----------------c----cCcCCCHHHHHHHHHHCCCeEEEEECCCCC
Confidence 37899999999875210 0 0025899999999994 6999999976544
No 126
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=89.91 E-value=0.5 Score=46.36 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=32.5
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCc
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ 368 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~ 368 (425)
..+++|+||||++.. ..-||+.++|+++.+ ...+++.|+..
T Consensus 3 ~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE------------------------RVVPGAPELLDRLARAGKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 378999999997742 125889999999994 68999999854
No 127
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=89.68 E-value=0.058 Score=49.88 Aligned_cols=29 Identities=24% Similarity=0.313 Sum_probs=20.5
Q ss_pred EeeCchHHHHHHHHHcC-ceEEEEcCCchH
Q 014389 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSI 370 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~-YEIVIfTAs~~~ 370 (425)
...-||+.+.|++|.+. +++++.|+....
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 56679999999999976 588877777554
No 128
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=89.67 E-value=0.49 Score=46.49 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=41.1
Q ss_pred EeeCchHHHHHHHHH---cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEE
Q 014389 342 VKQRPHLKTFLERVA---EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (425)
Q Consensus 342 V~lRPgL~eFLe~Ls---q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ 391 (425)
+...||..+|++.++ ..++++|-+-|..-|-+.||+.-+... +|+..+.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~T 121 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFT 121 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEe
Confidence 778999999999995 379999999999999999999977654 5544443
No 129
>PLN02645 phosphoglycolate phosphatase
Probab=89.64 E-value=0.49 Score=47.42 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=39.6
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHH
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~L 379 (425)
-..++||+||||++.. .+ =||+.++|+++. +...+++.|+....-...+++.|
T Consensus 28 ~~~~~~D~DGtl~~~~----------------------~~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 28 VETFIFDCDGVIWKGD----------------------KL--IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred CCEEEEeCcCCeEeCC----------------------cc--CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence 4589999999997742 01 289999999998 57999999998755555555443
No 130
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=89.21 E-value=0.91 Score=43.89 Aligned_cols=52 Identities=13% Similarity=0.292 Sum_probs=41.5
Q ss_pred EeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEcc
Q 014389 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE 393 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~Re 393 (425)
+++|||.++|.+++.+ --.++|-++|+..|..+++..|--+.++-.--++.+
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn 124 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSN 124 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeec
Confidence 8899999999999995 589999999999999999988765443333333333
No 131
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=88.98 E-value=0.9 Score=44.64 Aligned_cols=59 Identities=15% Similarity=0.075 Sum_probs=42.7
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc--CceEEEEcCCchHHHHHHHHHH
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq--~YEIVIfTAs~~~YAd~ILd~L 379 (425)
+..|++|+||||+.....+.. ...-|.+.+-|+.|.+ ...++|.|.-...-+..++..+
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence 679999999999975321110 1224788888999985 5788888888888777776544
No 132
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=88.92 E-value=0.25 Score=47.18 Aligned_cols=76 Identities=11% Similarity=0.124 Sum_probs=54.3
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeecC---CcEEEeCcCcCCCCCCEEE
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 418 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~~---g~yiKDLs~LGrDLskVVI 418 (425)
+..-||+.++|++|++.|.++|.|++... ++.++.. .+|...+..+.....+ ..|.+-+..+|.+++++|+
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44559999999999988999999998775 2444433 4777776654332221 2455556778999999999
Q ss_pred EECCC
Q 014389 419 IDNSP 423 (425)
Q Consensus 419 IDDsP 423 (425)
|-|++
T Consensus 186 VGD~~ 190 (238)
T PRK10748 186 VGDDL 190 (238)
T ss_pred EcCCc
Confidence 98875
No 133
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=88.82 E-value=0.9 Score=49.27 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=61.6
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCch---HHHHHHHHH-cCceEEEEcCCchHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPH---LKTFLERVA-EMFEVVIFTASQSIYAAQL 375 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPg---L~eFLe~Ls-q~YEIVIfTAs~~~YAd~I 375 (425)
...+++||||||+|| |...-..|=.-.+.+..... =|- +..|...+. +.+=+.|.+-....-|..+
T Consensus 219 g~~kK~LVLDLDNTL----WGGVIGedGv~GI~Ls~~~~------G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~ev 288 (574)
T COG3882 219 GKSKKALVLDLDNTL----WGGVIGEDGVDGIRLSNSAE------GEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEV 288 (574)
T ss_pred CcccceEEEecCCcc----cccccccccccceeecCCCC------chhHHHHHHHHHHHHhccEEEEEecCCchhhHHHH
Confidence 566889999999999 43332222221222211000 122 344455555 4567888888888888877
Q ss_pred HHHHCCCCCeeeeEEEccc------eeec-C-CcEEEeCcCcCCCCCCEEEEECCCC
Q 014389 376 LDILDPDGKLISRRVYRES------CIFS-D-GTYTKDLTVLGVDLAKVAIIDNSPQ 424 (425)
Q Consensus 376 Ld~LDP~~klfs~RL~Res------C~~~-~-g~yiKDLs~LGrDLskVVIIDDsP~ 424 (425)
..+- | |-+.+++ |.+. . .+..|-.++||-.+...|+|||+|.
T Consensus 289 F~kh-p------~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ 338 (574)
T COG3882 289 FRKH-P------DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPA 338 (574)
T ss_pred HhhC-C------CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHH
Confidence 6541 1 2233322 2211 1 1333555678889999999999984
No 134
>PLN02423 phosphomannomutase
Probab=88.59 E-value=1.1 Score=43.38 Aligned_cols=56 Identities=18% Similarity=0.326 Sum_probs=37.0
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~L 379 (425)
++.+..+++||||||+.+.. .+-|...+-|+++.+...++|.|.. .| ..+.+.+
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR--~~-~~~~~~~ 57 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGS--DL-SKISEQL 57 (245)
T ss_pred CccceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCc--CH-HHHHHHh
Confidence 34455677999999997631 1246778888999877777777765 33 2454555
Q ss_pred CC
Q 014389 380 DP 381 (425)
Q Consensus 380 DP 381 (425)
.+
T Consensus 58 ~~ 59 (245)
T PLN02423 58 GK 59 (245)
T ss_pred cc
Confidence 44
No 135
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=88.48 E-value=1.2 Score=45.51 Aligned_cols=57 Identities=12% Similarity=0.155 Sum_probs=44.1
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCC
Q 014389 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 304 ltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
+.+++||||||++... | .-+-+.+-|+++. +...|++.|.-...=...+.+.|...
T Consensus 2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 5789999999998531 1 1244778888888 55899999998888888888888865
Q ss_pred C
Q 014389 383 G 383 (425)
Q Consensus 383 ~ 383 (425)
.
T Consensus 59 ~ 59 (302)
T PRK12702 59 H 59 (302)
T ss_pred C
Confidence 4
No 136
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=87.78 E-value=0.71 Score=45.28 Aligned_cols=93 Identities=14% Similarity=0.095 Sum_probs=54.1
Q ss_pred CCCceEEEEecccccccccc----cccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTL----EYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQ 374 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~----~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ 374 (425)
..+|..+|||+|||++.... .......|.-. .+..--..---..-|++.+|++++. +.++|++.|.-.......
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~-~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~ 152 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPT-AFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNA 152 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHH-HHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHH
Confidence 45788999999999998751 00011111000 0000000001245799999999997 579999999998877555
Q ss_pred HHHHHCCCCCe-eeeEEEcc
Q 014389 375 LLDILDPDGKL-ISRRVYRE 393 (425)
Q Consensus 375 ILd~LDP~~kl-fs~RL~Re 393 (425)
.++.|.-.|-- +.+.+.|.
T Consensus 153 T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 153 TLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHHcCCCCcCeeeecC
Confidence 55555444411 24455564
No 137
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=86.84 E-value=1.1 Score=43.43 Aligned_cols=39 Identities=21% Similarity=0.362 Sum_probs=30.5
Q ss_pred EEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCC
Q 014389 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS 367 (425)
Q Consensus 305 tLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs 367 (425)
.+++|+||||++... .=|+..++|+++. +...+++.|.+
T Consensus 3 ~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn 42 (249)
T TIGR01457 3 GYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNN 42 (249)
T ss_pred EEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCC
Confidence 689999999987521 1368899999998 56888899863
No 138
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=86.51 E-value=1.1 Score=44.98 Aligned_cols=54 Identities=19% Similarity=0.192 Sum_probs=40.7
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcC-ceEEEEcCCchHHHHHHHHHHC
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD 380 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~-YEIVIfTAs~~~YAd~ILd~LD 380 (425)
..++++||||||++-.. .=||+.+||+++.+. -.+++-|++..+-++.+..+|.
T Consensus 8 y~~~l~DlDGvl~~G~~------------------------~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~ 62 (269)
T COG0647 8 YDGFLFDLDGVLYRGNE------------------------AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLS 62 (269)
T ss_pred cCEEEEcCcCceEeCCc------------------------cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Confidence 44799999999987531 249999999999955 8899999987665554444443
No 139
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=86.35 E-value=0.73 Score=46.09 Aligned_cols=91 Identities=20% Similarity=0.190 Sum_probs=47.2
Q ss_pred CCCceEEEEeccccccccc----ccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEE-EEcCCchHH-HH
Q 014389 300 GRKSVTLVLDLDETLVHST----LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVV-IFTASQSIY-AA 373 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs----~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIV-IfTAs~~~Y-Ad 373 (425)
+.+++.+|||||||.+..+ |.-..+..|+-.-- +.--..---+.=||+.|||+++.++-=.| --|.-.++- .+
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~W-d~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~ 154 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETW-DKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKD 154 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccch-HHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccc
Confidence 4566699999999999875 11112222210000 00000001455699999999999765444 444444444 33
Q ss_pred HHHHHHC---CCCCeeeeEEE
Q 014389 374 QLLDILD---PDGKLISRRVY 391 (425)
Q Consensus 374 ~ILd~LD---P~~klfs~RL~ 391 (425)
.-++.|- ..+..-++.|+
T Consensus 155 ~T~~nLk~~g~~~~~~~~~ll 175 (274)
T COG2503 155 GTIENLKSEGLPQVLESHLLL 175 (274)
T ss_pred hhHHHHHHcCcccccccceEE
Confidence 3444443 33334455555
No 140
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=86.30 E-value=1.3 Score=42.32 Aligned_cols=60 Identities=25% Similarity=0.081 Sum_probs=39.1
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCc-eEEEEcCCchHHHHHHHHHHCC
Q 014389 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDILDP 381 (425)
Q Consensus 303 KltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~Y-EIVIfTAs~~~YAd~ILd~LDP 381 (425)
++.|+.||||||+...... -...|.+.+.++++.+.- .+++.|.-...=+.++++.+.+
T Consensus 1 ~~li~tDlDGTLl~~~~~~--------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGD--------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCCCCC--------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 3678999999999632100 123577788888877554 6666666666666667665554
Q ss_pred C
Q 014389 382 D 382 (425)
Q Consensus 382 ~ 382 (425)
.
T Consensus 61 ~ 61 (249)
T TIGR01485 61 L 61 (249)
T ss_pred C
Confidence 3
No 141
>PLN02887 hydrolase family protein
Probab=86.23 E-value=1.6 Score=48.06 Aligned_cols=58 Identities=22% Similarity=0.209 Sum_probs=45.7
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHC
Q 014389 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LD 380 (425)
+.+.+++||||||+++.. .+-|...+-|+++. +...++|.|.-...-+..+++.|+
T Consensus 307 ~iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred CccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 456899999999998631 13566778888888 569999999999988888998887
Q ss_pred CC
Q 014389 381 PD 382 (425)
Q Consensus 381 P~ 382 (425)
..
T Consensus 364 l~ 365 (580)
T PLN02887 364 LA 365 (580)
T ss_pred cc
Confidence 53
No 142
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=83.74 E-value=3 Score=47.04 Aligned_cols=60 Identities=18% Similarity=0.132 Sum_probs=46.1
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI 378 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~ 378 (425)
..+++.+++||||||++... ++. +...+-|+++. +...++|.|.-....+..+++.
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~---------------------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~ 469 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLT---------------------YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNE 469 (694)
T ss_pred CceeeEEEEECcCCCcCCCC---------------------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence 35678999999999998631 111 23566788887 4689999999999999999999
Q ss_pred HCCC
Q 014389 379 LDPD 382 (425)
Q Consensus 379 LDP~ 382 (425)
|+..
T Consensus 470 Lgl~ 473 (694)
T PRK14502 470 LGIK 473 (694)
T ss_pred cCCC
Confidence 8754
No 143
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=82.35 E-value=2 Score=41.30 Aligned_cols=50 Identities=26% Similarity=0.333 Sum_probs=36.8
Q ss_pred EEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCC----chHHHHHHHHHH
Q 014389 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS----QSIYAAQLLDIL 379 (425)
Q Consensus 306 LVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs----~~~YAd~ILd~L 379 (425)
++||+||||++... .=|++.++|+.+.+ .+.+++.|.+ ...+++.+.+.+
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~ 55 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL 55 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 48999999988631 13688999999985 5889888844 456676776643
No 144
>PLN03017 trehalose-phosphatase
Probab=82.22 E-value=2.2 Score=44.67 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=44.5
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd 377 (425)
..++..|+||+||||+--...+ -....-|.+.+-|++|++.+.++|-|--...-+.+++.
T Consensus 108 ~~k~~llflD~DGTL~Piv~~p------------------~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIVDDP------------------DKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred cCCCeEEEEecCCcCcCCcCCc------------------ccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence 4567899999999998321100 01134588899999999999999999988888887744
No 145
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=81.84 E-value=1.9 Score=44.68 Aligned_cols=53 Identities=19% Similarity=0.254 Sum_probs=44.4
Q ss_pred eEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHH-C------CCCCeeeeEEE
Q 014389 339 TVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL-D------PDGKLISRRVY 391 (425)
Q Consensus 339 ~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~L-D------P~~klfs~RL~ 391 (425)
.-||.+-||+.++|+++. +.+.+.|-|++...|++.+++.+ + ..+.+|+..+.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 357888999999999998 46999999999999999999997 5 34567765554
No 146
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=81.40 E-value=1.5 Score=42.42 Aligned_cols=73 Identities=16% Similarity=0.130 Sum_probs=43.3
Q ss_pred CCceEEEEeccccccccccc---------ccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchH
Q 014389 301 RKSVTLVLDLDETLVHSTLE---------YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSI 370 (425)
Q Consensus 301 ~kKltLVLDLDeTLVHSs~~---------~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~ 370 (425)
.++..+|||+||||+..... .....+|.-.+ .... -..=||..+|++++.+ .++|++-|.-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv--~~~~----~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWV--ASGK----APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHH--HCTG----GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHH--hccc----CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 67889999999999854311 00111111000 0000 1345889999999995 6999999987655
Q ss_pred HHHHHHHHH
Q 014389 371 YAAQLLDIL 379 (425)
Q Consensus 371 YAd~ILd~L 379 (425)
.-+.-++.|
T Consensus 144 ~r~~T~~nL 152 (229)
T PF03767_consen 144 QREATEKNL 152 (229)
T ss_dssp CHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 434433333
No 147
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=79.18 E-value=1.2 Score=40.07 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=14.2
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
...++||+||||++|.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4579999999999986
No 148
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=79.13 E-value=1 Score=44.56 Aligned_cols=54 Identities=19% Similarity=0.459 Sum_probs=41.4
Q ss_pred EeeCchHHHHHHHHHcC--ceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEcccee
Q 014389 342 VKQRPHLKTFLERVAEM--FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCI 396 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~--YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~ 396 (425)
+-.-||+-+.++.+++. ||++|-+-+..-+.+.+|+..+... +|+..+.-..|.
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d-~F~~IfTNPa~~ 138 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD-LFSEIFTNPACV 138 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH-HHHHHhcCCccc
Confidence 56679999999999954 8999999999999999999877653 554333333333
No 149
>PLN02151 trehalose-phosphatase
Probab=78.19 E-value=4.2 Score=42.42 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=45.8
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd 377 (425)
..++..|+||+||||+--.-. .-.+..-|.+.+-|+.|++.+.++|-|--...-.+.++.
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~------------------P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDD------------------PDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCceEEEEecCccCCCCCCC------------------cccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 456789999999999832111 112345799999999999989999999888887777664
No 150
>PRK11587 putative phosphatase; Provisional
Probab=77.66 E-value=1.2 Score=41.59 Aligned_cols=15 Identities=47% Similarity=0.596 Sum_probs=13.7
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
+.++|||||||+++.
T Consensus 4 k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 4 KGFLFDLDGTLVDSL 18 (218)
T ss_pred CEEEEcCCCCcCcCH
Confidence 579999999999996
No 151
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=77.23 E-value=2.5 Score=40.68 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=32.0
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEE--EEcCC
Q 014389 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVV--IFTAS 367 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIV--IfTAs 367 (425)
++..|+||+||||+-....+ -.++.=|++.+.|+.|.+....+ |-|--
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p------------------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR 51 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDP------------------DAAVVSDRLLTILQKLAARPHNAIWIISGR 51 (244)
T ss_pred CcEEEEEecCccccCCcCCC------------------cccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56789999999998632111 01234588999999999775544 45544
No 152
>PLN02580 trehalose-phosphatase
Probab=74.86 E-value=5.9 Score=41.77 Aligned_cols=61 Identities=20% Similarity=0.243 Sum_probs=47.4
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCchHHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~~~YAd~ILd~ 378 (425)
..++..|+||.||||.--.-. .--+..=|++.+-|+.|++.+.++|-|--...-.++++..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~------------------Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDD------------------PDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred hcCCeEEEEecCCccCCCCCC------------------cccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 457789999999999743211 1124456899999999999999999999998888877753
No 153
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=74.58 E-value=1.4 Score=40.49 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.7
Q ss_pred EEEEeccccccccc
Q 014389 305 TLVLDLDETLVHST 318 (425)
Q Consensus 305 tLVLDLDeTLVHSs 318 (425)
.|+|||||||+.|.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 58999999999986
No 154
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=74.39 E-value=1.7 Score=39.25 Aligned_cols=14 Identities=36% Similarity=0.508 Sum_probs=12.6
Q ss_pred EEEEeccccccccc
Q 014389 305 TLVLDLDETLVHST 318 (425)
Q Consensus 305 tLVLDLDeTLVHSs 318 (425)
+++|||||||+.+.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 58999999999885
No 155
>PRK11590 hypothetical protein; Provisional
Probab=73.88 E-value=4.8 Score=37.78 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=34.9
Q ss_pred EeeCchHHHHH-HHHH-cCceEEEEcCCchHHHHHHHHHHC
Q 014389 342 VKQRPHLKTFL-ERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (425)
Q Consensus 342 V~lRPgL~eFL-e~Ls-q~YEIVIfTAs~~~YAd~ILd~LD 380 (425)
+..+||+.+.| +.+. +.+.++|-|++.+.|+++++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 46699999999 5677 589999999999999999999876
No 156
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=73.68 E-value=1.9 Score=40.20 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=25.9
Q ss_pred EeeCchHHHHHHHHHcCceEEEEcCCchHH
Q 014389 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIY 371 (425)
Q Consensus 342 V~lRPgL~eFLe~Lsq~YEIVIfTAs~~~Y 371 (425)
...-||+.+-+++|-+.|+|+|-||++..|
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp 96 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHP 96 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCc
Confidence 556799999999999999999999995544
No 157
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=73.52 E-value=7.1 Score=39.20 Aligned_cols=61 Identities=20% Similarity=0.151 Sum_probs=47.1
Q ss_pred CCCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCce--EEEEcCCchHHHHHHH
Q 014389 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQLL 376 (425)
Q Consensus 299 ~~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YE--IVIfTAs~~~YAd~IL 376 (425)
...+|..++||.||||++-...+. -+..=+++.+.|..|+..+. |+|.|.-...-.+..+
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~~p~------------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~ 75 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVPHPE------------------AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLF 75 (266)
T ss_pred ccccceEEEEeccccccccccCcc------------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhc
Confidence 356778999999999988653321 13335789999999999988 8888888888877777
Q ss_pred H
Q 014389 377 D 377 (425)
Q Consensus 377 d 377 (425)
.
T Consensus 76 ~ 76 (266)
T COG1877 76 G 76 (266)
T ss_pred C
Confidence 6
No 158
>PHA02597 30.2 hypothetical protein; Provisional
Probab=73.35 E-value=1.7 Score=39.67 Aligned_cols=15 Identities=27% Similarity=0.372 Sum_probs=13.0
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
+.++|||||||++..
T Consensus 3 k~viFDlDGTLiD~~ 17 (197)
T PHA02597 3 PTILTDVDGVLLSWQ 17 (197)
T ss_pred cEEEEecCCceEchh
Confidence 579999999999953
No 159
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=72.99 E-value=7.8 Score=36.82 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=33.8
Q ss_pred EeeCchHHHHHH-HHH-cCceEEEEcCCchHHHHHHHHHH
Q 014389 342 VKQRPHLKTFLE-RVA-EMFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 342 V~lRPgL~eFLe-~Ls-q~YEIVIfTAs~~~YAd~ILd~L 379 (425)
+.++|++.+.|+ ++. +.+.++|-|++...|++++++.+
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 367999999995 777 69999999999999999999773
No 160
>PRK11590 hypothetical protein; Provisional
Probab=72.71 E-value=2 Score=40.26 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.1
Q ss_pred CceEEEEeccccccccc
Q 014389 302 KSVTLVLDLDETLVHST 318 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs 318 (425)
+++.++|||||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 45699999999999654
No 161
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=72.33 E-value=2.1 Score=39.49 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=13.5
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
..++|||||||+++.
T Consensus 3 ~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS 17 (221)
T ss_pred eEEEEeCCCCCcCCC
Confidence 479999999999986
No 162
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=70.98 E-value=2 Score=38.72 Aligned_cols=80 Identities=19% Similarity=0.196 Sum_probs=55.7
Q ss_pred EEEeeCchHHHHHHHHHcC-ceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccce-eecCCcEEEeCcCcCCCCCCEE
Q 014389 340 VYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESC-IFSDGTYTKDLTVLGVDLAKVA 417 (425)
Q Consensus 340 vyV~lRPgL~eFLe~Lsq~-YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC-~~~~g~yiKDLs~LGrDLskVV 417 (425)
..-.+||++.++|++|.+. +.++|.|......|..+++.+.... ..++.+.. .-.+..+.+=++.|+.+.+.|+
T Consensus 124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~ 199 (215)
T PF00702_consen 124 LRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVA 199 (215)
T ss_dssp EEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEE
T ss_pred ecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEE
Confidence 3467899999999999965 9999999999999999999998743 22332211 0001122333445676777888
Q ss_pred EEECCC
Q 014389 418 IIDNSP 423 (425)
Q Consensus 418 IIDDsP 423 (425)
.|=|..
T Consensus 200 ~vGDg~ 205 (215)
T PF00702_consen 200 MVGDGV 205 (215)
T ss_dssp EEESSG
T ss_pred EEccCH
Confidence 887753
No 163
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=70.42 E-value=2.3 Score=39.38 Aligned_cols=15 Identities=33% Similarity=0.412 Sum_probs=13.4
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
++++||+||||+.+.
T Consensus 2 k~iiFD~DGTL~ds~ 16 (220)
T TIGR03351 2 SLVVLDMAGTTVDED 16 (220)
T ss_pred cEEEEecCCCeeccC
Confidence 478999999999986
No 164
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=70.35 E-value=2.2 Score=40.44 Aligned_cols=16 Identities=38% Similarity=0.598 Sum_probs=14.3
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
.+.+|||+||||+++.
T Consensus 12 ~k~viFD~DGTL~Ds~ 27 (229)
T PRK13226 12 PRAVLFDLDGTLLDSA 27 (229)
T ss_pred CCEEEEcCcCccccCH
Confidence 4589999999999996
No 165
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=70.11 E-value=1.5 Score=43.01 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=16.9
Q ss_pred CCCCceEEEEeccccccccc
Q 014389 299 QGRKSVTLVLDLDETLVHST 318 (425)
Q Consensus 299 ~~~kKltLVLDLDeTLVHSs 318 (425)
.....+.+||||||||++|.
T Consensus 20 ~~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 20 LGCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred hcCCceEEEEeCCCceeCCc
Confidence 45667789999999999994
No 166
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=69.79 E-value=2.3 Score=37.88 Aligned_cols=15 Identities=20% Similarity=0.576 Sum_probs=13.5
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
..++||+||||+.+.
T Consensus 2 ~~iiFD~DGTL~ds~ 16 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA 16 (185)
T ss_pred CeEEEcCCCcccCCh
Confidence 478999999999996
No 167
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=69.70 E-value=6.9 Score=38.06 Aligned_cols=54 Identities=24% Similarity=0.221 Sum_probs=34.5
Q ss_pred CceEEEEecccccc-cccccccCCCCceEEEEecceeeeEEEeeCchHHHHHH-HHHcCceEEEEcCCchHHHHHHHHHH
Q 014389 302 KSVTLVLDLDETLV-HSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLE-RVAEMFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 302 kKltLVLDLDeTLV-HSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe-~Lsq~YEIVIfTAs~~~YAd~ILd~L 379 (425)
+++.|+-|||+||+ ... .-+.-+.++|+ ......-+++-|..+..-+.+++...
T Consensus 1 ~~~ll~sDlD~Tl~~~~~------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~ 56 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGDD------------------------EALARLEELLEQQARPEILFVYVTGRSLESVLRLLREY 56 (247)
T ss_dssp -SEEEEEETBTTTBHCHH------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHC
T ss_pred CCEEEEEECCCCCcCCCH------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhC
Confidence 36789999999999 211 01344555666 33355777788888888888888764
No 168
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=69.11 E-value=2.8 Score=41.18 Aligned_cols=16 Identities=44% Similarity=0.576 Sum_probs=14.2
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
++.++|||||||+++.
T Consensus 13 ~k~viFDlDGTL~Ds~ 28 (272)
T PRK13223 13 PRLVMFDLDGTLVDSV 28 (272)
T ss_pred CCEEEEcCCCccccCH
Confidence 3499999999999995
No 169
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=68.88 E-value=2.7 Score=40.43 Aligned_cols=16 Identities=31% Similarity=0.453 Sum_probs=14.1
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
-..++|||||||+.|.
T Consensus 22 ~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 22 LEAVLFDVDGTLCDSD 37 (248)
T ss_pred cCEEEEcCCCccCcCH
Confidence 3579999999999986
No 170
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=68.45 E-value=2.9 Score=39.91 Aligned_cols=15 Identities=20% Similarity=0.215 Sum_probs=13.4
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
+.++||+||||+.+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 579999999999984
No 171
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=68.35 E-value=2.5 Score=38.62 Aligned_cols=14 Identities=21% Similarity=0.211 Sum_probs=12.6
Q ss_pred EEEEeccccccccc
Q 014389 305 TLVLDLDETLVHST 318 (425)
Q Consensus 305 tLVLDLDeTLVHSs 318 (425)
.|+|||||||+.+.
T Consensus 2 ~viFDlDGTL~d~~ 15 (203)
T TIGR02252 2 LITFDAVGTLLALK 15 (203)
T ss_pred eEEEecCCceeeeC
Confidence 68999999999975
No 172
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=68.14 E-value=12 Score=40.87 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=37.9
Q ss_pred EEeeCchHHHHHHHHHc-CceEEEEcCCchHHHHHHHHHHCCC
Q 014389 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (425)
Q Consensus 341 yV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~YAd~ILd~LDP~ 382 (425)
.-..||++.++|+++.+ .++++|.|...+.+|+.+++.+..+
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN 445 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 45689999999999995 6999999999999999999998764
No 173
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=67.72 E-value=2.9 Score=40.50 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=13.9
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
-+.++||+||||+.+.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 3589999999999984
No 174
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=67.61 E-value=3 Score=39.76 Aligned_cols=15 Identities=40% Similarity=0.627 Sum_probs=13.4
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
+.++|||||||+.+.
T Consensus 11 k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 11 SALTFDLDDTLYDNR 25 (238)
T ss_pred eeEEEcCcccccCCh
Confidence 579999999999974
No 175
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=67.37 E-value=2.3 Score=37.02 Aligned_cols=14 Identities=43% Similarity=0.776 Sum_probs=12.6
Q ss_pred EEEEeccccccccc
Q 014389 305 TLVLDLDETLVHST 318 (425)
Q Consensus 305 tLVLDLDeTLVHSs 318 (425)
+++||+||||+++.
T Consensus 1 ~iifD~DGTL~d~~ 14 (154)
T TIGR01549 1 AILFDIDGTLVDSS 14 (154)
T ss_pred CeEecCCCcccccH
Confidence 47999999999985
No 176
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=67.19 E-value=15 Score=36.68 Aligned_cols=58 Identities=19% Similarity=0.228 Sum_probs=40.7
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHC
Q 014389 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LD 380 (425)
-.+.+.+|||+|||--..+..+ +..-|.++. ..|+||..|+-++.=-..+-+.|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~p------------------------A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~ 61 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQP------------------------AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLG 61 (274)
T ss_pred cceEEEEcccCcccCCCCCCCc------------------------cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcC
Confidence 3568999999999984332211 223455555 679999999888766666778888
Q ss_pred CCC
Q 014389 381 PDG 383 (425)
Q Consensus 381 P~~ 383 (425)
-.+
T Consensus 62 v~~ 64 (274)
T COG3769 62 VQG 64 (274)
T ss_pred CCC
Confidence 775
No 177
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=66.26 E-value=2.8 Score=37.38 Aligned_cols=14 Identities=21% Similarity=0.605 Sum_probs=12.6
Q ss_pred EEEEeccccccccc
Q 014389 305 TLVLDLDETLVHST 318 (425)
Q Consensus 305 tLVLDLDeTLVHSs 318 (425)
.++||+||||+.+.
T Consensus 1 ~iiFD~DGTL~ds~ 14 (185)
T TIGR01990 1 AVIFDLDGVITDTA 14 (185)
T ss_pred CeEEcCCCccccCh
Confidence 37999999999997
No 178
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=66.00 E-value=2.4 Score=39.03 Aligned_cols=13 Identities=54% Similarity=0.708 Sum_probs=11.9
Q ss_pred EEEeccccccccc
Q 014389 306 LVLDLDETLVHST 318 (425)
Q Consensus 306 LVLDLDeTLVHSs 318 (425)
+||||||||+.+.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 5899999999996
No 179
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=64.36 E-value=2.7 Score=38.49 Aligned_cols=13 Identities=54% Similarity=0.802 Sum_probs=11.8
Q ss_pred EEEeccccccccc
Q 014389 306 LVLDLDETLVHST 318 (425)
Q Consensus 306 LVLDLDeTLVHSs 318 (425)
+|||+||||+.|.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 5899999999986
No 180
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=63.72 E-value=17 Score=33.94 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=42.1
Q ss_pred EEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHH
Q 014389 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 305 tLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~L 379 (425)
.+|.|+||||--|-.. ...++ ..+.. +.|||+.++..++. +.|.++=-|+-.-..|+..-..|
T Consensus 1 VVvsDIDGTiT~SD~~-----G~i~~----~~G~d---~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVL-----GHILP----ILGKD---WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred CEEEeccCCcCccchh-----hhhhh----ccCch---hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 3789999999887311 00011 11112 56999999999999 56999888888766666555444
No 181
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=63.40 E-value=4 Score=40.53 Aligned_cols=18 Identities=28% Similarity=0.381 Sum_probs=15.3
Q ss_pred CCceEEEEeccccccccc
Q 014389 301 RKSVTLVLDLDETLVHST 318 (425)
Q Consensus 301 ~kKltLVLDLDeTLVHSs 318 (425)
++-..+|||+||||+.+.
T Consensus 38 ~~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 38 ALPEALLFDCDGVLVETE 55 (286)
T ss_pred cCCcEEEEeCceeEEccc
Confidence 344689999999999997
No 182
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=63.24 E-value=11 Score=42.29 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=44.4
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc--CceEEEEcCCchHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq--~YEIVIfTAs~~~YAd~ILd 377 (425)
..++..|++|+||||+.....+. .....|.+.+.|++|.+ ...|+|.|.-.....++.+.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPE------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred hccceEEEEecCccccCCCCCcc------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhC
Confidence 35678999999999986321110 11235788899999997 78899999988887777665
Q ss_pred HH
Q 014389 378 IL 379 (425)
Q Consensus 378 ~L 379 (425)
.+
T Consensus 551 ~~ 552 (726)
T PRK14501 551 DL 552 (726)
T ss_pred CC
Confidence 43
No 183
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=63.22 E-value=6.5 Score=35.05 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=38.5
Q ss_pred eCchHH----HHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCC-CeeeeEE
Q 014389 344 QRPHLK----TFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRV 390 (425)
Q Consensus 344 lRPgL~----eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~-klfs~RL 390 (425)
++|++. +||+++. +.++++|-|++...+++.+++.+.-.. .++..++
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 457777 9999985 789999999999999999999887654 2455555
No 184
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=63.16 E-value=3.5 Score=36.66 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=12.0
Q ss_pred EEEeccccccccc
Q 014389 306 LVLDLDETLVHST 318 (425)
Q Consensus 306 LVLDLDeTLVHSs 318 (425)
|+|||||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7999999999986
No 185
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=62.95 E-value=3.8 Score=37.62 Aligned_cols=15 Identities=40% Similarity=0.654 Sum_probs=13.3
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
+.++||+||||+++.
T Consensus 2 k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 2 KTLLFDLDDTILDFQ 16 (224)
T ss_pred CEEEEcCcCcccccc
Confidence 479999999999975
No 186
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=62.92 E-value=9.3 Score=38.73 Aligned_cols=89 Identities=12% Similarity=0.168 Sum_probs=50.7
Q ss_pred CceEEEEecccccccccc----cccCCCCceEEEEecceeeeE---EEeeCchHHHHHHHHH-cCceEEEEcCCchHHHH
Q 014389 302 KSVTLVLDLDETLVHSTL----EYCDDADFTFTVFFNMKEHTV---YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA 373 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~----~~~~~~df~~~v~~~~~~~~v---yV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd 373 (425)
++..+|||+|||++.... .......|.- ..+. ..++ -..-=|++.+|++++. ..++|++.|.-....-+
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~-~~w~--~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDS-ELYD--EEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQA 176 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCCh-hhhh--HHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHH
Confidence 467999999999995431 0000111110 0000 0000 1223489999999998 57999999998876655
Q ss_pred HHHHHHCCCCCe-eeeEEEcc
Q 014389 374 QLLDILDPDGKL-ISRRVYRE 393 (425)
Q Consensus 374 ~ILd~LDP~~kl-fs~RL~Re 393 (425)
.=++.|-..|-. ..+.+.|.
T Consensus 177 aT~~NL~kaGy~~~~~LiLR~ 197 (275)
T TIGR01680 177 VTEANLKKAGYHTWEKLILKD 197 (275)
T ss_pred HHHHHHHHcCCCCcceeeecC
Confidence 555666555511 23444564
No 187
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=62.83 E-value=13 Score=35.20 Aligned_cols=12 Identities=42% Similarity=0.731 Sum_probs=10.8
Q ss_pred EEEecccccccc
Q 014389 306 LVLDLDETLVHS 317 (425)
Q Consensus 306 LVLDLDeTLVHS 317 (425)
+++||||||++.
T Consensus 2 i~~DlDgTLl~~ 13 (236)
T TIGR02471 2 IITDLDNTLLGD 13 (236)
T ss_pred eEEeccccccCC
Confidence 789999999985
No 188
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=62.62 E-value=4.5 Score=37.74 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=14.5
Q ss_pred CceEEEEeccccccccc
Q 014389 302 KSVTLVLDLDETLVHST 318 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs 318 (425)
+.+.++||+||||+++.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35689999999999985
No 189
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=62.35 E-value=3.9 Score=37.29 Aligned_cols=15 Identities=33% Similarity=0.377 Sum_probs=13.2
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
+.++||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 369999999999975
No 190
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=61.99 E-value=4.7 Score=36.33 Aligned_cols=16 Identities=31% Similarity=0.439 Sum_probs=13.4
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
.+.+|||+||||+.+.
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 3579999999999853
No 191
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=61.99 E-value=3.8 Score=35.16 Aligned_cols=13 Identities=46% Similarity=0.828 Sum_probs=11.8
Q ss_pred EEEeccccccccc
Q 014389 306 LVLDLDETLVHST 318 (425)
Q Consensus 306 LVLDLDeTLVHSs 318 (425)
|+||+||||+++.
T Consensus 1 iifD~dgtL~d~~ 13 (176)
T PF13419_consen 1 IIFDLDGTLVDTD 13 (176)
T ss_dssp EEEESBTTTEEHH
T ss_pred cEEECCCCcEeCH
Confidence 6899999999986
No 192
>PRK09449 dUMP phosphatase; Provisional
Probab=61.92 E-value=3.9 Score=37.93 Aligned_cols=14 Identities=43% Similarity=0.520 Sum_probs=12.3
Q ss_pred eEEEEecccccccc
Q 014389 304 VTLVLDLDETLVHS 317 (425)
Q Consensus 304 ltLVLDLDeTLVHS 317 (425)
+.++|||||||++.
T Consensus 4 k~iiFDlDGTLid~ 17 (224)
T PRK09449 4 DWILFDADETLFHF 17 (224)
T ss_pred cEEEEcCCCchhcc
Confidence 47999999999974
No 193
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=61.44 E-value=4.6 Score=37.22 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=13.1
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
+.++|||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 479999999999874
No 194
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=60.80 E-value=4.3 Score=37.39 Aligned_cols=15 Identities=47% Similarity=0.627 Sum_probs=13.3
Q ss_pred eEEEEeccccccccc
Q 014389 304 VTLVLDLDETLVHST 318 (425)
Q Consensus 304 ltLVLDLDeTLVHSs 318 (425)
..++||+||||+++.
T Consensus 7 ~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 7 RAVAFDLDGTLVDSA 21 (226)
T ss_pred cEEEEcCCcccccCH
Confidence 489999999999875
No 195
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=59.80 E-value=5 Score=37.26 Aligned_cols=16 Identities=38% Similarity=0.424 Sum_probs=13.9
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
...++||+||||+.+.
T Consensus 4 ~~~viFD~DGTL~d~~ 19 (221)
T PRK10563 4 IEAVFFDCDGTLVDSE 19 (221)
T ss_pred CCEEEECCCCCCCCCh
Confidence 3589999999999985
No 196
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=58.76 E-value=4.3 Score=35.83 Aligned_cols=14 Identities=36% Similarity=0.729 Sum_probs=12.4
Q ss_pred EEEEeccccccccc
Q 014389 305 TLVLDLDETLVHST 318 (425)
Q Consensus 305 tLVLDLDeTLVHSs 318 (425)
.++|||||||+.+.
T Consensus 1 ~vlFDlDgtLv~~~ 14 (183)
T TIGR01509 1 AILFDLDGVLVDTS 14 (183)
T ss_pred CeeeccCCceechH
Confidence 37999999999995
No 197
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=58.41 E-value=6.3 Score=42.66 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=39.5
Q ss_pred EEEeeCchHHHHHHHHHc-Cc-eEEEEcCCchHHHHHHHHHHCCCC
Q 014389 340 VYVKQRPHLKTFLERVAE-MF-EVVIFTASQSIYAAQLLDILDPDG 383 (425)
Q Consensus 340 vyV~lRPgL~eFLe~Lsq-~Y-EIVIfTAs~~~YAd~ILd~LDP~~ 383 (425)
.....||++.+.|+++.+ .+ +++|.|...+.+|..+++.+..++
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~ 404 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE 404 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh
Confidence 346789999999999995 58 999999999999999999998764
No 198
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=52.14 E-value=5 Score=39.72 Aligned_cols=81 Identities=14% Similarity=0.033 Sum_probs=60.1
Q ss_pred EEEeeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCCCeeeeEEEccceeec---CCcEEEeCcCcCCCCCC
Q 014389 340 VYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAK 415 (425)
Q Consensus 340 vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~klfs~RL~ResC~~~---~g~yiKDLs~LGrDLsk 415 (425)
.+...+|-+ ++|++++ +.+.|.|.|....++= .++..+.-. .+|++.+..-.-... ...|.+=|..+|..++.
T Consensus 111 ~~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee 187 (237)
T KOG3085|consen 111 AWKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEE 187 (237)
T ss_pred CceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHH
Confidence 345556666 9999999 5789999999988877 777777766 578877763322222 24677778888888999
Q ss_pred EEEEECCC
Q 014389 416 VAIIDNSP 423 (425)
Q Consensus 416 VVIIDDsP 423 (425)
+|.|||..
T Consensus 188 ~vhIgD~l 195 (237)
T KOG3085|consen 188 CVHIGDLL 195 (237)
T ss_pred eEEecCcc
Confidence 99999975
No 199
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=50.32 E-value=24 Score=38.28 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=40.3
Q ss_pred EEeeCchHHHHHHHHHc-C-ceEEEEcCCchHHHHHHHHHHCCCCCeee
Q 014389 341 YVKQRPHLKTFLERVAE-M-FEVVIFTASQSIYAAQLLDILDPDGKLIS 387 (425)
Q Consensus 341 yV~lRPgL~eFLe~Lsq-~-YEIVIfTAs~~~YAd~ILd~LDP~~klfs 387 (425)
....|||+.+.|+++.+ . +.++|.|...+.+|+.+++.++.+. +|.
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~ 429 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHA 429 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eec
Confidence 46789999999999984 6 9999999999999999999998864 443
No 200
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=50.13 E-value=5.5 Score=42.01 Aligned_cols=16 Identities=31% Similarity=0.559 Sum_probs=14.1
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
...++|||||||+++.
T Consensus 241 ~k~vIFDlDGTLiDs~ 256 (459)
T PRK06698 241 LQALIFDMDGTLFQTD 256 (459)
T ss_pred hhheeEccCCceecch
Confidence 3579999999999986
No 201
>PLN02382 probable sucrose-phosphatase
Probab=47.65 E-value=42 Score=35.46 Aligned_cols=18 Identities=39% Similarity=0.623 Sum_probs=14.9
Q ss_pred CCCceEEEEecccccccc
Q 014389 300 GRKSVTLVLDLDETLVHS 317 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHS 317 (425)
..+++.|+.||||||+..
T Consensus 6 ~~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCCEEEEEcCCCcCcCC
Confidence 345789999999999964
No 202
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=46.98 E-value=9.1 Score=40.34 Aligned_cols=18 Identities=0% Similarity=0.172 Sum_probs=15.4
Q ss_pred CCceEEEEeccccccccc
Q 014389 301 RKSVTLVLDLDETLVHST 318 (425)
Q Consensus 301 ~kKltLVLDLDeTLVHSs 318 (425)
.+-+.+|||+|||||.+.
T Consensus 129 ~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred CCCCEEEEcCcCcceeCH
Confidence 456789999999999875
No 203
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=44.30 E-value=12 Score=35.08 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=13.7
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
+.++++|+||||+.+.
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 4589999999999874
No 204
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=43.05 E-value=15 Score=33.87 Aligned_cols=16 Identities=31% Similarity=0.463 Sum_probs=13.8
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
.+.++||+||||++..
T Consensus 4 ~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 4 IKAILFDLDGTLLDFD 19 (229)
T ss_pred eeEEEEecCCcccccc
Confidence 4689999999999974
No 205
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=42.72 E-value=34 Score=36.57 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=38.5
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCceEEEEcCCc
Q 014389 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQ 368 (425)
Q Consensus 301 ~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YEIVIfTAs~ 368 (425)
...+.+.||+|+|||.+... ..|......|.+..++....+=+.=.+.|-++|||...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg----------~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSG----------KVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCc----------ceeeccCccceeeccccchhhhhhccCCeEEEEEeccc
Confidence 44567899999999997532 12223344555656666666555555789999999754
No 206
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=41.17 E-value=15 Score=33.82 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=12.5
Q ss_pred EEEEeccccccccc
Q 014389 305 TLVLDLDETLVHST 318 (425)
Q Consensus 305 tLVLDLDeTLVHSs 318 (425)
++||||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999974
No 207
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=41.10 E-value=41 Score=32.01 Aligned_cols=51 Identities=22% Similarity=0.173 Sum_probs=30.1
Q ss_pred EEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHcCce--EEEEcCCchHHHHHH
Q 014389 307 VLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQL 375 (425)
Q Consensus 307 VLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq~YE--IVIfTAs~~~YAd~I 375 (425)
.||.||||.--.-.+ --.+.-|++.+.|+.|+.... |+|-|.-...-.+..
T Consensus 1 ~lDyDGTL~p~~~~p------------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP------------------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp EEE-TTTSS---S-G------------------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred CcccCCccCCCCCCc------------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 489999997543211 124557999999999997766 888888777764443
No 208
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=39.03 E-value=17 Score=34.61 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=14.2
Q ss_pred CceEEEEeccccccccc
Q 014389 302 KSVTLVLDLDETLVHST 318 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs 318 (425)
-+...+||+||||++..
T Consensus 4 ~~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQD 20 (210)
T ss_pred cCcEEEEcCCCCCccCc
Confidence 35678999999999974
No 209
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=38.69 E-value=48 Score=38.53 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=41.5
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHH--cCceEEEEcCCchHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA--EMFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Ls--q~YEIVIfTAs~~~YAd~ILd 377 (425)
..++..|+||+||||+...-. -+..-|++.+-|++|. +...++|.|.-...-.++++.
T Consensus 593 ~~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 593 RTTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred hhcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 346788999999999954210 0122468899999985 457788888877777666664
Q ss_pred HH
Q 014389 378 IL 379 (425)
Q Consensus 378 ~L 379 (425)
.+
T Consensus 653 ~~ 654 (854)
T PLN02205 653 PC 654 (854)
T ss_pred CC
Confidence 44
No 210
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=38.42 E-value=1.6e+02 Score=27.30 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=64.9
Q ss_pred CceEEEEecccccccccccccCCCCceE-EEEecceeeeEEEeeCchHHHHHHHHH-cCceEEEEcCC-chHHHHHHHHH
Q 014389 302 KSVTLVLDLDETLVHSTLEYCDDADFTF-TVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDI 378 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs~~~~~~~df~~-~v~~~~~~~~vyV~lRPgL~eFLe~Ls-q~YEIVIfTAs-~~~YAd~ILd~ 378 (425)
++...++|||-||.-.-..-. -++.| |++-..+..+.-...=|..+.-|..|+ +.-++++-+.+ ...||.+.|+.
T Consensus 4 ~p~~~~fdldytiwP~~vdth--l~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~ 81 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWPRLVDTH--LDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLET 81 (144)
T ss_pred CCceeEEeccceeeeEEEEec--ccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHH
Confidence 445677888887754421111 11111 111122233444555688889999999 46888888877 78999999999
Q ss_pred HCCCCCeeeeEEEccce---eecCCcEE---EeCcC-cCCCCCCEEEEECC
Q 014389 379 LDPDGKLISRRVYRESC---IFSDGTYT---KDLTV-LGVDLAKVAIIDNS 422 (425)
Q Consensus 379 LDP~~klfs~RL~ResC---~~~~g~yi---KDLs~-LGrDLskVVIIDDs 422 (425)
+-.... +.-+-.-+.- ...+|..+ |++.. =|..-++.++.||.
T Consensus 82 fkvk~~-Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDe 131 (144)
T KOG4549|consen 82 FKVKQT-GVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDE 131 (144)
T ss_pred hccCcc-cccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeeccc
Confidence 865432 1111111111 11233222 44432 25666777777774
No 211
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=38.35 E-value=53 Score=29.92 Aligned_cols=71 Identities=23% Similarity=0.288 Sum_probs=43.9
Q ss_pred EEEecceeeeEEEeeCchHHHHHHHHHc-CceEEEEcCCchH-HHHHHHHHHCCCCCeeeeEEEccceeecCCcEEEeCc
Q 014389 330 TVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSI-YAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLT 407 (425)
Q Consensus 330 ~v~~~~~~~~vyV~lRPgL~eFLe~Lsq-~YEIVIfTAs~~~-YAd~ILd~LDP~~klfs~RL~ResC~~~~g~yiKDLs 407 (425)
.+.+.+++ ..++.+.++++.+.+ .+.+.|+|.+... --+.++..+|- ...|.|+++|.
T Consensus 64 gVt~SGGE-----l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~---------------l~~g~y~~~~~ 123 (147)
T TIGR02826 64 CVLFLGGE-----WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY---------------LKTGRWIHTRG 123 (147)
T ss_pred EEEEechh-----cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE---------------EEEChHHHHcC
Confidence 46666666 367899999999995 5899999986542 23455555542 23455554554
Q ss_pred CcCCCCCCEEEEE
Q 014389 408 VLGVDLAKVAIID 420 (425)
Q Consensus 408 ~LGrDLskVVIID 420 (425)
.+++.-+|=.|+|
T Consensus 124 ~~~~~~sNQ~~~~ 136 (147)
T TIGR02826 124 GLGSPTTNQIFID 136 (147)
T ss_pred CCCCCCcCceEEE
Confidence 4443334555555
No 212
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=37.14 E-value=56 Score=37.59 Aligned_cols=64 Identities=17% Similarity=0.147 Sum_probs=45.2
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc--CceEEEEcCCchHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq--~YEIVIfTAs~~~YAd~ILd 377 (425)
..++..|+||.||||+.-.-.+ ....-+..-|++.+-|+.|++ .-.|+|-|--...-.++++.
T Consensus 504 ~a~~rll~LDyDGTL~~~~~~~---------------~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 504 KSNNRLLILGFYGTLTEPRNSQ---------------IKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred hccCeEEEEecCccccCCCCCc---------------cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 3467889999999998532111 001123456899999999995 47899999888877777775
Q ss_pred H
Q 014389 378 I 378 (425)
Q Consensus 378 ~ 378 (425)
.
T Consensus 569 ~ 569 (797)
T PLN03063 569 E 569 (797)
T ss_pred C
Confidence 4
No 213
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=33.32 E-value=48 Score=33.17 Aligned_cols=51 Identities=20% Similarity=0.333 Sum_probs=35.5
Q ss_pred EEeeCchHHHHHHHHHcC-ceEEEEcCCchHHHHHHHHHHC---CCCCeeeeEEE
Q 014389 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD---PDGKLISRRVY 391 (425)
Q Consensus 341 yV~lRPgL~eFLe~Lsq~-YEIVIfTAs~~~YAd~ILd~LD---P~~klfs~RL~ 391 (425)
-+.+|.|+.+|++.|.+. -=+.||+||.-.-.+.+++.-. |+=+.++..+.
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~ 142 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMD 142 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EE
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEE
Confidence 478999999999999965 7899999999999999998742 33345555554
No 214
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.76 E-value=27 Score=31.03 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=11.5
Q ss_pred EEEeccccccccc
Q 014389 306 LVLDLDETLVHST 318 (425)
Q Consensus 306 LVLDLDeTLVHSs 318 (425)
+++|+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999875
No 215
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=30.21 E-value=93 Score=33.61 Aligned_cols=53 Identities=23% Similarity=0.380 Sum_probs=40.7
Q ss_pred eEEEeeCchHHHHHHHHHcCc-eEEEEcCCchHHHHHHHHH-HCC-------CCCeeeeEEE
Q 014389 339 TVYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDI-LDP-------DGKLISRRVY 391 (425)
Q Consensus 339 ~vyV~lRPgL~eFLe~Lsq~Y-EIVIfTAs~~~YAd~ILd~-LDP-------~~klfs~RL~ 391 (425)
.-||.+-|.+..+|++|.+.- .+.+-|+|...|++.+++. +++ ++.||+-.+.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 347788999999999999764 8999999999999999987 455 5678877765
No 216
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=29.71 E-value=26 Score=31.83 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=11.3
Q ss_pred EEEeccccccccc
Q 014389 306 LVLDLDETLVHST 318 (425)
Q Consensus 306 LVLDLDeTLVHSs 318 (425)
.++|+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999863
No 217
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=27.89 E-value=1.1e+02 Score=36.10 Aligned_cols=71 Identities=15% Similarity=0.195 Sum_probs=47.5
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEecceeeeEEEeeCchHHHHHHHHHc--CceEEEEcCCchHHHHHHHH
Q 014389 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (425)
Q Consensus 300 ~~kKltLVLDLDeTLVHSs~~~~~~~df~~~v~~~~~~~~vyV~lRPgL~eFLe~Lsq--~YEIVIfTAs~~~YAd~ILd 377 (425)
..++..|+||.||||+--.-.+....... ..+-+..-|.+.+.|+.|.. ...|+|-|--.+.-.+..+.
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~~---------~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg 658 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQI---------KEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFG 658 (934)
T ss_pred hccceEEEEecCceeccCCCCcccccccc---------cccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhC
Confidence 34678899999999986432111000000 01123445889999999995 47899999999988888776
Q ss_pred HH
Q 014389 378 IL 379 (425)
Q Consensus 378 ~L 379 (425)
.+
T Consensus 659 ~~ 660 (934)
T PLN03064 659 EF 660 (934)
T ss_pred CC
Confidence 55
No 218
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=27.86 E-value=44 Score=36.43 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.4
Q ss_pred eEEEEcCCchHHHHHHHHH-HCCC
Q 014389 360 EVVIFTASQSIYAAQLLDI-LDPD 382 (425)
Q Consensus 360 EIVIfTAs~~~YAd~ILd~-LDP~ 382 (425)
+.+|-||+.+.|++++++. |+-+
T Consensus 124 ~~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 124 KRYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CEEEEECCcHHHHHHHHHHcCCCC
Confidence 4599999999999999975 6655
No 219
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=27.12 E-value=49 Score=34.31 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=31.6
Q ss_pred EEEeeCc-hHHHHHHHHHc------CceEEEEcCCchHHHHHHHHHH
Q 014389 340 VYVKQRP-HLKTFLERVAE------MFEVVIFTASQSIYAAQLLDIL 379 (425)
Q Consensus 340 vyV~lRP-gL~eFLe~Lsq------~YEIVIfTAs~~~YAd~ILd~L 379 (425)
+.++.|| ++++-|+.+.+ .++|+|+--|...-+..++...
T Consensus 6 v~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~ 52 (334)
T cd02514 6 VIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSF 52 (334)
T ss_pred EEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhh
Confidence 4678899 79999999995 4899999988877666666554
No 220
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=24.82 E-value=41 Score=39.90 Aligned_cols=17 Identities=29% Similarity=0.513 Sum_probs=14.7
Q ss_pred CceEEEEeccccccccc
Q 014389 302 KSVTLVLDLDETLVHST 318 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs 318 (425)
+-..++|||||||+++.
T Consensus 74 ~ikaVIFDlDGTLiDS~ 90 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSE 90 (1057)
T ss_pred CCCEEEECCCCCeEeCh
Confidence 44579999999999996
No 221
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=22.20 E-value=1.2e+02 Score=25.59 Aligned_cols=16 Identities=50% Similarity=0.536 Sum_probs=13.9
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
..+|||+=|||.|.+.
T Consensus 39 ~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 39 VLTLVLEEDGTAVDSE 54 (81)
T ss_pred ceEEEEecCCCEEccH
Confidence 4799999999999863
No 222
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.02 E-value=1.3e+02 Score=25.18 Aligned_cols=16 Identities=50% Similarity=0.594 Sum_probs=13.9
Q ss_pred ceEEEEeccccccccc
Q 014389 303 SVTLVLDLDETLVHST 318 (425)
Q Consensus 303 KltLVLDLDeTLVHSs 318 (425)
..+|||+=|||.|.+.
T Consensus 40 ~~~lvL~eDGT~Vd~E 55 (78)
T cd06539 40 LVTLVLEEDGTVVDTE 55 (78)
T ss_pred CcEEEEeCCCCEEccH
Confidence 5799999999999763
No 223
>PRK10671 copA copper exporting ATPase; Provisional
Probab=20.98 E-value=1.2e+02 Score=34.73 Aligned_cols=41 Identities=17% Similarity=0.201 Sum_probs=37.2
Q ss_pred eeCchHHHHHHHHH-cCceEEEEcCCchHHHHHHHHHHCCCC
Q 014389 343 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG 383 (425)
Q Consensus 343 ~lRPgL~eFLe~Ls-q~YEIVIfTAs~~~YAd~ILd~LDP~~ 383 (425)
..||++.+.|+++. +.+.+++.|...+..|+.+++.++...
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~ 691 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE 691 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE
Confidence 56999999999998 469999999999999999999998764
No 224
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=20.52 E-value=59 Score=29.22 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=12.1
Q ss_pred EEEEeccccccccc
Q 014389 305 TLVLDLDETLVHST 318 (425)
Q Consensus 305 tLVLDLDeTLVHSs 318 (425)
+++||.||||....
T Consensus 3 ~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 3 AICFDKTGTLTQGK 16 (215)
T ss_dssp EEEEECCTTTBESH
T ss_pred EEEEecCCCcccCe
Confidence 79999999997764
No 225
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=20.30 E-value=1.4e+02 Score=25.14 Aligned_cols=17 Identities=41% Similarity=0.536 Sum_probs=14.4
Q ss_pred CceEEEEeccccccccc
Q 014389 302 KSVTLVLDLDETLVHST 318 (425)
Q Consensus 302 kKltLVLDLDeTLVHSs 318 (425)
...+|||+=|||.|.+.
T Consensus 41 ~~~~lvL~eDGT~VddE 57 (80)
T cd06536 41 APITLVLAEDGTIVEDE 57 (80)
T ss_pred CceEEEEecCCcEEccH
Confidence 45799999999999763
No 226
>PF13701 DDE_Tnp_1_4: Transposase DDE domain group 1
Probab=20.25 E-value=2.6e+02 Score=29.96 Aligned_cols=83 Identities=20% Similarity=0.338 Sum_probs=47.0
Q ss_pred CceEEEEeccccccc--cccccc------CCCCceEEEEe-cceeeeEEEeeCch-------HHHHHHHHHcCc-----e
Q 014389 302 KSVTLVLDLDETLVH--STLEYC------DDADFTFTVFF-NMKEHTVYVKQRPH-------LKTFLERVAEMF-----E 360 (425)
Q Consensus 302 kKltLVLDLDeTLVH--Ss~~~~------~~~df~~~v~~-~~~~~~vyV~lRPg-------L~eFLe~Lsq~Y-----E 360 (425)
.+..+|||+|.|..- ...+.. ...-|.--+-| ...+.-+...+||| +.+||+.+-+.+ +
T Consensus 138 ~~~~i~LDiD~T~~~~~G~Qe~~~~n~y~g~~gY~PL~~f~g~~G~~l~a~LRpGn~~sa~g~~~fL~~~l~~lr~~~~~ 217 (448)
T PF13701_consen 138 PPKEIVLDIDSTVDDVHGEQEGAVFNTYYGEDGYHPLVAFDGQTGYLLAAELRPGNVHSAKGAAEFLKRVLRRLRQRWPD 217 (448)
T ss_pred ccceEEEecccccccchhhcccccccccCCCcccccceeccCCCCceEEEEccCCCCChHHHHHHHHHHHHHHHhhhCcc
Confidence 346899999999743 321111 11122211122 23444566889996 567777665333 2
Q ss_pred -EEEEcCCchHHHHHHHHHHCCCCC
Q 014389 361 -VVIFTASQSIYAAQLLDILDPDGK 384 (425)
Q Consensus 361 -IVIfTAs~~~YAd~ILd~LDP~~k 384 (425)
-+++=+-+--+...+++.+.-.+.
T Consensus 218 ~~ILvR~DSgF~~~el~~~ce~~g~ 242 (448)
T PF13701_consen 218 TRILVRGDSGFASPELMDWCEAEGV 242 (448)
T ss_pred ceEEEEecCccCcHHHHHHHHhCCC
Confidence 245666666677778888776663
Done!