Query 014393
Match_columns 425
No_of_seqs 260 out of 1181
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 10:46:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014393.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014393hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x5n_A SPRPN10, 26S proteasome 100.0 2.7E-28 9.1E-33 226.8 19.9 172 86-259 2-182 (192)
2 4b4t_W RPN10, 26S proteasome r 99.9 7.2E-26 2.5E-30 220.6 17.2 172 88-260 5-187 (268)
3 3ibs_A Conserved hypothetical 99.9 3.2E-22 1.1E-26 185.3 20.9 170 82-261 9-209 (218)
4 1z60_A TFIIH basal transcripti 99.8 1.1E-22 3.6E-27 154.0 0.2 59 344-412 1-59 (59)
5 1shu_X Anthrax toxin receptor 99.8 1.4E-19 4.7E-24 162.7 12.2 170 82-262 4-178 (182)
6 1q0p_A Complement factor B; VO 99.8 1.6E-19 5.4E-24 167.1 12.9 173 83-263 14-217 (223)
7 2b2x_A Integrin alpha-1; compu 99.8 2.3E-18 7.9E-23 161.1 15.8 171 82-262 20-208 (223)
8 1v7p_C Integrin alpha-2; snake 99.8 4.1E-18 1.4E-22 156.6 16.5 166 88-261 8-191 (200)
9 1ijb_A VON willebrand factor; 99.8 1.9E-17 6.5E-22 152.9 19.4 169 88-262 15-192 (202)
10 1n3y_A Integrin alpha-X; alpha 99.8 8.2E-19 2.8E-23 159.9 7.6 166 88-261 11-189 (198)
11 1pt6_A Integrin alpha-1; cell 99.8 1.2E-17 4E-22 155.0 15.3 165 88-260 9-191 (213)
12 1rrk_A Complement factor B; BB 99.7 2.1E-17 7.1E-22 171.3 17.7 170 88-263 3-203 (497)
13 4hqf_A Thrombospondin-related 99.7 2.1E-17 7.3E-22 160.2 15.2 173 82-261 19-205 (281)
14 1atz_A VON willebrand factor; 99.7 1E-16 3.5E-21 145.8 18.5 162 88-258 7-177 (189)
15 4hqo_A Sporozoite surface prot 99.7 5.5E-17 1.9E-21 156.6 17.6 174 82-263 16-204 (266)
16 1mf7_A Integrin alpha M; cell 99.7 4.6E-18 1.6E-22 155.1 9.5 166 88-261 7-185 (194)
17 3n2n_F Anthrax toxin receptor 99.7 1.7E-17 6E-22 149.3 13.0 165 88-262 9-181 (185)
18 4fx5_A VON willebrand factor t 99.7 9E-17 3.1E-21 167.6 20.3 164 88-262 79-254 (464)
19 1jey_B KU80; double-strand DNA 99.7 1.1E-16 3.8E-21 170.6 16.3 161 88-249 9-228 (565)
20 2x31_A Magnesium-chelatase 60 99.7 2.9E-19 9.9E-24 162.2 -5.6 166 88-261 7-186 (189)
21 2odp_A Complement C2; C3/C5 co 99.7 1.6E-16 5.5E-21 165.5 13.3 169 88-262 11-210 (509)
22 3hrz_D Complement factor B; se 99.7 3.2E-16 1.1E-20 170.1 14.8 172 83-262 242-444 (741)
23 2xgg_A Microneme protein 2; A/ 99.6 1.9E-15 6.7E-20 136.5 14.5 142 82-231 15-163 (178)
24 3zqk_A VON willebrand factor; 99.6 2.2E-14 7.5E-19 132.0 14.1 161 87-262 22-190 (199)
25 1mjn_A Integrin alpha-L; rossm 99.6 2E-15 6.9E-20 136.7 6.0 160 88-261 4-175 (179)
26 1jey_A KU70; double-strand DNA 99.5 8.8E-14 3E-18 149.5 15.7 142 88-230 37-208 (609)
27 3k6s_A Integrin alpha-X; cell 99.4 4.3E-14 1.5E-18 160.9 4.8 162 88-257 132-306 (1095)
28 1yvr_A RO autoantigen, 60-kDa 99.2 2.5E-11 8.6E-16 128.5 11.5 145 87-245 369-538 (538)
29 2nvo_A RO sixty-related protei 99.1 1.7E-09 5.8E-14 114.6 15.2 144 88-246 364-535 (535)
30 2ww8_A RRGA, cell WALL surface 98.9 1.3E-09 4.3E-14 121.8 9.7 115 81-199 221-387 (893)
31 2iue_A Pactolus I-domain; memb 98.6 1.9E-06 6.6E-11 80.9 17.8 162 88-259 5-206 (212)
32 3rag_A Uncharacterized protein 98.6 1.1E-07 3.9E-12 90.9 8.3 89 88-184 136-227 (242)
33 3rag_A Uncharacterized protein 98.4 7.8E-07 2.7E-11 85.1 10.4 60 190-250 9-76 (242)
34 2nut_A Protein transport prote 98.4 4.3E-06 1.5E-10 92.1 17.4 164 88-263 134-395 (769)
35 1pcx_A Protein transport prote 98.3 1.9E-05 6.5E-10 87.5 19.0 152 88-248 189-410 (810)
36 3fcs_B Integrin beta-3; beta p 98.3 9.2E-06 3.1E-10 88.4 15.9 154 88-250 113-334 (690)
37 1m2v_B SEC24, protein transpor 98.2 3.8E-05 1.3E-09 86.1 17.8 152 88-248 305-526 (926)
38 1m2o_A SEC23, protein transpor 98.0 0.00027 9.2E-09 77.9 19.9 165 88-264 123-390 (768)
39 3k6s_B Integrin beta-2; cell r 98.0 1E-05 3.5E-10 88.0 8.3 155 88-252 106-326 (687)
40 3t3p_B Integrin beta-3; integr 97.9 0.00068 2.3E-08 70.5 19.8 162 88-258 113-344 (472)
41 3vi3_B Integrin beta-1; beta p 97.9 0.00045 1.5E-08 71.4 18.1 159 88-259 124-352 (454)
42 3eh1_A Protein transport prote 97.8 0.00074 2.5E-08 74.2 18.6 150 88-248 162-374 (751)
43 3v4v_B Integrin beta-7; cell a 97.6 0.0005 1.7E-08 71.8 13.5 160 88-258 134-363 (503)
44 3eh2_A Protein transport prote 97.5 0.0015 5.2E-08 71.9 16.6 155 88-249 175-396 (766)
45 3efo_B SEC24 related gene fami 97.5 0.0021 7.1E-08 70.9 17.1 157 87-250 178-401 (770)
46 2dlq_A GLI-kruppel family memb 92.3 0.087 3E-06 42.7 3.3 87 304-406 7-118 (124)
47 2i13_A AART; DNA binding, zinc 91.6 0.031 1.1E-06 49.4 -0.2 91 304-413 49-169 (190)
48 1z2q_A LM5-1; membrane protein 90.9 0.18 6.2E-06 40.0 3.7 52 357-412 15-74 (84)
49 2lt7_A Transcriptional regulat 90.7 0.14 4.9E-06 43.6 3.1 34 304-337 22-69 (133)
50 2yw8_A RUN and FYVE domain-con 90.7 0.16 5.6E-06 40.1 3.2 37 360-400 16-52 (82)
51 1iym_A EL5; ring-H2 finger, ub 90.7 0.27 9.1E-06 34.8 4.1 47 363-413 5-51 (55)
52 1x4u_A Zinc finger, FYVE domai 90.5 0.2 7E-06 39.6 3.6 40 357-400 8-47 (84)
53 2dmd_A Zinc finger protein 64, 90.5 0.21 7.2E-06 38.6 3.7 73 317-407 7-88 (96)
54 2djb_A Polycomb group ring fin 89.9 0.24 8.2E-06 37.3 3.5 54 363-423 15-68 (72)
55 3lrq_A E3 ubiquitin-protein li 89.7 0.12 4E-06 42.0 1.6 52 364-422 23-75 (100)
56 2dlq_A GLI-kruppel family memb 89.7 0.19 6.4E-06 40.6 2.9 78 317-413 6-102 (124)
57 2ect_A Ring finger protein 126 89.6 0.57 1.9E-05 35.6 5.4 57 362-423 14-70 (78)
58 1joc_A EEA1, early endosomal a 89.3 0.19 6.5E-06 43.0 2.7 35 362-400 68-102 (125)
59 2ecw_A Tripartite motif-contai 89.1 0.35 1.2E-05 36.9 4.0 53 362-422 18-76 (85)
60 3t7l_A Zinc finger FYVE domain 89.1 0.21 7.2E-06 40.2 2.7 35 362-400 19-53 (90)
61 2ee8_A Protein ODD-skipped-rel 89.0 0.17 5.8E-06 40.0 2.1 43 365-407 47-97 (106)
62 2yur_A Retinoblastoma-binding 88.7 0.42 1.4E-05 36.3 4.1 55 363-424 15-72 (74)
63 4ap4_A E3 ubiquitin ligase RNF 88.5 0.061 2.1E-06 44.9 -0.9 92 306-419 36-127 (133)
64 2i13_A AART; DNA binding, zinc 88.5 0.13 4.6E-06 45.2 1.3 84 304-406 77-184 (190)
65 6rxn_A Rubredoxin; electron tr 88.0 0.24 8.2E-06 35.2 2.0 24 304-327 4-39 (46)
66 2y43_A E3 ubiquitin-protein li 87.3 0.25 8.7E-06 39.5 2.1 50 364-420 23-72 (99)
67 1x4j_A Ring finger protein 38; 87.3 0.45 1.5E-05 36.0 3.4 50 362-416 22-71 (75)
68 2ecv_A Tripartite motif-contai 87.2 0.74 2.5E-05 35.0 4.7 54 362-423 18-77 (85)
69 3ztg_A E3 ubiquitin-protein li 86.9 0.66 2.3E-05 36.4 4.4 47 362-415 12-60 (92)
70 3pwf_A Rubrerythrin; non heme 86.2 0.3 1E-05 43.9 2.2 24 304-327 138-162 (170)
71 1vfy_A Phosphatidylinositol-3- 85.5 0.49 1.7E-05 36.4 2.8 32 364-399 12-43 (73)
72 1y02_A CARP2, FYVE-ring finger 85.4 0.14 4.9E-06 43.6 -0.3 46 363-412 19-64 (120)
73 2ecm_A Ring finger and CHY zin 85.4 0.91 3.1E-05 31.8 4.0 49 363-415 5-53 (55)
74 2egp_A Tripartite motif-contai 85.3 0.8 2.8E-05 34.6 4.0 54 362-423 11-71 (79)
75 1wfk_A Zinc finger, FYVE domai 85.3 0.61 2.1E-05 37.3 3.4 47 362-412 8-61 (88)
76 1wg2_A Zinc finger (AN1-like) 84.8 0.75 2.6E-05 34.9 3.4 42 359-410 11-52 (64)
77 2yt9_A Zinc finger-containing 84.2 0.5 1.7E-05 36.3 2.4 43 365-407 37-90 (95)
78 1wff_A Riken cDNA 2810002D23 p 84.1 0.99 3.4E-05 36.1 4.0 40 362-410 24-63 (85)
79 2kmk_A Zinc finger protein GFI 84.1 0.11 3.8E-06 38.8 -1.5 70 319-406 2-80 (82)
80 2ep4_A Ring finger protein 24; 83.8 0.93 3.2E-05 34.0 3.7 50 362-416 14-63 (74)
81 2ct7_A Ring finger protein 31; 83.7 0.58 2E-05 37.1 2.6 39 365-405 27-68 (86)
82 1lko_A Rubrerythrin all-iron(I 83.3 0.41 1.4E-05 43.7 1.7 24 304-327 155-180 (191)
83 1bor_A Transcription factor PM 83.0 2 6.7E-05 30.7 5.0 42 363-415 6-47 (56)
84 2kiz_A E3 ubiquitin-protein li 82.9 1 3.5E-05 33.2 3.5 50 362-416 13-62 (69)
85 2v3b_B Rubredoxin 2, rubredoxi 82.6 0.62 2.1E-05 34.2 2.1 24 304-327 3-45 (55)
86 3zyq_A Hepatocyte growth facto 82.1 1.5 5.2E-05 40.9 5.2 33 364-400 165-197 (226)
87 2ckl_A Polycomb group ring fin 82.0 0.63 2.1E-05 37.8 2.2 48 363-417 15-62 (108)
88 2kn9_A Rubredoxin; metalloprot 81.9 0.64 2.2E-05 36.9 2.1 24 304-327 27-69 (81)
89 2dmi_A Teashirt homolog 3; zin 81.9 0.95 3.2E-05 36.1 3.3 74 319-406 20-103 (115)
90 1chc_A Equine herpes virus-1 r 81.7 1.2 4.1E-05 32.7 3.5 47 363-416 5-51 (68)
91 1t1h_A Gspef-atpub14, armadill 81.2 1 3.5E-05 34.1 3.0 54 362-423 7-61 (78)
92 2jp9_A Wilms tumor 1; DNA bind 80.7 0.4 1.4E-05 38.4 0.6 70 318-406 36-119 (119)
93 1jm7_A BRCA1, breast cancer ty 80.2 1.3 4.6E-05 35.7 3.7 50 364-421 22-74 (112)
94 1dvp_A HRS, hepatocyte growth 80.2 0.88 3E-05 42.1 2.8 33 364-400 162-194 (220)
95 3ng2_A RNF4, snurf, ring finge 80.1 0.67 2.3E-05 34.3 1.6 58 362-420 9-66 (71)
96 2d8t_A Dactylidin, ring finger 80.1 0.68 2.3E-05 34.6 1.6 48 362-417 14-61 (71)
97 2ecy_A TNF receptor-associated 79.8 1.8 6E-05 31.7 3.9 50 362-419 14-64 (66)
98 1yk4_A Rubredoxin, RD; electro 79.8 0.83 2.8E-05 33.1 1.9 24 304-327 2-44 (52)
99 1jm7_B BARD1, BRCA1-associated 79.7 2 6.7E-05 35.4 4.6 50 363-421 22-71 (117)
100 1wfp_A Zinc finger (AN1-like) 79.7 1.5 5.2E-05 34.1 3.5 39 362-410 24-62 (74)
101 4ayc_A E3 ubiquitin-protein li 79.3 0.61 2.1E-05 39.8 1.3 44 364-415 54-97 (138)
102 3vk6_A E3 ubiquitin-protein li 79.0 0.49 1.7E-05 39.0 0.5 45 365-416 3-48 (101)
103 2l0b_A E3 ubiquitin-protein li 78.5 1.2 4.2E-05 35.1 2.8 49 362-415 39-87 (91)
104 2ysl_A Tripartite motif-contai 78.4 2 6.8E-05 31.9 3.8 50 362-419 19-71 (73)
105 4rxn_A Rubredoxin; electron tr 78.3 1 3.5E-05 33.0 2.0 24 304-327 3-45 (54)
106 1e8j_A Rubredoxin; iron-sulfur 78.0 1.3 4.6E-05 32.0 2.6 24 304-327 3-45 (52)
107 1wfh_A Zinc finger (AN1-like) 77.3 1.9 6.6E-05 32.6 3.4 39 362-410 14-52 (64)
108 1e4u_A Transcriptional repress 77.2 2.7 9.2E-05 32.6 4.3 52 362-417 10-62 (78)
109 1dx8_A Rubredoxin; electron tr 77.1 1.2 4E-05 34.4 2.2 24 304-327 7-49 (70)
110 2csh_A Zinc finger protein 297 76.4 1.3 4.4E-05 35.0 2.4 41 365-405 39-87 (110)
111 1s24_A Rubredoxin 2; electron 76.1 1.1 3.9E-05 35.9 1.9 24 304-327 35-77 (87)
112 2ecj_A Tripartite motif-contai 76.0 2.4 8.3E-05 29.8 3.6 42 362-411 14-58 (58)
113 2ea6_A Ring finger protein 4; 76.0 1.6 5.4E-05 31.9 2.6 53 362-415 14-66 (69)
114 1yuz_A Nigerythrin; rubrythrin 75.9 1.2 4.1E-05 41.0 2.3 24 304-327 171-195 (202)
115 2ysj_A Tripartite motif-contai 75.6 2.2 7.5E-05 30.8 3.3 42 362-411 19-63 (63)
116 2xeu_A Ring finger protein 4; 75.4 0.97 3.3E-05 32.5 1.3 57 363-420 3-59 (64)
117 2rpc_A Zinc finger protein ZIC 75.3 1.5 5.1E-05 36.9 2.7 24 383-406 120-145 (155)
118 2csy_A Zinc finger protein 183 74.9 2.1 7.2E-05 32.7 3.2 47 362-416 14-60 (81)
119 3fl2_A E3 ubiquitin-protein li 74.3 1.6 5.4E-05 36.3 2.5 46 364-417 53-99 (124)
120 1x4s_A Protein FON, zinc finge 74.0 0.94 3.2E-05 33.8 0.9 27 291-318 12-40 (59)
121 1ubd_C Protein (YY1 zinc finge 74.0 1.4 4.7E-05 35.5 2.0 33 304-336 5-52 (124)
122 2vrw_B P95VAV, VAV1, proto-onc 74.0 1.4 4.7E-05 44.1 2.4 43 362-411 356-398 (406)
123 3h0g_I DNA-directed RNA polyme 73.1 6.1 0.00021 32.8 5.8 31 363-393 72-110 (113)
124 2gli_A Protein (five-finger GL 73.0 3.3 0.00011 34.5 4.2 76 304-406 34-123 (155)
125 2lv2_A Insulinoma-associated p 72.5 2 7E-05 33.7 2.6 34 304-337 28-75 (85)
126 2ckl_B Ubiquitin ligase protei 72.3 1.2 4E-05 39.1 1.2 45 364-415 55-100 (165)
127 2yqq_A Zinc finger HIT domain- 72.3 1.1 3.8E-05 33.1 0.9 23 292-318 14-37 (56)
128 4gzn_C ZFP-57, zinc finger pro 72.1 2.2 7.4E-05 31.2 2.5 34 304-337 4-51 (60)
129 3uk3_C Zinc finger protein 217 72.0 1.9 6.4E-05 29.6 2.0 33 304-336 4-50 (57)
130 3l11_A E3 ubiquitin-protein li 71.6 1.5 5.1E-05 35.9 1.7 44 364-415 16-60 (115)
131 3hct_A TNF receptor-associated 71.5 1.2 4.2E-05 36.8 1.1 48 363-418 18-66 (118)
132 1twf_I B12.6, DNA-directed RNA 71.3 2.7 9.2E-05 35.5 3.2 31 363-393 72-110 (122)
133 3mpx_A FYVE, rhogef and PH dom 71.2 0.84 2.9E-05 45.9 0.0 49 361-413 373-428 (434)
134 1tf6_A Protein (transcription 70.2 3.4 0.00012 35.9 3.8 93 304-413 42-172 (190)
135 1v87_A Deltex protein 2; ring- 70.1 2.7 9.4E-05 34.1 3.0 51 363-413 25-90 (114)
136 1tf6_A Protein (transcription 69.1 3.8 0.00013 35.6 3.8 91 304-413 12-144 (190)
137 1a1h_A QGSR zinc finger peptid 68.8 0.8 2.7E-05 34.6 -0.6 69 320-406 6-85 (90)
138 2lt7_A Transcriptional regulat 67.9 0.59 2E-05 39.6 -1.7 72 317-406 21-101 (133)
139 2ct2_A Tripartite motif protei 67.7 4.8 0.00016 30.7 3.8 51 362-416 14-67 (88)
140 2lcq_A Putative toxin VAPC6; P 66.5 2.3 7.9E-05 37.4 1.9 26 304-329 132-159 (165)
141 2ee8_A Protein ODD-skipped-rel 66.4 7.3 0.00025 30.2 4.7 34 304-337 17-64 (106)
142 2ecg_A Baculoviral IAP repeat- 65.7 3.4 0.00012 31.2 2.5 42 364-417 26-68 (75)
143 2ecl_A Ring-box protein 2; RNF 65.2 5.1 0.00017 30.8 3.4 54 362-415 14-74 (81)
144 1wfl_A Zinc finger protein 216 65.1 4.1 0.00014 31.7 2.8 39 362-410 24-62 (74)
145 1g25_A CDK-activating kinase a 65.1 4 0.00014 29.6 2.7 55 363-421 3-59 (65)
146 2jmo_A Parkin; IBR, E3 ligase, 65.0 4.7 0.00016 31.4 3.2 43 363-409 25-74 (80)
147 2wbs_A Krueppel-like factor 4; 64.9 2.3 7.9E-05 31.9 1.4 69 320-406 7-88 (89)
148 1bbo_A Human enhancer-binding 64.2 3.4 0.00012 28.3 2.0 33 305-337 2-48 (57)
149 1x6e_A Zinc finger protein 24; 63.9 4.2 0.00014 29.5 2.6 34 304-337 14-61 (72)
150 2el4_A Zinc finger protein 268 63.8 3 0.0001 27.3 1.7 25 383-407 12-36 (46)
151 1twf_L ABC10-alpha, DNA-direct 63.5 5.2 0.00018 30.7 3.1 28 381-413 26-53 (70)
152 2lvu_A Zinc finger and BTB dom 67.2 1.5 5.1E-05 24.9 0.0 24 383-406 2-25 (26)
153 2gmg_A Hypothetical protein PF 62.9 3.6 0.00012 34.1 2.2 29 304-332 67-98 (105)
154 1x4w_A Hypothetical protein FL 62.9 3.8 0.00013 31.3 2.2 40 362-410 14-55 (67)
155 1znf_A 31ST zinc finger from X 62.2 2.8 9.7E-05 23.7 1.1 24 384-407 2-25 (27)
156 2c2l_A CHIP, carboxy terminus 62.1 5 0.00017 37.2 3.4 53 363-423 208-261 (281)
157 1twf_L ABC10-alpha, DNA-direct 62.0 4.4 0.00015 31.1 2.5 23 304-326 28-53 (70)
158 1rik_A E6APC1 peptide; E6-bind 61.9 2.4 8.1E-05 24.5 0.7 25 383-407 2-26 (29)
159 2m0d_A Zinc finger and BTB dom 61.8 2.4 8.3E-05 24.4 0.8 25 383-407 3-27 (30)
160 2m0e_A Zinc finger and BTB dom 61.5 1.5 5E-05 25.2 -0.3 24 383-406 2-25 (29)
161 2adr_A ADR1; transcription reg 61.5 3.8 0.00013 28.4 1.9 34 304-337 2-49 (60)
162 2jrp_A Putative cytoplasmic pr 60.9 3 0.0001 33.0 1.4 33 295-328 8-41 (81)
163 2apo_B Ribosome biogenesis pro 60.9 4.3 0.00015 30.3 2.1 25 305-331 7-31 (60)
164 2cot_A Zinc finger protein 435 59.6 7 0.00024 28.6 3.2 34 304-337 18-65 (77)
165 2kvf_A Zinc finger and BTB dom 59.5 3.3 0.00011 23.7 1.1 25 383-407 3-27 (28)
166 1z6u_A NP95-like ring finger p 59.1 5 0.00017 34.8 2.6 47 364-418 79-126 (150)
167 1x5w_A Zinc finger protein 64, 59.1 5.6 0.00019 28.6 2.5 34 304-337 9-56 (70)
168 2ctu_A Zinc finger protein 483 59.0 2.3 8E-05 30.4 0.4 10 304-313 18-27 (73)
169 2gqj_A Zinc finger protein KIA 58.9 2 6.7E-05 33.7 -0.0 37 304-340 24-78 (98)
170 3hcs_A TNF receptor-associated 58.9 3 0.0001 36.5 1.1 48 363-418 18-66 (170)
171 2ctd_A Zinc finger protein 512 58.5 7 0.00024 30.8 3.2 34 304-337 34-81 (96)
172 2ytn_A Zinc finger protein 347 58.3 4.9 0.00017 26.2 1.9 25 383-407 12-36 (46)
173 2epw_A Zinc finger protein 268 58.2 3.4 0.00012 27.0 1.1 24 383-406 12-35 (46)
174 2jp9_A Wilms tumor 1; DNA bind 58.0 1.3 4.5E-05 35.2 -1.3 77 318-413 6-104 (119)
175 2em0_A Zinc finger protein 224 57.7 4.2 0.00014 26.6 1.5 24 383-406 12-35 (46)
176 3mjh_B Early endosome antigen 57.5 3.8 0.00013 27.1 1.2 8 304-311 5-12 (34)
177 2csz_A Synaptotagmin-like prot 57.5 5.4 0.00019 31.2 2.3 46 361-409 23-68 (76)
178 2eop_A Zinc finger protein 268 57.2 4.4 0.00015 26.4 1.5 24 383-406 12-35 (46)
179 2lce_A B-cell lymphoma 6 prote 56.9 4.8 0.00016 29.3 1.9 34 304-337 17-64 (74)
180 1pft_A TFIIB, PFTFIIBN; N-term 56.8 2.6 8.9E-05 29.7 0.3 25 304-328 5-34 (50)
181 2ytg_A ZFP-95, zinc finger pro 56.8 4.5 0.00015 26.4 1.6 24 383-406 12-35 (46)
182 2ema_A Zinc finger protein 347 56.4 3.9 0.00013 26.8 1.2 24 383-406 12-35 (46)
183 2lvr_A Zinc finger and BTB dom 61.1 2.3 8E-05 24.6 0.0 25 383-407 3-27 (30)
184 3ky9_A Proto-oncogene VAV; cal 56.1 5.2 0.00018 42.1 2.6 57 337-413 516-572 (587)
185 2ea5_A Cell growth regulator w 55.8 9.2 0.00032 28.5 3.3 44 362-417 14-58 (68)
186 2lvt_A Zinc finger and BTB dom 60.7 2.4 8.3E-05 24.6 0.0 25 383-407 2-26 (29)
187 2kfq_A FP1; protein, de novo p 55.7 2.8 9.6E-05 25.4 0.3 25 383-407 2-26 (32)
188 2gmg_A Hypothetical protein PF 55.2 5.7 0.0002 32.9 2.2 26 365-393 69-94 (105)
189 2d9h_A Zinc finger protein 692 55.2 6.9 0.00023 28.7 2.5 39 304-342 7-64 (78)
190 2elz_A Zinc finger protein 224 55.1 4.6 0.00016 26.4 1.4 24 383-406 12-35 (46)
191 2eq0_A Zinc finger protein 347 55.0 5.1 0.00017 26.2 1.6 25 383-407 12-36 (46)
192 2fc7_A ZZZ3 protein; structure 54.7 5.7 0.00019 31.3 2.0 31 363-399 21-56 (82)
193 2em5_A ZFP-95, zinc finger pro 54.7 6.4 0.00022 25.7 2.1 24 383-406 12-35 (46)
194 2ecn_A Ring finger protein 141 54.5 3.2 0.00011 30.5 0.5 45 362-415 14-58 (70)
195 1paa_A Yeast transcription fac 54.4 5 0.00017 23.1 1.3 24 384-407 3-27 (30)
196 2qip_A Protein of unknown func 54.3 9.3 0.00032 33.3 3.6 61 167-239 92-154 (165)
197 2el6_A Zinc finger protein 268 54.2 4.6 0.00016 26.5 1.2 24 383-406 12-35 (46)
198 2ebt_A Krueppel-like factor 5; 54.2 2.6 8.8E-05 32.3 -0.1 67 322-406 21-98 (100)
199 4ap4_A E3 ubiquitin ligase RNF 54.1 3.3 0.00011 34.0 0.5 57 362-419 6-62 (133)
200 2epz_A Zinc finger protein 28 54.1 5.2 0.00018 26.1 1.5 24 383-406 12-35 (46)
201 2ytq_A Zinc finger protein 268 54.1 6.5 0.00022 25.7 2.0 24 383-406 12-35 (46)
202 2kvg_A Zinc finger and BTB dom 54.1 3.7 0.00013 23.6 0.6 24 383-406 3-26 (27)
203 2ene_A Zinc finger protein 347 54.1 6.9 0.00023 25.5 2.1 25 383-407 12-36 (46)
204 2ep0_A Zinc finger protein 28 53.9 5.6 0.00019 25.9 1.7 24 383-406 12-35 (46)
205 2em9_A Zinc finger protein 224 53.1 5.2 0.00018 26.0 1.4 24 383-406 12-35 (46)
206 2en1_A Zinc finger protein 224 53.0 4.2 0.00014 26.6 0.9 24 383-406 12-35 (46)
207 3cw1_L U1 small nuclear ribonu 52.6 3 0.0001 32.7 0.1 16 391-406 3-19 (77)
208 2eoe_A Zinc finger protein 347 52.5 4.2 0.00014 26.5 0.8 24 383-406 12-35 (46)
209 2ysp_A Zinc finger protein 224 51.9 5 0.00017 26.2 1.1 24 383-406 12-35 (46)
210 2en8_A Zinc finger protein 224 51.9 7.3 0.00025 25.3 2.0 24 383-406 12-35 (46)
211 2drp_A Protein (tramtrack DNA- 51.8 8.5 0.00029 27.0 2.5 33 304-336 10-58 (66)
212 2dlk_A Novel protein; ZF-C2H2 51.8 4 0.00014 29.9 0.6 55 321-393 12-78 (79)
213 3j21_g 50S ribosomal protein L 51.7 9.3 0.00032 27.5 2.5 24 304-327 14-37 (51)
214 2kvh_A Zinc finger and BTB dom 51.7 3.6 0.00012 23.4 0.3 24 383-406 3-26 (27)
215 1x5w_A Zinc finger protein 64, 51.5 6.2 0.00021 28.3 1.7 20 384-403 38-57 (70)
216 2ct1_A Transcriptional repress 51.2 8.9 0.00031 28.0 2.6 38 304-341 15-70 (77)
217 2m0f_A Zinc finger and BTB dom 51.1 2.3 7.9E-05 24.3 -0.6 24 383-406 2-25 (29)
218 1rmd_A RAG1; V(D)J recombinati 51.0 6.2 0.00021 32.1 1.8 47 363-417 23-70 (116)
219 2em7_A Zinc finger protein 224 50.9 5.9 0.0002 25.8 1.4 24 383-406 12-35 (46)
220 2adr_A ADR1; transcription reg 50.5 5.8 0.0002 27.4 1.3 42 365-406 4-54 (60)
221 1vd4_A Transcription initiatio 50.5 5.3 0.00018 28.5 1.1 28 304-331 14-52 (62)
222 1p7a_A BF3, BKLF, kruppel-like 50.4 5.1 0.00017 24.7 0.9 24 383-406 11-34 (37)
223 2elv_A Zinc finger protein 406 50.3 5.5 0.00019 24.4 1.1 25 383-407 9-33 (36)
224 2emf_A Zinc finger protein 484 50.0 8.5 0.00029 25.1 2.1 24 383-406 12-35 (46)
225 1llm_C Chimera of ZIF23-GCN4; 49.9 9.1 0.00031 28.8 2.5 37 304-340 3-55 (88)
226 2epr_A POZ-, at HOOK-, and zin 49.8 5.7 0.0002 26.4 1.2 30 383-412 12-47 (48)
227 2y1n_A E3 ubiquitin-protein li 49.8 4.6 0.00016 40.8 0.9 47 363-417 332-379 (389)
228 2eml_A Zinc finger protein 28 49.6 5.6 0.00019 26.0 1.1 24 383-406 12-35 (46)
229 2ely_A Zinc finger protein 224 49.6 4.4 0.00015 26.5 0.5 24 383-406 12-35 (46)
230 2ytr_A Zinc finger protein 347 49.5 6.9 0.00024 25.4 1.5 24 383-406 12-35 (46)
231 2rpc_A Zinc finger protein ZIC 49.3 12 0.00042 31.0 3.5 85 317-413 24-130 (155)
232 2eme_A Zinc finger protein 473 48.9 6.1 0.00021 25.7 1.2 24 383-406 12-35 (46)
233 2kmk_A Zinc finger protein GFI 48.8 10 0.00035 27.6 2.5 33 304-336 29-75 (82)
234 2wbt_A B-129; zinc finger; 2.7 48.5 12 0.0004 30.2 3.1 34 304-337 74-119 (129)
235 1wjp_A Zinc finger protein 295 48.5 3.4 0.00012 32.5 -0.3 25 383-407 69-94 (107)
236 1srk_A Zinc finger protein ZFP 48.5 5 0.00017 24.3 0.6 25 383-407 7-31 (35)
237 2yt9_A Zinc finger-containing 48.4 12 0.00041 28.2 3.0 34 304-337 35-84 (95)
238 2ytd_A Zinc finger protein 473 48.4 3.8 0.00013 26.8 0.0 24 383-406 12-35 (46)
239 1zbd_B Rabphilin-3A; G protein 47.7 9.4 0.00032 32.8 2.4 39 362-403 54-92 (134)
240 2yqq_A Zinc finger HIT domain- 47.7 9.4 0.00032 28.0 2.1 34 363-405 12-45 (56)
241 2csh_A Zinc finger protein 297 47.5 16 0.00055 28.4 3.7 33 304-337 10-56 (110)
242 2zet_C Melanophilin; complex, 47.4 8 0.00027 34.0 2.0 37 362-401 67-103 (153)
243 2aus_D NOP10, ribosome biogene 47.2 7.8 0.00027 28.9 1.6 25 305-331 6-30 (60)
244 4gzn_C ZFP-57, zinc finger pro 46.9 6.4 0.00022 28.6 1.1 44 364-407 5-56 (60)
245 2els_A Zinc finger protein 406 46.8 3.2 0.00011 25.5 -0.5 24 383-406 9-32 (36)
246 1ard_A Yeast transcription fac 46.6 9.5 0.00032 21.5 1.7 20 318-337 2-21 (29)
247 2dmd_A Zinc finger protein 64, 46.5 12 0.0004 28.3 2.6 34 304-337 36-83 (96)
248 2emk_A Zinc finger protein 28 46.2 4.3 0.00015 26.6 0.0 24 383-406 12-35 (46)
249 1a1h_A QGSR zinc finger peptid 46.1 11 0.00039 27.9 2.5 33 304-336 34-80 (90)
250 2eoq_A Zinc finger protein 224 46.0 5.7 0.00019 25.9 0.6 24 383-406 12-35 (46)
251 2kre_A Ubiquitin conjugation f 46.0 14 0.00049 29.6 3.2 54 362-423 28-81 (100)
252 2ep2_A Zinc finger protein 484 45.6 9.4 0.00032 24.8 1.7 24 383-406 12-35 (46)
253 1x6h_A Transcriptional repress 45.4 13 0.00044 27.3 2.7 19 319-337 16-34 (86)
254 2ytk_A Zinc finger protein 347 45.1 5.5 0.00019 26.0 0.4 24 383-406 12-35 (46)
255 2enc_A Zinc finger protein 224 45.0 6.4 0.00022 25.7 0.8 24 383-406 12-35 (46)
256 2e72_A POGO transposable eleme 45.0 8.2 0.00028 27.5 1.3 14 380-393 9-22 (49)
257 3dpl_R Ring-box protein 1; ubi 44.9 10 0.00035 31.0 2.2 52 363-414 37-98 (106)
258 2epx_A Zinc finger protein 28 44.4 9.7 0.00033 24.7 1.6 24 383-406 12-36 (47)
259 1klr_A Zinc finger Y-chromosom 44.2 12 0.00041 21.1 1.9 20 318-337 2-21 (30)
260 2e5r_A Dystrobrevin alpha; ZZ 44.1 14 0.00049 27.4 2.7 30 364-399 12-43 (63)
261 2ytj_A Zinc finger protein 484 44.0 6.7 0.00023 25.5 0.7 24 383-406 12-35 (46)
262 1x6e_A Zinc finger protein 24; 43.6 6.1 0.00021 28.6 0.5 23 383-405 42-64 (72)
263 2vje_B MDM4 protein; proto-onc 43.6 6.6 0.00023 28.7 0.7 48 363-416 7-55 (63)
264 1qxf_A GR2, 30S ribosomal prot 43.6 8.1 0.00028 29.3 1.2 27 306-332 9-40 (66)
265 1z60_A TFIIH basal transcripti 43.6 6.1 0.00021 29.3 0.5 18 298-315 24-41 (59)
266 2kr4_A Ubiquitin conjugation f 43.1 13 0.00045 28.8 2.5 52 362-421 13-64 (85)
267 4gnr_A ABC transporter substra 43.0 32 0.0011 32.4 5.7 62 145-219 13-74 (353)
268 2jne_A Hypothetical protein YF 42.4 6.7 0.00023 32.1 0.6 34 294-328 37-71 (101)
269 2yu4_A E3 SUMO-protein ligase 42.3 7.8 0.00027 30.6 1.0 44 363-413 7-58 (94)
270 3k1l_B Fancl; UBC, ring, RWD, 42.0 22 0.00076 35.6 4.4 52 361-414 306-370 (381)
271 2cot_A Zinc finger protein 435 41.9 12 0.0004 27.3 1.9 45 363-407 18-70 (77)
272 1njq_A Superman protein; zinc- 41.8 7.8 0.00027 24.3 0.8 25 383-407 6-30 (39)
273 2kdx_A HYPA, hydrogenase/ureas 41.7 13 0.00046 30.8 2.4 24 304-327 73-99 (119)
274 2elq_A Zinc finger protein 406 41.4 6.2 0.00021 24.1 0.2 25 383-407 9-33 (36)
275 2epq_A POZ-, at HOOK-, and zin 41.3 9.8 0.00034 24.6 1.3 29 383-411 10-44 (45)
276 2eos_A B-cell lymphoma 6 prote 41.1 12 0.0004 23.8 1.6 25 383-407 11-35 (42)
277 1x4v_A Hypothetical protein LO 40.9 19 0.00065 27.0 2.9 38 363-410 12-51 (63)
278 2eod_A TNF receptor-associated 40.0 12 0.00041 26.6 1.7 34 304-337 10-56 (66)
279 1f2i_G Fusion of N-terminal 17 39.7 16 0.00056 26.1 2.4 34 304-337 19-68 (73)
280 1m3v_A FLIN4, fusion of the LI 39.7 9.8 0.00033 31.4 1.3 31 390-420 54-84 (122)
281 2ej4_A Zinc finger protein ZIC 39.5 12 0.0004 28.3 1.6 57 320-406 27-85 (95)
282 2elx_A Zinc finger protein 406 39.3 7 0.00024 23.5 0.2 25 383-407 7-31 (35)
283 2elt_A Zinc finger protein 406 39.2 5.2 0.00018 24.4 -0.4 24 383-406 9-32 (36)
284 2enf_A Zinc finger protein 347 38.7 10 0.00035 24.6 1.0 25 383-407 12-36 (46)
285 2enh_A Zinc finger protein 28 38.7 11 0.00039 24.4 1.2 25 383-407 12-36 (46)
286 1rim_A E6APC2 peptide; E6-bind 38.7 15 0.00051 22.1 1.8 20 318-337 2-21 (33)
287 2ytb_A Zinc finger protein 32; 38.7 10 0.00036 23.8 1.1 25 383-407 11-35 (42)
288 2eps_A POZ-, at HOOK-, and zin 38.5 24 0.00082 23.9 3.0 20 318-337 12-31 (54)
289 2lcq_A Putative toxin VAPC6; P 38.4 11 0.00038 32.9 1.5 25 364-392 133-157 (165)
290 2ab3_A ZNF29; zinc finger prot 38.4 7 0.00024 22.2 0.1 24 383-406 2-27 (29)
291 4a0k_B E3 ubiquitin-protein li 38.3 7.4 0.00025 32.6 0.3 51 363-413 48-108 (117)
292 2pd2_A Hypothetical protein ST 38.3 47 0.0016 26.2 5.2 57 170-229 12-71 (108)
293 2emp_A Zinc finger protein 347 38.1 18 0.00063 23.3 2.3 29 383-411 12-46 (46)
294 2ytm_A Zinc finger protein 28 37.9 4.4 0.00015 26.6 -1.0 23 383-405 12-34 (46)
295 2emh_A Zinc finger protein 484 37.9 14 0.00049 23.8 1.7 22 383-404 12-33 (46)
296 2yts_A Zinc finger protein 484 37.5 12 0.00039 24.2 1.1 25 383-407 12-36 (46)
297 2eoo_A ZFP-95, zinc finger pro 37.4 16 0.00054 23.7 1.8 23 383-405 12-34 (46)
298 1wgm_A Ubiquitin conjugation f 37.3 24 0.00082 28.2 3.2 52 363-422 22-74 (98)
299 2yu8_A Zinc finger protein 347 37.3 18 0.0006 23.4 2.1 23 383-405 12-34 (46)
300 4ic3_A E3 ubiquitin-protein li 37.3 15 0.00053 27.4 1.9 41 364-416 25-66 (74)
301 2yso_A ZFP-95, zinc finger pro 37.2 16 0.00054 23.6 1.8 24 383-406 12-35 (46)
302 2em8_A Zinc finger protein 224 37.2 16 0.00056 23.6 1.9 29 383-411 12-46 (46)
303 2emy_A Zinc finger protein 268 37.1 16 0.00054 23.6 1.8 24 383-406 12-35 (46)
304 2ept_A Zinc finger protein 32; 37.1 15 0.00051 23.1 1.6 25 383-407 10-34 (41)
305 1nj3_A NPL4; NZF domain, rubre 37.1 25 0.00087 22.1 2.7 25 304-328 6-30 (31)
306 1ubd_C Protein (YY1 zinc finge 36.7 27 0.00094 27.5 3.6 77 318-413 5-102 (124)
307 1wim_A KIAA0161 protein; ring 36.7 11 0.00037 29.6 1.0 47 363-414 5-61 (94)
308 1x4s_A Protein FON, zinc finge 36.6 14 0.00049 27.4 1.6 35 363-403 11-46 (59)
309 1tot_A CREB-binding protein; z 36.5 9.2 0.00031 27.4 0.5 30 363-399 6-36 (52)
310 2lv2_A Insulinoma-associated p 36.4 13 0.00045 28.9 1.4 42 365-406 30-80 (85)
311 3iuf_A Zinc finger protein UBI 36.3 10 0.00036 25.3 0.8 25 383-407 7-32 (48)
312 2emm_A ZFP-95, zinc finger pro 36.0 20 0.00067 23.0 2.1 24 383-406 12-35 (46)
313 2eoy_A Zinc finger protein 473 35.9 17 0.00058 23.5 1.8 25 383-407 12-36 (46)
314 2emg_A Zinc finger protein 484 35.9 12 0.0004 24.3 0.9 25 383-407 12-36 (46)
315 2vje_A E3 ubiquitin-protein li 35.8 13 0.00043 27.3 1.2 48 363-416 8-56 (64)
316 3knv_A TNF receptor-associated 35.2 6.7 0.00023 33.6 -0.5 43 363-413 31-74 (141)
317 2epu_A Zinc finger protein 32; 35.2 10 0.00035 24.5 0.6 25 383-407 12-36 (45)
318 2em6_A Zinc finger protein 224 34.9 13 0.00044 24.2 1.0 25 383-407 12-36 (46)
319 3f2b_A DNA-directed DNA polyme 34.9 18 0.0006 41.1 2.7 26 304-329 502-538 (1041)
320 2emi_A Zinc finger protein 484 34.8 11 0.00037 24.4 0.6 25 383-407 12-36 (46)
321 2eq4_A Zinc finger protein 224 34.5 20 0.0007 23.0 2.0 24 383-406 12-35 (46)
322 2eon_A ZFP-95, zinc finger pro 34.5 14 0.00049 23.9 1.2 25 383-407 12-36 (46)
323 3j20_W 30S ribosomal protein S 34.5 14 0.00048 27.8 1.2 27 306-332 17-48 (63)
324 1y7p_A Hypothetical protein AF 34.4 56 0.0019 30.4 5.6 56 165-230 127-182 (223)
325 2em2_A Zinc finger protein 28 34.4 8.5 0.00029 25.1 0.0 24 383-406 12-35 (46)
326 2epv_A Zinc finger protein 268 34.3 11 0.00037 24.3 0.6 25 383-407 12-36 (44)
327 2ytf_A Zinc finger protein 268 34.2 12 0.00042 24.1 0.8 25 383-407 12-36 (46)
328 2kdx_A HYPA, hydrogenase/ureas 34.1 23 0.0008 29.3 2.8 27 382-414 72-99 (119)
329 4ayb_P DNA-directed RNA polyme 34.0 19 0.00064 25.6 1.7 25 304-328 3-33 (48)
330 2en6_A Zinc finger protein 268 33.8 18 0.00061 23.3 1.6 23 383-405 12-34 (46)
331 2yu5_A Zinc finger protein 473 33.4 11 0.00039 24.1 0.6 25 383-407 12-36 (44)
332 3iz6_X 40S ribosomal protein S 33.2 22 0.00075 28.3 2.2 27 305-331 37-68 (86)
333 2eof_A Zinc finger protein 268 33.1 9.7 0.00033 24.3 0.2 25 383-407 12-36 (44)
334 1sp2_A SP1F2; zinc finger, tra 33.1 14 0.00049 21.5 0.9 24 384-407 3-28 (31)
335 2emb_A Zinc finger protein 473 32.8 13 0.00045 23.8 0.8 25 383-407 12-36 (44)
336 2yti_A Zinc finger protein 347 32.7 13 0.00044 24.1 0.7 25 383-407 12-36 (46)
337 2ct1_A Transcriptional repress 32.7 20 0.0007 25.9 2.0 54 316-406 13-68 (77)
338 2elm_A Zinc finger protein 406 32.6 10 0.00035 23.5 0.2 24 383-406 9-33 (37)
339 2yrj_A Zinc finger protein 473 32.6 15 0.00052 23.6 1.1 25 383-407 12-36 (46)
340 2yth_A Zinc finger protein 224 32.6 13 0.00046 24.0 0.8 25 383-407 12-36 (46)
341 1wfe_A Riken cDNA 2310008M20 p 32.6 25 0.00086 27.9 2.5 39 362-410 24-64 (86)
342 1wys_A Riken cDNA 2310008M20 p 32.6 32 0.0011 26.6 3.1 38 363-410 14-53 (75)
343 2eoj_A Zinc finger protein 268 32.4 11 0.00039 24.0 0.4 25 383-407 12-36 (44)
344 2elr_A Zinc finger protein 406 32.3 20 0.0007 21.4 1.6 21 317-337 8-28 (36)
345 2eq1_A Zinc finger protein 347 32.2 17 0.00058 23.5 1.3 25 383-407 12-36 (46)
346 2ytp_A Zinc finger protein 484 32.1 16 0.00053 23.7 1.1 25 383-407 12-36 (46)
347 2dip_A Zinc finger SWIM domain 32.0 15 0.00051 29.9 1.1 29 363-397 31-61 (98)
348 1zfd_A SWI5; DNA binding motif 31.8 14 0.00048 21.6 0.7 25 383-407 3-29 (32)
349 2eq2_A Zinc finger protein 347 31.6 13 0.00044 24.1 0.6 25 383-407 12-36 (46)
350 2elp_A Zinc finger protein 406 31.5 19 0.00063 21.9 1.3 19 318-336 9-28 (37)
351 3ghf_A Septum site-determining 31.2 2.2E+02 0.0075 23.4 8.9 76 144-241 19-95 (120)
352 2gli_A Protein (five-finger GL 31.2 46 0.0016 27.2 4.2 70 317-404 66-151 (155)
353 1l1s_A Hypothetical protein MT 31.2 67 0.0023 25.7 5.1 56 170-228 17-75 (113)
354 2yte_A Zinc finger protein 473 30.9 22 0.00074 22.2 1.6 21 317-337 9-29 (42)
355 3mkr_B Coatomer subunit alpha; 30.9 21 0.00071 35.1 2.2 30 304-333 278-309 (320)
356 2epc_A Zinc finger protein 32; 30.8 12 0.0004 23.6 0.3 24 383-406 11-34 (42)
357 2ytt_A Zinc finger protein 473 30.6 21 0.00071 23.1 1.5 29 383-411 12-46 (46)
358 2en7_A Zinc finger protein 268 30.6 15 0.00052 23.3 0.8 25 383-407 12-36 (44)
359 1mio_B Nitrogenase molybdenum 30.5 3.2E+02 0.011 27.4 11.2 90 190-286 312-416 (458)
360 2emx_A Zinc finger protein 268 30.5 25 0.00086 22.3 1.9 24 383-406 10-33 (44)
361 2ent_A Krueppel-like factor 15 30.4 21 0.00073 23.0 1.6 24 383-406 12-37 (48)
362 2ep3_A Zinc finger protein 484 30.3 18 0.0006 23.4 1.1 25 383-407 12-36 (46)
363 2el5_A Zinc finger protein 268 30.2 15 0.0005 23.2 0.6 25 383-407 10-34 (42)
364 3nw0_A Non-structural maintena 30.0 27 0.00092 32.6 2.7 44 363-413 180-225 (238)
365 2jun_A Midline-1; B-BOX, TRIM, 29.9 20 0.00067 28.3 1.5 36 363-403 3-38 (101)
366 2ct0_A Non-SMC element 1 homol 29.9 69 0.0024 24.4 4.6 45 363-414 15-61 (74)
367 3u5c_b RP61, YS20, 40S ribosom 29.8 24 0.0008 27.9 1.9 27 305-331 35-66 (82)
368 2eq3_A Zinc finger protein 347 29.8 13 0.00046 23.9 0.4 25 383-407 12-36 (46)
369 1jzt_A Hypothetical 27.5 kDa p 29.1 99 0.0034 28.8 6.5 54 191-246 59-117 (246)
370 2ep1_A Zinc finger protein 484 29.0 14 0.00047 23.9 0.4 25 383-407 12-36 (46)
371 1wd2_A Ariadne-1 protein homol 28.7 40 0.0014 24.7 2.9 35 363-399 6-42 (60)
372 3mv2_A Coatomer subunit alpha; 28.5 24 0.00082 34.7 2.1 42 291-332 270-317 (325)
373 3mvn_A UDP-N-acetylmuramate:L- 28.5 1E+02 0.0036 26.3 6.1 31 234-264 108-138 (163)
374 2k0a_A PRE-mRNA-splicing facto 28.4 21 0.00073 29.4 1.5 30 291-327 9-38 (109)
375 1wik_A Thioredoxin-like protei 28.4 2E+02 0.0067 22.4 7.4 36 207-242 32-67 (109)
376 2elo_A Zinc finger protein 406 28.3 21 0.00071 21.6 1.1 20 318-337 9-28 (37)
377 2en2_A B-cell lymphoma 6 prote 28.3 9.9 0.00034 24.0 -0.5 24 383-406 11-34 (42)
378 1q1a_A HST2 protein; ternary c 28.2 43 0.0015 32.0 3.9 34 292-328 127-173 (289)
379 2xzm_6 RPS27E; ribosome, trans 28.0 20 0.00069 28.2 1.2 27 306-332 34-65 (81)
380 1dl6_A Transcription factor II 27.7 23 0.00079 25.8 1.4 25 305-329 12-41 (58)
381 3na7_A HP0958; flagellar bioge 27.2 11 0.00039 35.3 -0.4 31 363-393 198-232 (256)
382 2pv0_B DNA (cytosine-5)-methyl 27.1 18 0.0006 36.5 0.9 45 362-414 92-148 (386)
383 1fv5_A First zinc finger of U- 26.7 23 0.00077 23.0 1.1 22 316-337 6-27 (36)
384 2o8n_A APOA-I binding protein; 26.5 80 0.0028 29.9 5.4 53 191-245 80-136 (265)
385 3o70_A PHD finger protein 13; 26.5 33 0.0011 25.7 2.1 61 339-412 2-65 (68)
386 3htk_C E3 SUMO-protein ligase 26.2 17 0.0006 34.8 0.6 48 362-416 180-231 (267)
387 3b08_B Ranbp-type and C3HC4-ty 25.9 31 0.0011 25.9 1.9 28 304-331 8-35 (64)
388 3t6p_A Baculoviral IAP repeat- 25.7 34 0.0012 33.8 2.7 42 363-416 295-337 (345)
389 3jyw_9 60S ribosomal protein L 25.7 32 0.0011 26.5 1.9 26 304-329 26-55 (72)
390 2f42_A STIP1 homology and U-bo 25.4 24 0.00084 31.6 1.4 50 364-421 107-157 (179)
391 2i5o_A DNA polymerase ETA; zin 25.4 26 0.00091 23.7 1.3 11 304-314 9-19 (39)
392 2ctd_A Zinc finger protein 512 25.3 30 0.001 26.9 1.9 42 365-406 36-86 (96)
393 2zjr_Z 50S ribosomal protein L 25.2 28 0.00097 25.7 1.5 21 304-326 30-51 (60)
394 3h5l_A Putative branched-chain 24.8 1.3E+02 0.0044 28.9 6.8 8 145-152 20-27 (419)
395 1wg2_A Zinc finger (AN1-like) 24.3 31 0.0011 26.0 1.6 22 294-317 20-41 (64)
396 2eov_A Zinc finger protein 484 24.1 35 0.0012 21.8 1.7 21 317-337 11-31 (46)
397 2epp_A POZ-, at HOOK-, and zin 24.0 15 0.00052 27.3 -0.2 26 382-407 12-37 (66)
398 1vq8_Z 50S ribosomal protein L 23.9 21 0.00073 28.1 0.6 26 304-329 27-56 (83)
399 1q0q_A 1-deoxy-D-xylulose 5-ph 23.8 2.8E+02 0.0095 28.0 8.9 62 192-258 10-74 (406)
400 2en3_A ZFP-95, zinc finger pro 23.8 29 0.00099 22.2 1.2 20 318-337 12-31 (46)
401 3cc2_Z 50S ribosomal protein L 23.6 25 0.00085 29.6 1.0 26 304-329 60-89 (116)
402 2eoh_A Zinc finger protein 28 23.3 36 0.0012 21.8 1.7 21 317-337 11-31 (46)
403 2eou_A Zinc finger protein 473 23.3 36 0.0012 21.6 1.7 21 317-337 11-31 (44)
404 2jny_A Uncharacterized BCR; st 23.0 25 0.00085 26.6 0.8 23 305-327 11-37 (67)
405 2ko5_A Ring finger protein Z; 22.9 16 0.00056 29.7 -0.2 34 289-328 38-71 (99)
406 3glr_A NAD-dependent deacetyla 22.9 74 0.0025 30.5 4.4 67 232-328 97-173 (285)
407 2yho_A E3 ubiquitin-protein li 22.6 29 0.00099 26.4 1.2 41 364-416 19-60 (79)
408 1qyp_A RNA polymerase II; tran 22.5 31 0.0011 24.7 1.3 31 363-393 15-53 (57)
409 2yto_A Zinc finger protein 484 22.5 30 0.001 22.2 1.1 20 318-337 12-31 (46)
410 3bcv_A Putative glycosyltransf 22.4 3.7E+02 0.013 23.0 9.0 69 190-262 34-110 (240)
411 3igf_A ALL4481 protein; two-do 22.1 1.8E+02 0.0063 28.6 7.3 134 88-243 125-265 (374)
412 2xoc_A E3 ubiquitin-protein li 22.0 37 0.0013 32.4 2.0 47 364-413 80-131 (261)
413 2em3_A Zinc finger protein 28 22.0 31 0.0011 22.1 1.1 20 318-337 12-31 (46)
414 1yui_A GAGA-factor; complex (D 21.9 15 0.00052 24.9 -0.5 24 383-406 24-47 (54)
415 2emj_A Zinc finger protein 28 21.9 31 0.0011 22.1 1.1 20 318-337 12-31 (46)
416 1wfh_A Zinc finger (AN1-like) 21.9 37 0.0013 25.5 1.6 22 294-317 20-41 (64)
417 2lk0_A RNA-binding protein 5; 21.8 68 0.0023 20.4 2.7 24 304-327 5-28 (32)
418 1pq4_A Periplasmic binding pro 21.6 1E+02 0.0036 29.1 5.2 45 204-248 222-266 (291)
419 2eow_A Zinc finger protein 347 21.6 32 0.0011 22.0 1.1 20 318-337 12-31 (46)
420 3ipc_A ABC transporter, substr 21.3 1.6E+02 0.0054 27.3 6.4 14 171-184 22-35 (356)
421 2js4_A UPF0434 protein BB2007; 21.2 28 0.00096 26.5 0.8 24 304-327 8-35 (70)
422 3u50_C Telomerase-associated p 21.1 28 0.00097 31.1 1.0 29 365-398 44-72 (172)
423 2en9_A Zinc finger protein 28 21.1 43 0.0015 21.4 1.7 21 317-337 11-31 (46)
424 3a9j_C Mitogen-activated prote 21.0 64 0.0022 20.6 2.5 24 304-327 8-31 (34)
425 1jx7_A Hypothetical protein YC 21.0 93 0.0032 24.4 4.0 63 165-230 12-83 (117)
426 3ju3_A Probable 2-oxoacid ferr 20.8 1E+02 0.0034 25.2 4.3 65 192-260 15-85 (118)
427 2j7j_A Transcription factor II 20.7 58 0.002 23.4 2.5 32 305-336 2-51 (85)
428 2emz_A ZFP-95, zinc finger pro 20.6 45 0.0015 21.3 1.7 21 317-337 11-31 (46)
429 2eom_A ZFP-95, zinc finger pro 20.4 45 0.0016 21.3 1.7 21 317-337 11-31 (46)
430 2eox_A Zinc finger protein 473 20.4 30 0.001 21.9 0.8 20 318-337 12-31 (44)
431 3au8_A 1-deoxy-D-xylulose 5-ph 20.0 3E+02 0.01 28.4 8.3 61 193-258 79-145 (488)
No 1
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=2.7e-28 Score=226.83 Aligned_cols=172 Identities=16% Similarity=0.251 Sum_probs=144.5
Q ss_pred cceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCHHHHHHHHhhhhcC
Q 014393 86 IRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGC 165 (425)
Q Consensus 86 iR~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~~~~i~~L~~~l~~ 165 (425)
++.+||+||+|+||.+.|+.||||+++++.+..|+.+|+++||.+++|||+|+++.|++++|+|.|+..+...|.+ +.+
T Consensus 2 ~e~lvlvlD~S~SM~~~D~~psRl~~ak~~~~~~~~~~~~~~~~d~vGLV~fa~~~a~~~~plT~d~~~i~~~L~~-l~~ 80 (192)
T 2x5n_A 2 LEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHD-LPV 80 (192)
T ss_dssp CEEEEEEECCSGGGGCTTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCCEEEEEESCHHHHHHHHTT-CCC
T ss_pred ceEEEEEEECCHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEEEcCCCcEEecCCCCCHHHHHHHHHc-CCC
Confidence 4689999999999999999999999999999999999999999999999999644699999999999999999987 578
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCc-EEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecchH---HHHHHHHHhh
Q 014393 166 SGDSSLQNALDLVQGLLSQIPSYGHR-EVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM---FICKHLCQDT 241 (425)
Q Consensus 166 ~G~tsL~~AL~~A~~~L~~~p~~~sr-eILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e~---~iLk~iA~~T 241 (425)
.|+|++++||++|...|++.+.+..+ +|||++++..+.++.++.++++.++++||+|+|||+|++. . |+++|+.+
T Consensus 81 ~g~t~l~~aL~~A~~~l~~~~~~~~~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~ 159 (192)
T 2x5n_A 81 RGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAA 159 (192)
T ss_dssp CSCCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhccccCCCceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhc
Confidence 89999999999999999997655444 5666665544567888899999999999999999999875 6 99999996
Q ss_pred C----CeEEEecCHh-HHHHHHH
Q 014393 242 G----GSYSVALDES-HFKELIM 259 (425)
Q Consensus 242 G----G~Y~~~~d~~-~L~~lL~ 259 (425)
+ +.|+...... -|.+.|.
T Consensus 160 n~~~~s~~~~~~~~~~~l~d~~~ 182 (192)
T 2x5n_A 160 NSSDSCHLVSIPPSPQLLSDLVN 182 (192)
T ss_dssp CSTTCCEEEEECCCSSCHHHHHH
T ss_pred cCCCceEEEEecCcchhHHHHHh
Confidence 5 3444333322 4555543
No 2
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.2e-26 Score=220.61 Aligned_cols=172 Identities=15% Similarity=0.172 Sum_probs=147.5
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCHHHHHHHHhhhhcCCC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSG 167 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~~~~i~~L~~~l~~~G 167 (425)
.+||+||+|.||++.|+.||||++++.++..|++.++++||.++||||+|++..+.++.|+|.|...++.+|.. +.+.|
T Consensus 5 AtViviD~S~SM~~~D~~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~~vl~plT~D~~~il~aL~~-l~~~G 83 (268)
T 4b4t_W 5 ATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHD-TQIEG 83 (268)
T ss_dssp EEEEEECCSSTTSSTTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCEEEEEEESCHHHHHHHHTT-CCCCS
T ss_pred eEEEEEECCHHHhCCCCCCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCcceeccCCcchHHHHHHHhhh-cCcCC
Confidence 58999999999999999999999999999999999999999999999999766778999999999999999976 47899
Q ss_pred cchHHHHHHHHHHHHhCCCCCCCc-EEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecch---HHHHHHHHHhhCC
Q 014393 168 DSSLQNALDLVQGLLSQIPSYGHR-EVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE---MFICKHLCQDTGG 243 (425)
Q Consensus 168 ~tsL~~AL~~A~~~L~~~p~~~sr-eILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e---~~iLk~iA~~TGG 243 (425)
+|++++||++|+..|++.+.+..+ +|||+++++.+.+++++.++++.++++||+|+|||||.+ ...|+++++..+|
T Consensus 84 ~T~l~~gL~~A~~aLk~~~~k~~~~rIIlf~ds~~~~~~~~l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~Ng 163 (268)
T 4b4t_W 84 KLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNN 163 (268)
T ss_dssp CCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHCS
T ss_pred CCChHHHHHHHHHHHHhcccCCCceEEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHHhcC
Confidence 999999999999999987665554 566667777677888899999999999999999999964 5789999998876
Q ss_pred -----eEEEe--cCHhHHHHHHHh
Q 014393 244 -----SYSVA--LDESHFKELIME 260 (425)
Q Consensus 244 -----~Y~~~--~d~~~L~~lL~~ 260 (425)
.|++. ....-|.+.|..
T Consensus 164 ~~~~~s~~v~v~~g~~~lsd~l~~ 187 (268)
T 4b4t_W 164 PQEETSHLLTVTPGPRLLYENIAS 187 (268)
T ss_dssp STTTSCEEEEECCCSSCHHHHHHT
T ss_pred CCCCceeEEEeCCCCccHHHHHhc
Confidence 45543 333346665544
No 3
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=3.2e-22 Score=185.26 Aligned_cols=170 Identities=19% Similarity=0.273 Sum_probs=139.0
Q ss_pred hccccceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCHHHHHHHHhh
Q 014393 82 QKGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMG 161 (425)
Q Consensus 82 r~GiiR~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~~~~i~~L~~ 161 (425)
++++ +++|+||.|+||...|+.|+||+.+++.+..|++.+ |.+++|||+| ++.+..+.|+|.+...+...|..
T Consensus 9 ~~~~--~iv~vlD~SgSM~~~d~~~~r~~~ak~~~~~~~~~~----~~~~v~lv~F-~~~~~~~~~~~~~~~~~~~~l~~ 81 (218)
T 3ibs_A 9 RKGV--EVIIALDISNSMLAQDVQPSRLEKAKRLISRLVDEL----DNDKVGMIVF-AGDAFTQLPITSDYISAKMFLES 81 (218)
T ss_dssp -CCC--EEEEEEECSGGGGCCSSSSCHHHHHHHHHHHHHHTC----SSCEEEEEEE-SSSEEEEEEEESCHHHHHHHHHT
T ss_pred cCCC--cEEEEEECCcCcccccCCcCHHHHHHHHHHHHHHhC----CCCeEEEEEE-CCCceEeCCCCCCHHHHHHHHHh
Confidence 4555 999999999999999999999999999999998764 4689999999 58899999999998887777765
Q ss_pred hh---cCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecch--------
Q 014393 162 KL---GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE-------- 230 (425)
Q Consensus 162 ~l---~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e-------- 230 (425)
+. .+.|+|++..||..|...|...+ ... ++|||++++...+ +++.++++.+++.+|+|++||+|.+
T Consensus 82 l~~~~~~~g~T~l~~al~~a~~~l~~~~-~~~-~~ivllTDG~~~~-~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~ 158 (218)
T 3ibs_A 82 ISPSLISKQGTAIGEAINLATRSFTPQE-GVG-RAIIVITDGENHE-GGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVE 158 (218)
T ss_dssp CCGGGCCSCSCCHHHHHHHHHTTSCSCS-SCC-EEEEEEECCTTCC-SCHHHHHHHHHTTTEEEEEEEESCTTCEECBCT
T ss_pred cCcccCCCCCCcHHHHHHHHHHHHhhCC-CCC-cEEEEEcCCCCCC-CcHHHHHHHHHhcCCEEEEEEecCCCCCccccc
Confidence 42 35789999999999999998752 233 4555554443322 3688999999999999999999973
Q ss_pred -------------------HHHHHHHHHhhCCeEEEecC-HhHHHHHHHhc
Q 014393 231 -------------------MFICKHLCQDTGGSYSVALD-ESHFKELIMEH 261 (425)
Q Consensus 231 -------------------~~iLk~iA~~TGG~Y~~~~d-~~~L~~lL~~~ 261 (425)
...|++||+.|||.|+.+.+ .+.+..++..+
T Consensus 159 g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG~~~~~~~~~~~~~~~~~~i 209 (218)
T 3ibs_A 159 GTNDYRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEI 209 (218)
T ss_dssp TSSCBCBCTTSCBCEECCCHHHHHHHHHHTEEEEEEECSSSHHHHHHHHHH
T ss_pred CCCceeEcCCCCEeEecCCHHHHHHHHHhcCCEEEECCCChHHHHHHHHHH
Confidence 57999999999999999887 66677666554
No 4
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=99.84 E-value=1.1e-22 Score=154.03 Aligned_cols=59 Identities=36% Similarity=0.975 Sum_probs=49.5
Q ss_pred CCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCC
Q 014393 344 IAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCE 412 (425)
Q Consensus 344 ~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~ 412 (425)
|++|+|++++ ....++.||||+++|++ +++|+|++|+++||+|||+||||+||+||||+
T Consensus 1 l~~f~Ev~~~-----~~~~~~~C~~C~~~~~~-----~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC~ 59 (59)
T 1z60_A 1 LDAFQEIPLE-----EYNGERFCYGCQGELKD-----QHVYVCAVCQNVFCVDCDVFVHDSLHSCPGCI 59 (59)
T ss_dssp CCSCCEEEHH-----HHCSCCEETTTTEECTT-----SEEECCTTTTCCBCHHHHHTTTTTSCSSSTTC
T ss_pred CCCccccCcc-----ccCCCCcccccCcccCC-----CccEECCccCcCcccchhHHHHhhccCCcCCC
Confidence 5799998753 22335679999999963 24699999999999999999999999999995
No 5
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=99.81 E-value=1.4e-19 Score=162.70 Aligned_cols=170 Identities=14% Similarity=0.157 Sum_probs=129.1
Q ss_pred hccccceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCHHHHHHHHhh
Q 014393 82 QKGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMG 161 (425)
Q Consensus 82 r~GiiR~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~~~~i~~L~~ 161 (425)
++++ +++++||.|+||...++ +|+..+++.+. .++. |.+++|||.| ++.+..+.|++.+...+.+.|..
T Consensus 4 ~~~~--dvv~vlD~SgSM~~~~~--~~~~~~~~~~~----~~~~--~~~~v~lv~f-~~~~~~~~~~~~~~~~~~~~l~~ 72 (182)
T 1shu_X 4 RRAF--DLYFVLDKSGSVANNWI--EIYNFVQQLAE----RFVS--PEMRLSFIVF-SSQATIILPLTGDRGKISKGLED 72 (182)
T ss_dssp BSCE--EEEEEEECSGGGGGGHH--HHHHHHHHHHH----HCCC--TTEEEEEEEE-SSSEEEEEEEECCHHHHHHHHHH
T ss_pred CCce--eEEEEEECCCCcccCHH--HHHHHHHHHHH----HhcC--CCceEEEEEe-CCCceEEECCCCCHHHHHHHHHh
Confidence 3444 99999999999986432 35555555554 4433 7899999999 58999999999998877777765
Q ss_pred hh--cCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCcc--CHHHHHHHHHhCCcEEEEEEecc-hHHHHHH
Q 014393 162 KL--GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG--DIMETIQKCKESKIRCSVIGLSA-EMFICKH 236 (425)
Q Consensus 162 ~l--~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~--~i~~ti~~akk~~I~V~vIglg~-e~~iLk~ 236 (425)
+. .+.|+|+++.||..|...|...+....+++||+++++...+.. .+.++++.+++.+|+|++||+|. +...|++
T Consensus 73 l~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~~~~~~L~~ 152 (182)
T 1shu_X 73 LKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLER 152 (182)
T ss_dssp HHTCCCCSCCCHHHHHHHHHHHHHHHTGGGSCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSSCCHHHHHH
T ss_pred cccCCCCCCchHHHHHHHHHHHHHhccCCCCCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCcCCHHHHHH
Confidence 43 4789999999999999999764322344566666554432221 23467889999999999999994 4689999
Q ss_pred HHHhhCCeEEEecCHhHHHHHHHhcC
Q 014393 237 LCQDTGGSYSVALDESHFKELIMEHA 262 (425)
Q Consensus 237 iA~~TGG~Y~~~~d~~~L~~lL~~~~ 262 (425)
||..|||.|++..+.+.|.+++.++.
T Consensus 153 ia~~~~~~~~~~~~~~~L~~~~~~i~ 178 (182)
T 1shu_X 153 IADSKEQVFPVKGGFQALKGIINSIL 178 (182)
T ss_dssp HSSSGGGEEESSSTTHHHHHHHHHHH
T ss_pred HhCCCCceEEccCCHHHHHHHHHHHH
Confidence 99999999998888888988887653
No 6
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.81 E-value=1.6e-19 Score=167.14 Aligned_cols=173 Identities=16% Similarity=0.179 Sum_probs=124.1
Q ss_pred ccccceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEee----CCCCCHHHHHHH
Q 014393 83 KGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT----DLGGSPESHIKA 158 (425)
Q Consensus 83 ~GiiR~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~ls----pLT~d~~~~i~~ 158 (425)
+++ +++|+||.|+||... ++..+++.+..|++.+...++..++|||.| ++.+..+. |++.|...+.++
T Consensus 14 ~~~--div~vlD~SgSM~~~-----~~~~~k~~~~~~i~~l~~~~~~~~v~lv~f-~~~~~~~~~~~~~~~~~~~~~~~~ 85 (223)
T 1q0p_A 14 GSM--NIYLVLDGSDSIGAS-----NFTGAKKSLVNLIEKVASYGVKPRYGLVTY-ATYPKIWVKVSEADSSNADWVTKQ 85 (223)
T ss_dssp -CE--EEEEEEECSTTTCHH-----HHHHHHHHHHHHHHHHHTTTCCCEEEEEEE-SSSEEEEECTTSGGGGCHHHHHHH
T ss_pred Cce--eEEEEEeCCCCCchH-----HHHHHHHHHHHHHHHHhcCCCCceEEEEEe-cCccceeeccccCCCCCHHHHHHH
Confidence 455 999999999999764 589999999999998877778899999999 58899988 555566777787
Q ss_pred Hhhhhc----CCCcchHHHHHHHHHHHHhCCCC------CCCcEEEEEEeCCCCC---CccCHHHHHHH----------H
Q 014393 159 LMGKLG----CSGDSSLQNALDLVQGLLSQIPS------YGHREVLILYSALSTC---DPGDIMETIQK----------C 215 (425)
Q Consensus 159 L~~~l~----~~G~tsL~~AL~~A~~~L~~~p~------~~sreILVI~~s~~t~---dp~~i~~ti~~----------a 215 (425)
|..+.. ..|+|+++.||..|...|..... ...+++|||++++... ||..+.+.++. +
T Consensus 86 i~~l~~~~~~~~g~T~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 165 (223)
T 1q0p_A 86 LNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNP 165 (223)
T ss_dssp HHTCCTTSCSCTTCCCHHHHHHHHHHHHCCTTSSCCTTGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSCBTTBC
T ss_pred HHhcccccccCCCCccHHHHHHHHHHHhhccccccccccccCCeEEEEECCCCCCCCCChHHHHHHHHHHHhhhhhhhhc
Confidence 876531 46899999999999999986422 1345667766655443 44443444432 3
Q ss_pred HhCCcEEEEEEecc--hHHHHHHHHHhhCC--eEEEecCHhHHHHHHHhcCC
Q 014393 216 KESKIRCSVIGLSA--EMFICKHLCQDTGG--SYSVALDESHFKELIMEHAP 263 (425)
Q Consensus 216 kk~~I~V~vIglg~--e~~iLk~iA~~TGG--~Y~~~~d~~~L~~lL~~~~~ 263 (425)
++.+|+|++||+|. +...|++||..||| .|+.+.|.+.|.+++.++..
T Consensus 166 ~~~~i~i~~igvG~~~~~~~L~~iA~~~~G~~~~~~~~~~~~L~~~~~~i~~ 217 (223)
T 1q0p_A 166 REDYLDVYVFGVGPLVNQVNINALASKKDNEQHVFKVKDMENLEDVFYQMID 217 (223)
T ss_dssp CGGGEEEEEEECSSCCCHHHHHHHSCCCTTCCCEEETTC-------------
T ss_pred ccCCcEEEEEEecCcCCHHHHHHHhcCCCCCceEEEcCCHHHHHHHHHHHhc
Confidence 56789999999996 46899999999999 89999999999999887764
No 7
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=99.78 E-value=2.3e-18 Score=161.06 Aligned_cols=171 Identities=16% Similarity=0.167 Sum_probs=131.0
Q ss_pred hccccceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCC--CHHHHHHHH
Q 014393 82 QKGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKAL 159 (425)
Q Consensus 82 r~GiiR~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~--d~~~~i~~L 159 (425)
+.++ +|+|+||.|+||.. ++.+++.+..|++.+....+..++|||.| ++.+..+.|++. +..+++++|
T Consensus 20 ~~~~--div~vlD~SgSM~~-------~~~~k~~~~~~~~~l~~~~~~~rv~lv~F-~~~~~~~~~l~~~~~~~~~~~~i 89 (223)
T 2b2x_A 20 STQL--DIVIVLDGSNSIYP-------WESVIAFLNDLLKRMDIGPKQTQVGIVQY-GENVTHEFNLNKYSSTEEVLVAA 89 (223)
T ss_dssp --CE--EEEEEEECSTTCCC-------HHHHHHHHHHHHTTSCCSTTSCCEEEEEE-SSSEEEEECTTTCCSHHHHHHHH
T ss_pred CCcc--eEEEEEECCCChhh-------HHHHHHHHHHHHHhcccCCCCeEEEEEEe-CCCccEEEecCCCCCHHHHHHHH
Confidence 3444 99999999999972 78888888888876654567899999999 589999999963 456666777
Q ss_pred hhhhcCCC-cchHHHHHHHHHHHHhC-C--CCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecch-----
Q 014393 160 MGKLGCSG-DSSLQNALDLVQGLLSQ-I--PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE----- 230 (425)
Q Consensus 160 ~~~l~~~G-~tsL~~AL~~A~~~L~~-~--p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e----- 230 (425)
..+....| +|+++.||..|.+.+.. . .....+++|||++++...+..++.++++.+++.||+|++||+|.+
T Consensus 90 ~~l~~~gG~~T~~~~aL~~a~~~l~~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~ 169 (223)
T 2b2x_A 90 NKIVQRGGRQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGHYNRGN 169 (223)
T ss_dssp TTCCCCCCSSCCHHHHHHHHHHTTSSGGGTCCTTSEEEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEECGGGC---
T ss_pred HhhhccCCCCccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEecCcccccc
Confidence 65322334 49999999999997432 1 123455677777665555555678899999999999999999975
Q ss_pred ------HHHHHHHHHh-hCCeEEEecCHhHHHHHHHhcC
Q 014393 231 ------MFICKHLCQD-TGGSYSVALDESHFKELIMEHA 262 (425)
Q Consensus 231 ------~~iLk~iA~~-TGG~Y~~~~d~~~L~~lL~~~~ 262 (425)
...|++||.. |||.||.+.|.++|.+++..+.
T Consensus 170 ~~~~~~~~~L~~iA~~p~~g~~~~~~~~~~L~~i~~~i~ 208 (223)
T 2b2x_A 170 LSTEKFVEEIKSIASEPTEKHFFNVSDELALVTIVKALG 208 (223)
T ss_dssp CCCHHHHHHHHTTSCSSGGGTEEEESSTTGGGGGHHHHH
T ss_pred ccchhHHHHHHHHhCCCchhcEEEeCCHHHHHHHHHHHH
Confidence 3799999999 9999999988888877766554
No 8
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=99.78 E-value=4.1e-18 Score=156.63 Aligned_cols=166 Identities=17% Similarity=0.136 Sum_probs=128.1
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCC--CHHHHHHHHhhhhcC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLGC 165 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~--d~~~~i~~L~~~l~~ 165 (425)
++|++||.|.||. .++.+++.+..|++.+....+..|+|||.| ++.+..+.||+. +...++++|..+...
T Consensus 8 div~vlD~SgSm~-------~~~~~k~~~~~~~~~l~~~~~~~rvglv~f-~~~~~~~~~l~~~~~~~~~~~~i~~l~~~ 79 (200)
T 1v7p_C 8 DVVVVCDESNSIY-------PWDAVKNFLEKFVQGLDIGPTKTQVGLIQY-ANNPRVVFNLNTYKTKEEMIVATSQTSQY 79 (200)
T ss_dssp EEEEEEECCTTCC-------CHHHHHHHHHHHHHTSCBSTTSEEEEEEEE-SSSEEEEECTTTCSSHHHHHHHHHHCCCC
T ss_pred cEEEEEECCCCcc-------cHHHHHHHHHHHHHhcCCCCCceEEEEEEE-CCCceEEEeCCCcCCHHHHHHHHHhhhcc
Confidence 9999999999996 278888888888887654456799999999 589999999983 566677777754222
Q ss_pred CC-cchHHHHHHHHHHH-HhCC--CCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecch-----------
Q 014393 166 SG-DSSLQNALDLVQGL-LSQI--PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE----------- 230 (425)
Q Consensus 166 ~G-~tsL~~AL~~A~~~-L~~~--p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e----------- 230 (425)
.| +|+++.||..|.+. +... .....+++|||++++...++.++.++++.+++.||+|++||+|+.
T Consensus 80 ~G~~T~~~~al~~a~~~~~~~~~g~r~~~~~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igvg~~~~~~~~~~~~~ 159 (200)
T 1v7p_C 80 GGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLGYLNRNALDTKNL 159 (200)
T ss_dssp CCSCCCHHHHHHHHHHHTTSGGGTCCTTSEEEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHH
T ss_pred CCCCCcHHHHHHHHHHhhcccccCCCCCCCeEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEecccccccccchhhH
Confidence 34 59999999999996 4321 112345677776665555666677889999999999999999531
Q ss_pred HHHHHHHHHhhCCeE-EEecCHhHHHHHHHhc
Q 014393 231 MFICKHLCQDTGGSY-SVALDESHFKELIMEH 261 (425)
Q Consensus 231 ~~iLk~iA~~TGG~Y-~~~~d~~~L~~lL~~~ 261 (425)
...|++||..|||.| |.+.|.+.|.+++..+
T Consensus 160 ~~~L~~iA~~~~g~~~~~~~~~~~l~~i~~~i 191 (200)
T 1v7p_C 160 IKEIKAIASIPTERYFFNVSDEAALLEKAGTL 191 (200)
T ss_dssp HHHHHHHSCSSHHHHEEEESSSGGGHHHHHHH
T ss_pred HHHHHHHhCCccHhcEEEcCCHHHHHHHHHHH
Confidence 466999999999987 5688888888887655
No 9
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=99.77 E-value=1.9e-17 Score=152.94 Aligned_cols=169 Identities=12% Similarity=0.094 Sum_probs=130.7
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCC--CCHHHHHHHHhhhhcC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--GSPESHIKALMGKLGC 165 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT--~d~~~~i~~L~~~l~~ 165 (425)
+|+++||.|+||.. +++..+++.+..|++.+.-..+..|+|||.| ++.+....||+ .+...+.++|.++...
T Consensus 15 divfvlD~SgSm~~-----~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~f-s~~~~~~~~l~~~~~~~~~~~~i~~l~~~ 88 (202)
T 1ijb_A 15 DLVFLLDGSSRLSE-----AEFEVLKAFVVDMMERLRVSQKWVRVAVVEY-HDGSHAYIGLKDRKRPSELRRIASQVKYA 88 (202)
T ss_dssp EEEEEEECBTTSCH-----HHHHHHHHHHHHHHHTBCBSTTSEEEEEEEE-SSSEEEEECTTCCCCHHHHHHHHHTCCCC
T ss_pred cEEEEEECCCCCCH-----HHHHHHHHHHHHHHHhcccCCCceEEEEEEE-CCCceEEEecCCCCCHHHHHHHHHhCcCC
Confidence 99999999999964 5789999999999987653344679999999 58899999998 6777777777654323
Q ss_pred CC-cchHHHHHHHHHHHH-hCCCCCCCcEEEEEEeCCCCCC--ccCHHHHHHHHHhCCcEEEEEEecc--hHHHHHHHHH
Q 014393 166 SG-DSSLQNALDLVQGLL-SQIPSYGHREVLILYSALSTCD--PGDIMETIQKCKESKIRCSVIGLSA--EMFICKHLCQ 239 (425)
Q Consensus 166 ~G-~tsL~~AL~~A~~~L-~~~p~~~sreILVI~~s~~t~d--p~~i~~ti~~akk~~I~V~vIglg~--e~~iLk~iA~ 239 (425)
.| +|+++.||..|+..+ ........+++|||++++...+ +.++.++++.+++.||+|++||+|. +...|++||.
T Consensus 89 gg~~T~~~~aL~~a~~~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~~~~~~L~~iA~ 168 (202)
T 1ijb_A 89 GSQVASTSEVLKYTLFQIFSKIDRPEASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLIEK 168 (202)
T ss_dssp CBSCCCHHHHHHHHHHHTSSSCSCTTSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTSCHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHHHhccCCCCCCCeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCcCCHHHHHHHhC
Confidence 34 499999999998654 3221123456777766554432 2467889999999999999999996 5689999998
Q ss_pred h-hCCeEEEecCHhHHHHHHHhcC
Q 014393 240 D-TGGSYSVALDESHFKELIMEHA 262 (425)
Q Consensus 240 ~-TGG~Y~~~~d~~~L~~lL~~~~ 262 (425)
. ++|.+|.+.|.+.|.+++..+.
T Consensus 169 ~~~~~~~~~~~~~~~L~~~~~~i~ 192 (202)
T 1ijb_A 169 QAPENKAFVLSSVDELEQQRDEIV 192 (202)
T ss_dssp HCTTCCCEEESSGGGHHHHHHHHH
T ss_pred CCCcccEEEeCCHHHHHHHHHHHH
Confidence 6 5788888889999888877653
No 10
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=99.75 E-value=8.2e-19 Score=159.92 Aligned_cols=166 Identities=15% Similarity=0.119 Sum_probs=123.9
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCH--HHHHHHHhhhhcC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSP--ESHIKALMGKLGC 165 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~--~~~i~~L~~~l~~ 165 (425)
+++++||.|.||...+ +..+++.+..|+..+. ++..++|||.| ++.+....|++... ..+.+.|..+..+
T Consensus 11 div~vlD~SgSM~~~~-----~~~~~~~~~~~~~~l~--~~~~~v~lv~f-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 82 (198)
T 1n3y_A 11 DIVFLIDGSGSISSRN-----FATMMNFVRAVISQFQ--RPSTQFSLMQF-SNKFQTHFTFEEFRRSSNPLSLLASVHQL 82 (198)
T ss_dssp EEEEEEECCTTSCHHH-----HHHHHHHHHHHHTTSC--TTTEEEEEEEE-SSSEEEEECHHHHHHCSSGGGGGTTCCCC
T ss_pred eEEEEEECCCCCCHHH-----HHHHHHHHHHHHHhcC--CCCcEEEEEEe-CCCccEEEecCccCCHHHHHHHHhcCcCC
Confidence 9999999999998653 5567777777877764 67899999999 58899999985311 1233334332236
Q ss_pred CCcchHHHHHHHHHHHH-hCC--CCCCCcEEEEEEeCCC-CCCccCHHHHHHHHHhCCcEEEEEEecchH------HHHH
Q 014393 166 SGDSSLQNALDLVQGLL-SQI--PSYGHREVLILYSALS-TCDPGDIMETIQKCKESKIRCSVIGLSAEM------FICK 235 (425)
Q Consensus 166 ~G~tsL~~AL~~A~~~L-~~~--p~~~sreILVI~~s~~-t~dp~~i~~ti~~akk~~I~V~vIglg~e~------~iLk 235 (425)
.|+|+++.||..|+..+ ... .....+++|||++++. +.++.+..++++.+++.||+|++||+|.+. ..|+
T Consensus 83 ~g~T~~~~al~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~ 162 (198)
T 1n3y_A 83 QGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELN 162 (198)
T ss_dssp CSCBCHHHHHHHHHTTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHH
T ss_pred CCCchHHHHHHHHHHHHhCcccCCCCCCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccccccccHHHHH
Confidence 78999999999999554 321 0123445666665444 346667788999999999999999999864 8999
Q ss_pred HHHHhhCCeE-EEecCHhHHHHHHHhc
Q 014393 236 HLCQDTGGSY-SVALDESHFKELIMEH 261 (425)
Q Consensus 236 ~iA~~TGG~Y-~~~~d~~~L~~lL~~~ 261 (425)
+||..|||.| +.+.+.++|..++..+
T Consensus 163 ~iA~~~~g~~~~~~~~~~~l~~~~~~i 189 (198)
T 1n3y_A 163 DIASKPSQEHIFKVEDFDALKDIQNQL 189 (198)
T ss_dssp HHSCSSSGGGEEEESSGGGGGGGHHHH
T ss_pred HHHcCCCcccEEEeCCHHHHHHHHHHH
Confidence 9999999998 7788888877766554
No 11
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=99.75 E-value=1.2e-17 Score=154.99 Aligned_cols=165 Identities=16% Similarity=0.168 Sum_probs=125.9
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCC--CHHHHHHHHhhhhcC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLGC 165 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~--d~~~~i~~L~~~l~~ 165 (425)
+++++||.|+||.. +..+++.+..|++.+-...+..++|||.| ++.+..+.|++. +...++++|..+...
T Consensus 9 div~vlD~SgSm~~-------~~~~k~~~~~~~~~l~~~~~~~~v~lv~F-~~~~~~~~~l~~~~~~~~~~~~i~~l~~~ 80 (213)
T 1pt6_A 9 DIVIVLDGSNSIYP-------WDSVTAFLNDLLKRMDIGPKQTQVGIVQY-GENVTHEFNLNKYSSTEEVLVAAKKIVQR 80 (213)
T ss_dssp EEEEEEECCTTCCC-------HHHHHHHHHHHHTTSCBSTTSBEEEEEEE-SSSEEEEECTTTCSSHHHHHHHHHTCCCC
T ss_pred cEEEEEECCCChhh-------HHHHHHHHHHHHHhcCCCCCCeEEEEEEe-CCCccEEEeccccCCHHHHHHHHHhccCC
Confidence 99999999999972 67888888888876543467899999999 589999999963 456666777653223
Q ss_pred CC-cchHHHHHHHHHHHHhC-C--CCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecch-----------
Q 014393 166 SG-DSSLQNALDLVQGLLSQ-I--PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE----------- 230 (425)
Q Consensus 166 ~G-~tsL~~AL~~A~~~L~~-~--p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e----------- 230 (425)
.| +|.++.||..|.+.+.. . .....+++|||++++...+..++.++++.+++.||+|++||+|.+
T Consensus 81 ~G~~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig~~~~~~~~~~~~~ 160 (213)
T 1pt6_A 81 GGRQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKF 160 (213)
T ss_dssp CCSSCCHHHHHHHHHHTTTSGGGTCCTTCEEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHH
T ss_pred CCCcccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEeccccccccccchhh
Confidence 44 48999999999997432 1 113345677776655544444567889999999999999999975
Q ss_pred HHHHHHHHHh-hCCeEEEecCHhHHHHHHHh
Q 014393 231 MFICKHLCQD-TGGSYSVALDESHFKELIME 260 (425)
Q Consensus 231 ~~iLk~iA~~-TGG~Y~~~~d~~~L~~lL~~ 260 (425)
...|++||.. |||.||.+.+.+.|.+++..
T Consensus 161 ~~~L~~iA~~~~~g~~~~~~~~~~l~~i~~~ 191 (213)
T 1pt6_A 161 VEEIKSIASEPTEKHFFNVSDELALVTIVKT 191 (213)
T ss_dssp HHHHHHHSCSSHHHHEEEESSGGGGGGGHHH
T ss_pred HHHHHHHhCCCchhcEEEeCCHHHHHHHHHH
Confidence 3789999999 89999999888877766655
No 12
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.75 E-value=2.1e-17 Score=171.34 Aligned_cols=170 Identities=16% Similarity=0.166 Sum_probs=137.4
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEee----CCCCCHHHHHHHHhhhh
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT----DLGGSPESHIKALMGKL 163 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~ls----pLT~d~~~~i~~L~~~l 163 (425)
+||||||.|.||.. +|++.+++.+..|++.+...++..++|||+| ++.++.+. |++.|.+.+.++|.++.
T Consensus 3 div~vlD~SgSM~~-----~~~~~~k~~~~~~~~~l~~~~~~~~v~lv~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 76 (497)
T 1rrk_A 3 NIYLVLDGSDSIGA-----SNFTGAKKVLVNLIEKVASYGVKPRYGLVTY-ATYPKIWVKVSEADSSNADWVTKQLNEIN 76 (497)
T ss_dssp EEEEEEECSTTTCH-----HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE-SSSEEEEECTTSGGGGCHHHHHHHHHHCC
T ss_pred eEEEEEECCCCcch-----hhHHHHHHHHHHHHHHhhccCCCceEEEEEe-cCCceEeeccccccccCHHHHHHHHHhCc
Confidence 89999999999976 7999999999999999887777899999999 58999999 66777888888887653
Q ss_pred ----cCCCcchHHHHHHHHHHHHhCCCC------CCCcEEEEEEeCCCCCCccCHHHHHHHHHhC-------------Cc
Q 014393 164 ----GCSGDSSLQNALDLVQGLLSQIPS------YGHREVLILYSALSTCDPGDIMETIQKCKES-------------KI 220 (425)
Q Consensus 164 ----~~~G~tsL~~AL~~A~~~L~~~p~------~~sreILVI~~s~~t~dp~~i~~ti~~akk~-------------~I 220 (425)
...|+|+++.||..|.+.|..... ...+++|||++++...+..+...+++.+++. +|
T Consensus 77 ~~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 156 (497)
T 1rrk_A 77 YEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYL 156 (497)
T ss_dssp GGGSCCTTCCCHHHHHHHHHHHHCCC------CGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCC-CCCGGGE
T ss_pred CccccccCccCHHHHHHHHHHHhhhhhccccccccccceEEEEEeCCCcccCCChhHHHHHHHHHhhhhcccccchhcCe
Confidence 156899999999999999954321 2244577766655443333556666776666 99
Q ss_pred EEEEEEecc--hHHHHHHHHHhhCC--eEEEecCHhHHHHHHHhcCC
Q 014393 221 RCSVIGLSA--EMFICKHLCQDTGG--SYSVALDESHFKELIMEHAP 263 (425)
Q Consensus 221 ~V~vIglg~--e~~iLk~iA~~TGG--~Y~~~~d~~~L~~lL~~~~~ 263 (425)
+|++||+|. +...|++||..+|| .|+.+.|.+.|.+++...+.
T Consensus 157 ~v~~igvG~~~~~~~L~~iA~~~~g~~~~~~~~~~~~l~~~~~~~i~ 203 (497)
T 1rrk_A 157 DVYVFGVGPLVNQVNINALASKKDNEQHVCKVKDMECLEDVFYQMID 203 (497)
T ss_dssp EEEEEECSSSCCHHHHHHHSCCCTTCCCEEETTCHHHHHHHHHHHSC
T ss_pred eEEEecCCCccCHHHHHHHhcCCCCcceEEEeCCHHHHhhhhhhccc
Confidence 999999996 46899999999999 99999999999999987653
No 13
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=99.74 E-value=2.1e-17 Score=160.24 Aligned_cols=173 Identities=13% Similarity=0.138 Sum_probs=135.7
Q ss_pred hccccceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCC----HHHHHH
Q 014393 82 QKGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGS----PESHIK 157 (425)
Q Consensus 82 r~GiiR~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d----~~~~i~ 157 (425)
+..+ +||||||.|+||... +++..+++.+..|++.+.......++|||.|. +.+..+.||+.. .+.+++
T Consensus 19 ~~~~--div~vlD~SgSM~~~----~~~~~~k~~~~~~v~~l~~~~~~~rvglv~Fs-~~~~~~~~l~~~~~~~~~~l~~ 91 (281)
T 4hqf_A 19 NDEV--DLYLLMDGSGSIRRH----NWVNHAVPLAMKLIQQLNLNDNAIHLYASVFS-NNAREIIRLHSDASKNKEKALI 91 (281)
T ss_dssp CSCE--EEEEEEECCCCSSTH----HHHHHHHHHHHHHHTTCCCCTTSEEEEEEEEE-TTEEEEEEECSSCSSCHHHHHH
T ss_pred CCce--eEEEEEeCCCCcCHH----HHHHHHHHHHHHHHHHhccCCCCcEEEEEEcC-CCceEEEEccccCccCHHHHHH
Confidence 3455 999999999999753 34588899999999877655557899999995 889999998864 566666
Q ss_pred HHhhhh---cCCCcchHHHHHHHHHHHHhCCCC-CCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecc--hH
Q 014393 158 ALMGKL---GCSGDSSLQNALDLVQGLLSQIPS-YGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA--EM 231 (425)
Q Consensus 158 ~L~~~l---~~~G~tsL~~AL~~A~~~L~~~p~-~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~--e~ 231 (425)
+|..+. .+.|+|.++.||..|+..|..... ...+++|||++++...|+.++.++++.+++.||+|++||||. +.
T Consensus 92 ~i~~l~~~~~~~G~T~~~~aL~~a~~~l~~~~~r~~~~~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~~~~ 171 (281)
T 4hqf_A 92 IIKSLLSTNLPYGKTSLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGINV 171 (281)
T ss_dssp HHHHHHHTTGGGCSCCHHHHHHHHHHHHHTSCCCTTCEEEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSSCCH
T ss_pred HHHHHhhccCCCCCccHHHHHHHHHHHHHhccCCCCCCEEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCccCH
Confidence 666543 367899999999999999876421 234567777776655566678889999999999999999997 46
Q ss_pred HHHHHHHHh--hCC--eEEEecCHhHHHHHHHhc
Q 014393 232 FICKHLCQD--TGG--SYSVALDESHFKELIMEH 261 (425)
Q Consensus 232 ~iLk~iA~~--TGG--~Y~~~~d~~~L~~lL~~~ 261 (425)
..|++||.. +|| .|+.+.+.+.|..++..+
T Consensus 172 ~~L~~iA~~~~~~g~~~~~~~~~~~~L~~~~~~l 205 (281)
T 4hqf_A 172 AFNRFLVGCHPSDGKCNLYADSAWENVKNVIGPF 205 (281)
T ss_dssp HHHHHHTTSCSSSSCCTTEEEECGGGHHHHHHHH
T ss_pred HHHHhhhCCCCCCCCCceEEecchhhhhcccCCc
Confidence 899999987 566 788888888887776544
No 14
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=99.73 E-value=1e-16 Score=145.80 Aligned_cols=162 Identities=14% Similarity=0.147 Sum_probs=128.0
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCC--CCCHHHHHHHHhhhhcC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDL--GGSPESHIKALMGKLGC 165 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspL--T~d~~~~i~~L~~~l~~ 165 (425)
+++++||.|+||.. +|++.+++.+..|++.+.......++|||.| ++.+....|+ +.+.+.+.++|..+...
T Consensus 7 div~vlD~SgSm~~-----~~~~~~k~~~~~~~~~l~~~~~~~rv~lv~f-~~~~~~~~~l~~~~~~~~~~~~i~~l~~~ 80 (189)
T 1atz_A 7 DVILLLDGSSSFPA-----SYFDEMKSFAKAFISKANIGPRLTQVSVLQY-GSITTIDVPWNVVPEKAHLLSLVDVMQRE 80 (189)
T ss_dssp EEEEEEECSSSSCH-----HHHHHHHHHHHHHHHHSCBSTTSEEEEEEEE-SSSEEEEECTTCCCCHHHHHHHHHTCCCC
T ss_pred eEEEEEeCCCCCCh-----hhHHHHHHHHHHHHHhcCcCCCCeEEEEEEE-CCcceEEEecCCCCCHHHHHHHHHhCcCC
Confidence 99999999999964 7999999999999988643334579999999 5899999999 77888888888764334
Q ss_pred CCcchHHHHHHHHHHHHhCCC---CCCCcE-EEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecc--hHHHHHHHHH
Q 014393 166 SGDSSLQNALDLVQGLLSQIP---SYGHRE-VLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA--EMFICKHLCQ 239 (425)
Q Consensus 166 ~G~tsL~~AL~~A~~~L~~~p---~~~sre-ILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~--e~~iLk~iA~ 239 (425)
.|+|+++.||..|.+.+.... ..+.++ +|||+++..+ .++.++++.+++.||+|++||+|. +...|+.||.
T Consensus 81 ~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~vivltdg~~~---~~~~~~~~~~~~~gi~v~~igvG~~~~~~~L~~iA~ 157 (189)
T 1atz_A 81 GGPSQIGDALGFAVRYLTSEMHGARPGASKAVVILVTDVSV---DSVDAAADAARSNRVTVFPIGIGDRYDAAQLRILAG 157 (189)
T ss_dssp CCCCCHHHHHHHHHHHHHSCCTTCCTTSEEEEEEEECSCCS---SCCHHHHHHHHHTTEEEEEEEESSSSCHHHHHHHTG
T ss_pred CCcchHHHHHHHHHHHHhccccCCCCCCCcEEEEEeCCCCC---chHHHHHHHHHHCCCEEEEEEcCCcCCHHHHHHHHC
Confidence 688999999999999987531 122345 4555555443 245788999999999999999996 4689999999
Q ss_pred hhCCeE-EEecCHhHHHHHH
Q 014393 240 DTGGSY-SVALDESHFKELI 258 (425)
Q Consensus 240 ~TGG~Y-~~~~d~~~L~~lL 258 (425)
.++|.| +.+.+.++|..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~ 177 (189)
T 1atz_A 158 PAGDSNVVKLQRIEDLPTMV 177 (189)
T ss_dssp GGGGGGCEEESSTTHHHHHH
T ss_pred CCcccCEEEecChhhHHHHH
Confidence 998765 4566777777774
No 15
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=99.73 E-value=5.5e-17 Score=156.58 Aligned_cols=174 Identities=16% Similarity=0.144 Sum_probs=138.4
Q ss_pred hccccceEEEEEeCCHhhhcCCCCCCHH-HHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCC----HHHHH
Q 014393 82 QKGLIRYLYIVIDLSRAAAEMDFRPSRM-AVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGS----PESHI 156 (425)
Q Consensus 82 r~GiiR~lvlvLD~S~SM~a~D~~P~RL-~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d----~~~~i 156 (425)
++.+ +|+|+||.|+||... .+ ..+++.+..|++.+...++..++|||.| ++.+..+.||+.. ...++
T Consensus 16 ~~~~--DivfvlD~SgSM~~~-----~~~~~~k~~~~~lv~~l~~~~~~~rvglv~F-s~~~~~~~~l~~~~~~~~~~~~ 87 (266)
T 4hqo_A 16 NEQV--DLYLLVDGSGSIGYP-----NWITKVIPMLNGLINSLSLSRDTINLYMNLF-GSYTTELIRLGSGQSIDKRQAL 87 (266)
T ss_dssp CCCE--EEEEEEECSTTTCHH-----HHHHTHHHHHHHHHHTCCBCTTSEEEEEEEE-SSSEEEEECTTSHHHHCHHHHH
T ss_pred CCce--eEEEEEECCCCcChh-----HHHHHHHHHHHHHHHHcccCCCCcEEEEEEe-cCCcceEEecCCCCccCHHHHH
Confidence 3455 999999999999754 45 4788888999988765567899999999 5889999999865 45666
Q ss_pred HHHhhhh---cCCCcchHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecc--h
Q 014393 157 KALMGKL---GCSGDSSLQNALDLVQGLLSQI-PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA--E 230 (425)
Q Consensus 157 ~~L~~~l---~~~G~tsL~~AL~~A~~~L~~~-p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~--e 230 (425)
.+|.++. .+.|+|.++.||..|..+|... .....+++|||++++...|+.++.++++.+++.||+|++||||. +
T Consensus 88 ~~i~~l~~~~~~~G~T~~~~AL~~a~~~l~~~~~r~~~~~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~~ 167 (266)
T 4hqo_A 88 SKVTELRKTYTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGIN 167 (266)
T ss_dssp HHHHHHHHHCCCCSCCCHHHHHHHHHHHHHTTCSCTTSEEEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSCC
T ss_pred HHHHHhhhccCCCCCCCHHHHHHHHHHHHhhccccCCCCeEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCcccC
Confidence 7776653 5788999999999999999764 11334567777766555566678899999999999999999997 4
Q ss_pred HHHHHHHHHhh--CC--eEEEecCHhHHHHHHHhcCC
Q 014393 231 MFICKHLCQDT--GG--SYSVALDESHFKELIMEHAP 263 (425)
Q Consensus 231 ~~iLk~iA~~T--GG--~Y~~~~d~~~L~~lL~~~~~ 263 (425)
..+|++||... +| .|+.+.|.+.|.+++..+..
T Consensus 168 ~~~L~~iA~~~~~~g~~~~~~~~d~~~L~~i~~~l~~ 204 (266)
T 4hqo_A 168 HQFNRLIAGCRPREPNCKFYSYADWNEAVALIKPFIA 204 (266)
T ss_dssp HHHHHHHHTCCTTCSSCTTEECSCHHHHHHHHHHHHC
T ss_pred HHHHHHhhCCCCCCCCCCeEEecCHHHHHHHHHHHHh
Confidence 68899999875 33 78888999999998877764
No 16
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=99.73 E-value=4.6e-18 Score=155.12 Aligned_cols=166 Identities=10% Similarity=0.041 Sum_probs=127.6
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCC--HHHHHHHHhhhhcC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGS--PESHIKALMGKLGC 165 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d--~~~~i~~L~~~l~~ 165 (425)
+++++||.|+||.. +++..+++.+..|++.+. .+..++|||.| ++.+..+.|++.. ...+.++|.++..+
T Consensus 7 div~vlD~SgSm~~-----~~~~~~k~~~~~~~~~l~--~~~~~v~vv~f-~~~~~~~~~l~~~~~~~~~~~~i~~l~~~ 78 (194)
T 1mf7_A 7 DIAFLIDGSGSIIP-----HDFRRMKEFVSTVMEQLK--KSKTLFSLMQY-SEEFRIHFTFKEFQNNPNPRSLVKPITQL 78 (194)
T ss_dssp EEEEEEECCTTSCH-----HHHHHHHHHHHHHHHHHC--CTTEEEEEEEE-SSSEEEEECHHHHHHSCCHHHHHTTCCCC
T ss_pred eEEEEEeCCCCCCH-----HHHHHHHHHHHHHHHhcC--CCCeEEEEEEe-cCCceEEEecCCcCCHHHHHHHHHhCcCC
Confidence 99999999999964 478899999999998875 45689999999 5889999998752 23455556553235
Q ss_pred CCcchHHHHHHHHHHHHhCC-C--CCCCcEEEEEEeCCCCC-CccCHHHHHHHHHhCCcEEEEEEecchH------HHHH
Q 014393 166 SGDSSLQNALDLVQGLLSQI-P--SYGHREVLILYSALSTC-DPGDIMETIQKCKESKIRCSVIGLSAEM------FICK 235 (425)
Q Consensus 166 ~G~tsL~~AL~~A~~~L~~~-p--~~~sreILVI~~s~~t~-dp~~i~~ti~~akk~~I~V~vIglg~e~------~iLk 235 (425)
.|+|+++.||..|.+.+... . ....+++|||++++... |+.++.++++.+++.||+|++||+|.+. ..|+
T Consensus 79 ~g~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~L~ 158 (194)
T 1mf7_A 79 LGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELN 158 (194)
T ss_dssp CSCBCHHHHHHHHHHTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccccccccHHHHH
Confidence 78999999999999765321 1 12234566666554443 6666678899999999999999999764 8999
Q ss_pred HHHHhh-CCeEEEecCHhHHHHHHHhc
Q 014393 236 HLCQDT-GGSYSVALDESHFKELIMEH 261 (425)
Q Consensus 236 ~iA~~T-GG~Y~~~~d~~~L~~lL~~~ 261 (425)
+||..+ +|.||.+.|.+.|.+++..+
T Consensus 159 ~iA~~~~~~~~~~~~~~~~l~~~~~~i 185 (194)
T 1mf7_A 159 TIASKPPRDHVFQVNNFEALKTIQNQL 185 (194)
T ss_dssp HHSCSSHHHHEEEESSGGGGGGGHHHH
T ss_pred HHhCCCCcccEEEeCCHHHHHHHHHHH
Confidence 999986 58888888888877776554
No 17
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.73 E-value=1.7e-17 Score=149.27 Aligned_cols=165 Identities=12% Similarity=0.124 Sum_probs=124.4
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCHHHHHHHHhhhh--cC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL--GC 165 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~~~~i~~L~~~l--~~ 165 (425)
+++++||.|+||... +...++.++.++..++ +|..++|||.| ++.+..+.|++.+.+.+..+|..+. .+
T Consensus 9 div~vlD~SgSM~~~------~~~~~~~~~~~~~~~~--~~~~~v~lv~f-~~~~~~~~~l~~~~~~~~~~i~~l~~~~~ 79 (185)
T 3n2n_F 9 DLYFILDKSGSVLHH------WNEIYYFVEQLAHKFI--SPQLRMSFIVF-STRGTTLMKLTEDREQIRQGLEELQKVLP 79 (185)
T ss_dssp EEEEEEECSGGGGGG------HHHHHHHHHHHHHHCC--CTTEEEEEEEE-SSSEEEEEEEECCHHHHHHHHHHHHTCCC
T ss_pred eEEEEEeCCCChhhh------HHHHHHHHHHHHHHhC--CCCcEEEEEEE-ecCceEEeccCCCHHHHHHHHHHHhhhcC
Confidence 999999999999752 4555666666776663 47899999999 5999999999999888888877654 46
Q ss_pred CCcchHHHHHHHHHHHHhC--CCCCCCcEEEEEEeCCCCCCcc--CHHHHHHHHHhCCcEEEEEEecc-hHHHHHHHHHh
Q 014393 166 SGDSSLQNALDLVQGLLSQ--IPSYGHREVLILYSALSTCDPG--DIMETIQKCKESKIRCSVIGLSA-EMFICKHLCQD 240 (425)
Q Consensus 166 ~G~tsL~~AL~~A~~~L~~--~p~~~sreILVI~~s~~t~dp~--~i~~ti~~akk~~I~V~vIglg~-e~~iLk~iA~~ 240 (425)
.|+|.++.||..|.+.|.. .++...+++||+++++...+.. ++.+.++.+++.||+|++||+|. +...|++||..
T Consensus 80 ~g~T~~~~al~~a~~~l~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg~~~~~~L~~iA~~ 159 (185)
T 3n2n_F 80 GGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADS 159 (185)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTTCBCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECSSCCHHHHTTTSSS
T ss_pred CCCccHHHHHHHHHHHHhhccccCCCCCcEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEeccCCHHHHHHHhCC
Confidence 8999999999999998832 2222244566666655432222 23578999999999999999994 46899999976
Q ss_pred hCCeEEEecC-HhHHHHHHHhcC
Q 014393 241 TGGSYSVALD-ESHFKELIMEHA 262 (425)
Q Consensus 241 TGG~Y~~~~d-~~~L~~lL~~~~ 262 (425)
. |.+|.+.| .+.|..++..+.
T Consensus 160 ~-~~~~~~~~~~~~L~~~~~~i~ 181 (185)
T 3n2n_F 160 K-DHVFPVNDGFQALQGIIHSIL 181 (185)
T ss_dssp G-GGEEEHHHHHHHHHHHHHHHH
T ss_pred C-CCeEEeccHHHHHHHHHHHHH
Confidence 5 45555555 788888876653
No 18
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=99.73 E-value=9e-17 Score=167.62 Aligned_cols=164 Identities=15% Similarity=0.180 Sum_probs=126.1
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCC--------CCHHHHHHHH
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--------GSPESHIKAL 159 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT--------~d~~~~i~~L 159 (425)
+++|+||.|+||. ..++||..+++.+..|++.+ .|.+++|||+| ++.+..+.|++ .+...+.+.|
T Consensus 79 dvv~VLD~SGSM~---~~~~rl~~ak~a~~~ll~~L---~~~drv~lV~F-s~~a~~~~p~t~~l~~~~~~~~~~l~~~I 151 (464)
T 4fx5_A 79 VEVIIIDCSGSMD---YPRTKMMAAKEATKVAIDTL---TDGAFFAVVAG-TEGARVVYPTGGQLLRADYQSRAAAKEAV 151 (464)
T ss_dssp EEEEEEECCGGGG---TTTHHHHHHHHHHHHHHHHS---CTTCEEEEEEE-SSSEEEEESSSSSCEECSHHHHHHHHHHH
T ss_pred eEEEEEEcCcccC---CCCchHHHHHHHHHHHHHhC---CCCCEEEEEEE-cCceEEEecCCcccccCCHHHHHHHHHHH
Confidence 9999999999997 34899999999999999875 36789999999 69999999987 2344555555
Q ss_pred hhhhcCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCC--ccCHHHHHHHHHhCCcEEEEEEecch--HHHHH
Q 014393 160 MGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCD--PGDIMETIQKCKESKIRCSVIGLSAE--MFICK 235 (425)
Q Consensus 160 ~~~l~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~d--p~~i~~ti~~akk~~I~V~vIglg~e--~~iLk 235 (425)
.. +.+.|+|++..||..|+..|...+ ...++|||++++...+ +..+.+++ .+.+.+|+|++||+|.+ ...|+
T Consensus 152 ~~-L~~~GgT~l~~aL~~A~~~l~~~~--~~~~~IILLTDG~~~~~~~~~l~~~~-~a~~~~i~i~tiGiG~~~d~~~L~ 227 (464)
T 4fx5_A 152 GR-LHANGGTAMGRWLAQAGRIFDTAP--SAIKHAILLTDGKDESETPADLARAI-QSSIGNFTADCRGIGEDWEPKELR 227 (464)
T ss_dssp HT-CCCCSCCCHHHHHHHHHHHHTTCT--TSEEEEEEEESSCCTTSCHHHHHHHH-HHHTTTCEEEEEEESSSSCHHHHH
T ss_pred Hc-CCCCCCCcHHHHHHHHHHHHhcCC--CCCCEEEEEcCCCCCCCChHHHHHHH-HHhcCCCeEEEEEeCCccCHHHHH
Confidence 44 367899999999999999998753 3334555554433322 21222333 34578999999999964 68999
Q ss_pred HHHHhhCCeEEEecCHhHHHHHHHhcC
Q 014393 236 HLCQDTGGSYSVALDESHFKELIMEHA 262 (425)
Q Consensus 236 ~iA~~TGG~Y~~~~d~~~L~~lL~~~~ 262 (425)
+||+.|||.|+.+.+.+.|.+.+..++
T Consensus 228 ~IA~~tgG~~~~v~d~~~L~~~f~~i~ 254 (464)
T 4fx5_A 228 KIADALLGTVGIIRDPATLAEDFREMT 254 (464)
T ss_dssp HHHHHTTCCEEEESSGGGHHHHHHHHH
T ss_pred HHHHhCCCEEEEcCCHHHHHHHHHHHH
Confidence 999999999999999988777665554
No 19
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=99.70 E-value=1.1e-16 Score=170.58 Aligned_cols=161 Identities=14% Similarity=0.081 Sum_probs=126.6
Q ss_pred eEEEEEeCCHhhhcCCC-CCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCce--------------EEeeCCCCCH
Q 014393 88 YLYIVIDLSRAAAEMDF-RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA--------------NCLTDLGGSP 152 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~-~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A--------------~~lspLT~d~ 152 (425)
.+|++||+|+||.+.|. .|+||+.+++.+..|++.....+|.++||||+|+ +.+ .++.||+...
T Consensus 9 ~iv~~iDvS~SM~~~d~~~~srl~~ak~~i~~~i~~ki~~~~~D~vGlv~f~-~~~~~~plt~d~~y~~i~vl~~l~~~~ 87 (565)
T 1jey_B 9 AVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG-TDGTDNPLSGGDQYQNITVHRHLMLPD 87 (565)
T ss_dssp EEEEEEECCGGGGCCBTTBCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEES-CSSCBSTTCTTTCSTTEEEEEEEECCC
T ss_pred EEEEEEECChHhcccCCCCCCcHHHHHHHHHHHHHHHhcCCCCCEEEEEEEc-cCCCCCccccccCCCceEEeecCCCCC
Confidence 68999999999999998 7999999999999999987778999999999995 554 2445554333
Q ss_pred HHHHHHHhhhhcCC-CcchHHHHHHHHHHHHhCC--CCC-CCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEE-EEEe
Q 014393 153 ESHIKALMGKLGCS-GDSSLQNALDLVQGLLSQI--PSY-GHREVLILYSALSTCDPGDIMETIQKCKESKIRCS-VIGL 227 (425)
Q Consensus 153 ~~~i~~L~~~l~~~-G~tsL~~AL~~A~~~L~~~--p~~-~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~-vIgl 227 (425)
...++.|.+.+.+. ++++|++||.+|..+|++. ... .+|+||+|+++.++.+..++.++++.+++.||+|+ |||+
T Consensus 88 ~~~l~~l~~~l~~~~~~t~i~~al~~A~~~l~~~~~~~k~~~krIiLlTDg~~~~~~~~~~~~a~~l~~~gI~i~~vig~ 167 (565)
T 1jey_B 88 FDLLEDIESKIQPGSQQADFLDALIVSMDVIQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPF 167 (565)
T ss_dssp HHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHSSSSCCSEEEEEEECCCCSCCCCTTHHHHHHHHHHTTEEEEEEESS
T ss_pred HHHHHHHHhhccCCCccccHHHHHHHHHHHHHHHhhcccccccEEEEEeCCCCCCCHHHHHHHHHHHHhcCcEEEEEecc
Confidence 45667777644443 6899999999999999864 222 34566666655444455678899999999999999 9988
Q ss_pred cch----------------------------------HHHHHHHHHhhCC-----eEEEec
Q 014393 228 SAE----------------------------------MFICKHLCQDTGG-----SYSVAL 249 (425)
Q Consensus 228 g~e----------------------------------~~iLk~iA~~TGG-----~Y~~~~ 249 (425)
|.+ ..+|++||+.||| .|+.+.
T Consensus 168 g~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~e~~L~~ia~~~~G~~~~s~~~~~~ 228 (565)
T 1jey_B 168 SLGKEDGSGDRGDGPFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFS 228 (565)
T ss_dssp CCC----------CCCCTTCSSCCCCTTTSCHHHHHHHHHHHHHHHHHHCGGGGGGEEEHH
T ss_pred CCCcCCcccccccccccccccccccchhccccchhhhHHHHHHHHHhcCCCcccceeecHH
Confidence 753 2359999999999 898864
No 20
>2x31_A Magnesium-chelatase 60 kDa subunit; ligase, bacteriochlorophyll biosynthesis, photosynthesis; 7.50A {Rhodobacter capsulatus}
Probab=99.68 E-value=2.9e-19 Score=162.24 Aligned_cols=166 Identities=15% Similarity=0.157 Sum_probs=126.6
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCHHHHHHHHhhhhcCCC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSG 167 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~~~~i~~L~~~l~~~G 167 (425)
+++|+||.|+||. ++|+..+++.+..|++.+ .++.+++|||+|.+..+.++.|++.+...+.+.|..+ .+.|
T Consensus 7 ~vv~vlD~SgSM~-----~~~~~~~k~~~~~~~~~~--~~~~~~v~lv~f~~~~~~~~~~~~~~~~~~~~~i~~l-~~~g 78 (189)
T 2x31_A 7 VLIFAVDASGSAA-----VARLSEAKGAVELLLGRA--YAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGL-PGGG 78 (189)
T ss_dssp EEEEEEECCTTSC-----C--CHHHHHHHHHHHHHS--CTTTSCCCEEEESBSCCCBCTTTCSCHHHHHHHHHHC-CCCB
T ss_pred EEEEEEECCCCCC-----chHHHHHHHHHHHHHHHh--cCCCcEEEEEEECCCCceEecCCCCCHHHHHHHHhcC-CCCC
Confidence 9999999999994 579999999999999765 3677999999996447899999999988887777653 6789
Q ss_pred cchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCcc-----------CHHHHHHHHHhCCcEEEEEEecch-HHHHH
Q 014393 168 DSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG-----------DIMETIQKCKESKIRCSVIGLSAE-MFICK 235 (425)
Q Consensus 168 ~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~-----------~i~~ti~~akk~~I~V~vIglg~e-~~iLk 235 (425)
+|++..||..|+..|........+++|||++++...++. ++.+.++.+++.||+|++||+|.. ...|+
T Consensus 79 ~T~~~~al~~a~~~l~~~~~~~~~~~ivliTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~ig~g~~~~~~L~ 158 (189)
T 2x31_A 79 GTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALV 158 (189)
T ss_dssp CCCCHHHHHHHHHHHHTCTTTCSSEEEEECCBSCCSSCCTHHHHHGGGTCCCEEEEECTGGGGSCCTHHHHHHSSCSSSC
T ss_pred CCCHHHHHHHHHHHHHhccCCCCceEEEEECCCCCCCCCCccccccchhHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH
Confidence 999999999999999875433345566666544332221 222446677889999999999975 67899
Q ss_pred HHHHhhCCeEEEecCH--hHHHHHHHhc
Q 014393 236 HLCQDTGGSYSVALDE--SHFKELIMEH 261 (425)
Q Consensus 236 ~iA~~TGG~Y~~~~d~--~~L~~lL~~~ 261 (425)
+||..|||.|+.+.+. +.|.+++...
T Consensus 159 ~iA~~~~G~~~~~~~~~~~~~~~~~~~~ 186 (189)
T 2x31_A 159 DLARTMDAHYIALPRATAHKMADVLGAA 186 (189)
T ss_dssp STTTEEEESSTTTHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCeEEECCCcchHHHHHHHHHh
Confidence 9999999999976433 3466655543
No 21
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.68 E-value=1.6e-16 Score=165.50 Aligned_cols=169 Identities=14% Similarity=0.163 Sum_probs=134.9
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCC----CHHHHHHHHhhhh
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----SPESHIKALMGKL 163 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~----d~~~~i~~L~~~l 163 (425)
+|||+||.|+||... +++.+++.+..|++.+...++..++|||+| ++.+..+.|++. |.+.++++|.++.
T Consensus 11 divfvlD~SgSM~~~-----~~~~~k~~~~~l~~~l~~~~~~~rv~lv~f-~~~~~~~~~l~~~~~~~~~~~~~~l~~l~ 84 (509)
T 2odp_A 11 NLYLLLDASQSVSEN-----DFLIFKESASLMVDRIFSFEINVSVAIITF-ASEPKVLMSVLNDNSRDMTEVISSLENAN 84 (509)
T ss_dssp EEEEEEECSTTSCHH-----HHHHHHHHHHHHHHHHHTTCCCEEEEEEEE-SSSEEEEECTTSGGGGCHHHHHHHHHTCC
T ss_pred eEEEEEeCCCccchh-----hHHHHHHHHHHHHHHhhccCCCceEEEEEc-cCCCceeEeccCCCCCCHHHHHHHHHhcc
Confidence 999999999999754 678999999999998866678899999999 599999999986 7788888887642
Q ss_pred c---C-CCcchHHHHHHHHHHHHhCCC---C------CCCcEEEEEEeCCCCCCccCHHHHHHHHH---------hCCcE
Q 014393 164 G---C-SGDSSLQNALDLVQGLLSQIP---S------YGHREVLILYSALSTCDPGDIMETIQKCK---------ESKIR 221 (425)
Q Consensus 164 ~---~-~G~tsL~~AL~~A~~~L~~~p---~------~~sreILVI~~s~~t~dp~~i~~ti~~ak---------k~~I~ 221 (425)
. + .|+|+++.||..|++.|.... + ...+++|||++++...+..+..++++.++ +.+|+
T Consensus 85 ~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 164 (509)
T 2odp_A 85 YKDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLD 164 (509)
T ss_dssp GGGGTTCCSCCHHHHHHHHHHHHHHHHHHHCTTSHHHHTEEEEEEEESCSCCCSSSCTHHHHHHHHHHTTCCSTTGGGEE
T ss_pred cccCCCCCCccHHHHHHHHHHHHhhcccccccccccccccceEEEEECCCCccCCCChhHHHHHHHHHhhccccccCceE
Confidence 1 1 489999999999999995421 0 12345666666554433344556666666 88999
Q ss_pred EEEEEecc---hHHHHHHHHHhhCCe--EEEecCHhHHHHHHHhcC
Q 014393 222 CSVIGLSA---EMFICKHLCQDTGGS--YSVALDESHFKELIMEHA 262 (425)
Q Consensus 222 V~vIglg~---e~~iLk~iA~~TGG~--Y~~~~d~~~L~~lL~~~~ 262 (425)
|++||+|. +...|++||..+||. |+.+.|.+.|.+++..+.
T Consensus 165 i~~iGvG~~~~~~~~L~~iA~~~~G~~~~~~~~~~~~l~~~~~~i~ 210 (509)
T 2odp_A 165 IYAIGVGKLDVDWRELNELGSKKDGERHAFILQDTKALHQVFEHML 210 (509)
T ss_dssp EEEEEESSSCCCHHHHHHHSCCCTTCCCEEEESSHHHHHHHHHHHE
T ss_pred EEEEEcCCCcccHHHHHhhccCCCCceeeEEecCHHHHHHHHHhhh
Confidence 99999997 478999999999998 888999999999998774
No 22
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.67 E-value=3.2e-16 Score=170.08 Aligned_cols=172 Identities=16% Similarity=0.166 Sum_probs=132.8
Q ss_pred ccccceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCC----CHHHHHHH
Q 014393 83 KGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----SPESHIKA 158 (425)
Q Consensus 83 ~GiiR~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~----d~~~~i~~ 158 (425)
.++ +||||||.|+||... .+..+++.+..|++.+.......|+|||+| ++.+..+.|++. |.+.++++
T Consensus 242 ~~~--div~vlD~SgSM~~~-----~~~~~k~~~~~~i~~l~~~~~~~rv~lv~f-~~~~~~~~~l~~~~~~~~~~~~~~ 313 (741)
T 3hrz_D 242 GSM--NIYLVLDGSGSIGAS-----DFTGAKKCLVNLIEKVASYGVKPRYGLVTY-ATYPKIWVKVSEADSSNADWVTKQ 313 (741)
T ss_dssp CEE--EEEEEEECSTTTCHH-----HHHHHHHHHHHHHHHHHHTTCCCEEEEEEE-SSSEEEEECTTSGGGGCHHHHHHH
T ss_pred Cce--eEEEEeccCCccccc-----chHHHHHHHHHHHHhhhccCCCceEEEEEe-ccCCceeEeecccCCcCHHHHHHH
Confidence 455 999999999999764 588999999999999876666789999999 599999999997 77778888
Q ss_pred Hhhhhc----CCCcchHHHHHHHHHHHHhCCCC------CCCcEEEEEEeCCCCCCccCHHHHHH-------------HH
Q 014393 159 LMGKLG----CSGDSSLQNALDLVQGLLSQIPS------YGHREVLILYSALSTCDPGDIMETIQ-------------KC 215 (425)
Q Consensus 159 L~~~l~----~~G~tsL~~AL~~A~~~L~~~p~------~~sreILVI~~s~~t~dp~~i~~ti~-------------~a 215 (425)
|.++.. ..|+|.++.||..|++.|..... ...+++|||++++.....++...+++ .+
T Consensus 314 i~~l~~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~n~g~~p~~~~~~i~~~~~~~~~a~~~ 393 (741)
T 3hrz_D 314 LNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNP 393 (741)
T ss_dssp HTTCCGGGGSSSCCCCHHHHHHHHHHHHCCC--CCCTTGGGEEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCTTCC
T ss_pred HHhcccccccCCCChHHHHHHHHHHHHHhhhhhccccchhccCeEEEEECCCccccCCCchHHHHHHHHHhhcccccccc
Confidence 876431 67899999999999999942211 11345666665543322223333333 55
Q ss_pred HhCCcEEEEEEecc--hHHHHHHHHHhhCCe--EEEecCHhHHHHHHHhcC
Q 014393 216 KESKIRCSVIGLSA--EMFICKHLCQDTGGS--YSVALDESHFKELIMEHA 262 (425)
Q Consensus 216 kk~~I~V~vIglg~--e~~iLk~iA~~TGG~--Y~~~~d~~~L~~lL~~~~ 262 (425)
++.+|+|++||+|. +...|++||..++|. ||.+.|.+.|.+++..++
T Consensus 394 ~~~gi~i~~igvG~~~~~~~L~~ia~~~~g~~~~~~~~~~~~L~~~~~~l~ 444 (741)
T 3hrz_D 394 REDYLDVYVFGVGPLVNQVNINALASKKDNEQHVFKVKDMENLEDVFYQMI 444 (741)
T ss_dssp CGGGEEEEEEECSSSCCHHHHHHHSCCCTTCCCEECBSSHHHHHHHHHHHH
T ss_pred cccCeeEEEEeCCCcCCHHHHHHHhcCCCCcceEEEeCCHHHHHHHHHHhh
Confidence 67899999999994 578999999999996 888889998888877643
No 23
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=99.64 E-value=1.9e-15 Score=136.54 Aligned_cols=142 Identities=12% Similarity=0.049 Sum_probs=108.5
Q ss_pred hccccceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCC----CHHHHHH
Q 014393 82 QKGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----SPESHIK 157 (425)
Q Consensus 82 r~GiiR~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~----d~~~~i~ 157 (425)
++.+ +|||+||.|+||.. +++..+++.+..|++.+-...+..++|||.| ++.+....|++. +.+.+.+
T Consensus 15 ~~~~--divfvlD~SgSm~~-----~~~~~~k~~~~~~i~~l~~~~~~~rv~vv~F-~~~~~~~~~l~~~~~~~~~~~~~ 86 (178)
T 2xgg_A 15 TNQL--DICFLIDSSGSIGI-----QNFRLVKQFLHTFLMVLPIGPEEVNNAVVTY-STDVHLQWDLQSPNAVDKQLAAH 86 (178)
T ss_dssp TTCE--EEEEEEECCTTTCH-----HHHHHHHHHHHHHHHHSCBSTTSEEEEEEEE-SSSEEEEECTTSGGGSCHHHHHH
T ss_pred CCCe--eEEEEEECCCCCCH-----HHHHHHHHHHHHHHHhcCCCCCCeEEEEEEe-CCceEEEEeCCCCCccCHHHHHH
Confidence 3444 99999999999953 5889999999999988644345589999999 589999999987 6677777
Q ss_pred HHhhhhcCCCcchHHHHHHHHHHHHhCC---CCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecchH
Q 014393 158 ALMGKLGCSGDSSLQNALDLVQGLLSQI---PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM 231 (425)
Q Consensus 158 ~L~~~l~~~G~tsL~~AL~~A~~~L~~~---p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e~ 231 (425)
+|.++....|+|+++.||..|.+.|... .....+++|||++++...+..++.++++.+++.||+|++||+|.+.
T Consensus 87 ~i~~l~~~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~~~ 163 (178)
T 2xgg_A 87 AVLDMPYKKGSTNTSDGLKACKQILFTGSRPGREHVPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGHYV 163 (178)
T ss_dssp HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCTTCTTSCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC---
T ss_pred HHHhCCCCCCCccHHHHHHHHHHHhcCcccCCCCCCCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCCcC
Confidence 7776534678999999999999986421 1123446777766555444445678899999999999999999753
No 24
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=99.57 E-value=2.2e-14 Score=132.01 Aligned_cols=161 Identities=9% Similarity=0.008 Sum_probs=120.6
Q ss_pred ceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCC--CHHHHHHHHhhhhc
Q 014393 87 RYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLG 164 (425)
Q Consensus 87 R~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~--d~~~~i~~L~~~l~ 164 (425)
.+++++||.|.||.. +++..+++.+..|++.+....+..|+|||.| ++.+....||+. +.+++.++|.++..
T Consensus 22 ~DivfvlD~S~Sm~~-----~~~~~~k~~~~~~~~~l~~~~~~~rv~vv~f-s~~~~~~~~l~~~~~~~~~~~~i~~l~~ 95 (199)
T 3zqk_A 22 LDVAFVLEGSDKIGE-----ADFNRSKEFMEEVIQRMDVGQDSIHVTVLQY-SYMVTVEYPFSEAQSKGDILQRLREIRY 95 (199)
T ss_dssp CEEEEEEECCTTTCH-----HHHHHHHHHHHHHHHHSCBSTTSBEEEEEEE-SSSEEEEECTTSCCCHHHHHHHHHHCCC
T ss_pred cCEEEEEECCCCCCH-----HHHHHHHHHHHHHHHhcCCCCCceEEEEEEE-CCcccEEEecCCcCCHHHHHHHHHhCcC
Confidence 499999999999964 5789999999999998865567899999999 589999999985 67777787876433
Q ss_pred CCC-cchHHHHHHHHHHHHhCC---CCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecc--hHHHHHHHH
Q 014393 165 CSG-DSSLQNALDLVQGLLSQI---PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA--EMFICKHLC 238 (425)
Q Consensus 165 ~~G-~tsL~~AL~~A~~~L~~~---p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~--e~~iLk~iA 238 (425)
..| +|.++.||..|++.+... .....+++||+++++.+.|.. .+ + ..+|+|++||+|. +...|++||
T Consensus 96 ~gg~~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~d~v--~~----~-~~~v~v~~iGiG~~~~~~~L~~iA 168 (199)
T 3zqk_A 96 QGGNRTNTGLALRYLSDHSFLVSQGDREQAPNLVYMVTGNPASDEI--KR----L-PGDIQVVPIGVGPNANVQELERIG 168 (199)
T ss_dssp CCCSCCCHHHHHHHCCCCCTCGGGTCCTTSCEEEEEEECSCCSSCC--CC----C-CTTEEEEEEEESTTCCHHHHHHHH
T ss_pred CCCCcChHHHHHHHHHHHhhCcccCCCCCCCeEEEEEeCCCCchHH--HH----H-hCCCEEEEEEcCCCCCHHHHHHHh
Confidence 345 599999999999865321 012234567766654443322 11 1 3799999999984 579999999
Q ss_pred HhhCCeEEEecCHhHHHHHHHhcC
Q 014393 239 QDTGGSYSVALDESHFKELIMEHA 262 (425)
Q Consensus 239 ~~TGG~Y~~~~d~~~L~~lL~~~~ 262 (425)
. +|.++.+.|.+.|.+++.++.
T Consensus 169 ~--~~~~~~~~~~~~L~~~~~~l~ 190 (199)
T 3zqk_A 169 W--PNAPILIQDFETLPREAPDLV 190 (199)
T ss_dssp T--TSCCEEESCTTTHHHHHHHHH
T ss_pred C--CCceEEeCCHHHHHHHHHHHH
Confidence 7 455557788888888877654
No 25
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=99.56 E-value=2e-15 Score=136.71 Aligned_cols=160 Identities=14% Similarity=0.106 Sum_probs=114.9
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCH--HHHHHHHhhhhcC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSP--ESHIKALMGKLGC 165 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~--~~~i~~L~~~l~~ 165 (425)
+++++||.|+||.. .++..+++.+..|++.+ ..+..|+|||.| ++.+....||+... +++.+.+..+...
T Consensus 4 divfvlD~S~Sm~~-----~~~~~~k~~~~~~~~~l--~~~~~rv~vv~f-s~~~~~~~~l~~~~~~~~~~~~~~~i~~~ 75 (179)
T 1mjn_A 4 DLVFLFDGSMSLQP-----DEFQKILDFMKDVMKKC--SNTSYQFAAVQF-STSYKTEFDFSDYVKRKDPDALLKHVKHM 75 (179)
T ss_dssp EEEEEEECBTTCCH-----HHHHHHHHHHHHHHHHT--TTSSEEEEEEEE-SSSEEEEECHHHHHHHCCHHHHHTTCCCC
T ss_pred cEEEEEeCCCCCCH-----HHHHHHHHHHHHHHHHh--CCCCeEEEEEEE-CCceeEEEcCcccCCHHHHHHHHHhcccC
Confidence 89999999999964 57889999999999886 233469999999 58999999987421 1233334333234
Q ss_pred CCcchHHHHHHHHHHH-HhCC--CCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecchH------HHHHH
Q 014393 166 SGDSSLQNALDLVQGL-LSQI--PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM------FICKH 236 (425)
Q Consensus 166 ~G~tsL~~AL~~A~~~-L~~~--p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e~------~iLk~ 236 (425)
.|+|.++.||..|.+. +... ...+.+++||+++++...+.... +++.||+|++||+|... ..|++
T Consensus 76 ~g~T~~~~aL~~a~~~~~~~~~g~r~~~~~~iillTDG~~~~~~~~------~~~~~i~i~~igvG~~~~~~~~~~~L~~ 149 (179)
T 1mjn_A 76 LLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNI------DAAKDIIRYIIGIGKHFQTKESQETLHK 149 (179)
T ss_dssp CBCCCHHHHHHHHHHHTSSGGGTCCTTSEEEEEEEESSCCSSCSCC------GGGTTSEEEEEEESGGGCSHHHHHTTGG
T ss_pred CCCChHHHHHHHHHHHhcccccCCCCCCCeEEEEEcCCCCCCCcch------HHHCCCEEEEEEccccccccccHHHHHH
Confidence 6899999999999964 4321 11234567777665544343321 36789999999999753 68999
Q ss_pred HHHhhCCeE-EEecCHhHHHHHHHhc
Q 014393 237 LCQDTGGSY-SVALDESHFKELIMEH 261 (425)
Q Consensus 237 iA~~TGG~Y-~~~~d~~~L~~lL~~~ 261 (425)
||..++|.| |.+.|.+.|..++..+
T Consensus 150 iA~~~~~~~~~~~~~~~~L~~i~~~i 175 (179)
T 1mjn_A 150 FASKPASEFVKILDTFEKLKDLCTEL 175 (179)
T ss_dssp GSCSCHHHHEEEESSGGGSCCHHHHH
T ss_pred HhCCccHhcEEEeCCHHHHHHHHHHH
Confidence 999998864 6777878777766544
No 26
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=99.52 E-value=8.8e-14 Score=149.53 Aligned_cols=142 Identities=14% Similarity=0.137 Sum_probs=107.9
Q ss_pred eEEEEEeCCHhhhcCC--CCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCce----------EEeeCCCCCHHHH
Q 014393 88 YLYIVIDLSRAAAEMD--FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA----------NCLTDLGGSPESH 155 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D--~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A----------~~lspLT~d~~~~ 155 (425)
.+|++||+|+||.+.| ..|+||+++++.+.+|++...-.+|.++||||.|+ +.+ +++.||+.-....
T Consensus 37 ~ivf~IDvS~SM~~~d~~~~~srl~~a~~~v~~~i~~kii~~~~D~vGlVlfg-t~~t~n~l~~d~i~v~~~L~~~~~~~ 115 (609)
T 1jey_A 37 SLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYG-TEKDKNSVNFKNIYVLQELDNPGAKR 115 (609)
T ss_dssp EEEEEEECSGGGGCCCSSSSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEES-CSSCBSTTCCTTEEEEEEEECCCHHH
T ss_pred EEEEEEECCHHHcCCCCCCCCChHHHHHHHHHHHHHHhhCCCCCCeEEEEEEc-cCCCCCcCCCCCeEEEecCCCCCHHH
Confidence 4899999999999998 48999999999999999987778999999999995 666 5777776332334
Q ss_pred HHHHhhhh------------cCCCcchHHHHHHHHHHHHhCCCCC-CCcEEEEEEeCCCCCCcc-----CHHHHHHHHHh
Q 014393 156 IKALMGKL------------GCSGDSSLQNALDLVQGLLSQIPSY-GHREVLILYSALSTCDPG-----DIMETIQKCKE 217 (425)
Q Consensus 156 i~~L~~~l------------~~~G~tsL~~AL~~A~~~L~~~p~~-~sreILVI~~s~~t~dp~-----~i~~ti~~akk 217 (425)
++.|.+++ ...++++|++||..|..+|++.... .+|+|++|+++.+..+.. .+..+++.|++
T Consensus 116 ik~l~~l~~~~~~~~~~~~~g~~~~t~l~daL~~a~~~f~~~~~k~~~k~IiL~TDg~~p~~~~~~~~~~~~~~a~~l~~ 195 (609)
T 1jey_A 116 ILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRD 195 (609)
T ss_dssp HHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCSSCEEEEEEEEEESCSCTTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccchhhhhhcCCCCCCCHHHHHHHHHHHHHhhchhhcCCEEEEEcCCCCCCCCchHHHHHHHHHHHHHHh
Confidence 44454432 2245799999999999999875322 355566666543332221 35678999999
Q ss_pred CCcEEEEEEecch
Q 014393 218 SKIRCSVIGLSAE 230 (425)
Q Consensus 218 ~~I~V~vIglg~e 230 (425)
.||+|++||||.+
T Consensus 196 ~gI~i~~igig~~ 208 (609)
T 1jey_A 196 TGIFLDLMHLKKP 208 (609)
T ss_dssp HTEEEEEEEBCCT
T ss_pred cCcEEEEEecCCC
Confidence 9999999999975
No 27
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=99.43 E-value=4.3e-14 Score=160.85 Aligned_cols=162 Identities=15% Similarity=0.135 Sum_probs=125.1
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCC--CHHHHHHHHhhhhcC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLGC 165 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~--d~~~~i~~L~~~l~~ 165 (425)
+|+++||.|.||. ++++..+++.+..|++.|. .+..|+|||.| ++.+.+..||+. +..++.+++..+...
T Consensus 132 DIvfvlD~SgSm~-----~~~f~~~k~fv~~lv~~~~--~~~~rVglV~F-s~~~~~~~~lt~~~~~~~l~~ai~~i~~~ 203 (1095)
T 3k6s_A 132 DIVFLIDGSGSIS-----SRNFATMMNFVRAVISQFQ--RPSTQFSLMQF-SNKFQTHFTFEEFRRSSNPLSLLASVHQL 203 (1095)
T ss_dssp EEEEEEECCTTSC-----SHHHHHHHHHHHHHHHSSC--SSSEEEEEEEE-SSSEEEEECSHHHHSCSCGGGGTTTCCCC
T ss_pred cEEEEEcCCCCCC-----hhHHHHHHHHHHHHHHhcc--ccccEEEEEEE-CCeEEEEecCcccCCHHHHHHHHhhhhcc
Confidence 9999999999995 5789999999999998864 34589999999 589999999984 333444444443345
Q ss_pred CCcchHHHHHHHHHHHHhCCC---CCCCcEEEEEEeCCCC-CCccCHHHHHHHHHhCCcEEEEEEecch------HHHHH
Q 014393 166 SGDSSLQNALDLVQGLLSQIP---SYGHREVLILYSALST-CDPGDIMETIQKCKESKIRCSVIGLSAE------MFICK 235 (425)
Q Consensus 166 ~G~tsL~~AL~~A~~~L~~~p---~~~sreILVI~~s~~t-~dp~~i~~ti~~akk~~I~V~vIglg~e------~~iLk 235 (425)
.|+|.++.||..|++.+.... ....+++|||++++.. .|+.++.++++.+++.||+|++||+|.. ...|+
T Consensus 204 gG~T~~g~AL~~a~~~lf~~~~g~R~~~~kviIllTDG~~~~d~~~~~~~a~~~r~~GI~i~aIGVG~~~~~~~d~~eL~ 283 (1095)
T 3k6s_A 204 QGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELN 283 (1095)
T ss_dssp CSCBCHHHHHHHHHTTTTSTTTTCCSSSEEEEEEEESSCCBSCSSCHHHHHHHHHHHCEEECCEEBSSGGGSTTSSHHHH
T ss_pred cCCChHHHHHHHHHHhhccccccCCCCCCeEEEEEeCCCcCCCchhHHHHHHHHHHCCCEEEEEecccccccccCHHHHH
Confidence 789999999999998764321 1233457777665544 5777888999999999999999999975 68999
Q ss_pred HHHHhhCC-eEEEecCHhHHHHH
Q 014393 236 HLCQDTGG-SYSVALDESHFKEL 257 (425)
Q Consensus 236 ~iA~~TGG-~Y~~~~d~~~L~~l 257 (425)
+||..++| .++.+.+.+.|+++
T Consensus 284 ~IAs~p~g~~vf~v~d~~~L~~i 306 (1095)
T 3k6s_A 284 DIASKPSQEHIFKVEDFDALKDI 306 (1095)
T ss_dssp TTSCSSTTTSCCCBSCSGGGGSS
T ss_pred HHHcCCCCceEEEcCCHHHHHHH
Confidence 99999987 55666676665443
No 28
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=99.23 E-value=2.5e-11 Score=128.46 Aligned_cols=145 Identities=7% Similarity=-0.021 Sum_probs=95.7
Q ss_pred ceEEEEEeCCHhhhcCCCCCCHHHHHHHH--HHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCHHHHHHHHhhhh-
Q 014393 87 RYLYIVIDLSRAAAEMDFRPSRMAVVAKQ--VEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL- 163 (425)
Q Consensus 87 R~lvlvLD~S~SM~a~D~~P~RL~~a~~~--l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~~~~i~~L~~~l- 163 (425)
++++|+||+|+||...|.. +|+.. ++. +..|+.. .+.+++|||+|. + +....|++.+.. +.+.+..+.
T Consensus 369 ~~v~lvvD~SgSM~~~~~~-~~l~~-~~~Aa~l~~~~~----~~~d~vglv~Fs-~-~~~~~~~t~~~~-l~~~l~~l~~ 439 (538)
T 1yvr_A 369 KRFLLAIDVSASMNQRVLG-SILNA-SVVAAAMCMLVA----RTEKDSHMVAFS-D-EMLPCPITVNML-LHEVVEKMSD 439 (538)
T ss_dssp CCEEEEEECSGGGGSBSTT-SSCBH-HHHHHHHHHHHH----HHCSSEEEEEES-S-SEECCSCCTTSC-HHHHHHHHTT
T ss_pred ceEEEEEECccccCCCCCC-CcHHH-HHHHHHHHHHHh----ccCCceEEEEEC-C-CceEcCCCCccc-HHHHHHHHhc
Confidence 4999999999999998876 56666 444 4445432 345889999995 4 566778886533 333333322
Q ss_pred cCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhC-C--cEEEEEEecch----------
Q 014393 164 GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKES-K--IRCSVIGLSAE---------- 230 (425)
Q Consensus 164 ~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~-~--I~V~vIglg~e---------- 230 (425)
.+.|+|+++.||..|...- ...+.||||+++..+.+..+..++++.+++. | |++++||+|+.
T Consensus 440 ~~~GgT~i~~aL~~a~~~~-----~~~~~iIliTDg~~~~g~~~~~~~l~~~~~~~~~~v~l~~igig~~~~~~~~~~~~ 514 (538)
T 1yvr_A 440 ITMGSTDCALPMLWAQKTN-----TAADIFIVFTDCETNVEDVHPATALKQYREKMGIPAKLIVCAMTSNGFSIADPDDR 514 (538)
T ss_dssp CCCSCCCTTHHHHHHHHTT-----CCCSEEEEEECCCCCSSSCCHHHHHHHHHHHHTCCCEEEEEECSSSSEESSCTTCT
T ss_pred CCCCCCcHHHHHHHHHhcc-----CCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHhCCCcEEEEEEecCCCCcccCCCCC
Confidence 2678999999999998751 1223344444443332223456666555533 5 56699999863
Q ss_pred ---------HHHHHHHHHhhCCeE
Q 014393 231 ---------MFICKHLCQDTGGSY 245 (425)
Q Consensus 231 ---------~~iLk~iA~~TGG~Y 245 (425)
..+|+.||+.|||.|
T Consensus 515 ~~~~i~g~~e~~l~~Ia~~~~G~~ 538 (538)
T 1yvr_A 515 GMLDICGFDSGALDVIRNFTLDLI 538 (538)
T ss_dssp TEEEEETTCTTHHHHHHHHHTTC-
T ss_pred CceeeccCCHHHHHHHHHHhCCCC
Confidence 268999999999975
No 29
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=99.05 E-value=1.7e-09 Score=114.59 Aligned_cols=144 Identities=8% Similarity=-0.009 Sum_probs=95.9
Q ss_pred eEEEEEeCCHhhhcCCC----CCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCHHHHHHHHhhhh
Q 014393 88 YLYIVIDLSRAAAEMDF----RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL 163 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~----~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~~~~i~~L~~~l 163 (425)
+++|+||+|+||...+. ++++++.+...+ |+... . .+++|||+|. + .....|++.+ ..+.+.|..+.
T Consensus 364 ~~lv~vDvSgSM~~~~~~~~~k~~~~e~Aa~la--~~~~r--~--~d~v~lv~Fs-~-~~~~~~~~~~-~~l~~~l~~l~ 434 (535)
T 2nvo_A 364 RHLLALDVSGSMTCGDVAGVPGLTPNMAAAAMS--LIALR--T--EPDALTMGFA-E-QFRPLGITPR-DTLESAMQKAQ 434 (535)
T ss_dssp EEEEEECCSGGGGSCCGGGCTTCCHHHHHHHHH--HHHHH--H--SSEEEEEEEB-S-SEEECCCCTT-CCHHHHHHHTC
T ss_pred eEEEEEECCccccCCCCCCCCcccHHHHHHHHH--HHHcC--c--CCceEEEEEC-C-cceEcCCCcc-hhHHHHHHHHh
Confidence 89999999999987332 367877765443 44322 2 3589999995 4 4445677754 22334444332
Q ss_pred -cCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-CCCCccCHHHHHHHHHhC---CcEEEEEEecch--------
Q 014393 164 -GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSAL-STCDPGDIMETIQKCKES---KIRCSVIGLSAE-------- 230 (425)
Q Consensus 164 -~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~-~t~dp~~i~~ti~~akk~---~I~V~vIglg~e-------- 230 (425)
.+.|+|+++.+|..|..... ..+ +|||+++. ......+..++++.+++. +++|++|+||+.
T Consensus 435 ~~~~ggTdi~~~l~~a~~~~~-----~~~-~vIliTD~~~~~g~~~~~~al~~~r~~~~~~~klv~i~l~~~~~~~~~~~ 508 (535)
T 2nvo_A 435 SVSFGGTDCAQPILWAAQERL-----DVD-TFVVYTDNETWAGQVHPTVALDQYAQKMGRAPKLIVVGLTATEFSIADPQ 508 (535)
T ss_dssp CSSBCCCCTTHHHHHHHHTTC-----CCS-EEEEEESSCCCCCSSCHHHHHHHHHHHHSCCCEEEEEETTCSCCCCSCTT
T ss_pred hCCCCCccHHHHHHHHHHhcC-----CCC-EEEEEeCCCccCCCCCHHHHHHHHHHhhCCCCeEEEEeccCCCcccCCCC
Confidence 23689999999988755432 123 45555443 333333567788888876 899999999962
Q ss_pred -----------HHHHHHHHHhhCCeEE
Q 014393 231 -----------MFICKHLCQDTGGSYS 246 (425)
Q Consensus 231 -----------~~iLk~iA~~TGG~Y~ 246 (425)
..+|+.||+.|||.|+
T Consensus 509 ~~~~~~i~g~se~~l~~Ia~~~~G~~~ 535 (535)
T 2nvo_A 509 RRDMLDVVGFDAAAPNVMTAFARGEVL 535 (535)
T ss_dssp CSSEEEEEECCTTHHHHHHHHHTTCC-
T ss_pred CCCceeeeCCCHHHHHHHHHHhCCCcC
Confidence 2689999999999985
No 30
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=98.95 E-value=1.3e-09 Score=121.76 Aligned_cols=115 Identities=14% Similarity=0.166 Sum_probs=81.0
Q ss_pred hhccccceEEEEEeCCHhhhcCCCC-CCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEE---------------
Q 014393 81 IQKGLIRYLYIVIDLSRAAAEMDFR-PSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANC--------------- 144 (425)
Q Consensus 81 ~r~GiiR~lvlvLD~S~SM~a~D~~-P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~--------------- 144 (425)
.+.++ +||||||.|+||...++. .+||+.+++++..|++.+ ..+|.+|+|||.|. +.++.
T Consensus 221 ~~~~~--DIVfVLD~SGSM~~~~~~~~~Rl~~~K~a~~~~ld~L-~~~~~drVgLV~Fs-~~a~~~~~~~v~~~~~~~~g 296 (893)
T 2ww8_A 221 KSVPL--DVVILLDNSNSMSNIRNKNARRAERAGEATRSLIDKI-TSDSENRVALVTYA-STIFDGTEFTVEKGVADKNG 296 (893)
T ss_dssp TTCCE--EEEEEEECCGGGCTTHHHHCCHHHHHHHHHHHHHHHH-HTSTTCEEEEEEES-SSBCBSCEEEEECCEECTTC
T ss_pred cCCCc--cEEEEEeCCCCCCCcCccchhHHHHHHHHHHHHHHHh-hcCCCcEEEEEEec-Cccccccccccccccccccc
Confidence 34565 999999999999876543 349999999999999654 45788999999995 54421
Q ss_pred ------------------------eeCCCCCHHHHH---HHHhhh---------hcCCCcchHHHHHHHHHHHHhCCCCC
Q 014393 145 ------------------------LTDLGGSPESHI---KALMGK---------LGCSGDSSLQNALDLVQGLLSQIPSY 188 (425)
Q Consensus 145 ------------------------lspLT~d~~~~i---~~L~~~---------l~~~G~tsL~~AL~~A~~~L~~~p~~ 188 (425)
..|||.|..++. ..|.+. +.+.|+|.++.||.+|+++|......
T Consensus 297 ~~~n~~~~w~~~~t~~t~~~~~~~~lpLT~d~~~i~~lk~~I~~~~~~~~G~~~l~~~GGT~i~~AL~~A~~lL~~~~~~ 376 (893)
T 2ww8_A 297 KRLNDSLFWNYDQTSFTTNTKDYSYLKLTNDKNDIVELKNKVPTEAEDHDGNRLMYQFGATFTQKALMKADEILTQQARQ 376 (893)
T ss_dssp CEECCCTTSCTTCCEEEEECCBCCEEEEECCHHHHHHHHHHSCSCCCCSCTTSGGGGGCSCCHHHHHHHHHHHHHHHSCS
T ss_pred cccccccccccccccccccccccccccccCCHHHHHHHHHHHhhhccccccccccccCCCChHHHHHHHHHHHHHhhccc
Confidence 236777775442 444321 23468999999999999999742112
Q ss_pred CCcEEEEEEeC
Q 014393 189 GHREVLILYSA 199 (425)
Q Consensus 189 ~sreILVI~~s 199 (425)
..+++|||+++
T Consensus 377 ~~~kvIILLTD 387 (893)
T 2ww8_A 377 NSQKVIFHITD 387 (893)
T ss_dssp SSEEEEEEEES
T ss_pred CCCeEEEEEcC
Confidence 34556666654
No 31
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=98.60 E-value=1.9e-06 Score=80.94 Aligned_cols=162 Identities=17% Similarity=0.136 Sum_probs=114.7
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCCHHHHHHHHhhhhcCCC
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSG 167 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d~~~~i~~L~~~l~~~G 167 (425)
+||+++|+|.||.. -++.+++.+.++++++-..+...|+|++.|.+.......|||.|...+.+.+.... ..|
T Consensus 5 Dl~fl~D~S~SM~~------di~~lk~~~~~l~~~l~~~~~~~r~Gfg~f~Dk~~~~~l~lT~d~~~F~~~v~~~~-vsg 77 (212)
T 2iue_A 5 DLYFLMGLSGSAQG------HLSNVQTLGSDLLKALNEISRSGRIGFGSIVNMTFQHILKLTADSSQFQRELRKQL-VSG 77 (212)
T ss_dssp EEEEEEECCGGGTT------THHHHHHHHHHHHHHHHHHCSCEEEEEEEESSSCEEEEEEEESCHHHHHHHHHTCC-CCC
T ss_pred EEEEEEeCCCcchh------HHHHHHHHHHHHHHHHHhhCcCceEEEEEEEcCcceecCCcCCCHHHHHHHHhhcc-ccC
Confidence 89999999999974 38888888888888887666779999999998867778999999999999997642 222
Q ss_pred c----chHHHHHHHHHHH---HhCCCCCCCcEEEEEEeCCCCC-------------------------------CccCHH
Q 014393 168 D----SSLQNALDLVQGL---LSQIPSYGHREVLILYSALSTC-------------------------------DPGDIM 209 (425)
Q Consensus 168 ~----tsL~~AL~~A~~~---L~~~p~~~sreILVI~~s~~t~-------------------------------dp~~i~ 209 (425)
+ -+--.||..|+.. +.=. . .+++||++++...+ |+..+.
T Consensus 78 ~~D~PE~g~dal~qa~~c~~~i~Wr--~-a~rllvl~TDa~~H~~gDg~l~gi~~pnd~~chl~~g~y~~s~~~Dyps~~ 154 (212)
T 2iue_A 78 KLATPKGQLDAVVQVAICLGEIGWR--N-GTRFLVLVTDNDFHLAKDKTLGTRQNTSDGRCHLDDGMYRSRGEPDYQSVV 154 (212)
T ss_dssp CSSSSBCHHHHHHHHHHCHHHHTCC--S-SEEEEEEECSSCBCCTTGGGGGTCCSCCCSSCCBSSSBBGGGGSSCCCCHH
T ss_pred CCCCCchHHHHHHHHHHhhhhcccC--C-ccEEEEEECcCCccccCCccccccccCCccccccCCCeeccCcccCCCCHH
Confidence 1 1333455555532 3322 2 66788887642211 334667
Q ss_pred HHHHHHHhCCcEEEEEEecchHHHHHHHHHhhCCeEEEe--cCHhHHHHHHH
Q 014393 210 ETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVA--LDESHFKELIM 259 (425)
Q Consensus 210 ~ti~~akk~~I~V~vIglg~e~~iLk~iA~~TGG~Y~~~--~d~~~L~~lL~ 259 (425)
+..+.++++||.+....=.......+++++..+|..... .|...+.+|+.
T Consensus 155 q~~~~l~~~~i~~ifavt~~~~~~Y~~l~~~i~~s~v~~L~~dSsni~~li~ 206 (212)
T 2iue_A 155 QLASKLAENNIQPIFVVPSRMVKTYEKLTTFIPKLTIGELSDDSSNVAQLIR 206 (212)
T ss_dssp HHHHHHHHHTCEEEEEEEHHHHHHHHHHHHHSTTCEEEEESSCCHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEEEccchhHHHHHHHHHcccceeeeecCCcHHHHHHHH
Confidence 889999899987655544555678899999888887753 44555655553
No 32
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=98.56 E-value=1.1e-07 Score=90.91 Aligned_cols=89 Identities=15% Similarity=0.148 Sum_probs=70.5
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCc--eEEe-eCCCCCHHHHHHHHhhhhc
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGV--ANCL-TDLGGSPESHIKALMGKLG 164 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~--A~~l-spLT~d~~~~i~~L~~~l~ 164 (425)
+++|+||.|+||. .||..++..+.+++.++......+++|||+|.+.. ++.+ .|+|.+. .+...|.. +.
T Consensus 136 ~vvfLVDtSgSM~------~kl~~vk~al~~Ll~sl~~~~~~~~VavV~F~~~~~~~~~ll~pfT~~~-~~~~~l~~-L~ 207 (242)
T 3rag_A 136 HLVVCLDTSASMR------DKIPTVREAVRDLALSLKVRSGPLAVSVIAFPGKGEEATRLVQPFSSEV-NVAALEAE-LV 207 (242)
T ss_dssp EEEEEEECSGGGT------TTHHHHHHHHHHHHHHHTTSSSCEEEEEEEESCSTTCSCEEEEEEESSC-CHHHHHHH-CC
T ss_pred CEEEEEECcccHH------HHHHHHHHHHHHHHHHHhccCCCcEEEEEEECCCCccceeecCCCCChH-HHHHHHhh-CC
Confidence 9999999999996 38999999999999887644557999999996432 5555 4998876 33334443 35
Q ss_pred CCCcchHHHHHHHHHHHHhC
Q 014393 165 CSGDSSLQNALDLVQGLLSQ 184 (425)
Q Consensus 165 ~~G~tsL~~AL~~A~~~L~~ 184 (425)
..|.|.++.||..|+++|++
T Consensus 208 agG~Tplg~AL~~A~~~~~~ 227 (242)
T 3rag_A 208 ARGGTPTGPAIDHAADLLLS 227 (242)
T ss_dssp CCSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHH
Confidence 68899999999999999853
No 33
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=98.43 E-value=7.8e-07 Score=85.08 Aligned_cols=60 Identities=15% Similarity=0.230 Sum_probs=46.6
Q ss_pred CcEEEEEEeCC-CCCCccCHHHHHHHHHhCCcEEEEEEecch-------HHHHHHHHHhhCCeEEEecC
Q 014393 190 HREVLILYSAL-STCDPGDIMETIQKCKESKIRCSVIGLSAE-------MFICKHLCQDTGGSYSVALD 250 (425)
Q Consensus 190 sreILVI~~s~-~t~dp~~i~~ti~~akk~~I~V~vIglg~e-------~~iLk~iA~~TGG~Y~~~~d 250 (425)
..++|||++++ +++. ++..++++.|++.||+|++||+|.. ...|++||+.|||.||.+..
T Consensus 9 ~~k~iillTDG~~~~g-~~p~~aa~~a~~~gi~v~tIGig~~~~~~~~~~~~L~~IA~~tGG~yf~a~~ 76 (242)
T 3rag_A 9 TIRQILVITDGCSNIG-PDPVEAARRAHRHGIVVNVIGIVGRGDAGEQGYQEAHSIADAGGGMCRIVQP 76 (242)
T ss_dssp CEEEEEEEESSCCCSS-SCHHHHHHHHHHTTCEEEEEEECCSSSCTTCCCHHHHHHHHHTTSCEEEECG
T ss_pred CccEEEEEccCCCCCC-CCHHHHHHHHHHCCCEEEEEEecCCccccchhHHHHHHHHHhcCCeEEEeeH
Confidence 34455665544 4444 3677899999999999999999643 37899999999999999744
No 34
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=98.42 E-value=4.3e-06 Score=92.11 Aligned_cols=164 Identities=15% Similarity=0.167 Sum_probs=110.8
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCC-----------------
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----------------- 150 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~----------------- 150 (425)
..++|||+|.+.. +|..+++.++.+++.+ .|..+||||+| ++..++. .+..
T Consensus 134 ~~vFvIDvS~~a~-------~l~~l~~si~~~L~~L---p~~~~VGlITf-~~~v~~y-~l~~~~~~~~~vf~G~k~~~~ 201 (769)
T 2nut_A 134 IFLYVVDTCMEDE-------DLQALKESMQMSLSLL---PPTALVGLITF-GRMVQVH-ELGCEGISKSYVFRGTKDLSA 201 (769)
T ss_dssp EEEEEEECCSCHH-------HHHHHHHHHHHHHTTS---CTTCEEEEEEE-SSEEEEE-ESSCCSSCEEEEEETTSCCCS
T ss_pred EEEEEEECCccHH-------HHHHHHHHHHHHHHhC---CCCceEEEEEe-CCEEEEE-eCCCCCCccceeecCCccccH
Confidence 6789999998753 5899999999998753 35689999999 4665551 1111
Q ss_pred ----------------------C------------H---HHHH-HHHhhhhc--------CCCcchHHHHHHHHHHHHhC
Q 014393 151 ----------------------S------------P---ESHI-KALMGKLG--------CSGDSSLQNALDLVQGLLSQ 184 (425)
Q Consensus 151 ----------------------d------------~---~~~i-~~L~~~l~--------~~G~tsL~~AL~~A~~~L~~ 184 (425)
+ . +..+ +.|.++.. ..+.++++.||..|..+|+.
T Consensus 202 ~q~~~ml~v~d~~~~~~~~~~~~~f~~p~~~~lv~~~e~~~~i~~lLe~L~~~~~~~~~~~~~~~a~G~Al~~A~~lL~~ 281 (769)
T 2nut_A 202 KQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLEC 281 (769)
T ss_dssp HHHHHHHC-------------------CCCSSSEEHHHHHHHHHHHHHHCCCCSSCCCTTBCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCcccccccccccccCCCcccceeeeHHHHHHHHHHHHHhcccccccccCCCCCccchHHHHHHHHHHHhh
Confidence 0 0 1111 11222111 14568999999999999984
Q ss_pred CCCCCCcEEEEEEeCCCCCCccC------------------------------HHHHHHHHHhCCcEEEEEEecch---H
Q 014393 185 IPSYGHREVLILYSALSTCDPGD------------------------------IMETIQKCKESKIRCSVIGLSAE---M 231 (425)
Q Consensus 185 ~p~~~sreILVI~~s~~t~dp~~------------------------------i~~ti~~akk~~I~V~vIglg~e---~ 231 (425)
.-....++|+++.++.-+..||. +.+.+..+.++||.|++..++.+ .
T Consensus 282 ~~~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~ke~~~~~~~a~~fY~~la~~~~~~gi~VDlF~~~~~~vdl 361 (769)
T 2nut_A 282 TFPNTGARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGL 361 (769)
T ss_dssp HSCSSCCEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHTTCCTTHHHHHHHHHHHHHHHHHHTCEEEEEEECSSCCCH
T ss_pred cccCCCcEEEEEeCCCCCCCCCCCcCcccccccccccccccchhhhccchHHHHHHHHHHHHHCCeEEEEEeccCCccCh
Confidence 21123456999888755433332 23468888999999999999964 7
Q ss_pred HHHHHHHHhhCCeEEEecC--HhHHHHHHHhcCC
Q 014393 232 FICKHLCQDTGGSYSVALD--ESHFKELIMEHAP 263 (425)
Q Consensus 232 ~iLk~iA~~TGG~Y~~~~d--~~~L~~lL~~~~~ 263 (425)
..|+.+++.|||..+...+ ...+++-+...+.
T Consensus 362 a~l~~l~~~TGG~~~~~~~F~~~~~~~~l~~~~~ 395 (769)
T 2nut_A 362 LEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRVFT 395 (769)
T ss_dssp HHHTHHHHHSSCCEEEESCSSSHHHHHHHHHTTC
T ss_pred HHHHHHhhcCCceEEEcCCCchhhHHHHHHHHHh
Confidence 8999999999998887543 3345555555554
No 35
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=98.30 E-value=1.9e-05 Score=87.49 Aligned_cols=152 Identities=13% Similarity=0.198 Sum_probs=105.0
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEee---------------------
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT--------------------- 146 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~ls--------------------- 146 (425)
..++|||+|.++.+.. .|..+++.+..-++.+.+.+|..+||||+| ++..++..
T Consensus 189 ~yvFvIDvs~~av~~g----~l~~~~~si~~~L~~Lp~~~~~~~VGlITf-d~~V~~~~l~~~~~g~k~~~~q~~mlvv~ 263 (810)
T 1pcx_A 189 TYCFLIDVSQSSIKSG----LLATTINTLLQNLDSIPNHDERTRISILCV-DNAIHYFKIPLDSENNEESADQINMMDIA 263 (810)
T ss_dssp EEEEEEECSHHHHHHT----HHHHHHHHHHHHTTTSCCTTSCCEEEEEEE-SSSEEEEECCCGGGC-------CEEECCC
T ss_pred EEEEEEECChHHHhhh----HHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEecCccccCccccccchhhcccc
Confidence 7899999999875432 477888888887766555556789999999 35444321
Q ss_pred ---------------CCCCCHH---HHHHHHhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCcc
Q 014393 147 ---------------DLGGSPE---SHIKALMGKL--GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG 206 (425)
Q Consensus 147 ---------------pLT~d~~---~~i~~L~~~l--~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~ 206 (425)
|+..... .+++.|.... ...++++++.||..|..+|+.. .++|++++++.-+..||
T Consensus 264 dl~d~f~P~~~~~Lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~a~G~AL~~A~~lL~~~----GGrI~~F~sg~pt~GpG 339 (810)
T 1pcx_A 264 DLEEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSNLITNFALGPALKSAYHLIGGV----GGKIIVVSGTLPNLGIG 339 (810)
T ss_dssp CTTCC-----TTTSEETTTTHHHHHHHHHHHHHHTTTCCCCCCCHHHHHHHHHHHHTTT----CEEEEEEESSCCCSSTT
T ss_pred ccccccCCCcccccccHHHHHHHHHHHHHhhhhhccCCCCCCccHHHHHHHHHHHHHhc----CCEEEEEecCCCCCCCC
Confidence 1111111 1233333322 2356789999999999999863 35799888875443333
Q ss_pred C--------------------------HHHHHHHHHhCCcEEEEEEecc---hHHHHHHHHHhhCCeEEEe
Q 014393 207 D--------------------------IMETIQKCKESKIRCSVIGLSA---EMFICKHLCQDTGGSYSVA 248 (425)
Q Consensus 207 ~--------------------------i~~ti~~akk~~I~V~vIglg~---e~~iLk~iA~~TGG~Y~~~ 248 (425)
. +.+.+..+.+++|.|++..++. ++..|+.+++.|||.-+..
T Consensus 340 ~l~~r~~~~~~~~~ke~~~l~~~a~~fY~~la~~~~~~gi~VDlF~~s~~~~dla~l~~l~~~TGG~v~~y 410 (810)
T 1pcx_A 340 KLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRFTAGQTHFY 410 (810)
T ss_dssp CCCC--------------------CCHHHHHHHHHHHTTEEEEEEEEESSCCCHHHHHHHHHTTTCCEEEE
T ss_pred cccccccccccCcccchhhhcccchHHHHHHHHHHHHCCeEEEEEEccCCccChHHHHHHHhcCCcEEEEc
Confidence 1 1245778899999999999986 4789999999999976654
No 36
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.29 E-value=9.2e-06 Score=88.43 Aligned_cols=154 Identities=11% Similarity=0.069 Sum_probs=106.4
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCce-------------------------
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA------------------------- 142 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A------------------------- 142 (425)
+||++||+|.||.. =|+.+++.+.++++++-.....-|+|+++|.|+..
T Consensus 113 Dly~LmD~S~SM~d------di~~lk~l~~~l~~~l~~~t~~~r~Gfgsf~Dk~~~P~~~~~p~~~~~~pc~~~~~~c~~ 186 (690)
T 3fcs_B 113 DIYYLMDLSYSMKD------DLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLP 186 (690)
T ss_dssp EEEEEEECSGGGHH------HHHHTTTTTHHHHHHHHHHCSCEEEEEEEECCCSSTTTSCCCSTTTTTCTTSSSSSCCCC
T ss_pred cEEEEecCCcchHH------HHHHHHHHHHHHHHHHHhhCcCceEEeEEeeccccCCccccChhhhccCCCcCCCCCCCC
Confidence 99999999999974 56777777777777776666678999999986321
Q ss_pred ----EEeeCCCCCHHHHHHHHhhhhcCCCc----chHHHHHHHHH---HHHhCCCCCCCcEEEEEEeCCCC---------
Q 014393 143 ----NCLTDLGGSPESHIKALMGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALST--------- 202 (425)
Q Consensus 143 ----~~lspLT~d~~~~i~~L~~~l~~~G~----tsL~~AL~~A~---~~L~~~p~~~sreILVI~~s~~t--------- 202 (425)
..+.|||.|...+.+.+.... ..|+ -+--.||..|+ ..+.=. ...+++||++++...
T Consensus 187 ~f~f~~~l~lt~~~~~f~~~v~~~~-isgn~D~PE~g~dAl~qa~~c~~~igWr--~~a~rllv~~TDa~~H~agDg~l~ 263 (690)
T 3fcs_B 187 MFGYKHVLTLTDQVTRFNEEVKKQS-VSRNRDAPEGGFDAIMQATVCDEKIGWR--NDASHLLVFTTDAKTHIALDGRLA 263 (690)
T ss_dssp CCSEEEEEEEESCHHHHHHHHTTCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCC--SSSEEEEEEEESSCBCCTTGGGGG
T ss_pred CccceeecccCCCHHHHHHHhhcee-ccCCCCCCchHHHHHHHHhhcccccCCC--CCceEEEEEECCCccccCCCcccc
Confidence 134688999999988887643 1221 12334555555 334322 346678888764322
Q ss_pred -----------------------CCccCHHHHHHHHHhCCcEEEEEEecchHHHHHHHHHhhCCeEEEecC
Q 014393 203 -----------------------CDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALD 250 (425)
Q Consensus 203 -----------------------~dp~~i~~ti~~akk~~I~V~vIglg~e~~iLk~iA~~TGG~Y~~~~d 250 (425)
-|+..+.+..+.|++++|.+....-.....+.+++++.-.|.+...+.
T Consensus 264 gi~~pnd~~chl~~~~~y~~s~~~DypSi~ql~~~l~~~~i~~ifavt~~~~~~y~~l~~~i~~s~v~~l~ 334 (690)
T 3fcs_B 264 GIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLS 334 (690)
T ss_dssp TCCSCCCCCCCBCTTCBBGGGGTSCCCCHHHHHHHHHHTTCEEEEEEEGGGHHHHHHHHHHSTTCEEEEEC
T ss_pred ceecCCCcceeecCCCccccccccCCCCHHHHHHHHHHcCCeEEEEEeCCchhhHHHHHhhcCCceeeeec
Confidence 133357889999999999876666666678899999888887775433
No 37
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=98.17 E-value=3.8e-05 Score=86.06 Aligned_cols=152 Identities=13% Similarity=0.188 Sum_probs=104.1
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEe---------------------e
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCL---------------------T 146 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~l---------------------s 146 (425)
..++|||+|.+..+.. .|..+++.|..-++.+.+.+|..+||||+|. +..++. +
T Consensus 305 vyvFvIDvS~~av~~g----~l~~l~~sI~~~L~~LP~~~~~~~VGlITFd-s~Vh~y~l~~~~~g~k~~~~q~qmlvvs 379 (926)
T 1m2v_B 305 TYCFLIDVSQSSIKSG----LLATTINTLLQNLDSIPNHDERTRISILCVD-NAIHYFKIPLDSENNEESADQINMMDIA 379 (926)
T ss_dssp BEEEEEECSHHHHHSC----HHHHHHHHHHHTTTTSCCTTSCCEECEEEES-SSEEEEECCCC---------CCEEEEEC
T ss_pred EEEEEEECCHHHHhhh----HHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-CEEEEEecCCcccCCcccccchhhcccc
Confidence 6899999998865432 5778888888777655544556899999994 443322 1
Q ss_pred ---------------CCCCCHHH---HHHHHhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCcc
Q 014393 147 ---------------DLGGSPES---HIKALMGKL--GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG 206 (425)
Q Consensus 147 ---------------pLT~d~~~---~i~~L~~~l--~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~ 206 (425)
|+...... +++.|.... ....+++++.||..|..+|+.. .++|+++.++.-+..||
T Consensus 380 dl~d~f~P~~~~~Lv~l~e~~~~I~~lLe~L~~~~~~~~~~~~~~G~AL~aA~~lL~~~----GGrI~~F~sg~Pt~GpG 455 (926)
T 1m2v_B 380 DLEEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSNLITNFALGPALKSAYHLIGGV----GGKIIVVSGTLPNLGIG 455 (926)
T ss_dssp CCSSCCCSCSSSSSEETTTTHHHHHHHHHHHHHHTSSCCCCCCCHHHHHHHHHHHHTTT----CEEEEEEESSCCCSSTT
T ss_pred ccccccCCCcccccccHHHHHHHHHHHHHhhhhhhcCCCCCCccHHHHHHHHHHHHHhh----CCEEEEEecCCCCCCCC
Confidence 11111122 223333322 2356789999999999999863 45799988865443333
Q ss_pred C--------------------------HHHHHHHHHhCCcEEEEEEecc---hHHHHHHHHHhhCCeEEEe
Q 014393 207 D--------------------------IMETIQKCKESKIRCSVIGLSA---EMFICKHLCQDTGGSYSVA 248 (425)
Q Consensus 207 ~--------------------------i~~ti~~akk~~I~V~vIglg~---e~~iLk~iA~~TGG~Y~~~ 248 (425)
. +.+.+..+.+++|.||+..++. ++..|+.+++.|||.-+..
T Consensus 456 ~l~~re~~~~~~~~ke~~~ll~~a~~FYk~LA~~~~~~gisVDlF~~s~~~vdla~l~~l~~~TGG~v~~y 526 (926)
T 1m2v_B 456 KLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRFTAGQTHFY 526 (926)
T ss_dssp CCCCCCC----CCTTHHHHHTSCSSTHHHHHHHHHHHHTEEEEEEEEESSCCCHHHHHHHHHTTTCCEEEE
T ss_pred cccccccccccCcccchhhhccchHHHHHHHHHHHHHcCeEEEEEEccCCCcChHHHHHHHhcCCceEEEc
Confidence 1 1245788899999999999986 4789999999999976654
No 38
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=97.99 E-value=0.00027 Score=77.88 Aligned_cols=165 Identities=18% Similarity=0.214 Sum_probs=108.2
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCC----------------
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGS---------------- 151 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d---------------- 151 (425)
..++|||+|.++. .|..+++.|...++.+ .|..+||||+| ++..++ ..+..+
T Consensus 123 ~~vFvIDvs~~~~-------~l~~l~~sl~~~L~~L---p~~~~VGlITf-~~~V~~-y~l~~~~~~~~~V~~g~k~~~~ 190 (768)
T 1m2o_A 123 IFFFVVDLTSETE-------NLDSLKESIITSLSLL---PPNALIGLITY-GNVVQL-HDLSSETIDRCNVFRGDREYQL 190 (768)
T ss_dssp EEEEEEECCSCHH-------HHHHHHHHHHHHHHTS---CTTCEEEEEEE-SSEEEE-CCCSSSSSEEEEEEETTSCCCH
T ss_pred EEEEEEECCcCHH-------HHHHHHHHHHHHHHhC---CCCCEEEEEEE-CCEEEE-EECCCCCCcceeeecCCccccH
Confidence 6789999998874 4788888888888754 35689999999 344332 322211
Q ss_pred --H-----------------------------------------HHHH-HHHhhhhc---C-----CCcchHHHHHHHHH
Q 014393 152 --P-----------------------------------------ESHI-KALMGKLG---C-----SGDSSLQNALDLVQ 179 (425)
Q Consensus 152 --~-----------------------------------------~~~i-~~L~~~l~---~-----~G~tsL~~AL~~A~ 179 (425)
. +..+ +.|.++.. + .+.++++.||..|.
T Consensus 191 ~q~~~~l~~l~~~~~~~~~~~~~~~~f~p~~~~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~~~~G~Al~~A~ 270 (768)
T 1m2o_A 191 EALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIAS 270 (768)
T ss_dssp HHHHHHHHSCCCC---------------CCSSSGGGGSEEHHHHHHHHHHHHHTCCCSCSCCCTTBCCCCCHHHHHHHHH
T ss_pred HHHHHHHhhccccccCCccccccccccccccCCccceeeeHHHHHHHHHHHHHhccccccccCCCCCCcccHHHHHHHHH
Confidence 0 0011 11222111 1 24568999999999
Q ss_pred HHHhCCCCCCCcEEEEEEeCCCCCCccC-----------------------------H-HHHHHHHHhCCcEEEEEEecc
Q 014393 180 GLLSQIPSYGHREVLILYSALSTCDPGD-----------------------------I-METIQKCKESKIRCSVIGLSA 229 (425)
Q Consensus 180 ~~L~~~p~~~sreILVI~~s~~t~dp~~-----------------------------i-~~ti~~akk~~I~V~vIglg~ 229 (425)
.+|+..-....++|+++.++.-+..||. + .+.+..+.++||.|++..++.
T Consensus 271 ~ll~~~~~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~k~~~~~~~~a~~fY~~la~~~~~~gi~VDlF~~~~ 350 (768)
T 1m2o_A 271 LLLQGCYKNIPARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCY 350 (768)
T ss_dssp HHHHHHCTTSCCEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHHTCCTTHHHHHHHHHHHHHHHHHHTCEEEEEEECS
T ss_pred HHHhhccCCCCcEEEEEeCCCCCCCCccccccccccccccccccccchhhhcCchHHHHHHHHHHHHHCCeEEEEEEccC
Confidence 9998421123456998888755433331 1 234677888999999999986
Q ss_pred ---hHHHHHHHHHhhCCeEEEec--CHhHHHHHHHhcCCC
Q 014393 230 ---EMFICKHLCQDTGGSYSVAL--DESHFKELIMEHAPP 264 (425)
Q Consensus 230 ---e~~iLk~iA~~TGG~Y~~~~--d~~~L~~lL~~~~~p 264 (425)
++..|+.+++.|||.-+... +...|++-+...+.-
T Consensus 351 ~~~dla~l~~l~~~TGG~v~~y~~f~~~~~~~~l~r~l~~ 390 (768)
T 1m2o_A 351 DQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAK 390 (768)
T ss_dssp SCCSHHHHHHHHHHHTCCEEEESCTTSHHHHHHHHHTTCB
T ss_pred CccChHHHhhHhhcCCceEEEcCCCchHHHHHHHHHHHhh
Confidence 47899999999999766543 344566666666653
No 39
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.98 E-value=1e-05 Score=87.98 Aligned_cols=155 Identities=17% Similarity=0.130 Sum_probs=105.9
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCc--------------------------
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGV-------------------------- 141 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~-------------------------- 141 (425)
+||++||+|.||.. =|+.+++.+.++++++-.....-|+|+++|.|+.
T Consensus 106 Dly~LmD~S~SM~d------di~~lk~l~~~l~~~l~~~t~~~r~GfgsFvDk~~~P~~~~~p~~~~~Pc~~~~~~c~~~ 179 (687)
T 3k6s_B 106 DLYYLMDLSYSMLD------DLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPP 179 (687)
T ss_dssp EEEEEEECSSTTHH------HHHTTTTCCTTHHHHHHSSCCSCEEEEEEECCCSSTTSSCCSSTTTTCCCCSCCCCCCCC
T ss_pred eEEEEEcCCcchHH------HHHHHHHHHHHHHHHHHhhCcCcEEeeEEeeccccCCccccCchhccCCCCCCCCCcCCc
Confidence 99999999999974 4566677777777777666777999999998632
Q ss_pred --eEEeeCCCCCHHHHHHHHhhhhcCCCc----chHHHHHHHHH---HHHhCCCCCCCcEEEEEEeCCCC----------
Q 014393 142 --ANCLTDLGGSPESHIKALMGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALST---------- 202 (425)
Q Consensus 142 --A~~lspLT~d~~~~i~~L~~~l~~~G~----tsL~~AL~~A~---~~L~~~p~~~sreILVI~~s~~t---------- 202 (425)
...+.+||.|...+.+.+.... ..|+ -+--.||..|+ ..+.=. . .+++||++++...
T Consensus 180 f~f~~~l~lt~~~~~F~~~v~~~~-isgn~D~PE~g~dAl~qa~vc~~~igWr-~--a~rllV~~TDa~~H~agDg~l~g 255 (687)
T 3k6s_B 180 FAFRHVLKLTNNSNQFQTEVGKQL-ISGNLDAPEGGLDAMMQVAACPEEIGWR-N--VTRLLVFATDDGFHFAGDGKLGA 255 (687)
T ss_dssp CSCEEEEEEESCSHHHHHHHHTSC-CCCCSSSSCCHHHHHHHHTTCHHHHCCC-S--SCCEEEEECSSCCCCTTGGGGGT
T ss_pred ccceeecccCCCHHHHHHHHhhcc-ccCCCCCCchHHHHHHHHhhcccccCCc-c--ceEEEEEECCCccccCCCccccc
Confidence 1124678999999988887643 1121 12234555554 344322 2 5567777764321
Q ss_pred ---------------------CCccCHHHHHHHHHhCCcEEEEEEecchHHHHHHHHHhhCCeEEEecCHh
Q 014393 203 ---------------------CDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDES 252 (425)
Q Consensus 203 ---------------------~dp~~i~~ti~~akk~~I~V~vIglg~e~~iLk~iA~~TGG~Y~~~~d~~ 252 (425)
-|+..+.+..+.|++++|.+....-.....+.+++++.-+|.+...+..+
T Consensus 256 i~~pndg~Chl~~~~y~~s~~~DyPS~~ql~~~l~~~~I~~ifavt~~~~~~y~~l~~~i~~s~v~~L~~d 326 (687)
T 3k6s_B 256 ILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSED 326 (687)
T ss_dssp CCCCCCSCCCCSSSBCSSGGGSCCCCGGGHHHHHHHTTCBCCEEECGGGHHHHHHHHHHSSSCCEEECCTT
T ss_pred eecCCCCccccCCCccccccccCCCCHHHHHHHHHHcCCeEEEEEeccchhhHHHHHhhcCCceeeeeccc
Confidence 23334677899999999987666666677899999988888777655443
No 40
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=97.90 E-value=0.00068 Score=70.47 Aligned_cols=162 Identities=13% Similarity=0.093 Sum_probs=108.1
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCce-------------------------
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA------------------------- 142 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A------------------------- 142 (425)
+||+++|+|.||.. -|+.+++...++.+++-.....-|+|+..|.|+..
T Consensus 113 DLy~LmDlS~SM~d------dl~~lk~lg~~L~~~l~~~t~~~riGfgsFvDk~v~P~~~~~p~~~l~nPc~~~~~~c~p 186 (472)
T 3t3p_B 113 DIYYLMDLSYSMKD------DLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLP 186 (472)
T ss_dssp EEEEEEECSGGGHH------HHHHTTTHHHHHHHHHTTTCSCEEEEEEEECCCSSTTTSCCCSHHHHHCTTTTTTSCCCC
T ss_pred eEEEEEccCcchHH------HHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeccccCccccCChhhhhcCCCcccccCCCC
Confidence 99999999999974 57788888888888888777789999999987521
Q ss_pred ---E-EeeCCCCCHHHHHHHHhhhhcCCCc----chHHHHHHHHH---HHHhCCCCCCCcEEEEEEeCCC----------
Q 014393 143 ---N-CLTDLGGSPESHIKALMGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALS---------- 201 (425)
Q Consensus 143 ---~-~lspLT~d~~~~i~~L~~~l~~~G~----tsL~~AL~~A~---~~L~~~p~~~sreILVI~~s~~---------- 201 (425)
+ .+.|||.|...+.+.+.... ..|+ -+--.||..|+ ..+.=. ...+++||++++..
T Consensus 187 ~f~fr~~l~LT~d~~~F~~~V~~~~-iSGn~D~PEgg~dAl~qaavC~~~igWR--~~a~rllV~~TDa~~H~agDgkL~ 263 (472)
T 3t3p_B 187 MFGYKHVLTLTDQVTRFNEEVKKQS-VSRNRDAPEGGFDAIMQATVCDEKIGWR--NDASHLLVFTTDAKTHIALDGRLA 263 (472)
T ss_dssp CCSEEEEEEEESCHHHHHHHHHHCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCC--SSSEEEEEEEESSCBCCTTGGGGG
T ss_pred CcceeEeeccCCCHHHHHHHHhhcc-ccCCCCCCchHHHHHHHHhcchhhcCCC--CCceEEEEEECCCCcCcCCCcccc
Confidence 1 25788999999988887642 1121 12334555554 233322 23567888775421
Q ss_pred ----------------------CCCccCHHHHHHHHHhCCcEEEEEEecchHHHHHHHHHhhCCeEEEec--CHhHHHHH
Q 014393 202 ----------------------TCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVAL--DESHFKEL 257 (425)
Q Consensus 202 ----------------------t~dp~~i~~ti~~akk~~I~V~vIglg~e~~iLk~iA~~TGG~Y~~~~--d~~~L~~l 257 (425)
.-|+..+-+..+.+.++||.+-.-.-.....+.+++++.-.|...-.+ |...+-+|
T Consensus 264 GIv~pnDg~CHL~~~~~Y~~s~~~DYPSv~ql~~~l~e~nI~~IFAVt~~~~~~Y~~L~~~ip~s~vg~L~~dSsNiv~L 343 (472)
T 3t3p_B 264 GIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQL 343 (472)
T ss_dssp TCCCCCCCCCCBCTTCBBTTTTTSCCCCHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTSTTCEEEECCTTSTTHHHH
T ss_pred ceecCCCCceEECCCCcccccccCCCCCHHHHHHHHHhcCccEEEEEeccchhHHHHHHHhCCCceeeeccccchhHHHH
Confidence 124456778999999999874322233346788999988877766543 33344444
Q ss_pred H
Q 014393 258 I 258 (425)
Q Consensus 258 L 258 (425)
+
T Consensus 344 I 344 (472)
T 3t3p_B 344 I 344 (472)
T ss_dssp H
T ss_pred H
Confidence 3
No 41
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=97.89 E-value=0.00045 Score=71.39 Aligned_cols=159 Identities=18% Similarity=0.125 Sum_probs=110.0
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCc--------------------------
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGV-------------------------- 141 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~-------------------------- 141 (425)
+||+++|+|.||.. -|+..+....++++++-.....-|+|+..|.|+.
T Consensus 124 DLyyLmDlS~SM~d------dl~~lk~lg~~L~~~l~~~t~~~riGfGsFvDK~v~P~~~t~p~~~~nPC~~~~~c~~~f 197 (454)
T 3vi3_B 124 DLYYLMDLSYSMKD------DLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTTPF 197 (454)
T ss_dssp EEEEEEECSGGGHH------HHHHHTTHHHHHHHHHTTTCSSEEEEEEEECCCSSTTTSCCSTTTTTCCSCSSSCCCCCC
T ss_pred eEEEEecCCcchhh------HHHHHHHHHHHHHHHHHhcCCCeEEEEEEEeccccCCcccCChHHhcCCCcCccCCCCCc
Confidence 99999999999974 6788888889999888887788999999998641
Q ss_pred eE-EeeCCCCCHHHHHHHHhhhhc------CCCcchHHHHHHHHHH---HHhCCCCCCCcEEEEEEeCCC----------
Q 014393 142 AN-CLTDLGGSPESHIKALMGKLG------CSGDSSLQNALDLVQG---LLSQIPSYGHREVLILYSALS---------- 201 (425)
Q Consensus 142 A~-~lspLT~d~~~~i~~L~~~l~------~~G~tsL~~AL~~A~~---~L~~~p~~~sreILVI~~s~~---------- 201 (425)
.+ .+.|||.|...+.+.+..... |.| --.||..|.- .+.=. . .+++||++++..
T Consensus 198 ~fr~~l~LT~d~~~F~~~V~~~~isGn~D~PEg---g~DAl~Qaavc~~~igWR-~--a~rllV~~TDa~fH~agDgkL~ 271 (454)
T 3vi3_B 198 SYKNVLSLTNKGEVFNELVGKQRISGNLDSPEG---GFDAIMQVAVCGSLIGWR-N--VTRLLVFSTDAGFHFAGDGKLG 271 (454)
T ss_dssp SEEEEEEEESCHHHHHHHHTTCCCCCCSSSSBC---HHHHHHHHHHCHHHHTCC-S--SEEEEEEEESSCBCCTTTTGGG
T ss_pred ceeeeeecCCCHHHHHHHHhhccccCCCcCCch---hHHHHHHHhccccccCCc-c--ceEEEEEECCCCcCcCCCcccc
Confidence 11 367899999999888876421 223 2244444432 23222 2 667888775421
Q ss_pred ---------------------CCCccCHHHHHHHHHhCCcE-EEEEEecchHHHHHHHHHhhCCeEEEecCH--hHHHHH
Q 014393 202 ---------------------TCDPGDIMETIQKCKESKIR-CSVIGLSAEMFICKHLCQDTGGSYSVALDE--SHFKEL 257 (425)
Q Consensus 202 ---------------------t~dp~~i~~ti~~akk~~I~-V~vIglg~e~~iLk~iA~~TGG~Y~~~~d~--~~L~~l 257 (425)
.-|+..+-+..+.+.++||. |++| -.....+.+++++.-.|...-.+.+ ..+-+|
T Consensus 272 GIv~PNDg~CHL~~~~Yt~s~~~DYPSv~ql~~~l~e~nI~~IFAV-t~~~~~~Y~~L~~~ip~s~vg~Ls~dSsNiv~L 350 (454)
T 3vi3_B 272 GIVLPNDGQCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAV-TEEFQPVYKELKNLIPKSAVGTLSANSSNVIQL 350 (454)
T ss_dssp TCCSCCCCCCCEETTEECCTTTSCCCCHHHHHHHHHHTTEEEEEEE-EGGGHHHHHHHHHHSTTEEEEEECTTCTTHHHH
T ss_pred ceecCCCCccEeCCCcccccccCCCCCHHHHHHHHHhcCCcEEEEE-cCccchHHHHHHHhCCCceeeEccccchhHHHH
Confidence 13556788999999999997 4433 2334578899999988877754433 344444
Q ss_pred HH
Q 014393 258 IM 259 (425)
Q Consensus 258 L~ 259 (425)
+.
T Consensus 351 I~ 352 (454)
T 3vi3_B 351 II 352 (454)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 42
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=97.78 E-value=0.00074 Score=74.19 Aligned_cols=150 Identities=18% Similarity=0.243 Sum_probs=98.0
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEE--------------ee-------
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANC--------------LT------- 146 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~--------------ls------- 146 (425)
..++|||+|..-.+.. =|..+++.+...++.+. .++..+||+|+|. ...++ ++
T Consensus 162 ~yvFvIDvs~~a~~~g----~l~~~~~sl~~~L~~lp-~~~~~~VG~ITfd-~~vh~y~l~~~~~~~qmlvv~dl~d~f~ 235 (751)
T 3eh1_A 162 VYLFVLDVSHNAVEAG----YLTILCQSLLENLDKLP-GDSRTRIGFMTFD-STIHFYNLQEGLSQPQMLIVSDIDDVFL 235 (751)
T ss_dssp EEEEEEECSHHHHHHT----HHHHHHHHHHHHTTTSS-CCTTCEEEEEEES-SSEEEEECCTTCSSCEEEEESCTTCTTS
T ss_pred EEEEEEEccHhhhhhh----HHHHHHHHHHHHHHhcC-CCcCcEEEEEEeC-CEEEEEECCCCcccceeeccccccccCC
Confidence 7899999996543221 46667777776665432 3444589999994 43322 11
Q ss_pred C--------CCCCHHHHHHH-Hhhh---h--cCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCcc------
Q 014393 147 D--------LGGSPESHIKA-LMGK---L--GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG------ 206 (425)
Q Consensus 147 p--------LT~d~~~~i~~-L~~~---l--~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~------ 206 (425)
| +... +..++. |.++ . ....+.+++.||+.|..+|+.. .++|+++.++.-+..||
T Consensus 236 P~~~~~lv~l~e~-~~~i~~lL~~Lp~~~~~~~~~~~~~G~AL~aA~~ll~~~----GGrI~~F~sg~pt~GpG~l~~r~ 310 (751)
T 3eh1_A 236 PTPDSLLVNLYES-KELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPT----GGRVSVFQTQLPSLGAGLLQSRE 310 (751)
T ss_dssp CCGGGTSEETTTT-HHHHHHHHHHGGGTSTTCSCCCCCHHHHHHHHHHHHTTT----CEEEEEEECSCCCSSTTCCCCCC
T ss_pred CChhhhcccHHHH-HHHHHHHHHhhhHhhcCCCCCccchHHHHHHHHHHhhcC----CCEEEEEecCCCCCCCCcccccc
Confidence 1 1111 222222 2222 1 1234579999999999999753 45788888764443333
Q ss_pred ------------------CH-HHHHHHHHhCCcEEEEEEecc---hHHHHHHHHHhhCCeEEEe
Q 014393 207 ------------------DI-METIQKCKESKIRCSVIGLSA---EMFICKHLCQDTGGSYSVA 248 (425)
Q Consensus 207 ------------------~i-~~ti~~akk~~I~V~vIglg~---e~~iLk~iA~~TGG~Y~~~ 248 (425)
++ .+.+..+.+++|.||+..++. ++..|+.+++.|||.-+..
T Consensus 311 ~~~~~~~~ke~~~~~~a~~fY~~la~~~~~~~i~VDlF~~s~~~~dlatl~~l~~~TGG~v~~y 374 (751)
T 3eh1_A 311 DPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYY 374 (751)
T ss_dssp CSCGGGGSSSCTTCSCSCSHHHHHHHHHHHTTEEEEEEECCSSCCCHHHHTHHHHTTTCCEEEC
T ss_pred ccccCCCchhhhhhcchHHHHHHHHHHHHhcCceEEEEEccCcccChHhHHHHHhhcCceEEEe
Confidence 12 356888999999999999986 4789999999999987764
No 43
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=97.62 E-value=0.0005 Score=71.85 Aligned_cols=160 Identities=17% Similarity=0.176 Sum_probs=107.3
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCc--------------------------
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGV-------------------------- 141 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~-------------------------- 141 (425)
+||+++|+|.||.. -|+.+++...++.+++-.....-|+|+..|.|+.
T Consensus 134 DLyyLmDlS~SM~d------dl~~lk~lg~~L~~~l~~~t~~~RiGfGsFvDK~v~P~~~~~p~~l~~PC~~~~~~c~p~ 207 (503)
T 3v4v_B 134 DLYYLMDLSYSMKD------DLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSP 207 (503)
T ss_dssp EEEEEEECSGGGHH------HHHHHHHSSHHHHHHHTTTCSCEEEEEEEECCCSSTTTSCCCHHHHHCCSSCSSSCCCCC
T ss_pred eEEEEEecCcchhh------HHHHHHHHHHHHHHHHHhhCcCcEEeeeeecccccCCcccCCHHHhcCCCcCCCCCCCCC
Confidence 99999999999974 6788888888888888877788999999998641
Q ss_pred -eE-EeeCCCCCHHHHHHHHhhhhcCCCc----chHHHHHHHHH---HHHhCCCCCCCcEEEEEEeCCC-----------
Q 014393 142 -AN-CLTDLGGSPESHIKALMGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALS----------- 201 (425)
Q Consensus 142 -A~-~lspLT~d~~~~i~~L~~~l~~~G~----tsL~~AL~~A~---~~L~~~p~~~sreILVI~~s~~----------- 201 (425)
.+ -+.|||.|...+.+.+.... ..|+ -.--.||..|+ +.+.=. . .+++||++++..
T Consensus 208 f~fr~~l~LT~d~~~F~~~V~~~~-iSGnlD~PEggfDAlmQaavC~~~IgWR-~--a~rllV~~TDA~fH~agDgkLaG 283 (503)
T 3v4v_B 208 FSFHHVLSLTGDAQAFEREVGRQS-VSGNLDSPEGGFDAILQAALCQEQIGWR-N--VSRLLVFTSDDTFHTAGDGKLGG 283 (503)
T ss_dssp CSEEEEEEEESCSHHHHHHHTTCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCC-S--SEEEEEEEESSCBCCTTGGGTTT
T ss_pred cceEEEEEecCCHHHHHHHHhhcC-ccCCCCCCchHHHHHHHHhhcccccCCC-c--ceEEEEEECCCCcCcCCCccccc
Confidence 11 25788999888988887542 1121 12234555554 233322 2 456777765311
Q ss_pred ---------------------CCCccCHHHHHHHHHhCCcEEEEEEec-chHHHHHHHHHhhCCeEEEecCHh--HHHHH
Q 014393 202 ---------------------TCDPGDIMETIQKCKESKIRCSVIGLS-AEMFICKHLCQDTGGSYSVALDES--HFKEL 257 (425)
Q Consensus 202 ---------------------t~dp~~i~~ti~~akk~~I~V~vIglg-~e~~iLk~iA~~TGG~Y~~~~d~~--~L~~l 257 (425)
.-|+..+-+..+.+.++||.+- .++- ....+.+++++.-.|...-.+.++ .+-+|
T Consensus 284 Iv~pNDg~CHL~~~~~Yt~s~~~DYPSv~ql~~kL~ennI~~I-FAVt~~~~~~Y~~L~~~ip~s~vg~Ls~dSsNiv~L 362 (503)
T 3v4v_B 284 IFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPI-FAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQL 362 (503)
T ss_dssp CCSCCCSSCCBCTTSBBGGGGGSCCCCHHHHHHHHHHHTEEEE-EEECSSSHHHHHHHHTTSTTCEEEECCTTSCTHHHH
T ss_pred eecCCCCCeEECCCCccccccccCCCCHHHHHHHHHhcCCeEE-EEEcccchhHHHHHHHhCCCceeeEccccchhHHHH
Confidence 1244567788999999999643 3333 346789999988888776554433 34444
Q ss_pred H
Q 014393 258 I 258 (425)
Q Consensus 258 L 258 (425)
+
T Consensus 363 I 363 (503)
T 3v4v_B 363 I 363 (503)
T ss_dssp H
T ss_pred H
Confidence 3
No 44
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=97.53 E-value=0.0015 Score=71.88 Aligned_cols=155 Identities=13% Similarity=0.148 Sum_probs=100.5
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhcc----CCCCcEEEEeecCCceEE--------------ee---
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQ----NPLSQIGLVTVKDGVANC--------------LT--- 146 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~q----nP~sqlGvI~~~~g~A~~--------------ls--- 146 (425)
..++|||+|..--.. .-+..+++.++..+..+.+. .|..+||+|+|. ...++ ++
T Consensus 175 ~y~FvIDvs~~av~s----g~l~~~~~si~~~L~~lp~~~~~~~~~~~VG~ITfd-~~vh~y~l~~~~~~~q~~vv~dl~ 249 (766)
T 3eh2_A 175 AFIFMIDVSYNAIRT----GLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYN-KVLHFYNVKSSLAQPQMMVVSDVA 249 (766)
T ss_dssp EEEEEEECSHHHHHT----THHHHHHHHHHHHGGGCCCCSSCSSCCCEEEEEEES-SSEEEEECCTTCSSCEEEEECCTT
T ss_pred EEEEEEECchhhccc----hHHHHHHHHHHHHHHhCCcccccCCccceEEEEEeC-CEEEEEECCCCCCCceEEEecChh
Confidence 678999999653322 24777788888777654321 123689999994 33222 11
Q ss_pred ----CCC--------CCHH---HHHHHHhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-CCCCCcc--
Q 014393 147 ----DLG--------GSPE---SHIKALMGKL--GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSA-LSTCDPG-- 206 (425)
Q Consensus 147 ----pLT--------~d~~---~~i~~L~~~l--~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s-~~t~dp~-- 206 (425)
|+. .... .+++.|.+.. .+..++.++.||+.|+..++.. ...++|+++.++ ..+..||
T Consensus 250 d~f~P~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~t~~g~al~aa~~~l~~~--~~GGkI~~F~s~lP~t~GpG~l 327 (766)
T 3eh2_A 250 DMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGMEALKAA--ECAGKLFLFHTSLPIAEAPGKL 327 (766)
T ss_dssp TCCCCCCTTSSBCTTTTHHHHHHHHHHHHHHHTTCCCCCCCSHHHHHHHHHHHHHT--TCCEEEEEEECSCCCSSSTTCC
T ss_pred hhccccccceeEeHHHHHHHHHHHHHhhhhhccCCCCCcchHHHHHHHHHHHhccC--CCCcEEEEEecCCCCcCCCccc
Confidence 211 1111 1233333322 2456788999999999999753 235678888876 3322222
Q ss_pred ----------------------CH-HHHHHHHHhCCcEEEEEEecc---hHHHHHHHHHhhCCeEEEec
Q 014393 207 ----------------------DI-METIQKCKESKIRCSVIGLSA---EMFICKHLCQDTGGSYSVAL 249 (425)
Q Consensus 207 ----------------------~i-~~ti~~akk~~I~V~vIglg~---e~~iLk~iA~~TGG~Y~~~~ 249 (425)
++ .+.+..+.+++|.||+..++. ++..|+.+++.|||.-+...
T Consensus 328 ~~r~~~~~~~sdke~~~~~~a~~fY~~la~~~~~~~i~VDlF~~s~~~vdlatl~~l~~~TGG~v~~y~ 396 (766)
T 3eh2_A 328 KNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVYKYA 396 (766)
T ss_dssp CCCCCGGGTTSTTGGGGTSCSSTHHHHHHHHHHHHTEEEEEEECCSSCCCHHHHTHHHHHTTCCEEECT
T ss_pred ccccccccCCCcchhhhccchHHHHHHHHHHHHhCCeEEEEEEecCCCcChHHHHHHHhhcCceEEEeC
Confidence 23 356888999999999999986 47999999999999877653
No 45
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=97.50 E-value=0.0021 Score=70.85 Aligned_cols=157 Identities=12% Similarity=0.200 Sum_probs=100.6
Q ss_pred ceEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhcc----CCCCcEEEEeecCCceEE--------------e---
Q 014393 87 RYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQ----NPLSQIGLVTVKDGVANC--------------L--- 145 (425)
Q Consensus 87 R~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~q----nP~sqlGvI~~~~g~A~~--------------l--- 145 (425)
-..++|||+|..--.. .-+..+++.++..++.+.+. .+..+||+|+|. ...++ +
T Consensus 178 p~y~FvIDvs~~av~s----g~l~~~~~sl~~~L~~lP~~~~~~~~~~~VG~ITfd-~~vh~y~l~~~~~q~q~~vv~d~ 252 (770)
T 3efo_B 178 PAFIFMIDVSYSNIKN----GLVKLICEELKTMLEKIPKEEQEETSAIRVGFITYN-KVLHFFNVKSNLAQPQMMVVTDV 252 (770)
T ss_dssp CEEEEEEECSHHHHHT----THHHHHHHHHHHHGGGCCCCTTSSSCSCEEEEEEES-SSEEEEECCTTCSSCEEEEECCT
T ss_pred cEEEEEEEcchhhccc----hHHHHHHHHHHHHHHhCCccccccCccceEEEEEeC-CEEEEEeCCCcccCceEEEeccc
Confidence 3778999999663322 24777788887777554321 123699999994 33221 1
Q ss_pred ----eCCC--------CCH---HHHHHHHhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-CCCCcc-
Q 014393 146 ----TDLG--------GSP---ESHIKALMGKL--GCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSAL-STCDPG- 206 (425)
Q Consensus 146 ----spLT--------~d~---~~~i~~L~~~l--~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~-~t~dp~- 206 (425)
.|+. ... ..+++.|.+.. ....++.++.||+.|+..++.. ...++|+++.+++ .+..||
T Consensus 253 ~d~f~P~~~~~Lv~l~e~~~~i~~lL~~L~~~~~~~~~~~t~~g~al~aa~~~l~~~--~~GGkI~~F~s~lP~t~GpG~ 330 (770)
T 3efo_B 253 GEVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGMEALKAA--DCPGKLFIFHSSLPTAEAPGK 330 (770)
T ss_dssp TSCCCCCSSSSSBCTTTTHHHHHHHHHHHHHHHHTCCCCCCCCHHHHHHHHHHHHHH--TCCEEEEEEECSCCCSSSTTC
T ss_pred ccccCCCccceeeeHHHHHHHHHHHHHhhHhhccCCCCCcchHHHHHHHHHHHhccC--CCCcEEEEEecCCCCcCCCcc
Confidence 1211 111 12233333322 2345788999999999999753 2345788888763 322232
Q ss_pred -----------------------CHH-HHHHHHHhCCcEEEEEEecch---HHHHHHHHHhhCCeEEEecC
Q 014393 207 -----------------------DIM-ETIQKCKESKIRCSVIGLSAE---MFICKHLCQDTGGSYSVALD 250 (425)
Q Consensus 207 -----------------------~i~-~ti~~akk~~I~V~vIglg~e---~~iLk~iA~~TGG~Y~~~~d 250 (425)
++. +.+..+.+++|-||+..++.+ +..|+.+++.|||.-+...+
T Consensus 331 l~~r~~~~~~~t~ke~~~~~~a~~fY~~lA~~~~~~~i~VDlF~~s~~~vdlatl~~l~~~TGG~v~~y~~ 401 (770)
T 3efo_B 331 LKNRDDKKLVNTDKEKILFQPQTNVYDSLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNN 401 (770)
T ss_dssp CCCCCCCCCSSCSCGGGGGSCSSSHHHHHHHHHHHTTEEEEEEECCSSCCCHHHHTHHHHHTTCCEEECTT
T ss_pred ccccccccccCCcchhhhhcchHHHHHHHHHHHHHcCeEEEEEEecCCccChHHHHHHHhhcCceEEEecC
Confidence 223 468889999999999999864 78999999999998776543
No 46
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.28 E-value=0.087 Score=42.65 Aligned_cols=87 Identities=24% Similarity=0.494 Sum_probs=58.3
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF 367 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~~~C~ 367 (425)
.|.|+.|...|- +-|-.|+.|+..+.+...|.+-. ||.-. ....-.|.
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~----------------~~~~~~C~ 70 (124)
T 2dlq_A 7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR----------------SEQVFTCS 70 (124)
T ss_dssp SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCS----------------CCCCEECS
T ss_pred CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCC----------------CCCCeECC
Confidence 789999987664 35678999999999888887652 22110 01233688
Q ss_pred cccccccCCCC--------CCCcceeCCCCCcccccccchhhhcc-CC
Q 014393 368 GCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHES-LH 406 (425)
Q Consensus 368 ~C~~~~~~~~~--------~~~~~~~C~~C~~~fC~dCD~fiHe~-lh 406 (425)
-|.+.|..... .....|.|+.|+..|=..=++-.|.. .|
T Consensus 71 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H 118 (124)
T 2dlq_A 71 VCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118 (124)
T ss_dssp SSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred CCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence 88888865320 12235899999998877777777753 44
No 47
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=91.56 E-value=0.031 Score=49.40 Aligned_cols=91 Identities=25% Similarity=0.563 Sum_probs=53.6
Q ss_pred eEEcCCCCccccC--------------CCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc
Q 014393 304 GYTCPRCKARVCE--------------LPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF 367 (425)
Q Consensus 304 Gy~Cp~C~s~~C~--------------lP~~C~~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~~~C~ 367 (425)
.|.|+.|+..|-. -|-.|+.|+..+.+...|.+-. |+- - ..-.|.
T Consensus 49 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~ 109 (190)
T 2i13_A 49 PYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG--E-----------------KPYACP 109 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT--C-----------------CCEECT
T ss_pred CccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCC--C-----------------CCCcCC
Confidence 5778888766542 4557888888777777776532 221 0 123577
Q ss_pred cccccccCCCC--------CCCcceeCCCCCcccccccchhhhccC------CCCCCCCC
Q 014393 368 GCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHESL------HNCPGCES 413 (425)
Q Consensus 368 ~C~~~~~~~~~--------~~~~~~~C~~C~~~fC~dCD~fiHe~l------h~CPgC~~ 413 (425)
.|.+.|..... .....|.|+.|+..|=..=++..|... ..|+.|..
T Consensus 110 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~ 169 (190)
T 2i13_A 110 ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGK 169 (190)
T ss_dssp TTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred CCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCC
Confidence 77766654310 012347777777777766666666443 35777753
No 48
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=90.92 E-value=0.18 Score=39.99 Aligned_cols=52 Identities=19% Similarity=0.438 Sum_probs=36.8
Q ss_pred CCCCCCCCccccccccccCCCCCCCcceeCCCCCcccccccchhh--------hccCCCCCCCC
Q 014393 357 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI--------HESLHNCPGCE 412 (425)
Q Consensus 357 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fi--------He~lh~CPgC~ 412 (425)
|.+......|..|.++|.-- .-++-|-.|+.+||.+|-.+- ......|-.|.
T Consensus 15 W~pd~~~~~C~~C~~~Fs~~----~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~ 74 (84)
T 1z2q_A 15 WQEDEDAPACNGCGCVFTTT----VRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACY 74 (84)
T ss_dssp CCCTTTCCBCTTTCCBCCTT----SCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHH
T ss_pred cccCCCCCCCcCcCCccccc----hhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHH
Confidence 44444567899999999632 236899999999999997652 33445565554
No 49
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=90.72 E-value=0.14 Score=43.57 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=27.3
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+.|+..|- +-|-.|+.|+..+.+..+|.+-
T Consensus 22 ~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H 69 (133)
T 2lt7_A 22 YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH 69 (133)
T ss_dssp EEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHH
T ss_pred CeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhh
Confidence 599999998775 3466899999999988888664
No 50
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=90.70 E-value=0.16 Score=40.05 Aligned_cols=37 Identities=22% Similarity=0.555 Sum_probs=29.2
Q ss_pred CCCCCccccccccccCCCCCCCcceeCCCCCcccccccchh
Q 014393 360 NRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 400 (425)
Q Consensus 360 ~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f 400 (425)
......|..|..+|.-- .-++-|-.|+.+||.+|-.+
T Consensus 16 d~~~~~C~~C~~~Fs~~----~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 16 DDEATHCRQCEKEFSIS----RRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCCCBCTTTCCBCBTT----BCCEECTTTCCEECSGGGCE
T ss_pred CccCCcccCcCCcccCc----cccccCCCCCCEEChHHhCC
Confidence 33456899999999632 23688999999999999764
No 51
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=90.67 E-value=0.27 Score=34.76 Aligned_cols=47 Identities=26% Similarity=0.408 Sum_probs=35.2
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 413 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~ 413 (425)
...|.-|...|..+. .....+.|++.||.+|-.-.-..-..||-|..
T Consensus 5 ~~~C~IC~~~~~~~~----~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~ 51 (55)
T 1iym_A 5 GVECAVCLAELEDGE----EARFLPRCGHGFHAECVDMWLGSHSTCPLCRL 51 (55)
T ss_dssp SCCCTTTCCCCCTTS----CCEECSSSCCEECTTHHHHTTTTCCSCSSSCC
T ss_pred CCcCccCCccccCCC----ceEECCCCCCcccHHHHHHHHHcCCcCcCCCC
Confidence 457999998775421 23557789999999997655566789999965
No 52
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.48 E-value=0.2 Score=39.65 Aligned_cols=40 Identities=20% Similarity=0.559 Sum_probs=30.2
Q ss_pred CCCCCCCCccccccccccCCCCCCCcceeCCCCCcccccccchh
Q 014393 357 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 400 (425)
Q Consensus 357 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f 400 (425)
|.+......|..|..+|.-- .-++-|-.|+.+||..|-.+
T Consensus 8 W~pd~~~~~C~~C~~~F~~~----~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 8 RYPTNNFGNCTGCSATFSVL----KKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp SCSCCCCSSCSSSCCCCCSS----SCCEECSSSCCEECTTTSCE
T ss_pred cccCCCCCcCcCcCCccccc----hhhhhhcCCCcEEChhhcCC
Confidence 44444566899999999532 23688999999999999653
No 53
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=90.46 E-value=0.21 Score=38.61 Aligned_cols=73 Identities=18% Similarity=0.347 Sum_probs=48.5
Q ss_pred CCCCCCCCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCC--------CCCCcceeCC
Q 014393 317 LPTDCRICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSG--------NKPGLYVACP 387 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLarsyh-hlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~--------~~~~~~~~C~ 387 (425)
-|-.|+.|+..+.+...|.+-.. |. .. ..-.|..|...|.... -.....|.|+
T Consensus 7 ~~~~C~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 68 (96)
T 2dmd_A 7 GPHKCEVCGKCFSRKDKLKTHMRCHT-GV-----------------KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68 (96)
T ss_dssp CCCCBTTTTBCCCCHHHHHHHGGGCC-CC-----------------CSEECSSSCCEESSHHHHHHHHHHSCCCCCEECS
T ss_pred cCeECCCCCCccCCHHHHHHHHHhcC-CC-----------------CCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCC
Confidence 35567788888888777765432 11 00 1235888887775431 0122359999
Q ss_pred CCCcccccccchhhhccCCC
Q 014393 388 KCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 388 ~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|+..|=..=++..|...|.
T Consensus 69 ~C~~~f~~~~~l~~H~~~h~ 88 (96)
T 2dmd_A 69 ICPYASRNSSQLTVHLRSHT 88 (96)
T ss_dssp SSSCEESSHHHHHHHHTTCC
T ss_pred CCCCccCCHHHHHHHHHHhc
Confidence 99999998888888988775
No 54
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.89 E-value=0.24 Score=37.31 Aligned_cols=54 Identities=20% Similarity=0.507 Sum_probs=38.9
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCCCccccC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVAN 423 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~~~~ 423 (425)
...|.-|...|.++ ..-..|++.||.+|=.-.-+.-..||-|........+..|
T Consensus 15 ~~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 68 (72)
T 2djb_A 15 YILCSICKGYLIDA-------TTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLSG 68 (72)
T ss_dssp GGSCTTTSSCCSSC-------EECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSCCC
T ss_pred CCCCCCCChHHHCc-------CEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccccccc
Confidence 45799998777542 3456899999999965444556799999886665555544
No 55
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=89.71 E-value=0.12 Score=41.98 Aligned_cols=52 Identities=27% Similarity=0.609 Sum_probs=38.1
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccchhhhccC-CCCCCCCCCCCCCcccc
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL-HNCPGCESLRHSNPIVA 422 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~l-h~CPgC~~~~~~~~~~~ 422 (425)
..|.-|+..|.. ...|..|++.||.+|=.-.-..- ..||-|-.......++.
T Consensus 23 ~~C~IC~~~~~~-------p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~ 75 (100)
T 3lrq_A 23 FRCFICMEKLRD-------ARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVN 75 (100)
T ss_dssp TBCTTTCSBCSS-------EEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEE
T ss_pred CCCccCCccccC-------ccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHh
Confidence 479999977753 35678999999999965444444 69999987665554443
No 56
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=89.65 E-value=0.19 Score=40.60 Aligned_cols=78 Identities=19% Similarity=0.440 Sum_probs=55.8
Q ss_pred CCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCC-----------CCCCcc
Q 014393 317 LPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSG-----------NKPGLY 383 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~-----------~~~~~~ 383 (425)
-|-.|+.|+..+.+...|.+-. |+- . ..-.|.-|...|.... ......
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~ 66 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYLKVHNRKHTG--E-----------------KPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66 (124)
T ss_dssp SSCCCTTTCCCCSSHHHHHHHHHHHSS--C-----------------CSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC
T ss_pred CCCCCCCCCCcCCCHHHHHHHHHhCCC--C-----------------CCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC
Confidence 4678999999999999887642 321 1 1235889988885431 123346
Q ss_pred eeCCCCCcccccccchhhhccCC------CCCCCCC
Q 014393 384 VACPKCKKHFCLECDIYIHESLH------NCPGCES 413 (425)
Q Consensus 384 ~~C~~C~~~fC~dCD~fiHe~lh------~CPgC~~ 413 (425)
|.|+.|+..|=..=++..|...| .|+.|..
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~ 102 (124)
T 2dlq_A 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ 102 (124)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCC
T ss_pred eECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccc
Confidence 99999999998888888776554 5999864
No 57
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=89.57 E-value=0.57 Score=35.59 Aligned_cols=57 Identities=21% Similarity=0.340 Sum_probs=39.1
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCCCccccC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVAN 423 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~~~~ 423 (425)
....|.-|+..|..+. ...--.|++.||.+|-.-.-+.-..||-|........+..|
T Consensus 14 ~~~~C~IC~~~~~~~~-----~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 70 (78)
T 2ect_A 14 SGLECPVCKEDYALGE-----SVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATN 70 (78)
T ss_dssp SSCCCTTTTSCCCTTS-----CEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCSCCC
T ss_pred CCCCCeeCCccccCCC-----CEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcccCCC
Confidence 4568999998775431 12122499999999987555566899999876665554443
No 58
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=89.30 E-value=0.19 Score=42.96 Aligned_cols=35 Identities=23% Similarity=0.632 Sum_probs=28.3
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchh
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 400 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f 400 (425)
....|+.|..+|.-- .-++-|-.|+.+||..|-.+
T Consensus 68 ~~~~C~~C~~~Fs~~----~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 68 EVQNCMACGKGFSVT----VRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp GCCBCTTTCCBCCSS----SCCEECTTTCCEECGGGSCE
T ss_pred CCCCCcCcCCccccc----cccccCCCCCeEEChHHhCC
Confidence 356899999999632 23689999999999999765
No 59
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=89.12 E-value=0.35 Score=36.92 Aligned_cols=53 Identities=28% Similarity=0.501 Sum_probs=36.3
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhcc------CCCCCCCCCCCCCCcccc
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES------LHNCPGCESLRHSNPIVA 422 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~------lh~CPgC~~~~~~~~~~~ 422 (425)
....|.-|...+..+ ... .|++.||.+|-.-.-+. -..||.|........+..
T Consensus 18 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~ 76 (85)
T 2ecw_A 18 EEVTCPICLELLKEP-------VSA-DCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKP 76 (85)
T ss_dssp TTTSCTTTCSCCSSC-------EEC-TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEE
T ss_pred cCCCCcCCChhhCcc-------eeC-CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCc
Confidence 355899999777542 234 49999999997543333 678999987655444443
No 60
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=89.10 E-value=0.21 Score=40.18 Aligned_cols=35 Identities=26% Similarity=0.534 Sum_probs=28.2
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchh
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 400 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f 400 (425)
....|..|..+|.-- .-++.|..|+.+||..|-.+
T Consensus 19 ~~~~C~~C~~~F~~~----~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFT----KRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp GCCBCTTTCCBCCSS----SCCEECTTTCCEECGGGSCE
T ss_pred cCCcCcCCCCcccch----hhCccccCCCCEECCcccCC
Confidence 456899999999632 23689999999999999765
No 61
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=89.00 E-value=0.17 Score=39.99 Aligned_cols=43 Identities=26% Similarity=0.577 Sum_probs=29.4
Q ss_pred ccccccccccCCC--------CCCCcceeCCCCCcccccccchhhhccCCC
Q 014393 365 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 365 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|..|.+.|.... -.....|.|+.|+..|-..=++..|...|.
T Consensus 47 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~ 97 (106)
T 2ee8_A 47 TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97 (106)
T ss_dssp BCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred CCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhC
Confidence 4666766664321 011235889999999998888888887774
No 62
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=88.71 E-value=0.42 Score=36.26 Aligned_cols=55 Identities=22% Similarity=0.527 Sum_probs=37.9
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhcc--CCCCCCCCCC-CCCCccccCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES--LHNCPGCESL-RHSNPIVANE 424 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~--lh~CPgC~~~-~~~~~~~~~~ 424 (425)
...|.-|...|.++ ..-+.|++.||.+|=.-.-.. ...||-|... ...+.++.|.
T Consensus 15 ~~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~ 72 (74)
T 2yur_A 15 ELLCLICKDIMTDA-------VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALSGPS 72 (74)
T ss_dssp GGSCSSSCCCCTTC-------EECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTTTTCTT
T ss_pred CCCCcCCChHHhCC-------eEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCccccccCC
Confidence 45799998777543 345669999999995433332 3689999874 4556666653
No 63
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=88.54 E-value=0.061 Score=44.90 Aligned_cols=92 Identities=17% Similarity=0.458 Sum_probs=56.2
Q ss_pred EcCCCCccccCCCCCCCCCCceecCchhHHhhhcccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCccee
Q 014393 306 TCPRCKARVCELPTDCRICGLQLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVA 385 (425)
Q Consensus 306 ~Cp~C~s~~C~lP~~C~~C~l~Lvs~phLarsyhhlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~ 385 (425)
+|-.|....-+-...||+|+..+-.. .++.+ |.. .....|..|...|..+... .....
T Consensus 36 fc~~Ci~~~~~~~~~CP~Cr~~~~~~-----~l~~l-----~i~-----------~~~~~C~iC~~~~~~~~~~-~~~~~ 93 (133)
T 4ap4_A 36 FCSQCLRDSLKNANTCPTCRKKINHK-----RYHPI-----YIG-----------SGTVSCPICMDGYSEIVQN-GRLIV 93 (133)
T ss_dssp EEHHHHHHHHTTCSBCTTTCCBCTTT-----CEEEC-----BCS-----------SSSCBCTTTCCBHHHHHHT-TCCEE
T ss_pred hhHHHHHHHHHhCCCCCCCCCcCccc-----ccccc-----ccC-----------CCCCCCCCCCCcccccccc-CcceE
Confidence 34444444445567899999876321 12222 111 1245799999777542100 01235
Q ss_pred CCCCCcccccccchhhhccCCCCCCCCCCCCCCc
Q 014393 386 CPKCKKHFCLECDIYIHESLHNCPGCESLRHSNP 419 (425)
Q Consensus 386 C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~ 419 (425)
...|++.||.+|-.=-.+.-..||-|........
T Consensus 94 ~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 127 (133)
T 4ap4_A 94 STECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 127 (133)
T ss_dssp EETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred eCCCCChhhHHHHHHHHHcCCCCCCCCCcCChhc
Confidence 6789999999997666667789999987655443
No 64
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=88.53 E-value=0.13 Score=45.23 Aligned_cols=84 Identities=27% Similarity=0.545 Sum_probs=60.7
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF 367 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~~~C~ 367 (425)
.|.|+.|...|- +-|-.|+.|+..+.+...|.+-. |+- - ..-.|.
T Consensus 77 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~ 137 (190)
T 2i13_A 77 PYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG--E-----------------KPYKCP 137 (190)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC--C-----------------CCEECT
T ss_pred CccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC--C-----------------CCeECC
Confidence 699999988764 35678999999999988887642 221 0 123699
Q ss_pred cccccccCCCC--------CCCcceeCCCCCcccccccchhhhccCC
Q 014393 368 GCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 368 ~C~~~~~~~~~--------~~~~~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.+.|..... .....|.|+.|+..|=..=++-.|...|
T Consensus 138 ~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H 184 (190)
T 2i13_A 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184 (190)
T ss_dssp TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhc
Confidence 99988865420 1223699999999998777777777666
No 65
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=88.00 E-value=0.24 Score=35.19 Aligned_cols=24 Identities=33% Similarity=0.881 Sum_probs=20.9
Q ss_pred eEEcCCCCcccc----------CCCC--CCCCCCce
Q 014393 304 GYTCPRCKARVC----------ELPT--DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C----------~lP~--~C~~C~l~ 327 (425)
-|+|++|+-+|= ++|- .||+||..
T Consensus 4 ~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCc
Confidence 599999999986 6888 89999964
No 66
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=87.30 E-value=0.25 Score=39.53 Aligned_cols=50 Identities=18% Similarity=0.418 Sum_probs=36.1
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCCCcc
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 420 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~ 420 (425)
..|.-|...|.++ ...+.|++.||.+|=.-.-+.-..||.|........+
T Consensus 23 ~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l 72 (99)
T 2y43_A 23 LRCGICFEYFNIA-------MIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDL 72 (99)
T ss_dssp TBCTTTCSBCSSE-------EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGC
T ss_pred CCcccCChhhCCc-------CEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhC
Confidence 4799999777532 3456899999999965544455799999875554333
No 67
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.29 E-value=0.45 Score=36.02 Aligned_cols=50 Identities=18% Similarity=0.386 Sum_probs=36.3
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
....|.-|+..|..+. .+..-.|++.||.+|-.-.-..-..||-|.....
T Consensus 22 ~~~~C~IC~~~~~~~~-----~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQ-----LLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTC-----EEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCC-----eEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 4568999998875431 2344459999999997665566679999976544
No 68
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.22 E-value=0.74 Score=35.05 Aligned_cols=54 Identities=26% Similarity=0.522 Sum_probs=36.9
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhcc------CCCCCCCCCCCCCCccccC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES------LHNCPGCESLRHSNPIVAN 423 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~------lh~CPgC~~~~~~~~~~~~ 423 (425)
....|.-|...+..+ ..- .|++.||.+|-.-.-.. -..||.|........+..|
T Consensus 18 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n 77 (85)
T 2ecv_A 18 EEVTCPICLELLTQP-------LSL-DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 77 (85)
T ss_dssp CCCCCTTTCSCCSSC-------BCC-SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCS
T ss_pred CCCCCCCCCcccCCc-------eeC-CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCcc
Confidence 356899999777543 122 69999999997544333 6799999876554444433
No 69
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=86.93 E-value=0.66 Score=36.36 Aligned_cols=47 Identities=26% Similarity=0.664 Sum_probs=33.2
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccch-hh-hccCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YI-HESLHNCPGCESLR 415 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~-fi-He~lh~CPgC~~~~ 415 (425)
..-.|.-|...|.++ ..-+.|++.||..|=. ++ ...-..||-|....
T Consensus 12 ~~~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 12 DELLCLICKDIMTDA-------VVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp TTTEETTTTEECSSC-------EECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCCCCCCChhhcCc-------eECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 456899999777543 3456699999999953 32 22346999998753
No 70
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=86.20 E-value=0.3 Score=43.89 Aligned_cols=24 Identities=38% Similarity=0.919 Sum_probs=20.7
Q ss_pred eEEcCCCCcccc-CCCCCCCCCCce
Q 014393 304 GYTCPRCKARVC-ELPTDCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C-~lP~~C~~C~l~ 327 (425)
.|+|++|+-++= +.|..||+||-.
T Consensus 138 ~~~C~~CG~i~~~~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 138 VYICPICGYTAVDEAPEYCPVCGAP 162 (170)
T ss_dssp EEECTTTCCEEESCCCSBCTTTCCB
T ss_pred eeEeCCCCCeeCCCCCCCCCCCCCC
Confidence 899999999875 578899999953
No 71
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=85.53 E-value=0.49 Score=36.41 Aligned_cols=32 Identities=22% Similarity=0.500 Sum_probs=26.4
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccch
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI 399 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~ 399 (425)
..|..|+++|.-- .-++-|-.|+.+||.+|-.
T Consensus 12 ~~C~~C~~~F~~~----~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 12 DACMICSKKFSLL----NRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp SBCTTTCCBCBTT----BCCEECTTTCCEECGGGSC
T ss_pred CcccCCCCccCCc----cccccCCCCCEEEcccccC
Confidence 4799999999632 2368999999999999974
No 72
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=85.45 E-value=0.14 Score=43.62 Aligned_cols=46 Identities=24% Similarity=0.683 Sum_probs=31.9
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCE 412 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~ 412 (425)
...|.+|..+|.-- .-+..|-.|+.+||..|--+--.....|-.|-
T Consensus 19 ~~~C~~C~~~Fs~~----~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~ 64 (120)
T 1y02_A 19 EPSCKSCGAHFANT----ARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQ 64 (120)
T ss_dssp -CCCTTTCCCCSSG----GGCEECTTTCCEECGGGEEC----CCEEHHHH
T ss_pred cCcccCcCCccccc----cccccCCCCCCeeCHHHhCCCCCCceECHHHH
Confidence 34799999999532 23588999999999999776544466666664
No 73
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=85.37 E-value=0.91 Score=31.79 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=34.9
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 415 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~ 415 (425)
...|.-|...|.... .......|++.||.+|-.-.-..-..||-|....
T Consensus 5 ~~~C~IC~~~~~~~~----~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 53 (55)
T 2ecm_A 5 SSGCPICLEDIHTSR----VVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPS 53 (55)
T ss_dssp CCSCTTTCCCCCTTT----SCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSS
T ss_pred CCcCcccChhhcCCC----cCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcC
Confidence 457999997775321 2345667999999999765544448999997543
No 74
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=85.34 E-value=0.8 Score=34.60 Aligned_cols=54 Identities=22% Similarity=0.411 Sum_probs=36.2
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhcc-------CCCCCCCCCCCCCCccccC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-------LHNCPGCESLRHSNPIVAN 423 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~-------lh~CPgC~~~~~~~~~~~~ 423 (425)
....|.-|...|.++. .. .|++.||.+|=.-.-+. -..||-|........+..|
T Consensus 11 ~~~~C~IC~~~~~~p~-------~l-~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~~n 71 (79)
T 2egp_A 11 EEVTCPICLELLTEPL-------SL-DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQAN 71 (79)
T ss_dssp CCCEETTTTEECSSCC-------CC-SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGGTC
T ss_pred cCCCCcCCCcccCCee-------EC-CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCCcC
Confidence 4568999998775431 12 59999999996532222 6789999876554444433
No 75
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=85.29 E-value=0.61 Score=37.35 Aligned_cols=47 Identities=23% Similarity=0.646 Sum_probs=34.3
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhh-------hccCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI-------HESLHNCPGCE 412 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fi-------He~lh~CPgC~ 412 (425)
....|..|..+|.-- .-++-|-.|+.+||..|-.+- .+....|-.|.
T Consensus 8 ~~~~C~~C~~~F~~~----~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~ 61 (88)
T 1wfk_A 8 MESRCYGCAVKFTLF----KKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCH 61 (88)
T ss_dssp CCSBCTTTCCBCCSS----SCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHH
T ss_pred cCCCCcCcCCcccCc----cccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHH
Confidence 345899999999632 236899999999999997642 34455666664
No 76
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=84.76 E-value=0.75 Score=34.89 Aligned_cols=42 Identities=26% Similarity=0.613 Sum_probs=29.7
Q ss_pred CCCCCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCC
Q 014393 359 RNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 410 (425)
Q Consensus 359 ~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPg 410 (425)
.......|..|.+.+.- ..|.| .|+..||..=- |-.-|+|++
T Consensus 11 ~~~~~~rC~~C~kkvgl------~~f~C-rCg~~FC~~HR---~~e~H~C~f 52 (64)
T 1wg2_A 11 PVRPNNRCFSCNKKVGV------MGFKC-KCGSTFCGSHR---YPEKHECSF 52 (64)
T ss_dssp CSCCSCSCTTTCCCCTT------SCEEC-TTSCEECSSSC---SSTTTTCCC
T ss_pred CCCcCCcChhhCCcccc------cCeEe-ecCCEecccCC---CccccCCCc
Confidence 33456789999876531 25999 99999997632 445788875
No 77
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=84.21 E-value=0.5 Score=36.29 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=27.6
Q ss_pred ccccccccccCCC----------CCCCcceeCCCCCcccccccchhhhc-cCCC
Q 014393 365 TCFGCQQSLLSSG----------NKPGLYVACPKCKKHFCLECDIYIHE-SLHN 407 (425)
Q Consensus 365 ~C~~C~~~~~~~~----------~~~~~~~~C~~C~~~fC~dCD~fiHe-~lh~ 407 (425)
.|.-|.+.|.... ......|.|+.|+..|=..=++-.|- ..|.
T Consensus 37 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 90 (95)
T 2yt9_A 37 SCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90 (95)
T ss_dssp ECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred cCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcC
Confidence 4777776665321 11124588999999988777777775 3553
No 78
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=84.08 E-value=0.99 Score=36.10 Aligned_cols=40 Identities=23% Similarity=0.512 Sum_probs=29.3
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 410 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPg 410 (425)
....|+.|.+.+.- ...|.| +|+..||.. --|-.-|+|++
T Consensus 24 ~~~rC~~C~kkvgl-----~~~f~C-rCg~~FC~~---HRy~e~H~C~f 63 (85)
T 1wff_A 24 IMKHCFLCGKKTGL-----ATSFEC-RCGNNFCAS---HRYAEAHGCNY 63 (85)
T ss_dssp CCCBCSSSCCBCSS-----SSCEEC-TTCCEECTT---TCSTGGGTCCS
T ss_pred cCccchhhCCeecc-----cCCeEc-CCCCEeccc---CCCccCCCCcc
Confidence 45689999976642 125999 599999975 33457899988
No 79
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=84.06 E-value=0.11 Score=38.83 Aligned_cols=70 Identities=23% Similarity=0.446 Sum_probs=42.4
Q ss_pred CCCCCCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCcceeCCCC
Q 014393 319 TDCRICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVACPKC 389 (425)
Q Consensus 319 ~~C~~C~l~Lvs~phLarsyh-hlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~C~~C 389 (425)
-.|+.|+..+.+...|.+-.- |. .. ..-.|..|...|..... .....|.|+.|
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 63 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHS-DT-----------------RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHH-TC-----------------CCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTT
T ss_pred ccCCCCcccccCchhHHHHHHHcC-CC-----------------CCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCc
Confidence 357788888888887765321 11 00 12357788877754310 01235999999
Q ss_pred CcccccccchhhhccCC
Q 014393 390 KKHFCLECDIYIHESLH 406 (425)
Q Consensus 390 ~~~fC~dCD~fiHe~lh 406 (425)
+..|=..=++..|...|
T Consensus 64 ~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 64 GKAFSQSSNLITHSRKH 80 (82)
T ss_dssp SCEESSHHHHHHHHHHH
T ss_pred chhhCChHHHHHHHHhh
Confidence 99887666666665433
No 80
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.75 E-value=0.93 Score=33.96 Aligned_cols=50 Identities=24% Similarity=0.420 Sum_probs=34.7
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
....|.-|+..|..+. ..... .|++.||.+|-.-.-..-..||-|-....
T Consensus 14 ~~~~C~IC~~~~~~~~----~~~~~-~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRD----ELGIC-PCKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp CSCBCSSSCCBCCSSS----CEEEE-TTTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred CCCCCcCCCcccCCCC----cEEEc-CCCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 4568999998875431 12223 49999999997655555669999976443
No 81
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=83.73 E-value=0.58 Score=37.10 Aligned_cols=39 Identities=26% Similarity=0.714 Sum_probs=29.4
Q ss_pred ccccccccccCCCCCCCcceeCCCCCcccccccchhh---hccC
Q 014393 365 TCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI---HESL 405 (425)
Q Consensus 365 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fi---He~l 405 (425)
.|..|...+..... ...-.||.|+..||..|-.-- |+-+
T Consensus 27 wCP~C~~~~~~~~~--~~~v~C~~C~~~FC~~C~~~w~~~H~~~ 68 (86)
T 2ct7_A 27 WCAQCSFGFIYERE--QLEATCPQCHQTFCVRCKRQWEEQHRGR 68 (86)
T ss_dssp CCSSSCCCEECCCS--CSCEECTTTCCEECSSSCSBCCTTTTTS
T ss_pred ECcCCCchheecCC--CCceEeCCCCCccccccCCchhhcCCCC
Confidence 59999876644321 234689999999999999877 7754
No 82
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=83.35 E-value=0.41 Score=43.66 Aligned_cols=24 Identities=21% Similarity=0.502 Sum_probs=21.2
Q ss_pred eEEcCCCCcccc--CCCCCCCCCCce
Q 014393 304 GYTCPRCKARVC--ELPTDCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C--~lP~~C~~C~l~ 327 (425)
-|+|+.|+-++= ++|..||+||..
T Consensus 155 ~~~C~~CG~~~~g~~~p~~CP~C~~~ 180 (191)
T 1lko_A 155 KWRCRNCGYVHEGTGAPELCPACAHP 180 (191)
T ss_dssp EEEETTTCCEEEEEECCSBCTTTCCB
T ss_pred eEEECCCCCEeeCCCCCCCCCCCcCC
Confidence 799999999984 689999999974
No 83
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=83.00 E-value=2 Score=30.74 Aligned_cols=42 Identities=24% Similarity=0.425 Sum_probs=30.3
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 415 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~ 415 (425)
...|.-|...|.++. --.|++.||..|=.- .-..||-|....
T Consensus 6 ~~~C~IC~~~~~~p~--------~l~CgH~fC~~Ci~~---~~~~CP~Cr~~~ 47 (56)
T 1bor_A 6 FLRCQQCQAEAKCPK--------LLPCLHTLCSGCLEA---SGMQCPICQAPW 47 (56)
T ss_dssp CSSCSSSCSSCBCCS--------CSTTSCCSBTTTCSS---SSSSCSSCCSSS
T ss_pred CCCceEeCCccCCeE--------EcCCCCcccHHHHcc---CCCCCCcCCcEe
Confidence 457999997776431 225999999999433 566899997643
No 84
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=82.90 E-value=1 Score=33.25 Aligned_cols=50 Identities=20% Similarity=0.257 Sum_probs=34.6
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
....|.-|...|.... ....-.|++.||.+|-.-.-..-..||-|.....
T Consensus 13 ~~~~C~IC~~~~~~~~-----~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 13 TEEKCTICLSILEEGE-----DVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 62 (69)
T ss_dssp CCCSBTTTTBCCCSSS-----CEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSC
T ss_pred CCCCCeeCCccccCCC-----cEEEeCCCCHHHHHHHHHHHHcCCCCcCcCcccc
Confidence 4568999987774321 2334469999999997654445567999976443
No 85
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=82.57 E-value=0.62 Score=34.22 Aligned_cols=24 Identities=29% Similarity=0.688 Sum_probs=20.8
Q ss_pred eEEcCCCCccccC-----------------CCC--CCCCCCce
Q 014393 304 GYTCPRCKARVCE-----------------LPT--DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C~-----------------lP~--~C~~C~l~ 327 (425)
-|+|+.|+-+|=. ||. .||+||..
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~ 45 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVG 45 (55)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCC
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 5999999999875 888 89999964
No 86
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=82.12 E-value=1.5 Score=40.85 Aligned_cols=33 Identities=21% Similarity=0.531 Sum_probs=27.1
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccchh
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 400 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f 400 (425)
..|..|..+|.-- .-++-|..|+.+||..|..+
T Consensus 165 ~~C~~C~~~F~~~----~RrhHCR~CG~v~C~~Cs~~ 197 (226)
T 3zyq_A 165 EECHRCRVQFGVM----TRKHHCRACGQIFCGKCSSK 197 (226)
T ss_dssp SBCTTTCCBCBTT----BCCEECTTTCCEECTTTCCE
T ss_pred CCCcCcCCCCCcc----ccccccCCCcCEeChhhcCC
Confidence 4899999999632 23689999999999999864
No 87
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=81.95 E-value=0.63 Score=37.85 Aligned_cols=48 Identities=23% Similarity=0.549 Sum_probs=34.9
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHS 417 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~ 417 (425)
...|.-|...|.+ ......|++.||..|=.-.-+.-..||-|......
T Consensus 15 ~~~C~IC~~~~~~-------p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 15 HLMCVLCGGYFID-------ATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GTBCTTTSSBCSS-------EEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred cCCCccCChHHhC-------cCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 4479999877753 24566899999999965444445899999875443
No 88
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=81.93 E-value=0.64 Score=36.91 Aligned_cols=24 Identities=29% Similarity=0.737 Sum_probs=21.0
Q ss_pred eEEcCCCCccccC-----------------CCC--CCCCCCce
Q 014393 304 GYTCPRCKARVCE-----------------LPT--DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C~-----------------lP~--~C~~C~l~ 327 (425)
-|+|++|+-+|=. ||. .||+||..
T Consensus 27 ~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 27 LFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred eEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 7999999999974 887 89999963
No 89
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.91 E-value=0.95 Score=36.15 Aligned_cols=74 Identities=12% Similarity=0.165 Sum_probs=43.9
Q ss_pred CCCCCCCceecCchhHHhhhcccCCCCCCcccCccCCCCCCCCCCCccccccccc--cCCCC--------CCCcceeCCC
Q 014393 319 TDCRICGLQLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSL--LSSGN--------KPGLYVACPK 388 (425)
Q Consensus 319 ~~C~~C~l~Lvs~phLarsyhhlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~--~~~~~--------~~~~~~~C~~ 388 (425)
-.|+.|+..+.+...|.+-... -..+.+. ....|..|...| ..... .....|.|+.
T Consensus 20 ~~C~~C~k~f~~~~~L~~H~~~---~~h~~~~-----------~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~ 85 (115)
T 2dmi_A 20 FRCKDCSAAYDTLVELTVHMNE---TGHYRDD-----------NHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY 85 (115)
T ss_dssp EEBSSSSCEESSHHHHHHHHHH---TCCCBCS-----------CCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS
T ss_pred EECCccCchhcCHHHHHHHHHH---hCccccC-----------CCccCCCCCcccccccHHHHHHHhhccCCCcceECCC
Confidence 3566678888888877664321 0001110 112377887776 43321 1234699999
Q ss_pred CCcccccccchhhhccCC
Q 014393 389 CKKHFCLECDIYIHESLH 406 (425)
Q Consensus 389 C~~~fC~dCD~fiHe~lh 406 (425)
|+..|=..=++-.|...|
T Consensus 86 C~k~f~~~~~L~~H~~~h 103 (115)
T 2dmi_A 86 CGHSFESLQDLSVHMIKT 103 (115)
T ss_dssp SCCBCSSHHHHHHHHHHT
T ss_pred CCCccCCHHHHHHHHHHh
Confidence 999998888887776543
No 90
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=81.68 E-value=1.2 Score=32.71 Aligned_cols=47 Identities=19% Similarity=0.369 Sum_probs=33.8
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
...|.-|...+..+ .....|++.||.+|-.-.-+.-..||-|.....
T Consensus 5 ~~~C~IC~~~~~~~-------~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNY-------SMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSC-------EEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCC-------cEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 45799998776432 234579999999997554455689999976443
No 91
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=81.15 E-value=1 Score=34.12 Aligned_cols=54 Identities=9% Similarity=0.075 Sum_probs=36.4
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhcc-CCCCCCCCCCCCCCccccC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLRHSNPIVAN 423 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~-lh~CPgC~~~~~~~~~~~~ 423 (425)
..-.|.-|...|.++ ..- .|++.||..|=.-.-+. -..||-|........+..|
T Consensus 7 ~~~~C~IC~~~~~~P-------v~~-~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n 61 (78)
T 1t1h_A 7 EYFRCPISLELMKDP-------VIV-STGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPN 61 (78)
T ss_dssp SSSSCTTTSCCCSSE-------EEE-TTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEEC
T ss_pred ccCCCCCccccccCC-------EEc-CCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccC
Confidence 355899999777543 222 59999999995433333 6789999876554444433
No 92
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=80.69 E-value=0.4 Score=38.35 Aligned_cols=70 Identities=26% Similarity=0.529 Sum_probs=36.6
Q ss_pred CCCCC--CCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCccee
Q 014393 318 PTDCR--ICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVA 385 (425)
Q Consensus 318 P~~C~--~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~ 385 (425)
|-.|+ .|+..+.+...|.+-. |+- . ..-.|..|.+.|..... .....|.
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~ 96 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRRHTG--V-----------------KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFS 96 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHC--C-----------------CCEECTTTCCEESCHHHHHHHHHHHHTCCCEE
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHcCC--C-----------------CCccCCccCchhCCHHHHHHHHHHhcCCCCee
Confidence 44666 5777777766665431 220 0 12246677666653310 0122477
Q ss_pred C--CCCCcccccccchhhhccCC
Q 014393 386 C--PKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 386 C--~~C~~~fC~dCD~fiHe~lh 406 (425)
| +.|+..|=..-++-.|...|
T Consensus 97 C~~~~C~~~f~~~~~L~~H~~~H 119 (119)
T 2jp9_A 97 CRWPSCQKKFARSDELVRHHNMH 119 (119)
T ss_dssp CCSTTCCCEESSHHHHHHHHHTC
T ss_pred CCCCCCccccCCHHHHHHHHhcC
Confidence 7 67777776555555554443
No 93
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=80.25 E-value=1.3 Score=35.69 Aligned_cols=50 Identities=22% Similarity=0.506 Sum_probs=33.1
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccchhhhccC---CCCCCCCCCCCCCccc
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL---HNCPGCESLRHSNPIV 421 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~l---h~CPgC~~~~~~~~~~ 421 (425)
..|.-|...+..+ .. ..|++.||.+|=.-.-+.- ..||-|........+.
T Consensus 22 ~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~ 74 (112)
T 1jm7_A 22 LECPICLELIKEP-------VS-TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74 (112)
T ss_dssp TSCSSSCCCCSSC-------CB-CTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCB
T ss_pred CCCcccChhhcCe-------EE-CCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcC
Confidence 4699998777543 11 3699999999954333322 4899998755544443
No 94
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=80.22 E-value=0.88 Score=42.12 Aligned_cols=33 Identities=21% Similarity=0.609 Sum_probs=27.1
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccchh
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 400 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f 400 (425)
..|..|..+|.-- .-++-|-.|+.+||..|--+
T Consensus 162 ~~C~~C~~~F~~~----~rrhhCr~CG~v~C~~Cs~~ 194 (220)
T 1dvp_A 162 RVCHRCRVEFTFT----NRKHHCRNCGQVFCGQCTAK 194 (220)
T ss_dssp SBCTTTCCBCCSS----SCCEECTTTCCEECSTTSCE
T ss_pred CccCCCCCccCCc----ccccccCCcCCEEChHHhCC
Confidence 5899999999632 23689999999999999764
No 95
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=80.14 E-value=0.67 Score=34.27 Aligned_cols=58 Identities=17% Similarity=0.412 Sum_probs=39.5
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCCCcc
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 420 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~ 420 (425)
....|.-|...+..+.. ......-..|++.||.+|=.-.-+.-..||.|-.......+
T Consensus 9 ~~~~C~IC~~~~~~~~~-~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQ-NGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 66 (71)
T ss_dssp TCCBCTTTCCBHHHHHT-TTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCSC
T ss_pred CCCCCcccChhhhcccc-ccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhhe
Confidence 45689999987754310 01124567899999999976554555799999876555443
No 96
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.06 E-value=0.68 Score=34.63 Aligned_cols=48 Identities=23% Similarity=0.387 Sum_probs=33.6
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHS 417 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~ 417 (425)
....|.-|...+..+ ..- .|++.||.+|-.-.-..-..||-|......
T Consensus 14 ~~~~C~IC~~~~~~~-------~~~-~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 14 TVPECAICLQTCVHP-------VSL-PCKHVFCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SCCBCSSSSSBCSSE-------EEE-TTTEEEEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCccCCcccCCC-------EEc-cCCCHHHHHHHHHHHHCCCcCcCcCchhCH
Confidence 456899998776432 223 499999999976443444799999875543
No 97
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.80 E-value=1.8 Score=31.71 Aligned_cols=50 Identities=22% Similarity=0.519 Sum_probs=35.2
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhh-ccCCCCCCCCCCCCCCc
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH-ESLHNCPGCESLRHSNP 419 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiH-e~lh~CPgC~~~~~~~~ 419 (425)
....|.-|...+.++. . ..|++.||.+|=.-.- ..-..||-|........
T Consensus 14 ~~~~C~IC~~~~~~p~-------~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 64 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPK-------Q-TECGHRFCESCMAALLSSSSPKCTACQESIVKDK 64 (66)
T ss_dssp CCEECTTTCCEESSCC-------C-CSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTT
T ss_pred cCCCCCCCChHhcCee-------E-CCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhh
Confidence 3557999997775431 1 4799999999965443 45568999987655443
No 98
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=79.77 E-value=0.83 Score=33.14 Aligned_cols=24 Identities=29% Similarity=0.721 Sum_probs=20.0
Q ss_pred eEEcCCCCcccc-----------------CCCC--CCCCCCce
Q 014393 304 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C-----------------~lP~--~C~~C~l~ 327 (425)
-|+|++|+-+|= +||. .||+||..
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAP 44 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCCC
Confidence 489999999886 5887 89999963
No 99
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=79.68 E-value=2 Score=35.42 Aligned_cols=50 Identities=22% Similarity=0.440 Sum_probs=34.1
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCCCccc
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIV 421 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~~ 421 (425)
...|.-|...|..+ ..-..|++.||..|=.-.-+ ..||-|........+.
T Consensus 22 ~~~C~IC~~~~~~p-------v~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~~~ 71 (117)
T 1jm7_B 22 LLRCSRCTNILREP-------VCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDLK 71 (117)
T ss_dssp TTSCSSSCSCCSSC-------BCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSCC
T ss_pred CCCCCCCChHhhCc-------cEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCcccccc
Confidence 34799998777543 22337999999999643333 6899998765544443
No 100
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=79.67 E-value=1.5 Score=34.09 Aligned_cols=39 Identities=21% Similarity=0.538 Sum_probs=28.7
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 410 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPg 410 (425)
....|+.|.+.+.- ..|.| .|+..||.. --|-.-|+|++
T Consensus 24 ~~~RC~~C~kkvgL------~~f~C-rCg~~FCs~---HRy~e~H~C~f 62 (74)
T 1wfp_A 24 TATRCLSCNKKVGV------TGFKC-RCGSTFCGT---HRYPESHECQF 62 (74)
T ss_dssp CCCBCSSSCCBCTT------TCEEC-TTSCEECTT---TCSTTTSCCCS
T ss_pred cCccchhhcCcccc------cceEe-ccCCEeccc---cCCCcCCCCcC
Confidence 45689999877642 25999 899999975 33456788875
No 101
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=79.34 E-value=0.61 Score=39.80 Aligned_cols=44 Identities=23% Similarity=0.523 Sum_probs=32.0
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 415 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~ 415 (425)
..|.-|...|.++ ... .|++.||.+|=.-.-+.-..||.|-...
T Consensus 54 ~~C~iC~~~~~~~-------~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 54 LQCIICSEYFIEA-------VTL-NCAHSFCSYCINEWMKRKIECPICRKDI 97 (138)
T ss_dssp SBCTTTCSBCSSE-------EEE-TTSCEEEHHHHHHHTTTCSBCTTTCCBC
T ss_pred CCCcccCcccCCc-------eEC-CCCCCccHHHHHHHHHcCCcCCCCCCcC
Confidence 3699999777542 222 5999999999655555668899997644
No 102
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=78.97 E-value=0.49 Score=39.04 Aligned_cols=45 Identities=29% Similarity=0.696 Sum_probs=34.9
Q ss_pred ccccccccccCCCCCCCcceeCCCCCcccccccchhhh-ccCCCCCCCCCCCC
Q 014393 365 TCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH-ESLHNCPGCESLRH 416 (425)
Q Consensus 365 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiH-e~lh~CPgC~~~~~ 416 (425)
.|--|..++. .+.+---|+.+||.||-...- +.-..||+|.....
T Consensus 3 fC~~C~~Pi~-------iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 3 FCDKCGLPIK-------VYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQ 48 (101)
T ss_dssp BCTTTCSBCS-------EEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCS
T ss_pred ecCccCCCeE-------EEeeeccccccHHHHHHHHHHhccCCCCcCcCCeee
Confidence 5888887774 245788899999999987654 56789999986544
No 103
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=78.46 E-value=1.2 Score=35.11 Aligned_cols=49 Identities=18% Similarity=0.421 Sum_probs=34.6
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 415 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~ 415 (425)
....|.-|+..|.... ....-| |++.||.+|-.-.-..-..||-|-...
T Consensus 39 ~~~~C~IC~~~~~~~~----~~~~l~-C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~ 87 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGD----VATELP-CHHYFHKPCVSIWLQKSGTCPVCRCMF 87 (91)
T ss_dssp SCSEETTTTEECCTTC----EEEEET-TTEEEEHHHHHHHHTTTCBCTTTCCBS
T ss_pred CCCCCcccChhhcCCC----cEEecC-CCChHHHHHHHHHHHcCCcCcCcCccC
Confidence 4568999997775321 122344 999999999765556667999997644
No 104
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.41 E-value=2 Score=31.87 Aligned_cols=50 Identities=30% Similarity=0.652 Sum_probs=34.5
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhc---cCCCCCCCCCCCCCCc
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE---SLHNCPGCESLRHSNP 419 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe---~lh~CPgC~~~~~~~~ 419 (425)
....|.-|...+..+ ..- .|++.||.+|-.-.-+ .-..||-|........
T Consensus 19 ~~~~C~IC~~~~~~~-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 71 (73)
T 2ysl_A 19 EEVICPICLDILQKP-------VTI-DCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNA 71 (73)
T ss_dssp CCCBCTTTCSBCSSE-------EEC-TTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCC
T ss_pred cCCEeccCCcccCCe-------EEc-CCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCccc
Confidence 456899999777532 222 7999999999654433 3458999987655443
No 105
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=78.28 E-value=1 Score=32.97 Aligned_cols=24 Identities=33% Similarity=0.872 Sum_probs=19.8
Q ss_pred eEEcCCCCcccc-----------------CCCC--CCCCCCce
Q 014393 304 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C-----------------~lP~--~C~~C~l~ 327 (425)
-|+|++|+-+|= +||- .||+||..
T Consensus 3 ~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 3 KYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVG 45 (54)
T ss_dssp CEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred ceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCc
Confidence 599999998876 5776 89999964
No 106
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=77.98 E-value=1.3 Score=32.03 Aligned_cols=24 Identities=33% Similarity=0.861 Sum_probs=19.6
Q ss_pred eEEcCCCCcccc-----------------CCCC--CCCCCCce
Q 014393 304 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C-----------------~lP~--~C~~C~l~ 327 (425)
-|+|+.|+-+|= +||. .||+||..
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 45 (52)
T 1e8j_A 3 IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGAS 45 (52)
T ss_dssp CEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCCC
T ss_pred cEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCCc
Confidence 599999999886 3777 89999863
No 107
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=77.26 E-value=1.9 Score=32.60 Aligned_cols=39 Identities=21% Similarity=0.483 Sum_probs=28.4
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 410 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPg 410 (425)
....|..|.+.+.- ..|.| +|++.||..= -|-.-|+|++
T Consensus 14 ~~~rC~~C~kkvgl------~~f~C-rCg~~FC~~H---Ry~e~H~C~f 52 (64)
T 1wfh_A 14 RPNRCTVCRKRVGL------TGFMC-RCGTTFCGSH---RYPEVHGCTF 52 (64)
T ss_dssp SCCCCTTTCCCCCT------TCEEC-SSSCEECTTT---CSTTTTTCCC
T ss_pred cCCcChhhCCccCc------cCEEe-ecCCEecccc---CCcccCCCCc
Confidence 45689999876532 15999 7999999763 2456788875
No 108
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=77.18 E-value=2.7 Score=32.56 Aligned_cols=52 Identities=21% Similarity=0.443 Sum_probs=34.7
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhh-ccCCCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH-ESLHNCPGCESLRHS 417 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiH-e~lh~CPgC~~~~~~ 417 (425)
....|.-|.-++...+ ...+.| .|++.||..|-.-+- +.-..||.|-.....
T Consensus 10 ~~~~CpICle~~~~~d---~~~~p~-~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDD---INFFPC-TCGYQICRFCWHRIRTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCBCTTTCCBCCTTT---TTCCSS-TTSCCCCHHHHHHHTTSSCSBCTTTCCBCSS
T ss_pred cCCcCCccCccCcccc---cccccc-CCCCCcCHHHHHHHHhcCCCCCCCCCCccCC
Confidence 4568999997774221 122345 699999999965543 335689999865443
No 109
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=77.11 E-value=1.2 Score=34.38 Aligned_cols=24 Identities=25% Similarity=0.523 Sum_probs=20.8
Q ss_pred eEEcCCCCccccC-----------------CCC--CCCCCCce
Q 014393 304 GYTCPRCKARVCE-----------------LPT--DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C~-----------------lP~--~C~~C~l~ 327 (425)
-|+|++|+-+|=. ||. .||+||..
T Consensus 7 ~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 7 KYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp CEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred eEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCC
Confidence 6999999999873 887 89999974
No 110
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=76.43 E-value=1.3 Score=35.05 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=25.6
Q ss_pred ccccccccccCCC--------CCCCcceeCCCCCcccccccchhhhccC
Q 014393 365 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHESL 405 (425)
Q Consensus 365 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCD~fiHe~l 405 (425)
.|.-|.+.|.... -.....|.|+.|+..|=..-++-.|...
T Consensus 39 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~ 87 (110)
T 2csh_A 39 GCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS 87 (110)
T ss_dssp ECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHH
Confidence 4666666665431 0112358899999988777777776543
No 111
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=76.15 E-value=1.1 Score=35.90 Aligned_cols=24 Identities=25% Similarity=0.661 Sum_probs=20.6
Q ss_pred eEEcCCCCcccc-----------------CCCC--CCCCCCce
Q 014393 304 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C-----------------~lP~--~C~~C~l~ 327 (425)
-|+|++|+-+|= +||. .||+||..
T Consensus 35 ~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 77 (87)
T 1s24_A 35 KWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGAT 77 (87)
T ss_dssp EEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCC
T ss_pred eEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCCC
Confidence 799999998886 6887 89999963
No 112
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.04 E-value=2.4 Score=29.79 Aligned_cols=42 Identities=26% Similarity=0.574 Sum_probs=29.5
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhh-h--ccCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI-H--ESLHNCPGC 411 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fi-H--e~lh~CPgC 411 (425)
....|.-|...+.++. . ..|++.||.+|=.-. . ..-..||-|
T Consensus 14 ~~~~C~IC~~~~~~p~-------~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPV-------I-IECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCC-------C-CSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccE-------e-CCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3568999998775431 1 369999999996543 2 355689987
No 113
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.97 E-value=1.6 Score=31.86 Aligned_cols=53 Identities=19% Similarity=0.449 Sum_probs=36.6
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 415 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~ 415 (425)
....|.-|...+..+.. ....+.-..|++.||.+|-.-.-+.-..||-|-...
T Consensus 14 ~~~~C~IC~~~~~~~~~-~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 66 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQ-NGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKI 66 (69)
T ss_dssp CCCCCTTTCCCHHHHTT-TTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCC
T ss_pred CCCCCcccCcccccccc-ccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCcc
Confidence 45689999987754311 111235568999999999765555567999997543
No 114
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=75.93 E-value=1.2 Score=40.98 Aligned_cols=24 Identities=25% Similarity=0.270 Sum_probs=19.8
Q ss_pred eEEcCCCCccccC-CCCCCCCCCce
Q 014393 304 GYTCPRCKARVCE-LPTDCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C~-lP~~C~~C~l~ 327 (425)
-|+|++|+-++=- .|-.||+||-.
T Consensus 171 ~~~C~~CG~i~~g~~p~~CP~C~~~ 195 (202)
T 1yuz_A 171 FHLCPICGYIHKGEDFEKCPICFRP 195 (202)
T ss_dssp EEECSSSCCEEESSCCSBCTTTCCB
T ss_pred EEEECCCCCEEcCcCCCCCCCCCCC
Confidence 7999999998764 45599999964
No 115
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.57 E-value=2.2 Score=30.81 Aligned_cols=42 Identities=33% Similarity=0.748 Sum_probs=29.8
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhc---cCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE---SLHNCPGC 411 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe---~lh~CPgC 411 (425)
....|.-|...|.++ ..- .|++.||.+|=.-.-+ .-..||-|
T Consensus 19 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKP-------VTI-DCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSC-------EEC-TTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhCCe-------EEe-CCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 356899999777543 222 7999999999654433 45589987
No 116
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=75.42 E-value=0.97 Score=32.52 Aligned_cols=57 Identities=18% Similarity=0.408 Sum_probs=38.0
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCCCcc
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 420 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~ 420 (425)
...|.-|...+..+.. ......-..|++.||.+|-.-.-+.-..||-|........+
T Consensus 3 ~~~C~IC~~~~~~~~~-~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 59 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQ-NGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 59 (64)
T ss_dssp CCBCTTTCCBHHHHHH-TTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTCE
T ss_pred CCCCCccChhhhCccc-cCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccce
Confidence 4479999877754210 01123466899999999986555556799999876554443
No 117
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=75.34 E-value=1.5 Score=36.86 Aligned_cols=24 Identities=25% Similarity=0.474 Sum_probs=13.8
Q ss_pred ceeCCC--CCcccccccchhhhccCC
Q 014393 383 YVACPK--CKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~--C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+. |+..|=..=++-.|...|
T Consensus 120 ~~~C~~~~C~k~f~~~~~L~~H~~~H 145 (155)
T 2rpc_A 120 PFKCEFEGCDRRFANSSDRKKHMHVH 145 (155)
T ss_dssp SBCCSSTTCCCCBSSHHHHHHSSTTT
T ss_pred CccCCCCCCCCccCCHHHHHHHHHHh
Confidence 366664 666665555555555554
No 118
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.88 E-value=2.1 Score=32.65 Aligned_cols=47 Identities=26% Similarity=0.603 Sum_probs=34.8
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
....|.-|...|..+ .. ..|++.||.+|=.-.-+.-..||-|.....
T Consensus 14 ~~~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNP-------VV-TKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSE-------EE-CTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCe-------eE-ccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 355899998777532 22 479999999997655566778999987554
No 119
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=74.32 E-value=1.6 Score=36.32 Aligned_cols=46 Identities=20% Similarity=0.609 Sum_probs=32.2
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccc-hhhhccCCCCCCCCCCCCC
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECD-IYIHESLHNCPGCESLRHS 417 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD-~fiHe~lh~CPgC~~~~~~ 417 (425)
..|.-|...|..+ .. -.|++.||.+|= .++...-..||-|-.....
T Consensus 53 ~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 53 FQCICCQELVFRP-------IT-TVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp TBCTTTSSBCSSE-------EE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCcCChHHcCc-------EE-eeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 4699999777543 11 279999999995 3444455699999865443
No 120
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=74.04 E-value=0.94 Score=33.79 Aligned_cols=27 Identities=41% Similarity=0.920 Sum_probs=19.2
Q ss_pred cee-eecCCc-cccCeEEcCCCCccccCCC
Q 014393 291 SIC-SCHKEV-KVGVGYTCPRCKARVCELP 318 (425)
Q Consensus 291 a~C-~CH~~~-~~~~Gy~Cp~C~s~~C~lP 318 (425)
.+| .|+... ... -|.||+|+.+||+|+
T Consensus 12 ~~C~vC~~~~~~~a-kY~CPrC~~rYCSl~ 40 (59)
T 1x4s_A 12 GPCGFCPAGEVQPA-RYTCPRCNAPYCSLR 40 (59)
T ss_dssp EEECSSCTTCCEEE-CEECTTTCCEESSHH
T ss_pred CcCcCCCCCcCCCc-cccCcCCCCCccChH
Confidence 355 566522 233 799999999999874
No 121
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=73.97 E-value=1.4 Score=35.54 Aligned_cols=33 Identities=30% Similarity=0.583 Sum_probs=20.6
Q ss_pred eEEcC--CCCcccc-------------CCCCCCCCCCceecCchhHHh
Q 014393 304 GYTCP--RCKARVC-------------ELPTDCRICGLQLVSSPHLAR 336 (425)
Q Consensus 304 Gy~Cp--~C~s~~C-------------~lP~~C~~C~l~Lvs~phLar 336 (425)
.|.|| .|+..|- +-|-.|+.|+..+.+...|.+
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~ 52 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKR 52 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHH
T ss_pred cccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHH
Confidence 57777 6666543 234467777777777666655
No 122
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=73.97 E-value=1.4 Score=44.07 Aligned_cols=43 Identities=21% Similarity=0.324 Sum_probs=31.0
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGC 411 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC 411 (425)
..+.|..|...|..-. ..+|.|..|+..+|..|-..+. +|++=
T Consensus 356 ~~t~C~~C~~~~~g~~---~qg~~C~~C~~~~h~~C~~~~~----~C~~~ 398 (406)
T 2vrw_B 356 ETTSCKACQMLLRGTF---YQGYRCYRCRAPAHKECLGRVP----PCGRH 398 (406)
T ss_dssp SCCBCTTTCCBCCSSS---SCEEEETTTCCEECGGGGGGSC----CC---
T ss_pred CCCCCccccchhceeC---CCCCCCCCCcCccchhhhhhCC----CCCCC
Confidence 3568999998885322 2479999999999999987665 37654
No 123
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=73.11 E-value=6.1 Score=32.82 Aligned_cols=31 Identities=19% Similarity=0.392 Sum_probs=18.9
Q ss_pred CCcccccc--------ccccCCCCCCCcceeCCCCCccc
Q 014393 363 RSTCFGCQ--------QSLLSSGNKPGLYVACPKCKKHF 393 (425)
Q Consensus 363 ~~~C~~C~--------~~~~~~~~~~~~~~~C~~C~~~f 393 (425)
...|..|. .+.-+.+......|.|.+|++.+
T Consensus 72 ~~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w 110 (113)
T 3h0g_I 72 DKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAF 110 (113)
T ss_dssp CSCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCC
T ss_pred ccCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEE
Confidence 35788884 22222233445679999998754
No 124
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=72.96 E-value=3.3 Score=34.52 Aligned_cols=76 Identities=20% Similarity=0.297 Sum_probs=43.9
Q ss_pred eEEcCCCCccccCCCCCCCCCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCC---
Q 014393 304 GYTCPRCKARVCELPTDCRICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSG--- 377 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP~~C~~C~l~Lvs~phLarsyh-hlfp~~~f~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~--- 377 (425)
-|.|+.|. |+.|+..+.+...|.+-.- |- .. ..-.|. .|.+.|....
T Consensus 34 ~~~C~~c~---------C~~c~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~~~C~~~f~~~~~l~ 86 (155)
T 2gli_A 34 EFVCHWGG---------CSRELRPFKAQYMLVVHMRRHT-GE-----------------KPHKCTFEGCRKSYSRLENLK 86 (155)
T ss_dssp CCCCCBTT---------CTTTTCCCSSHHHHHHHTHHHH-CC-----------------CCCCCCSTTCCCCCSSHHHHH
T ss_pred ceeCCCCC---------ccchhhhhhhHHHHHHHHHhcC-CC-----------------CCccCCCCCCCCcccCHHHHH
Confidence 57777663 6667777777666655321 11 00 122465 4777765431
Q ss_pred -----CCCCcceeCCC--CCcccccccchhhhc-cCC
Q 014393 378 -----NKPGLYVACPK--CKKHFCLECDIYIHE-SLH 406 (425)
Q Consensus 378 -----~~~~~~~~C~~--C~~~fC~dCD~fiHe-~lh 406 (425)
-.....|.|+. |+..|=..=++-.|. ..|
T Consensus 87 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H 123 (155)
T 2gli_A 87 THLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123 (155)
T ss_dssp HHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred HHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc
Confidence 01223578886 888887777777775 454
No 125
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=72.49 E-value=2 Score=33.65 Aligned_cols=34 Identities=29% Similarity=0.578 Sum_probs=29.3
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|+|++|+..|- +-|-.|+.|+..+.....|.|-
T Consensus 28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H 75 (85)
T 2lv2_A 28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRH 75 (85)
T ss_dssp TEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHH
T ss_pred CEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHh
Confidence 699999999776 3567899999999999999875
No 126
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=72.35 E-value=1.2 Score=39.06 Aligned_cols=45 Identities=27% Similarity=0.575 Sum_probs=32.7
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccchhhhcc-CCCCCCCCCCC
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLR 415 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~-lh~CPgC~~~~ 415 (425)
..|.-|...|.. ...+..|++.||.+|=.-.-.. -..||-|-...
T Consensus 55 ~~C~IC~~~~~~-------p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 55 LMCPICLDMLKN-------TMTTKECLHRFCADCIITALRSGNKECPTCRKKL 100 (165)
T ss_dssp HBCTTTSSBCSS-------EEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBC
T ss_pred CCCcccChHhhC-------cCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcC
Confidence 379999877753 2456789999999996443333 56799998654
No 127
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.32 E-value=1.1 Score=33.08 Aligned_cols=23 Identities=30% Similarity=1.015 Sum_probs=17.8
Q ss_pred eee-ecCCccccCeEEcCCCCccccCCC
Q 014393 292 ICS-CHKEVKVGVGYTCPRCKARVCELP 318 (425)
Q Consensus 292 ~C~-CH~~~~~~~Gy~Cp~C~s~~C~lP 318 (425)
+|. |+. .. -|.||+|+.+||+++
T Consensus 14 ~C~vC~~---~~-kY~CPrC~~~yCSl~ 37 (56)
T 2yqq_A 14 VCVICLE---KP-KYRCPACRVPYCSVV 37 (56)
T ss_dssp CCTTTCS---CC-SEECTTTCCEESSHH
T ss_pred ccCcCcC---CC-eeeCCCCCCCeeCHH
Confidence 454 665 33 799999999999874
No 128
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=72.12 E-value=2.2 Score=31.19 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=28.4
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|++|+-.|- +-|-.|+.||..+....+|.+-
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H 51 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRH 51 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHH
T ss_pred CccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHH
Confidence 589999998776 4577999999999999988763
No 129
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=72.00 E-value=1.9 Score=29.64 Aligned_cols=33 Identities=21% Similarity=0.456 Sum_probs=26.0
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLAR 336 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLar 336 (425)
.|.|+.|+..|- +-|-.|+.|+..+.....|.+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 50 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRY 50 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHH
Confidence 588999988765 456789999999998888865
No 130
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=71.64 E-value=1.5 Score=35.88 Aligned_cols=44 Identities=23% Similarity=0.515 Sum_probs=30.7
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccch-hhhccCCCCCCCCCCC
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHESLHNCPGCESLR 415 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~-fiHe~lh~CPgC~~~~ 415 (425)
..|.-|...|..+ .. -.|++.||.+|=. ++...-..||.|-...
T Consensus 16 ~~C~iC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 16 CQCGICMEILVEP-------VT-LPCNHTLCKPCFQSTVEKASLCCPFCRRRV 60 (115)
T ss_dssp HBCTTTCSBCSSC-------EE-CTTSCEECHHHHCCCCCTTTSBCTTTCCBC
T ss_pred CCCccCCcccCce-------eE-cCCCCHHhHHHHHHHHhHCcCCCCCCCccc
Confidence 4799999777543 11 2699999999943 3333357899997644
No 131
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=71.47 E-value=1.2 Score=36.75 Aligned_cols=48 Identities=29% Similarity=0.583 Sum_probs=33.2
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchh-hhccCCCCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-IHESLHNCPGCESLRHSN 418 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f-iHe~lh~CPgC~~~~~~~ 418 (425)
...|.-|...+..+ ... .|++.||.+|=.- +...-..||-|.......
T Consensus 18 ~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 18 KYECPICLMALREA-------VQT-PCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp GGBCTTTCSBCSSE-------EEC-TTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCcCChhhcCe-------EEC-CcCChhhHHHHHHHHhhCCCCCCCCCCCcCHH
Confidence 45899999777532 334 5999999999643 333334999998755543
No 132
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=71.31 E-value=2.7 Score=35.52 Aligned_cols=31 Identities=19% Similarity=0.493 Sum_probs=18.8
Q ss_pred CCccccccc--------cccCCCCCCCcceeCCCCCccc
Q 014393 363 RSTCFGCQQ--------SLLSSGNKPGLYVACPKCKKHF 393 (425)
Q Consensus 363 ~~~C~~C~~--------~~~~~~~~~~~~~~C~~C~~~f 393 (425)
...|..|.. +.-+.+......|.|.+|++.+
T Consensus 72 ~~~Cp~C~~~~a~~~q~q~rsade~~t~fy~C~~C~~~w 110 (122)
T 1twf_I 72 DRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIF 110 (122)
T ss_dssp CCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCEE
T ss_pred CCCCCCCCCCEEEEEEecCccCCCCceEEEEeCCCCCEe
Confidence 457998942 2222223345578999998754
No 133
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=71.18 E-value=0.84 Score=45.95 Aligned_cols=49 Identities=20% Similarity=0.447 Sum_probs=0.0
Q ss_pred CCCCccccccccccCCCCCCCcceeCCCCCcccccccchh-------hhccCCCCCCCCC
Q 014393 361 RSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-------IHESLHNCPGCES 413 (425)
Q Consensus 361 ~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f-------iHe~lh~CPgC~~ 413 (425)
.....|..|..+|.-- ..++.|..|+.+||..|.-+ .+.....|-.|-.
T Consensus 373 ~~~~~c~~c~~~f~~~----~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~ 428 (434)
T 3mpx_A 373 THVMMCMNCGCDFSLT----LRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFG 428 (434)
T ss_dssp ------------------------------------------------------------
T ss_pred ccCCcCCCcCCCCCCc----chhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHH
Confidence 3456899999998532 23588999999999999853 2334677888865
No 134
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=70.15 E-value=3.4 Score=35.94 Aligned_cols=93 Identities=24% Similarity=0.598 Sum_probs=60.2
Q ss_pred eEEc--CCCCcccc--------------CCCCCCC--CCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCC
Q 014393 304 GYTC--PRCKARVC--------------ELPTDCR--ICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSR 363 (425)
Q Consensus 304 Gy~C--p~C~s~~C--------------~lP~~C~--~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~ 363 (425)
-|.| +.|...|- +-|-.|+ .|+..+.+...|.+-. +|.-.. ..
T Consensus 42 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~-----------------~~ 104 (190)
T 1tf6_A 42 PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI-----------------CV 104 (190)
T ss_dssp SSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTT-----------------SC
T ss_pred CccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCc-----------------ce
Confidence 5777 67776553 2345677 7888888888777653 232111 12
Q ss_pred Ccc--ccccccccCCC--------CCCCcceeCCC--CCcccccccchhhhccCCC---CCC---CCC
Q 014393 364 STC--FGCQQSLLSSG--------NKPGLYVACPK--CKKHFCLECDIYIHESLHN---CPG---CES 413 (425)
Q Consensus 364 ~~C--~~C~~~~~~~~--------~~~~~~~~C~~--C~~~fC~dCD~fiHe~lh~---CPg---C~~ 413 (425)
-.| ..|.+.|.... -.....|.|+. |+..|=..-++..|...|. |+. |..
T Consensus 105 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~~~~C~~ 172 (190)
T 1tf6_A 105 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSF 172 (190)
T ss_dssp CEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCSTTTCCC
T ss_pred eeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCCCCcCCC
Confidence 358 77888876431 01223589977 9999988888888887764 676 653
No 135
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=70.12 E-value=2.7 Score=34.08 Aligned_cols=51 Identities=24% Similarity=0.565 Sum_probs=33.2
Q ss_pred CCccccccccccCCCC----------CCCcceeCCCCCcccccccchhhh-----ccCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGN----------KPGLYVACPKCKKHFCLECDIYIH-----ESLHNCPGCES 413 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~----------~~~~~~~C~~C~~~fC~dCD~fiH-----e~lh~CPgC~~ 413 (425)
...|.-|+..|..+.. .....-.-..|++.||.+|=.-.- +.-..||-|-.
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~ 90 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 90 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCC
Confidence 4589999988854320 001122356899999999954322 34569999975
No 136
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=69.07 E-value=3.8 Score=35.65 Aligned_cols=91 Identities=30% Similarity=0.560 Sum_probs=64.1
Q ss_pred eEEc--CCCCcccc--------------CCCCCC--CCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCC
Q 014393 304 GYTC--PRCKARVC--------------ELPTDC--RICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSR 363 (425)
Q Consensus 304 Gy~C--p~C~s~~C--------------~lP~~C--~~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~ 363 (425)
-|.| +.|+..|- +-|-.| +.|+..+.+...|.+-. |+- . ..
T Consensus 12 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~ 72 (190)
T 1tf6_A 12 RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG--E-----------------KN 72 (190)
T ss_dssp CCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT--C-----------------CC
T ss_pred ceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccC--C-----------------Cc
Confidence 6888 68887665 356789 88999999998887642 221 0 12
Q ss_pred Cccc--cccccccCCC----------CCCCcceeC--CCCCcccccccchhhhccCC------CCCC--CCC
Q 014393 364 STCF--GCQQSLLSSG----------NKPGLYVAC--PKCKKHFCLECDIYIHESLH------NCPG--CES 413 (425)
Q Consensus 364 ~~C~--~C~~~~~~~~----------~~~~~~~~C--~~C~~~fC~dCD~fiHe~lh------~CPg--C~~ 413 (425)
-.|. .|.+.|.... ......|.| +.|+..|=..=++-.|...| .||. |..
T Consensus 73 ~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k 144 (190)
T 1tf6_A 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDK 144 (190)
T ss_dssp EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCC
T ss_pred eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCc
Confidence 3588 8988886431 112346999 89999999888888886654 6966 874
No 137
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=68.81 E-value=0.8 Score=34.65 Aligned_cols=69 Identities=22% Similarity=0.377 Sum_probs=42.9
Q ss_pred CCC--CCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCcceeCCC
Q 014393 320 DCR--ICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVACPK 388 (425)
Q Consensus 320 ~C~--~C~l~Lvs~phLarsyh-hlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~C~~ 388 (425)
.|+ .|+..+.+...|.+-.- |. .. ..-.|.-|...|..... .....|.|+.
T Consensus 6 ~C~~~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 67 (90)
T 1a1h_A 6 ACPVESCDRRFSQSGSLTRHIRIHT-GQ-----------------KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67 (90)
T ss_dssp ECCSSSCCCEESSHHHHHHHHHHHH-CC-----------------CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT
T ss_pred ECCCCCCCCccCCHHHHHHHHHHhC-CC-----------------CCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCC
Confidence 454 47888887777765321 21 00 12357778777754310 0123599999
Q ss_pred CCcccccccchhhhccCC
Q 014393 389 CKKHFCLECDIYIHESLH 406 (425)
Q Consensus 389 C~~~fC~dCD~fiHe~lh 406 (425)
|+..|=..-++-.|...|
T Consensus 68 C~~~f~~~~~l~~H~~~H 85 (90)
T 1a1h_A 68 CGRKFARSDERKRHTKIH 85 (90)
T ss_dssp TCCEESSHHHHHHHHGGG
T ss_pred CCchhCCHHHHHHHHHHh
Confidence 999998887877777665
No 138
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=67.86 E-value=0.59 Score=39.63 Aligned_cols=72 Identities=18% Similarity=0.216 Sum_probs=50.1
Q ss_pred CCCCCCCCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCcceeCC
Q 014393 317 LPTDCRICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVACP 387 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLarsyh-hlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~C~ 387 (425)
-|=.|+.||..+.+...|.+-.- |. ... .-.|--|.+.|..... .....|.|+
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~~H~-~~k-----------------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 82 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFNIHS-WEK-----------------KYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCL 82 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHHHHH-CCS-----------------CEECSSSSCEESSHHHHHHHHHHHHTCCCEEES
T ss_pred cCeECCCCCCCcCCHHHHHHHHHHcC-CCC-----------------CeeCCccCeecccccchhhhccccCCCccccCC
Confidence 34579999999999999876422 21 111 2358899988865420 012359999
Q ss_pred CCCcccccccchhhhccCC
Q 014393 388 KCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 388 ~C~~~fC~dCD~fiHe~lh 406 (425)
.|+..|-..-++-.|...|
T Consensus 83 ~C~k~F~~~~~L~~H~~~h 101 (133)
T 2lt7_A 83 ACGKSFINYQFMSSHIKSV 101 (133)
T ss_dssp SSCCEESSHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHhHHh
Confidence 9999999998888886443
No 139
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.71 E-value=4.8 Score=30.71 Aligned_cols=51 Identities=20% Similarity=0.333 Sum_probs=33.5
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhcc---CCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES---LHNCPGCESLRH 416 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~---lh~CPgC~~~~~ 416 (425)
....|.-|...|.... ..... -.|++.||.+|=.-.-+. -..||.|.....
T Consensus 14 ~~~~C~IC~~~~~~~~---~~~~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 14 EVLECPICMESFTEEQ---LRPKL-LHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp SCCBCTTTCCBCCTTS---SCEEE-CSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred CCCCCccCCccccccC---CCeEE-CCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 3568999998875421 11122 369999999996544333 378999986433
No 140
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=66.50 E-value=2.3 Score=37.36 Aligned_cols=26 Identities=31% Similarity=0.775 Sum_probs=22.2
Q ss_pred eEEcCCCCccccCCCC--CCCCCCceec
Q 014393 304 GYTCPRCKARVCELPT--DCRICGLQLV 329 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP~--~C~~C~l~Lv 329 (425)
-|.|+-|+.+|=..++ .||.||..+.
T Consensus 132 ~y~C~~Cg~~~~~~~~~~~Cp~CG~~~~ 159 (165)
T 2lcq_A 132 RYVCIGCGRKFSTLPPGGVCPDCGSKVK 159 (165)
T ss_dssp CEEESSSCCEESSCCGGGBCTTTCCBEE
T ss_pred EEECCCCCCcccCCCCCCcCCCCCCcce
Confidence 7999999999976665 8999998753
No 141
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=66.35 E-value=7.3 Score=30.17 Aligned_cols=34 Identities=26% Similarity=0.586 Sum_probs=26.9
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+.|...|= +-|-.|+.|+..+....+|.+-
T Consensus 17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 64 (106)
T 2ee8_A 17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64 (106)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHH
Confidence 688888887664 3567899999999888888764
No 142
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.74 E-value=3.4 Score=31.21 Aligned_cols=42 Identities=21% Similarity=0.537 Sum_probs=30.3
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcc-cccccchhhhccCCCCCCCCCCCCC
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRHS 417 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCD~fiHe~lh~CPgC~~~~~~ 417 (425)
..|.-|...+.++ + --.|++. ||.+|- +.+..||.|......
T Consensus 26 ~~C~IC~~~~~~~------~--~~pCgH~~~C~~C~----~~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 26 KLCKICMDRNIAI------V--FVPCGHLVTCKQCA----EAVDKCPMCYTVITF 68 (75)
T ss_dssp HSCSSSCSSCCCB------C--CSSSCCCCBCHHHH----HHCSBCTTTCCBCCC
T ss_pred CCCCcCCCCCCCE------E--EecCCCHHHHHHHh----hCCCCCccCCceecC
Confidence 3699998665432 1 2369999 999997 467999999875443
No 143
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.16 E-value=5.1 Score=30.78 Aligned_cols=54 Identities=19% Similarity=0.376 Sum_probs=35.4
Q ss_pred CCCccccccccccCCC-------CCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSG-------NKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 415 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~-------~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~ 415 (425)
....|.-|+..|...- ........-+.|++.|+.+|=.---+.-.+||-|-...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~ 74 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDW 74 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBC
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCc
Confidence 3557999988885420 01122345668999999999554334457999997643
No 144
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=65.14 E-value=4.1 Score=31.66 Aligned_cols=39 Identities=28% Similarity=0.613 Sum_probs=27.4
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 410 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPg 410 (425)
....|+.|.+.+.- ..|.|. |+..||..= -|-.-|.|++
T Consensus 24 ~~nRC~~CrKkvgL------~gf~Cr-Cg~~FCs~H---Ry~e~H~C~f 62 (74)
T 1wfl_A 24 KKNRCFMCRKKVGL------TGFDCR-CGNLFCGLH---RYSDKHNCPY 62 (74)
T ss_dssp CTTBCSSSCCBCGG------GCEECT-TSCEECSSS---CSTTTTTCCC
T ss_pred cCCcChhhCCcccc------cCeecC-CCCEechhc---CCCccCCCcc
Confidence 34589999876532 249999 999999753 2345677765
No 145
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=65.07 E-value=4 Score=29.63 Aligned_cols=55 Identities=18% Similarity=0.446 Sum_probs=35.3
Q ss_pred CCccccccc-cccCCCCCCCcceeCCCCCcccccccchhh-hccCCCCCCCCCCCCCCccc
Q 014393 363 RSTCFGCQQ-SLLSSGNKPGLYVACPKCKKHFCLECDIYI-HESLHNCPGCESLRHSNPIV 421 (425)
Q Consensus 363 ~~~C~~C~~-~~~~~~~~~~~~~~C~~C~~~fC~dCD~fi-He~lh~CPgC~~~~~~~~~~ 421 (425)
...|.-|.. .+..+. ....=..|++.||.+|-.-. .+.-..||-|........+.
T Consensus 3 ~~~C~IC~~~~~~~~~----~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~ 59 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPS----LKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFR 59 (65)
T ss_dssp TTCCSTTTTHHHHCSS----CCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCCE
T ss_pred CCcCCcCCCCccCCCc----cCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccce
Confidence 346999987 554331 11122479999999996543 34446799998766655543
No 146
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=65.01 E-value=4.7 Score=31.35 Aligned_cols=43 Identities=33% Similarity=0.641 Sum_probs=31.0
Q ss_pred CCcccc--ccccccCCCCCCCcceeCC-----CCCcccccccchhhhccCCCCC
Q 014393 363 RSTCFG--CQQSLLSSGNKPGLYVACP-----KCKKHFCLECDIYIHESLHNCP 409 (425)
Q Consensus 363 ~~~C~~--C~~~~~~~~~~~~~~~~C~-----~C~~~fC~dCD~fiHe~lh~CP 409 (425)
-..|-+ |+..+...+ ....-.|+ .|+..||..|-.--|+ ..|.
T Consensus 25 ~~~CP~p~C~~~v~~~~--~~~~v~C~~~~~~~C~~~FC~~C~~~wH~--~~C~ 74 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEP--DQRKVTCEGGNGLGCGFAFCRECKEAYHE--GECS 74 (80)
T ss_dssp SCCCCSSSCCCCCCCCS--CTTSBCTTSSSTTCCSCCEETTTTEECCS--SCSS
T ss_pred cEECCCCCCCcccEECC--CCCcCCCCCCCCCCCCCeeccccCccccC--Cccc
Confidence 557887 987764332 12235798 9999999999988888 5553
No 147
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=64.86 E-value=2.3 Score=31.88 Aligned_cols=69 Identities=25% Similarity=0.460 Sum_probs=41.2
Q ss_pred CCCC--CCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCCC--------CCCcceeC
Q 014393 320 DCRI--CGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSGN--------KPGLYVAC 386 (425)
Q Consensus 320 ~C~~--C~l~Lvs~phLarsyh-hlfp~~~f~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~--------~~~~~~~C 386 (425)
.|+. |+..+.+...|.+-.- |. .. ..-.|. .|.+.|..... .....|.|
T Consensus 7 ~C~~~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C 68 (89)
T 2wbs_A 7 TCDYAGCGKTYTKSSHLKAHLRTHT-GE-----------------KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68 (89)
T ss_dssp ECCSTTTCCEESSHHHHHHHHTTSC-SS-----------------CCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred eCCCCCCCCcCCCHHHHHHHHHhcC-CC-----------------CCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccC
Confidence 3555 7888888887765422 11 01 123574 68877754310 01235999
Q ss_pred CCCCcccccccchhhhccCC
Q 014393 387 PKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 387 ~~C~~~fC~dCD~fiHe~lh 406 (425)
+.|+..|=..=++-.|...|
T Consensus 69 ~~C~~~f~~~~~l~~H~~~H 88 (89)
T 2wbs_A 69 QKCDRAFSRSDHLALHMKRH 88 (89)
T ss_dssp SSSSCEESSHHHHHHHGGGG
T ss_pred CCCCcccCCHHHHHHHHHhh
Confidence 99999987766666665544
No 148
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=64.22 E-value=3.4 Score=28.26 Aligned_cols=33 Identities=24% Similarity=0.663 Sum_probs=22.4
Q ss_pred EEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 305 YTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 305 y~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
|.|+.|+..|- +-|-.|+.|+..+.....|.+-
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 48 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHH
T ss_pred CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHH
Confidence 56777766553 2455788888888887777653
No 149
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.88 E-value=4.2 Score=29.52 Aligned_cols=34 Identities=26% Similarity=0.582 Sum_probs=28.0
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+.|...|- +-|-.|+.|+..+.....|.+-
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H 61 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHH
Confidence 799999988664 3567899999999998888763
No 150
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=63.78 E-value=3 Score=27.26 Aligned_cols=25 Identities=28% Similarity=0.721 Sum_probs=21.1
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRSHT 36 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGGSS
T ss_pred ceECCCCCchhCCHHHHHHHHHHhC
Confidence 5899999999999888888877763
No 151
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=63.52 E-value=5.2 Score=30.71 Aligned_cols=28 Identities=21% Similarity=0.657 Sum_probs=21.9
Q ss_pred CcceeCCCCCcccccccchhhhccCCCCCCCCC
Q 014393 381 GLYVACPKCKKHFCLECDIYIHESLHNCPGCES 413 (425)
Q Consensus 381 ~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~ 413 (425)
...|.|+.|+..|=++ -.+.+ .||.|..
T Consensus 26 ~v~Y~C~~CG~~~e~~----~~d~i-rCp~CG~ 53 (70)
T 1twf_L 26 TLKYICAECSSKLSLS----RTDAV-RCKDCGH 53 (70)
T ss_dssp CCCEECSSSCCEECCC----TTSTT-CCSSSCC
T ss_pred eEEEECCCCCCcceeC----CCCCc-cCCCCCc
Confidence 3569999999999776 45555 5999987
No 152
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=67.24 E-value=1.5 Score=24.95 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=19.5
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|-..-++-.|...|
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~~H 25 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIRHH 25 (26)
Confidence 378999999998888888887665
No 153
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=62.95 E-value=3.6 Score=34.11 Aligned_cols=29 Identities=21% Similarity=0.625 Sum_probs=25.2
Q ss_pred eEEcCCCCcccc---CCCCCCCCCCceecCch
Q 014393 304 GYTCPRCKARVC---ELPTDCRICGLQLVSSP 332 (425)
Q Consensus 304 Gy~Cp~C~s~~C---~lP~~C~~C~l~Lvs~p 332 (425)
-|.|-.|+-.|+ ..|+.||.|+..-|..|
T Consensus 67 p~~C~~CG~~F~~~~~kPsrCP~CkSe~Ie~P 98 (105)
T 2gmg_A 67 PAQCRKCGFVFKAEINIPSRCPKCKSEWIEEP 98 (105)
T ss_dssp CCBBTTTCCBCCCCSSCCSSCSSSCCCCBCCC
T ss_pred CcChhhCcCeecccCCCCCCCcCCCCCccCCc
Confidence 688999999997 68899999999888766
No 154
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.90 E-value=3.8 Score=31.29 Aligned_cols=40 Identities=33% Similarity=0.649 Sum_probs=27.6
Q ss_pred CCCccccccccccCCCCCCCc--ceeCCCCCcccccccchhhhccCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGL--YVACPKCKKHFCLECDIYIHESLHNCPG 410 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~--~~~C~~C~~~fC~dCD~fiHe~lh~CPg 410 (425)
....|+.|.+.+.-. . .|.| .|+..||.. --|-.-|+|++
T Consensus 14 ~~~rC~~C~kk~gL~-----~~egf~C-rCg~~FC~~---HRy~e~H~C~f 55 (67)
T 1x4w_A 14 SRRRCFQCQTKLELV-----QQELGSC-RCGYVFCML---HRLPEQHDCTF 55 (67)
T ss_dssp CTTBCSSSCCBCCHH-----HHHHHCC-SSSCCCCTT---TCSTGGGTCSS
T ss_pred cCCcchhhCCeeccc-----ccCceEe-cCCCEehhc---cCCccccCCcc
Confidence 456899998665311 1 2899 999999974 33455777765
No 155
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=62.15 E-value=2.8 Score=23.69 Aligned_cols=24 Identities=21% Similarity=0.574 Sum_probs=20.0
Q ss_pred eeCCCCCcccccccchhhhccCCC
Q 014393 384 VACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 384 ~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
|.|+.|++.|-..-++-.|...|.
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~h~ 25 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRVHK 25 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred ccCCCCCCcCCCHHHHHHHHHHcC
Confidence 789999999988888888877663
No 156
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=62.08 E-value=5 Score=37.24 Aligned_cols=53 Identities=8% Similarity=-0.131 Sum_probs=34.8
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccch-hhhccCCCCCCCCCCCCCCccccC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHESLHNCPGCESLRHSNPIVAN 423 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~-fiHe~lh~CPgC~~~~~~~~~~~~ 423 (425)
.-.|.-|...|.++. ...|++.||..|=. ++.+.-..||.|........++.|
T Consensus 208 ~~~c~i~~~~~~dPv--------~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n 261 (281)
T 2c2l_A 208 YLCGKISFELMREPC--------ITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPN 261 (281)
T ss_dssp TTBCTTTCSBCSSEE--------ECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEEC
T ss_pred ccCCcCcCCHhcCCe--------ECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCccc
Confidence 457999987776541 34599999999943 333333459999876554444433
No 157
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=62.00 E-value=4.4 Score=31.10 Aligned_cols=23 Identities=26% Similarity=0.830 Sum_probs=19.7
Q ss_pred eEEcCCCCccccCC---CCCCCCCCc
Q 014393 304 GYTCPRCKARVCEL---PTDCRICGL 326 (425)
Q Consensus 304 Gy~Cp~C~s~~C~l---P~~C~~C~l 326 (425)
-|+|+.|+..|=.. ++.|+-||-
T Consensus 28 ~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 28 KYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred EEECCCCCCcceeCCCCCccCCCCCc
Confidence 79999999997654 468999997
No 158
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=61.94 E-value=2.4 Score=24.45 Aligned_cols=25 Identities=36% Similarity=0.700 Sum_probs=20.9
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLTLHILLHE 26 (29)
T ss_dssp CEECSSSSCEESCSHHHHHHHTGGG
T ss_pred CccCCCCCchhCCHHHHHHHHHHhc
Confidence 3899999999998888888877663
No 159
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=61.76 E-value=2.4 Score=24.39 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=21.4
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-.+-.|...|.
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~h~ 27 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLETHD 27 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHTTC
T ss_pred CccCCCCCcccCCHHHHHHHHHHhc
Confidence 4899999999998888888877764
No 160
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=61.54 E-value=1.5 Score=25.19 Aligned_cols=24 Identities=29% Similarity=0.616 Sum_probs=19.1
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|...-.+-.|...|
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h 25 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLKIH 25 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHHh
Confidence 378999999998888877776554
No 161
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=61.45 E-value=3.8 Score=28.37 Aligned_cols=34 Identities=24% Similarity=0.603 Sum_probs=24.8
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+.|...|- +-|-.|+.|+..+.+...|.+-
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 49 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHH
T ss_pred cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence 377887776554 2355788899988888888764
No 162
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=60.93 E-value=3 Score=33.00 Aligned_cols=33 Identities=21% Similarity=0.472 Sum_probs=23.9
Q ss_pred ecCCccccCe-EEcCCCCccccCCCCCCCCCCcee
Q 014393 295 CHKEVKVGVG-YTCPRCKARVCELPTDCRICGLQL 328 (425)
Q Consensus 295 CH~~~~~~~G-y~Cp~C~s~~C~lP~~C~~C~l~L 328 (425)
|+..+...++ |.|+.|.+-|=..+ .||-||..|
T Consensus 8 C~~~l~~~~~~~~C~~C~~~~~~~a-fCPeCgq~L 41 (81)
T 2jrp_A 8 CHHALERNGDTAHCETCAKDFSLQA-LCPDCRQPL 41 (81)
T ss_dssp SCSCCEECSSEEECTTTCCEEEEEE-ECSSSCSCC
T ss_pred CCCccccCCCceECccccccCCCcc-cCcchhhHH
Confidence 5665544334 45999999887777 899999764
No 163
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=60.91 E-value=4.3 Score=30.30 Aligned_cols=25 Identities=32% Similarity=0.701 Sum_probs=20.1
Q ss_pred EEcCCCCccccCCCCCCCCCCceecCc
Q 014393 305 YTCPRCKARVCELPTDCRICGLQLVSS 331 (425)
Q Consensus 305 y~Cp~C~s~~C~lP~~C~~C~l~Lvs~ 331 (425)
-.||+|+.. .|--.||.||....++
T Consensus 7 r~C~~CgvY--TLk~~CP~CG~~T~~~ 31 (60)
T 2apo_B 7 KKCPKCGLY--TLKEICPKCGEKTVIP 31 (60)
T ss_dssp EECTTTCCE--ESSSBCSSSCSBCBCC
T ss_pred eeCCCCCCE--eccccCcCCCCcCCCC
Confidence 579999876 4577899999987665
No 164
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.55 E-value=7 Score=28.59 Aligned_cols=34 Identities=29% Similarity=0.722 Sum_probs=27.8
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+.|...|- +-|-.|+.|+..+....+|.+-
T Consensus 18 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H 65 (77)
T 2cot_A 18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65 (77)
T ss_dssp SSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHH
T ss_pred CEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHH
Confidence 689999987765 3456899999999999998774
No 165
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=59.53 E-value=3.3 Score=23.69 Aligned_cols=25 Identities=28% Similarity=0.584 Sum_probs=20.5
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..=++-.|...|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~h~ 27 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRVHT 27 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred CccCCCCCcccCCHHHHHHHHHhcC
Confidence 4899999999988888888876663
No 166
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=59.13 E-value=5 Score=34.78 Aligned_cols=47 Identities=23% Similarity=0.599 Sum_probs=31.9
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccchhhhcc-CCCCCCCCCCCCCC
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLRHSN 418 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~-lh~CPgC~~~~~~~ 418 (425)
..|.-|...|.++ .. ..|+..||..|=.-.-+. -..||-|-......
T Consensus 79 ~~C~IC~~~~~~p-------v~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 79 FMCVCCQELVYQP-------VT-TECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp TBCTTTSSBCSSE-------EE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred CEeecCChhhcCC-------EE-cCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 4699998777543 22 479999999995433332 33799998755443
No 167
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.09 E-value=5.6 Score=28.57 Aligned_cols=34 Identities=18% Similarity=0.555 Sum_probs=27.5
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+.|...|- +-|-.|+.|+..+...-.|.+-
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H 56 (70)
T 1x5w_A 9 PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHH
Confidence 699999987664 3456899999999998888764
No 168
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.05 E-value=2.3 Score=30.44 Aligned_cols=10 Identities=20% Similarity=0.687 Sum_probs=5.2
Q ss_pred eEEcCCCCcc
Q 014393 304 GYTCPRCKAR 313 (425)
Q Consensus 304 Gy~Cp~C~s~ 313 (425)
-|.|++|+..
T Consensus 18 ~~~C~~C~k~ 27 (73)
T 2ctu_A 18 SQKCSKCGII 27 (73)
T ss_dssp EEECSSSCCE
T ss_pred CeeCCcccch
Confidence 4666655443
No 169
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.88 E-value=2 Score=33.72 Aligned_cols=37 Identities=24% Similarity=0.457 Sum_probs=31.5
Q ss_pred eEEcCCCCcccc----------------CCCCCCCCCCceecCchhHHhh--hcc
Q 014393 304 GYTCPRCKARVC----------------ELPTDCRICGLQLVSSPHLARS--YHH 340 (425)
Q Consensus 304 Gy~Cp~C~s~~C----------------~lP~~C~~C~l~Lvs~phLars--yhh 340 (425)
-|.|+.|...|- +-|-.|+.|+..+....+|.+- .||
T Consensus 24 ~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~ 78 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH 78 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred CcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence 799999999887 4467999999999999999875 455
No 170
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=58.86 E-value=3 Score=36.53 Aligned_cols=48 Identities=27% Similarity=0.504 Sum_probs=34.0
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhcc-CCCCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLRHSN 418 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~-lh~CPgC~~~~~~~ 418 (425)
.-.|..|...|.++ +++ .|+..||.+|-.-.-+. -..||-|......+
T Consensus 18 ~~~C~IC~~~~~~p-------v~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (170)
T 3hcs_A 18 KYECPICLMALREA-------VQT-PCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (170)
T ss_dssp GGBCTTTCSBCSSE-------EEC-TTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCChhhcCc-------EEC-CCCCHHHHHHHHHHHHhCCCCCCCCccCcchh
Confidence 45899999777542 455 59999999996544333 34999997655443
No 171
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=58.54 E-value=7 Score=30.75 Aligned_cols=34 Identities=29% Similarity=0.504 Sum_probs=29.6
Q ss_pred eEEcCCCCccc-c-------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARV-C-------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~-C-------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|++|+..| - +-|-.|..||..+....+|.+-
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHH
T ss_pred CcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHH
Confidence 69999999988 3 4578999999999999999765
No 172
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.26 E-value=4.9 Score=26.23 Aligned_cols=25 Identities=24% Similarity=0.526 Sum_probs=19.6
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|=..=++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGGGTS
T ss_pred CeECCCCCCeeCCHHHHHHHhhhcC
Confidence 4888888888888888888876663
No 173
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.16 E-value=3.4 Score=26.98 Aligned_cols=24 Identities=29% Similarity=0.818 Sum_probs=19.4
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRTH 35 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHHC
T ss_pred CeeCCCCCCccCCHHHHHHHHHHh
Confidence 488999999998888888876555
No 174
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=57.96 E-value=1.3 Score=35.19 Aligned_cols=77 Identities=22% Similarity=0.486 Sum_probs=51.8
Q ss_pred CCCCCC--CCceecCchhHHhh--hcccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCCC--------CCCcc
Q 014393 318 PTDCRI--CGLQLVSSPHLARS--YHHLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSGN--------KPGLY 383 (425)
Q Consensus 318 P~~C~~--C~l~Lvs~phLars--yhhlfp~~~f~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~--------~~~~~ 383 (425)
|-.|+. |+..+.+...|.+- .|+- . ..-.|. .|.+.|..... .....
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~ 66 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTG--E-----------------KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHHHHT--T-----------------CCEECCSTTCCCEESSHHHHHHHHHHHHCCCC
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHhhCC--C-----------------CCccCCCCCCcCccCCHHHHHHHHHHcCCCCC
Confidence 345665 88888888888664 2321 1 123587 79888864320 12235
Q ss_pred eeCCCCCcccccccchhhhccCC------CC--CCCCC
Q 014393 384 VACPKCKKHFCLECDIYIHESLH------NC--PGCES 413 (425)
Q Consensus 384 ~~C~~C~~~fC~dCD~fiHe~lh------~C--PgC~~ 413 (425)
|.|+.|+..|=..=++-.|...| .| |.|..
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~ 104 (119)
T 2jp9_A 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQK 104 (119)
T ss_dssp EECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCC
T ss_pred ccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCcc
Confidence 99999999999888888886554 58 88864
No 175
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=57.74 E-value=4.2 Score=26.60 Aligned_cols=24 Identities=21% Similarity=0.591 Sum_probs=18.5
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|=..-++..|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNVH 35 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHHc
Confidence 478888888888888877776655
No 176
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=57.49 E-value=3.8 Score=27.13 Aligned_cols=8 Identities=50% Similarity=1.738 Sum_probs=5.9
Q ss_pred eEEcCCCC
Q 014393 304 GYTCPRCK 311 (425)
Q Consensus 304 Gy~Cp~C~ 311 (425)
||+||.|.
T Consensus 5 GFiCP~C~ 12 (34)
T 3mjh_B 5 GFICPQCM 12 (34)
T ss_dssp EEECTTTC
T ss_pred ccCCcHHH
Confidence 78888654
No 177
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.46 E-value=5.4 Score=31.15 Aligned_cols=46 Identities=30% Similarity=0.572 Sum_probs=33.9
Q ss_pred CCCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCC
Q 014393 361 RSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCP 409 (425)
Q Consensus 361 ~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CP 409 (425)
.+...|.-|+.+|.--... .-.|+.|++..|.+|-+|.-...--|-
T Consensus 23 ~~~r~CarC~~~LG~l~~~---g~~C~~Ck~rVC~~Crv~~~~~~W~C~ 68 (76)
T 2csz_A 23 YSDRTCARCQESLGRLSPK---TNTCRGCNHLVCRDCRIQESNGTWRCK 68 (76)
T ss_dssp CCCCBCSSSCCBCSSSCTT---TSEETTTTEECCTTSEEECSTTCEEEH
T ss_pred CCccchhhhCccccccccC---CCcCcccChhhcccccccCCCCCEEEe
Confidence 4577999999998644322 346999999999999999744444443
No 178
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.18 E-value=4.4 Score=26.42 Aligned_cols=24 Identities=25% Similarity=0.730 Sum_probs=19.0
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRIH 35 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred CeeCCCCCchhCCHHHHHHHHHHc
Confidence 488888888888888888886655
No 179
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=56.86 E-value=4.8 Score=29.29 Aligned_cols=34 Identities=38% Similarity=0.803 Sum_probs=27.5
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
.|.|+.|...|- +-|-.|+.|+..+....+|.+-
T Consensus 17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H 64 (74)
T 2lce_A 17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64 (74)
T ss_dssp SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHH
T ss_pred CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHH
Confidence 689999987764 3466899999999998888764
No 180
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=56.81 E-value=2.6 Score=29.69 Aligned_cols=25 Identities=28% Similarity=0.745 Sum_probs=16.9
Q ss_pred eEEcCCCCc-cccCCC----CCCCCCCcee
Q 014393 304 GYTCPRCKA-RVCELP----TDCRICGLQL 328 (425)
Q Consensus 304 Gy~Cp~C~s-~~C~lP----~~C~~C~l~L 328 (425)
-+.||.|++ ..=.-+ .+|+.||+.+
T Consensus 5 ~~~CP~C~~~~l~~d~~~gelvC~~CG~v~ 34 (50)
T 1pft_A 5 QKVCPACESAELIYDPERGEIVCAKCGYVI 34 (50)
T ss_dssp CCSCTTTSCCCEEEETTTTEEEESSSCCBC
T ss_pred cEeCcCCCCcceEEcCCCCeEECcccCCcc
Confidence 578999987 322222 4899999865
No 181
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.80 E-value=4.5 Score=26.42 Aligned_cols=24 Identities=21% Similarity=0.527 Sum_probs=19.3
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQRVH 35 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHHc
Confidence 488888988888888888886665
No 182
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=56.45 E-value=3.9 Score=26.77 Aligned_cols=24 Identities=25% Similarity=0.591 Sum_probs=19.8
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|-..-++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKIH 35 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTGG
T ss_pred CcCCCCCcchhCCHHHHHHHHHhc
Confidence 588999999998888888886665
No 183
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=61.13 E-value=2.3 Score=24.61 Aligned_cols=25 Identities=20% Similarity=0.466 Sum_probs=20.4
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~h~ 27 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRIHT 27 (30)
Confidence 4889999999988888888876663
No 184
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=56.14 E-value=5.2 Score=42.12 Aligned_cols=57 Identities=23% Similarity=0.380 Sum_probs=37.7
Q ss_pred hhcccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCC
Q 014393 337 SYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 413 (425)
Q Consensus 337 syhhlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~ 413 (425)
.-+|-|....|.. .+.|..|...|..-. ..+|.|..|+..+|..|-..+ ..|++=..
T Consensus 516 ~~~H~F~~~~~~~-------------~t~C~~C~~~l~gl~---~qg~~C~~C~~~vHk~C~~~v----~~C~~~~~ 572 (587)
T 3ky9_A 516 ANGHDFQMFSFEE-------------TTSCKACQMLLRGTF---YQGYRCHRCRASAHKECLGRV----PPCGRHGQ 572 (587)
T ss_dssp GGGCCEEEECCSS-------------CCBCTTTCSBCCSSS---CCEEEETTTCCEECSGGGGGS----CCC-----
T ss_pred ccCCceeEEeCCC-------------Ccccccccccccccc---cCCcCCCCCCCccchhhhhcC----CCCCCCCc
Confidence 3456666555543 458999988775322 247999999999999998876 36765543
No 185
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.79 E-value=9.2 Score=28.49 Aligned_cols=44 Identities=20% Similarity=0.599 Sum_probs=31.3
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcc-cccccchhhhccCCCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRHS 417 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCD~fiHe~lh~CPgC~~~~~~ 417 (425)
....|..|...+.+. .---|++. ||.+|.. .+..||.|-.....
T Consensus 14 ~~~~C~IC~~~~~~~--------v~~pCgH~~~C~~C~~----~~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNW--------VLLPCRHTCLCDGCVK----YFQQCPMCRQFVQE 58 (68)
T ss_dssp CSSCCSSSSSSCCCC--------EETTTTBCCSCTTHHH----HCSSCTTTCCCCCC
T ss_pred CCCCCCCcCcCCCCE--------EEECCCChhhhHHHHh----cCCCCCCCCcchhc
Confidence 356899998554321 22358888 9999987 46899999875543
No 186
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=60.68 E-value=2.4 Score=24.56 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=20.3
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVRQHT 26 (29)
Confidence 3889999999988888888877663
No 187
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=55.67 E-value=2.8 Score=25.40 Aligned_cols=25 Identities=28% Similarity=0.418 Sum_probs=21.2
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..-++-.|...|.
T Consensus 2 p~~C~~C~k~f~~~~~L~~H~~~H~ 26 (32)
T 2kfq_A 2 AFACPACPKRFMRSDALSKHIKTAF 26 (32)
T ss_dssp CSSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHc
Confidence 3889999999998888888887774
No 188
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=55.24 E-value=5.7 Score=32.89 Aligned_cols=26 Identities=31% Similarity=0.690 Sum_probs=14.6
Q ss_pred ccccccccccCCCCCCCcceeCCCCCccc
Q 014393 365 TCFGCQQSLLSSGNKPGLYVACPKCKKHF 393 (425)
Q Consensus 365 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~f 393 (425)
.|-.|...|.+... ..-+||.|++..
T Consensus 69 ~C~~CG~~F~~~~~---kPsrCP~CkSe~ 94 (105)
T 2gmg_A 69 QCRKCGFVFKAEIN---IPSRCPKCKSEW 94 (105)
T ss_dssp BBTTTCCBCCCCSS---CCSSCSSSCCCC
T ss_pred ChhhCcCeecccCC---CCCCCcCCCCCc
Confidence 57777777721111 124577777654
No 189
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.20 E-value=6.9 Score=28.66 Aligned_cols=39 Identities=23% Similarity=0.462 Sum_probs=31.5
Q ss_pred eEEcCCCCcccc-----------------CCCCCCCCCCceecCchhHHhhh--cccC
Q 014393 304 GYTCPRCKARVC-----------------ELPTDCRICGLQLVSSPHLARSY--HHLF 342 (425)
Q Consensus 304 Gy~Cp~C~s~~C-----------------~lP~~C~~C~l~Lvs~phLarsy--hhlf 342 (425)
-|.|+.|...|- +-|-.|+.|+..+.....|.+-. ||--
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~ 64 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence 699999998764 45779999999999999998764 5643
No 190
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.11 E-value=4.6 Score=26.43 Aligned_cols=24 Identities=21% Similarity=0.544 Sum_probs=18.8
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..=++..|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQRVH 35 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGGGG
T ss_pred CeeCcccCchhCCHHHHHHHHHhc
Confidence 488888888888888887776655
No 191
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.00 E-value=5.1 Score=26.16 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=20.3
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLIHT 36 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTTTC
T ss_pred CeECCCCCchhCCHHHHHHHHHHcC
Confidence 5889999999988888888876663
No 192
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=54.72 E-value=5.7 Score=31.29 Aligned_cols=31 Identities=26% Similarity=0.672 Sum_probs=24.0
Q ss_pred CCccccccc-cccCCCCCCCcceeCCCCCc----ccccccch
Q 014393 363 RSTCFGCQQ-SLLSSGNKPGLYVACPKCKK----HFCLECDI 399 (425)
Q Consensus 363 ~~~C~~C~~-~~~~~~~~~~~~~~C~~C~~----~fC~dCD~ 399 (425)
...|-+|.+ ++. ..||+|..|.. .+|.+|-.
T Consensus 21 ~~~Cd~C~~~pI~------G~RykC~~C~d~~~yDLC~~C~~ 56 (82)
T 2fc7_A 21 GFKCDNCGIEPIQ------GVRWHCQDCPPEMSLDFCDSCSD 56 (82)
T ss_dssp SCCCSSSCCSSEE------SCEEEESSSCSSSCCEEEGGGTT
T ss_pred cCCCCCCCCCcce------eceEECCcCCCCcceecHHHHHh
Confidence 447999985 443 25899999987 79999964
No 193
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.69 E-value=6.4 Score=25.70 Aligned_cols=24 Identities=25% Similarity=0.656 Sum_probs=19.9
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTT
T ss_pred CeECCcCCCccCCHHHHHHHHHHh
Confidence 588999999998888888887665
No 194
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.48 E-value=3.2 Score=30.49 Aligned_cols=45 Identities=22% Similarity=0.493 Sum_probs=33.0
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 415 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~ 415 (425)
....|.-|...+.. .-..|++.||.+|-.-.-..-..||-|-...
T Consensus 14 ~~~~C~IC~~~~~~---------~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 58 (70)
T 2ecn_A 14 DEEECCICMDGRAD---------LILPCAHSFCQKCIDKWSDRHRNCPICRLQM 58 (70)
T ss_dssp CCCCCSSSCCSCCS---------EEETTTEEECHHHHHHSSCCCSSCHHHHHCT
T ss_pred CCCCCeeCCcCccC---------cccCCCCcccHHHHHHHHHCcCcCCCcCCcc
Confidence 45689999866642 2346999999999775555778999997533
No 195
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=54.42 E-value=5 Score=23.13 Aligned_cols=24 Identities=25% Similarity=0.528 Sum_probs=20.1
Q ss_pred eeCCCCCcccccccchhhh-ccCCC
Q 014393 384 VACPKCKKHFCLECDIYIH-ESLHN 407 (425)
Q Consensus 384 ~~C~~C~~~fC~dCD~fiH-e~lh~ 407 (425)
|.|+.|+..|-..-.+..| ...|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 3 YACGLCNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp SBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred cCCcccCcccCChHHHHHHHHHHcc
Confidence 8899999999988888888 66663
No 196
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=54.29 E-value=9.3 Score=33.32 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=39.4
Q ss_pred CcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhC-CcEEEEEEecc-hHHHHHHHHH
Q 014393 167 GDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKES-KIRCSVIGLSA-EMFICKHLCQ 239 (425)
Q Consensus 167 G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~-~I~V~vIglg~-e~~iLk~iA~ 239 (425)
+++.+.-++++-.- ..+ - ..+||++++ +|+..+++.+++. |++|.++|... -..-|++.|+
T Consensus 92 ~~~Dv~laiD~~~~-a~~-----~-d~~vLvSgD-----~DF~plv~~lr~~~G~~V~v~g~~~~~s~~L~~~ad 154 (165)
T 2qip_A 92 GDWDVGITLDAIEI-APD-----V-DRVILVSGD-----GDFSLLVERIQQRYNKKVTVYGVPRLTSQTLIDCAD 154 (165)
T ss_dssp CCCHHHHHHHHHHH-GGG-----C-SEEEEECCC-----GGGHHHHHHHHHHHCCEEEEEECGGGSCHHHHHHSS
T ss_pred CCccHHHHHHHHHh-hcc-----C-CEEEEEECC-----hhHHHHHHHHHHHcCcEEEEEeCCCcChHHHHHhCC
Confidence 56676666554322 111 1 245555542 4778899999996 99999999854 2466777775
No 197
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=54.23 E-value=4.6 Score=26.46 Aligned_cols=24 Identities=25% Similarity=0.678 Sum_probs=20.1
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|-..=++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRMH 35 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHHc
Confidence 589999999999888888886665
No 198
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=54.22 E-value=2.6 Score=32.35 Aligned_cols=67 Identities=21% Similarity=0.351 Sum_probs=39.2
Q ss_pred CCCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCCC--------CCCcceeCCCCC
Q 014393 322 RICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSGN--------KPGLYVACPKCK 390 (425)
Q Consensus 322 ~~C~l~Lvs~phLarsyh-hlfp~~~f~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~--------~~~~~~~C~~C~ 390 (425)
+.|+..+....+|.+-.- |. ... .-.|. .|.+.|..... .....|.|+.|+
T Consensus 21 ~~C~~~f~~~~~l~~H~~~h~-~~~-----------------~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~ 82 (100)
T 2ebt_A 21 PGCTKVYTKSSHLKAHLRTHT-GEK-----------------PYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82 (100)
T ss_dssp SSCCCEESCHHHHHHHHHHHS-CCC-----------------CEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSC
T ss_pred CCCCCcccCHHHHHHHHHHhC-CCC-----------------CeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCc
Confidence 347888888777765321 21 111 22464 67777754310 112358999999
Q ss_pred cccccccchhhhccCC
Q 014393 391 KHFCLECDIYIHESLH 406 (425)
Q Consensus 391 ~~fC~dCD~fiHe~lh 406 (425)
..|=..-++..|...|
T Consensus 83 ~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 83 RSFSRSDHLALHMKRH 98 (100)
T ss_dssp CBCSSHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHh
Confidence 9987777776665444
No 199
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=54.14 E-value=3.3 Score=34.02 Aligned_cols=57 Identities=18% Similarity=0.433 Sum_probs=37.3
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCCCc
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNP 419 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~ 419 (425)
....|.-|+..|.++... ...-.-..|++.||.+|=.-.-+.-..||.|........
T Consensus 6 ~~~~C~IC~~~~~~~~~~-~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQN-GRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 62 (133)
T ss_dssp CSCBCTTTCCBHHHHHHT-TCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTC
T ss_pred CCCCCcccChhhhCcccc-ccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCcccc
Confidence 345799999777543000 011245589999999997655556679999987555433
No 200
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.12 E-value=5.2 Score=26.11 Aligned_cols=24 Identities=25% Similarity=0.499 Sum_probs=18.5
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRRIH 35 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHTTT
T ss_pred CeECCCCCceeCCHHHHHHHHHHh
Confidence 478888888888877777776665
No 201
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.10 E-value=6.5 Score=25.66 Aligned_cols=24 Identities=29% Similarity=0.560 Sum_probs=19.3
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRTH 35 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTTT
T ss_pred CcCCCccChhhCChHHHHHHHHHh
Confidence 488888888888888888886665
No 202
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=54.09 E-value=3.7 Score=23.60 Aligned_cols=24 Identities=21% Similarity=0.310 Sum_probs=19.1
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|=..=++-.|...|
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~H 26 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMRGH 26 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHTTC
T ss_pred CcCCCCCCcccCCHHHHHHHHHhc
Confidence 489999999998777777776665
No 203
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.06 E-value=6.9 Score=25.48 Aligned_cols=25 Identities=24% Similarity=0.470 Sum_probs=20.2
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTTC
T ss_pred CeECCCCCchhCChHHHHHHHhhcC
Confidence 5889999999988888888876663
No 204
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.88 E-value=5.6 Score=25.92 Aligned_cols=24 Identities=25% Similarity=0.618 Sum_probs=20.6
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTT
T ss_pred CeeCcccCcccCChHHHHHHHHHh
Confidence 589999999999988888887766
No 205
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=53.10 E-value=5.2 Score=26.03 Aligned_cols=24 Identities=25% Similarity=0.528 Sum_probs=19.6
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRVH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGGG
T ss_pred CeECCccccccCChHHHHHHHHHh
Confidence 588999999998888888886655
No 206
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.97 E-value=4.2 Score=26.58 Aligned_cols=24 Identities=25% Similarity=0.610 Sum_probs=19.5
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRVH 35 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHHc
Confidence 488999999988888888887665
No 207
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=52.62 E-value=3 Score=32.68 Aligned_cols=16 Identities=44% Similarity=0.991 Sum_probs=13.6
Q ss_pred cccccccchhh-hccCC
Q 014393 391 KHFCLECDIYI-HESLH 406 (425)
Q Consensus 391 ~~fC~dCD~fi-He~lh 406 (425)
+.||..||+|+ ||+..
T Consensus 3 kYyCdYCd~~lt~Ds~s 19 (77)
T 3cw1_L 3 KFYCDYCDTYLTHDSPS 19 (77)
T ss_pred CcccccCCceecCCCHH
Confidence 57999999999 99753
No 208
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.52 E-value=4.2 Score=26.51 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=18.7
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQRIH 35 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHGGG
T ss_pred CeECCCcChhhCCHHHHHHHHHHc
Confidence 488888888888888887776655
No 209
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.89 E-value=5 Score=26.21 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=19.7
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKVH 35 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHhh
Confidence 488999999888888888887665
No 210
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.88 E-value=7.3 Score=25.28 Aligned_cols=24 Identities=33% Similarity=0.825 Sum_probs=19.8
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQRVH 35 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTT
T ss_pred CeECCCcCcccCCHHHHHHHHHHh
Confidence 488999999998888888887666
No 211
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=51.85 E-value=8.5 Score=27.05 Aligned_cols=33 Identities=15% Similarity=0.376 Sum_probs=23.7
Q ss_pred eEEcCCCCcccc----------------CCCCCCCCCCceecCchhHHh
Q 014393 304 GYTCPRCKARVC----------------ELPTDCRICGLQLVSSPHLAR 336 (425)
Q Consensus 304 Gy~Cp~C~s~~C----------------~lP~~C~~C~l~Lvs~phLar 336 (425)
-|.|+.|+..|- +-|-.|+.|+..+.....|.+
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~ 58 (66)
T 2drp_A 10 TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTA 58 (66)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHH
T ss_pred ceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHH
Confidence 688888876543 234578888888888777765
No 212
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=51.80 E-value=4 Score=29.88 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=33.1
Q ss_pred CCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCcccc--ccccccCCCC--------CCCcceeCCC
Q 014393 321 CRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFG--CQQSLLSSGN--------KPGLYVACPK 388 (425)
Q Consensus 321 C~~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~~~C~~--C~~~~~~~~~--------~~~~~~~C~~ 388 (425)
|+.|+..+.+..+|.+-. +|.- .+ .-.|.- |.+.|..... .....|.|+.
T Consensus 12 ~~~C~~~f~~~~~L~~H~~~~H~~-~~-----------------~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 73 (79)
T 2dlk_A 12 FPGCGRIFSNRQYLNHHKKYQHIH-QK-----------------SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 73 (79)
T ss_dssp STTTCCEESSHHHHHHHHHHGGGS-CC-----------------CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred CCCCcCccCCHHHHHHHHHHHhCC-CC-----------------CeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC
Confidence 556999999999998764 3431 11 224665 7777754310 0123478888
Q ss_pred CCccc
Q 014393 389 CKKHF 393 (425)
Q Consensus 389 C~~~f 393 (425)
|+..|
T Consensus 74 C~k~F 78 (79)
T 2dlk_A 74 SGPSS 78 (79)
T ss_dssp SSCCC
T ss_pred CCCCC
Confidence 87766
No 213
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.75 E-value=9.3 Score=27.55 Aligned_cols=24 Identities=38% Similarity=0.747 Sum_probs=18.6
Q ss_pred eEEcCCCCccccCCCCCCCCCCce
Q 014393 304 GYTCPRCKARVCELPTDCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP~~C~~C~l~ 327 (425)
-++||.|++..=.=-..|.-||.+
T Consensus 14 k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 14 KYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp EEECTTTCCEECTTCSSCSSSSSC
T ss_pred CccCCCCCCcCCCCceecCCCCCc
Confidence 689999999933223589999977
No 214
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=51.72 E-value=3.6 Score=23.42 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=18.1
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|=..-++-.|...|
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~H 26 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRTH 26 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHC
T ss_pred CccCCCcChhhCCHHHHHHHHHHc
Confidence 489999999987776666665544
No 215
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=51.45 E-value=6.2 Score=28.30 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=10.4
Q ss_pred eeCCCCCcccccccchhhhc
Q 014393 384 VACPKCKKHFCLECDIYIHE 403 (425)
Q Consensus 384 ~~C~~C~~~fC~dCD~fiHe 403 (425)
|.|+.|+..|-..=++..|.
T Consensus 38 ~~C~~C~~~f~~~~~L~~H~ 57 (70)
T 1x5w_A 38 FKCNYCSFDTKQPSNLSKHM 57 (70)
T ss_dssp EECSSSSCEESSHHHHHHHH
T ss_pred EeCCCCCCccCCHHHHHHHH
Confidence 55555555555444444443
No 216
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=51.21 E-value=8.9 Score=28.00 Aligned_cols=38 Identities=24% Similarity=0.484 Sum_probs=29.1
Q ss_pred eEEcCCCCccccC----------------CCCCCCCCCceecCchhHHhh--hccc
Q 014393 304 GYTCPRCKARVCE----------------LPTDCRICGLQLVSSPHLARS--YHHL 341 (425)
Q Consensus 304 Gy~Cp~C~s~~C~----------------lP~~C~~C~l~Lvs~phLars--yhhl 341 (425)
-|.|+.|...|-. -|-.|+.|+..+.....|.+- .||-
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 70 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS 70 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence 6999999876541 356899999999999988764 3454
No 217
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=51.13 E-value=2.3 Score=24.33 Aligned_cols=24 Identities=25% Similarity=0.564 Sum_probs=18.9
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|-..-++-.|...|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H 25 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRIH 25 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHHh
Confidence 488999999998877777776544
No 218
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=50.97 E-value=6.2 Score=32.11 Aligned_cols=47 Identities=26% Similarity=0.537 Sum_probs=32.3
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhc-cCCCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCESLRHS 417 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe-~lh~CPgC~~~~~~ 417 (425)
...|.-|...+.++ .. ..|++.||.+|=.-.-+ .-..||-|......
T Consensus 23 ~~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 23 SISCQICEHILADP-------VE-TSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HTBCTTTCSBCSSE-------EE-CTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCcHhcCc-------EE-cCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 34799998777532 22 47999999999543323 35689999875543
No 219
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.94 E-value=5.9 Score=25.82 Aligned_cols=24 Identities=33% Similarity=0.693 Sum_probs=19.7
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMVH 35 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGGG
T ss_pred CccCCCccchhCCHHHHHHHHHHh
Confidence 588999999998888888886665
No 220
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=50.52 E-value=5.8 Score=27.37 Aligned_cols=42 Identities=17% Similarity=0.380 Sum_probs=27.2
Q ss_pred ccccccccccCCC--------CCCCcceeCCCCCcccccccchhhh-ccCC
Q 014393 365 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIH-ESLH 406 (425)
Q Consensus 365 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCD~fiH-e~lh 406 (425)
.|.-|.+.|.... -.....|.|+.|+..|=..=++-.| ...|
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H 54 (60)
T 2adr_A 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54 (60)
T ss_dssp CCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred cCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence 4777877775431 0122358888888888777777777 3555
No 221
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=50.46 E-value=5.3 Score=28.48 Aligned_cols=28 Identities=18% Similarity=0.611 Sum_probs=19.3
Q ss_pred eEEcCCCCcccc-----------CCCCCCCCCCceecCc
Q 014393 304 GYTCPRCKARVC-----------ELPTDCRICGLQLVSS 331 (425)
Q Consensus 304 Gy~Cp~C~s~~C-----------~lP~~C~~C~l~Lvs~ 331 (425)
.|.|+.|+..|- +-|-.|+.||..+...
T Consensus 14 ~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~ 52 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEED 52 (62)
T ss_dssp EEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEEC
T ss_pred CccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccC
Confidence 799999887553 3456788888776543
No 222
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=50.43 E-value=5.1 Score=24.66 Aligned_cols=24 Identities=25% Similarity=0.652 Sum_probs=20.1
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|-..-++..|...|
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~H 34 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKRH 34 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred CccCCCCCcccCcHHHHHHHHHHh
Confidence 589999999998888888787665
No 223
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.33 E-value=5.5 Score=24.36 Aligned_cols=25 Identities=28% Similarity=0.446 Sum_probs=21.4
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLVHG 33 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHHhc
Confidence 5999999999998888888887763
No 224
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.96 E-value=8.5 Score=25.06 Aligned_cols=24 Identities=25% Similarity=0.682 Sum_probs=19.8
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKIH 35 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGGT
T ss_pred CeECCCCCchhCCHHHHHHHHHHh
Confidence 588999999998888888887666
No 225
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=49.95 E-value=9.1 Score=28.76 Aligned_cols=37 Identities=30% Similarity=0.659 Sum_probs=28.1
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh--hcc
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS--YHH 340 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars--yhh 340 (425)
-|.|+.|...|- +-|-.|+.|+..+.....|.+- .||
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~ 55 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC
Confidence 488898887664 3466899999999988888764 445
No 226
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=49.84 E-value=5.7 Score=26.36 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=22.4
Q ss_pred ceeCCCCCcccccccchhhhccCC------CCCCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH------NCPGCE 412 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh------~CPgC~ 412 (425)
.|.|+.|+..|=..-.+-.|...| .|+-|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~ 47 (48)
T 2epr_A 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47 (48)
T ss_dssp SEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 588888888888888887776665 466663
No 227
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=49.81 E-value=4.6 Score=40.85 Aligned_cols=47 Identities=19% Similarity=0.372 Sum_probs=33.9
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhc-cCCCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCESLRHS 417 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe-~lh~CPgC~~~~~~ 417 (425)
...|.-|...+.++ ....|++.||.+|-.-.-+ .-..||-|-.....
T Consensus 332 ~~~C~ICle~~~~p--------v~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 332 FQLCKICAENDKDV--------KIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKG 379 (389)
T ss_dssp SSBCTTTSSSBCCE--------EEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCE
T ss_pred CCCCCccCcCCCCe--------EEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCC
Confidence 35899998666421 3467999999999754444 56799999875543
No 228
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.65 E-value=5.6 Score=25.96 Aligned_cols=24 Identities=25% Similarity=0.595 Sum_probs=18.9
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGG
T ss_pred CeeCCCcCCccCCHHHHHHHHHHh
Confidence 488888988888888887776554
No 229
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=49.64 E-value=4.4 Score=26.55 Aligned_cols=24 Identities=29% Similarity=0.636 Sum_probs=16.7
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKLH 35 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHHH
T ss_pred CcccCccCcccCCHHHHHHHHHHc
Confidence 477888888777777777665443
No 230
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.48 E-value=6.9 Score=25.39 Aligned_cols=24 Identities=25% Similarity=0.563 Sum_probs=17.2
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRIH 35 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTTT
T ss_pred CcCCCCCCCccCCHHHHHHHHHhc
Confidence 477878887777777777776655
No 231
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=49.33 E-value=12 Score=31.01 Aligned_cols=85 Identities=19% Similarity=0.269 Sum_probs=56.0
Q ss_pred CCCCCCCCCceecCchhHHhhh--cccCCC--CCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCcce
Q 014393 317 LPTDCRICGLQLVSSPHLARSY--HHLFPI--APFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYV 384 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLarsy--hhlfp~--~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~ 384 (425)
.+-.|+.|+..+.+...|.+-. ||.-.. ..+.. ..-.|..|.+.|..... .....|
T Consensus 24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~ 91 (155)
T 2rpc_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC------------YWEECPREGKSFKAKYKLVNHIRVHTGEKPF 91 (155)
T ss_dssp CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC------------CBTTCTTSSCCCSSHHHHHHHTHHHHCCCSE
T ss_pred cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc------------cccCCCCcccccCCHHHHHHHHHhcCCCCcc
Confidence 4557888999999999888753 354211 11110 11369999888864310 012359
Q ss_pred eCCC--CCcccccccchhhhccCC------CCCC--CCC
Q 014393 385 ACPK--CKKHFCLECDIYIHESLH------NCPG--CES 413 (425)
Q Consensus 385 ~C~~--C~~~fC~dCD~fiHe~lh------~CPg--C~~ 413 (425)
.|+. |+..|=..=++-.|...| .|+. |..
T Consensus 92 ~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k 130 (155)
T 2rpc_A 92 PCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDR 130 (155)
T ss_dssp ECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCC
T ss_pred cCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCC
Confidence 9988 999998888888886655 6885 864
No 232
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.93 E-value=6.1 Score=25.69 Aligned_cols=24 Identities=29% Similarity=0.631 Sum_probs=18.4
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGG
T ss_pred CeECCCCChhhCCHHHHHHHHHhc
Confidence 488888888888877777776554
No 233
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=48.79 E-value=10 Score=27.56 Aligned_cols=33 Identities=33% Similarity=0.793 Sum_probs=24.2
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLAR 336 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLar 336 (425)
.|.|+.|...|- +-|-.|+.|+..+.+...|.+
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 75 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLIT 75 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHH
T ss_pred CeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHH
Confidence 588888877664 346678888888888777754
No 234
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=48.50 E-value=12 Score=30.21 Aligned_cols=34 Identities=21% Similarity=0.526 Sum_probs=28.8
Q ss_pred eEEcCCCCcccc------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+.|+..|- +-|-.|+.||..+....+|.+-
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H 119 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDH 119 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHH
T ss_pred CeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHH
Confidence 799999998664 4677999999999999988764
No 235
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=48.49 E-value=3.4 Score=32.47 Aligned_cols=25 Identities=28% Similarity=0.656 Sum_probs=20.5
Q ss_pred ceeCCCCCcccccccchhhhcc-CCC
Q 014393 383 YVACPKCKKHFCLECDIYIHES-LHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~-lh~ 407 (425)
.|.|+.|+..|-..-++..|.. .|.
T Consensus 69 ~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 69 KLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp GGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCccccchhCCHHHHHHHHHHHcC
Confidence 5889999999988888888884 663
No 236
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=48.49 E-value=5 Score=24.34 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=21.3
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++..|...|.
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~H~ 31 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKVHT 31 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGGGT
T ss_pred CeeCCCCCcccCCHHHHHHHHHHcC
Confidence 5999999999999888888877663
No 237
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=48.42 E-value=12 Score=28.16 Aligned_cols=34 Identities=32% Similarity=0.700 Sum_probs=22.9
Q ss_pred eEEcCCCCccccC----------------CCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVCE----------------LPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C~----------------lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+.|...|-. -|-.|+.|+..+.....|.+-
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H 84 (95)
T 2yt9_A 35 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH 84 (95)
T ss_dssp SEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence 5777777765531 456777777777777777654
No 238
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.40 E-value=3.8 Score=26.84 Aligned_cols=24 Identities=25% Similarity=0.540 Sum_probs=18.7
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CeECCCCCCeeCChHHHHHHHHHc
Confidence 488999999888888887775544
No 239
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=47.73 E-value=9.4 Score=32.80 Aligned_cols=39 Identities=28% Similarity=0.661 Sum_probs=30.3
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhc
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE 403 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe 403 (425)
+...|.-|+.+|.-.. ...-.|..|+..+|..|-+++..
T Consensus 54 ~~~~C~~C~~~~g~l~---~~g~~C~~C~~~VC~~C~~~~~~ 92 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLG---SASVVCEDCKKNVCTKCGVETSN 92 (134)
T ss_dssp SSSBCSSSCCBCSTTS---CCEEECTTTCCEEETTSEEECCC
T ss_pred CCccccccCCCccccc---CCCCCCCCCCcccccccCCccCC
Confidence 4678999999984221 12468999999999999999753
No 240
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.72 E-value=9.4 Score=28.03 Aligned_cols=34 Identities=21% Similarity=0.508 Sum_probs=24.5
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL 405 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~l 405 (425)
...|..|.. . ..|.||+|.-.||--=-..+|...
T Consensus 12 ~~~C~vC~~-~--------~kY~CPrC~~~yCSl~C~k~Hk~~ 45 (56)
T 2yqq_A 12 TVVCVICLE-K--------PKYRCPACRVPYCSVVCFRKHKEQ 45 (56)
T ss_dssp CCCCTTTCS-C--------CSEECTTTCCEESSHHHHHHHHHH
T ss_pred CCccCcCcC-C--------CeeeCCCCCCCeeCHHHHHHHHhh
Confidence 347999985 2 359999999999974335566654
No 241
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=47.53 E-value=16 Score=28.39 Aligned_cols=33 Identities=27% Similarity=0.653 Sum_probs=22.9
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.| .|...|- +-|-.|+.|+..+.....|.+-
T Consensus 10 ~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 56 (110)
T 2csh_A 10 LYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 56 (110)
T ss_dssp CEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHH
T ss_pred CEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHH
Confidence 5777 7776553 2456788888888887777664
No 242
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=47.36 E-value=8 Score=34.02 Aligned_cols=37 Identities=22% Similarity=0.411 Sum_probs=28.9
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhh
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI 401 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fi 401 (425)
....|.-|+.+|.-..+ ..-.|..|+..+|..|-+|.
T Consensus 67 ~~~~C~~C~~~fg~l~~---~g~~C~~C~~~VC~~C~~~~ 103 (153)
T 2zet_C 67 NETHCARCLQPYRLLLN---SRRQCLECSLFVCKSCSHAH 103 (153)
T ss_dssp GGTBCTTTCCBGGGCSS---CCEECTTTCCEECGGGEECC
T ss_pred CCccchhhcCccccccC---CCCcCCCCCchhhccccccc
Confidence 46689999998854322 24689999999999999765
No 243
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=47.18 E-value=7.8 Score=28.90 Aligned_cols=25 Identities=28% Similarity=0.785 Sum_probs=19.8
Q ss_pred EEcCCCCccccCCCCCCCCCCceecCc
Q 014393 305 YTCPRCKARVCELPTDCRICGLQLVSS 331 (425)
Q Consensus 305 y~Cp~C~s~~C~lP~~C~~C~l~Lvs~ 331 (425)
-.||.|+.. .|-..||.||....++
T Consensus 6 r~C~~Cg~Y--TLk~~CP~CG~~t~~a 30 (60)
T 2aus_D 6 RKCPKCGRY--TLKETCPVCGEKTKVA 30 (60)
T ss_dssp EECTTTCCE--ESSSBCTTTCSBCEES
T ss_pred eECCCCCCE--EccccCcCCCCccCCC
Confidence 479999876 4577899999987665
No 244
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=46.87 E-value=6.4 Score=28.60 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=31.7
Q ss_pred CccccccccccCCCC--------CCCcceeCCCCCcccccccchhhhccCCC
Q 014393 364 STCFGCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~--------~~~~~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
-.|--|.+.|..... .....|.|+.|++.|-..=++-.|...|.
T Consensus 5 y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Ht 56 (60)
T 4gzn_C 5 FFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ 56 (60)
T ss_dssp EECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGS
T ss_pred ccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccC
Confidence 368888888864320 02235999999999998888888887763
No 245
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.84 E-value=3.2 Score=25.53 Aligned_cols=24 Identities=25% Similarity=0.571 Sum_probs=20.0
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|-..-.+-.|...|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRIH 32 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHHHh
Confidence 599999999998888887776655
No 246
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=46.57 E-value=9.5 Score=21.55 Aligned_cols=20 Identities=25% Similarity=0.567 Sum_probs=15.8
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.||..+....+|.+-
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H 21 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRH 21 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHH
Confidence 45788899999888888763
No 247
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=46.46 E-value=12 Score=28.30 Aligned_cols=34 Identities=29% Similarity=0.626 Sum_probs=25.7
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+.|...|- +-|-.|+.|+..+.....|.+-
T Consensus 36 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 83 (96)
T 2dmd_A 36 PYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH 83 (96)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred CEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence 688888887664 3466888888888888877653
No 248
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=46.20 E-value=4.3 Score=26.62 Aligned_cols=24 Identities=25% Similarity=0.577 Sum_probs=17.3
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRVH 35 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHHH
T ss_pred ceECCCCCchhCCHHHHHHHHHHc
Confidence 477888888887777777665444
No 249
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=46.10 E-value=11 Score=27.90 Aligned_cols=33 Identities=30% Similarity=0.675 Sum_probs=24.1
Q ss_pred eEEcCCCCcccc--------------CCCCCCCCCCceecCchhHHh
Q 014393 304 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLAR 336 (425)
Q Consensus 304 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~phLar 336 (425)
-|.|+.|...|- +-|-.|+.|+..+.+...|.+
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 80 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR 80 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence 588888876554 345678888888888777765
No 250
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.03 E-value=5.7 Score=25.91 Aligned_cols=24 Identities=29% Similarity=0.620 Sum_probs=17.7
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMVH 35 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHHT
T ss_pred CcCCCcCCchhCCHHHHHHHHHHc
Confidence 477888888888777777775544
No 251
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=46.00 E-value=14 Score=29.64 Aligned_cols=54 Identities=4% Similarity=-0.258 Sum_probs=35.6
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCCCccccC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVAN 423 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~~~~ 423 (425)
..-.|.-|...|.++ . ...|++.||..|=.-.-+.-..||.|........++.|
T Consensus 28 ~~~~CpI~~~~m~dP-------V-~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~pn 81 (100)
T 2kre_A 28 DEFRDPLMDTLMTDP-------V-RLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPV 81 (100)
T ss_dssp TTTBCTTTCSBCSSE-------E-EETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEEC
T ss_pred HhhCCcCccCcccCC-------e-ECCCCCEEchHHHHHHHHcCCCCCCCCCCCChhhceEC
Confidence 345799998777654 1 23499999999943333345789999875554444433
No 252
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.59 E-value=9.4 Score=24.78 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=19.3
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|=..-++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHTT
T ss_pred CcCCCCCCcccCCHHHHHHHHHHh
Confidence 488889998888888888886655
No 253
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=45.43 E-value=13 Score=27.29 Aligned_cols=19 Identities=16% Similarity=0.289 Sum_probs=13.5
Q ss_pred CCCCCCCceecCchhHHhh
Q 014393 319 TDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 319 ~~C~~C~l~Lvs~phLars 337 (425)
-.|+.|+..+....+|.+-
T Consensus 16 ~~C~~C~~~f~~~~~l~~H 34 (86)
T 1x6h_A 16 YACSHCDKTFRQKQLLDMH 34 (86)
T ss_dssp EECSSSSCEESSHHHHHHH
T ss_pred CcCCCCCCccCCHHHHHHH
Confidence 3456677788888888765
No 254
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.07 E-value=5.5 Score=25.98 Aligned_cols=24 Identities=25% Similarity=0.466 Sum_probs=17.8
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CEeCCcCCCccCCHHHHHHHHHHH
Confidence 488888888888777777775444
No 255
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.03 E-value=6.4 Score=25.66 Aligned_cols=24 Identities=29% Similarity=0.617 Sum_probs=18.7
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRSH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHS
T ss_pred CcCCCCCCCcCCChHHHHHHHHHh
Confidence 488888888888887877776555
No 256
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.01 E-value=8.2 Score=27.51 Aligned_cols=14 Identities=36% Similarity=0.930 Sum_probs=11.4
Q ss_pred CCcceeCCCCCccc
Q 014393 380 PGLYVACPKCKKHF 393 (425)
Q Consensus 380 ~~~~~~C~~C~~~f 393 (425)
.+.+|.||+|+..|
T Consensus 9 ~~~~~~CPrCn~~f 22 (49)
T 2e72_A 9 DGGRKICPRCNAQF 22 (49)
T ss_dssp CSSCCCCTTTCCCC
T ss_pred cCCceeCCcccccc
Confidence 34679999999887
No 257
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=44.92 E-value=10 Score=31.01 Aligned_cols=52 Identities=17% Similarity=0.276 Sum_probs=33.6
Q ss_pred CCccccccccccCCCC----------CCCcceeCCCCCcccccccchhhhccCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGN----------KPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESL 414 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~----------~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~ 414 (425)
...|.-|...|...-. .......-..|++.|+.+|=.---..-..||-|-..
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 4579999888764310 001112235799999999965555556789999653
No 258
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.37 E-value=9.7 Score=24.69 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=19.9
Q ss_pred ceeCCCCCcccccccchhhhcc-CC
Q 014393 383 YVACPKCKKHFCLECDIYIHES-LH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~-lh 406 (425)
.|.|+.|++.|=..-++..|.. .|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H 36 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYH 36 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTT
T ss_pred CEECCccCchhCChHHHHHHhHhhc
Confidence 4889999999988888888876 55
No 259
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=44.23 E-value=12 Score=21.11 Aligned_cols=20 Identities=20% Similarity=0.519 Sum_probs=15.8
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.||..+....+|.+-
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTH 21 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHH
Confidence 45788899999888888653
No 260
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.09 E-value=14 Score=27.44 Aligned_cols=30 Identities=23% Similarity=0.823 Sum_probs=23.1
Q ss_pred Ccccccccc-ccCCCCCCCcceeCCCCCc-ccccccch
Q 014393 364 STCFGCQQS-LLSSGNKPGLYVACPKCKK-HFCLECDI 399 (425)
Q Consensus 364 ~~C~~C~~~-~~~~~~~~~~~~~C~~C~~-~fC~dCD~ 399 (425)
..|-+|.+. +. +.||+|..|.. .+|.+|-.
T Consensus 12 ~~Cd~C~~~pi~------G~RykC~~C~d~DLC~~C~~ 43 (63)
T 2e5r_A 12 VECSYCHSESMM------GFRYRCQQCHNYQLCQDCFW 43 (63)
T ss_dssp SCCSSSCCCSSC------SCEEEESSCSSCEECHHHHH
T ss_pred CCCcCCCCccee------cceEEecCCCCchhHHHHHh
Confidence 689999864 43 25899999966 49999954
No 261
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.00 E-value=6.7 Score=25.55 Aligned_cols=24 Identities=25% Similarity=0.686 Sum_probs=19.6
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHT
T ss_pred CeECCCCChhhCCHHHHHHHHHHc
Confidence 588999999998888888886555
No 262
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=43.62 E-value=6.1 Score=28.62 Aligned_cols=23 Identities=22% Similarity=0.505 Sum_probs=13.3
Q ss_pred ceeCCCCCcccccccchhhhccC
Q 014393 383 YVACPKCKKHFCLECDIYIHESL 405 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~l 405 (425)
.|+|+.|+..|=..-++-.|...
T Consensus 42 ~~~C~~C~~~f~~~~~L~~H~~~ 64 (72)
T 1x6e_A 42 PYKCLECGKAFSQNSGLINHQRI 64 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHh
Confidence 46666666666555555555433
No 263
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=43.60 E-value=6.6 Score=28.72 Aligned_cols=48 Identities=15% Similarity=0.346 Sum_probs=34.5
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
...|..|...+.+ ..+.=.-|++. ||.+|..-+.+.-..||.|-....
T Consensus 7 ~~~C~IC~~~~~~------~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 7 LKPCSLCEKRPRD------GNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GSBCTTTSSSBSC------EEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred CCCCcccCCcCCC------eEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 4579999854432 12222468887 999999988877789999976543
No 264
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=43.58 E-value=8.1 Score=29.33 Aligned_cols=27 Identities=26% Similarity=0.717 Sum_probs=21.1
Q ss_pred EcCCCCcccc-----CCCCCCCCCCceecCch
Q 014393 306 TCPRCKARVC-----ELPTDCRICGLQLVSSP 332 (425)
Q Consensus 306 ~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~p 332 (425)
.||.|..+.- ..++.|..||.+|.-++
T Consensus 9 KCp~C~niq~VFShA~tvV~C~~Cg~~L~~PT 40 (66)
T 1qxf_A 9 KCPDCEHEQVIFDHPSTIVKCIICGRTVAEPT 40 (66)
T ss_dssp ECTTTCCEEEEESSCSSCEECSSSCCEEEECC
T ss_pred ECCCCCCceEEEecCceEEEcccCCCEEeecC
Confidence 5999988654 46689999999987553
No 265
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=43.58 E-value=6.1 Score=29.33 Aligned_cols=18 Identities=33% Similarity=0.728 Sum_probs=13.5
Q ss_pred CccccCeEEcCCCCcccc
Q 014393 298 EVKVGVGYTCPRCKARVC 315 (425)
Q Consensus 298 ~~~~~~Gy~Cp~C~s~~C 315 (425)
.+...+.|.||+|+..||
T Consensus 24 ~~~~~~~y~C~~C~~~FC 41 (59)
T 1z60_A 24 ELKDQHVYVCAVCQNVFC 41 (59)
T ss_dssp ECTTSEEECCTTTTCCBC
T ss_pred ccCCCccEECCccCcCcc
Confidence 333442499999999999
No 266
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=43.10 E-value=13 Score=28.78 Aligned_cols=52 Identities=4% Similarity=-0.228 Sum_probs=34.8
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCCCCCCCCCCccc
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIV 421 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~~ 421 (425)
..-.|.-|+..|.++ . ...|++.||..|=.-.-+.-..||.|........++
T Consensus 13 ~~~~CpI~~~~m~dP-------V-~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~ 64 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDP-------V-RLPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLE 64 (85)
T ss_dssp TTTBCTTTCSBCSSE-------E-ECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCE
T ss_pred hheECcccCchhcCC-------e-ECCCCCEECHHHHHHHHhcCCCCCCCcCCCChHhcc
Confidence 355799998777654 2 234999999999543333457899998755443443
No 267
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=43.00 E-value=32 Score=32.37 Aligned_cols=62 Identities=6% Similarity=0.073 Sum_probs=30.3
Q ss_pred eeCCCCCHHHHHHHHhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCC
Q 014393 145 LTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESK 219 (425)
Q Consensus 145 lspLT~d~~~~i~~L~~~l~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~ 219 (425)
+.||||..... +..+.+|+++|++.++...+-..|+|=++.-+ +.+||....+.++.+.+.+
T Consensus 13 ~~plsG~~a~~------------G~~~~~g~~lAv~~iN~~GGi~Gr~ielv~~D-~~~~p~~a~~~a~~li~~~ 74 (353)
T 4gnr_A 13 NFEESGSLAAY------------GTAEQKGAQLAVDEINAAGGIDGKQIEVVDKD-NKSETAEAASVTTNLVTQS 74 (353)
T ss_dssp EECCSSTTHHH------------HHHHHHHHHHHHHHHHHTTCBTTBEEEEEEEE-CTTCHHHHHHHHHHHHHTS
T ss_pred EeCCcCchhHh------------HHHHHHHHHHHHHHHHhcCCCCCeEEEEEEec-CCCCHHHHHHHHHHHHhhC
Confidence 56788774332 23456666777766665433333444444332 1234443344444444444
No 268
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=42.45 E-value=6.7 Score=32.09 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=24.2
Q ss_pred eecCCccccCeE-EcCCCCccccCCCCCCCCCCcee
Q 014393 294 SCHKEVKVGVGY-TCPRCKARVCELPTDCRICGLQL 328 (425)
Q Consensus 294 ~CH~~~~~~~Gy-~Cp~C~s~~C~lP~~C~~C~l~L 328 (425)
.|+..+...+|| .|+.|.+-|=.. ..||.|+-.|
T Consensus 37 ~Cq~eL~~~g~~~hC~~C~~~f~~~-a~CPdC~q~L 71 (101)
T 2jne_A 37 QCQHVLDQDNGHARCRSCGEFIEMK-ALCPDCHQPL 71 (101)
T ss_dssp SSCSBEEEETTEEEETTTCCEEEEE-EECTTTCSBC
T ss_pred cCCCcceecCCEEECccccchhhcc-ccCcchhhHH
Confidence 477777654455 499999976544 5799998764
No 269
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.35 E-value=7.8 Score=30.62 Aligned_cols=44 Identities=18% Similarity=0.345 Sum_probs=30.6
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchh-hhcc-----CCCCCC--CCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-IHES-----LHNCPG--CES 413 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f-iHe~-----lh~CPg--C~~ 413 (425)
.-.|.-|+..|.++ ..-+.|++.||..|=.- +.+. -..||- |..
T Consensus 7 ~~~CPI~~~~~~dP-------V~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~ 58 (94)
T 2yu4_A 7 GFTCPITKEEMKKP-------VKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSH 58 (94)
T ss_dssp CCBCTTTCSBCSSE-------EEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCC
T ss_pred EeECcCcCchhcCC-------EEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcc
Confidence 45799999887653 33457999999999432 2221 458999 864
No 270
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=42.03 E-value=22 Score=35.56 Aligned_cols=52 Identities=23% Similarity=0.420 Sum_probs=35.6
Q ss_pred CCCCccccccccccCCCCCCCcceeCC--CCCcccccccchhhhcc-----------CCCCCCCCCC
Q 014393 361 RSRSTCFGCQQSLLSSGNKPGLYVACP--KCKKHFCLECDIYIHES-----------LHNCPGCESL 414 (425)
Q Consensus 361 ~~~~~C~~C~~~~~~~~~~~~~~~~C~--~C~~~fC~dCD~fiHe~-----------lh~CPgC~~~ 414 (425)
.+...|.-|...+...+. .....|. +|++.|=..|=.-=-.+ -..||.|...
T Consensus 306 e~~~ECaICys~~l~~g~--lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGE--VPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CSCCSCSSSCCSSCTTCC--CCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred cCCccCcccceeecCCCC--CccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 356789999977764221 2235687 89999999996443333 2579999763
No 271
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=41.89 E-value=12 Score=27.34 Aligned_cols=45 Identities=24% Similarity=0.445 Sum_probs=30.2
Q ss_pred CCccccccccccCCC--------CCCCcceeCCCCCcccccccchhhhccCCC
Q 014393 363 RSTCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.-.|.-|.+.|.... -.....|.|+.|+..|=..-++-.|...|.
T Consensus 18 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~ 70 (77)
T 2cot_A 18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT 70 (77)
T ss_dssp SSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSC
T ss_pred CEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhC
Confidence 346888887775431 012235888888888888878877776663
No 272
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=41.85 E-value=7.8 Score=24.27 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=22.1
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++..|...|.
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~H~ 30 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNVHR 30 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred ceECCCCCcccCCHHHHHHHHHHcC
Confidence 5999999999999989988988775
No 273
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=41.68 E-value=13 Score=30.75 Aligned_cols=24 Identities=21% Similarity=0.468 Sum_probs=19.1
Q ss_pred eEEcCCCCcccc--CCCC-CCCCCCce
Q 014393 304 GYTCPRCKARVC--ELPT-DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C--~lP~-~C~~C~l~ 327 (425)
-|.|..|+..|= +.+. .||.||-.
T Consensus 73 ~~~C~~CG~~~e~~~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 73 ELECKDCSHVFKPNALDYGVCEKCHSK 99 (119)
T ss_dssp EEECSSSSCEECSCCSTTCCCSSSSSC
T ss_pred eEEcCCCCCEEeCCCCCCCcCccccCC
Confidence 789999988765 4567 89999865
No 274
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.40 E-value=6.2 Score=24.13 Aligned_cols=25 Identities=16% Similarity=0.304 Sum_probs=20.3
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|=..-++-.|...|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNRHS 33 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHHSS
T ss_pred CccCCCCCchhCCHHHHHHHHHHhc
Confidence 5999999999988877777776653
No 275
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=41.26 E-value=9.8 Score=24.61 Aligned_cols=29 Identities=24% Similarity=0.433 Sum_probs=20.2
Q ss_pred ceeCCCCCcccccccchhhhccCC------CCCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH------NCPGC 411 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh------~CPgC 411 (425)
.|.|+.|++.|-..-++-.|...| .||.|
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c 44 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS 44 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence 478888888887777777774443 56666
No 276
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.09 E-value=12 Score=23.75 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=21.8
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRIHT 35 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTTTS
T ss_pred CEECCCCCCccCCHHHHHHHHHhcC
Confidence 5899999999999999998987774
No 277
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.89 E-value=19 Score=26.98 Aligned_cols=38 Identities=29% Similarity=0.815 Sum_probs=27.5
Q ss_pred CCcccc--ccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCC
Q 014393 363 RSTCFG--CQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 410 (425)
Q Consensus 363 ~~~C~~--C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPg 410 (425)
...|.. |.+.- -..|.|..|++.||.+ -=+..-|.|++
T Consensus 12 ~~~Cs~~~Ck~~~-------ll~f~C~~C~~~FC~~---HR~~e~H~C~~ 51 (63)
T 1x4v_A 12 TNKCERAGCRQRE-------MMKLTCERCSRNFCIK---HRHPLDHDCSG 51 (63)
T ss_dssp CCCCCSTTCCCCC-------SSCCBCSSSCCBCCHH---HHSTTSSCCCS
T ss_pred CCCCCccCCCCCC-------ccceECCCCCcccCcc---cCCccCCcCCC
Confidence 457888 97431 1358999999999985 33556799986
No 278
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.97 E-value=12 Score=26.56 Aligned_cols=34 Identities=29% Similarity=0.741 Sum_probs=26.4
Q ss_pred eEEcCCCCccc-----------c-CCCCCCC-CCCceecCchhHHhh
Q 014393 304 GYTCPRCKARV-----------C-ELPTDCR-ICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp~C~s~~-----------C-~lP~~C~-~C~l~Lvs~phLars 337 (425)
-|.|+.|+..| + +-|-.|+ .||..+...-+|.+-
T Consensus 10 ~~~C~~C~k~f~~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H 56 (66)
T 2eod_A 10 TQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGH 56 (66)
T ss_dssp EEECSSSCCEEEHHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHH
T ss_pred CeeccccCCccCHHHHHHHHHHcCCcCccCCcccCcccccHHHHHHH
Confidence 68899997654 2 4567899 999999888888764
No 279
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=39.74 E-value=16 Score=26.06 Aligned_cols=34 Identities=38% Similarity=0.853 Sum_probs=25.9
Q ss_pred eEEcC--CCCcccc--------------CCCCCCCCCCceecCchhHHhh
Q 014393 304 GYTCP--RCKARVC--------------ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 304 Gy~Cp--~C~s~~C--------------~lP~~C~~C~l~Lvs~phLars 337 (425)
-|.|+ .|+..|- +-|-.|+.||..+.....|.+-
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 68 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHH
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHH
Confidence 68887 5887664 3466899999999888888663
No 280
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=39.71 E-value=9.8 Score=31.42 Aligned_cols=31 Identities=6% Similarity=0.016 Sum_probs=14.4
Q ss_pred CcccccccchhhhccCCCCCCCCCCCCCCcc
Q 014393 390 KKHFCLECDIYIHESLHNCPGCESLRHSNPI 420 (425)
Q Consensus 390 ~~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~ 420 (425)
++.||..|-.-..-....|-+|...+.+..|
T Consensus 54 g~~yC~~cy~~~f~~~~~C~~C~~~I~~~~~ 84 (122)
T 1m3v_A 54 GMILCRNDYIRLFGNSGAGGSGGHMGSGGDV 84 (122)
T ss_dssp TEEECHHHHHHHHCCCCSSSCSSCCSCCEES
T ss_pred CeeecHHHHHHHcCCCCccccCCCCcCchhe
Confidence 4455555543333333356666554444333
No 281
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.46 E-value=12 Score=28.30 Aligned_cols=57 Identities=18% Similarity=0.301 Sum_probs=36.4
Q ss_pred CCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCcceeCCCCCccccccc
Q 014393 320 DCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLEC 397 (425)
Q Consensus 320 ~C~~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dC 397 (425)
.|+.|+..+....+|.+-. ||.- - ....++.|. .|.|+.|+..|=..-
T Consensus 27 ~C~~C~k~f~~~~~L~~H~~~~H~~-~-----------------~~~~~~~c~------------~~~C~~C~k~f~~~~ 76 (95)
T 2ej4_A 27 PKKSCDRTFSTMHELVTHVTMEHVG-G-----------------PEQNNHVCY------------WEECPREGKSFKAKY 76 (95)
T ss_dssp SCCCCCCCCSSHHHHHHHHHHTTTC-C-----------------TTCSCCCCC------------CTTCSSTTCCCSSHH
T ss_pred cccccccccCCHHHHHHHHHHhccC-C-----------------CCCCcccee------------ccCCCCCCcccCCHH
Confidence 5889999999999998753 3531 0 011233342 266888888887777
Q ss_pred chhhhccCC
Q 014393 398 DIYIHESLH 406 (425)
Q Consensus 398 D~fiHe~lh 406 (425)
.+-.|...|
T Consensus 77 ~L~~H~~~H 85 (95)
T 2ej4_A 77 KLVNHIRVH 85 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 777665443
No 282
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=39.32 E-value=7 Score=23.48 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=20.5
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|=..-++-.|...|.
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~ 31 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIREVH 31 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred CeECCCCcchhCCHHHHHHHHHHHc
Confidence 5999999999988888888876653
No 283
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.16 E-value=5.2 Score=24.36 Aligned_cols=24 Identities=21% Similarity=0.563 Sum_probs=19.6
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|=..-++-.|...|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRKH 32 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHHc
Confidence 599999999998888777776554
No 284
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.74 E-value=10 Score=24.56 Aligned_cols=25 Identities=24% Similarity=0.541 Sum_probs=22.1
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRGIHT 36 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHTTTT
T ss_pred CeECCCCCcccCCHHHHHHHHHhhC
Confidence 5899999999999999999987774
No 285
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.73 E-value=11 Score=24.43 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=22.3
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRVHS 36 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGGSC
T ss_pred CcCCCCcCchhCCHHHHHHHHHHhC
Confidence 5899999999999999999988774
No 286
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=38.71 E-value=15 Score=22.13 Aligned_cols=20 Identities=25% Similarity=0.544 Sum_probs=16.2
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.||..+....+|.+-
T Consensus 2 p~~C~~C~k~F~~~~~L~~H 21 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKH 21 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHH
T ss_pred cccCCCCCchhCCHHHHHHH
Confidence 45788899999998888764
No 287
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.69 E-value=10 Score=23.84 Aligned_cols=25 Identities=24% Similarity=0.562 Sum_probs=21.6
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRVHT 35 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGGTS
T ss_pred CeeCCCccchhCCHHHHHHHHHHhC
Confidence 5899999999999988888887763
No 288
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=38.48 E-value=24 Score=23.88 Aligned_cols=20 Identities=30% Similarity=0.619 Sum_probs=15.0
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H 31 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGH 31 (54)
T ss_dssp CEECSSSCCEESSHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHH
Confidence 33566788888888888775
No 289
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=38.44 E-value=11 Score=32.87 Aligned_cols=25 Identities=24% Similarity=0.643 Sum_probs=13.6
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcc
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKH 392 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~ 392 (425)
..|.+|...|... ...-.||.|++.
T Consensus 133 y~C~~Cg~~~~~~----~~~~~Cp~CG~~ 157 (165)
T 2lcq_A 133 YVCIGCGRKFSTL----PPGGVCPDCGSK 157 (165)
T ss_dssp EEESSSCCEESSC----CGGGBCTTTCCB
T ss_pred EECCCCCCcccCC----CCCCcCCCCCCc
Confidence 3577777666421 112257777653
No 290
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=38.43 E-value=7 Score=22.17 Aligned_cols=24 Identities=21% Similarity=0.515 Sum_probs=19.7
Q ss_pred ceeCC--CCCcccccccchhhhccCC
Q 014393 383 YVACP--KCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~--~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+ .|++.|-..=++-.|...|
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~H 27 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKIH 27 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence 38899 9999998888888887665
No 291
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=38.33 E-value=7.4 Score=32.62 Aligned_cols=51 Identities=18% Similarity=0.299 Sum_probs=0.4
Q ss_pred CCccccccccccCCCC----------CCCcceeCCCCCcccccccchhhhccCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGN----------KPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 413 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~----------~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~ 413 (425)
...|.-|...|..+.. .+.....-+.|++.|+.+|=.---.+-..||-|-.
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~ 108 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 108 (117)
T ss_dssp C------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCC
Confidence 4579999988854210 00111122479999999995544445578999964
No 292
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=38.26 E-value=47 Score=26.21 Aligned_cols=57 Identities=18% Similarity=0.138 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCC-C-CCccCHHHHHHHHHhCCcEEEEEEecc
Q 014393 170 SLQNALDLVQGLLSQIPSYGHREVLILY-SALS-T-CDPGDIMETIQKCKESKIRCSVIGLSA 229 (425)
Q Consensus 170 sL~~AL~~A~~~L~~~p~~~sreILVI~-~s~~-t-~dp~~i~~ti~~akk~~I~V~vIglg~ 229 (425)
.+.++|..|.++++..| .-+|.|++ |+.. . ....++.+.++.+++.||++.+|+-..
T Consensus 12 ~~~~al~~~~n~~~~~~---~~~v~vv~~g~gv~~~~~~~~~~~~i~~l~~~gV~~~~C~~s~ 71 (108)
T 2pd2_A 12 KVPQALRSVINLYNDIK---DAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNILIVGCENSI 71 (108)
T ss_dssp GHHHHHHHHHHHHHHST---TCEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEEHHHH
T ss_pred HHHHHHHHHHHHHhhCC---CCeEEEEEcChHHHHHHcCchHHHHHHHHHHCcCEEEecHHHH
Confidence 46678888888887643 23565555 4221 1 112357788999999999999998753
No 293
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.12 E-value=18 Score=23.27 Aligned_cols=29 Identities=17% Similarity=0.371 Sum_probs=20.6
Q ss_pred ceeCCCCCcccccccchhhhccC------CCCCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESL------HNCPGC 411 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~l------h~CPgC 411 (425)
.|.|+.|++.|=..-++-.|... +.|+.|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 48888888888887777777443 356555
No 294
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.90 E-value=4.4 Score=26.63 Aligned_cols=23 Identities=26% Similarity=0.401 Sum_probs=15.6
Q ss_pred ceeCCCCCcccccccchhhhccC
Q 014393 383 YVACPKCKKHFCLECDIYIHESL 405 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~l 405 (425)
.|.|+.|++.|=..-++-.|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHHHH
Confidence 47777777777777666666443
No 295
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.89 E-value=14 Score=23.81 Aligned_cols=22 Identities=23% Similarity=0.466 Sum_probs=17.0
Q ss_pred ceeCCCCCcccccccchhhhcc
Q 014393 383 YVACPKCKKHFCLECDIYIHES 404 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~ 404 (425)
.|.|+.|++.|=..-++-.|..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQK 33 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHHH
Confidence 4888888888888777777743
No 296
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.54 E-value=12 Score=24.24 Aligned_cols=25 Identities=24% Similarity=0.543 Sum_probs=22.2
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRRIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGGTS
T ss_pred CEECCCCChhhCChHHHHHHHHhcC
Confidence 5999999999999999999987774
No 297
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.37 E-value=16 Score=23.66 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=17.2
Q ss_pred ceeCCCCCcccccccchhhhccC
Q 014393 383 YVACPKCKKHFCLECDIYIHESL 405 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~l 405 (425)
.|.|+.|+..|=..=++-.|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CEEccccCcccCCHHHHHHHHHH
Confidence 48888888888877777777443
No 298
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=37.34 E-value=24 Score=28.17 Aligned_cols=52 Identities=8% Similarity=-0.283 Sum_probs=34.6
Q ss_pred CCccccccccccCCCCCCCcceeCCCCC-cccccccchhhhccCCCCCCCCCCCCCCcccc
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCK-KHFCLECDIYIHESLHNCPGCESLRHSNPIVA 422 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~-~~fC~dCD~fiHe~lh~CPgC~~~~~~~~~~~ 422 (425)
.-.|.-|+..|.++. ...|+ +.||..|=.-.-+.-..||.|........++.
T Consensus 22 ~~~CpI~~~~m~dPV--------~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~p 74 (98)
T 1wgm_A 22 EFLDPIMSTLMCDPV--------VLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRP 74 (98)
T ss_dssp TTBCTTTCSBCSSEE--------ECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEE
T ss_pred hcCCcCccccccCCe--------ECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhceE
Confidence 457999987776541 34688 99999994433333578999987554444433
No 299
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.29 E-value=18 Score=23.35 Aligned_cols=23 Identities=22% Similarity=0.454 Sum_probs=17.2
Q ss_pred ceeCCCCCcccccccchhhhccC
Q 014393 383 YVACPKCKKHFCLECDIYIHESL 405 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~l 405 (425)
.|.|+.|++.|=..-++-.|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRRV 34 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTHH
T ss_pred CeECCcCCchhCCHHHHHHHHHh
Confidence 48888888888887777777543
No 300
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=37.27 E-value=15 Score=27.45 Aligned_cols=41 Identities=20% Similarity=0.502 Sum_probs=29.1
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
..|.-|...+.++ .+ -.|++. ||.+|-.- +..||-|-....
T Consensus 25 ~~C~iC~~~~~~~------~~--~pCgH~~~C~~C~~~----~~~CP~Cr~~i~ 66 (74)
T 4ic3_A 25 KLCKICMDRNIAI------VF--VPCGHLVTCKQCAEA----VDKCPMCYTVIT 66 (74)
T ss_dssp TBCTTTSSSBCCE------EE--ETTCCBCCCHHHHTT----CSBCTTTCCBCS
T ss_pred CCCCCCCCCCCCE------EE--cCCCChhHHHHhhhc----CccCCCcCcCcc
Confidence 4799998665432 22 269999 99999553 389999976443
No 301
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.16 E-value=16 Score=23.60 Aligned_cols=24 Identities=25% Similarity=0.495 Sum_probs=17.8
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVLH 35 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CEEccccChhhCCHHHHHHHHHHh
Confidence 488888888888877777775443
No 302
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.15 E-value=16 Score=23.58 Aligned_cols=29 Identities=17% Similarity=0.328 Sum_probs=20.7
Q ss_pred ceeCCCCCcccccccchhhhccC------CCCCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESL------HNCPGC 411 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~l------h~CPgC 411 (425)
.|.|+.|++.|=..=++-.|... +.|+.|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 58888898888887777766443 456655
No 303
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.15 E-value=16 Score=23.62 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=18.1
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRTH 35 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHH
T ss_pred CcCCCCCCcccCcHHHHHHHHHHc
Confidence 488888888888887777775443
No 304
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.11 E-value=15 Score=23.08 Aligned_cols=25 Identities=28% Similarity=0.654 Sum_probs=21.8
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|=..-++-.|...|.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERIHT 34 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGGCC
T ss_pred CeECCCCCCCcCCHHHHHHHHHHhC
Confidence 5999999999999888888887774
No 305
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=37.06 E-value=25 Score=22.06 Aligned_cols=25 Identities=20% Similarity=0.514 Sum_probs=21.2
Q ss_pred eEEcCCCCccccCCCCCCCCCCcee
Q 014393 304 GYTCPRCKARVCELPTDCRICGLQL 328 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP~~C~~C~l~L 328 (425)
.+.||+|-.+.=..-..|.+|+..+
T Consensus 6 ~W~C~~CTf~N~~~~~~Ce~C~~~r 30 (31)
T 1nj3_A 6 MWACQHCTFMNQPGTGHCEMCSLPR 30 (31)
T ss_dssp CEECSSSCCEECSSCSSCSSSCCCC
T ss_pred cccCCcccccCCCCCCccCCcCCCC
Confidence 7899999988877778999999764
No 306
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=36.72 E-value=27 Score=27.49 Aligned_cols=77 Identities=22% Similarity=0.514 Sum_probs=51.4
Q ss_pred CCCCC--CCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCC--------CCCCcceeC
Q 014393 318 PTDCR--ICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSG--------NKPGLYVAC 386 (425)
Q Consensus 318 P~~C~--~C~l~Lvs~phLarsyh-hlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~--------~~~~~~~~C 386 (425)
|-.|+ .|+..+.+...|.+-.. | ... .-.|..|.+.|.... -.....|.|
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h--~~~-----------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C 65 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHTH--GPR-----------------VHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGGG--SCC-----------------CEECTTTCCEESSHHHHHHHGGGTSCCCCEEC
T ss_pred cccCCCCCCcCccCCHHHHHHHHHHc--CCC-----------------CeECCCCCchhCCHHHHHHHHHHcCCCCCeeC
Confidence 44687 89999999988877532 2 111 235888988886431 012335899
Q ss_pred CC--CCcccccccchhhhcc------CCCCC--CCCC
Q 014393 387 PK--CKKHFCLECDIYIHES------LHNCP--GCES 413 (425)
Q Consensus 387 ~~--C~~~fC~dCD~fiHe~------lh~CP--gC~~ 413 (425)
+. |+..|=..=++-.|.. ...|| +|..
T Consensus 66 ~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~ 102 (124)
T 1ubd_C 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 102 (124)
T ss_dssp CSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCC
T ss_pred CCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCC
Confidence 74 9999987777777643 45886 5864
No 307
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=36.72 E-value=11 Score=29.55 Aligned_cols=47 Identities=26% Similarity=0.564 Sum_probs=30.8
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccch-hhh----cc---CCCCCC--CCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIH----ES---LHNCPG--CESL 414 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~-fiH----e~---lh~CPg--C~~~ 414 (425)
...|.-|.-.++.+ ..+.-..|++.||.+|=. |+. |. --.||. |...
T Consensus 5 ~~~C~IC~~~~~~~-----~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVE-----QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGG-----GEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccc-----cceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 44799998766532 234556799999999942 222 21 237999 9765
No 308
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=36.61 E-value=14 Score=27.40 Aligned_cols=35 Identities=23% Similarity=0.582 Sum_probs=23.2
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCccccc-ccchhhhc
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCL-ECDIYIHE 403 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~-dCD~fiHe 403 (425)
...|..|...- .....|.||+|+-.||- .|-. +|.
T Consensus 11 ~~~C~vC~~~~-----~~~akY~CPrC~~rYCSl~C~k-~Hk 46 (59)
T 1x4s_A 11 AGPCGFCPAGE-----VQPARYTCPRCNAPYCSLRCYR-THG 46 (59)
T ss_dssp CEEECSSCTTC-----CEEECEECTTTCCEESSHHHHH-HHC
T ss_pred CCcCcCCCCCc-----CCCccccCcCCCCCccChHHHH-HHh
Confidence 45899997410 01135999999999996 5544 453
No 309
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=36.54 E-value=9.2 Score=27.44 Aligned_cols=30 Identities=23% Similarity=0.652 Sum_probs=23.2
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcc-cccccch
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDI 399 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCD~ 399 (425)
...|-+|.+.+ ..||.|..|... +|..|-.
T Consensus 6 ~~~Cd~C~~~i-------g~R~~C~~C~dyDLC~~C~~ 36 (52)
T 1tot_A 6 VYTCNECKHHV-------ETRWHCTVCEDYDLCINCYN 36 (52)
T ss_dssp CEEETTTTEEE-------SSEEEESSSSSCEECHHHHH
T ss_pred EEECCCCCCCC-------cceEEcCCCCCchhHHHHHh
Confidence 35799998763 148999999765 9999954
No 310
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=36.36 E-value=13 Score=28.88 Aligned_cols=42 Identities=24% Similarity=0.429 Sum_probs=25.0
Q ss_pred ccccccccccCCC--------CCCCcceeCCCCCcccccccchhhh-ccCC
Q 014393 365 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIH-ESLH 406 (425)
Q Consensus 365 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCD~fiH-e~lh 406 (425)
.|.-|.+.|.... -.....|.|+.|++.|=..-++-.| ...|
T Consensus 30 ~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H 80 (85)
T 2lv2_A 30 LCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH 80 (85)
T ss_dssp ECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred ECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence 5777777775431 0122357777777777766666666 3444
No 311
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=36.28 E-value=10 Score=25.29 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=22.3
Q ss_pred ceeCCCCCcccccccchhhhcc-CCC
Q 014393 383 YVACPKCKKHFCLECDIYIHES-LHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~-lh~ 407 (425)
.|.|+.|++.|-..-++-.|.. .|.
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~ 32 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHL 32 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcC
Confidence 5999999999999999999987 774
No 312
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.99 E-value=20 Score=23.04 Aligned_cols=24 Identities=25% Similarity=0.578 Sum_probs=18.1
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CeeCCCCChhhCCHHHHHHHHHHh
Confidence 488888888888887777775443
No 313
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.88 E-value=17 Score=23.49 Aligned_cols=25 Identities=32% Similarity=0.620 Sum_probs=21.4
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHERIHT 36 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHTTCC
T ss_pred CEECcCCCCcCCCHHHHHHHHHHcC
Confidence 5999999999999988888877664
No 314
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.87 E-value=12 Score=24.30 Aligned_cols=25 Identities=28% Similarity=0.688 Sum_probs=22.1
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKIHT 36 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTTTS
T ss_pred CEECCccCcccCCHHHHHHHHHHhC
Confidence 5899999999999999999987774
No 315
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=35.82 E-value=13 Score=27.26 Aligned_cols=48 Identities=19% Similarity=0.375 Sum_probs=34.3
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
...|..|...+.+ ..+.---|++. ||.+|..-+-+.-..||.|-....
T Consensus 8 ~~~C~IC~~~~~~------~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 8 IEPCVICQGRPKN------GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GSCCTTTSSSCSC------EEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred cCCCCcCCCCCCC------EEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 4579999855432 12322258998 899999988887788999976543
No 316
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=35.19 E-value=6.7 Score=33.62 Aligned_cols=43 Identities=23% Similarity=0.614 Sum_probs=30.3
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhc-cCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCES 413 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe-~lh~CPgC~~ 413 (425)
.-.|.-|+..|..+ .+ ..|+..||..|=.-.-. .-..||-|..
T Consensus 31 ~~~C~IC~~~~~~p-------v~-~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~ 74 (141)
T 3knv_A 31 KYLCSACRNVLRRP-------FQ-AQCGHRYCSFCLASILSSGPQNCAACVH 74 (141)
T ss_dssp GGBCTTTCSBCSSE-------EE-CTTSCEEEHHHHHHHGGGSCEECHHHHH
T ss_pred CcCCCCCChhhcCc-------EE-CCCCCccCHHHHHHHHhcCCCCCCCCCC
Confidence 45799999777542 34 37999999999543333 3348999965
No 317
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.18 E-value=10 Score=24.51 Aligned_cols=25 Identities=24% Similarity=0.607 Sum_probs=21.8
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQRIHT 36 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHTTTS
T ss_pred CccCCCCCCccCChHHHHHHHHHhC
Confidence 5999999999999999998977763
No 318
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.91 E-value=13 Score=24.15 Aligned_cols=25 Identities=24% Similarity=0.582 Sum_probs=21.8
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQRVHT 36 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHTTTS
T ss_pred CeECCCCCcccCCHHHHHHHHHHcC
Confidence 5899999999999999999987764
No 319
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=34.86 E-value=18 Score=41.13 Aligned_cols=26 Identities=38% Similarity=0.991 Sum_probs=20.0
Q ss_pred eEEcCCCCc-c---------ccCCC-CCCCCCCceec
Q 014393 304 GYTCPRCKA-R---------VCELP-TDCRICGLQLV 329 (425)
Q Consensus 304 Gy~Cp~C~s-~---------~C~lP-~~C~~C~l~Lv 329 (425)
.|+||.|+- - =+.|| -.||.||..|.
T Consensus 502 hy~c~~c~~~ef~~~~~~~~g~dlp~k~cp~cg~~~~ 538 (1041)
T 3f2b_A 502 HYVCPNCKHSEFFNDGSVGSGFDLPDKNCPRCGTKYK 538 (1041)
T ss_dssp EEECTTTCCEEECCSSCCSCGGGSCCCBCTTTCCBCE
T ss_pred cccCccccccccccccccccccCCccccCcccccccc
Confidence 899999983 2 24677 48999999864
No 320
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.83 E-value=11 Score=24.45 Aligned_cols=25 Identities=24% Similarity=0.643 Sum_probs=21.8
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRIHR 36 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGGGC
T ss_pred CCCCCCCCcccCCHHHHHHHHhHhC
Confidence 5999999999999999988877764
No 321
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.53 E-value=20 Score=22.96 Aligned_cols=24 Identities=33% Similarity=0.595 Sum_probs=16.5
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERLH 35 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHHC
T ss_pred CeECCCCCCccCchHHHHHHHHhc
Confidence 477777877777777766665444
No 322
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.52 E-value=14 Score=23.95 Aligned_cols=25 Identities=28% Similarity=0.563 Sum_probs=22.0
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSVHS 36 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTTTT
T ss_pred ccCCCCCCcccCcHHHHHHHHHhcC
Confidence 5899999999999999999987774
No 323
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=34.50 E-value=14 Score=27.80 Aligned_cols=27 Identities=30% Similarity=0.651 Sum_probs=20.4
Q ss_pred EcCCCCcccc-----CCCCCCCCCCceecCch
Q 014393 306 TCPRCKARVC-----ELPTDCRICGLQLVSSP 332 (425)
Q Consensus 306 ~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~p 332 (425)
.||-|..+.- ..++.|..||.+|.-++
T Consensus 17 kCp~C~~~q~VFSha~t~V~C~~Cgt~L~~PT 48 (63)
T 3j20_W 17 KCIDCGNEQIVFSHPATKVRCLICGATLVEPT 48 (63)
T ss_dssp ECSSSCCEEEEESSCSSCEECSSSCCEEEECC
T ss_pred ECCCCCCeeEEEecCCeEEEccCcCCEEecCC
Confidence 5899987654 45679999999987543
No 324
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=34.43 E-value=56 Score=30.43 Aligned_cols=56 Identities=25% Similarity=0.436 Sum_probs=39.7
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecch
Q 014393 165 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE 230 (425)
Q Consensus 165 ~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e 230 (425)
..|+-.|+.|+ ....+.| .-.+||+-||+- .|.|.++++.+|++||+|-.+-+...
T Consensus 127 ~vge~~l~~av----~av~~lp---r~~~lvlags~m---gg~i~~~v~~~~~~~i~vi~l~m~gs 182 (223)
T 1y7p_A 127 VVGEEEIAEAV----KAVSRLH---RAEVLVLAGGIM---GGKITEEVKKLRKSGIRVISLSMFGS 182 (223)
T ss_dssp CCSHHHHHHHH----HHGGGST---TEEEEEEESSBC---CTHHHHHHHHHGGGTCEEEEESCBSS
T ss_pred ecCHHHHHHHH----HHHhhcc---ccceeeEecccc---cchHHHHHHHHHHCCCeEEEecCCCC
Confidence 35766665554 4555554 224899988875 37899999999999998877666543
No 325
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.39 E-value=8.5 Score=25.06 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=19.1
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CEECCcCCchhCCHHHHHHHHHHh
Confidence 588999999998888887776554
No 326
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.33 E-value=11 Score=24.30 Aligned_cols=25 Identities=28% Similarity=0.559 Sum_probs=21.5
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERTHA 36 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGGS
T ss_pred CeECCCCCcccCchHHHHHHHhHhc
Confidence 5999999999998888888877664
No 327
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.20 E-value=12 Score=24.10 Aligned_cols=25 Identities=24% Similarity=0.677 Sum_probs=22.0
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRTHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHTSC
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhC
Confidence 5999999999999999999987764
No 328
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=34.12 E-value=23 Score=29.25 Aligned_cols=27 Identities=22% Similarity=0.454 Sum_probs=19.1
Q ss_pred cceeCCCCCcccccccchhhhccCC-CCCCCCCC
Q 014393 382 LYVACPKCKKHFCLECDIYIHESLH-NCPGCESL 414 (425)
Q Consensus 382 ~~~~C~~C~~~fC~dCD~fiHe~lh-~CPgC~~~ 414 (425)
..|+|..|+..|=.+ +-.- .||.|.+.
T Consensus 72 ~~~~C~~CG~~~e~~------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPN------ALDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSC------CSTTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCC------CCCCCcCccccCC
Confidence 468888888887663 3345 68888764
No 329
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=34.04 E-value=19 Score=25.56 Aligned_cols=25 Identities=32% Similarity=0.935 Sum_probs=18.2
Q ss_pred eEEcCCCCccccC-----CC-CCCCCCCcee
Q 014393 304 GYTCPRCKARVCE-----LP-TDCRICGLQL 328 (425)
Q Consensus 304 Gy~Cp~C~s~~C~-----lP-~~C~~C~l~L 328 (425)
-|.|=+|+.-|-. || ..||.||-..
T Consensus 3 iY~C~rCg~~fs~~el~~lP~IrCpyCGyri 33 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKVLPGVRCPYCGYKI 33 (48)
T ss_dssp --CCCCTTTTCCCCCSCCCSSSCCTTTCCSC
T ss_pred EEEeeccCCCccHHHHhhCCCcccCccCcEE
Confidence 4889999988774 55 5899999654
No 330
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.80 E-value=18 Score=23.33 Aligned_cols=23 Identities=22% Similarity=0.446 Sum_probs=16.7
Q ss_pred ceeCCCCCcccccccchhhhccC
Q 014393 383 YVACPKCKKHFCLECDIYIHESL 405 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~l 405 (425)
.|.|+.|++.|=..-++-.|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT 34 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCchHHHHHHHHH
Confidence 47888888888777777766443
No 331
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.40 E-value=11 Score=24.07 Aligned_cols=25 Identities=28% Similarity=0.517 Sum_probs=21.2
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERTHA 36 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHHCC
T ss_pred CeECCCCCchhCCHHHHHHHhHhcC
Confidence 5999999999999888888876663
No 332
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=33.18 E-value=22 Score=28.32 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=21.1
Q ss_pred EEcCCCCcccc-----CCCCCCCCCCceecCc
Q 014393 305 YTCPRCKARVC-----ELPTDCRICGLQLVSS 331 (425)
Q Consensus 305 y~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~ 331 (425)
-.||-|..+.- ..++.|..||.+|.-+
T Consensus 37 VkCp~C~~~~~VFShA~t~V~C~~CgtvL~~P 68 (86)
T 3iz6_X 37 VKCQGCFNITTVFSHSQTVVVCPGCQTVLCQP 68 (86)
T ss_dssp EECTTTCCEEEEETTCSSCCCCSSSCCCCSCC
T ss_pred EECCCCCCeeEEEecCCcEEEccCCCCEeecC
Confidence 36999998754 4668999999998644
No 333
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.12 E-value=9.7 Score=24.29 Aligned_cols=25 Identities=24% Similarity=0.651 Sum_probs=21.6
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRTHT 36 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHTT
T ss_pred CeECCCCCcccCCHhHHHHHHHHhC
Confidence 5999999999999999988877664
No 334
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=33.11 E-value=14 Score=21.46 Aligned_cols=24 Identities=25% Similarity=0.528 Sum_probs=20.2
Q ss_pred eeCC--CCCcccccccchhhhccCCC
Q 014393 384 VACP--KCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 384 ~~C~--~C~~~fC~dCD~fiHe~lh~ 407 (425)
|.|+ .|+..|=..-++-.|...|.
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~H~ 28 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRTHT 28 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred cCCcCCCCCcccCCHhHHHHHHHHhc
Confidence 7897 89999988888888887774
No 335
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.76 E-value=13 Score=23.75 Aligned_cols=25 Identities=28% Similarity=0.588 Sum_probs=21.5
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQKTHA 36 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGGGGC
T ss_pred CeECCCCCCccCCHHHHHHHHHHcC
Confidence 5999999999999888888877764
No 336
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.71 E-value=13 Score=24.08 Aligned_cols=25 Identities=24% Similarity=0.526 Sum_probs=21.9
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTTTS
T ss_pred CeECCCCCcccCChhHHHHHhHhcC
Confidence 5899999999999999999987774
No 337
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.67 E-value=20 Score=25.94 Aligned_cols=54 Identities=22% Similarity=0.424 Sum_probs=38.5
Q ss_pred CCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCcceeCCCCCccc
Q 014393 316 ELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHF 393 (425)
Q Consensus 316 ~lP~~C~~C~l~Lvs~phLarsy--hhlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~f 393 (425)
+-|-.|+.|+..+....+|.+-. +|.-. ...|.|+.|+..|
T Consensus 13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~-------------------------------------~~~~~C~~C~~~f 55 (77)
T 2ct1_A 13 EKPYECYICHARFTQSGTMKMHILQKHTEN-------------------------------------VAKFHCPHCDTVI 55 (77)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHHHHSSSS-------------------------------------CSSEECSSSSCEE
T ss_pred CCCeECCCcCchhCCHHHHHHHHHHhcCCC-------------------------------------CCccCCCCCCCcc
Confidence 45678999999999999998763 44210 0137788888888
Q ss_pred ccccchhhhccCC
Q 014393 394 CLECDIYIHESLH 406 (425)
Q Consensus 394 C~dCD~fiHe~lh 406 (425)
-..-++..|...|
T Consensus 56 ~~~~~L~~H~~~~ 68 (77)
T 2ct1_A 56 ARKSDLGVHLRKQ 68 (77)
T ss_dssp SSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHh
Confidence 8777777776543
No 338
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.64 E-value=10 Score=23.48 Aligned_cols=24 Identities=17% Similarity=0.232 Sum_probs=19.9
Q ss_pred ceeCCCCCcccccccchhhh-ccCC
Q 014393 383 YVACPKCKKHFCLECDIYIH-ESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiH-e~lh 406 (425)
.|.|+.|+..|-..-++-.| ...|
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H 33 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKH 33 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHT
T ss_pred CeECCCCCcccCCHHHHHHHHHHHc
Confidence 59999999999888887777 6555
No 339
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.63 E-value=15 Score=23.64 Aligned_cols=25 Identities=24% Similarity=0.596 Sum_probs=21.9
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQRIHT 36 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHHcC
Confidence 5999999999999999999987764
No 340
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.59 E-value=13 Score=24.05 Aligned_cols=25 Identities=24% Similarity=0.588 Sum_probs=21.6
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRVHT 36 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGGGT
T ss_pred CCCCCCCCcccCCHHHHHHHHHhcC
Confidence 5899999999999999888877663
No 341
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=32.59 E-value=25 Score=27.89 Aligned_cols=39 Identities=38% Similarity=0.805 Sum_probs=27.9
Q ss_pred CCCcccc--ccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCC
Q 014393 362 SRSTCFG--CQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 410 (425)
Q Consensus 362 ~~~~C~~--C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPg 410 (425)
....|.. |.+.-. ..|.|..|+..||.+ -=|..-|.||+
T Consensus 24 ~~~~C~~~~Ck~~~~-------l~f~C~~C~~~FC~~---HR~~e~H~C~~ 64 (86)
T 1wfe_A 24 KSYSCSFKGCTDVEL-------VAVICPYCEKNFCLR---HRHQSDHDCEK 64 (86)
T ss_dssp CCEECCSTTCCCEES-------SCEECTTTCCEECGG---GCSTGGGTCSS
T ss_pred CCCCCCCcCCCCCCc-------cceECCCCCcccccc---cCCccCCCCCC
Confidence 3457888 974421 358999999999986 22455699987
No 342
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=32.57 E-value=32 Score=26.61 Aligned_cols=38 Identities=32% Similarity=0.628 Sum_probs=27.6
Q ss_pred CCcccc--ccccccCCCCCCCcceeCCCCCcccccccchhhhccCCCCCC
Q 014393 363 RSTCFG--CQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 410 (425)
Q Consensus 363 ~~~C~~--C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPg 410 (425)
...|.. |.+. +-..|.|..|+..||.+ --+-.-|.||+
T Consensus 14 g~~Cs~~~C~~~-------dflpf~C~~C~~~FC~~---HR~~e~H~C~~ 53 (75)
T 1wys_A 14 GQHCQVQHCRQR-------DFLPFVCDGCSGIFCLE---HRSKDSHGCSE 53 (75)
T ss_dssp CCCCSCTTTCCC-------SCCCEECTTTCCEECST---TCSSGGGTCCC
T ss_pred CCCcCcccCCCc-------cceeeECcccCcCcCcc---cCCccccCCCC
Confidence 457887 8633 11359999999999986 34556899986
No 343
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.42 E-value=11 Score=24.00 Aligned_cols=25 Identities=24% Similarity=0.455 Sum_probs=21.6
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKTHS 36 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTTSS
T ss_pred CeeCCCCCCccCCHHHHHHHHHHcC
Confidence 5899999999999988888887763
No 344
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.33 E-value=20 Score=21.43 Aligned_cols=21 Identities=24% Similarity=0.458 Sum_probs=15.4
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 014393 317 LPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLars 337 (425)
-|-.|+.|+..+....+|.+-
T Consensus 8 ~~~~C~~C~k~f~~~~~l~~H 28 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKGTLKSH 28 (36)
T ss_dssp SSCBCTTTCCBCSSHHHHHHH
T ss_pred CCeecCcCCCCcCchHHHHHH
Confidence 355778888888888887653
No 345
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.23 E-value=17 Score=23.46 Aligned_cols=25 Identities=24% Similarity=0.568 Sum_probs=21.5
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVIHT 36 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHTTTC
T ss_pred CeECCcCChhhCCHHHHHHHHHHhC
Confidence 5889999999999889988887774
No 346
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.07 E-value=16 Score=23.70 Aligned_cols=25 Identities=24% Similarity=0.675 Sum_probs=22.0
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRIHT 36 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCcCCcccCCHHHHHHHHHHhC
Confidence 5999999999999999999987774
No 347
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=31.98 E-value=15 Score=29.86 Aligned_cols=29 Identities=34% Similarity=0.931 Sum_probs=22.3
Q ss_pred CCccccccc-cccCCCCCCCcceeCCCCCc-cccccc
Q 014393 363 RSTCFGCQQ-SLLSSGNKPGLYVACPKCKK-HFCLEC 397 (425)
Q Consensus 363 ~~~C~~C~~-~~~~~~~~~~~~~~C~~C~~-~fC~dC 397 (425)
...|-+|.. ++. ..||.|..|.+ .+|.+|
T Consensus 31 gv~Cd~C~~~pI~------G~RykC~~C~d~DLC~~C 61 (98)
T 2dip_A 31 GIPCNNCKQFPIE------GKCYKCTECIEYHLCQEC 61 (98)
T ss_dssp CCCCSSSCCSSCC------SCEEEESSSSSCEEEHHH
T ss_pred CCCCcCCCCCCcc------cCeEECCCCCCccHHHHH
Confidence 368999985 342 25899999965 589999
No 348
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=31.84 E-value=14 Score=21.63 Aligned_cols=25 Identities=28% Similarity=0.557 Sum_probs=20.2
Q ss_pred ceeCC--CCCcccccccchhhhccCCC
Q 014393 383 YVACP--KCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~--~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+ .|++.|=..-++-.|...|.
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~ 29 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKSHQ 29 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence 48898 89999988888888877663
No 349
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.62 E-value=13 Score=24.08 Aligned_cols=25 Identities=24% Similarity=0.537 Sum_probs=21.7
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRVHT 36 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGGGC
T ss_pred CeECCCCCcccCCHHHHHHHHHHcC
Confidence 5899999999999999988887764
No 350
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.48 E-value=19 Score=21.93 Aligned_cols=19 Identities=21% Similarity=0.630 Sum_probs=12.9
Q ss_pred CCCCCCCCceecCc-hhHHh
Q 014393 318 PTDCRICGLQLVSS-PHLAR 336 (425)
Q Consensus 318 P~~C~~C~l~Lvs~-phLar 336 (425)
|-.|+.|+..+... .+|.+
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~ 28 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQR 28 (37)
T ss_dssp CEECSSSSCEECSSCHHHHH
T ss_pred CeECCCCChhhccCHHHHHH
Confidence 34566677788777 77765
No 351
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=31.25 E-value=2.2e+02 Score=23.41 Aligned_cols=76 Identities=24% Similarity=0.230 Sum_probs=47.3
Q ss_pred EeeCCCCCHHHHHHHHhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEE
Q 014393 144 CLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCS 223 (425)
Q Consensus 144 ~lspLT~d~~~~i~~L~~~l~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~ 223 (425)
++...+.|...+.+.|.+.+ +.|-..+++.| |||=++... +..++...++.+++.|+++
T Consensus 19 vl~l~~~d~~~l~~~L~~ki------------~~aP~FF~~aP------VVlDl~~l~--~~~dl~~L~~~l~~~gl~~- 77 (120)
T 3ghf_A 19 VVHLHEAEPEVIRQALEDKI------------AQAPAFLKHAP------VVINVSGLE--SPVNWPELHKIVTSTGLRI- 77 (120)
T ss_dssp EEEEESCCHHHHHHHHHHHH------------HHSHHHHTTCE------EEEEEEECC--SSCCHHHHHHHHHTTTCEE-
T ss_pred EEEeCCCCHHHHHHHHHHHH------------HhChHhhCCCc------EEEEccccC--ChHHHHHHHHHHHHcCCEE-
Confidence 34455788888888887653 22333454432 444456554 3467888899999999877
Q ss_pred EEEecc-hHHHHHHHHHhh
Q 014393 224 VIGLSA-EMFICKHLCQDT 241 (425)
Q Consensus 224 vIglg~-e~~iLk~iA~~T 241 (425)
|||.. ....+++.|...
T Consensus 78 -vGV~g~~~~~~~~~a~~~ 95 (120)
T 3ghf_A 78 -IGVSGCKDASLKVEIDRM 95 (120)
T ss_dssp -EEEESCCCHHHHHHHHHH
T ss_pred -EEEeCCCcHHHHHHHHHC
Confidence 67754 334456666554
No 352
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=31.25 E-value=46 Score=27.20 Aligned_cols=70 Identities=16% Similarity=0.335 Sum_probs=42.3
Q ss_pred CCCCCCC--CCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCcccc--ccccccCCCC---------CCCc
Q 014393 317 LPTDCRI--CGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFG--CQQSLLSSGN---------KPGL 382 (425)
Q Consensus 317 lP~~C~~--C~l~Lvs~phLarsyh-hlfp~~~f~~~~~~~~~~~~~~~~~~C~~--C~~~~~~~~~---------~~~~ 382 (425)
-|-.|++ |+..+.+...|.+-.- |. .. ..-.|.- |.+.|..... ....
T Consensus 66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~ 127 (155)
T 2gli_A 66 KPHKCTFEGCRKSYSRLENLKTHLRSHT-GE-----------------KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127 (155)
T ss_dssp CCCCCCSTTCCCCCSSHHHHHHHHHHTT-TC-----------------CCEECCSTTCCCEESSSSTTHHHHHHTTCSCC
T ss_pred CCccCCCCCCCCcccCHHHHHHHHHHcC-CC-----------------CCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence 3556764 8888888887765421 21 11 1235775 8888865431 1233
Q ss_pred ceeCCC--CCcccccccchhhhcc
Q 014393 383 YVACPK--CKKHFCLECDIYIHES 404 (425)
Q Consensus 383 ~~~C~~--C~~~fC~dCD~fiHe~ 404 (425)
.|.|+. |+..|=..=++-.|..
T Consensus 128 ~~~C~~~~C~~~f~~~~~L~~H~~ 151 (155)
T 2gli_A 128 PYVCKLPGCTKRYTDPSSLRKHVK 151 (155)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHH
T ss_pred CeeCCCCCCccccCCHHHHHHHHH
Confidence 599987 9998866655555543
No 353
>1l1s_A Hypothetical protein MTH1491; structural genomics, PSI, protein STRU initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.114.1.1
Probab=31.24 E-value=67 Score=25.65 Aligned_cols=56 Identities=7% Similarity=0.084 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCCC--CCccCHHHHHHHHHhCCcEEEEEEec
Q 014393 170 SLQNALDLVQGLLSQIPSYGHREVLILY-SALST--CDPGDIMETIQKCKESKIRCSVIGLS 228 (425)
Q Consensus 170 sL~~AL~~A~~~L~~~p~~~sreILVI~-~s~~t--~dp~~i~~ti~~akk~~I~V~vIglg 228 (425)
.+..+|..|.++++..| .-+|.|++ |+.-. .+..++.+.++.+.+.||++.+|+-.
T Consensus 17 ~~~~~L~~a~n~~~~~~---~~~i~vv~~G~av~~~~~~~~~~~~i~~L~~~gV~~~~C~~~ 75 (113)
T 1l1s_A 17 RVLLLISNVRNLMADLE---SVRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGVRFCACSNT 75 (113)
T ss_dssp HHHHHHHHHHHHHHHCS---SEEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEEHHH
T ss_pred HHHHHHHHHHHHHHhCC---CCcEEEEEechHHHHHHcCChHHHHHHHHHHCCCEEEecHHH
Confidence 56677888888887653 23455555 43211 12235678899999999999999775
No 354
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.94 E-value=22 Score=22.24 Aligned_cols=21 Identities=19% Similarity=0.436 Sum_probs=16.2
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 014393 317 LPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLars 337 (425)
-|-.|+.|+..+....+|.+-
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H 29 (42)
T 2yte_A 9 KPYSCAECKETFSDNNRLVQH 29 (42)
T ss_dssp CSCBCTTTCCBCSSHHHHHHH
T ss_pred CCeECCCCCCccCCHHHHHHH
Confidence 355677889999988888764
No 355
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=30.91 E-value=21 Score=35.12 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=24.3
Q ss_pred eEEcCCCCccccCC--CCCCCCCCceecCchh
Q 014393 304 GYTCPRCKARVCEL--PTDCRICGLQLVSSPH 333 (425)
Q Consensus 304 Gy~Cp~C~s~~C~l--P~~C~~C~l~Lvs~ph 333 (425)
--.||-|+|+|..- -..|++|++.-|-.+.
T Consensus 278 ~v~Cp~cgA~y~~~~kG~lC~vC~l~~IG~~~ 309 (320)
T 3mkr_B 278 VEKCPLSGACYSPEFKGQICKVTTVTEIGKDV 309 (320)
T ss_dssp CEECTTTCCEECGGGTTSBCTTTSSBBSSCCC
T ss_pred CccCCCCCCeechhhCCCCCCCCcCcccCCcc
Confidence 45899999999964 5799999998776543
No 356
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=30.84 E-value=12 Score=23.61 Aligned_cols=24 Identities=21% Similarity=0.432 Sum_probs=20.4
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|-..=++-.|...|
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~H 34 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQRSC 34 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHT
T ss_pred CeECCCCCcccCCHHHHHHHhhhc
Confidence 599999999999888888887665
No 357
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.64 E-value=21 Score=23.06 Aligned_cols=29 Identities=21% Similarity=0.276 Sum_probs=20.8
Q ss_pred ceeCCCCCcccccccchhhhccCC------CCCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH------NCPGC 411 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh------~CPgC 411 (425)
.|.|+.|++.|=..-++-.|...| .|+-|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 478888888888887777775443 56655
No 358
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.58 E-value=15 Score=23.28 Aligned_cols=25 Identities=28% Similarity=0.517 Sum_probs=21.3
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTRTHT 36 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHTTTC
T ss_pred CeECCCCCCccCCHHHHHHHhhhcC
Confidence 5899999999999988888877763
No 359
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=30.53 E-value=3.2e+02 Score=27.39 Aligned_cols=90 Identities=14% Similarity=0.105 Sum_probs=55.5
Q ss_pred CcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecchH----HHHHHHHHhhC--C-eEEEecCHhHHHHHHHhcC
Q 014393 190 HREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM----FICKHLCQDTG--G-SYSVALDESHFKELIMEHA 262 (425)
Q Consensus 190 sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e~----~iLk~iA~~TG--G-~Y~~~~d~~~L~~lL~~~~ 262 (425)
.++++|..+. ......+..+.+.|+.|-.++.+... ..++++.+..+ + ..+...|..++.+++...-
T Consensus 312 gkrv~i~~~~------~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~~~i~~~~ 385 (458)
T 1mio_B 312 GKKVALLGDP------DEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGDFFDVHQWIKNEG 385 (458)
T ss_dssp TCEEEEEECH------HHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCBHHHHHHHHHHSC
T ss_pred CCEEEEEcCc------hHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcC
Confidence 3456655442 23446678888999999988887642 34555555554 3 4444457778888777653
Q ss_pred CCCccch--------hhhhhceeeecCCCCCC
Q 014393 263 PPPPAIA--------EFAIANLIKMGFPQRAG 286 (425)
Q Consensus 263 ~pp~~~~--------~~~~~~Li~mGFP~~~~ 286 (425)
|...-. ......++++|||....
T Consensus 386 -pDl~ig~~~~~~~a~k~gip~~~~~fPi~dr 416 (458)
T 1mio_B 386 -VDLLISNTYGKFIAREENIPFVRFGFPIMDR 416 (458)
T ss_dssp -CSEEEESGGGHHHHHHHTCCEEECSSCCCSC
T ss_pred -CCEEEeCcchHHHHHHcCCCEEEeeCCceec
Confidence 332211 12345799999997653
No 360
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.51 E-value=25 Score=22.30 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=17.7
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|++.|=..-++..|...|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H 33 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQTH 33 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHh
Confidence 488888888888777777775443
No 361
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.37 E-value=21 Score=23.01 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=19.4
Q ss_pred ceeCC--CCCcccccccchhhhccCC
Q 014393 383 YVACP--KCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~--~C~~~fC~dCD~fiHe~lh 406 (425)
.|+|+ .|++.|-..-++-.|...|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~H 37 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRSH 37 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTTS
T ss_pred CeECCCCCCCCccCCHHHHHHHHHHh
Confidence 58897 8999998888888887666
No 362
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.33 E-value=18 Score=23.36 Aligned_cols=25 Identities=24% Similarity=0.675 Sum_probs=21.7
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|=..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTTT
T ss_pred CeECCCCCchhCCHHHHHHHHHHcC
Confidence 5999999999999999988877663
No 363
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=30.17 E-value=15 Score=23.19 Aligned_cols=25 Identities=24% Similarity=0.478 Sum_probs=21.3
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|=..-++..|...|.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRTHA 34 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGGC
T ss_pred CccCCCcChhhCCHHHHHHHHHhcC
Confidence 5999999999999888888877663
No 364
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=30.04 E-value=27 Score=32.63 Aligned_cols=44 Identities=23% Similarity=0.540 Sum_probs=31.4
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchh--hhccCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY--IHESLHNCPGCES 413 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f--iHe~lh~CPgC~~ 413 (425)
-..|..|...+.. ..+|+.|+..|=..|=-- -+..-+.||.|..
T Consensus 180 i~~C~iC~~iv~~-------g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLIQ-------GQSCETCGIRMHLPCVAKYFQSNAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCSS-------CEECSSSCCEECHHHHHHHTTTCSSCBCTTTCC
T ss_pred CCcCcchhhHHhC-------CcccCccChHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 3479999866642 378999998887777532 2334569999976
No 365
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=29.87 E-value=20 Score=28.27 Aligned_cols=36 Identities=25% Similarity=0.541 Sum_probs=27.0
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhc
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE 403 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe 403 (425)
...|..|...+..+ .+..|..|+..||..|..-+|.
T Consensus 3 e~~C~~C~~~~~~~-----av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 3 KVLCQFCDQDPAQD-----AVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCBCTTCCSSSCCB-----CCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCcCCCCCCCCC-----ceEECCcCChHHhHHHCHHHhc
Confidence 45799998542211 2456999999999999998887
No 366
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.85 E-value=69 Score=24.38 Aligned_cols=45 Identities=24% Similarity=0.550 Sum_probs=32.4
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcccccccchhhhccC--CCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL--HNCPGCESL 414 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe~l--h~CPgC~~~ 414 (425)
...|..|...|.. ..+|+.|++.|=.+|=.---.+- .+||.|...
T Consensus 15 i~~C~IC~~~i~~-------g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLIQ-------GQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCSS-------SEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSC
T ss_pred CCcCcchhhHccc-------CCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCc
Confidence 3579999987742 35799999999888854222333 799999863
No 367
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=29.81 E-value=24 Score=27.90 Aligned_cols=27 Identities=22% Similarity=0.602 Sum_probs=21.1
Q ss_pred EEcCCCCcccc-----CCCCCCCCCCceecCc
Q 014393 305 YTCPRCKARVC-----ELPTDCRICGLQLVSS 331 (425)
Q Consensus 305 y~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~ 331 (425)
-.||-|..+.- ..++.|..||.+|.-+
T Consensus 35 VkCp~C~~~q~VFSha~t~V~C~~Cg~~L~~P 66 (82)
T 3u5c_b 35 VKCPGCLNITTVFSHAQTAVTCESCSTILCTP 66 (82)
T ss_dssp EECTTSCSCEEEESBCSSCCCCSSSCCCCEEC
T ss_pred EECCCCCCeeEEEecCCeEEEccccCCEEecc
Confidence 36999998654 4678999999998654
No 368
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.80 E-value=13 Score=23.90 Aligned_cols=25 Identities=24% Similarity=0.654 Sum_probs=21.8
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAIHT 36 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTTSC
T ss_pred CeECCCCChhhCCHHHHHHHHHHhC
Confidence 5899999999999999988887774
No 369
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=29.12 E-value=99 Score=28.77 Aligned_cols=54 Identities=11% Similarity=-0.108 Sum_probs=38.5
Q ss_pred cEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecc-----hHHHHHHHHHhhCCeEE
Q 014393 191 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA-----EMFICKHLCQDTGGSYS 246 (425)
Q Consensus 191 reILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~-----e~~iLk~iA~~TGG~Y~ 246 (425)
++|+|+-|.+++ -||=.-++..|.+.|.+|.++-++. +.....++++..|+...
T Consensus 59 ~~v~VlcG~GNN--GGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNN--GGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHH--HHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCC--HHHHHHHHHHHHHCCCeEEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 578888886543 4677889999999999999987764 12334455667777653
No 370
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.05 E-value=14 Score=23.86 Aligned_cols=25 Identities=24% Similarity=0.642 Sum_probs=21.3
Q ss_pred ceeCCCCCcccccccchhhhccCCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
.|.|+.|+..|-..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRIHT 36 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGGGS
T ss_pred CcCCCCCCchhCCHHHHHHHHHHhC
Confidence 5899999999999999888877663
No 371
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=28.65 E-value=40 Score=24.66 Aligned_cols=35 Identities=26% Similarity=0.631 Sum_probs=25.0
Q ss_pred CCccccccccccCCCCCCCcceeCCC--CCcccccccch
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPK--CKKHFCLECDI 399 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~--C~~~fC~dCD~ 399 (425)
...|..|...+...++ =..-.|.. |+..||.-|-.
T Consensus 6 ~k~CP~C~~~Iek~~G--CnhmtC~~~~C~~~FCw~C~~ 42 (60)
T 1wd2_A 6 TKECPKCHVTIEKDGG--CNHMVCRNQNCKAEFCWVCLG 42 (60)
T ss_dssp CCCCTTTCCCCSSCCS--CCSSSCCSSGGGSCCSSSSCS
T ss_pred ceECcCCCCeeEeCCC--CCcEEECCCCcCCEEeeCcCC
Confidence 4579999988765321 11246988 99999999964
No 372
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=28.47 E-value=24 Score=34.74 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=30.0
Q ss_pred ceeeecCCccc----cCeEEcCCCCccccCC--CCCCCCCCceecCch
Q 014393 291 SICSCHKEVKV----GVGYTCPRCKARVCEL--PTDCRICGLQLVSSP 332 (425)
Q Consensus 291 a~C~CH~~~~~----~~Gy~Cp~C~s~~C~l--P~~C~~C~l~Lvs~p 332 (425)
.+=.|...++- ..--.||-|+|+|..- -..|++|++.-|-.+
T Consensus 270 ~F~iCa~s~tPIY~g~~~v~Cp~cgA~y~~~~kG~lC~vC~l~~IG~~ 317 (325)
T 3mv2_A 270 KFDICAATYKPIYEDTPSVSDPLTGSKYVITEKDKIDRIAMISKIGAP 317 (325)
T ss_dssp CEEECTTTCCEEESSSCEEECTTTCCEEEGGGTTSBCSSSSCBBTTCC
T ss_pred CceeecCCcccccCCCCCccCCCCCCeechhhCCCCCCCCcCcccCCC
Confidence 35556665542 2255799999999964 579999999877543
No 373
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=28.46 E-value=1e+02 Score=26.26 Aligned_cols=31 Identities=16% Similarity=0.137 Sum_probs=19.6
Q ss_pred HHHHHHhhCCeEEEecCHhHHHHHHHhcCCC
Q 014393 234 CKHLCQDTGGSYSVALDESHFKELIMEHAPP 264 (425)
Q Consensus 234 Lk~iA~~TGG~Y~~~~d~~~L~~lL~~~~~p 264 (425)
++++++..+..+....|.+.+-+.+.....|
T Consensus 108 ~~~~~~~~~~~~~~~~d~~eai~~~~~~~~~ 138 (163)
T 3mvn_A 108 VSEVLANLAQPAISADDVDELVMRIVQQAKP 138 (163)
T ss_dssp HHHHHTTCCSCEEEESSHHHHHHHHHHHCCT
T ss_pred HHHHHhhCCCCeEEECCHHHHHHHHHHhCCC
Confidence 5666665555566667776666666666654
No 374
>2k0a_A PRE-mRNA-splicing factor RDS3; zinc finger, topological knot, mRNA processing, nucleus, spliceosome, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=28.44 E-value=21 Score=29.40 Aligned_cols=30 Identities=30% Similarity=0.793 Sum_probs=21.6
Q ss_pred ceeeecCCccccCeEEcCCCCccccCCCCCCCCCCce
Q 014393 291 SICSCHKEVKVGVGYTCPRCKARVCELPTDCRICGLQ 327 (425)
Q Consensus 291 a~C~CH~~~~~~~Gy~Cp~C~s~~C~lP~~C~~C~l~ 327 (425)
-+=+|.+......|++|..|--+ |++|.+.
T Consensus 9 DLimC~KqpG~~iG~lCekcdGk-------C~iCDs~ 38 (109)
T 2k0a_A 9 DLIMCLKQPGVQTGLLCEKCDGK-------CPICDSY 38 (109)
T ss_dssp TCCBCCCCEEEEECEECGGGTTC-------CTTTCCC
T ss_pred hhhhccCCCcchhhhhhhhcCCc-------ccccCCc
Confidence 45567776543339999999765 9999983
No 375
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=28.39 E-value=2e+02 Score=22.44 Aligned_cols=36 Identities=3% Similarity=-0.024 Sum_probs=30.0
Q ss_pred CHHHHHHHHHhCCcEEEEEEecchHHHHHHHHHhhC
Q 014393 207 DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTG 242 (425)
Q Consensus 207 ~i~~ti~~akk~~I~V~vIglg~e~~iLk~iA~~TG 242 (425)
.-..+...+++.+|....|-+..+..+.+++.+.+|
T Consensus 32 ~C~~ak~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g 67 (109)
T 1wik_A 32 FSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSN 67 (109)
T ss_dssp THHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHHhC
Confidence 456888899999999999999887777777777776
No 376
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.32 E-value=21 Score=21.62 Aligned_cols=20 Identities=10% Similarity=0.375 Sum_probs=14.3
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.|+..+....+|.+-
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H 28 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSH 28 (37)
T ss_dssp CCEETTTTEECSSHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHH
Confidence 45667788888888777653
No 377
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.28 E-value=9.9 Score=24.04 Aligned_cols=24 Identities=21% Similarity=0.452 Sum_probs=20.0
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|-..-++..|...|
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~H 34 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVLIH 34 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTHHH
T ss_pred CEeCCCcChhhCCHHHHHHHHHHc
Confidence 599999999998888888886554
No 378
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=28.23 E-value=43 Score=31.96 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=23.0
Q ss_pred eeeecCCccccCeEEcCCCCccccC-------------CCCCCCCCCcee
Q 014393 292 ICSCHKEVKVGVGYTCPRCKARVCE-------------LPTDCRICGLQL 328 (425)
Q Consensus 292 ~C~CH~~~~~~~Gy~Cp~C~s~~C~-------------lP~~C~~C~l~L 328 (425)
.--+|+++. -..|+.|+..+-. .++.|+.||-.|
T Consensus 127 v~elHG~~~---~~~C~~C~~~~~~~~~~~~~~~~~~~~~P~C~~Cgg~l 173 (289)
T 1q1a_A 127 IIEAHGSFA---HCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELV 173 (289)
T ss_dssp EEETTEEEE---EEEETTTCCEECHHHHHHHHTCSSCCSCCBCTTTCCBE
T ss_pred EEEecCCcC---ceEECCCCCCCcHHHHHHHHhhccCCCCccCCCCCCEE
Confidence 456676542 4579999876531 467999999654
No 379
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=28.04 E-value=20 Score=28.23 Aligned_cols=27 Identities=19% Similarity=0.492 Sum_probs=21.4
Q ss_pred EcCCCCcccc-----CCCCCCCCCCceecCch
Q 014393 306 TCPRCKARVC-----ELPTDCRICGLQLVSSP 332 (425)
Q Consensus 306 ~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~p 332 (425)
.||-|..+.- ..++.|..||.+|.-++
T Consensus 34 kCp~C~n~q~VFShA~t~V~C~~Cg~~L~~PT 65 (81)
T 2xzm_6 34 KCAQCQNIQMIFSNAQSTIICEKCSAILCKPT 65 (81)
T ss_dssp ECSSSCCEEEEETTCSSCEECSSSCCEEEEEC
T ss_pred ECCCCCCeeEEEecCccEEEccCCCCEEeecC
Confidence 6999998755 46689999999987553
No 380
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=27.71 E-value=23 Score=25.81 Aligned_cols=25 Identities=32% Similarity=0.515 Sum_probs=16.0
Q ss_pred EEcCCCCcc--ccC---CCCCCCCCCceec
Q 014393 305 YTCPRCKAR--VCE---LPTDCRICGLQLV 329 (425)
Q Consensus 305 y~Cp~C~s~--~C~---lP~~C~~C~l~Lv 329 (425)
..||.|++. +=. =-..|..||+.|-
T Consensus 12 ~~Cp~C~~~~lv~D~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 12 VTCPNHPDAILVEDYRAGDMICPECGLVVG 41 (58)
T ss_dssp CSBTTBSSSCCEECSSSCCEECTTTCCEEC
T ss_pred ccCcCCCCCceeEeCCCCeEEeCCCCCEEe
Confidence 468888762 111 2357889998864
No 381
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=27.22 E-value=11 Score=35.33 Aligned_cols=31 Identities=26% Similarity=0.579 Sum_probs=19.8
Q ss_pred CCccccccccccCCC----CCCCcceeCCCCCccc
Q 014393 363 RSTCFGCQQSLLSSG----NKPGLYVACPKCKKHF 393 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~----~~~~~~~~C~~C~~~f 393 (425)
.+.|.||...+|... ........||.|+.+.
T Consensus 198 ~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 198 KQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRIL 232 (256)
T ss_dssp TTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEE
T ss_pred CCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeE
Confidence 568999999887431 0112346788887653
No 382
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=27.05 E-value=18 Score=36.54 Aligned_cols=45 Identities=27% Similarity=0.485 Sum_probs=31.2
Q ss_pred CCCccccccccccCCCCCCCcceeCC--CCCcccccccchh----------hhccCCCCCCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACP--KCKKHFCLECDIY----------IHESLHNCPGCESL 414 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~--~C~~~fC~dCD~f----------iHe~lh~CPgC~~~ 414 (425)
...+|.-|- .+ ...+.|. .|...||.+|=.. ..+.--+|--|...
T Consensus 92 ~~~yCr~C~----~G----g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 92 YQSYCSICC----SG----ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp SBCSCTTTC----CC----SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CcccceEcC----CC----CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 356888886 22 2468999 9999999999432 22355678888654
No 383
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=26.73 E-value=23 Score=23.00 Aligned_cols=22 Identities=23% Similarity=0.403 Sum_probs=17.3
Q ss_pred CCCCCCCCCCceecCchhHHhh
Q 014393 316 ELPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 316 ~lP~~C~~C~l~Lvs~phLars 337 (425)
+-|-+|+.||..+...-+|.|-
T Consensus 6 ekp~~C~~CgK~F~~~s~L~~H 27 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSPSTLEAH 27 (36)
T ss_dssp CCCCEETTTTEECSCHHHHHHH
T ss_pred ccCeECCCCCCccCCHhHccCc
Confidence 3466788899999999888764
No 384
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=26.52 E-value=80 Score=29.90 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=38.7
Q ss_pred cEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecc----hHHHHHHHHHhhCCeE
Q 014393 191 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA----EMFICKHLCQDTGGSY 245 (425)
Q Consensus 191 reILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~----e~~iLk~iA~~TGG~Y 245 (425)
++|+|+.|.+++ -||=..++..|...|.+|.++-++. +.....++++..|+..
T Consensus 80 ~~VlVlcG~GNN--GGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~~~~~~~~~~~g~~~ 136 (265)
T 2o8n_A 80 PTVLVICGPGNN--GGDGLVCARHLKLFGYQPTIYYPKRPNKPLFTGLVTQCQKMDIPF 136 (265)
T ss_dssp CEEEEEECSSHH--HHHHHHHHHHHHHTTCEEEEECCSCCSSHHHHHHHHHHHHTTCCB
T ss_pred CeEEEEECCCCC--HHHHHHHHHHHHHCCCcEEEEEeCCCCCHHHHHHHHHHHHcCCcE
Confidence 478888886543 5677889999999999999987653 2344556667777764
No 385
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=26.51 E-value=33 Score=25.75 Aligned_cols=61 Identities=20% Similarity=0.407 Sum_probs=30.9
Q ss_pred cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCcceeCCCCCcccccccchhhhc---cCCCCCCCC
Q 014393 339 HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE---SLHNCPGCE 412 (425)
Q Consensus 339 hhlfp~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~fiHe---~lh~CPgC~ 412 (425)
||-|+..++-+-+ ......+| -|.++... ...-+|..|...|=..|--.--+ ....||.|.
T Consensus 2 ~~~~~~~~~~~~~-------~~~~~~~C-iC~~~~~~-----~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~ 65 (68)
T 3o70_A 2 HHHHHHSSGRENL-------YFQGLVTC-FCMKPFAG-----RPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 65 (68)
T ss_dssp ------------C-------TTTTCCCS-TTCCCCTT-----CCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHH
T ss_pred cccccCCcccccC-------CCCCceEe-ECCCcCCC-----CCEEECCCCCccccccccCcCcccCCCcEECCCCC
Confidence 5556666666542 12246689 88865431 12468999999998888665443 345677664
No 386
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=26.17 E-value=17 Score=34.78 Aligned_cols=48 Identities=19% Similarity=0.355 Sum_probs=33.8
Q ss_pred CCCccccccccccCCCCCCCcceeCCCCCcccccccch-hhhcc-CCCCCC--CCCCCC
Q 014393 362 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHES-LHNCPG--CESLRH 416 (425)
Q Consensus 362 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~-fiHe~-lh~CPg--C~~~~~ 416 (425)
.+-.|.-|...|.++ .....|++.||..|=. ++-+. -..||- |.....
T Consensus 180 ~el~CPIcl~~f~DP-------Vts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 180 IELTCPITCKPYEAP-------LISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp CCSBCTTTSSBCSSE-------EEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred eeeECcCccCcccCC-------eeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 456899999888654 3346899999999975 34332 247996 976443
No 387
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=25.93 E-value=31 Score=25.94 Aligned_cols=28 Identities=21% Similarity=0.565 Sum_probs=23.8
Q ss_pred eEEcCCCCccccCCCCCCCCCCceecCc
Q 014393 304 GYTCPRCKARVCELPTDCRICGLQLVSS 331 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP~~C~~C~l~Lvs~ 331 (425)
++.||.|....=-.-..|-+|++.+-++
T Consensus 8 ~W~CP~CTf~N~p~~p~CEmC~~prp~~ 35 (64)
T 3b08_B 8 GWQCPGCTFINKPTRPGCEMCCRARPET 35 (64)
T ss_dssp SEECTTTCCEECTTCSBCTTTCCBCCSS
T ss_pred CCcCCCccccCCCCCCccCcCCCCCCcc
Confidence 7999999988877778999999987554
No 388
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=25.72 E-value=34 Score=33.78 Aligned_cols=42 Identities=29% Similarity=0.618 Sum_probs=30.2
Q ss_pred CCccccccccccCCCCCCCcceeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 014393 363 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 363 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
...|..|...+..+ .+ -.|++. ||..|-.- +..||-|-....
T Consensus 295 ~~~C~IC~~~~~~~------v~--lpCgH~~fC~~C~~~----~~~CP~CR~~i~ 337 (345)
T 3t6p_A 295 ERTCKVCMDKEVSV------VF--IPCGHLVVCQECAPS----LRKCPICRGIIK 337 (345)
T ss_dssp TCBCTTTSSSBCCE------EE--ETTCCEEECTTTGGG----CSBCTTTCCBCC
T ss_pred CCCCCccCCcCCce------EE--cCCCChhHhHHHHhc----CCcCCCCCCCcc
Confidence 45799998666432 22 269999 99999763 389999976543
No 389
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=25.69 E-value=32 Score=26.51 Aligned_cols=26 Identities=19% Similarity=0.598 Sum_probs=18.3
Q ss_pred eEEcCCCCccccCCCC----CCCCCCceec
Q 014393 304 GYTCPRCKARVCELPT----DCRICGLQLV 329 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP~----~C~~C~l~Lv 329 (425)
-|.||.|+..-=+-.. .|.-|+.++.
T Consensus 26 ky~C~fCgk~~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 26 RYDCSFCGKKTVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp CBCCSSCCSSCBSBCSSSCBCCSSSCCCCC
T ss_pred CccCCCCCCceeEecCCCeEECCCCCCEEe
Confidence 6999999876433222 7999987753
No 390
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=25.42 E-value=24 Score=31.64 Aligned_cols=50 Identities=6% Similarity=-0.158 Sum_probs=31.6
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcccccccchh-hhccCCCCCCCCCCCCCCccc
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-IHESLHNCPGCESLRHSNPIV 421 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD~f-iHe~lh~CPgC~~~~~~~~~~ 421 (425)
-.|.-|...|.+|. ...|++.||..|=.- +.+.-+.||.|........++
T Consensus 107 f~CPI~~elm~DPV--------~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~ 157 (179)
T 2f42_A 107 LCGKISFELMREPC--------ITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLI 157 (179)
T ss_dssp GBCTTTCSBCSSEE--------ECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCE
T ss_pred hcccCccccCCCCe--------ECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCc
Confidence 36888887776541 336999999999433 222223699998755443333
No 391
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=25.39 E-value=26 Score=23.69 Aligned_cols=11 Identities=27% Similarity=0.739 Sum_probs=8.8
Q ss_pred eEEcCCCCccc
Q 014393 304 GYTCPRCKARV 314 (425)
Q Consensus 304 Gy~Cp~C~s~~ 314 (425)
.|.||+|+..+
T Consensus 9 ~~~C~~C~~~i 19 (39)
T 2i5o_A 9 QVPCEKCGSLV 19 (39)
T ss_dssp EEECTTTCCEE
T ss_pred CcccccccCcC
Confidence 78999998753
No 392
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.29 E-value=30 Score=26.90 Aligned_cols=42 Identities=19% Similarity=0.290 Sum_probs=25.1
Q ss_pred ccccccccc-cCCCC-------CCCcceeCCCCCcccccccchhhh-ccCC
Q 014393 365 TCFGCQQSL-LSSGN-------KPGLYVACPKCKKHFCLECDIYIH-ESLH 406 (425)
Q Consensus 365 ~C~~C~~~~-~~~~~-------~~~~~~~C~~C~~~fC~dCD~fiH-e~lh 406 (425)
.|--|.+.| ..... -....|.|+.|++.|-..-++-.| ...|
T Consensus 36 ~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H 86 (96)
T 2ctd_A 36 SCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANH 86 (96)
T ss_dssp ECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred CCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence 577777777 43210 012247777777777777777777 5555
No 393
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=25.24 E-value=28 Score=25.71 Aligned_cols=21 Identities=33% Similarity=0.903 Sum_probs=15.5
Q ss_pred eEEcCCCCccccCCC-CCCCCCCc
Q 014393 304 GYTCPRCKARVCELP-TDCRICGL 326 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP-~~C~~C~l 326 (425)
--.||+|+.. .+| ..|+.||.
T Consensus 30 l~~c~~cG~~--~~pH~vc~~CG~ 51 (60)
T 2zjr_Z 30 LTECPQCHGK--KLSHHICPNCGY 51 (60)
T ss_dssp CEECTTTCCE--ECTTBCCTTTCB
T ss_pred ceECCCCCCE--eCCceEcCCCCc
Confidence 3478888888 555 67888884
No 394
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=24.85 E-value=1.3e+02 Score=28.92 Aligned_cols=8 Identities=25% Similarity=0.148 Sum_probs=4.7
Q ss_pred eeCCCCCH
Q 014393 145 LTDLGGSP 152 (425)
Q Consensus 145 lspLT~d~ 152 (425)
+.|+|+..
T Consensus 20 ~~plsG~~ 27 (419)
T 3h5l_A 20 PAPLTGIV 27 (419)
T ss_dssp EECCSSTT
T ss_pred eecCCCcc
Confidence 34677753
No 395
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=24.26 E-value=31 Score=25.96 Aligned_cols=22 Identities=41% Similarity=1.022 Sum_probs=16.4
Q ss_pred eecCCccccCeEEcCCCCccccCC
Q 014393 294 SCHKEVKVGVGYTCPRCKARVCEL 317 (425)
Q Consensus 294 ~CH~~~~~~~Gy~Cp~C~s~~C~l 317 (425)
.|-.++... ||.| +|+-.||..
T Consensus 20 ~C~kkvgl~-~f~C-rCg~~FC~~ 41 (64)
T 1wg2_A 20 SCNKKVGVM-GFKC-KCGSTFCGS 41 (64)
T ss_dssp TTCCCCTTS-CEEC-TTSCEECSS
T ss_pred hhCCccccc-CeEe-ecCCEeccc
Confidence 455555556 8999 999999963
No 396
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.09 E-value=35 Score=21.75 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=16.2
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 014393 317 LPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLars 337 (425)
-|-.|+.||..+.....|.+-
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eov_A 11 KPYKCSDCGKSFTWKSRLRIH 31 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHH
T ss_pred CCccCCccChhhCCHHHHHHH
Confidence 355778889999888888764
No 397
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.03 E-value=15 Score=27.29 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=22.9
Q ss_pred cceeCCCCCcccccccchhhhccCCC
Q 014393 382 LYVACPKCKKHFCLECDIYIHESLHN 407 (425)
Q Consensus 382 ~~~~C~~C~~~fC~dCD~fiHe~lh~ 407 (425)
..|+|+.|++.|-..-.+-.|...|.
T Consensus 12 kpy~C~~CgK~F~~~s~L~~H~r~Ht 37 (66)
T 2epp_A 12 GILPCGLCGKVFTDANRLRQHEAQHG 37 (66)
T ss_dssp CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred cCcCCCCCCCccCCHHHHHhhhhhhC
Confidence 46999999999999999999988874
No 398
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=23.93 E-value=21 Score=28.13 Aligned_cols=26 Identities=19% Similarity=0.634 Sum_probs=17.3
Q ss_pred eEEcCCCCccccCCC----CCCCCCCceec
Q 014393 304 GYTCPRCKARVCELP----TDCRICGLQLV 329 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP----~~C~~C~l~Lv 329 (425)
-|.||.|+.-.=.-| -.|+-||.++.
T Consensus 27 ~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 27 DHACPNCGEDRVDRQGTGIWQCSYCDYKFT 56 (83)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEE
T ss_pred cCcCCCCCCcceeccCCCeEECCCCCCEec
Confidence 689999988322222 35888988753
No 399
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=23.80 E-value=2.8e+02 Score=28.00 Aligned_cols=62 Identities=19% Similarity=0.249 Sum_probs=47.2
Q ss_pred EEEEEEeCCCCCCccCHH-HHHHHHHhC--CcEEEEEEecchHHHHHHHHHhhCCeEEEecCHhHHHHHH
Q 014393 192 EVLILYSALSTCDPGDIM-ETIQKCKES--KIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELI 258 (425)
Q Consensus 192 eILVI~~s~~t~dp~~i~-~ti~~akk~--~I~V~vIglg~e~~iLk~iA~~TGG~Y~~~~d~~~L~~lL 258 (425)
+-|.|+||- |+|= +|++-++++ +++|..++-|..+..|.+.+.+.+=.|.+..|+....++-
T Consensus 10 k~i~ILGST-----GSIGtqtLdVi~~~pd~f~V~aL~ag~nv~~L~~q~~~f~p~~v~v~d~~~~~~L~ 74 (406)
T 1q0q_A 10 KQLTILGST-----GSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLK 74 (406)
T ss_dssp EEEEEETTT-----SHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHH
T ss_pred eeEEEEccC-----cHHHHHHHHHHHhCCCccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHH
Confidence 345566652 4554 678888876 6778877778889999999999999999999988765543
No 400
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.77 E-value=29 Score=22.24 Aligned_cols=20 Identities=30% Similarity=0.670 Sum_probs=14.5
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKH 31 (46)
T ss_dssp SEECSSSCCEESSSHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHH
Confidence 44566788888888888764
No 401
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=23.60 E-value=25 Score=29.56 Aligned_cols=26 Identities=23% Similarity=0.584 Sum_probs=18.0
Q ss_pred eEEcCCCCc----cccCCCCCCCCCCceec
Q 014393 304 GYTCPRCKA----RVCELPTDCRICGLQLV 329 (425)
Q Consensus 304 Gy~Cp~C~s----~~C~lP~~C~~C~l~Lv 329 (425)
-|.||.|+. +...---.|+-|+.++.
T Consensus 60 kytCPfCGk~~vKR~avGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 60 DHACPNCGEDRVDRQGTGIWQCSYCDYKFT 89 (116)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEE
T ss_pred CCcCCCCCCceeEecCceeEECCCCCCEEE
Confidence 799999987 22222236999998854
No 402
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.34 E-value=36 Score=21.78 Aligned_cols=21 Identities=24% Similarity=0.621 Sum_probs=16.5
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 014393 317 LPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLars 337 (425)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eoh_A 11 KPYECKECRKTFIQIGHLNQH 31 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHH
T ss_pred CCcCCCCcCchhCCHHHHHHH
Confidence 355788899999998888764
No 403
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.33 E-value=36 Score=21.55 Aligned_cols=21 Identities=24% Similarity=0.498 Sum_probs=15.9
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 014393 317 LPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLars 337 (425)
-|-.|+.|+..+....+|.+-
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (44)
T 2eou_A 11 TTSECQECGKIFRHSSLLIEH 31 (44)
T ss_dssp CCCCCTTTCCCCSSHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHH
Confidence 355778888888888888664
No 404
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=23.02 E-value=25 Score=26.62 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=13.9
Q ss_pred EEcCCCCccccCCCC----CCCCCCce
Q 014393 305 YTCPRCKARVCELPT----DCRICGLQ 327 (425)
Q Consensus 305 y~Cp~C~s~~C~lP~----~C~~C~l~ 327 (425)
.+||+|++..-.... .|+.||+.
T Consensus 11 L~CP~ck~~L~~~~~~g~LvC~~c~~~ 37 (67)
T 2jny_A 11 LACPKDKGPLRYLESEQLLVNERLNLA 37 (67)
T ss_dssp CBCTTTCCBCEEETTTTEEEETTTTEE
T ss_pred hCCCCCCCcCeEeCCCCEEEcCCCCcc
Confidence 578888875432222 47777655
No 405
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=22.91 E-value=16 Score=29.68 Aligned_cols=34 Identities=24% Similarity=0.712 Sum_probs=28.7
Q ss_pred CcceeeecCCccccCeEEcCCCCccccCCCCCCCCCCcee
Q 014393 289 SISICSCHKEVKVGVGYTCPRCKARVCELPTDCRICGLQL 328 (425)
Q Consensus 289 ~~a~C~CH~~~~~~~Gy~Cp~C~s~~C~lP~~C~~C~l~L 328 (425)
..++-.||. .|.|=.|++..=.....|++|+..|
T Consensus 38 ~k~LV~C~d------HYLCl~CLtlmL~~SdrCpIC~~pL 71 (99)
T 2ko5_A 38 NKGLVECNN------HYLCLNCLTLLLSVSNRCPICKMPL 71 (99)
T ss_dssp CSSEEECSS------CEEEHHHHHHTCSSSSEETTTTEEC
T ss_pred cCCeeeecc------hhhHHHHHHHHHhhccCCcccCCcC
Confidence 345666774 8999999999999999999999875
No 406
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=22.91 E-value=74 Score=30.51 Aligned_cols=67 Identities=13% Similarity=0.268 Sum_probs=0.0
Q ss_pred HHHHHHHHhhCCeEEEecCHhHHHHHHHhcCCCCccchhhhhhceeeecCCCCCCCCCcceeeecCCccccCeEEcCCCC
Q 014393 232 FICKHLCQDTGGSYSVALDESHFKELIMEHAPPPPAIAEFAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCK 311 (425)
Q Consensus 232 ~iLk~iA~~TGG~Y~~~~d~~~L~~lL~~~~~pp~~~~~~~~~~Li~mGFP~~~~~~~~a~C~CH~~~~~~~Gy~Cp~C~ 311 (425)
..|.++.+.....+.+..|-+.|.+.- |||. ...--+|+.+... .|..|+
T Consensus 97 ~~La~Le~~g~l~~viTQNIDgLh~rA---------------------G~~~------~~VielHGs~~~~---~C~~C~ 146 (285)
T 3glr_A 97 YFLRLLHDKGLLLRLYTQNIDGLERVS---------------------GIPA------SKLVEAHGTFASA---TCTVCQ 146 (285)
T ss_dssp HHHHHHHHTTCEEEEEECCCSCHHHHT---------------------TCCG------GGEEETTEEEEEE---EETTTC
T ss_pred HHHHHHHHcCCCceEEeeeecchHhhc---------------------CCCc------ccEEEecCCCCeE---EECCCC
Q ss_pred cccc----------CCCCCCCCCCcee
Q 014393 312 ARVC----------ELPTDCRICGLQL 328 (425)
Q Consensus 312 s~~C----------~lP~~C~~C~l~L 328 (425)
..|- ..++.|+.||-.|
T Consensus 147 ~~~~~~~~~~~i~~~~~P~C~~Cgg~l 173 (285)
T 3glr_A 147 RPFPGEDIRADVMADRVPRCPVCTGVV 173 (285)
T ss_dssp CEEEGGGGHHHHHTTCCCBCTTTCCBE
T ss_pred CcCCHHHHHHHhhcCCCCCCCCCCCcc
No 407
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=22.57 E-value=29 Score=26.43 Aligned_cols=41 Identities=27% Similarity=0.613 Sum_probs=28.1
Q ss_pred CccccccccccCCCCCCCcceeCCCCCcc-cccccchhhhccCCCCCCCCCCCC
Q 014393 364 STCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 416 (425)
Q Consensus 364 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCD~fiHe~lh~CPgC~~~~~ 416 (425)
..|.-|...+.+. .+ -.|++. ||.+|-.- +..||.|-....
T Consensus 19 ~~C~IC~~~~~~~------v~--~pCgH~~~C~~C~~~----~~~CP~Cr~~i~ 60 (79)
T 2yho_A 19 MLCMVCCEEEINS------TF--CPCGHTVCCESCAAQ----LQSCPVCRSRVE 60 (79)
T ss_dssp TBCTTTSSSBCCE------EE--ETTCBCCBCHHHHTT----CSBCTTTCCBCC
T ss_pred CEeEEeCcccCcE------EE--ECCCCHHHHHHHHHh----cCcCCCCCchhh
Confidence 4699997554321 22 268998 99999763 459999986443
No 408
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=22.51 E-value=31 Score=24.73 Aligned_cols=31 Identities=19% Similarity=0.588 Sum_probs=18.3
Q ss_pred CCccccccc--------cccCCCCCCCcceeCCCCCccc
Q 014393 363 RSTCFGCQQ--------SLLSSGNKPGLYVACPKCKKHF 393 (425)
Q Consensus 363 ~~~C~~C~~--------~~~~~~~~~~~~~~C~~C~~~f 393 (425)
...|..|.. ++.+.+......|.|.+|++.+
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w 53 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTW 53 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEE
T ss_pred EeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEe
Confidence 346888842 2222223345679999998753
No 409
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.46 E-value=30 Score=22.19 Aligned_cols=20 Identities=25% Similarity=0.517 Sum_probs=14.8
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIH 31 (46)
T ss_dssp CEECSSSCCEESSHHHHHHH
T ss_pred CEECcccCCccCCHhHHHHH
Confidence 44566788888888888764
No 410
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=22.45 E-value=3.7e+02 Score=23.05 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=38.6
Q ss_pred CcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEec--chHHHHHHHHHhhCCeEEEecCHhH------HHHHHHhc
Q 014393 190 HREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLS--AEMFICKHLCQDTGGSYSVALDESH------FKELIMEH 261 (425)
Q Consensus 190 sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg--~e~~iLk~iA~~TGG~Y~~~~d~~~------L~~lL~~~ 261 (425)
.-||||+-++ ++ | +..+.++.+.+..-+|.+|--. .-...+....+...|.|+...|.++ |..++..+
T Consensus 34 ~~eiIvvDd~-S~-d--~t~~~~~~~~~~~~~i~~i~~~n~G~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~ 109 (240)
T 3bcv_A 34 DIEIILIDDE-SP-D--NCPKICDDYAAQYPNIKVIHKKNAGLGMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVA 109 (240)
T ss_dssp SEEEEEEECC-CS-S--SHHHHHHHHHHHCSSEEEEECCCCCHHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHH
T ss_pred CeEEEEEECC-CC-c--CHHHHHHHHHhhCCCEEEEECCCCChHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHH
Confidence 4467766543 22 2 3455666655544345555421 1135566667777899998877663 55555444
Q ss_pred C
Q 014393 262 A 262 (425)
Q Consensus 262 ~ 262 (425)
.
T Consensus 110 ~ 110 (240)
T 3bcv_A 110 Q 110 (240)
T ss_dssp H
T ss_pred H
Confidence 3
No 411
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=22.10 E-value=1.8e+02 Score=28.63 Aligned_cols=134 Identities=15% Similarity=0.091 Sum_probs=66.1
Q ss_pred eEEEEEeCCHhhhcCCCCCCHHHHHHHHHHHHHHHHhccCCCCcEEEEeecCCceEEeeCCCCC-------HHHHHHHHh
Q 014393 88 YLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGS-------PESHIKALM 160 (425)
Q Consensus 88 ~lvlvLD~S~SM~a~D~~P~RL~~a~~~l~~FI~~~~~qnP~sqlGvI~~~~g~A~~lspLT~d-------~~~~i~~L~ 160 (425)
.=+||+|+.++.... ||-.+=+.+..|++.++.......+|=.++ ++-.+.|+.+. .+.+.+.|
T Consensus 125 yD~VIvDtpPtg~tL-----rlL~lP~~l~~~l~~l~~~~~~~~~g~~~~---~~~~~~p~~~~~~~~~~~~d~~~~~l- 195 (374)
T 3igf_A 125 YDTIVYDGTGDAFTL-----RMLGLPESLSWYVRRFRQLFVNSDLGKTIA---ESPLIQPLISSFFNVNWTADNFAQPT- 195 (374)
T ss_dssp CSEEEEECCCSHHHH-----HHHTHHHHHHHHHHHTTSCC--------------------------------------C-
T ss_pred CCEEEEeCCCChHHh-----hhhhhhHHHHHHHHHHHHHHhhhccccccc---cchhhhhhhhhhccCCCchHHHHHHH-
Confidence 448899998876543 788888888888888765443221110000 01222333211 01111111
Q ss_pred hhhcCCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCCCCCccCHHHHHHHHHhCCcEEEEEEecchHHHHHHHHHh
Q 014393 161 GKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQD 240 (425)
Q Consensus 161 ~~l~~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~e~~iLk~iA~~ 240 (425)
-.+..-++.+...|++- ..+ .+++++..... .-.+...+++.+++.||+|.-|-+... ..+++|.+.
T Consensus 196 --------~~~~~~~~~~~~~L~dp--~~t-~~vlVt~pe~~-sl~ea~r~~~~L~~~gi~v~gvVvN~~-~~l~~i~~~ 262 (374)
T 3igf_A 196 --------NQVNNFLDKGKEALADP--KRV-AAFLVTTADPL-EVVSVRYLWGSAQQIGLTIGGVIQVSS-QTEGDLSAE 262 (374)
T ss_dssp --------HHHHHHHHHHHHHHHCT--TTE-EEEEEECSCHH-HHHHHHHHHHHHHHHTCCEEEEEECCC-SCCCCCGGG
T ss_pred --------HHHHHHHHHHHHHHhcc--CCe-EEEEEECCCcc-HHHHHHHHHHHHHHcCCCccEEEEcCH-HHHHHHHHh
Confidence 13556677777888763 112 35555543211 112334678999999999987776541 134444444
Q ss_pred hCC
Q 014393 241 TGG 243 (425)
Q Consensus 241 TGG 243 (425)
-.+
T Consensus 263 F~~ 265 (374)
T 3igf_A 263 FTP 265 (374)
T ss_dssp STT
T ss_pred cCC
Confidence 444
No 412
>2xoc_A E3 ubiquitin-protein ligase CHFR; zinc-binding, poly(ADP-ribose) mitosis, antephase checkpoint, cell cycle; HET: PGE ADP ADE; 1.89A {Homo sapiens} PDB: 2xoy_A* 2xoz_A* 2xp0_A
Probab=21.99 E-value=37 Score=32.41 Aligned_cols=47 Identities=23% Similarity=0.552 Sum_probs=33.5
Q ss_pred CccccccccccCCC-----CCCCcceeCCCCCcccccccchhhhccCCCCCCCCC
Q 014393 364 STCFGCQQSLLSSG-----NKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 413 (425)
Q Consensus 364 ~~C~~C~~~~~~~~-----~~~~~~~~C~~C~~~fC~dCD~fiHe~lh~CPgC~~ 413 (425)
..|..|...+|... .......+|..|+..|| .+|.+..-..|.||.+
T Consensus 80 ~~C~~C~~~MP~R~~~~~~~~~~~pq~C~iC~r~FC---~lYw~c~~~~c~g~L~ 131 (261)
T 2xoc_A 80 ALCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFC---HLYWGCTRTGCYGCLA 131 (261)
T ss_dssp EECTTTCCEEECCHHHHHTCTTSCCCBCTTTCCBCC---HHHHCCCCTTCSCSEE
T ss_pred cCcCcccCcCCCCCccccccCCCCCCCCCCcCcccc---CcccccCCCCCccccc
Confidence 36999998888631 11133578999999997 4677766677878864
No 413
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.97 E-value=31 Score=22.09 Aligned_cols=20 Identities=30% Similarity=0.860 Sum_probs=15.0
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQH 31 (46)
T ss_dssp SEECSSSCCEESSHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHH
Confidence 34566788888888888764
No 414
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=21.91 E-value=15 Score=24.89 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=19.9
Q ss_pred ceeCCCCCcccccccchhhhccCC
Q 014393 383 YVACPKCKKHFCLECDIYIHESLH 406 (425)
Q Consensus 383 ~~~C~~C~~~fC~dCD~fiHe~lh 406 (425)
.|.|+.|+..|-..-++-.|...|
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~H 47 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLELR 47 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHh
Confidence 599999999998888887776655
No 415
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=21.88 E-value=31 Score=22.12 Aligned_cols=20 Identities=35% Similarity=0.692 Sum_probs=14.6
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATH 31 (46)
T ss_dssp SEECSSSSCEESSHHHHHHH
T ss_pred CEECCCCCcccCCHHHHHHH
Confidence 34566788888888888764
No 416
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=21.85 E-value=37 Score=25.53 Aligned_cols=22 Identities=36% Similarity=0.976 Sum_probs=15.9
Q ss_pred eecCCccccCeEEcCCCCccccCC
Q 014393 294 SCHKEVKVGVGYTCPRCKARVCEL 317 (425)
Q Consensus 294 ~CH~~~~~~~Gy~Cp~C~s~~C~l 317 (425)
.|-.++.-. ||.| +|+-.||..
T Consensus 20 ~C~kkvgl~-~f~C-rCg~~FC~~ 41 (64)
T 1wfh_A 20 VCRKRVGLT-GFMC-RCGTTFCGS 41 (64)
T ss_dssp TTCCCCCTT-CEEC-SSSCEECTT
T ss_pred hhCCccCcc-CEEe-ecCCEeccc
Confidence 355555555 8999 899999863
No 417
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=21.75 E-value=68 Score=20.42 Aligned_cols=24 Identities=21% Similarity=0.574 Sum_probs=20.3
Q ss_pred eEEcCCCCccccCCCCCCCCCCce
Q 014393 304 GYTCPRCKARVCELPTDCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP~~C~~C~l~ 327 (425)
.+.||.|+...=.--..|-.|+..
T Consensus 5 DW~C~~C~~~Nfa~r~~C~~C~~p 28 (32)
T 2lk0_A 5 DWLCNKCCLNNFRKRLKCFRCGAD 28 (32)
T ss_dssp EEECTTTCCEEETTCCBCTTTCCB
T ss_pred CCCcCcCcCCcChhcceecCCCCc
Confidence 789999999877777889999864
No 418
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=21.65 E-value=1e+02 Score=29.08 Aligned_cols=45 Identities=9% Similarity=0.134 Sum_probs=36.1
Q ss_pred CccCHHHHHHHHHhCCcEEEEEEecchHHHHHHHHHhhCCeEEEe
Q 014393 204 DPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVA 248 (425)
Q Consensus 204 dp~~i~~ti~~akk~~I~V~vIglg~e~~iLk~iA~~TGG~Y~~~ 248 (425)
.|.++.++++.+++.+|++-.+--.....+.+.||+.||+.....
T Consensus 222 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~v~~l 266 (291)
T 1pq4_A 222 SAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVELL 266 (291)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEE
Confidence 345777899999999999776665666788999999999987653
No 419
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.56 E-value=32 Score=21.96 Aligned_cols=20 Identities=30% Similarity=0.600 Sum_probs=14.8
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIH 31 (46)
T ss_dssp CEECTTSCCEESSHHHHHHH
T ss_pred CeeccccCChhcCHHHHHHH
Confidence 34566788888888888764
No 420
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=21.30 E-value=1.6e+02 Score=27.27 Aligned_cols=14 Identities=7% Similarity=0.121 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHhC
Q 014393 171 LQNALDLVQGLLSQ 184 (425)
Q Consensus 171 L~~AL~~A~~~L~~ 184 (425)
+..|+++|++.++.
T Consensus 22 ~~~g~~~a~~~iN~ 35 (356)
T 3ipc_A 22 IQKGAEQAAKDINA 35 (356)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 34445555554443
No 421
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=21.19 E-value=28 Score=26.51 Aligned_cols=24 Identities=29% Similarity=0.462 Sum_probs=15.1
Q ss_pred eEEcCCCCccccCCCC----CCCCCCce
Q 014393 304 GYTCPRCKARVCELPT----DCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP~----~C~~C~l~ 327 (425)
-.+||+|++..-.-.. .|+.||+.
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (70)
T 2js4_A 8 ILVCPVCKGRLEFQRAQAELVCNADRLA 35 (70)
T ss_dssp CCBCTTTCCBEEEETTTTEEEETTTTEE
T ss_pred heECCCCCCcCEEeCCCCEEEcCCCCce
Confidence 3678888885443222 57777765
No 422
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=21.11 E-value=28 Score=31.07 Aligned_cols=29 Identities=21% Similarity=0.413 Sum_probs=20.4
Q ss_pred ccccccccccCCCCCCCcceeCCCCCcccccccc
Q 014393 365 TCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECD 398 (425)
Q Consensus 365 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCD 398 (425)
.|..|++.+... ..+.|.|++|+.. .+|.
T Consensus 44 ACp~CnKKV~~~---~~g~~~CekC~~~--~~~~ 72 (172)
T 3u50_C 44 RCTCQGKSVLKY---HGDSFFCESCQQF--INPQ 72 (172)
T ss_dssp ECTTSCCCEEEE---TTTEEEETTTTEE--CCCE
T ss_pred hchhhCCEeeeC---CCCeEECCCCCCC--CCce
Confidence 588899888532 2357999999986 4443
No 423
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.07 E-value=43 Score=21.42 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=16.0
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 014393 317 LPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLars 337 (425)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2en9_A 11 KLFKCNECKKTFTQSSSLTVH 31 (46)
T ss_dssp CCCBCTTTCCBCSSHHHHHHH
T ss_pred CCEECCccCcccCCHHHHHHH
Confidence 345677888888888888764
No 424
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=21.01 E-value=64 Score=20.57 Aligned_cols=24 Identities=17% Similarity=0.509 Sum_probs=20.4
Q ss_pred eEEcCCCCccccCCCCCCCCCCce
Q 014393 304 GYTCPRCKARVCELPTDCRICGLQ 327 (425)
Q Consensus 304 Gy~Cp~C~s~~C~lP~~C~~C~l~ 327 (425)
++.||.|-...=..-..|.+|+..
T Consensus 8 ~W~C~~CT~~N~~~~~~Ce~C~~~ 31 (34)
T 3a9j_C 8 QWNCTACTFLNHPALIRCEQCEMP 31 (34)
T ss_dssp CEECTTTCCEECTTCSBCTTTCCB
T ss_pred cCCCCCCccccCCCCCeeCCCCCc
Confidence 789999998887777899999864
No 425
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=20.95 E-value=93 Score=24.42 Aligned_cols=63 Identities=17% Similarity=0.242 Sum_probs=38.7
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCcEEEEEE-eC-CCC----CCc---cCHHHHHHHHHhCCcEEEEEEecch
Q 014393 165 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILY-SA-LST----CDP---GDIMETIQKCKESKIRCSVIGLSAE 230 (425)
Q Consensus 165 ~~G~tsL~~AL~~A~~~L~~~p~~~sreILVI~-~s-~~t----~dp---~~i~~ti~~akk~~I~V~vIglg~e 230 (425)
|.|......||..|...+.. ++..+|-|++ ++ ... ..| .++.+.++.+.+.||+|++++-..+
T Consensus 12 p~~~~~~~~al~~a~~~~~~---~g~~~v~vff~~dgV~~~~~~~~~~~~~~~~~~l~~l~~~gv~v~~C~~~l~ 83 (117)
T 1jx7_A 12 PYGSESLFNSLRLAIALREQ---ESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTD 83 (117)
T ss_dssp TTTCSHHHHHHHHHHHHHHH---CTTCEEEEEECGGGGGGGBSCCCCSSSCCHHHHHHHHHHTTCCEEEEHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhc---CCCccEEEEEEchHHHHHhcCCCCCcCCCHHHHHHHHHHCCCEEEEeHHHHH
Confidence 33445677788888877754 1221344443 32 111 111 3667888999999999999987654
No 426
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=20.76 E-value=1e+02 Score=25.18 Aligned_cols=65 Identities=15% Similarity=0.214 Sum_probs=43.2
Q ss_pred EEEEEE-eCCCCCCccCHHHHHHHHHhCCcEEEEEEecc----hHHHHHHHHHhhCCeEEEecCH-hHHHHHHHh
Q 014393 192 EVLILY-SALSTCDPGDIMETIQKCKESKIRCSVIGLSA----EMFICKHLCQDTGGSYSVALDE-SHFKELIME 260 (425)
Q Consensus 192 eILVI~-~s~~t~dp~~i~~ti~~akk~~I~V~vIglg~----e~~iLk~iA~~TGG~Y~~~~d~-~~L~~lL~~ 260 (425)
+++||. |+. .+...++++.++++||++.+|-+.. +...+.++++.++-...+-.+. ..|-.++..
T Consensus 15 dv~iv~~Gs~----~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvvE~~~~G~l~~~i~~ 85 (118)
T 3ju3_A 15 DITFVTWGSQ----KGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESNYTAQAAQMIKL 85 (118)
T ss_dssp SEEEEEEGGG----HHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCCCCCCCCCHHHHHHH
T ss_pred CEEEEEECcc----HHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCEEEEEECCCCCcHHHHHHH
Confidence 466664 442 2456788999999999999999985 4567788887666554443332 445555443
No 427
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=20.72 E-value=58 Score=23.35 Aligned_cols=32 Identities=28% Similarity=0.707 Sum_probs=21.5
Q ss_pred EEc--CCCCcccc--------------CCCCCCCC--CCceecCchhHHh
Q 014393 305 YTC--PRCKARVC--------------ELPTDCRI--CGLQLVSSPHLAR 336 (425)
Q Consensus 305 y~C--p~C~s~~C--------------~lP~~C~~--C~l~Lvs~phLar 336 (425)
|.| +.|+..|- +-|-.|+. |+..+.+...|.+
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~ 51 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR 51 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHH
T ss_pred ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHH
Confidence 677 66766553 34557777 8888877777765
No 428
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.63 E-value=45 Score=21.32 Aligned_cols=21 Identities=33% Similarity=0.599 Sum_probs=16.0
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 014393 317 LPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLars 337 (425)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2emz_A 11 RPFKCNECGKGFGRRSHLAGH 31 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHH
Confidence 355778889888888888764
No 429
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.41 E-value=45 Score=21.34 Aligned_cols=21 Identities=14% Similarity=0.409 Sum_probs=16.4
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 014393 317 LPTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 317 lP~~C~~C~l~Lvs~phLars 337 (425)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2eom_A 11 RGHRCSDCGKFFLQASNFIQH 31 (46)
T ss_dssp SSCCCSSSCCCCSSHHHHHHH
T ss_pred CCcCCCCCCCeeCChHHHHHH
Confidence 355788899999988888764
No 430
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.39 E-value=30 Score=21.90 Aligned_cols=20 Identities=30% Similarity=0.615 Sum_probs=14.4
Q ss_pred CCCCCCCCceecCchhHHhh
Q 014393 318 PTDCRICGLQLVSSPHLARS 337 (425)
Q Consensus 318 P~~C~~C~l~Lvs~phLars 337 (425)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H 31 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRH 31 (44)
T ss_dssp CEEETTTTEEESSSHHHHTT
T ss_pred CeECcccCcccCCHHHHHHH
Confidence 34566788888888888764
No 431
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=20.02 E-value=3e+02 Score=28.40 Aligned_cols=61 Identities=13% Similarity=0.183 Sum_probs=47.1
Q ss_pred EEEEEeCCCCCCccCHH-HHHHHHHh-----CCcEEEEEEecchHHHHHHHHHhhCCeEEEecCHhHHHHHH
Q 014393 193 VLILYSALSTCDPGDIM-ETIQKCKE-----SKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELI 258 (425)
Q Consensus 193 ILVI~~s~~t~dp~~i~-~ti~~akk-----~~I~V~vIglg~e~~iLk~iA~~TGG~Y~~~~d~~~L~~lL 258 (425)
=|.|+||- |+|= +|++-+++ .+.+|..++-|..+..|.+.+.+-+=.|.+..|+....++-
T Consensus 79 ~I~ILGST-----GSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~v~v~d~~~~~~L~ 145 (488)
T 3au8_A 79 NVAIFGST-----GSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELK 145 (488)
T ss_dssp EEEEETTT-----SHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSEEEESCGGGTHHHH
T ss_pred EEEEEccC-----cHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCEEEEcCHHHHHHHH
Confidence 35566652 4553 57777777 57888888888899999999999999999998887765553
Done!