BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014396
(425 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8K174|TMM60_MOUSE Transmembrane protein 60 OS=Mus musculus GN=Tmem60 PE=2 SV=1
Length = 133
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 24 LLLVLKLDHVISYSWWIVFFPVWIFHAVV---------ARGRFSLPAPSVPHNRHWAPCH 74
++LVLKLD ++W+++F PVWIF ++ R + HN
Sbjct: 21 IMLVLKLDEKAPWNWFLIFIPVWIFDTILLVMLIVKMAGRCKSGFDPRHGSHNIK-KKAW 79
Query: 75 AIVATPLLIAFELLLCIYLESIYEHGFEAVNLKIVFLPLLA 115
++A L +AF L LC LE F +NL VF+PL A
Sbjct: 80 YLIAMLLKLAFCLALCAKLEQ-----FTTMNLSYVFIPLWA 115
>sp|Q9H2L4|TMM60_HUMAN Transmembrane protein 60 OS=Homo sapiens GN=TMEM60 PE=2 SV=1
Length = 133
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 24 LLLVLKLDHVISYSWWIVFFPVWIFHAVV---------ARGRFSLPAPSVPHNRHWAPCH 74
++LVLKLD ++W+++F PVWIF ++ R + HN
Sbjct: 21 IMLVLKLDEKAPWNWFLIFIPVWIFDTILLVLLIVKMAGRCKSGFDPRHGSHNIK-KKAW 79
Query: 75 AIVATPLLIAFELLLCIYLESIYEHGFEAVNLKIVFLPLLA 115
++A L +AF L LC LE F +NL VF+PL A
Sbjct: 80 YLIAMLLKLAFCLALCAKLEQ-----FTTMNLSYVFIPLWA 115
>sp|P98170|XIAP_HUMAN E3 ubiquitin-protein ligase XIAP OS=Homo sapiens GN=XIAP PE=1 SV=2
Length = 497
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 376 QSEITNYSRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
Q EI+ + ++ RLQ EK LC++C + +I++V +PC H + C+
Sbjct: 432 QKEIS--TEEQLRRLQEEK-LCKICMDRNIAIVFVPCGHLVTCK 472
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 385 QEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
++ RLQ E+ C+VC + ++S+V +PC H ++CR
Sbjct: 546 EQLRRLQEERT-CKVCMDKEVSIVFIPCGHLVVCR 579
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 38.9 bits (89), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 385 QEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
++ RLQ E+ C+VC + ++SVV +PC H ++C+
Sbjct: 560 EQLRRLQEERT-CKVCMDKEVSVVFIPCGHLVVCQ 593
>sp|Q60989|XIAP_MOUSE E3 ubiquitin-protein ligase XIAP OS=Mus musculus GN=Xiap PE=1 SV=2
Length = 496
Score = 38.9 bits (89), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 376 QSEITNYSRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
Q +I+ + ++ RLQ EK LC++C + +I++V +PC H + C+
Sbjct: 431 QKDIS--TEEQLRRLQEEK-LCKICMDRNIAIVFVPCGHLVTCK 471
>sp|Q13489|BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens
GN=BIRC3 PE=1 SV=2
Length = 604
Score = 38.9 bits (89), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 385 QEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
++ RLQ E+ C+VC + ++S+V +PC H ++C+
Sbjct: 546 EQLRRLQEERT-CKVCMDKEVSIVFIPCGHLVVCK 579
>sp|Q9R0I6|XIAP_RAT E3 ubiquitin-protein ligase XIAP OS=Rattus norvegicus GN=Xiap PE=2
SV=1
Length = 496
Score = 38.9 bits (89), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 376 QSEITNYSRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
Q +I+ + ++ RLQ EK LC++C + +I++V +PC H + C+
Sbjct: 431 QKDIS--TEEQLRRLQEEK-LCKICMDRNIAIVFVPCGHLVTCK 471
>sp|Q90660|BIR_CHICK Inhibitor of apoptosis protein OS=Gallus gallus GN=ITA PE=2 SV=1
Length = 611
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 385 QEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
++ RLQ E+ C+VC + ++S+V +PC H ++C+
Sbjct: 553 EQLRRLQEERT-CKVCMDKEVSIVFIPCGHLVVCK 586
>sp|O62640|PIAP_PIG Putative inhibitor of apoptosis OS=Sus scrofa GN=PIAP PE=2 SV=1
Length = 358
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 385 QEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
++ RLQ E+ C+VC + ++S+V +PC H ++C+
Sbjct: 300 EQLRRLQEERT-CKVCMDKEVSIVFIPCGHLVVCK 333
>sp|O08863|BIRC3_MOUSE Baculoviral IAP repeat-containing protein 3 OS=Mus musculus
GN=Birc3 PE=1 SV=2
Length = 600
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 385 QEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
++ +LQ E+ +C+VC + ++S+V +PC H ++C+
Sbjct: 542 EQLRKLQEER-MCKVCMDREVSIVFIPCGHLVVCK 575
>sp|Q95M72|BIRC8_PANTR Baculoviral IAP repeat-containing protein 8 OS=Pan troglodytes
GN=BIRC8 PE=2 SV=1
Length = 236
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 376 QSEITNYSRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
Q EI+ + RLQ+EK LC++C + I+VV +PC H + C+
Sbjct: 171 QREIS--PEEPLRRLQDEK-LCKICMDRHIAVVFIPCGHLVTCK 211
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 385 QEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
++ RLQ E+ C+VC + ++S+V +PC H ++C+
Sbjct: 554 EQLRRLQEERT-CKVCMDREVSIVFIPCGHLVVCQ 587
>sp|Q95M71|BIRC8_GORGO Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla
gorilla GN=BIRC8 PE=2 SV=1
Length = 236
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 376 QSEITNYSRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
Q EI+ + RLQ EK LC++C + I+VV +PC H + C+
Sbjct: 171 QREIS--PEEPLRRLQEEK-LCKICMDRHIAVVFIPCGHLVTCK 211
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 7/51 (13%)
Query: 374 GQQSEITNYS------RQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILC 418
G++SE S ++ +RL+ E+ +C+VC + D+S++ +PC H ++C
Sbjct: 270 GERSEPPKVSGPPLSTEEQLQRLKEER-MCKVCMDKDVSMLFVPCGHLVVC 319
>sp|Q96P09|BIRC8_HUMAN Baculoviral IAP repeat-containing protein 8 OS=Homo sapiens
GN=BIRC8 PE=1 SV=2
Length = 236
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 376 QSEITNYSRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
Q EI+ + RLQ EK LC++C + I+VV +PC H + C+
Sbjct: 171 QREIS--PEEPLRRLQEEK-LCKICMDRHIAVVFIPCGHLVTCK 211
>sp|A9JTP3|BIRC7_XENTR Baculoviral IAP repeat-containing protein 7 OS=Xenopus tropicalis
GN=birc7 PE=2 SV=1
Length = 365
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 383 SRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILC 418
S +E R E+ +C+VC + D+S+V +PC H ++C
Sbjct: 304 STEEQLRQLKEERMCKVCMDNDVSMVFVPCGHLVVC 339
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 383 SRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILC 418
+ ++ RL+ E+ +C+VC + D+S++ +PC H ++C
Sbjct: 341 TEEQLRRLKEER-MCKVCMDKDVSMLFVPCGHLVVC 375
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 330 EDQARLVHENSSGYNTFCGYPPEVVKKMPKKELAEE----VWRLQAALGQQSEIT---NY 382
E A + + + P V +P K A E + ++ + + S T N
Sbjct: 377 EPSAPFIEPCQATTSKAASVPIPVADSIPAKPQAAEAVANISKITDEIQKMSVATPNGNL 436
Query: 383 SRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILCR 419
S +E R + LC+VC + ++ VV LPC H C
Sbjct: 437 SLEEENRQLKDARLCKVCLDEEVGVVFLPCGHLATCN 473
>sp|Q8RX22|MIP1_ARATH MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1
SV=1
Length = 711
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 14/58 (24%)
Query: 361 ELAEEVWRLQAALGQQSEITNYSRQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILC 418
+L EE+ +L+ + ++ NY R+ C +C + ++SVV LPC H+++C
Sbjct: 631 KLLEEIDKLEGSYDNEA---NYDRE-----------CIICMKDEVSVVFLPCAHQVVC 674
>sp|Q5VWK5|IL23R_HUMAN Interleukin-23 receptor OS=Homo sapiens GN=IL23R PE=1 SV=3
Length = 629
Score = 35.4 bits (80), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 201 WSNPVIHRSPQTRPATSSSAITYLDWNSGLVVSA 234
WS+ H++P+T P +S A + WNSGL V++
Sbjct: 307 WSSLFFHKTPETVPQVTSKAFQHDTWNSGLTVAS 340
>sp|Q6AYH3|RNF34_RAT E3 ubiquitin-protein ligase RNF34 OS=Rattus norvegicus GN=Rnf34
PE=1 SV=1
Length = 381
Score = 35.4 bits (80), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 361 ELAEEVWRLQAALGQQSEITNYSRQEFERLQNEK--VLCRVCFEGDISVVLLPCRHRILC 418
EL E+V RL +++E S E +LQ+E+ LCR+C + I VLL C H + C
Sbjct: 300 ELVEKVNRLY----KENEENQKSYGERMQLQDEEDDSLCRICMDAVIDCVLLECGHMVTC 355
>sp|Q99KR6|RNF34_MOUSE E3 ubiquitin-protein ligase RNF34 OS=Mus musculus GN=Rnf34 PE=1
SV=1
Length = 376
Score = 35.4 bits (80), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 361 ELAEEVWRLQAALGQQSEITNYSRQEFERLQNEK--VLCRVCFEGDISVVLLPCRHRILC 418
EL E+V RL +++E S E +LQ+E+ LCR+C + I VLL C H + C
Sbjct: 295 ELVEKVNRLY----KENEENQKSYGERMQLQDEEDDSLCRICMDAVIDCVLLECGHMVTC 350
>sp|Q5BKL8|XIAP_XENTR E3 ubiquitin-protein ligase XIAP OS=Xenopus tropicalis GN=xiap PE=2
SV=1
Length = 492
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
Query: 348 GYPPEVVKKMPKKEL--------------AEEVWRLQAALGQQSEITNYSRQEFERLQNE 393
G+P E +KK+ ++L ++ + + L + EI ++ +L+ E
Sbjct: 383 GFPLEEIKKVMGQKLKTTGKNYTCVEEFVSDLCAQKETVLEKPKEIEISLEEKLRQLEEE 442
Query: 394 KVLCRVCFEGDISVVLLPCRHRILC 418
K+ C+VC + IS+V +PC H + C
Sbjct: 443 KI-CKVCMDRRISIVFIPCGHLVAC 466
>sp|Q5E9J6|RNF34_BOVIN E3 ubiquitin-protein ligase RNF34 OS=Bos taurus GN=RNF34 PE=2 SV=1
Length = 375
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 361 ELAEEVWRLQAALGQQSEITNYSRQEFERLQNEK--VLCRVCFEGDISVVLLPCRHRILC 418
EL E+V RL +++E S E +LQ+E+ LCR+C + I VLL C H + C
Sbjct: 294 ELVEKVNRLY----KENEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTC 349
>sp|Q1RMT9|P3IP1_BOVIN Phosphoinositide-3-kinase-interacting protein 1 OS=Bos taurus
GN=PIK3IP1 PE=2 SV=1
Length = 261
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 16/113 (14%)
Query: 183 LFINFGIAECFAFLVCTKWSNPVIHRSPQTRPATSSSAITYLDWNSGLVVSAEE------ 236
L N +AE + C W N ++R+ Q PA S + +LD SGL + E
Sbjct: 10 LVSNMLLAEAYGSGGCF-WDNGHLYRADQPSPAPGHSCLNWLDAQSGLAFAPESGAGNHS 68
Query: 237 -----EQNPDGM-CGLSDIGGHIMKVPVIGFQVLLCMHLEGVGVVFSTTRLVE 283
+Q+P G C +S G K P Q L C G+ S T E
Sbjct: 69 YCRNPDQDPRGPWCYVSGEAGAPEKRPC---QDLRCPDTTSQGLPTSATETEE 118
>sp|Q969K3|RNF34_HUMAN E3 ubiquitin-protein ligase RNF34 OS=Homo sapiens GN=RNF34 PE=1
SV=1
Length = 372
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 361 ELAEEVWRLQAALGQQSEITNYSRQEFERLQNEK--VLCRVCFEGDISVVLLPCRHRILC 418
EL E+V RL +++E S E +LQ+E+ LCR+C + I VLL C H + C
Sbjct: 291 ELVEKVNRLY----KENEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTC 346
>sp|Q5NVC7|RNF34_PONAB E3 ubiquitin-protein ligase RNF34 OS=Pongo abelii GN=RNF34 PE=2
SV=2
Length = 372
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 361 ELAEEVWRLQAALGQQSEITNYSRQEFERLQNEK--VLCRVCFEGDISVVLLPCRHRILC 418
EL E+V RL +++E S E +LQ+E+ LCR+C + I VLL C H + C
Sbjct: 291 ELVEKVNRLY----KENEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTC 346
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 361 ELAEEVWRLQAALG--QQSEITNYSRQEFERL---QNEKVLCRVCFEGDISVVLLPCRHR 415
E EEV R A G Q +E + Q+ +L Q E+ C +C + +V+LLPCRH
Sbjct: 330 EAEEEVIRTAPARGREQLNEDEPAAGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHL 389
Query: 416 ILCR 419
LC+
Sbjct: 390 CLCQ 393
>sp|Q7KWT1|T185L_DICDI Transmembrane protein 185-like OS=Dictyostelium discoideum
GN=DDB_G0276293 PE=3 SV=1
Length = 490
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 3 WRRVLKSVQAVAAHSLLLTFTLLLVLKLDHVISYSWWIVFFPVWIFHA 50
WR V +Q + S++ FT+ + L +D I +S+WI+F PV++ A
Sbjct: 180 WRIVGSILQIIGLSSIV--FTIFIGLYIDGYIDWSYWILFIPVYVILA 225
>sp|Q9BY78|RNF26_HUMAN RING finger protein 26 OS=Homo sapiens GN=RNF26 PE=2 SV=1
Length = 433
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 280 RLVEKIVILLRSGAGTGIYFRISSRAHDCFGFLHRGSRLLGWWSIDEGSREDQARLVHEN 339
RL E ++ L R G+ + R+ SR+ + +RG G +G D R+
Sbjct: 269 RLREDVMRLSRLALGSEAWRRVWSRSLQLASWPNRG----GAPGAPQG---DPMRVFSVR 321
Query: 340 SSGYNTFCGYPPEVVKKMPKKELAEEVWRLQAALGQQ--SEITNYSRQEFERL---QNEK 394
+ +T PE ++ +E R+ G++ +E Q+ +L Q E+
Sbjct: 322 TRRQDTL----PEAGRRSEAEEEEARTIRVTPVRGRERLNEEEPPGGQDPWKLLKEQEER 377
Query: 395 VLCRVCFEGDISVVLLPCRHRILCR 419
C +C + +V+LLPCRH LC+
Sbjct: 378 KKCVICQDQSKTVLLLPCRHLCLCQ 402
>sp|A5D8Q0|XIAP_XENLA E3 ubiquitin-protein ligase XIAP OS=Xenopus laevis GN=xiap PE=2
SV=2
Length = 488
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 384 RQEFERLQNEKVLCRVCFEGDISVVLLPCRHRILC 418
++ +L+ EKV C+VC + I++V +PC H + C
Sbjct: 429 EEKLRQLEEEKV-CKVCMDRRITIVFIPCGHLVAC 462
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 354 VKKMPKKELAEEV-WRLQAALGQQSEITNYSRQEFERLQNEKV----LCRVCFEGDISVV 408
VK + +K++ + V + LQ G I N + QE + ++E C VC +
Sbjct: 232 VKPLKQKQIVDRVSYLLQEIYG----IENRNNQETKSTEDENSDNSSECVVCLSDLRDTL 287
Query: 409 LLPCRHRILCR 419
+LPCRH LC
Sbjct: 288 ILPCRHLCLCN 298
>sp|P41435|IAP1_NPVAC Apoptosis inhibitor 1 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 286
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 393 EKVLCRVCFEGDISVVLLPCRHRILC 418
EK C+VC E VL+PCRH +C
Sbjct: 234 EKYECKVCLERQRDAVLMPCRHFCVC 259
>sp|A1L020|MEX3A_HUMAN RNA-binding protein MEX3A OS=Homo sapiens GN=MEX3A PE=1 SV=1
Length = 520
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 397 CRVCFEGDISVVLLPCRHRILC 418
C VCFE +++ L+PC H + C
Sbjct: 469 CMVCFESEVTAALVPCGHNLFC 490
>sp|P41454|IAP2_NPVAC Probable apoptosis inhibitor 2 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP2 PE=4 SV=1
Length = 249
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 397 CRVCFEGDISVVLLPCRHRILC 418
C+VCF+ + SV +PCRH +C
Sbjct: 202 CKVCFDREKSVCFMPCRHLAVC 223
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 32.3 bits (72), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 354 VKKMPKKELAEEV-WRLQAALGQQSEITNYSRQEFERLQNEKVLCRVCFEGDISVVLLPC 412
VK + +K++ + V + LQ G +++ ++ + + C VC ++LPC
Sbjct: 235 VKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPC 294
Query: 413 RHRILC 418
RH LC
Sbjct: 295 RHLCLC 300
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 32.3 bits (72), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 354 VKKMPKKELAEEV-WRLQAALGQQSEITNYSRQEFERLQNEKVLCRVCFEGDISVVLLPC 412
VK + +K++ + V + LQ G +++ ++ + + C VC ++LPC
Sbjct: 234 VKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPC 293
Query: 413 RHRILC 418
RH LC
Sbjct: 294 RHLCLC 299
>sp|Q08DE2|T185A_BOVIN Transmembrane protein 185B OS=Bos taurus GN=TMEM185B PE=2 SV=1
Length = 350
Score = 32.3 bits (72), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 24 LLLVLKLDHVISYSWWIVFFPVWI---------FHAVVARGRFSLPAPSVPHNRH----W 70
+ + L+LD +I + W +VF P+WI + +V F V R
Sbjct: 154 IFIALRLDRIIHWPWLVVFVPLWILMSFLCLVVLYYIVWSLLFLRSLDVVAEQRRTHVTM 213
Query: 71 APCHAIVATPLLIAFELLLCIYLESIYEHGFEAVNLKIVFLPLLAFEITILIDNFR 126
A C + PLLI FE+LL L+ G + +F+PL IT++ FR
Sbjct: 214 AICWITIVVPLLI-FEVLLVHRLD-----GHNMFSYISIFVPLWLSLITLMATTFR 263
>sp|O10324|IAP2_NPVOP Probable apoptosis inhibitor 2 OS=Orgyia pseudotsugata multicapsid
polyhedrosis virus GN=IAP2 PE=4 SV=1
Length = 236
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 397 CRVCFEGDISVVLLPCRHRILC 418
C+VCF + SV LPCRH ++C
Sbjct: 189 CKVCFVNEKSVCFLPCRHLVVC 210
>sp|Q0WPJ7|RF298_ARATH Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana
GN=RF298 PE=2 SV=1
Length = 814
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 397 CRVCFEGDISVVLLPCRHRILC 418
C +C ++SV+ LPC H++LC
Sbjct: 760 CVMCLSEEMSVIFLPCAHQVLC 781
>sp|Q9ZVT8|RF4_ARATH Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana
GN=RF4 PE=3 SV=1
Length = 823
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 397 CRVCFEGDISVVLLPCRHRILC 418
C +C ++SV+ LPC H++LC
Sbjct: 768 CVMCLSEEMSVIFLPCAHQVLC 789
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.141 0.461
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,270,543
Number of Sequences: 539616
Number of extensions: 6888970
Number of successful extensions: 17297
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 17229
Number of HSP's gapped (non-prelim): 88
length of query: 425
length of database: 191,569,459
effective HSP length: 120
effective length of query: 305
effective length of database: 126,815,539
effective search space: 38678739395
effective search space used: 38678739395
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)