BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014397
(425 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225461628|ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein VITISV_017556 [Vitis vinifera]
Length = 449
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 307/454 (67%), Positives = 349/454 (76%), Gaps = 34/454 (7%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESV 60
MD+ KKRK+DENG V +D +S +L P+DARKI+E DQLL++L +A RH DVL+++
Sbjct: 1 MDATKKRKMDENGLVSTDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDAI 60
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
RSIAD D TQRKLFIRGLGWDTTTEGLR +FSAYGELEEAVVILDK T KSKGYGF+TFK
Sbjct: 61 RSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFK 120
Query: 121 HIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTN-NPVDVSLRKIFVGNVPNDMSADK 179
H+DGA+LALKEPSKKIDGR+TVT LA +G SG ++N + VDVS+RKI+V NVP DM AD+
Sbjct: 121 HVDGALLALKEPSKKIDGRMTVTQLAASGLSGPASNASAVDVSMRKIYVANVPVDMPADR 180
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
LLAHF+ YGEIEEGPLGFDKQTGK +GFALFVYKTAE AQAALVDP K +DG+QL C+LA
Sbjct: 181 LLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLA 240
Query: 240 -DNKKAKPMGPD---GGGPGNVSMNHGDGMGM-----VPPSAGGSY-GGPGG---HGYPF 286
+ KK K GP G PG HGDG+G+ +P S G Y GGPGG +G
Sbjct: 241 IEGKKGKTGGPAQAPTGVPGEA--GHGDGLGVPPQGSMPGSLGSQYPGGPGGISAYGGFS 298
Query: 287 SGPPPLGHH--LNSSL-----GGPG---QVPSSMGGVGAGGYGAGLGGPYGG--YGGPGS 334
GPPPLGHH LNSSL GGPG QVPSS+G G+ GYGAGLGGPYG YGGP S
Sbjct: 299 GGPPPLGHHHPLNSSLPSSLGGGPGLSSQVPSSLG--GSAGYGAGLGGPYGSAHYGGPNS 356
Query: 335 TGYG---GLGGAGGGAGAGGALGGAAGGLGGGSSLYRLPPSSAGMPSGGYPEAGHYGLSS 391
GY G GG GG AGA G GGA G GGGSSLYRLPPS+ GMPSGGYP++GHY LSS
Sbjct: 357 AGYSGLGGAGGLGGAAGALGVAGGALGVAGGGSSLYRLPPSTVGMPSGGYPDSGHYSLSS 416
Query: 392 TSAGYPSQHHQAAGTSPVPRVPPGGMYPNVPPYY 425
+SA YPSQ HQ AGTSPVPRVPPGGMYP+ PPYY
Sbjct: 417 SSA-YPSQIHQPAGTSPVPRVPPGGMYPSGPPYY 449
>gi|449438887|ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
gi|449483196|ref|XP_004156519.1| PREDICTED: uncharacterized protein LOC101231665 [Cucumis sativus]
Length = 434
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 278/443 (62%), Positives = 319/443 (72%), Gaps = 27/443 (6%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESV 60
MD KKR++DENG V S S +R+TP+DARKI++R T DQL+D+L AV+RH DVL++V
Sbjct: 1 MDVTKKRRMDENG-VDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAV 59
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
RSIAD D +QRKLFIRGL DT+TEGLRS+FS+YGELEEAVVI+DKATGKSKGYGF+TFK
Sbjct: 60 RSIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFK 119
Query: 121 HIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKL 180
H+DGA+LALKEPSK IDGRVTVT LA G SG ++ N D+SLRKI+V NVP DM ADKL
Sbjct: 120 HVDGALLALKEPSKTIDGRVTVTQLAAVGISGQNS-NAADLSLRKIYVANVPMDMPADKL 178
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
LAHF+ YGEIEEGPLGFDKQTGK +G+ALFVYK EGAQAALVDPIKT+DG+QL+C+ A+
Sbjct: 179 LAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFAN 238
Query: 241 NKKAKPMG-------PDGGGPGNVSMNHGDGMGMVPPSA------GGSYGGPGGHGYPFS 287
+ K G G G GNV HGDGM M PPSA G G FS
Sbjct: 239 DGKKGKPGGGPDGNQTQGAGQGNV---HGDGMPMAPPSAMPGSGGQYGGPGGMGSYGGFS 295
Query: 288 ----GPPPLGHH-LNSSLGGPGQVPSSMGGVGAGGYGAGLGGPYGGYGGPGSTGYGGLGG 342
G PL HH LNSS+ GPG SS+GG G+ G G YGG GG
Sbjct: 296 SGLQGAQPLAHHPLNSSM-GPGL--SSVGGQAPSSLGSSGGYGGGPYGGGYGGPGSIYGG 352
Query: 343 AGGGAGAGGALGGAAGGLGGGSSLYRLPPSSAGMPSGGYPEAGHYGLSSTSAGYPSQHHQ 402
G G G GG GG GG SSLYRLP SS GMPSGGYP++GHY +SS S G+P+QHHQ
Sbjct: 353 MGSVGGGLGGSGGGLGGAGGASSLYRLPQSSVGMPSGGYPDSGHYSMSSAS-GHPNQHHQ 411
Query: 403 AAGTSPVPRVPPGGMYPNVPPYY 425
AGTSP PRVPPGGMYPNVPPYY
Sbjct: 412 PAGTSPAPRVPPGGMYPNVPPYY 434
>gi|297853100|ref|XP_002894431.1| hypothetical protein ARALYDRAFT_892356 [Arabidopsis lyrata subsp.
lyrata]
gi|297340273|gb|EFH70690.1| hypothetical protein ARALYDRAFT_892356 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 266/437 (60%), Positives = 306/437 (70%), Gaps = 29/437 (6%)
Query: 1 MDSIKKRKIDENGA-VLSDL---ESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDV 56
MD +KKRK+DENG +L+D +RL PQDARKI+ER ++DQLLD+L AV RH DV
Sbjct: 1 MDMLKKRKLDENGIGMLNDGINGSVSSRLMPQDARKIIERFSTDQLLDILQEAVVRHTDV 60
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
LE VR AD+D +QRKLFIRGL +TTTEGLRS+FS YG+L+EA+VILDK T KSKGYGF
Sbjct: 61 LEIVRLTADSDISQRKLFIRGLAAETTTEGLRSLFSNYGDLDEAIVILDKVTAKSKGYGF 120
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
+TFKH+DGA+LALKEPSKKIDGRVTVT LA AGN G + ++ D+S+RKI+V NVP DM
Sbjct: 121 VTFKHVDGALLALKEPSKKIDGRVTVTQLAAAGNQGTTNSHVSDISMRKIYVANVPFDMP 180
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
AD+LL F YG+IEEGPLGFDK TGK +GFALFVYKTAEGAQAAL +P+K VDGK L C
Sbjct: 181 ADRLLNQFLAYGDIEEGPLGFDKITGKSRGFALFVYKTAEGAQAALAEPMKVVDGKNLQC 240
Query: 237 RLA-DNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLG-- 293
+LA D KK KP G DGG HGDGMGMVPP G G G G
Sbjct: 241 KLAIDGKKGKPPGQDGGAGVGHGHGHGDGMGMVPPPGPYGAAGGGHGGPGGLGNYGGYSG 300
Query: 294 ----HHLNSSLGGPGQVPSSMG-GVGAGGYGAGLGGPYGGYGGPGSTGYGGLGGAGGGAG 348
HH+NS+ PSSMG G GGYG+ G Y GYG S GY G GAG
Sbjct: 301 GPAPHHMNST-------PSSMGVGTATGGYGSVYGSHYSGYGAE-SAGY-----GGLGAG 347
Query: 349 AGGALGGAAGGLGGGSSLYRLPPSSAGMPSGGYPEAGHYGLSSTSAGYPSQHHQAAGTSP 408
+ G GG GG G GS YR+PP+S M GGYPE+GHYG SS SA YP+Q HQ G+SP
Sbjct: 348 SMGGTGGGYGGPGTGSRPYRMPPTS--MSGGGYPESGHYGHSSASA-YPAQ-HQPVGSSP 403
Query: 409 VPRVPPGGMYPNVPPYY 425
VPRVP GGMYPNVPP Y
Sbjct: 404 VPRVPLGGMYPNVPPNY 420
>gi|356545259|ref|XP_003541062.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 437
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/322 (64%), Positives = 250/322 (77%), Gaps = 24/322 (7%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESV 60
MD KKRK+DENG + +D P +L+P DARK++ER T+DQLLD+L VARH DVL +V
Sbjct: 1 MDPTKKRKLDENGFINNDSSEPLKLSPSDARKLIERFTTDQLLDILQDTVARHPDVLAAV 60
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
R+++D D +QRKLFIRGLGWDTTT+GLRS+FS YG+LEEAVVILDKATGKSKGYGF+TF+
Sbjct: 61 RAVSDPDVSQRKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYGFVTFR 120
Query: 121 HIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKL 180
H+DGA+LAL+EPSK+IDGRVTVT LA AGNS + N VDV+LRKI+V NVP D+ ADKL
Sbjct: 121 HVDGALLALREPSKRIDGRVTVTQLAAAGNSALNANA-VDVALRKIYVANVPPDLPADKL 179
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA- 239
LAHF+ YGEIEEGPLGFDKQTGK KGFALFVYK+ EGA+AAL+DP+KTV+G+QL+C+LA
Sbjct: 180 LAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAKAALIDPMKTVEGRQLSCKLAI 239
Query: 240 -DNKKAKPMGPDGGGP--GNVSMNHGDGMGM---VPPSAG-----GSYGGPGGHG----- 283
D K+ K GPD G GNV HGDG+G +PP++G G YGGPG +G
Sbjct: 240 TDGKQGKRSGPDSGQAHHGNVQHGHGDGVGAGMGIPPNSGSGSGPGQYGGPGHYGPTVGM 299
Query: 284 ---YPFSGPPPLG---HHLNSS 299
F G PP+G H LNSS
Sbjct: 300 GSYGGFGGQPPMGNNNHPLNSS 321
>gi|356517062|ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 425
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/279 (68%), Positives = 230/279 (82%), Gaps = 8/279 (2%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESV 60
MD KKRK+DENG +D P +L+P + RK++ER TSDQLLD+L AVARH DVL +V
Sbjct: 1 MDPTKKRKLDENGFNNNDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLDVLAAV 60
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
R++AD D +QRKLFIRGLGWDTTT+GLRS+FS +G+LEEAVVILDKATGKSKGYGF+TF+
Sbjct: 61 RAVADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFR 120
Query: 121 HIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKL 180
H+DGA+LAL+EPSK+IDGRVTVT LA AGNS ++ NP DV+LRKI+V NVP D+ ADKL
Sbjct: 121 HVDGALLALREPSKRIDGRVTVTQLAAAGNSASNV-NPADVALRKIYVANVPPDLPADKL 179
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA- 239
LAHF+ YGEIEEGPLGFDKQTGK KGFALFVYK+ EGAQAAL+DP+KTV+G+QL+C+LA
Sbjct: 180 LAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSCKLAI 239
Query: 240 -DNKKAKPMGPDGGGP--GNVSMNHGDGMGM---VPPSA 272
D K+ K +GPD GNV HGDG+G +PP+A
Sbjct: 240 TDGKQGKRVGPDSAQAHHGNVQHGHGDGVGAGMGMPPNA 278
>gi|224061320|ref|XP_002300424.1| predicted protein [Populus trichocarpa]
gi|222847682|gb|EEE85229.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/248 (72%), Positives = 212/248 (85%), Gaps = 9/248 (3%)
Query: 1 MDSIKKRKIDENGAVLS--DLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
MD KKRK++ENG V S DL+SP +LTPQDARK++ER T DQLLD+L +AV RH D+LE
Sbjct: 1 MDPTKKRKLEENGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDILE 60
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
+VRSIAD D TQRKLFIRGLGW+TTTE LR++FS YGELEEAVVILDK TGKSKGYGF+
Sbjct: 61 AVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVI 120
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-------VDVSLRKIFVGNV 171
+KH+DGA+LALKEPSKKIDGRVTVT LA+AGNSG + NN VDV++RKI+V NV
Sbjct: 121 YKHVDGALLALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANV 180
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P +M +DKLL HFA YGEIEEGPLGFDKQTGK KGFALFVYKTAEGAQAAL++P+K ++G
Sbjct: 181 PYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEG 240
Query: 232 KQLNCRLA 239
+QLNC+LA
Sbjct: 241 RQLNCKLA 248
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 67/190 (35%), Gaps = 47/190 (24%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + RK+F+ + + + + L F+ YGE+EE + DK TGK KG+ +YK +GA
Sbjct: 69 DATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVIYKHVDGAL 128
Query: 220 AALVDPIKTVDGKQLNCRLADN----------------------KKAKPMGPDGGGPGNV 257
AL +P K +DG+ +LA +K P +
Sbjct: 129 LALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANVPYEMPSDK 188
Query: 258 SMNHGDGMGMVPP-------SAGGS-------YGGPGGHGYPFSGPPPL--GHHLNSSLG 301
+NH G + G S Y G P + G LN L
Sbjct: 189 LLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEGRQLNCKLA 248
Query: 302 ---------G 302
G
Sbjct: 249 IDGKRGRQPG 258
>gi|297830052|ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
lyrata]
gi|297328748|gb|EFH59167.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
lyrata]
Length = 404
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/324 (62%), Positives = 232/324 (71%), Gaps = 29/324 (8%)
Query: 1 MDSIKKRKIDENGAVLSDLES----PNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDV 56
MD +KKRK+DENG L P RLTPQDARKI+ER T+DQLLD+L A+ RH DV
Sbjct: 1 MDMMKKRKLDENGGGLITNGGGIIGPTRLTPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
L+SVRS AD+D +QRKLFIRGL DTTTEGL S+FS YG+LEEA+VILDK TGKSKGYGF
Sbjct: 61 LDSVRSTADSDISQRKLFIRGLAADTTTEGLLSLFSNYGDLEEAIVILDKVTGKSKGYGF 120
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
+TF H+DGA+LALKEPSKKIDGRVTVT LA +GN G + D+S+RKI+V NVP DM
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQI-ADISMRKIYVANVPFDMP 179
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
AD+LL HF YG++EEGPLGFDK TGK +GFALFVYKTAEGAQ AL DP+K +DGK LNC
Sbjct: 180 ADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQTALADPVKVIDGKHLNC 239
Query: 237 RLADNKKAK------PMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGH----GYPF 286
+LA + K P DGG HGD MGMV P+ G YG GG GY
Sbjct: 240 KLAVDGKKGGGKPGMPQAQDGG--SGHGHVHGDVMGMVRPA--GPYGAAGGMSAYGGYS- 294
Query: 287 SGPPPLGHHLNSSLGGPGQVPSSM 310
GPPP HH+NS+ PSSM
Sbjct: 295 GGPPP--HHMNST-------PSSM 309
>gi|15232459|ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42572443|ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|8777484|dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana]
gi|17380744|gb|AAL36202.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20259621|gb|AAM14167.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|222422941|dbj|BAH19456.1| AT3G15010 [Arabidopsis thaliana]
gi|332642081|gb|AEE75602.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642082|gb|AEE75603.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/314 (62%), Positives = 231/314 (73%), Gaps = 25/314 (7%)
Query: 1 MDSIKKRKIDENGAVLSDLES----PNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDV 56
MD +KKRK+DENG L+ P RL+PQDARKI+ER T+DQLLD+L A+ RH DV
Sbjct: 1 MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
LESVR AD+D +QRKLFIRGL DTTTEGLRS+FS+YG+LEEA+VILDK TGKSKGYGF
Sbjct: 61 LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
+TF H+DGA+LALKEPSKKIDGRVTVT LA +GN G + D+S+RKI+V NVP DM
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQI-ADISMRKIYVANVPFDMP 179
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
AD+LL HF YG++EEGPLGFDK TGK +GFALFVYKTAEGAQAAL DP+K +DGK LNC
Sbjct: 180 ADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNC 239
Query: 237 RLADNKKAKPMGPDGGGPG---------NVSMNHGDGMGMVPPSAGGSYGGPGGHGYP-- 285
+LA + G GG PG HG+GMGMV P+ G YG GG
Sbjct: 240 KLAVD------GKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPA--GPYGAAGGISAYGG 291
Query: 286 FSGPPPLGHHLNSS 299
+SG PP HH+NS+
Sbjct: 292 YSGGPP-AHHMNST 304
>gi|379061692|gb|AFC89654.1| RBP42 [Elaeis guineensis]
Length = 413
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/242 (71%), Positives = 201/242 (83%), Gaps = 5/242 (2%)
Query: 5 KKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIA 64
KKRK DENGAV++ SP LTP+DARKIVE T + LLD++ A+ R VL++VR+IA
Sbjct: 6 KKRKSDENGAVVA---SPALLTPEDARKIVEPFTREHLLDIVREAMCRDAGVLDAVRAIA 62
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D DP QRKLFIRGLGW+TTTE LR++FS+YGELEEAVVI+DKATGKSKGYGFITF+HIDG
Sbjct: 63 DRDPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHIDG 122
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
A+LALKEPSKKIDGR+TVT LA AG + + +DVSLRKI+VGNVP DM +D+LLAHF
Sbjct: 123 ALLALKEPSKKIDGRMTVTQLAAAGTTAAAPPA-IDVSLRKIYVGNVPADMPSDRLLAHF 181
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA-DNKK 243
+ YGEIEEGPLGFDKQTGK +GFALFVYKTAEGA A+LVDP K +DG L C+LA D KK
Sbjct: 182 SSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLAIDGKK 241
Query: 244 AK 245
K
Sbjct: 242 VK 243
>gi|224114692|ref|XP_002316830.1| predicted protein [Populus trichocarpa]
gi|222859895|gb|EEE97442.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 203/440 (46%), Positives = 255/440 (57%), Gaps = 86/440 (19%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNR----LTPQDARKIVERLTSDQLLDVLSSAVARHDDV 56
MD IKKRK DENG + +P+ LTP++ RKI+E T DQLLD+L SA H DV
Sbjct: 1 MDFIKKRKADENGNSIPTGTTPSSPITPLTPEEIRKIIEPFTKDQLLDILQSATLHHSDV 60
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
L SVRS+AD D + RKLFIRGL +TT+E LR +FS+ GELEEA+VI DK TGKSKG+GF
Sbjct: 61 LNSVRSVADGDISLRKLFIRGLSSETTSETLRILFSSSGELEEAIVIHDKNTGKSKGFGF 120
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
ITFKH+D AML+++EPSKKIDGR+TVT LA S NS+ DVSLRK++VGNVP ++S
Sbjct: 121 ITFKHVDAAMLSIREPSKKIDGRITVTQLA----SNNSST--TDVSLRKVYVGNVPFEVS 174
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
+++LL F+ YGEIEEGPLGFDK TGK KGFA +YK EGA+AA+ DP+K +DG Q+ C
Sbjct: 175 SERLLGFFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKNEEGAKAAIADPMKNIDGHQVVC 234
Query: 237 RL-ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHH 295
+ ADN+K +N +G + ++ P + PP G
Sbjct: 235 KFAADNRK---------------VNKNSQVGAITQTSQ-----------PLTYPPLTG-- 266
Query: 296 LNSSLGGPG-----QVPSSMGGVGAGGYGAGLGGPYGGYGGPGSTGYGGLGGAGGGAGAG 350
NS GP Q+ +SM G G G Y P Y G G GG
Sbjct: 267 -NSQNYGPASTNSYQINTSMTGSGYN----------GSYRHP---PYLGAGLNDGGLNNA 312
Query: 351 GALGGAAGGLGGGSSLYRLPPSSAGMPSGGYPEAGHYGLSSTSAGYPSQHHQAAGTS--- 407
GAL +YR+P +S SG YP+ G Y L QH Q + S
Sbjct: 313 GAL------------MYRMPQASG---SGVYPDTGSYAL--------PQHQQPSSMSMPM 349
Query: 408 PVPRVP--PGGMYPNVPPYY 425
P R+P GGMY +PPYY
Sbjct: 350 PCRRLPHGAGGMYQGMPPYY 369
>gi|224076982|ref|XP_002305079.1| predicted protein [Populus trichocarpa]
gi|222848043|gb|EEE85590.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 198/433 (45%), Positives = 256/433 (59%), Gaps = 58/433 (13%)
Query: 1 MDSIKKRKIDENGAVLSDLESP----NRLTPQDARKIVERLTSDQLLDVLSSAVARHDDV 56
M+ IKKRK +ENG + SP LTP++ RKI+E T DQLLD+L SA H D+
Sbjct: 1 MEFIKKRKAEENGISIPTGTSPPSPITPLTPEEIRKILEPFTKDQLLDILQSATLHHSDI 60
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
L SVRS+AD D + RKLFIRGL +TT++ LR +FS++GELEEA+VI DK TGKSKG+GF
Sbjct: 61 LNSVRSVADGDISLRKLFIRGLSSETTSDTLRILFSSFGELEEAIVIHDKNTGKSKGFGF 120
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
ITFKH+D AML+++EPSKKIDGR+TVT LA S NS+ DVSLRK++VGNVP +++
Sbjct: 121 ITFKHVDSAMLSIREPSKKIDGRITVTQLA----SNNSSTG--DVSLRKVYVGNVPFEIT 174
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
+++LL F+ YGEIEEGPLGFDK TGK KGFA +YK+ +GA+AA+ DP+K +DG Q+ C
Sbjct: 175 SERLLGFFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKSEDGAKAAIADPMKNIDGHQVVC 234
Query: 237 RLA-DNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHH 295
+LA DNK+ G N + + PS F P P
Sbjct: 235 KLAVDNKRVNKTSQGGA-------NAQNSQPLAHPS--------------FPQPQP---- 269
Query: 296 LNSSLGGPGQVPSSMGGVGAGGYGAGLGGPYGGYGGPGSTGYGGLGGAGGGAGAGGALGG 355
+S+GG V S+ G+ L S+GY G GAG GG
Sbjct: 270 -QNSIGG---VTGSLQNYGSASNSYQLNTSL------TSSGYNGAYRVPPYVGAGPNDGG 319
Query: 356 AAGGLGGGSSLYRLPPSSAGMPSGGYPEAGHYGLSSTSAGYPSQHHQAAGTSPV-PRVP- 413
G+S+YR+P S+ G SG YP+AG Y LS Q + P+ PR P
Sbjct: 320 LN---NAGASMYRMPQSTVGTGSGVYPDAGSYALSQQQQH------QQPSSMPLPPRFPH 370
Query: 414 -PGGMYPNVPPYY 425
GGMY +PP Y
Sbjct: 371 GAGGMYQGMPPPY 383
>gi|224286903|gb|ACN41154.1| unknown [Picea sitchensis]
Length = 446
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 163/284 (57%), Positives = 205/284 (72%), Gaps = 12/284 (4%)
Query: 3 SIKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRS 62
S KKRK++ENG V +T +D RK++E T +QLLD+L A +H VLE VRS
Sbjct: 4 SAKKRKVEENGVV--------DITVEDTRKMLEPFTREQLLDILQEAATKHLGVLEQVRS 55
Query: 63 IADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHI 122
IAD DP QRKLF+RGLGWDT TE L+++FS +GELEE VVI+DK TGKSKGYGF+TFKH+
Sbjct: 56 IADKDPAQRKLFVRGLGWDTNTESLKALFSQFGELEEGVVIMDKNTGKSKGYGFVTFKHM 115
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
DGA+ ALKEPSKKIDGR+TV+ LA AG+ DVS RKI+VGNVP DM+AD+LL+
Sbjct: 116 DGALNALKEPSKKIDGRMTVSQLASAGS--QPAQPAADVSARKIYVGNVPMDMAADRLLS 173
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA-DN 241
F+ YGEIEEGPLGFDKQ+GK +GFALF++K+ + + AL +P+KT+DG Q+ C+LA +
Sbjct: 174 LFSQYGEIEEGPLGFDKQSGKSRGFALFIFKSVDATKRALEEPMKTIDGHQMFCKLAVEG 233
Query: 242 KKAKPMGPD-GGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGY 284
+K KP G GGP MN + G V PS G G GHG+
Sbjct: 234 QKPKPGGMSVPGGPDGSDMNGLNQPGNVVPSNPGMQFGGMGHGF 277
>gi|293332727|ref|NP_001168409.1| uncharacterized protein LOC100382178 [Zea mays]
gi|223948081|gb|ACN28124.1| unknown [Zea mays]
gi|413950595|gb|AFW83244.1| hypothetical protein ZEAMMB73_012333 [Zea mays]
Length = 448
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 199/267 (74%), Gaps = 18/267 (6%)
Query: 5 KKRKIDENGAVLSDLESPNR------LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
KKRK D+NGAV + SP LT +D +++E L+ DQL D+ ++A L+
Sbjct: 6 KKRKPDDNGAVTA---SPAGGAATLGLTREDVLRLLEPLSRDQLADIAAAAALVSAHALD 62
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
+VR+ AD DP RKLFIRGLGW+TT++ LR+IFSAYG+LEEAVVI DK+TG+SKGYGF+T
Sbjct: 63 AVRAAADRDPALRKLFIRGLGWETTSDSLRAIFSAYGDLEEAVVITDKSTGRSKGYGFVT 122
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSG-------NSTNNPV-DVSLRKIFVGN 170
F+H D A+LALKEPSKKIDGR+TVT LA AG++G S PV DVSLRKIFVGN
Sbjct: 123 FRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPSVGAPGSGGAPVADVSLRKIFVGN 182
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
VP DMS+++LLAHFA YGEIEEGPLGFDKQTGK +GFALFVYKT EGAQA+LVD +K +D
Sbjct: 183 VPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVID 242
Query: 231 GKQLNCRLA-DNKKAKPMGPDGGGPGN 256
QL C+LA D KK K GPGN
Sbjct: 243 SHQLVCKLAIDGKKGKQGQSQQSGPGN 269
>gi|357475705|ref|XP_003608138.1| Heterogeneous nuclear ribonucleoprotein A3-like protein [Medicago
truncatula]
gi|355509193|gb|AES90335.1| Heterogeneous nuclear ribonucleoprotein A3-like protein [Medicago
truncatula]
Length = 401
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 218/310 (70%), Gaps = 23/310 (7%)
Query: 3 SIKKRKIDENGAVLSDLES------PNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDV 56
KKRK +ENG S S P LT D RKI++ T +QLLD+L SA +H D+
Sbjct: 2 EFKKRKTEENGDANSPPSSIDAAVIPPALTSDDIRKILQPFTQEQLLDLLQSASLQHPDI 61
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
L++VRS+AD D T+RKLF+RGL +TTTE LR++FS+YG+L+EA+VI DKATG+SKGYGF
Sbjct: 62 LDAVRSVADRDTTRRKLFVRGLSGETTTETLRTVFSSYGDLDEAIVIFDKATGRSKGYGF 121
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
+ ++H+DGA+LALKEPSKKIDGR+TVT LA AG++G DVS RK+FVGNVP ++S
Sbjct: 122 VVYRHVDGAVLALKEPSKKIDGRMTVTQLAAAGSTGG------DVSSRKVFVGNVPFEVS 175
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
A+ LL+ F+ YGEIEEGPLGFDK +GK +GFA FVYKT EGA+ ++ + +KTVDG Q+ C
Sbjct: 176 AESLLSEFSKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGAKNSVAESMKTVDGHQVIC 235
Query: 237 RLA-DNKKAKPMG--PDGGGPGNVSMN-HGDGMGMVPPSAGG---SY-GGPGGHGYPFS- 287
+ A DNKK KP+G P G N ++N H M+PP G SY P G+ P +
Sbjct: 236 KFAVDNKKPKPVGQNPSGFPVDNSNVNYHPPNPTMMPPQYGAPPNSYVQQPYGNQVPAAG 295
Query: 288 --GPPPLGHH 295
GP P+ H+
Sbjct: 296 GYGPGPVPHY 305
>gi|255563118|ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538254|gb|EEF39863.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 398
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/260 (58%), Positives = 191/260 (73%), Gaps = 9/260 (3%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNRLTP----QDARKIVERLTSDQLLDVLSSAVARHDDV 56
MD KKRK DENG S T QD RKI+E T +QLL++L +A RH DV
Sbjct: 1 MDFTKKRKADENGTTTITTTSSPPPTTTLSPQDIRKIIEPFTKEQLLEILQNAATRHADV 60
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
LESVR++AD+D + RKLFIRGL +TTTE +R++F+ YGELEEA+VI DK TGKSKG+GF
Sbjct: 61 LESVRTLADSDISLRKLFIRGLSSETTTETIRNLFNNYGELEEAIVIFDKNTGKSKGFGF 120
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVA---GNSGNSTNNPVDVSLRKIFVGNVPN 173
ITFKH+DGA++ALKEPSKKIDGR+TVT LA A +S NS+ DVS RKI+VGNVP
Sbjct: 121 ITFKHVDGALIALKEPSKKIDGRMTVTQLASAGLSNSSINSSGGGSDVSARKIYVGNVPY 180
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ +++LL F YGE+EEGPLGFDK TGK KGFA +YKT EGA+AA+ DP+K +DG Q
Sbjct: 181 NIPSERLLGFFLNYGEVEEGPLGFDKSTGKSKGFAFIIYKTEEGAKAAIADPVKMIDGHQ 240
Query: 234 LNCRL--ADNKKAKPMGPDG 251
+ C++ A+NKK K G G
Sbjct: 241 VVCKMAVANNKKVKTHGSSG 260
>gi|356502762|ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816590 [Glycine max]
Length = 384
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 150/267 (56%), Positives = 194/267 (72%), Gaps = 22/267 (8%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNRLTP----------------QDARKIVERLTSDQLLD 44
M+ KKRK ENG +D P +D RKI++ + +QLLD
Sbjct: 1 MEFPKKRKTQENGDTTTDSPPPQSTEEAPLAAATPAPASPLASEDIRKILQPFSQEQLLD 60
Query: 45 VLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVIL 104
+L SA RH DVL++VR++AD D T RKLF+RGL +TTTE LRS+FS +GEL+EA+VI+
Sbjct: 61 LLQSASLRHPDVLDAVRAVADCDSTLRKLFVRGLAGETTTETLRSVFSGFGELDEAIVIM 120
Query: 105 DKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR 164
DKATG+SKGYGF+ F+H+DGA+LALK+PSKKIDGR+TVT LA AG G DVSLR
Sbjct: 121 DKATGRSKGYGFVVFRHVDGAILALKDPSKKIDGRMTVTQLAAAGGPGGG-----DVSLR 175
Query: 165 KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD 224
K+FVGNVP ++S+++LL F +GE+EEGPLGFDK +GK +GFA FVYKT EGA+A+LV+
Sbjct: 176 KVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARASLVE 235
Query: 225 PIKTVDGKQLNCRLA-DNKKAKPMGPD 250
P+KT++G Q+ C+LA DNKK KP G D
Sbjct: 236 PLKTIEGHQVICKLAVDNKKTKPFGTD 262
>gi|414881835|tpg|DAA58966.1| TPA: heterogeneous nuclear ribonucleoprotein A3-like protein 2
isoform 1 [Zea mays]
gi|414881836|tpg|DAA58967.1| TPA: heterogeneous nuclear ribonucleoprotein A3-like protein 2
isoform 2 [Zea mays]
Length = 447
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 196/267 (73%), Gaps = 18/267 (6%)
Query: 5 KKRKIDENGAVLSDLESPNR------LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
KKRK DENGAV + SP LT D +++E L+ DQL D+ ++A L+
Sbjct: 6 KKRKPDENGAVTA---SPAGGAATLGLTRDDVIRLLEPLSRDQLADIAAAAALVSSQALD 62
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
+VR+ AD DP RKLF+RGLGW+TT++ LR+IFSAYG+LEEAVVI DK TG+SKGYGF+T
Sbjct: 63 AVRAAADRDPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKPTGRSKGYGFVT 122
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPV--------DVSLRKIFVGN 170
F+H D A+LALKEPSKKIDGR+TVT LA AG++G P DVSLRKIFVGN
Sbjct: 123 FRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPAGGPAGSGGAPVSDVSLRKIFVGN 182
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
VP DM++++LLAHFA YGEIEEGPLGFDKQTGK +GFALFVYKT EGAQA+LVD +K +D
Sbjct: 183 VPADMASERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKVID 242
Query: 231 GKQLNCRLA-DNKKAKPMGPDGGGPGN 256
G QL C+LA D KK K GPGN
Sbjct: 243 GHQLVCKLALDGKKEKQGQSQQPGPGN 269
>gi|226504174|ref|NP_001150933.1| heterogeneous nuclear ribonucleoprotein A3-like protein 2 [Zea
mays]
gi|195643046|gb|ACG40991.1| heterogeneous nuclear ribonucleoprotein A3-like protein 2 [Zea
mays]
Length = 447
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 196/267 (73%), Gaps = 18/267 (6%)
Query: 5 KKRKIDENGAVLSDLESPNR------LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
KKRK DENGAV + SP LT D +++E L+ DQL D+ ++A L+
Sbjct: 6 KKRKPDENGAVTA---SPAGGAATLGLTRDDVIRLLEPLSRDQLADIAAAAALVSSQALD 62
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
+VR+ AD DP RKLF+RGLGW+TT++ LR+IFSAYG+LEEAVVI DK TG+SKGYGF+T
Sbjct: 63 AVRAAADRDPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKPTGRSKGYGFVT 122
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPV--------DVSLRKIFVGN 170
F+H D A+LALKEPSKKIDGR+TVT LA AG++G P DVSLRKIFVGN
Sbjct: 123 FRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPAGGPAGSGGAPVSDVSLRKIFVGN 182
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
VP DM++++LLAHFA YGEIEEGPLGFDKQTGK +GFALFVYKT EGAQA+LVD +K +D
Sbjct: 183 VPADMASERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKVID 242
Query: 231 GKQLNCRLA-DNKKAKPMGPDGGGPGN 256
G QL C+LA D KK K GPGN
Sbjct: 243 GHQLVCKLALDGKKEKQGQSQQPGPGN 269
>gi|242058013|ref|XP_002458152.1| hypothetical protein SORBIDRAFT_03g027820 [Sorghum bicolor]
gi|241930127|gb|EES03272.1| hypothetical protein SORBIDRAFT_03g027820 [Sorghum bicolor]
Length = 445
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 206/302 (68%), Gaps = 32/302 (10%)
Query: 5 KKRKIDENGAVLSDLESPNR------LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
KKRK DENGAV + SP LT D +++E L+ DQL D+ ++A L+
Sbjct: 6 KKRKPDENGAVTA---SPAGGAATLGLTRDDVLRLLEPLSRDQLADIAAAAALVSAHALD 62
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
+VR+ AD DP RKLF+RGLGW+TT++ LR+IFSAYG+LEEAVVI DK TG+SKGYGF+T
Sbjct: 63 AVRAAADRDPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKTTGRSKGYGFVT 122
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP--------VDVSLRKIFVGN 170
F+H D A+LALKEPSKKIDGR+TVT LA AG++G + DV+LRKIFVGN
Sbjct: 123 FRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPSGGAAGSGGAPVADVALRKIFVGN 182
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
VP DM +++LLAHFA YGEIEEGPLGFDKQTGK +GFALFVYKT EGAQA+LVD +K +D
Sbjct: 183 VPADMPSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKVID 242
Query: 231 GKQLNCRLA-DNKKAKPMGPDGGGP-----------GNVSMNHGDGMGMVPPSAGGSYGG 278
G QL C+LA + KKAK GP G M G G+G G YGG
Sbjct: 243 GHQLVCKLAIEGKKAKQGQSQQSGPGNQQQQQMLQGGPQDMQGGLGLG---SQMGAQYGG 299
Query: 279 PG 280
PG
Sbjct: 300 PG 301
>gi|356521446|ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Glycine max]
Length = 384
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/263 (58%), Positives = 195/263 (74%), Gaps = 18/263 (6%)
Query: 1 MDSIKKRKIDENGAVL------SDLES------PNRLTPQDARKIVERLTSDQLLDVLSS 48
M+ KKRK +ENG S ES P L +D RKI++ + +QLLD+L S
Sbjct: 1 MEFTKKRKTEENGDTTDYPPQQSTEESPIAAAAPAPLAAEDIRKILQPFSQEQLLDLLQS 60
Query: 49 AVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
A RH DVL++VR++AD D T RKLF+RGL +TTTE LR +FSA+GEL+EA+VI+DKAT
Sbjct: 61 ASLRHPDVLDAVRAVADLDSTLRKLFVRGLAGETTTETLRGVFSAFGELDEAIVIIDKAT 120
Query: 109 GKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFV 168
G+SKGYGF+ F H+DGA+LALKEPSKKIDGR+TVT LA AG G DVSLRK+FV
Sbjct: 121 GRSKGYGFVVFSHVDGAILALKEPSKKIDGRMTVTQLAAAGGPGGG-----DVSLRKVFV 175
Query: 169 GNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKT 228
GNVP ++S+++LL F +GE+EEGPLGFDK +GK +GFA FVYKT EGA+A+LV+P+KT
Sbjct: 176 GNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARASLVEPLKT 235
Query: 229 VDGKQLNCRLA-DNKKAKPMGPD 250
++G Q+ C+LA DNKK KP D
Sbjct: 236 IEGHQVICKLAVDNKKTKPFVAD 258
>gi|168024548|ref|XP_001764798.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684092|gb|EDQ70497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 173/220 (78%), Gaps = 3/220 (1%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
+T +D +K+VE T +QL+D+L +A H DVL +R +AD DP RK+F+RGLGWDTTT
Sbjct: 19 ITKEDVKKLVEPFTKEQLMDLLENAALNHADVLHEIRKLADKDPGHRKIFVRGLGWDTTT 78
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTN 144
E L+++FS +GE+EE VI+DKATGKS+G+GF+TFKH+DGA +LKEPSK+IDGR+TV
Sbjct: 79 ETLKTVFSQFGEVEEGAVIMDKATGKSRGFGFVTFKHMDGAQRSLKEPSKRIDGRMTVCQ 138
Query: 145 LAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKP 204
LA G + N +VS RKI+VGNVP D+SAD+LLA FA YGEIEEGPLGFDK TG+
Sbjct: 139 LASTGALQVNPNQ--EVSQRKIYVGNVPLDLSADRLLALFAGYGEIEEGPLGFDKFTGRS 196
Query: 205 KGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL-ADNKK 243
+GFAL +YKT E A+ AL++PIKT+DG Q+ C+L A+N+K
Sbjct: 197 RGFALIIYKTVEAAKRALLEPIKTLDGIQMYCKLAAENQK 236
>gi|357135512|ref|XP_003569353.1| PREDICTED: uncharacterized protein LOC100825606 [Brachypodium
distachyon]
Length = 448
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/261 (59%), Positives = 188/261 (72%), Gaps = 11/261 (4%)
Query: 5 KKRKIDENGAVLSDLESPNR---LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVR 61
KKRK DENGAV + + LT D +++E L+ DQL D+ ++A L++VR
Sbjct: 6 KKRKPDENGAVAASPAAGAAALGLTRDDVLRLLEPLSRDQLADIAAAAALASGVALDAVR 65
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
+ AD DP RKLF+RGLGW+T ++ LR+IFSAYG+LEEAVVI DK+TG+SKGYGF+TF+H
Sbjct: 66 AAADRDPALRKLFVRGLGWETNSDSLRTIFSAYGDLEEAVVISDKSTGRSKGYGFVTFRH 125
Query: 122 IDGAMLALKEPSKKIDGRVTVTNL--------AVAGNSGNSTNNPVDVSLRKIFVGNVPN 173
D A+LALKEPSKKIDGR+TVT L G +G DVSLRKIFVGNVP
Sbjct: 126 ADSAVLALKEPSKKIDGRMTVTQLAAAGAAGGPSGGTAGAGGAPAADVSLRKIFVGNVPA 185
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
DMS+++LLAHFA YGEIEEGPLGFDKQTGK +GFALFVYKT +GAQA+LVD IKT++G Q
Sbjct: 186 DMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPDGAQASLVDSIKTIEGHQ 245
Query: 234 LNCRLADNKKAKPMGPDGGGP 254
L C+LA K P GP
Sbjct: 246 LVCKLAIEGKKGKQQPQQSGP 266
>gi|326488012|dbj|BAJ89845.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/264 (57%), Positives = 184/264 (69%), Gaps = 17/264 (6%)
Query: 5 KKRKIDENGAVLSDLESPNR------LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
KKRK DENGAV + SP LT D ++++ L+ DQL D+ ++A L+
Sbjct: 6 KKRKPDENGAVAA---SPAVGAATLGLTRDDVLRLLDPLSRDQLADIAAAAALASGVALD 62
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
+VR+ AD DP RKLF+RGLGW+T ++ LR+IFSAYG+LEEAVVI DK TG+SKGYGF+T
Sbjct: 63 AVRAAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSKGYGFVT 122
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNL--------AVAGNSGNSTNNPVDVSLRKIFVGN 170
F+H D A+LALKEPSKKID RVTVT L G +G DVSLRKIFVGN
Sbjct: 123 FRHADSALLALKEPSKKIDARVTVTQLAAAGAAGGPSGGTTGAGGIPSADVSLRKIFVGN 182
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
VP DM +++LLAHFA YGEIEEGPLGFDK TGK +GFALFVYKT EGAQA+LVD K +D
Sbjct: 183 VPADMPSERLLAHFASYGEIEEGPLGFDKLTGKFRGFALFVYKTPEGAQASLVDSTKVID 242
Query: 231 GKQLNCRLADNKKAKPMGPDGGGP 254
G+QL C+LA K P GP
Sbjct: 243 GQQLLCKLAIEGKKGKQQPQQSGP 266
>gi|115438550|ref|NP_001043567.1| Os01g0614500 [Oryza sativa Japonica Group]
gi|54290288|dbj|BAD61233.1| heterogeneous nuclear ribonucleoprotein A2/B1-like [Oryza sativa
Japonica Group]
gi|113533098|dbj|BAF05481.1| Os01g0614500 [Oryza sativa Japonica Group]
Length = 447
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/247 (60%), Positives = 183/247 (74%), Gaps = 12/247 (4%)
Query: 5 KKRKIDENGAVLSDLESPNR----LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESV 60
KKRK DENGA ++ + LT D ++VE L+ DQL D+ ++A L++V
Sbjct: 6 KKRKPDENGAAVASSPAAGAAALGLTRDDLLRLVEPLSRDQLADIAATAALASGVALDAV 65
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
R+ AD DP RKLF+RGLGW+T ++ LR+IFSA+G+LEEAVVI DK+TG+SKGYGF+TF+
Sbjct: 66 RAAADRDPALRKLFVRGLGWETNSDSLRAIFSAFGDLEEAVVITDKSTGRSKGYGFVTFR 125
Query: 121 HIDGAMLALKEPSKKIDGRVTVTNL--------AVAGNSGNSTNNPVDVSLRKIFVGNVP 172
H D A+LALKEPSKKIDGR+TVT L A G +G DVSLRKIFVGNVP
Sbjct: 126 HADSAVLALKEPSKKIDGRMTVTQLAAAGAAGGASGGAAGAGGAPAADVSLRKIFVGNVP 185
Query: 173 NDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
DM +++LLAHFA YGEIEEGPLGFDKQTGK +GFALFVYKT EGAQA+LVD +K +DG
Sbjct: 186 ADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGH 245
Query: 233 QLNCRLA 239
QL C+LA
Sbjct: 246 QLVCKLA 252
>gi|116787988|gb|ABK24718.1| unknown [Picea sitchensis]
gi|148910800|gb|ABR18466.1| unknown [Picea sitchensis]
Length = 442
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 212/379 (55%), Gaps = 46/379 (12%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+K++E +QL+D++S + +LES+R +AD DP RK+F+RGLGW+TT+E L+S+
Sbjct: 51 KKLLEPFNKEQLMDIISEHAKKDPQLLESIRKLADKDPAHRKIFVRGLGWETTSEALKSV 110
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
FS YGELEE VI DK TGKSKGYGF+TFKH+ GA ALK+PSKKID R+T +A AG
Sbjct: 111 FSQYGELEECTVITDKGTGKSKGYGFVTFKHMVGAQKALKDPSKKIDSRMTACQMASAGP 170
Query: 151 SGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALF 210
+ + PV+ + RKI+V NV D+ A+KLL F+ YGE+EEGPLGFDK TG+ +GFALF
Sbjct: 171 A--PAHPPVEATGRKIYVSNVSADIPAEKLLNFFSKYGEVEEGPLGFDKHTGRSRGFALF 228
Query: 211 VYKTAEGAQAALVDPIKTVDGKQLNCRLAD--NKKAKPMGPDGGG--PGNVSMNHGDGMG 266
VYK AEGA+ AL +P K V+G +NC+ A NK P G P ++++ H G G
Sbjct: 229 VYKNAEGAKKALEEPNKIVEGHSMNCKRAAEGNKHRNAHTPSTGSLDPNDLALTH--GAG 286
Query: 267 MVPPSAGGSYGGPGGHGYPFS--GPPPLGHHLNSSLGGPGQ------------------- 305
+ SA ++G G PF+ G P N+ L G Q
Sbjct: 287 SILGSAAAAHGVLGS-SLPFNQGGAPGFSQAFNAILAGQNQNFPGLNHSFFSSVNPALAS 345
Query: 306 ----------------VPSSMGGVGAGGYGAGLGGPYGGYGGPGSTGYGGLGGAGGGAGA 349
V +S+G VG+ G LGG +GG GS G LG G A A
Sbjct: 346 SFNPSSLSQAAAFSPSVQNSLGSVGSYGMHPSLGGYGSQHGGVGSVNPGVLGVYGSQAAA 405
Query: 350 GGALGGAAGGLGGGSSLYR 368
L G S L R
Sbjct: 406 LQGLNAYQNSQLGQSPLPR 424
>gi|302804178|ref|XP_002983841.1| hypothetical protein SELMODRAFT_45421 [Selaginella moellendorffii]
gi|300148193|gb|EFJ14853.1| hypothetical protein SELMODRAFT_45421 [Selaginella moellendorffii]
Length = 251
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 125/249 (50%), Positives = 166/249 (66%), Gaps = 15/249 (6%)
Query: 5 KKRKIDEN-GAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI 63
KKRK +E+ G +E P+ L D K++E L + +L + +H VLE VR
Sbjct: 1 KKRKAEEDPGGDAGGVEQPD-LDSADVLKLLEPLDRGAMHYILQISCLQHPAVLEEVRRY 59
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
D DP RKLF+RGLGWDTTTE L+ +FS GE++EAV+I DKAT KS+G+GF++FKH+D
Sbjct: 60 VDRDPAHRKLFVRGLGWDTTTETLKGVFSQSGEVDEAVIIRDKATQKSRGFGFVSFKHMD 119
Query: 124 GAMLALKEPSKKIDGRVTVTNLAV-------------AGNSGNSTNNPVDVSLRKIFVGN 170
GA+ ALKEPSK+IDGR+T A + N DVS RKI+VG+
Sbjct: 120 GALRALKEPSKRIDGRMTACQFASTSSSSTPCSSITPSMNPPPPRPFIEDVSTRKIYVGS 179
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
VP SADK+LA F+ +GEI EGPLGFD+ TG KGFAL +++T+EGA+ AL+DP KT+D
Sbjct: 180 VPVGTSADKVLAIFSQFGEIAEGPLGFDRSTGASKGFALIIFRTSEGARKALLDPFKTID 239
Query: 231 GKQLNCRLA 239
G Q++C+LA
Sbjct: 240 GHQVHCKLA 248
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D + RK+++ + T+ + + +IFS +GE+ E + D++TG SKG+ I F+ +GA
Sbjct: 169 DVSTRKIYVGSVPVGTSADKVLAIFSQFGEIAEGPLGFDRSTGASKGFALIIFRTSEGAR 228
Query: 127 LALKEPSKKIDGRVTVTNLAVAG 149
AL +P K IDG LA G
Sbjct: 229 KALLDPFKTIDGHQVHCKLAAEG 251
>gi|302754808|ref|XP_002960828.1| hypothetical protein SELMODRAFT_70937 [Selaginella moellendorffii]
gi|300171767|gb|EFJ38367.1| hypothetical protein SELMODRAFT_70937 [Selaginella moellendorffii]
Length = 251
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/249 (50%), Positives = 164/249 (65%), Gaps = 15/249 (6%)
Query: 5 KKRKIDEN-GAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI 63
KKRK +E+ G +E P+ L D K++E L + +L + +H VLE VR
Sbjct: 1 KKRKAEEDPGGDAGGVEQPD-LDSADVLKLLEPLDRGAMHYILQISCLQHPAVLEEVRRY 59
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
D DP RKLF+RGLGWDTT E L+ +FS GE++EAV+I DKAT KS+G+GF++FKH+D
Sbjct: 60 VDRDPAHRKLFVRGLGWDTTAETLKGVFSQSGEVDEAVIIRDKATQKSRGFGFVSFKHMD 119
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAG-------------NSGNSTNNPVDVSLRKIFVGN 170
GA+ ALKEPSK+IDGR+T A N DVS RKI+VG+
Sbjct: 120 GALRALKEPSKRIDGRMTACQFASTSSSSTPCSSITPSINPPPPRPFIEDVSTRKIYVGS 179
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
VP SADK+LA F+ +GEI EGPLGFD+ TG KGFAL +Y+T+EGA+ AL+DP KT+D
Sbjct: 180 VPVGTSADKVLAIFSQFGEIAEGPLGFDRSTGASKGFALIIYRTSEGARKALLDPFKTID 239
Query: 231 GKQLNCRLA 239
G Q++C+LA
Sbjct: 240 GHQVHCKLA 248
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D + RK+++ + T+ + + +IFS +GE+ E + D++TG SKG+ I ++ +GA
Sbjct: 169 DVSTRKIYVGSVPVGTSADKVLAIFSQFGEIAEGPLGFDRSTGASKGFALIIYRTSEGAR 228
Query: 127 LALKEPSKKIDGRVTVTNLAVAG 149
AL +P K IDG LA G
Sbjct: 229 KALLDPFKTIDGHQVHCKLAAEG 251
>gi|148910248|gb|ABR18205.1| unknown [Picea sitchensis]
Length = 382
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 161/241 (66%), Gaps = 8/241 (3%)
Query: 5 KKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIA 64
K +D N + D T +DA ++E + D+L ++L A+ +H D++ V ++A
Sbjct: 93 KNETVDPNDGFVDDY----VFTKEDAETLMETFSKDELAEILKLALKKHGDIVSEVANVA 148
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D +RKLF+RGLGW T E L S+FSAYGE+E+A +++D+ +GKSKG+GF+TFK G
Sbjct: 149 SKDSAKRKLFVRGLGWHTKPETLNSVFSAYGEVEKADIVMDRNSGKSKGFGFVTFKSFAG 208
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
+ ALKEPSKKID R+TV NL+ +G S + V RKI+VG +PND+ + KL+ F
Sbjct: 209 VVAALKEPSKKIDDRMTVCNLS----TGVSAPDSQQVHGRKIYVGGLPNDVDSAKLVKLF 264
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+ YGEIEEGPLGFDK+TGK KGFA F+YK+ + A AL +P+KT DG L C+LA K
Sbjct: 265 SQYGEIEEGPLGFDKKTGKSKGFAFFIYKSEKSANNALDEPMKTFDGATLTCKLAPPKNT 324
Query: 245 K 245
K
Sbjct: 325 K 325
>gi|302788860|ref|XP_002976199.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
gi|300156475|gb|EFJ23104.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
Length = 343
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 161/245 (65%), Gaps = 16/245 (6%)
Query: 5 KKRKIDENGAVLSDLES----------PNRLTPQDARKIVERLTSDQLLDVLSSAVARHD 54
KKRKI E SDL P RL+ D ++++E L+ +QL+ +L+ A +++
Sbjct: 8 KKRKIKEE----SDLHDAPMEGYEAPVPLRLSRDDLKRLLEPLSKEQLVALLTDAGSQYS 63
Query: 55 DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
V + +R +A DP RKLF+RGL W+TT++ LR F +GE+EE VI+DKATGKS+G+
Sbjct: 64 AVADDIREVASKDPAHRKLFVRGLAWETTSQDLRDAFEQFGEIEEGAVIIDKATGKSRGF 123
Query: 115 GFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPND 174
GFITFKH+D A ALKEPSK IDGR+TV NLA G SG+ N D + RK+++G + +
Sbjct: 124 GFITFKHMDSAQRALKEPSKTIDGRITVCNLASVGTSGSGGTN--DQAQRKLYIGGLSYE 181
Query: 175 MSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL 234
S + LL F+ YGEIEEG + +DK T K +GFA YKT E A+ A+ DP KT++G+ +
Sbjct: 182 TSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAIDDPNKTIEGRHV 241
Query: 235 NCRLA 239
+LA
Sbjct: 242 IVKLA 246
>gi|116779627|gb|ABK21372.1| unknown [Picea sitchensis]
Length = 265
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 150/212 (70%), Gaps = 4/212 (1%)
Query: 34 VERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSA 93
+E + D+L ++L A+ +H D++ V ++A D +RKLF+RGLGW T E L S+FSA
Sbjct: 1 METFSKDELAEILKLALKKHGDIVSEVANVASKDSAKRKLFVRGLGWHTKPETLNSVFSA 60
Query: 94 YGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGN 153
YGE+E+A +++D+ +GKSKG+GF+TFK G + ALKEPSKKID R+TV NL+ +G
Sbjct: 61 YGEVEKADIVMDRNSGKSKGFGFVTFKSFAGVVAALKEPSKKIDDRMTVCNLS----TGV 116
Query: 154 STNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYK 213
S + V RKI+VG +PND+ + KL+ F+ YGEIEEGPLGFDK+TGK KGFA F+YK
Sbjct: 117 SAPDSQQVHGRKIYVGGLPNDVDSAKLVKLFSQYGEIEEGPLGFDKKTGKSKGFAFFIYK 176
Query: 214 TAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+ + A AL +P+KT DG L C+LA K K
Sbjct: 177 SEKSANNALDEPMKTFDGATLTCKLAPPKNTK 208
>gi|225439119|ref|XP_002270568.1| PREDICTED: uncharacterized protein LOC100243393 [Vitis vinifera]
Length = 463
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/279 (44%), Positives = 159/279 (56%), Gaps = 26/279 (9%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+KI+E + DQL+++L A +H DV E +R +AD DP RK+F+ GLGWDT E L S+
Sbjct: 78 QKILEPFSKDQLINLLREAAEKHADVAERLRRVADEDPVHRKIFVHGLGWDTNAETLISV 137
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA---- 146
F YGE+E+ + DK +GKSKGYGFI FK GA ALK+P KKI R+T LA
Sbjct: 138 FKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQPQKKIGNRMTACQLASIGP 197
Query: 147 -------VAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDK 199
A S ++ + + + RKI+V NV ++ KLL F+ YGEIEEGPLG DK
Sbjct: 198 VPSPAVGQAAMSVSAAQSVSEYTQRKIYVSNVGAELDPQKLLVFFSKYGEIEEGPLGLDK 257
Query: 200 QTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSM 259
QTGKPKGF LFVYKTAEGA+ AL +P K DG L+C+ A DG PG
Sbjct: 258 QTGKPKGFCLFVYKTAEGAKKALDEPHKNFDGHILHCQKA---------IDGPKPGKQQQ 308
Query: 260 NHGDGMGMVPP------SAGGSYGGPGGHGYPFSGPPPL 292
P S ++ GP GH SGPP +
Sbjct: 309 LQQQQHHHNLPNTHYTKSEITNFMGPQGHLMAPSGPPAI 347
>gi|147807511|emb|CAN72884.1| hypothetical protein VITISV_028589 [Vitis vinifera]
Length = 463
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/279 (44%), Positives = 159/279 (56%), Gaps = 26/279 (9%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+KI+E + DQL+++L A +H DV E +R +AD DP RK+F+ GLGWDT E L S+
Sbjct: 78 QKILEPFSKDQLINLLREAAEKHADVAERLRRVADEDPVHRKIFVHGLGWDTNAETLISV 137
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA---- 146
F YGE+E+ + DK +GKSKGYGFI FK GA ALK+P KKI R+T LA
Sbjct: 138 FKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQPQKKIGNRMTACQLASIGP 197
Query: 147 -------VAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDK 199
A S ++ + + + RKI+V NV ++ KLL F+ YGEIEEGPLG DK
Sbjct: 198 VPSPAVGQAAMSVSAAQSVSEYTQRKIYVSNVGAELDPQKLLVFFSKYGEIEEGPLGLDK 257
Query: 200 QTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSM 259
QTGKPKGF LFVYKTAEGA+ AL +P K DG L+C+ A DG PG
Sbjct: 258 QTGKPKGFCLFVYKTAEGAKKALDEPHKNFDGHILHCQKA---------IDGPKPGKQQQ 308
Query: 260 NHGDGMGMVPP------SAGGSYGGPGGHGYPFSGPPPL 292
P S ++ GP GH SGPP +
Sbjct: 309 LQQQQHHHNLPNTHYTKSEITNFMGPQGHLMAPSGPPAI 347
>gi|116787064|gb|ABK24360.1| unknown [Picea sitchensis]
Length = 365
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/254 (45%), Positives = 162/254 (63%), Gaps = 15/254 (5%)
Query: 5 KKRKIDE--NGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRS 62
KKRK+DE NGA L +L+ ++E L+ +QL+ +L A + + + E ++
Sbjct: 8 KKRKLDEEANGAAL-------QLSKDHLHSLLEPLSKEQLISLLVDAGSSYPAIAEEIKD 60
Query: 63 IADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHI 122
+A DP RKLF+RGL W+T+++ L F YGE+EE VI+DKA+GKS+G+GF+TFKH+
Sbjct: 61 VASKDPAHRKLFVRGLAWETSSQTLCDAFEQYGEIEEGAVIMDKASGKSRGFGFVTFKHM 120
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGN-SGNSTNNPVDVSLRKIFVGNVPNDMSADKLL 181
D A ALKEPSK IDGR+TV+NLAVA G S D + RK+++G + D + DKLL
Sbjct: 121 DSAQKALKEPSKTIDGRITVSNLAVASTGPGQS----ADQAQRKLYIGGLSYDTANDKLL 176
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL-AD 240
F+ YGEIEEG + +DK T K +GFA +KT E + AL +P KT+DG+ + +L AD
Sbjct: 177 EVFSKYGEIEEGSVAYDKNTNKSRGFAFVTFKTVEATKRALKEPNKTIDGRTVTVKLAAD 236
Query: 241 NKKAKPMGPDGGGP 254
+K KP P
Sbjct: 237 GQKEKPQSQPAVSP 250
>gi|82621124|gb|ABB86250.1| RNA-binding protein AKIP1-like [Solanum tuberosum]
Length = 498
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 141/212 (66%), Gaps = 5/212 (2%)
Query: 33 IVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFS 92
++E T DQL ++ A+A++ D E+++ +AD DP RK+F+ GLGWDTT E L S+F+
Sbjct: 121 LLEPFTKDQLTALIKEALAKYPDFKENIQKLADKDPAHRKIFVHGLGWDTTAETLTSVFA 180
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSG 152
YGE+E+ + DK +GKSKGYGFI FKH GA ALKEP KKI R+T LA AG
Sbjct: 181 TYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLASAGPVP 240
Query: 153 NSTNNPV-----DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGF 207
+ + RKIFV NV D+ KLL +F+ +GE+EEGPLG DKQ+GKPKGF
Sbjct: 241 APPPTTATPPVSEYTQRKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGF 300
Query: 208 ALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
LFVYKT EGA+ AL +P KT +G L+C+ A
Sbjct: 301 CLFVYKTVEGARKALEEPHKTFEGHTLHCQKA 332
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
TQRK+F+ + D + L FS +GE+EE + LDK +GK KG+ +K ++GA A
Sbjct: 255 TQRKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGFCLFVYKTVEGARKA 314
Query: 129 LKEPSKKIDGRVTVTNLAVAG 149
L+EP K +G A+ G
Sbjct: 315 LEEPHKTFEGHTLHCQKAIDG 335
>gi|359479205|ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
vinifera]
gi|359479207|ref|XP_003632234.1| PREDICTED: uncharacterized protein LOC100258161 isoform 2 [Vitis
vinifera]
gi|147853236|emb|CAN80681.1| hypothetical protein VITISV_037734 [Vitis vinifera]
Length = 478
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 140/212 (66%), Gaps = 3/212 (1%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
K++E + +QLL +L AV ++ D ++SVR +ADADP RK+F+ GLGWDTT E L S+
Sbjct: 117 EKLLEPFSKEQLLALLREAVEKYPDFVDSVRRLADADPAHRKIFVHGLGWDTTAETLTSV 176
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
F YGE+E+ + DK +GKSKGY FI FKH GA ALK+P KKI R+T LA AG
Sbjct: 177 FGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAGP 236
Query: 151 SGNSTNNPV---DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGF 207
+ + RKIFV NV +++ KLL FA +GEIEEGPLG DK TGKPKGF
Sbjct: 237 VPAPPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGF 296
Query: 208 ALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
ALFVYK+ E ++ AL +P K +G L+C+ A
Sbjct: 297 ALFVYKSIESSRRALEEPHKIFEGHTLHCQKA 328
>gi|302754726|ref|XP_002960787.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
gi|300171726|gb|EFJ38326.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
Length = 359
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 159/241 (65%), Gaps = 12/241 (4%)
Query: 2 DSIKKRKI---DENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
+ KKRK+ D NG +S L+ D ++++E L+ +QL+ +L A +++ V +
Sbjct: 6 EDTKKRKLNSDDSNGYSVS-------LSKDDLKRLLEPLSKEQLVALLIDAGSQYPAVAD 58
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
+R +A DP RKLF+RGL W+TT++ LR F YGE+EE VI DKATGKS+G+GFIT
Sbjct: 59 DIRDVASKDPAHRKLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFIT 118
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
FKH+D A ALKEPSK IDGR+TV NLA G+S + + D + RK+++G + + S +
Sbjct: 119 FKHMDSAQRALKEPSKTIDGRITVCNLASVGSSAGAGS--ADQAQRKLYIGGLSYETSNE 176
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
LL F+ YGEIEEG + +DK T K +GFA YK+ E A+ A+ DP KT++G+ + +L
Sbjct: 177 TLLNIFSQYGEIEEGAVAYDKNTNKSRGFAFITYKSVEAARKAIDDPNKTIEGRHVIVKL 236
Query: 239 A 239
A
Sbjct: 237 A 237
>gi|449437591|ref|XP_004136575.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Cucumis sativus]
gi|449501907|ref|XP_004161491.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Cucumis sativus]
Length = 335
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 177/289 (61%), Gaps = 17/289 (5%)
Query: 1 MDSIKKRKIDEN--GAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
M+ +KKRK++E A S LE R ++E L QL+D+L+ +++ + E
Sbjct: 1 MEDLKKRKLEETVGNAEFSSLE--------HLRTLLEPLPKPQLVDLLARLGSQYPSIAE 52
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
++S+A ADP RKLF+RGL W+TT+E L + FS +GE+EE VI DKATGKS+GYGFIT
Sbjct: 53 EIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFIT 112
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+KH++ ALK PSK I+GR+ V NLA G SG+ST D++ RK+++G + D++++
Sbjct: 113 YKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGSSTTP--DLAQRKLYIGGLSPDITSE 170
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
LL F YG+IEEG + +DK T + +GF Y TAE A+ A+ DP KT G+ + +L
Sbjct: 171 VLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKL 230
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGG--PGGHGYP 285
AD+ + K M P SM + G P G +GG P G+ YP
Sbjct: 231 ADSHRNKMMQAQ-VSPAIPSMPYPVAAGY--PQPGKPHGGVAPVGYAYP 276
>gi|224137512|ref|XP_002322576.1| predicted protein [Populus trichocarpa]
gi|222867206|gb|EEF04337.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 138/223 (61%), Gaps = 14/223 (6%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
K++E DQL+++L A H DV E +R +AD DP RK+F+ GLGWDT E L S
Sbjct: 93 EKLLEPFGKDQLINLLREAADAHRDVAEKIRQVADQDPVHRKIFVHGLGWDTNAEALMSA 152
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
F YGE+E+ + DK +GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 153 FKPYGEIEDCKAVCDKVSGKSKGYGFILFKRRSGARKALKEPQKKIGNRMTACQLASIGP 212
Query: 151 SGNSTNNPV--------------DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLG 196
S+ + +LRKI+V NV D+ KL ++F+ +GEIEEGPLG
Sbjct: 213 VPQSSGGQAGPVAAAAQAQQPVSEYTLRKIYVSNVAADLDPQKLYSYFSEFGEIEEGPLG 272
Query: 197 FDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
DK TGKPKGF LFVYK++EGA+ AL +P K+ +G L+C+ A
Sbjct: 273 LDKATGKPKGFCLFVYKSSEGAKKALEEPHKSFEGHMLHCQKA 315
>gi|296083996|emb|CBI24384.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 140/211 (66%), Gaps = 3/211 (1%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
K++E + +QLL +L AV ++ D ++SVR +ADADP RK+F+ GLGWDTT E L S+F
Sbjct: 133 KLLEPFSKEQLLALLREAVEKYPDFVDSVRRLADADPAHRKIFVHGLGWDTTAETLTSVF 192
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS 151
YGE+E+ + DK +GKSKGY FI FKH GA ALK+P KKI R+T LA AG
Sbjct: 193 GKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAGPV 252
Query: 152 GNSTNNPV---DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFA 208
+ + RKIFV NV +++ KLL FA +GEIEEGPLG DK TGKPKGFA
Sbjct: 253 PAPPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFA 312
Query: 209 LFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
LFVYK+ E ++ AL +P K +G L+C+ A
Sbjct: 313 LFVYKSIESSRRALEEPHKIFEGHTLHCQKA 343
>gi|168045478|ref|XP_001775204.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673417|gb|EDQ59940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 167
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 134/169 (79%), Gaps = 2/169 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RK+F+RGLGWD+TTE L+++FS +GE+EE V++DK TGKS+G+GF+TF H+DGA +LK
Sbjct: 1 RKIFVRGLGWDSTTETLKTVFSQFGEVEEGAVVMDKGTGKSRGFGFVTFIHMDGAQRSLK 60
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
EPSK+IDGR+T LA G + N +VS RKI+VGN+ D+SAD+LLA FA YGEI
Sbjct: 61 EPSKRIDGRMTDCQLASTGALQINPNQ--EVSTRKIYVGNISLDLSADRLLAFFAGYGEI 118
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
EGPLGFDK TG+ +GFALF+YKT E + AL++PIKT+DG Q+ C+LA
Sbjct: 119 GEGPLGFDKFTGRSRGFALFIYKTVEATKRALLEPIKTLDGIQMYCKLA 167
>gi|242056941|ref|XP_002457616.1| hypothetical protein SORBIDRAFT_03g010380 [Sorghum bicolor]
gi|241929591|gb|EES02736.1| hypothetical protein SORBIDRAFT_03g010380 [Sorghum bicolor]
Length = 464
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/228 (49%), Positives = 140/228 (61%), Gaps = 15/228 (6%)
Query: 27 PQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEG 86
P + +++ DQL+++L A H DVL ++R +ADADP QRK+F+ GLGWD TT+
Sbjct: 89 PASIQALLDSFPKDQLVELLRDAAVAHGDVLSAIRHVADADPAQRKIFVHGLGWDATTDT 148
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
L F YG++E+ V+ D+ TGK KGYGFI F+H GA AL+EP KKI R T LA
Sbjct: 149 LSEAFGPYGDIEDLRVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQLA 208
Query: 147 VAG-------NSGNSTNNPVDVSL--------RKIFVGNVPNDMSADKLLAHFACYGEIE 191
G NS + P + L RKIFV NV D+ KLL FA YGEIE
Sbjct: 209 SVGPVPGGAPNSAGAVPAPAQLHLPPVSEYTQRKIFVSNVGADIDPKKLLQFFARYGEIE 268
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
EGPLG DK TGKPKGFALFVYKT E A+ AL +P K DG L+C+ A
Sbjct: 269 EGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFDGVVLHCQKA 316
>gi|326532214|dbj|BAK01483.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 169/302 (55%), Gaps = 24/302 (7%)
Query: 27 PQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEG 86
P ++++E +QL+++L A H DVLESVR ADADP QRK+F+ GLGWDTT +
Sbjct: 112 PASIQELLEVFPKEQLVELLRDAAVGHRDVLESVRRAADADPAQRKIFVHGLGWDTTVDI 171
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
L F YGE+E+ ++ D+ TGK KGYGFI F+ GA AL EP KKI R T LA
Sbjct: 172 LTEAFRPYGEIEDLKLVSDRNTGKCKGYGFILFRRRSGARAALLEPQKKIGNRTTSCQLA 231
Query: 147 VAG--NSGNSTNNPV------------------DVSLRKIFVGNVPNDMSADKLLAHFAC 186
G SG + NNP+ + + RKIFV NV D+ KLL F+
Sbjct: 232 SLGPVPSGGAANNPMLATAPALAPAALILPPVSEYTQRKIFVSNVGADIDPQKLLQFFSK 291
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
YGEIEEGPLG DK TGKPKGFALFVY+T EGA+ AL +P K+ +G L+C+ A + P
Sbjct: 292 YGEIEEGPLGLDKATGKPKGFALFVYRTLEGAKKALQEPHKSFEGVVLHCQKAID---GP 348
Query: 247 MGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQV 306
GGG G + G S+ S G G GY + P L + GGPG
Sbjct: 349 KPNRGGGHGATTTIERKGAAGYSASS-RSLPGNVGAGYGMASPASLSSMPGAVPGGPGMN 407
Query: 307 PS 308
P+
Sbjct: 408 PA 409
>gi|326506732|dbj|BAJ91407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 169/302 (55%), Gaps = 24/302 (7%)
Query: 27 PQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEG 86
P ++++E +QL+++L A H DVLESVR ADADP QRK+F+ GLGWDTT +
Sbjct: 112 PASIQELLEVFPKEQLVELLRDAAVGHRDVLESVRRAADADPAQRKIFVHGLGWDTTVDI 171
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
L F YGE+E+ ++ D+ TGK KGYGFI F+ GA AL EP KKI R T LA
Sbjct: 172 LTEAFRPYGEIEDLKLVSDRNTGKCKGYGFILFRRRSGARAALLEPQKKIGNRTTSCQLA 231
Query: 147 VAG--NSGNSTNNPV------------------DVSLRKIFVGNVPNDMSADKLLAHFAC 186
G SG + NNP+ + + RKIFV NV D+ KLL F+
Sbjct: 232 SLGPVPSGGAANNPMLATAPALAPAALILPPVSEYTQRKIFVSNVGADIDPQKLLQFFSK 291
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
YGEIEEGPLG DK TGKPKGFALFVY+T EGA+ AL +P K+ +G L+C+ A + P
Sbjct: 292 YGEIEEGPLGLDKATGKPKGFALFVYRTLEGAKKALQEPHKSFEGVVLHCQKAID---GP 348
Query: 247 MGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQV 306
GGG G + G S+ S G G GY + P L + GGPG
Sbjct: 349 KPNRGGGHGATTTIERKGAAGYSASS-RSLPGNVGAGYGMASPASLSSMPGAVPGGPGMN 407
Query: 307 PS 308
P+
Sbjct: 408 PA 409
>gi|414876937|tpg|DAA54068.1| TPA: RNA binding protein isoform 1 [Zea mays]
gi|414876938|tpg|DAA54069.1| TPA: RNA binding protein isoform 2 [Zea mays]
Length = 454
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 183/335 (54%), Gaps = 34/335 (10%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ +++ DQL+++L A H DVL ++R +ADADP QRK+F+ GLGWDTTT+ L
Sbjct: 85 QALLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTTDTLTEA 144
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA---- 146
F YGE+E+ V+ D+ TGK KGYGFI F+H GA AL+EP KKI R T LA
Sbjct: 145 FGPYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQLASVGP 204
Query: 147 VAGNSGNSTN-NPVDVSL--------RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGF 197
V G + NS PV + L RKIFV NV D+ KLL FA +GEIEEGPLG
Sbjct: 205 VPGGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIEEGPLGL 264
Query: 198 DKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA-DNKKAKPMGPDG----- 251
DK TGKPKGFALFVYKT E A+ AL +P K +G L+C+ A D K +G G
Sbjct: 265 DKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGPKPNKLGGAGGFFGA 324
Query: 252 ---------GGPGNVSMNHGDGMGMVPPS---AGGSYGGPGGHGYPFSGPPPLGHHLNSS 299
G G S + +G+V P A G PGG P LG L +
Sbjct: 325 GASSGGKGFAGYGATSHSLPGTVGIVQPMSPLAPGLASLPGGISAAPGVDPALGQALTAL 384
Query: 300 LG---GPGQVPSSMGGVGAGGYGAGLGGPYGGYGG 331
L G G +S+ GVGA G G GP G GG
Sbjct: 385 LATQQGGGLSFNSILGVGANGSGLPPQGPTGALGG 419
>gi|226531394|ref|NP_001149939.1| RNA binding protein [Zea mays]
gi|195635617|gb|ACG37277.1| RNA binding protein [Zea mays]
Length = 455
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 183/335 (54%), Gaps = 34/335 (10%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ +++ DQL+++L A H DVL ++R +ADADP QRK+F+ GLGWDTTT+ L
Sbjct: 86 QALLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTTDTLTEA 145
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA---- 146
F YGE+E+ V+ D+ TGK KGYGFI F+H GA AL+EP KKI R T LA
Sbjct: 146 FGPYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQLASVGP 205
Query: 147 VAGNSGNSTN-NPVDVSL--------RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGF 197
V G + NS PV + L RKIFV NV D+ KLL FA +GEIEEGPLG
Sbjct: 206 VPGGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIEEGPLGL 265
Query: 198 DKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA-DNKKAKPMGPDG----- 251
DK TGKPKGFALFVYKT E A+ AL +P K +G L+C+ A D K +G G
Sbjct: 266 DKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGPKPNKLGGAGGFFGA 325
Query: 252 ---------GGPGNVSMNHGDGMGMVPPS---AGGSYGGPGGHGYPFSGPPPLGHHLNSS 299
G G S + +G+V P A G PGG P LG L +
Sbjct: 326 GASSGGKGFAGYGATSHSLPGTVGIVQPMSPLAPGLASLPGGISAAPGVDPALGQALTAL 385
Query: 300 LG---GPGQVPSSMGGVGAGGYGAGLGGPYGGYGG 331
L G G +S+ GVGA G G GP G GG
Sbjct: 386 LATQQGGGLSFNSILGVGANGSGLPPQGPTGALGG 420
>gi|225441409|ref|XP_002278602.1| PREDICTED: DAZ-associated protein 1-like [Vitis vinifera]
Length = 355
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 165/247 (66%), Gaps = 12/247 (4%)
Query: 1 MDSIKKRKIDE--NGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
M+ +KKRK++E NG + S +P++ + +++ L+ QL+D+LS +++ + E
Sbjct: 14 MEDLKKRKLEEASNGQISS--------SPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAE 65
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
++S+A ADP RKLF+RGL W+TT+E L + F +GE+EE VI+DK TGKS+GYGFIT
Sbjct: 66 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFIT 125
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+KH++ AL+ PSK IDGR+ V NLA G SG ST D + RK+++G + D++++
Sbjct: 126 YKHMESTQSALQAPSKLIDGRMAVCNLACEGLSGASTTP--DQAQRKLYIGGLAPDVTSE 183
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
LL+ F +GEIEEG + +DK+T + +GF YKT E A+ A+ DP K + G+ + +L
Sbjct: 184 VLLSFFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKL 243
Query: 239 ADNKKAK 245
AD+ K K
Sbjct: 244 ADSHKGK 250
>gi|297739851|emb|CBI30033.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 165/247 (66%), Gaps = 12/247 (4%)
Query: 1 MDSIKKRKIDE--NGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
M+ +KKRK++E NG + S +P++ + +++ L+ QL+D+LS +++ + E
Sbjct: 1 MEDLKKRKLEEASNGQISS--------SPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAE 52
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
++S+A ADP RKLF+RGL W+TT+E L + F +GE+EE VI+DK TGKS+GYGFIT
Sbjct: 53 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFIT 112
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+KH++ AL+ PSK IDGR+ V NLA G SG ST D + RK+++G + D++++
Sbjct: 113 YKHMESTQSALQAPSKLIDGRMAVCNLACEGLSGASTTP--DQAQRKLYIGGLAPDVTSE 170
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
LL+ F +GEIEEG + +DK+T + +GF YKT E A+ A+ DP K + G+ + +L
Sbjct: 171 VLLSFFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKL 230
Query: 239 ADNKKAK 245
AD+ K K
Sbjct: 231 ADSHKGK 237
>gi|194700464|gb|ACF84316.1| unknown [Zea mays]
Length = 410
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 183/335 (54%), Gaps = 34/335 (10%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ +++ DQL+++L A H DVL ++R +ADADP QRK+F+ GLGWDTTT+ L
Sbjct: 41 QALLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTTDTLTEA 100
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA---- 146
F YGE+E+ V+ D+ TGK KGYGFI F+H GA AL+EP KKI R T LA
Sbjct: 101 FGPYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQLASVGP 160
Query: 147 VAGNSGNSTN-NPVDVSL--------RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGF 197
V G + NS PV + L RKIFV NV D+ KLL FA +GEIEEGPLG
Sbjct: 161 VPGGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIEEGPLGL 220
Query: 198 DKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA-DNKKAKPMGPDG----- 251
DK TGKPKGFALFVYKT E A+ AL +P K +G L+C+ A D K +G G
Sbjct: 221 DKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGPKPNKLGGAGGFFGA 280
Query: 252 ---------GGPGNVSMNHGDGMGMVPPS---AGGSYGGPGGHGYPFSGPPPLGHHLNSS 299
G G S + +G+V P A G PGG P LG L +
Sbjct: 281 GASSGGKGFAGYGATSHSLPGTVGIVQPMSPLAPGLASLPGGISAAPGVDPALGQALTAL 340
Query: 300 LG---GPGQVPSSMGGVGAGGYGAGLGGPYGGYGG 331
L G G +S+ GVGA G G GP G GG
Sbjct: 341 LATQQGGGLSFNSILGVGANGSGLPPQGPTGALGG 375
>gi|297824045|ref|XP_002879905.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297325744|gb|EFH56164.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 447
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 172/318 (54%), Gaps = 26/318 (8%)
Query: 33 IVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFS 92
++E + DQLL +L A RH DV +R +AD D RK+F+ GLGWDT E L F
Sbjct: 85 LLEPFSKDQLLILLKEAAERHSDVANRIRIVADEDSVHRKIFVHGLGWDTKAETLIEAFK 144
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSG 152
YGE+E+ ++DK +G+SKGYGFI FK GA ALK+P KKI R+T LA G
Sbjct: 145 QYGEIEDCKCVVDKISGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQ 204
Query: 153 NS-------TNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPK 205
+ NP +V RKI+V NV D+ KLL F+ +GEIEEGPLG DK TG+PK
Sbjct: 205 GTPVVAPAQHFNPENVQ-RKIYVSNVSADLDPQKLLEFFSRFGEIEEGPLGLDKVTGRPK 263
Query: 206 GFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGM 265
GFALFVY++ E A+ AL +P KT +G L+C A++ GP + N +
Sbjct: 264 GFALFVYRSLESAKKALEEPHKTFEGHVLHCHKAND------GPKQVKQHQHNHNSHNQN 317
Query: 266 GMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQVPSSMGGVGAGGYGAGLGGP 325
+ YG PGGHG+ +G N ++ GQ +++ + + G G GL
Sbjct: 318 SRYQRNDSNGYGAPGGHGHFIAGNNQAAQAFNPAI---GQALTAL--LASQGAGLGLNQA 372
Query: 326 YG-------GYGGPGSTG 336
+G G PG+ G
Sbjct: 373 FGQALLGTLGTASPGAVG 390
>gi|194698020|gb|ACF83094.1| unknown [Zea mays]
gi|414876935|tpg|DAA54066.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea mays]
gi|414876936|tpg|DAA54067.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea mays]
Length = 379
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 141/220 (64%), Gaps = 13/220 (5%)
Query: 33 IVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFS 92
+++ DQL+++L A H DVL ++R +ADADP QRK+F+ GLGWDTTT+ L F
Sbjct: 87 LLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTTDTLTEAFG 146
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA----VA 148
YGE+E+ V+ D+ TGK KGYGFI F+H GA AL+EP KKI R T LA V
Sbjct: 147 PYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQLASVGPVP 206
Query: 149 GNSGNSTN-NPVDVSL--------RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDK 199
G + NS PV + L RKIFV NV D+ KLL FA +GEIEEGPLG DK
Sbjct: 207 GGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIEEGPLGLDK 266
Query: 200 QTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
TGKPKGFALFVYKT E A+ AL +P K +G L+C+ A
Sbjct: 267 VTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKA 306
>gi|414876934|tpg|DAA54065.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea mays]
Length = 372
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 141/220 (64%), Gaps = 13/220 (5%)
Query: 33 IVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFS 92
+++ DQL+++L A H DVL ++R +ADADP QRK+F+ GLGWDTTT+ L F
Sbjct: 87 LLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTTDTLTEAFG 146
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA----VA 148
YGE+E+ V+ D+ TGK KGYGFI F+H GA AL+EP KKI R T LA V
Sbjct: 147 PYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQLASVGPVP 206
Query: 149 GNSGNSTN-NPVDVSL--------RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDK 199
G + NS PV + L RKIFV NV D+ KLL FA +GEIEEGPLG DK
Sbjct: 207 GGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIEEGPLGLDK 266
Query: 200 QTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
TGKPKGFALFVYKT E A+ AL +P K +G L+C+ A
Sbjct: 267 VTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKA 306
>gi|15226817|ref|NP_181639.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|145331087|ref|NP_001078035.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16612302|gb|AAL27512.1|AF439844_1 At2g41060/T3K9.17 [Arabidopsis thaliana]
gi|3402711|gb|AAD12005.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22137136|gb|AAM91413.1| At2g41060/T3K9.17 [Arabidopsis thaliana]
gi|110742573|dbj|BAE99200.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254826|gb|AEC09920.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330254827|gb|AEC09921.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 451
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 178/325 (54%), Gaps = 21/325 (6%)
Query: 33 IVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFS 92
++E + DQLL +L A RH DV +R +AD D RK+F+ GLGWDT + L F
Sbjct: 90 LLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFK 149
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA----VA 148
YGE+E+ ++DK +G+SKGYGFI FK GA ALK+P KKI R+T LA V
Sbjct: 150 QYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQ 209
Query: 149 GN---SGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPK 205
GN + NP +V RKI+V NV D+ KLL F+ +GEIEEGPLG DK TG+PK
Sbjct: 210 GNPVVAPAQHFNPENVQ-RKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPK 268
Query: 206 GFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGM 265
GFALFVY++ E A+ AL +P KT +G L+C A++ GP + N +
Sbjct: 269 GFALFVYRSLESAKKALEEPHKTFEGHVLHCHKAND------GPKQVKQHQHNHNSHNQN 322
Query: 266 GMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQVPSSMGGVGAGGYGAGLGGP 325
+ YG PGGHG+ +G N ++ GQ +++ + + G G GL
Sbjct: 323 SRYQRNDNNGYGAPGGHGHFIAGNNQAVQAFNPAI---GQALTAL--LASQGAGLGLNQA 377
Query: 326 YGG--YGGPGSTGYGGLGGAGGGAG 348
+G G G+ G +GG G G
Sbjct: 378 FGQALLGTLGTASPGAVGGMPSGYG 402
>gi|255577238|ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223531017|gb|EEF32870.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 462
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 163/288 (56%), Gaps = 27/288 (9%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
K++E +QL+++L A H DV + +R IADADP RK+F+ GLGWDT+ E L +
Sbjct: 89 EKLLEPFGKEQLINLLREAADTHRDVADHIRKIADADPVHRKIFVHGLGWDTSAETLTNA 148
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA---- 146
F YGE+E+ + DK +GKSKGYGFI FK GA AL+EP KKI R+T LA
Sbjct: 149 FKQYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALQEPQKKIGNRMTACQLASIGP 208
Query: 147 -----VAGNSGNSTNNPV-----DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLG 196
A ++ ++++P D + RKI+V NV D+ +L F+ +GEIEEGPLG
Sbjct: 209 VPVGQAAASAVTTSHHPQHQQVSDYTRRKIYVSNVAADLDPKELTNFFSKFGEIEEGPLG 268
Query: 197 FDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGN 256
DK TGKPKGF LFVYK+AE A+ AL +P K+ +G L+C+ A + GP G P
Sbjct: 269 LDKLTGKPKGFCLFVYKSAESAKRALEEPHKSFEGHMLHCQKAID------GPKHGKPQQ 322
Query: 257 VSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPG 304
H + S G PG G SGP H + + GGPG
Sbjct: 323 QQQQHYNAQ----KSHFQRNGNPGYSGGTASGP---SHLMAPAAGGPG 363
>gi|312281743|dbj|BAJ33737.1| unnamed protein product [Thellungiella halophila]
Length = 479
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 156/272 (57%), Gaps = 23/272 (8%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ ++E + +QLL++L A +H DV +R +AD DP RK+F+ GLGWDT TE L
Sbjct: 105 KDLLEPFSKEQLLNLLKEAAGKHLDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEA 164
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG- 149
F YGE+E+ + DK +GKSKGYGFI +K GA ALK+P KKI R+T LA G
Sbjct: 165 FKQYGEIEDCKAVFDKVSGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGP 224
Query: 150 -----------NSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFD 198
+ + ++ + + +KI+V NV ++ KLLA F+ +GEIEEGPLG D
Sbjct: 225 VFGGNPVAAAASVVPAQHSNSEHTQKKIYVSNVGAELDPQKLLAFFSRFGEIEEGPLGLD 284
Query: 199 KQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN--KKAKPMGPDGGGPGN 256
K TG+PKGF LFVYK+ E A+ AL +P KT +G L+C+ A + K KP + N
Sbjct: 285 KFTGRPKGFCLFVYKSPESAKRALEEPHKTFEGHILHCQKAIDGPKPGKPQQYNTHNHNN 344
Query: 257 VSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSG 288
D G YG PGGHG+ +G
Sbjct: 345 PRFQRNDNNG---------YGAPGGHGHLMAG 367
>gi|449461439|ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211535 [Cucumis sativus]
gi|449503048|ref|XP_004161816.1| PREDICTED: uncharacterized protein LOC101228786 [Cucumis sativus]
Length = 500
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 145/238 (60%), Gaps = 16/238 (6%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
K++E T DQL+++L A +H DV +R +ADADP+ RK+F+ GLGWDT E L ++
Sbjct: 127 HKLLEPFTKDQLINLLREAADKHVDVAGRIRMVADADPSHRKIFVHGLGWDTNAETLINV 186
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG- 149
F +GE+E+ + DK +GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 187 FKQFGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALKEPQKKIGNRMTACQLASVGP 246
Query: 150 -NSGNSTNNPV-----DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGK 203
+ N+ P + + RKI+V NV D+ KLLA F+ +GE++EGPLG DK TGK
Sbjct: 247 VPTTNAVAAPQVPPASEYTQRKIYVSNVGADVDPQKLLAFFSQFGEVDEGPLGLDKMTGK 306
Query: 204 PKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNH 261
PKGF LFVYK+ E A+ AL +P K +G L+C+ A DG PG H
Sbjct: 307 PKGFCLFVYKSIESAKKALEEPHKNFEGHVLHCQKAI---------DGPKPGKAQHQH 355
>gi|224086681|ref|XP_002307930.1| predicted protein [Populus trichocarpa]
gi|222853906|gb|EEE91453.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 142/235 (60%), Gaps = 16/235 (6%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
K++E DQL+++L A H DV + +R +AD DP RK+F+ GLGWDT E L +
Sbjct: 90 EKLLEPFGKDQLINLLREAADGHRDVADKIRQVADQDPVHRKIFVHGLGWDTNAEALINA 149
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG- 149
F YGE+E+ + DK TGKSKGYGFI FK GA ALKEP KKI R+ LA G
Sbjct: 150 FKPYGEIEDCKAVCDKVTGKSKGYGFILFKKRSGARNALKEPQKKIGNRMAACQLASTGP 209
Query: 150 ------------NSGNSTNNPV-DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLG 196
+ T PV + +LRKI+V NV ++ KL++ F+ +GEIEEGPLG
Sbjct: 210 VPQSSAGPSGPIAAAAQTQQPVSEYTLRKIYVSNVGANLDPQKLMSFFSEFGEIEEGPLG 269
Query: 197 FDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN--KKAKPMGP 249
DK TGKPKGF LFVYKT E A+ AL +P K+ +G L+C+ A + K AK P
Sbjct: 270 LDKATGKPKGFCLFVYKTVESAKKALEEPHKSFEGHILHCQKAVDGPKHAKSQKP 324
>gi|356572088|ref|XP_003554202.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Glycine max]
Length = 336
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 168/266 (63%), Gaps = 18/266 (6%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESV 60
M+ +KKRK++ + A +L S L R ++E L QL+D+L+ +++ + E +
Sbjct: 1 MEGLKKRKLELDEAGNGELASKEEL-----RFLIEPLAKPQLVDLLAKLGSQYPSIAEEI 55
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
+SIA ADP RKLF+RGL W+TT+E LR+ F +GE+EE VI DK TGKS+GYGFITFK
Sbjct: 56 KSIASADPAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIFDKVTGKSRGYGFITFK 115
Query: 121 HIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKL 180
+++ AL+ PSK IDGR+ V NLA SG T++ D+SLRK+++G++ +++++ L
Sbjct: 116 NMESTQQALRAPSKLIDGRLAVCNLACESLSG--TSSAPDLSLRKLYIGSLSPEVTSEIL 173
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
L +FA +GEIEEG + +D+ T + +GF YKTAE A+ A+ D K + G+ + + AD
Sbjct: 174 LNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDDVEKMLGGRNIVVKYAD 233
Query: 241 NKKAK-----------PMGPDGGGPG 255
+ K K PM P PG
Sbjct: 234 SHKGKTGQPPFPSGVVPMAPLPMNPG 259
>gi|297596504|ref|NP_001042672.2| Os01g0265800 [Oryza sativa Japonica Group]
gi|255673092|dbj|BAF04586.2| Os01g0265800, partial [Oryza sativa Japonica Group]
Length = 524
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 143/233 (61%), Gaps = 21/233 (9%)
Query: 28 QDARKIVERLTS---DQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
+DA I L S DQL+++LS+A H+DVL +V ADADP RK+F+ GLGWD T
Sbjct: 144 RDADSIQALLNSFPKDQLVELLSAAALSHEDVLTAVHRAADADPALRKIFVHGLGWDATA 203
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTN 144
E L FSAYGE+E+ V+ D+ATGK KGYGFI F GA AL+EP KKI R T
Sbjct: 204 ETLTEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSRRSGARAALREPQKKIGNRTTACQ 263
Query: 145 LAVAGNS---GNSTNN--------------PV-DVSLRKIFVGNVPNDMSADKLLAHFAC 186
LA G G +TN PV + + RKIFV NV D+ KLL F+
Sbjct: 264 LASVGPVPPGGMATNPAPAVAPAPAQLALPPVSEYTQRKIFVSNVGADIDPQKLLQFFSK 323
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YGEIEEGPLG DK TGKPKGFALFVYKT + A+ AL +P K +G L+C+ A
Sbjct: 324 YGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEGVVLHCQKA 376
>gi|6815067|dbj|BAA90354.1| putative UBP1 interacting protein 1a [Oryza sativa Japonica Group]
gi|125525303|gb|EAY73417.1| hypothetical protein OsI_01299 [Oryza sativa Indica Group]
gi|125569833|gb|EAZ11348.1| hypothetical protein OsJ_01215 [Oryza sativa Japonica Group]
gi|215712214|dbj|BAG94341.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766461|dbj|BAG98769.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 490
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 143/233 (61%), Gaps = 21/233 (9%)
Query: 28 QDARKIVERLTS---DQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
+DA I L S DQL+++LS+A H+DVL +V ADADP RK+F+ GLGWD T
Sbjct: 110 RDADSIQALLNSFPKDQLVELLSAAALSHEDVLTAVHRAADADPALRKIFVHGLGWDATA 169
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTN 144
E L FSAYGE+E+ V+ D+ATGK KGYGFI F GA AL+EP KKI R T
Sbjct: 170 ETLTEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSRRSGARAALREPQKKIGNRTTACQ 229
Query: 145 LAVAGNS---GNSTNN--------------PV-DVSLRKIFVGNVPNDMSADKLLAHFAC 186
LA G G +TN PV + + RKIFV NV D+ KLL F+
Sbjct: 230 LASVGPVPPGGMATNPAPAVAPAPAQLALPPVSEYTQRKIFVSNVGADIDPQKLLQFFSK 289
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YGEIEEGPLG DK TGKPKGFALFVYKT + A+ AL +P K +G L+C+ A
Sbjct: 290 YGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEGVVLHCQKA 342
>gi|359806849|ref|NP_001241058.1| uncharacterized protein LOC100776344 [Glycine max]
gi|255634852|gb|ACU17785.1| unknown [Glycine max]
Length = 340
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 178/291 (61%), Gaps = 16/291 (5%)
Query: 1 MDSIKKRKI--DENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
M+ KKRK+ DE G D S L R ++E L QL+D+L+ +++ + E
Sbjct: 1 MEDFKKRKLELDEAGGD-GDFSSKEEL-----RFLIEPLAKPQLVDLLAKLGSQYPSIAE 54
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
++SIA ADP RKLF+RGL W+TT+E LR+ F +GE+EE VI DK TGKS+GYGFIT
Sbjct: 55 EIKSIASADPAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIYDKVTGKSRGYGFIT 114
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
FK+++ AL+ PSK IDGR+ V NLA SG T++ D+SLRK+++G++ +++++
Sbjct: 115 FKNMESTQQALRAPSKLIDGRLAVCNLACESLSG--TSSAPDLSLRKLYIGSLSPEVTSE 172
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
LL +FA +GEIEEG + +D+ T + +GF YKTAE A+ A+ D KT+ G+ + +
Sbjct: 173 ILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDDLEKTLGGRNIVVKY 232
Query: 239 ADNKKAK---PMGPDGGGP-GNVSMNHGDGMGMVPPSAGGSYGGPGGHGYP 285
AD++K K P P G P + MN G P A S P + YP
Sbjct: 233 ADSQKGKTGQPPFPAGVVPMAALPMN--PGYMQQPGKANVSSRPPINYSYP 281
>gi|356571847|ref|XP_003554083.1| PREDICTED: poly(U)-binding-splicing factor PUF60-B-like isoform 1
[Glycine max]
gi|356571849|ref|XP_003554084.1| PREDICTED: poly(U)-binding-splicing factor PUF60-B-like isoform 2
[Glycine max]
Length = 479
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 138/219 (63%), Gaps = 11/219 (5%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
K++E L+ DQLL +L A A+H DV E +R AD DP RK+F+ GLGWDTT L S F
Sbjct: 90 KLLEPLSKDQLLILLCEAAAKHQDVAERIRRAADEDPVHRKIFVHGLGWDTTAGTLISSF 149
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS 151
YGE+E+ + DK +GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 150 RQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGARNALKEPQKKIGNRMTACQLASIGPV 209
Query: 152 GN-----------STNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQ 200
N +++ + + +KI+V NV D+ KLLA F+ +GEIEEGPLG DK
Sbjct: 210 SNPPQTAPPAVAAPSSSVSEYTQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLGLDKA 269
Query: 201 TGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
TGKPKGF LFVY++ E A+ AL +P K +G L+C+ A
Sbjct: 270 TGKPKGFCLFVYRSPESARRALEEPHKDFEGHILHCQKA 308
>gi|21666573|gb|AAM73765.1|AF403292_1 RNA-binding protein AKIP1 [Vicia faba]
Length = 515
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 139/216 (64%), Gaps = 7/216 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ +VE T +Q+ +L A A+H DV + +R IAD D + RK+F+ GLGWDTT+ L +
Sbjct: 111 KDLVEPFTKEQIATLLCEAAAKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINA 170
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
FS YGE+E+ + DKA+GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 171 FSQYGEIEDCKAVTDKASGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGP 230
Query: 151 SGNSTNNPVDV-------SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGK 203
+ V + + RKI++ NV ++ KL A+F+ +GEIEEGPLG DK TGK
Sbjct: 231 VAQTPQPAVQLVQPGSEYTQRKIYISNVGPELDPHKLFAYFSRFGEIEEGPLGLDKATGK 290
Query: 204 PKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
PKGF LFVYK+AE A+ +L +P K +G L+C+ A
Sbjct: 291 PKGFCLFVYKSAESARRSLEEPHKEFEGHILHCQRA 326
>gi|356501354|ref|XP_003519490.1| PREDICTED: uncharacterized protein LOC100792637 [Glycine max]
Length = 496
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 135/213 (63%), Gaps = 3/213 (1%)
Query: 30 ARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRS 89
K++E T +QL +++ AV + ++SVR IAD DP RK+F+ GLGWD T E L S
Sbjct: 130 VEKLLEPFTKEQLHSLVTQAVDMFPEFVDSVRRIADVDPAHRKIFVHGLGWDATAETLTS 189
Query: 90 IFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG 149
+F YGE+E+ + DK +GKSKGY FI FKH D A ALK P KKI R T LA AG
Sbjct: 190 VFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALKHPQKKIGNRTTSCQLASAG 249
Query: 150 --NSGNSTNNPV-DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKG 206
+ + PV + + RKIFV NV ++ KLL F +GE+E+GPLG DK TGKPKG
Sbjct: 250 PVPAPPPSVTPVSEYTQRKIFVSNVSAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKG 309
Query: 207 FALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
FALFVYK+ E A+ AL +P K +G L C+ A
Sbjct: 310 FALFVYKSVESAKKALEEPNKNYEGHTLYCQKA 342
>gi|84468368|dbj|BAE71267.1| hypothetical protein [Trifolium pratense]
Length = 482
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 138/217 (63%), Gaps = 9/217 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+K++E T +Q+ +L A ++H DV + +R IAD D + RK+F+ GLGWDTT+ L +
Sbjct: 87 QKLIEPFTKEQIASLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINA 146
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
FS YGE+E+ + DK +GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 147 FSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGP 206
Query: 151 SGNSTNNPV--------DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTG 202
T PV + + RKI+V NV D+ KL F+ +GEIEEGPLG DK TG
Sbjct: 207 V-QQTPQPVPQLVPQGSEYTQRKIYVSNVGPDLDGSKLFGFFSRFGEIEEGPLGLDKVTG 265
Query: 203 KPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
KPKGF LFVYK+AE A+ AL +P K +G L+C+ A
Sbjct: 266 KPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQRA 302
>gi|224137878|ref|XP_002322674.1| predicted protein [Populus trichocarpa]
gi|222867304|gb|EEF04435.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 158/246 (64%), Gaps = 7/246 (2%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNRLTPQD-ARKIVERLTSDQLLDVLSSAVARHDDVLES 59
M+ +KKRK+DE S+ S T QD R +++ L QL+D+LS +++ + E
Sbjct: 1 MEDMKKRKMDEG----SNNGSGETSTTQDYLRSLLDPLNKSQLVDLLSRLGSQYPSIAEE 56
Query: 60 VRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
++ +A ADP RKLF+RGL W+TT+E L + F +GE+EE VI DKATGKS+GYGFIT+
Sbjct: 57 IKGLASADPVHRKLFVRGLAWNTTSETLCAAFQMHGEIEEGAVIYDKATGKSRGYGFITY 116
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADK 179
KH++ A AL PS+ ID R+ V NLA G +G ST D++ RK++VG + ++S++
Sbjct: 117 KHMESAQSALGAPSRLIDSRMAVCNLACEGLTGASTTP--DLAQRKLYVGGLSPEISSEM 174
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
LL F YG+IEEG + +DK T + +GF YKT E A+ A+ DP K G+ + +LA
Sbjct: 175 LLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPHKLFGGRTIIVKLA 234
Query: 240 DNKKAK 245
D ++K
Sbjct: 235 DTHRSK 240
>gi|84468340|dbj|BAE71253.1| hypothetical protein [Trifolium pratense]
Length = 414
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 138/217 (63%), Gaps = 9/217 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+K++E T +Q+ +L A ++H DV + +R IAD D + RK+F+ GLGWDTT+ L +
Sbjct: 19 QKLIEPFTKEQIASLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINA 78
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
FS YGE+E+ + DK +GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 79 FSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGP 138
Query: 151 SGNSTNNPV--------DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTG 202
T PV + + RKI+V NV D+ KL F+ +GEIEEGPLG DK TG
Sbjct: 139 V-QQTPQPVPQLVPQGSEYTQRKIYVSNVGPDLDGSKLFGFFSRFGEIEEGPLGLDKVTG 197
Query: 203 KPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
KPKGF LFVYK+AE A+ AL +P K +G L+C+ A
Sbjct: 198 KPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQRA 234
>gi|255562178|ref|XP_002522097.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538696|gb|EEF40297.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 478
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 137/217 (63%), Gaps = 10/217 (4%)
Query: 33 IVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFS 92
++E +QL+++L A +H DV + +R IADADP RK+F+ GLGWD+T E L + F
Sbjct: 97 LLEPFGKEQLVNLLKEASDKHRDVADRIRKIADADPAHRKIFVHGLGWDSTAETLTNAFK 156
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSG 152
YGE+E+ + DK +GKSKGYGFI FK GA AL+EP KKI R+T LA G
Sbjct: 157 QYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALEEPQKKIGNRMTACQLASMGPVP 216
Query: 153 NST---NNPV-------DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTG 202
ST N P + + RKI++ NV D+ +L + F+ +GEIEEGPLG DK TG
Sbjct: 217 TSTAPANTPAPGQQQVSEYTQRKIYISNVGADLDPQQLTSFFSKFGEIEEGPLGLDKLTG 276
Query: 203 KPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
KPKGF LFVYK+ E A+ AL +P K +G L+C+ A
Sbjct: 277 KPKGFCLFVYKSVESAKKALEEPHKNFEGHILHCQKA 313
>gi|242077350|ref|XP_002448611.1| hypothetical protein SORBIDRAFT_06g030090 [Sorghum bicolor]
gi|241939794|gb|EES12939.1| hypothetical protein SORBIDRAFT_06g030090 [Sorghum bicolor]
Length = 527
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/241 (44%), Positives = 146/241 (60%), Gaps = 27/241 (11%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
K++E L+ +QL+ +L +A + +VR A+ADP RKLF+ GLGW E LRS F
Sbjct: 73 KLLEPLSREQLVALLRTAAEASPATMAAVRRAAEADPASRKLFVHGLGWGAGAEDLRSAF 132
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG-- 149
S +GELE+ VI DK +G+SKGYGF+ F+ A+ AL P +I GR+ +LA +G
Sbjct: 133 SRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALSRPQLQIGGRLAFCHLAASGPA 192
Query: 150 ---------------NSGNSTNNPVDVS----------LRKIFVGNVPNDMSADKLLAHF 184
N+ +S+N + S RKIFVGNV D+ D+L +F
Sbjct: 193 PPASQSQNPSSNANTNANSSSNTTTNASGSSSSQPDNMQRKIFVGNVHADVDVDRLYEYF 252
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
A +GEIEEGPLGFDK TGKPKGFALFVY++AE A+ AL +P+K DGK LN + A + +
Sbjct: 253 AQFGEIEEGPLGFDKNTGKPKGFALFVYRSAESARRALEEPMKNFDGKTLNVQKAIDGRT 312
Query: 245 K 245
K
Sbjct: 313 K 313
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
D + RK+FV + A+ L + F+ +GE+E+ + DKQ+G+ KG+ ++++ A
Sbjct: 107 ADPASRKLFVHGLGWGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSA 166
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGG 278
AL P + G+ C LA + A P N + N ++G S
Sbjct: 167 LRALSRPQLQIGGRLAFCHLAASGPAPPASQSQNPSSNANTNANSSSNTTTNASGSSSSQ 226
Query: 279 P 279
P
Sbjct: 227 P 227
>gi|302769522|ref|XP_002968180.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
gi|300163824|gb|EFJ30434.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
Length = 296
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
Query: 51 ARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGK 110
+++ V + +R +A DP RKLF+RGL W+TT++ LR F +GE+EE VI+DKATGK
Sbjct: 13 SQYSAVADDIREVASKDPAHRKLFVRGLAWETTSQDLREAFEQFGEIEEGAVIIDKATGK 72
Query: 111 SKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGN 170
S+G+GFITFKH+D A ALKEPSK IDGR+TV NLA G SG+ N D + RK+++G
Sbjct: 73 SRGFGFITFKHMDSAQRALKEPSKTIDGRITVCNLASVGTSGSGGTN--DQAQRKLYIGG 130
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
+ + S + LL F+ YGEIEEG + +DK T K +GFA YKT E A+ A+ DP KT++
Sbjct: 131 LSYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAIDDPNKTIE 190
Query: 231 GKQLNCRLA 239
G+ + +LA
Sbjct: 191 GRHVIVKLA 199
>gi|356503320|ref|XP_003520458.1| PREDICTED: uncharacterized protein LOC100819802 [Glycine max]
Length = 523
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 137/219 (62%), Gaps = 11/219 (5%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
K++E L DQLL++L A A+H DV E +R AD DP RK+F+ GLGWDTT L S F
Sbjct: 130 KLLEPLGKDQLLNLLCDAAAKHRDVEERIRKAADGDPVHRKIFVHGLGWDTTAGTLISAF 189
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS 151
YGE+E+ + DK +GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 190 RQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGAQNALKEPQKKIGNRMTACQLASIGPV 249
Query: 152 GN-----------STNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQ 200
N +++ + + +KI+V NV D+ KLLA F+ +GEIEEGPLG DK
Sbjct: 250 SNPPPTPMAPSAAPSSSVSEYTQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLGLDKA 309
Query: 201 TGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
TGKPKGF LFVY+ E A+ AL +P K +G L+C+ A
Sbjct: 310 TGKPKGFCLFVYRNPESARRALEEPHKDFEGHILHCQKA 348
>gi|356554258|ref|XP_003545465.1| PREDICTED: uncharacterized protein LOC100783742 [Glycine max]
Length = 494
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 30 ARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRS 89
K++E T +QL +++ AV + ++SVR +AD DP RK+F+ GLGWD T + L +
Sbjct: 129 VEKLLEPFTKEQLHSLVTQAVDMFPEFVDSVRRLADVDPAHRKIFVHGLGWDATADTLTA 188
Query: 90 IFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG 149
+F YGE+E+ + DK +GKSKGY FI FKH D A ALK P KKI R T LA AG
Sbjct: 189 VFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALKHPQKKIGNRTTSCQLASAG 248
Query: 150 NSGNSTNNPVDVS---LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKG 206
N VS RKIFV NV ++ KLL F +GE+E+GPLG DK TGKPKG
Sbjct: 249 PVPAPPPNVTPVSEYTQRKIFVSNVNAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKG 308
Query: 207 FALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
FALFVYK+ E A+ AL +P K +G L C+ A
Sbjct: 309 FALFVYKSVESAKKALEEPHKNYEGHTLYCQKA 341
>gi|225436055|ref|XP_002276040.1| PREDICTED: uncharacterized protein LOC100263294 [Vitis vinifera]
Length = 457
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 137/209 (65%)
Query: 28 QDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGL 87
+ RK+++ DQ++ +L A + L + ++DP RK+F+ GLGWD T E L
Sbjct: 83 ETIRKLLQPFGKDQIIALLKEAADSNPATLSKILPAVESDPVHRKIFVHGLGWDATNETL 142
Query: 88 RSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
S F YG++EE V+ DK TG+SKGYGF+ FK GA ALK+P KKI R+ +LA
Sbjct: 143 TSAFKQYGQIEECNVVTDKITGRSKGYGFVLFKTRSGARKALKQPQKKIGNRMAACHLAA 202
Query: 148 AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGF 207
AG SG++ DV+ R+++VGNV +SA+KL FA +GEIE+GPLGFDK TGK +GF
Sbjct: 203 AGPSGSNPAAGADVNERRLYVGNVGPQISAEKLRTFFAKFGEIEDGPLGFDKATGKFRGF 262
Query: 208 ALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
A+ V+KTAEG + AL +PIKT + +L C
Sbjct: 263 AIIVFKTAEGMKRALEEPIKTFESCKLQC 291
>gi|297820462|ref|XP_002878114.1| hypothetical protein ARALYDRAFT_486125 [Arabidopsis lyrata subsp.
lyrata]
gi|297323952|gb|EFH54373.1| hypothetical protein ARALYDRAFT_486125 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 137/221 (61%), Gaps = 12/221 (5%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ ++E + +QLL +L A +H DV +R +AD DP RK+F+ GLGWDT TE L
Sbjct: 101 QDLLEPFSKEQLLSLLKEAAEKHPDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEA 160
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG- 149
F YGE+E+ + DK +GKSKGYGFI +K GA ALK+P KKI R+T LA G
Sbjct: 161 FKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGP 220
Query: 150 -----------NSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFD 198
S + ++ + + +KI+V NV ++ KLL F+ +GEIEEGPLG D
Sbjct: 221 VFGGASIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLGFFSKFGEIEEGPLGLD 280
Query: 199 KQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
K TG+PKGF LFVYK+AE A+ AL +P KT +G L+C+ A
Sbjct: 281 KFTGRPKGFCLFVYKSAESAKRALEEPHKTFEGHILHCQKA 321
>gi|225438611|ref|XP_002276585.1| PREDICTED: DAZ-associated protein 1-like [Vitis vinifera]
Length = 396
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 139/215 (64%), Gaps = 2/215 (0%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+K++E + DQL+ +S A A + + +R AD D + RK+F+ GLGWDTT E L +
Sbjct: 52 QKLLEPYSKDQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAA 111
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
F YG++E+ V+ D+ TGK+KGYGF+ FK GA+ ALK+P KKI+ R+T + LA G
Sbjct: 112 FEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGP 171
Query: 151 SGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALF 210
S + D RKI+V NV D+ ++L + FA +GEIE GP+GFD QTGK +GFALF
Sbjct: 172 SPPPQSQ--DTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALF 229
Query: 211 VYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
VYK E A+ AL DP + +G QL+C+ A K K
Sbjct: 230 VYKNQESARKALEDPYRIFEGHQLHCQKATEGKNK 264
>gi|326490764|dbj|BAJ90049.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505372|dbj|BAJ91121.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519588|dbj|BAK00167.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326530954|dbj|BAK01275.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 506
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 145/240 (60%), Gaps = 22/240 (9%)
Query: 28 QDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGL 87
+D K++E L+ +QL+ +L +A + +VR A+ DP RKLF+ GLGW E L
Sbjct: 67 EDVTKLLEPLSREQLVALLRAAAESSPATMAAVRRAAECDPASRKLFVHGLGWGAGVEDL 126
Query: 88 RSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
RS FS +GELE+ VI DK +GKSKGYGF+ F+ A+ AL+ P I GR+ +LA
Sbjct: 127 RSAFSRFGELEDCRVITDKQSGKSKGYGFVLFQSRTSALRALRRPQLSIGGRLAFCHLAA 186
Query: 148 AG------NSGNSTNNP----------------VDVSLRKIFVGNVPNDMSADKLLAHFA 185
+G S N ++N D RKIFVGNV D+ ++L +F+
Sbjct: 187 SGPAPPASQSQNPSSNASSGAANNSAPASSSSQADNMQRKIFVGNVHADVDVNRLYEYFS 246
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+GEIEEGPLGFDK TGKPKGFALFVYK+ + A+ AL +P+++ DGK LN + A + + K
Sbjct: 247 QFGEIEEGPLGFDKSTGKPKGFALFVYKSVDSARRALEEPMRSFDGKMLNVQKAIDGRTK 306
>gi|227202722|dbj|BAH56834.1| AT3G56860 [Arabidopsis thaliana]
Length = 478
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 143/243 (58%), Gaps = 21/243 (8%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ ++E + +Q+L +L A +H DV +R +AD DP RK+F+ GLGWDT TE L
Sbjct: 100 QDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEA 159
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG- 149
F YGE+E+ + DK +GKSKGYGFI +K GA ALK+P KKI R+T LA G
Sbjct: 160 FKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGP 219
Query: 150 -----------NSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFD 198
S + ++ + + +KI+V NV ++ KLL F+ +GEIEEGPLG D
Sbjct: 220 VFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLD 279
Query: 199 KQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVS 258
K TG+PKGF LFVYK++E A+ AL +P KT +G L+C+ A DG PG
Sbjct: 280 KYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKA---------IDGPKPGKQQ 330
Query: 259 MNH 261
+H
Sbjct: 331 QHH 333
>gi|449462878|ref|XP_004149162.1| PREDICTED: uncharacterized protein LOC101213550 [Cucumis sativus]
Length = 405
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 190/346 (54%), Gaps = 28/346 (8%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
K++E + QL++++ + + ++ +R+ AD D T RK+F+ GLGWDTT E L S+F
Sbjct: 50 KLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVF 109
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS 151
++GE+E+ V++D+ TGK+KGYGFI FK GA+ ALKEP KKI+ R+T LA G+
Sbjct: 110 ESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSV 169
Query: 152 GNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFV 211
+ +V RKI+V NV +++ A++L A FA +G++E GP+GFD +TGK +G+A+F+
Sbjct: 170 PPPQSQ--EVGPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFI 227
Query: 212 YKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGM-VPP 270
Y+T EGA+ AL +P K +G +L+C+ A K K S + +G P
Sbjct: 228 YRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQN---------STQAAESLGQNQTP 278
Query: 271 SAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGP---------GQVPSSMGGVGAGGYGAG 321
P F+ P L H + G P G VP S G+ GAG
Sbjct: 279 VMAAMAAAPNLQ--LFAQHPGLNHPVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAG 336
Query: 322 LGGPYGGYGGPGSTGYGGLGGAGGGAGAGGALGGAAGGLGGGSSLY 367
+G GY G GS G L + GG+ G+ G + L G +Y
Sbjct: 337 IG--LSGYSG-GSYGLSQL--SAGGSSLLGSYGPGSSSLKGLPHIY 377
>gi|18410591|ref|NP_567042.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|30694526|ref|NP_850710.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|30694529|ref|NP_850711.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|334186033|ref|NP_001190109.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|334186035|ref|NP_001190110.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|14194149|gb|AAK56269.1|AF367280_1 AT3g56860/T8M16_190 [Arabidopsis thaliana]
gi|9663005|emb|CAC00749.1| putative protein [Arabidopsis thaliana]
gi|14335132|gb|AAK59846.1| AT3g56860/T8M16_190 [Arabidopsis thaliana]
gi|19682816|emb|CAD28672.1| UBP1 interacting protein 2a [Arabidopsis thaliana]
gi|20259482|gb|AAM13861.1| unknown protein [Arabidopsis thaliana]
gi|21436451|gb|AAM51426.1| unknown protein [Arabidopsis thaliana]
gi|22137068|gb|AAM91379.1| At3g56860/T8M16_190 [Arabidopsis thaliana]
gi|30102516|gb|AAP21176.1| At3g56860/T8M16_190 [Arabidopsis thaliana]
gi|332646054|gb|AEE79575.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|332646055|gb|AEE79576.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|332646056|gb|AEE79577.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|332646057|gb|AEE79578.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|332646058|gb|AEE79579.1| UBP1-associated protein 2A [Arabidopsis thaliana]
Length = 478
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 143/243 (58%), Gaps = 21/243 (8%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ ++E + +Q+L +L A +H DV +R +AD DP RK+F+ GLGWDT TE L
Sbjct: 100 QDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEA 159
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG- 149
F YGE+E+ + DK +GKSKGYGFI +K GA ALK+P KKI R+T LA G
Sbjct: 160 FKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGP 219
Query: 150 -----------NSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFD 198
S + ++ + + +KI+V NV ++ KLL F+ +GEIEEGPLG D
Sbjct: 220 VFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLD 279
Query: 199 KQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVS 258
K TG+PKGF LFVYK++E A+ AL +P KT +G L+C+ A DG PG
Sbjct: 280 KYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAI---------DGPKPGKQQ 330
Query: 259 MNH 261
+H
Sbjct: 331 QHH 333
>gi|449509115|ref|XP_004163497.1| PREDICTED: uncharacterized protein LOC101228639, partial [Cucumis
sativus]
Length = 405
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 190/346 (54%), Gaps = 28/346 (8%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
K++E + QL++++ + + ++ +R+ AD D T RK+F+ GLGWDTT E L S+F
Sbjct: 50 KLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVF 109
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS 151
++GE+E+ V++D+ TGK+KGYGFI FK GA+ ALKEP KKI+ R+T LA G+
Sbjct: 110 ESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSV 169
Query: 152 GNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFV 211
+ +V RKI+V NV +++ A++L A FA +G++E GP+GFD +TGK +G+A+F+
Sbjct: 170 PPPQSQ--EVGPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFI 227
Query: 212 YKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGM-VPP 270
Y+T EGA+ AL +P K +G +L+C+ A K K S + +G P
Sbjct: 228 YRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQN---------STQAAESLGQNQTP 278
Query: 271 SAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGP---------GQVPSSMGGVGAGGYGAG 321
P F+ P L H + G P G VP S G+ GAG
Sbjct: 279 VMAAMAAAPNLQ--LFAQHPGLNHPVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAG 336
Query: 322 LGGPYGGYGGPGSTGYGGLGGAGGGAGAGGALGGAAGGLGGGSSLY 367
+G GY G GS G L + GG+ G+ G + L G +Y
Sbjct: 337 IG--LSGYSG-GSYGLSQL--SAGGSSLLGSYGPGSSSLKGLPHIY 377
>gi|87162862|gb|ABD28657.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
truncatula]
Length = 490
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 137/219 (62%), Gaps = 10/219 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+K++E + +Q+ +L A ++H DV + +R IAD D + RK+F+ GLGWDTT+ L +
Sbjct: 87 QKLLEPFSKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINA 146
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
FS YGE+E+ + DK +GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 147 FSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGP 206
Query: 151 SGNSTNNPV----------DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQ 200
+ + + RKI++ NV ++ A KL F+ +GEIEEGPLG DK
Sbjct: 207 VQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKV 266
Query: 201 TGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
TGKPKGF LFVYK+AE A+ AL +P K +G L+C+ A
Sbjct: 267 TGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305
>gi|14596195|gb|AAK68825.1| putative protein [Arabidopsis thaliana]
gi|20148397|gb|AAM10089.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 143/243 (58%), Gaps = 21/243 (8%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ ++E + +Q+L +L A +H DV +R +AD DP RK+F+ GLGWDT TE L
Sbjct: 100 QDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEA 159
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAG- 149
F YGE+E+ + DK +GKSKGYGFI +K GA ALK+P KKI R+T LA G
Sbjct: 160 FKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGP 219
Query: 150 -----------NSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFD 198
S + ++ + + +KI+V NV ++ KLL F+ +GEIEEGPLG D
Sbjct: 220 VFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLD 279
Query: 199 KQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVS 258
K TG+PKGF LFVYK++E A+ AL +P KT +G L+C+ A DG PG
Sbjct: 280 KYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKA---------IDGPKPGKQQ 330
Query: 259 MNH 261
+H
Sbjct: 331 QHH 333
>gi|226532486|ref|NP_001148086.1| LOC100281694 [Zea mays]
gi|195615710|gb|ACG29685.1| RNA-binding protein AKIP1 [Zea mays]
gi|413919663|gb|AFW59595.1| RNA-binding protein AKIP1 isoform 1 [Zea mays]
gi|413919664|gb|AFW59596.1| RNA-binding protein AKIP1 isoform 2 [Zea mays]
Length = 521
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 29/246 (11%)
Query: 28 QDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGL 87
+D K++E L+ +QL+ +L +A + +VR ++DP RKLF+ GLGW + E L
Sbjct: 68 EDIGKLLEPLSREQLVALLRTAAETSPATMAAVRRAVESDPASRKLFVHGLGWGASAEDL 127
Query: 88 RSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
RS FS +GELE+ VI DK +G+SKGYGF+ F+ A+ AL P +I GR+ +LA
Sbjct: 128 RSAFSCFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALSRPQLQIGGRLAFCHLAA 187
Query: 148 AG----------------------------NSGNSTNNPVDVSLRKIFVGNVPNDMSADK 179
+G SG+S++ P D RKIFVGNV D+ D+
Sbjct: 188 SGPAPPASQSQNPSSNPNTNANSNSNTTTNASGSSSSQP-DNMPRKIFVGNVHADVDVDR 246
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L +FA +GEIEEGP GFDK TGKPKGFALFVYK+ E A+ AL +P+K DGK LN + A
Sbjct: 247 LYNYFAQFGEIEEGPFGFDKNTGKPKGFALFVYKSVESARRALEEPMKNFDGKTLNVQKA 306
Query: 240 DNKKAK 245
+ + K
Sbjct: 307 IDGRTK 312
>gi|296083995|emb|CBI24383.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 137/209 (65%)
Query: 28 QDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGL 87
+ RK+++ DQ++ +L A + L + ++DP RK+F+ GLGWD T E L
Sbjct: 169 ETIRKLLQPFGKDQIIALLKEAADSNPATLSKILPAVESDPVHRKIFVHGLGWDATNETL 228
Query: 88 RSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
S F YG++EE V+ DK TG+SKGYGF+ FK GA ALK+P KKI R+ +LA
Sbjct: 229 TSAFKQYGQIEECNVVTDKITGRSKGYGFVLFKTRSGARKALKQPQKKIGNRMAACHLAA 288
Query: 148 AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGF 207
AG SG++ DV+ R+++VGNV +SA+KL FA +GEIE+GPLGFDK TGK +GF
Sbjct: 289 AGPSGSNPAAGADVNERRLYVGNVGPQISAEKLRTFFAKFGEIEDGPLGFDKATGKFRGF 348
Query: 208 ALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
A+ V+KTAEG + AL +PIKT + +L C
Sbjct: 349 AIIVFKTAEGMKRALEEPIKTFESCKLQC 377
>gi|223948117|gb|ACN28142.1| unknown [Zea mays]
gi|414585220|tpg|DAA35791.1| TPA: hypothetical protein ZEAMMB73_646207 [Zea mays]
gi|414585221|tpg|DAA35792.1| TPA: hypothetical protein ZEAMMB73_646207 [Zea mays]
Length = 521
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 142/238 (59%), Gaps = 24/238 (10%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
K++E L+ +QL+ +L +A + +VR +ADP RKLF+ GLGW E LRS F
Sbjct: 73 KLLEPLSREQLVALLRTAAEASPATMAAVRRAVEADPASRKLFVHGLGWGAGAEDLRSAF 132
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS 151
S +GELE+ VI DK +G+SKGYGF+ F+ A+ AL P +I GR+ +LA +G +
Sbjct: 133 SRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALNRPQLQIGGRLAFCHLAASGPA 192
Query: 152 G-NSTNNPV-----------------------DVSLRKIFVGNVPNDMSADKLLAHFACY 187
+ NP+ D RKIFVGNV D+ D+L +FA +
Sbjct: 193 PPAQSQNPISNANPNANSNSTSNASGSSSSQTDNIQRKIFVGNVHADVDVDRLYEYFAQF 252
Query: 188 GEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
GEIEEGPLGFDK TG+PKGFALFVYK+ E A+ AL +PIK DGK LN + A + + K
Sbjct: 253 GEIEEGPLGFDKNTGRPKGFALFVYKSVESARRALEEPIKNFDGKTLNVQKAIDGRTK 310
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D QRK+F+ + D + L F+ +GE+EE + DK TG+ KG+ +K ++ A
Sbjct: 225 DNIQRKIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGRPKGFALFVYKSVESAR 284
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNST 155
AL+EP K DG+ A+ G + S+
Sbjct: 285 RALEEPIKNFDGKTLNVQKAIDGRTKGSS 313
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + RK+FV + A+ L + F+ +GE+E+ + DKQ+G+ KG+ ++++ A
Sbjct: 108 DPASRKLFVHGLGWGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSAL 167
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKP 246
AL P + G+ C LA + A P
Sbjct: 168 RALNRPQLQIGGRLAFCHLAASGPAPP 194
>gi|357509097|ref|XP_003624837.1| RNA-binding protein [Medicago truncatula]
gi|355499852|gb|AES81055.1| RNA-binding protein [Medicago truncatula]
Length = 499
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 137/219 (62%), Gaps = 10/219 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+K++E + +Q+ +L A ++H DV + +R IAD D + RK+F+ GLGWDTT+ L +
Sbjct: 87 QKLLEPFSKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINA 146
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
FS YGE+E+ + DK +GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 147 FSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGP 206
Query: 151 SGNSTNNPV----------DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQ 200
+ + + RKI++ NV ++ A KL F+ +GEIEEGPLG DK
Sbjct: 207 VQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKV 266
Query: 201 TGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
TGKPKGF LFVYK+AE A+ AL +P K +G L+C+ A
Sbjct: 267 TGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305
>gi|357509099|ref|XP_003624838.1| RNA-binding protein [Medicago truncatula]
gi|355499853|gb|AES81056.1| RNA-binding protein [Medicago truncatula]
Length = 492
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 137/219 (62%), Gaps = 10/219 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+K++E + +Q+ +L A ++H DV + +R IAD D + RK+F+ GLGWDTT+ L +
Sbjct: 87 QKLLEPFSKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINA 146
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
FS YGE+E+ + DK +GKSKGYGFI FK GA ALKEP KKI R+T LA G
Sbjct: 147 FSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGP 206
Query: 151 SGNSTNNPV----------DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQ 200
+ + + RKI++ NV ++ A KL F+ +GEIEEGPLG DK
Sbjct: 207 VQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKV 266
Query: 201 TGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
TGKPKGF LFVYK+AE A+ AL +P K +G L+C+ A
Sbjct: 267 TGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
++ TQRK++I +G + + L FS +GE+EE + LDK TGK KG+ +K + A
Sbjct: 225 SEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESA 284
Query: 126 MLALKEPSKKIDGRVTVTNLAVAG 149
AL+EP K+ +G + A+ G
Sbjct: 285 RRALEEPHKEFEGHILHCQKAIDG 308
>gi|296082474|emb|CBI21479.3| unnamed protein product [Vitis vinifera]
Length = 373
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 139/215 (64%), Gaps = 2/215 (0%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+K++E + DQL+ +S A A + + +R AD D + RK+F+ GLGWDTT E L +
Sbjct: 66 QKLLEPYSKDQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAA 125
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
F YG++E+ V+ D+ TGK+KGYGF+ FK GA+ ALK+P KKI+ R+T + LA G
Sbjct: 126 FEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGP 185
Query: 151 SGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALF 210
S + D RKI+V NV D+ ++L + FA +GEIE GP+GFD QTGK +GFALF
Sbjct: 186 SPPPQSQ--DTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALF 243
Query: 211 VYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
VYK E A+ AL DP + +G QL+C+ A K K
Sbjct: 244 VYKNQESARKALEDPYRIFEGHQLHCQKATEGKNK 278
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
DVS RKIFV + D + + LLA F YG+IE+ + D+ TGK KG+ ++KT +GA
Sbjct: 102 DVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAV 161
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMGP 249
AL P GK++N R+ ++ A MGP
Sbjct: 162 KALKQP-----GKKINNRMTQSQLAS-MGP 185
>gi|357166238|ref|XP_003580645.1| PREDICTED: uncharacterized protein LOC100844841 [Brachypodium
distachyon]
Length = 510
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 142/242 (58%), Gaps = 29/242 (11%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
K++E L+ +QL+ +L A + +VR A+ DP RKLF+ GLGW E LRS F
Sbjct: 69 KLLEPLSREQLVALLRVAAETSPATMAAVRRAAETDPASRKLFVHGLGWGAGAEDLRSAF 128
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS 151
S +G+LE+ VI DK +GKSKGYGF+ F+ A+ AL+ P +I GR+ +LA +G +
Sbjct: 129 SRFGDLEDCRVISDKQSGKSKGYGFVLFRSRTAALRALRRPQLQIGGRIAFCHLAASGPA 188
Query: 152 ----------------------------GNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
S++ P D RKIFVGNV D+ D+L +
Sbjct: 189 PPSSQSQSQNPSSNNNANSNPGATNTAPATSSSQP-DNMPRKIFVGNVHADVDVDRLYEY 247
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F+ +GEIEEGPLGFDK TGKPKGFALFVYK+ E A+ AL +P++ DGK LN + A + +
Sbjct: 248 FSQFGEIEEGPLGFDKSTGKPKGFALFVYKSVESARRALEEPMRNFDGKMLNIQKAIDGR 307
Query: 244 AK 245
K
Sbjct: 308 TK 309
>gi|357493687|ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [Medicago truncatula]
gi|355518467|gb|AET00091.1| Heterogeneous nuclear ribonucleoprotein D0 [Medicago truncatula]
Length = 523
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 132/217 (60%), Gaps = 11/217 (5%)
Query: 30 ARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTE---- 85
K++E T +QL ++ AV ++ D+ E+VR +AD DP RK+F+ GLGWD T E
Sbjct: 124 VEKLLEPFTKEQLHALVKQAVEKYPDLSENVRQLADVDPAHRKIFVHGLGWDATAETLTT 183
Query: 86 GLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNL 145
FS YGE+E+ + DKA+GKSKGY FI FKH G ALK+P K I R T L
Sbjct: 184 ----TFSKYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALKQPQKVIGNRTTSCQL 239
Query: 146 AVAGNSGNSTNNPV---DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTG 202
A AG N + + RKIFV NV +D+ KLL F +GE+++GPLG DK TG
Sbjct: 240 ASAGPVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQFGEVDDGPLGLDKATG 299
Query: 203 KPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
KPKGFALFVYKT E A+ AL +P K +G L C+ A
Sbjct: 300 KPKGFALFVYKTVESAKKALEEPNKVFEGHTLYCQKA 336
>gi|224081210|ref|XP_002306336.1| predicted protein [Populus trichocarpa]
gi|222855785|gb|EEE93332.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 140/222 (63%), Gaps = 3/222 (1%)
Query: 27 PQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEG 86
P D ++E T DQL+D+++++ ++ + + AD D T R +F+ G WDTT +
Sbjct: 42 PADLSTLLEPYTKDQLIDLITNSAIKNPSLYSLIHQHADRDVTHRNVFVHGFSWDTTRQD 101
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
L S F+A+GE+EE V++DKATGK+KGYGF+ FK A+ ALKE + ++ R+ LA
Sbjct: 102 LVSAFAAFGEIEECNVVIDKATGKAKGYGFVLFKSRKAAISALKETKRMVNDRMASCQLA 161
Query: 147 VAGNSGNSTN---NPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGK 203
G++ ++ ++ +RKIFV NV +KL A F +GEIE GP+GFDK+TGK
Sbjct: 162 SVGSANAASAAKGKELEGGVRKIFVSNVGMSTDKEKLRAFFEKFGEIENGPIGFDKETGK 221
Query: 204 PKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+G+ALFVYKT EGA AL +P K +G+QL C +A K K
Sbjct: 222 SRGYALFVYKTVEGAIKALEEPHKIFEGQQLRCSVATEGKNK 263
>gi|168021263|ref|XP_001763161.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685644|gb|EDQ72038.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 141/210 (67%), Gaps = 2/210 (0%)
Query: 21 SPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGW 80
S +LT + + ++E L DQL+ +L A + V + +R IA DP RKLF+RGL W
Sbjct: 3 STVQLTRDELKSLLEPLNKDQLIALLIEAGSLFPAVADDIRDIASKDPVHRKLFVRGLAW 62
Query: 81 DTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRV 140
+T++ LR F YGE+EEA VI DK TGKS+G+GFITFKH+D A ALKEPSK IDGR+
Sbjct: 63 ETSSMALREAFEQYGEVEEACVITDKGTGKSRGFGFITFKHMDSAHRALKEPSKNIDGRI 122
Query: 141 TVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQ 200
TV NLA AG++ ++ D + RK+++G + D ++D LL F+ YGEIEEG + +DK
Sbjct: 123 TVCNLASAGSTSGTS--STDQAQRKLYIGGLSYDTTSDTLLNIFSQYGEIEEGAIAYDKN 180
Query: 201 TGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
T K +GFA +K+ EGA+ A+ D K+++
Sbjct: 181 TNKSRGFAFVTFKSIEGAKRAIEDSNKSIE 210
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 164 RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALV 223
RK+FV + + S+ L F YGE+EE + DK TGK +GF +K + A AL
Sbjct: 53 RKLFVRGLAWETSSMALREAFEQYGEVEEACVITDKGTGKSRGFGFITFKHMDSAHRALK 112
Query: 224 DPIKTVDGKQLNCRL 238
+P K +DG+ C L
Sbjct: 113 EPSKNIDGRITVCNL 127
>gi|224054494|ref|XP_002298288.1| predicted protein [Populus trichocarpa]
gi|222845546|gb|EEE83093.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 140/240 (58%), Gaps = 8/240 (3%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
KI++ T + L+ +L A + + + + D+DP RK+F+ GLGWD E L S+F
Sbjct: 90 KILQPFTKELLIKILKEAASTDPCIATEIFNSVDSDPVHRKIFVHGLGWDAHNETLISVF 149
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS 151
YGE+EE ++ DKATG+SKGYGF+ FK A ALKEP KK+ R LA G
Sbjct: 150 KKYGEIEECKIVTDKATGRSKGYGFLLFKTRIAARKALKEPQKKVGNRTVSCQLASLGKG 209
Query: 152 GNS-TNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALF 210
N +N DVSLRK+++GNV +S + L FA +GEIE+GP GFDK T K +GFA
Sbjct: 210 QNQKQDNSSDVSLRKLYIGNVGPQISVENLREFFAQFGEIEDGPSGFDKSTMKFRGFAFI 269
Query: 211 VYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPP 270
VYK+ EG + AL +P+K +G +L C L+ + GG G V + +G++ P
Sbjct: 270 VYKSLEGIRKALEEPVKVFEGLKLQCSLSTKNSS-------GGGGAVFLGQNPALGVLNP 322
>gi|212275065|ref|NP_001130367.1| uncharacterized protein LOC100191462 [Zea mays]
gi|194688948|gb|ACF78558.1| unknown [Zea mays]
Length = 424
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 128/213 (60%), Gaps = 24/213 (11%)
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
+ +VR +ADP RKLF+ GLGW E LRS FS +GELE+ VI DK +G+SKGYGF
Sbjct: 1 MAAVRRAVEADPASRKLFVHGLGWGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGF 60
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSG-NSTNNPV---------------- 159
+ F+ A+ AL P +I GR+ +LA +G + + NP+
Sbjct: 61 VLFRSRRSALRALNRPQLQIGGRLAFCHLAASGPAPPAQSQNPISNANPNANSNSTSNAS 120
Query: 160 -------DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVY 212
D RKIFVGNV D+ D+L +FA +GEIEEGPLGFDK TG+PKGFALFVY
Sbjct: 121 GSSSSQTDNIQRKIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGRPKGFALFVY 180
Query: 213 KTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
K+ E A+ AL +PIK DGK LN + A + + K
Sbjct: 181 KSVESARRALEEPIKNFDGKTLNVQKAIDGRTK 213
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D QRK+F+ + D + L F+ +GE+EE + DK TG+ KG+ +K ++
Sbjct: 126 QTDNIQRKIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGRPKGFALFVYKSVES 185
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNST 155
A AL+EP K DG+ A+ G + S+
Sbjct: 186 ARRALEEPIKNFDGKTLNVQKAIDGRTKGSS 216
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + RK+FV + A+ L + F+ +GE+E+ + DKQ+G+ KG+ ++++ A
Sbjct: 11 DPASRKLFVHGLGWGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSAL 70
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKP 246
AL P + G+ C LA + A P
Sbjct: 71 RALNRPQLQIGGRLAFCHLAASGPAPP 97
>gi|115460844|ref|NP_001054022.1| Os04g0636900 [Oryza sativa Japonica Group]
gi|21741248|emb|CAD41732.1| OSJNBb0034I13.9 [Oryza sativa Japonica Group]
gi|113565593|dbj|BAF15936.1| Os04g0636900 [Oryza sativa Japonica Group]
gi|215715302|dbj|BAG95053.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764985|dbj|BAG86682.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 515
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 143/237 (60%), Gaps = 23/237 (9%)
Query: 32 KIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
K++E L+ +QL+ +L +A + +VR A+ADP RKLF+ GLGW + LRS F
Sbjct: 75 KLLEPLSREQLVALLRTAAETTPATMAAVRRAAEADPASRKLFVHGLGWGAGADDLRSAF 134
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS 151
S +GELE+ VI DK +G+SKGYGF+ F+ A+ AL+ P +I GR+ +LA +G +
Sbjct: 135 SRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALRRPQLQIGGRLAFCHLAASGPA 194
Query: 152 --GNSTNNPV---------------------DVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+ + NP D RKIFVGNV D+ D+L +F+ +G
Sbjct: 195 PPTSQSQNPSSNTNANSGAANNAGSASSSQPDNMQRKIFVGNVHADVDVDRLYEYFSQFG 254
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
EIEEGPLGFDK TGKPKGFALFVYK+ E A+ AL +P + DGK LN + A + + K
Sbjct: 255 EIEEGPLGFDKTTGKPKGFALFVYKSVESARRALEEPTRNFDGKMLNVQKAIDGRTK 311
>gi|147845244|emb|CAN83373.1| hypothetical protein VITISV_028295 [Vitis vinifera]
Length = 443
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 180/373 (48%), Gaps = 49/373 (13%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+K++E + DQL+ +S A A + + +R AD D + RK+F+ GLGWDTT E L +
Sbjct: 52 QKLLEPYSKDQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAA 111
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
F YG++E+ V+ D+ TGK+KGYGF+ FK GA+ ALK+P KKI+ R+T + LA G
Sbjct: 112 FEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGP 171
Query: 151 SGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALF 210
S + D RKI+V NV D+ ++L + FA +GEIE GP+GFD QTGK +G
Sbjct: 172 SPPPQSQ--DTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGI--- 226
Query: 211 VYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK-PMGPDGGGPGNVSMNHGDGMGMVP 269
+G QL+C+ A K K P P + + M
Sbjct: 227 ------------------FEGHQLHCQKATEGKNKVPAQPQPQLAAVAATQ--NFMLSQH 266
Query: 270 PSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQVPSSMGG------VGAGGYGAGLG 323
P+ Y G L H N+S+ G V ++ G + + G+ +G
Sbjct: 267 PTLNTLYSG-------------LLAHPNASMIGAAAVNPAVAGAMNPGVISSSQVGSVIG 313
Query: 324 GP--YGGYGGPGSTGYGGLGGAGGGAGAGGALGGAAGGLGGGSSLYRLPPSSAGMPSGGY 381
GGYG G G+GG G G + L G SS+ R+ + G GGY
Sbjct: 314 SVEGLGGYGTHGVAGFGGTPSVLGPPSLGLQHAYPSTQL-GQSSVGRVQGTGVGT-FGGY 371
Query: 382 PEAGHYGLSSTSA 394
P Y LS T +
Sbjct: 372 PSYMWYDLSQTDS 384
>gi|242062238|ref|XP_002452408.1| hypothetical protein SORBIDRAFT_04g025205 [Sorghum bicolor]
gi|241932239|gb|EES05384.1| hypothetical protein SORBIDRAFT_04g025205 [Sorghum bicolor]
Length = 369
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 138/235 (58%), Gaps = 10/235 (4%)
Query: 28 QDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGL 87
+D +++E T D+LLD+L+ A R +L V + A +D R++F+ GLG T+ L
Sbjct: 55 EDIGRLLEPFTRDELLDLLTDACLRDPALLARVAASAVSDAAHRRIFVHGLGPGATSAAL 114
Query: 88 RSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
+ F +G L+E + D+ATG+ +GYGF+TF+ A AL + SK++DGR LA
Sbjct: 115 AAAFVPFGALDECHAVADRATGRCRGYGFVTFRRRSDACRALADSSKRVDGRPVACQLAS 174
Query: 148 AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGF 207
G + +++ S RK+FV NVP D L F+ +GEIEEGPLG D+ TG +G+
Sbjct: 175 LGPAAPASS----FSDRKLFVDNVPERAGRDDLRELFSKFGEIEEGPLGSDRATGLFRGY 230
Query: 208 ALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA-----DNKKAKPMGP-DGGGPGN 256
A+FVYKT EG + AL +P K DG +L+CRLA +K P P D G GN
Sbjct: 231 AIFVYKTPEGLRKALDEPTKVFDGCELHCRLAHRARKRKRKQAPAAPADNGEQGN 285
>gi|224284344|gb|ACN39907.1| unknown [Picea sitchensis]
Length = 536
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 108/145 (74%), Gaps = 8/145 (5%)
Query: 5 KKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIA 64
KKRK++E+ +T + A K++ LT +QL D+L A+ H D+L+ VR I+
Sbjct: 10 KKRKLEESNT--------PEITEEVAAKLLVPLTKEQLADILKPAIINHSDLLDKVRQIS 61
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
+ D + RKLF+RGLG++TTTE +S+F+ +GE+ +AVV++DK +GK+KGYGF+T++H+DG
Sbjct: 62 NQDISLRKLFVRGLGYETTTESFKSVFAQHGEVIDAVVVVDKISGKNKGYGFVTYRHLDG 121
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAG 149
A+ AL+EPSK++DGR+ V+NLA AG
Sbjct: 122 ALSALQEPSKEMDGRIVVSNLAAAG 146
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 136/310 (43%), Gaps = 69/310 (22%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
D SLR+I+VGNVP+DM L + F+ YG+IEEGP GFD+ TGK KG++L +Y+T E A
Sbjct: 236 TDASLRRIYVGNVPDDMKPATLTSFFSNYGDIEEGPGGFDRNTGKSKGYSLILYRTIEAA 295
Query: 219 QAALVDPIKTVDGKQLNCRLA----------DNKKAKPMGPDGGGPGNVSMNHGDGMG-- 266
AL DP+K++DG QL C+LA +A P D G S+NH G
Sbjct: 296 NRALEDPVKSIDGHQLFCKLAAEGLKQKGVTKQGQAVPELMDKGDANPASLNHVSQYGGL 355
Query: 267 ---------------MVPPSAGGS----YG-----------GPGGHGYPF-----SGPPP 291
M P S + YG P P+ S
Sbjct: 356 GHGPVNPALIAHQNTMNPTSLAATGLNQYGLSGAALPGLSREPAASSLPYNSLSSSSQTD 415
Query: 292 LGHHLNSSLGGPGQVPSSMGGVGAGGYGAG----LGGPYGGYG--GPGSTGYGGLGGAGG 345
LGH L G+ +S+G + G L G G G GS G G +G
Sbjct: 416 LGHQLFLQAAASGR--TSLGANSSTQLDLGRQLFLQGTASGRPSLGAGSYGISPYGSSGY 473
Query: 346 GAGAGGALGGAAGGLGGGSSLYRLPPSSAGMPSGGYPEAGHYGLSSTSAGYPSQHHQAAG 405
G+ + G+ GGAA S Y +P SS+ + Y A HY L+S + P G
Sbjct: 474 GSHSYGSFGGAA-------SQYGIPSSSSVAQTAAYDGASHYSLASHQSQLP-------G 519
Query: 406 TSPVPRVPPG 415
TSP V PG
Sbjct: 520 TSPSSGVLPG 529
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A D + R++++ + D L S FS YG++EE D+ TGKSKGY I ++ I+
Sbjct: 234 ATTDASLRRIYVGNVPDDMKPATLTSFFSNYGDIEEGPGGFDRNTGKSKGYSLILYRTIE 293
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAG 149
A AL++P K IDG LA G
Sbjct: 294 AANRALEDPVKSIDGHQLFCKLAAEG 319
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D+SLRK+FV + + + + + FA +GE+ + + DK +GK KG+ Y+ +GA
Sbjct: 64 DISLRKLFVRGLGYETTTESFKSVFAQHGEVIDAVVVVDKISGKNKGYGFVTYRHLDGAL 123
Query: 220 AALVDPIKTVDGKQLNCRLA 239
+AL +P K +DG+ + LA
Sbjct: 124 SALQEPSKEMDGRIVVSNLA 143
>gi|302804260|ref|XP_002983882.1| hypothetical protein SELMODRAFT_27842 [Selaginella moellendorffii]
gi|300148234|gb|EFJ14894.1| hypothetical protein SELMODRAFT_27842 [Selaginella moellendorffii]
Length = 146
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 102/160 (63%), Gaps = 16/160 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+RGL W+TT++ LR F YGE+EE VI DKATGKS+G+GFITFKH+D A ALKE
Sbjct: 1 KLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALKE 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
PSK ID S + D + RK+++G + + S + LL F+ YGEIE
Sbjct: 61 PSKTIDV---------------SESRSADQAQRKLYIGGLSYETSNETLLNIFSQYGEIE 105
Query: 192 EGPLGFDKQTGKP-KGFALFVYKTAEGAQAALVDPIKTVD 230
EG + +DK T K +GFA YK+ E A+ A+ DP KT++
Sbjct: 106 EGAVAYDKNTNKSRRGFAFITYKSVEAARKAIDDPNKTIE 145
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 55 DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKS-KG 113
DV ES RS AD QRKL+I GL ++T+ E L +IFS YGE+EE V DK T KS +G
Sbjct: 66 DVSES-RS---ADQAQRKLYIGGLSYETSNETLLNIFSQYGEIEEGAVAYDKNTNKSRRG 121
Query: 114 YGFITFKHIDGAMLALKEPSKKID 137
+ FIT+K ++ A A+ +P+K I+
Sbjct: 122 FAFITYKSVEAARKAIDDPNKTIE 145
>gi|224088210|ref|XP_002308372.1| predicted protein [Populus trichocarpa]
gi|222854348|gb|EEE91895.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 138/235 (58%), Gaps = 21/235 (8%)
Query: 1 MDSIKKRKIDENGAVLSDLESPNRLTPQD-ARKIVERLTSDQLLDVLSSAVARHDDVLES 59
M+ +KKRK+DE A+++ S LT QD R +++ L+ QL+D+LS D L S
Sbjct: 1 MEDLKKRKMDE--AIING--SAETLTTQDYLRSLLDPLSKPQLVDLLSRLCLCGDISLVS 56
Query: 60 V--RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFI 117
R ++D+ DT E F +GE+EE VI DKATGKS+GYGFI
Sbjct: 57 AIGRFVSDSSSV-------CCVIDTVHE-----FRMHGEIEEGSVIYDKATGKSRGYGFI 104
Query: 118 TFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSA 177
T+KH++ A AL PSK IDGR+ V NLA G +G +T D++ RK+++G + ++S+
Sbjct: 105 TYKHMESAQSALGAPSKLIDGRMAVCNLACEGLTGATTTP--DLTQRKLYIGGLSPEISS 162
Query: 178 DKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
+ LL F YGEIEEG + ++K T + +GF YKT E A+ A+ DP K + K
Sbjct: 163 EMLLHFFGRYGEIEEGSVAYNKDTNESRGFGFVTYKTVEAAKKAIDDPHKLLGDK 217
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D TQRKL+I GL + ++E L F YGE+EE V +K T +S+G+GF+T+K ++ A
Sbjct: 145 DLTQRKLYIGGLSPEISSEMLLHFFGRYGEIEEGSVAYNKDTNESRGFGFVTYKTVEAAK 204
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIF 167
A+ +P K + + V A G S P+++ L + F
Sbjct: 205 KAIDDPHKLLGDKFPVAVRAATGVS------PINIHLGRPF 239
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 167 FVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPI 226
FV + + + F +GEIEEG + +DK TGK +G+ YK E AQ+AL P
Sbjct: 61 FVSDSSSVCCVIDTVHEFRMHGEIEEGSVIYDKATGKSRGYGFITYKHMESAQSALGAPS 120
Query: 227 KTVDGKQLNCRLA 239
K +DG+ C LA
Sbjct: 121 KLIDGRMAVCNLA 133
>gi|298707500|emb|CBJ30102.1| Uncharacterized protein [Ectocarpus siliculosus]
Length = 470
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 144/275 (52%), Gaps = 25/275 (9%)
Query: 5 KKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIA 64
KKR++DE+G + E+ + ++ L ++QL+ +L + + + +
Sbjct: 97 KKRRLDEDGNASAFAENTAESRKEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRAC 156
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D P +K+F+RGL W+T + LR++F YGE+ EA V++DK T KSKGYGF+TFK +DG
Sbjct: 157 DDIPVNKKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKSMDG 216
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSG-------------------------NSTNNPV 159
A AL+ P K IDGRV++ NLA +S +
Sbjct: 217 AHAALENPEKMIDGRVSLCNLAALRSSQPLPARAGGGMQGGAMQGGAGGMMGGAVGGSGE 276
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
DVS RKIFV + D + + L F+ +GE+E+ + D+ +GK KG+ ++ A A
Sbjct: 277 DVSARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAA 336
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGP 254
AA+ +P K +DG+ +C +A + + GGP
Sbjct: 337 AAVAEPEKQLDGRLTHCNIAAEGASNRKNQNYGGP 371
>gi|255579005|ref|XP_002530354.1| conserved hypothetical protein [Ricinus communis]
gi|223530101|gb|EEF32015.1| conserved hypothetical protein [Ricinus communis]
Length = 534
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
L F +GE+EE VI DKATGKS+GYGFIT+KH++ +AL+ PSK IDGR+ V NLA
Sbjct: 282 LAQAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQIALRAPSKLIDGRLAVCNLA 341
Query: 147 VAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKG 206
G +G ST D++ RK+++G + +++++ LL F +GEIEEG + +DK T + +G
Sbjct: 342 CEGLTGASTTP--DLAQRKLYIGGLSPEITSEMLLNFFGRHGEIEEGSVAYDKDTNESRG 399
Query: 207 FALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
F YKT E A+ A+ DP K + G+ + +LAD K K
Sbjct: 400 FGFVTYKTVEAAKKAIDDPQKVLGGRSIIVKLADTHKGK 438
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D QRKL+I GL + T+E L + F +GE+EE V DK T +S+G+GF+T+K ++ A
Sbjct: 353 DLAQRKLYIGGLSPEITSEMLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 412
Query: 127 LALKEPSKKIDGRVTVTNLA 146
A+ +P K + GR + LA
Sbjct: 413 KAIDDPQKVLGGRSIIVKLA 432
>gi|357142788|ref|XP_003572694.1| PREDICTED: uncharacterized protein LOC100829612 [Brachypodium
distachyon]
Length = 356
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 9/214 (4%)
Query: 41 QLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEA 100
+LLD+L A R +L + + A +D T R+LF+ GLG + + L + F+ +G LEE+
Sbjct: 71 ELLDLLVEACLRDSALLSRLAASAASDATHRRLFVHGLGPGSNSAALAAAFAPFGVLEES 130
Query: 101 VVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVD 160
+ D+ATG+ +GYGF+TF+ A AL + SK++ R LA G++G
Sbjct: 131 HAVADRATGRCRGYGFVTFRRSSSARRALADASKRVGDRPVACQLASLGSAGPCPE---- 186
Query: 161 VSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQA 220
+RK+FV VP S D+L F +GEIE GPLG D TG+ +A+F+YK+ G +
Sbjct: 187 --MRKLFVDKVPAGASRDELRKFFCQFGEIEAGPLGADHATGRFHRYAIFLYKSPGGLRK 244
Query: 221 ALVDPIKTVDGKQLNCRLADNKK---AKPMGPDG 251
AL +P K DG +L+CR A +KK A+P+ DG
Sbjct: 245 ALEEPRKVFDGCELHCRPAHSKKRATAEPINADG 278
>gi|325185806|emb|CCA20310.1| hypothetical protein SELMODRAFT_151090 [Albugo laibachii Nc14]
gi|325191562|emb|CCA25854.1| hypothetical protein SELMODRAFT_163608 [Albugo laibachii Nc14]
Length = 276
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 132/262 (50%), Gaps = 40/262 (15%)
Query: 5 KKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSA--------------- 49
KKR+ID + + N + +++ + +QL +L SA
Sbjct: 8 KKRRIDASTCA----KQRNEGDSFNVYQLLSSFSREQLTAILMSAYVQNVSCEAFDLAAF 63
Query: 50 --VARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKA 107
A++D + +R++A+AD + RK+F+RGL W+T++E LR+ F +G++EE VI DK
Sbjct: 64 YFAAQYDTIYNEIRTVANADTSHRKVFVRGLAWNTSSETLRNAFGKFGDIEEGAVIFDKC 123
Query: 108 TGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVA--GNSGNSTNNP------- 158
+GKSKGYGF+TF ++ A A+ + +IDGR T+ NLA ++ +NP
Sbjct: 124 SGKSKGYGFVTFAEMEAAQFAVDQHIVEIDGRKTMCNLASMRPDSTQVFESNPSEALYPM 183
Query: 159 ----------VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFA 208
D S RK+FV + S + F YG+IE + D++TGK KGF
Sbjct: 184 DRREIMASSGFDDSDRKLFVRGLAWITSDETFRREFEKYGDIEGASIARDRKTGKSKGFG 243
Query: 209 LFVYKTAEGAQAALVDPIKTVD 230
Y++ A AL P K +D
Sbjct: 244 FVTYRSNASAHRALQQPQKIID 265
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D S RK+FV + + S++ L F +G+IEEG + FDK +GK KG+ + E AQ
Sbjct: 83 DTSHRKVFVRGLAWNTSSETLRNAFGKFGDIEEGAVIFDKCSGKSKGYGFVTFAEMEAAQ 142
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMGPDG 251
A+ I +DG++ C LA M PD
Sbjct: 143 FAVDQHIVEIDGRKTMCNLA------SMRPDS 168
>gi|147864061|emb|CAN83223.1| hypothetical protein VITISV_031367 [Vitis vinifera]
Length = 294
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 129/247 (52%), Gaps = 60/247 (24%)
Query: 1 MDSIKKRKIDE--NGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLE 58
M+ +KKRK++E NG + S +P++ + +++ L+ QL+D+LS +++ + E
Sbjct: 1 MEDLKKRKLEEASNGQISS--------SPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAE 52
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
++S+A ADP RKLF+RGL W+TT+E L +
Sbjct: 53 EIKSVASADPVHRKLFVRGLAWNTTSETLCA----------------------------- 83
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
GR+ V NLA G SG ST D + RK+++G + D++++
Sbjct: 84 -------------------GRMAVCNLACEGLSGASTTP--DQAQRKLYIGGLAPDVTSE 122
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
LL+ F +GEIEEG + +DK+T + +GF YKT E A+ A+ DP K + G+ + +L
Sbjct: 123 VLLSFFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKL 182
Query: 239 ADNKKAK 245
AD+ K K
Sbjct: 183 ADSHKGK 189
>gi|255642098|gb|ACU21315.1| unknown [Glycine max]
Length = 231
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 76/92 (82%), Gaps = 1/92 (1%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
DVSLRK+FVGNVP ++S+++LL F +GE+EEGPLGFDK +GK +GFA FVYKT EGA+
Sbjct: 14 DVSLRKVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGAR 73
Query: 220 AALVDPIKTVDGKQLNCRLA-DNKKAKPMGPD 250
A+LV+P+KT++G Q+ C+LA DNKK KP D
Sbjct: 74 ASLVEPLKTIEGHQVICKLAVDNKKTKPFVAD 105
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 55 DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+ + ++ + D + RK+F+ + ++ ++E L F +GE+EE + DK++GKS+G+
Sbjct: 2 EFTKKRKTEENGDVSLRKVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGF 61
Query: 115 GFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
F +K +GA +L EP K I+G + LAV
Sbjct: 62 AFFVYKTEEGARASLVEPLKTIEGHQVICKLAV 94
>gi|361070119|gb|AEW09371.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139841|gb|AFG51194.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139842|gb|AFG51195.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139843|gb|AFG51196.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139844|gb|AFG51197.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139845|gb|AFG51198.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139846|gb|AFG51199.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139847|gb|AFG51200.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139848|gb|AFG51201.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139849|gb|AFG51202.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139850|gb|AFG51203.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139851|gb|AFG51204.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139852|gb|AFG51205.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139853|gb|AFG51206.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139854|gb|AFG51207.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139855|gb|AFG51208.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139856|gb|AFG51209.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139857|gb|AFG51210.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
Length = 137
Score = 125 bits (313), Expect = 5e-26, Method: Composition-based stats.
Identities = 58/122 (47%), Positives = 86/122 (70%)
Query: 3 SIKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRS 62
+IK+ + +EN E+ +D +K++ + +QL+D++S + ++E++R
Sbjct: 16 AIKEDEENENSEADGSSEAEVEEDEEDLKKLLGPFSKEQLIDIISENAKKDPQLVENIRK 75
Query: 63 IADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHI 122
+AD DP RK+F+RGLGWDTT+E L+S+FS YGELEE VI+DK TGKSKGYGF+TFKH+
Sbjct: 76 LADKDPAHRKIFVRGLGWDTTSEALKSVFSQYGELEECTVIVDKGTGKSKGYGFVTFKHM 135
Query: 123 DG 124
DG
Sbjct: 136 DG 137
Score = 44.7 bits (104), Expect = 0.10, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEG 217
D + RKIFV + D +++ L + F+ YGE+EE + DK TGK KG+ +K +G
Sbjct: 80 DPAHRKIFVRGLGWDTTSEALKSVFSQYGELEECTVIVDKGTGKSKGYGFVTFKHMDG 137
>gi|383139840|gb|AFG51193.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
Length = 137
Score = 124 bits (312), Expect = 7e-26, Method: Composition-based stats.
Identities = 58/122 (47%), Positives = 86/122 (70%)
Query: 3 SIKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRS 62
+IK+ + +EN E+ +D +K++ + +QL+D++S + ++E++R
Sbjct: 16 AIKEDEENENSEADGSSEAEVEEDEEDLKKLLGPFSKEQLIDIISENAKKDPQLVENIRK 75
Query: 63 IADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHI 122
+AD DP RK+F+RGLGWDTT+E L+S+FS YGELEE VI+DK TGKSKGYGF+TFKH+
Sbjct: 76 LADKDPAHRKIFVRGLGWDTTSETLKSVFSQYGELEECTVIVDKGTGKSKGYGFVTFKHM 135
Query: 123 DG 124
DG
Sbjct: 136 DG 137
Score = 44.7 bits (104), Expect = 0.097, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEG 217
D + RKIFV + D +++ L + F+ YGE+EE + DK TGK KG+ +K +G
Sbjct: 80 DPAHRKIFVRGLGWDTTSETLKSVFSQYGELEECTVIVDKGTGKSKGYGFVTFKHMDG 137
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 100/175 (57%), Gaps = 10/175 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT +GLR FS +GE+ E +V+ D+AT +S+G+GFITF+ L +
Sbjct: 22 KMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEKVLAQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+ ++D + +A S +P +KIFVG + + +AD + HF+ YG++E
Sbjct: 82 AAHELDQKKIDPKVAFPKRS-----HPKVTRTKKIFVGGLSANTTADDIKNHFSQYGKVE 136
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E L FDKQT + +GF + + + +VD I + ++N ++ + KKA+P
Sbjct: 137 EAQLMFDKQTNRHRGFGFVTFDSED-----VVDKICEIHFHEVNSKMVECKKAQP 186
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT + +++ FS YG++EEA ++ DK T + +G+GF+TF D
Sbjct: 109 KKIFVGGLSANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSED 161
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 50/101 (49%)
Query: 146 AVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPK 205
A + + + T+N + K+F+G + + D L +F+ +GE+ E + D+ T + +
Sbjct: 3 AESQQTSSGTSNEIPNDPGKMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSR 62
Query: 206 GFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
GF ++ + L +D K+++ ++A K++ P
Sbjct: 63 GFGFITFRDPASVEKVLAQAAHELDQKKIDPKVAFPKRSHP 103
>gi|21595502|gb|AAM66107.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 343
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 23 NRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDT 82
N P++ R++++ + DQL+D++ SA + +V AD D T RK+F+ GL W+T
Sbjct: 56 NEFDPEELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWET 115
Query: 83 TTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTV 142
T E L +F YGE+EE V++DKATGK+KG+GF+ FK GA ALKEP K+I R
Sbjct: 116 TRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTAT 175
Query: 143 TNLA----VAGNSGNSTNNPVDVSL 163
LA A G+ PV +S+
Sbjct: 176 CQLASMGPAASGKGHDQPGPVKISM 200
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
DV+ RKIFV +P + + + L+ F YGEIEE + DK TGK KGF ++KT +GA+
Sbjct: 100 DVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAK 159
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGN 256
AL +P K + + C+LA MGP G G+
Sbjct: 160 EALKEPKKRILNRTATCQLAS------MGPAASGKGH 190
>gi|18399877|ref|NP_565525.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
gi|17380804|gb|AAL36089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20198218|gb|AAD25815.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|21436357|gb|AAM51348.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51970870|dbj|BAD44127.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330252168|gb|AEC07262.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
Length = 343
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 23 NRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDT 82
N P++ R++++ + DQL+D++ SA + +V AD D T RK+F+ GL W+T
Sbjct: 56 NEFDPEELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWET 115
Query: 83 TTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTV 142
T E L +F YGE+EE V++DKATGK+KG+GF+ FK GA ALKEP K+I R
Sbjct: 116 TRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTAT 175
Query: 143 TNLA----VAGNSGNSTNNPVDVSL 163
LA A G+ PV +S+
Sbjct: 176 CQLASMGPAASGKGHDQPGPVKISM 200
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
DV+ RKIFV +P + + + L+ F YGEIEE + DK TGK KGF ++KT +GA+
Sbjct: 100 DVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAK 159
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGN 256
AL +P K + + C+LA MGP G G+
Sbjct: 160 EALKEPKKRILNRTATCQLAS------MGPAASGKGH 190
>gi|30681615|ref|NP_850021.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
gi|330252167|gb|AEC07261.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
Length = 347
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 23 NRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDT 82
N P++ R++++ + DQL+D++ SA + +V AD D T RK+F+ GL W+T
Sbjct: 56 NEFDPEELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWET 115
Query: 83 TTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTV 142
T E L +F YGE+EE V++DKATGK+KG+GF+ FK GA ALKEP K+I R
Sbjct: 116 TRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTAT 175
Query: 143 TNLA----VAGNSGNSTNNPVDVSL 163
LA A G+ PV +S+
Sbjct: 176 CQLASMGPAASGKGHDQPGPVKISM 200
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
DV+ RKIFV +P + + + L+ F YGEIEE + DK TGK KGF ++KT +GA+
Sbjct: 100 DVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAK 159
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGN 256
AL +P K + + C+LA MGP G G+
Sbjct: 160 EALKEPKKRILNRTATCQLAS------MGPAASGKGH 190
>gi|77551814|gb|ABA94611.1| RNA recognition motif family protein [Oryza sativa Japonica Group]
Length = 415
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 109/191 (57%), Gaps = 4/191 (2%)
Query: 56 VLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYG 115
+L +R+ ADA P+ R+LF+ GL L + FS +G L E V+ +ATG KG+G
Sbjct: 73 LLARIRAAADASPSHRRLFVHGLPPHADAPALAAAFSRFGPLAECDVVARRATGACKGFG 132
Query: 116 FITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL-RKIFVGNVPND 174
F+TF+ A AL+E + G V V AV+ + + R+++V NV
Sbjct: 133 FVTFQSRAAARRALREVGR---GGVAVAGRAVSAQYATAGAAAAASAAGRRVYVTNVAPG 189
Query: 175 MSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL 234
SA++L A FA +GE+E GP GFD TG +G ALFVY+ AE A+ AL +P + +G+ L
Sbjct: 190 ASAERLRAFFAGFGELEGGPFGFDADTGSSRGCALFVYRAAEDARRALEEPYRVFEGRTL 249
Query: 235 NCRLADNKKAK 245
+C+LA + K
Sbjct: 250 HCQLAADPARK 260
>gi|19574236|emb|CAD28134.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
Length = 344
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 23 NRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDT 82
N P++ R++++ + DQL+D++ SA + +V AD D T RK+F+ GL W+T
Sbjct: 57 NEFDPEELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWET 116
Query: 83 TTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTV 142
T E L +F YGE+EE V++DKATGK+KG+GF+ FK GA ALKEP K+I R
Sbjct: 117 TRETLVGVFEGYGEIEECTVLIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTAT 176
Query: 143 TNLA----VAGNSGNSTNNPVDVSL 163
LA A G+ PV +S+
Sbjct: 177 CQLASMGPAASGKGHDQPGPVKISM 201
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
DV+ RKIFV +P + + + L+ F YGEIEE + DK TGK KGF ++KT +GA+
Sbjct: 101 DVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVLIDKATGKAKGFGFVMFKTRKGAK 160
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGN 256
AL +P K + + C+LA MGP G G+
Sbjct: 161 EALKEPKKRILNRTATCQLAS------MGPAASGKGH 191
>gi|297825067|ref|XP_002880416.1| hypothetical protein ARALYDRAFT_481072 [Arabidopsis lyrata subsp.
lyrata]
gi|297326255|gb|EFH56675.1| hypothetical protein ARALYDRAFT_481072 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
P++ R+++ + DQL+D++ SA + +V AD D T RK+F+ GL W+TT
Sbjct: 52 FDPEELRELLRPYSKDQLVDLVCSAAQIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTR 111
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTN 144
E L +F YGE+EE V++DKATGK+KG+GF+ FK GA ALKEP K+I R
Sbjct: 112 ETLVDVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQ 171
Query: 145 LA----VAGNSGNSTNNPVDVSL 163
LA A G+ PV +S+
Sbjct: 172 LASMGPAASGKGHDQAGPVKISM 194
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
DV+ RKIFV +P + + + L+ F YGEIEE + DK TGK KGF ++KT +GA+
Sbjct: 94 DVTHRKIFVYGLPWETTRETLVDVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAK 153
Query: 220 AALVDPIKTVDGKQLNCRLADN-KKAKPMGPDGGGPGNVSM 259
AL +P K + + C+LA A G D GP +SM
Sbjct: 154 EALKEPKKRILNRTATCQLASMGPAASGKGHDQAGPVKISM 194
>gi|125534915|gb|EAY81463.1| hypothetical protein OsI_36635 [Oryza sativa Indica Group]
Length = 269
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 4/185 (2%)
Query: 56 VLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYG 115
+L +R+ ADA P+ R+LF+ GL L + FS +G L E V+ +ATG KG+G
Sbjct: 73 LLARIRAAADASPSHRRLFVHGLPPHADAPALAAAFSRFGPLAECDVVARRATGACKGFG 132
Query: 116 FITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL-RKIFVGNVPND 174
F+TF+ A AL+E + G V V AV+ + + R+++V NV
Sbjct: 133 FVTFQSRAAARRALREVGR---GGVAVAGRAVSAQYATAGAAAAASAAGRRVYVTNVAPG 189
Query: 175 MSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL 234
SA++L A FA +GE+E GP GFD TG +G ALFVY+ AE A+ AL +P + +G+ L
Sbjct: 190 ASAERLRAFFAGFGELEGGPFGFDADTGSSRGCALFVYRAAEDARRALEEPYRVFEGRTL 249
Query: 235 NCRLA 239
+C+LA
Sbjct: 250 HCQLA 254
>gi|356576454|ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
Length = 476
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLFI G+ WDTT + L+ F YG++ V+ +K TGK +G+GF+ F
Sbjct: 2 DSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPN 173
KH IDG + K+ + D +++VT+ NSG ++ N ++ +KIFVG +P
Sbjct: 62 RVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSENGGNIRTKKIFVGGLPP 121
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ +K +F YG + + + +D+ TG+P+GF + T E L ++GKQ
Sbjct: 122 TLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLHKSFHDLNGKQ 181
Query: 234 LNCRLADNKKAKP 246
+ + A K A P
Sbjct: 182 VEVKRALPKDANP 194
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+D K+F+G + D + DKL HF YG++ + +K TGKP+GF V+
Sbjct: 1 MDSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNIL 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKPMG-PDGGGPGNVSMNHGDG 264
L D +DG+ ++ + A +++ + + GG N MN +G
Sbjct: 61 DRVLEDK-HVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSENG 106
>gi|168061455|ref|XP_001782704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665797|gb|EDQ52469.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 84
Score = 120 bits (302), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/83 (66%), Positives = 65/83 (78%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP RKLF+RGL W+T++ LR F YGE+EEA VI DK TGKS+G+GF+TFKH+D A
Sbjct: 2 DPVHRKLFVRGLAWETSSVALREAFEQYGEVEEACVITDKGTGKSRGFGFVTFKHMDSAQ 61
Query: 127 LALKEPSKKIDGRVTVTNLAVAG 149
ALKEPSK IDGR+TV NLA AG
Sbjct: 62 RALKEPSKNIDGRITVCNLASAG 84
Score = 57.8 bits (138), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 164 RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALV 223
RK+FV + + S+ L F YGE+EE + DK TGK +GF +K + AQ AL
Sbjct: 6 RKLFVRGLAWETSSVALREAFEQYGEVEEACVITDKGTGKSRGFGFVTFKHMDSAQRALK 65
Query: 224 DPIKTVDGKQLNCRLA 239
+P K +DG+ C LA
Sbjct: 66 EPSKNIDGRITVCNLA 81
>gi|356535448|ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLFI G+ WDTT + L+ F YG++ V+ +K TGK +G+GF+ F
Sbjct: 2 DSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPN 173
KH IDG + K+ + D +++VT+ NSG ++ N ++ +KIFVG +P
Sbjct: 62 RVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSGNGGNIRTKKIFVGGLPP 121
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ +K +F YG + + + +D+ TG+P+GF + T + L ++GKQ
Sbjct: 122 TLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGKQ 181
Query: 234 LNCRLADNKKAKP 246
+ + A K A P
Sbjct: 182 VEVKRALPKDANP 194
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+D K+F+G + D + DKL HF YG++ + +K TGKP+GF V+
Sbjct: 1 MDSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNIL 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKPMG-PDGGGPGNVSMNHGDG 264
L D +DG+ ++ + A +++ + + GG N MN G+G
Sbjct: 61 DRVLEDK-HVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSGNG 106
>gi|297825069|ref|XP_002880417.1| hypothetical protein ARALYDRAFT_481073 [Arabidopsis lyrata subsp.
lyrata]
gi|297326256|gb|EFH56676.1| hypothetical protein ARALYDRAFT_481073 [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 9 IDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADP 68
+ N SD E +D + ++E + ++L++++ + ++ +V AD D
Sbjct: 103 VTTNNESDSDFE----FDKEDVKHLLESYSKEELINLIYKTAEKGSKLISAVFESADRDS 158
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
+QR +F+RGLGWDTT E L++ F +GE+EE V++DK TG++KG+GF+ FK GA A
Sbjct: 159 SQRNIFVRGLGWDTTHENLKAAFEVFGEIEECSVVMDKDTGRAKGFGFVLFKTCKGARAA 218
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVD 160
L+ P K++ R + +LA +G PV+
Sbjct: 219 LRNPEKRMYNRTVICSLAKPSTAGKPREQPVE 250
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D S R IFV + D + + L A F +GEIEE + DK TG+ KGF ++KT +GA+
Sbjct: 157 DSSQRNIFVRGLGWDTTHENLKAAFEVFGEIEECSVVMDKDTGRAKGFGFVLFKTCKGAR 216
Query: 220 AALVDPIKTVDGKQLNCRLADNKKA-KPM-GPDGGGPGNVSM--NHGDGMGMVPPSAGGS 275
AAL +P K + + + C LA A KP P ++S NH + MV P +
Sbjct: 217 AALRNPEKRMYNRTVICSLAKPSTAGKPREQPVESVKIDLSRTANHSE---MVLPGIDLA 273
Query: 276 YGGPGGHGYPFSGPPPLGHHL 296
YG GH + P +G ++
Sbjct: 274 YGLDKGHQQQQNMPMYVGQNM 294
>gi|209875595|ref|XP_002139240.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209554846|gb|EEA04891.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 551
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 22/226 (9%)
Query: 14 AVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKL 73
A+LS E P L + R+++ L+ DQL+++L+ A + L++V S+ + R+L
Sbjct: 42 ALLSGFEYPQEL--ESLRRVLTPLSKDQLIELLAGACVDNQATLQNVLSVIYESRSHRRL 99
Query: 74 FIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPS 133
+++ L + TE + +FS +G++EE +V+ K GKS+GY F+T+K I+ A LA KE S
Sbjct: 100 YVKNLPFSVCTESVIKLFSQFGDVEEGIVL--KRNGKSRGYAFVTYKTIESAQLACKE-S 156
Query: 134 KKIDGRVTVTNLAVAGNSGNSTNNPV-------DVSLRKIFVGNVPNDMSADKLLAHFAC 186
++GRV + LA +P D RK+FV N+ + D L A F
Sbjct: 157 ITVNGRVLMVKLAA---------DPFPFEARRSDALRRKLFVRNLGFTTTEDSLSAVFGK 207
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
YGE+EE + + G+ +G+ + E AL P VDG+
Sbjct: 208 YGELEESVI-LRTREGESRGYGFVTFVNTESTMKALQQPHHLVDGR 252
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+D +RKLF+R LG+ TT + L ++F YGELEE+V IL G+S+GYGF+TF + +
Sbjct: 180 SDALRRKLFVRNLGFTTTEDSLSAVFGKYGELEESV-ILRTREGESRGYGFVTFVNTEST 238
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTN 156
M AL++P +DGR+ + A+ G +S N
Sbjct: 239 MKALQQPHHLVDGRLVFVHQAIEGRIRSSRN 269
>gi|198420439|ref|XP_002131647.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 442
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
QRKLFI GL +DTT E L + F+ +GE+ ++VV++D T KS+G+GF+TFK I +
Sbjct: 20 QRKLFIGGLSFDTTNESLSAYFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVM 79
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E K+DGR AV S + P +++KIFVG + +D + L HF +G
Sbjct: 80 SERPHKLDGRTVTPKRAV---SREDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFG 136
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA------DNK 242
+E + D++T K +GFA + + + T++G R A D
Sbjct: 137 IVELVEVMEDRETRKKRGFAFVTFADHDPVDKIVSQKYHTINGHNCEVRKALPKNELDKH 196
Query: 243 KAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGG--SYGGPGGHGY 284
K KP P + D PP A G YG PG Y
Sbjct: 197 KNKPGDRGPPPPEYMRDRERDYRRSPPPPAYGHDRYGPPGYDRY 240
>gi|242069255|ref|XP_002449904.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
gi|241935747|gb|EES08892.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
Length = 450
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 9/184 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT + L F YGE+EEA+V+ D+ATG+S+G+GFI F A + E
Sbjct: 7 KLFIGGISWDTNEDHLLKYFKKYGEVEEAIVMRDRATGRSRGFGFIMFADPAVAKHVIME 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS--------LRKIFVGNVPNDMSADKLLAH 183
IDGR+ A+A + +S NN + +KIFVG + ++++ + ++ H
Sbjct: 67 K-HMIDGRMVEAKKAIARDDHHSLNNIHGSAHGLQRPKHRKKIFVGGLASNVTKEDVIKH 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + + AL+ + + GK + + A K+
Sbjct: 126 FKQFGTIIDVVVVYDHHTQRPRGFGFITYDSEDAVHRALIKTFQKLKGKMVEVKRAIRKE 185
Query: 244 AKPM 247
P+
Sbjct: 186 PSPI 189
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 33 IVERLTSDQLLDVLSSAVARHDD-VLESVRSIAD--ADPTQRK-LFIRGLGWDTTTEGLR 88
I+E+ D + A+AR D L ++ A P RK +F+ GL + T E +
Sbjct: 64 IMEKHMIDGRMVEAKKAIARDDHHSLNNIHGSAHGLQRPKHRKKIFVGGLASNVTKEDVI 123
Query: 89 SIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
F +G + + VV+ D T + +G+GFIT+ D AL + +K+ G++ A+
Sbjct: 124 KHFKQFGTIIDVVVVYDHHTQRPRGFGFITYDSEDAVHRALIKTFQKLKGKMVEVKRAI 182
>gi|18399023|ref|NP_565450.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|20197017|gb|AAC16468.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|330251780|gb|AEC06874.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 613
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 8/154 (5%)
Query: 17 SDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIR 76
SD E +D ++++ + ++L++++ + ++ ++ AD D QR +F+R
Sbjct: 358 SDFEHD----KEDIKQLLVAYSKEELVNLIYKTAEKGSRLISAILESADRDIAQRNIFVR 413
Query: 77 GLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
G GWDTT E L++ F +YGE+EE V++DK TG+ KGYGF+ FK GA ALK P K++
Sbjct: 414 GFGWDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAREALKRPEKRM 473
Query: 137 DGRVTVTNLAVA--GNSGNSTN--NPVDVSLRKI 166
R+ V NLA G +G + PV++ L K+
Sbjct: 474 YNRIVVCNLASEKPGKAGKEQDMAEPVNIDLTKM 507
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D++ R IFV D + + L F YGEIEE + DK TG+ KG+ ++KT +GA+
Sbjct: 404 DIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAR 463
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKP-MGPDGGGPGNVSM 259
AL P K + + + C LA K K D P N+ +
Sbjct: 464 EALKRPEKRMYNRIVVCNLASEKPGKAGKEQDMAEPVNIDL 504
>gi|297599561|ref|NP_001047359.2| Os02g0602600 [Oryza sativa Japonica Group]
gi|255671069|dbj|BAF09273.2| Os02g0602600 [Oryza sativa Japonica Group]
Length = 415
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 116/227 (51%), Gaps = 16/227 (7%)
Query: 37 LTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGE 96
T ++LLD+L A R+ + + + A++D R+LF+ GL T + + F+ +G
Sbjct: 70 FTRNELLDLLVEACLRNPALRSRLAATAESDAAHRRLFVHGLSPGVTAAAMAAAFAPFGA 129
Query: 97 LEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKK---IDGRVTVTNLAVAGNSGN 153
L+E + D+ATG+ +GYGF+TF+ A AL + + GR LA G +
Sbjct: 130 LDECHAVADRATGRCRGYGFVTFRRRSAARRALAADASSRLAVGGRPVACQLASLGPTSP 189
Query: 154 STNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYK 213
RK+FV NVP + D+L F+ +GEIE GPLG D+ TG+ +G+A+F YK
Sbjct: 190 D---------RKLFVDNVPARAAHDELRRLFSRFGEIEAGPLGADRATGQFRGYAIFFYK 240
Query: 214 TAEGAQAALVDPIKTVDGKQLNCRLA----DNKKAKPMGPDGGGPGN 256
EG AL + DG +L+CR A K M D G N
Sbjct: 241 YPEGLTKALEERKVVFDGCELHCRRAHRVNKEKHLMTMPADAGAQSN 287
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E LR FS YGE+ EAV++ D+ TG+++G+GF+ F A + +KE
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAIAEIVIKE 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR+ AV + NSG+ +P RKIFVG + + ++ +
Sbjct: 67 K-HNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L+ ++GK + + A K+
Sbjct: 126 FDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 33 IVERLTSDQLLDVLSSAVARHD-DVLESVRSIADADP---TQRKLFIRGLGWDTTTEGLR 88
I E+ D + AV R D ++L P RK+F+ GL T +
Sbjct: 64 IKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFK 123
Query: 89 SIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
F +G + + VV+ D T + +G+GFIT+ + L + +++G++ AV
Sbjct: 124 KYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAV 182
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641086|gb|AEE74607.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ FS++GE+ EAV++ D+ TG+++G+GF+ F A + + E
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL----------RKIFVGNVPNDMSADKLL 181
IDGR+ AV + N N S+ RKIFVG +P+ ++
Sbjct: 67 -KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFK 125
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + + +D T +P+GF Y + E + L+ ++GK + + A
Sbjct: 126 TYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVP 185
Query: 242 KKAKP 246
K+ P
Sbjct: 186 KELSP 190
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 33 IVERLTSDQLLDVLSSAVARHDD--VLESVRSIADADP----TQRKLFIRGLGWDTTTEG 86
I E+ D L AV R D V S S P RK+F+ GL T
Sbjct: 64 ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
++ F +G + VV+ D T + +G+GFIT+ + L + +++G++ A
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183
Query: 147 V 147
V
Sbjct: 184 V 184
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP KLF+ GL W T++E LR F +G + + +++ D T +S+G+GFITF
Sbjct: 37 DPAPGKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVD 96
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
LK P +DG+ A N N +KIFVG V D SAD++ A+F+
Sbjct: 97 NVLKVPIHTLDGKKIDPKHATPKNRPKQPN-----KTKKIFVGGVSQDTSADEVKAYFSQ 151
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 152 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA-- 209
Query: 247 MGPDGGGPGNVSMNHGDGMGMVPPSAGG 274
+ G M G GM M P+AG
Sbjct: 210 VQASAQLLGKRLMLSGLGMRMATPTAGA 237
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 156 NNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTA 215
NN D + K+FVG + S++KL +F +G + + + D T + +GF +
Sbjct: 33 NNSNDPAPGKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEP 92
Query: 216 EGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
L PI T+DGK+++ + A K +P P+
Sbjct: 93 SSVDNVLKVPIHTLDGKKIDPKHA-TPKNRPKQPN 126
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930693|gb|AAL32012.1|AF436830_1 AT3g07810/F17A17_15 [Arabidopsis thaliana]
gi|23297627|gb|AAN12995.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332641085|gb|AEE74606.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 494
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ FS++GE+ EAV++ D+ TG+++G+GF+ F A + + E
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL----------RKIFVGNVPNDMSADKLL 181
IDGR+ AV + N N S+ RKIFVG +P+ ++
Sbjct: 67 -KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFK 125
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + + +D T +P+GF Y + E + L+ ++GK + + A
Sbjct: 126 TYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVP 185
Query: 242 KKAKP 246
K+ P
Sbjct: 186 KELSP 190
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 33 IVERLTSDQLLDVLSSAVARHDD--VLESVRSIADADP----TQRKLFIRGLGWDTTTEG 86
I E+ D L AV R D V S S P RK+F+ GL T
Sbjct: 64 ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
++ F +G + VV+ D T + +G+GFIT+ + L + +++G++ A
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183
Query: 147 V 147
V
Sbjct: 184 V 184
>gi|242071607|ref|XP_002451080.1| hypothetical protein SORBIDRAFT_05g023870 [Sorghum bicolor]
gi|241936923|gb|EES10068.1| hypothetical protein SORBIDRAFT_05g023870 [Sorghum bicolor]
Length = 431
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 10/223 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
R++++ + +L+ +L+ A + + + + A A P+ R+LF+ GL + L
Sbjct: 64 RRLIDPYSKPRLIAILAEAATANPALRARLGAAAAASPSHRQLFVHGLPPHADSAALAEA 123
Query: 91 FSAYGELEEAVVILD-KATGKS-KGYGFITFKHIDGAMLALKE-PSKKIDGRVTVTNLAV 147
FS +G L + I D +A+G+ KGYGF++F A A++E P + GR A
Sbjct: 124 FSRFGPLADCHAIADHRASGRCCKGYGFVSFASRAAARHAVREAPRVTVAGRPVSVQFAS 183
Query: 148 AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPK-- 205
AG S + R+++V NV D SA++L A FA +GE+E GP GFD TG +
Sbjct: 184 AG-PDPSGGGGAGAAGRRVYVTNVAPDASAERLRAFFARFGELEGGPFGFDGDTGYARFG 242
Query: 206 ----GFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
G+ALFVY+ A GA A+ +P + +G+ L+C+LA+ A
Sbjct: 243 ELEGGYALFVYQAAAGAAKAVQEPYRVFEGRTLHCQLANEPAA 285
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ FS++GE+ EAV++ D+ TG+++G+GF+ F A + + E
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL----------RKIFVGNVPNDMSADKLL 181
IDGR+ AV + N N S+ RKIFVG +P+ ++
Sbjct: 67 -KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPSGPGRTRKIFVGGLPSSVTESDFK 125
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + + +D T +P+GF Y + E + L+ ++GK + + A
Sbjct: 126 TYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVP 185
Query: 242 KKAKP 246
K+ P
Sbjct: 186 KELSP 190
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 33 IVERLTSDQLLDVLSSAVARHDD--VLESVRSIADADPT----QRKLFIRGLGWDTTTEG 86
I E+ D L AV R D V S S P+ RK+F+ GL T
Sbjct: 64 ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPSGPGRTRKIFVGGLPSSVTESD 123
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
++ F +G + VV+ D T + +G+GFIT+ + L + +++G++ A
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183
Query: 147 V 147
V
Sbjct: 184 V 184
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis thaliana]
Length = 492
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ FS++GE+ EAV++ D+ TG+++G+GF+ F A + + E
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL----------RKIFVGNVPNDMSADKLL 181
IDGR+ AV + N N S+ RKIFVG +P+ ++
Sbjct: 67 -KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFK 125
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + + +D T +P+GF Y + E + L+ ++GK + + A
Sbjct: 126 TYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVP 185
Query: 242 KKAKP 246
K+ P
Sbjct: 186 KELSP 190
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 33 IVERLTSDQLLDVLSSAVARHDD--VLESVRSIADADP----TQRKLFIRGLGWDTTTEG 86
I E+ D L AV R D V S S P RK+F+ GL T
Sbjct: 64 ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
++ F +G + VV+ D T + +G+GFIT+ + L + +++G++ A
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183
Query: 147 V 147
V
Sbjct: 184 V 184
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP KLF+ GL W T++E LR F +G + + +++ D T +S+G+GFITF
Sbjct: 52 DPAPGKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVD 111
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
LK P +DG+ A N N +KIFVG V D SAD++ A+F+
Sbjct: 112 NVLKVPIHTLDGKKIDPKHATPKNRPKQPN-----KTKKIFVGGVSQDTSADEVKAYFSQ 166
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 167 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA-- 224
Query: 247 MGPDGGGPGNVSMNHGDGMGMVPPSAGG 274
+ G M G GM M P+AG
Sbjct: 225 VQASAQLLGKRLMLSGLGMRMATPTAGA 252
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 156 NNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTA 215
NN D + K+FVG + S++KL +F +G + + + D T + +GF +
Sbjct: 48 NNSNDPAPGKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEP 107
Query: 216 EGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
L PI T+DGK+++ + A K +P P+
Sbjct: 108 SSVDNVLKVPIHTLDGKKIDPKHA-TPKNRPKQPN 141
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 117/236 (49%), Gaps = 28/236 (11%)
Query: 52 RHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKS 111
R + +++R IA + K+FI GL W+TT E LR FS +GE+ E V+ D TG+S
Sbjct: 164 RWSNQEQTLRPIATSLVEFSKMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRS 223
Query: 112 KGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
+G+GF+TFK + + + +DG++ A+ + T+ KIFVG V
Sbjct: 224 RGFGFLTFKDPKTVNIVMVK-EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGV 274
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
+ + + FA +G + + L DK TG+P+GF +++ G +A L +
Sbjct: 275 SQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLARDL----- 329
Query: 232 KQLNCRLADNKKAKPMG---------PDGGGPGNVSMNHGDGM----GMVPPSAGG 274
+++ +L + KKA+P G GGPGN G+G G P+AGG
Sbjct: 330 -EIHGKLIEVKKAQPRGNLREEEEANRRNGGPGNKFRKQGEGQADASGAGNPAAGG 384
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
gi|297328392|gb|EFH58811.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ FS++GE+ EAV++ D+ TG+++G+GF+ F A + + E
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL----------RKIFVGNVPNDMSADKLL 181
IDGR+ AV + N N S+ RKIFVG +P+ ++
Sbjct: 67 -KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFK 125
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + + +D T +P+GF Y + E + L+ ++GK + + A
Sbjct: 126 TYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVP 185
Query: 242 KKAKP 246
K+ P
Sbjct: 186 KELSP 190
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 33 IVERLTSDQLLDVLSSAVARHDD--VLESVRSIADADP----TQRKLFIRGLGWDTTTEG 86
I E+ D L AV R D V S S P RK+F+ GL T
Sbjct: 64 ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
++ F +G + VV+ D T + +G+GFIT+ + L + +++G++ A
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183
Query: 147 V 147
V
Sbjct: 184 V 184
>gi|225433229|ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 19/195 (9%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLFI G+ W+T+ + L+ F +YGE+ +AVV+ DKATG+ +G+GF+ F
Sbjct: 2 DSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVTVT--NLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
KH IDG + K + + + + N A NSG N V +KIFVG +
Sbjct: 62 RVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGN----VKTKKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P +S + +F +G + + + +D+ T +P+GF + T + L ++G
Sbjct: 118 PPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNG 177
Query: 232 KQLNCRLADNKKAKP 246
KQ+ + A K A P
Sbjct: 178 KQVEVKRALPKDANP 192
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+D K+F+G + + S DKL +F YGE+ + + DK TG+P+GF V+ A
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVF-----A 55
Query: 219 QAALVDPI----KTVDGKQLNCRLADNKKAK 245
+++D + +DG+ + + A +++ +
Sbjct: 56 DPSILDRVLQEKHIIDGRTVEAKRALSREEQ 86
>gi|147791134|emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 19/195 (9%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLFI G+ W+T+ + L+ F +YGE+ +AVV+ DKATG+ +G+GF+ F
Sbjct: 2 DSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVTVT--NLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
KH IDG + K + + + + N A NSG N V +KIFVG +
Sbjct: 62 RVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGN----VKTKKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P +S + +F +G + + + +D+ T +P+GF + T + L ++G
Sbjct: 118 PPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNG 177
Query: 232 KQLNCRLADNKKAKP 246
KQ+ + A K A P
Sbjct: 178 KQVEVKRALPKDANP 192
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+D K+F+G + + S DKL +F YGE+ + + DK TG+P+GF V+ A
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVF-----A 55
Query: 219 QAALVDPI----KTVDGKQLNCRLADNKKAK 245
+++D + +DG+ + + A +++ +
Sbjct: 56 DPSILDRVLQEKHIIDGRTVEAKRALSREEQ 86
>gi|66357960|ref|XP_626158.1| T8M16_190-plant like protein with RRM domain [Cryptosporidium
parvum Iowa II]
gi|46227101|gb|EAK88051.1| T8M16_190-plant like protein with RRM domain [Cryptosporidium
parvum Iowa II]
Length = 600
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 23/270 (8%)
Query: 19 LESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGL 78
LE P+ +D R+++ L+ DQL+++L+ A +L+ V ++ + R+L+I+ L
Sbjct: 47 LEVPHE--KEDFRRVLTPLSKDQLVELLAGACIEDQKILQRVFAVICESRSHRRLYIKNL 104
Query: 79 GWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDG 138
+ TE + +FS +G++EE +V+ K GKS+GY F+TFK I+ A+LA K P + G
Sbjct: 105 PFSANTESVIEVFSQFGDVEEGIVL--KKDGKSRGYAFVTFKTIESALLACKNPV-SMSG 161
Query: 139 RVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFD 198
R + LA + + D RK+FV N+ + + D L YGE+EE +
Sbjct: 162 RFLMVKLAADPFPFETKRS--DAIRRKLFVRNLGFETNEDSLSEVMGQYGELEESVI-LR 218
Query: 199 KQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL--------NCRLADNKKAKPMGPD 250
++G+ KG+ + ++E AL P +DG+ + R+ NK+
Sbjct: 219 TKSGESKGYGFVTFASSEATIKALQQPHHLIDGRLVFVHQAIEGKTRVTKNKEVYLQNNS 278
Query: 251 GGGPGNVSMNHGDGMGM-------VPPSAG 273
N M D + M VPPS+
Sbjct: 279 KQTYENKVMESKDQLPMPCNFDQVVPPSSS 308
>gi|67615331|ref|XP_667430.1| RNA-binding protein [Cryptosporidium hominis TU502]
gi|54658566|gb|EAL37200.1| RNA-binding protein [Cryptosporidium hominis]
Length = 599
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 23/270 (8%)
Query: 19 LESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGL 78
LE P+ +D R+++ L+ DQL+++L+ A +L+ V ++ + R+L+I+ L
Sbjct: 47 LEVPHE--KEDFRRVLTPLSKDQLVELLAGACIEDQKILQRVFAVICESRSHRRLYIKNL 104
Query: 79 GWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDG 138
+ TE + +FS +G++EE +V+ K GKS+GY F+TFK I+ A+LA K P + G
Sbjct: 105 PFSANTESVIEVFSQFGDVEEGIVL--KKDGKSRGYAFVTFKTIESALLACKNPV-SMSG 161
Query: 139 RVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFD 198
R + LA + + D RK+FV N+ + + D L YGE+EE +
Sbjct: 162 RFLMVKLAADPFPFETKRS--DAIRRKLFVRNLGFETNEDSLSEVMGQYGELEESVI-LR 218
Query: 199 KQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL--------NCRLADNKKAKPMGPD 250
++G+ KG+ + ++E AL P +DG+ + R+ NK+
Sbjct: 219 TKSGESKGYGFVTFASSEATIKALQQPHHLIDGRLVFVHQAIEGKTRMTKNKEVYLQNSS 278
Query: 251 GGGPGNVSMNHGDGM-------GMVPPSAG 273
N M D + +VPPS+
Sbjct: 279 KQTYENKVMESKDQLPLPCNFDQVVPPSSS 308
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E LR F YGE+ EAV++ D+ TG+++G+GF+ F A + +KE
Sbjct: 7 KLFIGGISWDTNEERLREYFCTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAEIVIKE 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR+ AV + NSG+ +P RKIFVG + + ++ +
Sbjct: 67 K-HNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L+ ++GK + + A K+
Sbjct: 126 FDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 33 IVERLTSDQLLDVLSSAVARHD-DVLESVRSIADADP---TQRKLFIRGLGWDTTTEGLR 88
I E+ D + AV R D ++L P RK+F+ GL T +
Sbjct: 64 IKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFK 123
Query: 89 SIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
F +G + + VV+ D T + +G+GFIT+ + L + +++G++ AV
Sbjct: 124 KYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAV 182
>gi|297836326|ref|XP_002886045.1| hypothetical protein ARALYDRAFT_480534 [Arabidopsis lyrata subsp.
lyrata]
gi|297331885|gb|EFH62304.1| hypothetical protein ARALYDRAFT_480534 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 28 QDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGL 87
+D ++++ + ++L++++ + ++ ++ AD D QR +F+RG GWDTT E L
Sbjct: 355 EDIKQLLVSYSKEELVNLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTHENL 414
Query: 88 RSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
++ F YGE+E+ V++DK TG+ KGYGF+ FK GA ALK P K++ R+ V NLA
Sbjct: 415 KAAFETYGEIEDCSVVMDKDTGRGKGYGFVQFKTRKGAREALKRPEKRMYNRIVVCNLAS 474
Query: 148 AGNSG----NSTNNPVDVSLRKI 166
SG PV + L ++
Sbjct: 475 KKPSGAGKEQDMAEPVKIDLTQM 497
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 91/231 (39%), Gaps = 36/231 (15%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D++ R IFV D + + L A F YGEIE+ + DK TG+ KG+ +KT +GA+
Sbjct: 394 DIAQRNIFVRGFGWDTTHENLKAAFETYGEIEDCSVVMDKDTGRGKGYGFVQFKTRKGAR 453
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMG----PDGGGPGNVSMNHGDGMGMVPPSAGGS 275
AL P K + + + C LA KP G D P + + M S
Sbjct: 454 EALKRPEKRMYNRIVVCNLA---SKKPSGAGKEQDMAEPVKIDLTQ-----MANQSEAVL 505
Query: 276 YGGPGGHGYPFSGPPPLGHHLNSSLGGPGQVPSSMGGVGAGGYGAGLGGPYGGYGGPGST 335
G GHG+ HH ++ M G YG P
Sbjct: 506 PGPELGHGHVLKKM----HHQQQTI--------DMFGQNIPFYGHSHQFP---------- 543
Query: 336 GYGGLGGAGGGAGAGGALGGAAGGLGGGSSLYRLPPSSAGMPSGGYPEAGH 386
G+ + GA G G G +G + S+ + PP+ GM + + GH
Sbjct: 544 GFDPMYGALSGLANYGMFG--SGMMMNQGSMLQPPPNHLGMAGQYFGDGGH 592
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 23/196 (11%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
TQ K+FI GL W+TT + LR FS +GE+ E V+ D ATG+S+G+GF+TFK +
Sbjct: 39 TQGKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTVNIV 98
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+ + +DG++ A+ + T+ KIFVG V + + + +FA +G
Sbjct: 99 MVK-EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKEYFAQFG 149
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF +++ G +A L ++ + GK + KKA+P G
Sbjct: 150 RVVDATLMMDKDTGRPRGFGFLTFESEAGVEACLSTELE-IHGKAIEV-----KKAQPRG 203
Query: 249 --------PDGGGPGN 256
GGPGN
Sbjct: 204 NLRDDDDASRRGGPGN 219
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ +TT + + F+ +G + +A +++DK TG+ +G+
Sbjct: 109 IIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGF 168
Query: 115 GFITFKHIDGAMLAL 129
GF+TF+ G L
Sbjct: 169 GFLTFESEAGVEACL 183
>gi|291402431|ref|XP_002717571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L HF YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ G+ WDT + L+ F+AYG++ EAV++ D+ TG+ +G+GFI F A ++E
Sbjct: 7 KLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIRE 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGN---STNNPVDVS-----LRKIFVGNVPNDMSADKLLAH 183
IDGR+ AV N N T+ ++VS RKIFVG + + ++ + +
Sbjct: 67 K-HNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTESEFKNY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E + L+ ++GK + + A K+
Sbjct: 126 FDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHD-DVLESVRSIADADP---TQRKLFIRGLGWDTTTEG 86
R I E+ D + AV R+D +++ + P RK+F+ GL T
Sbjct: 62 RVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTESE 121
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
++ F +G + + VV+ D T + +G+GFIT+ + L + +++G++ A
Sbjct: 122 FKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRA 181
Query: 147 V 147
V
Sbjct: 182 V 182
>gi|116197887|ref|XP_001224755.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
gi|88178378|gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
Length = 886
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 15/178 (8%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RK+FI GL W+TT + LR FS +GE+ E V+ D ATG+S+G+GF+TFK + +
Sbjct: 389 RKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV 448
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ +DG++ A+ + T+ KIFVG V + + + +FA +G +
Sbjct: 449 K-EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDHEFREYFAQFGRV 499
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ G A L P++ + GK + KKA+P G
Sbjct: 500 VDATLMMDKDTGRPRGFGFVTFESEAGVDACLATPLE-IHGKPIEV-----KKAQPRG 551
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ +TT R F+ +G + +A +++DK TG+ +G+
Sbjct: 457 IIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGF 516
Query: 115 GFITFKHIDGAMLALKEP 132
GF+TF+ G L P
Sbjct: 517 GFVTFESEAGVDACLATP 534
>gi|291402433|ref|XP_002717572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L HF YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|224110618|ref|XP_002315580.1| predicted protein [Populus trichocarpa]
gi|222864620|gb|EEF01751.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 19/195 (9%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLFI G+ W+T+ E LR F YG++ +AVV+ DK TG+ +G+GF+ F
Sbjct: 2 DSDQGKLFIGGISWETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVFADPAVLD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVTVT--NLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
KH IDG M+ K + + + NL A N+ N + +KIFVG +
Sbjct: 62 MVLQDKHTIDGRMVEAKRALSREEQQTNARAGNLNPARNTSGGGN----IRTKKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P ++ D +F +G + + + +D+ T +P+GF + T + L ++G
Sbjct: 118 PPTLTEDGFRQYFEAFGFVADVVIMYDQSTQRPRGFGFISFDTEDAVDRVLQRSFHDLNG 177
Query: 232 KQLNCRLADNKKAKP 246
KQ+ + A K+A P
Sbjct: 178 KQVEVKRALPKEANP 192
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+D K+F+G + + S +KL +F YG++ + + DK TG+P+GF V+ A
Sbjct: 1 MDSDQGKLFIGGISWETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVF-----A 55
Query: 219 QAALVDPI----KTVDGKQLNCRLADNKKAK 245
A++D + T+DG+ + + A +++ +
Sbjct: 56 DPAVLDMVLQDKHTIDGRMVEAKRALSREEQ 86
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E LR FS YGE++EAV++ D+ TG+++G+GF+ F A + ++E
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR+ AV + SG+ +P RKIFVG + + ++ +
Sbjct: 67 K-HNIDGRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L+ ++GK + + A K+
Sbjct: 126 FDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 33 IVERLTSDQLLDVLSSAVARHD-DVLESVRSIADADP---TQRKLFIRGLGWDTTTEGLR 88
+ E+ D + AV R D +VL P RK+F+ GL T +
Sbjct: 64 VQEKHNIDGRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFK 123
Query: 89 SIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
F +G + + VV+ D T + +G+GFIT+ + L + +++G++ AV
Sbjct: 124 KYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAV 182
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
+ P+ KLF+ GL W T++E LR F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 24 NTSPSPSKLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQEAAS 83
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
L P +DG+ + + P +KIFVG V D SAD++ A+F
Sbjct: 84 VDKVLAVPVHTLDGK------RIDPKHATPKSAPKPAKTKKIFVGGVGQDTSADEVRAYF 137
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
A +G +E+ + D+QT + +GF + + E + T+ K++ C+ A K+A
Sbjct: 138 AQFGAVEDAVMLMDQQTKRHRGFGFVTFHSEEAVERVCDIHFHTIKNKKVECKRAQPKEA 197
Query: 245 KPMGP 249
P
Sbjct: 198 VAAAP 202
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 28/216 (12%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT E LR FS +GE+ E V+ D TG+S+G+GF+TFK + + +
Sbjct: 120 KMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVK 179
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + + FA +G +
Sbjct: 180 -EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKDFFAQFGRVV 230
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG--- 248
+ L DK TG+P+GF +++ G +A L + +++ +L + KKA+P G
Sbjct: 231 DATLMMDKDTGRPRGFGFVTFESEAGVEACLARDL------EIHGKLIEVKKAQPRGNLR 284
Query: 249 ------PDGGGPGNVSMNHGDGM----GMVPPSAGG 274
GGPGN G+G G P+AGG
Sbjct: 285 EEEEANRRNGGPGNKFRKQGEGQADASGAGNPAAGG 320
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ +TT + + F+ +G + +A +++DK TG+ +G+
Sbjct: 187 IIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGF 246
Query: 115 GFITFKHIDGAMLAL 129
GF+TF+ G L
Sbjct: 247 GFVTFESEAGVEACL 261
>gi|21593807|gb|AAM65774.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 382
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
Query: 17 SDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIR 76
SD E +D + ++E + ++L++++ + ++ +V AD D +QR +F+R
Sbjct: 113 SDFE----FDKEDIKNLLESYSKEELINLIYKTAEKGSKLISAVFESADRDSSQRNIFVR 168
Query: 77 GLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
GLGWDTT E L++ F YGE+ E V++DK TG++KG+GF+ FK GA ALK P K++
Sbjct: 169 GLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARAALKNPEKRM 228
Query: 137 DGRVTVTNLAVAGNSGNSTNNPVDVSLRKI 166
R A NSG + V KI
Sbjct: 229 YNRTVSCLPARPFNSGKTREQQQPVESVKI 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D S R IFV + D + + L A F YGEI E + DK TG+ KGF ++KT +GA+
Sbjct: 159 DSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGAR 218
Query: 220 AALVDPIKTVDGKQLNC 236
AAL +P K + + ++C
Sbjct: 219 AALKNPEKRMYNRTVSC 235
>gi|74141832|dbj|BAE40987.1| unnamed protein product [Mus musculus]
Length = 320
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YGEIE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGEIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|291415461|ref|XP_002723970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGMKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L HF YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|390354400|ref|XP_001199490.2| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Strongylocentrotus purpuratus]
Length = 318
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 29/297 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL W+T+T+GLR F +GE++E V++ D T +S+G+GF+TF ++
Sbjct: 22 KMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQR 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++D + +A S +P VS +KIFVG + + L F YG++
Sbjct: 82 GTHEVDKKKVDPKVAFPKRS-----HPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
EE L FD+ T + +GF ++ + + + +DGK L + KKA+P M
Sbjct: 137 EEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGK-----LVEVKKAQPKEVM 191
Query: 248 GPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPL------GHHLNSSLG 301
P +M + G+ +A GP G GY ++ PP + S
Sbjct: 192 MPQNAAKNRAAMMR-NLYGIYGYAAPNFTIGPLGRGYTYAPFPPFFSVMPNSYQQQSYAP 250
Query: 302 GPGQVPSSMGGVGAGG----YG----AGLGGPYGGYGGPGSTGYGGLGGAGGGAGAG 350
P V + + G YG G+GG Y P T G+G G G+G
Sbjct: 251 SPSPVNNRYNTTNSPGPMDIYGGSQDQGMGGNYVPAASPQPTHAFGIGSQPTGYGSG 307
>gi|402894543|ref|XP_003910414.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402894545|ref|XP_003910415.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFIRG+ ++TT E LRS F + L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P +++K FVG++ DM L +F
Sbjct: 69 DAAINARPHKVDGRVVEPKRAV---SREDSQRPGAHFTVKKTFVGSIKEDMEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 DQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ F ++GE+ EAV++ D+ TG+++G+GF+ F A + E
Sbjct: 7 KLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIME 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL---------RKIFVGNVPNDMSADKLLA 182
IDGR+ AV + N N S+ RKIFVG + + ++
Sbjct: 67 K-HNIDGRMVEAKKAVPRDDQNILNRSTGSSIHGSPGPGRTRKIFVGGLASTVTETDFRK 125
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F YG I + + +D T +P+GF Y + E L+ ++GK + + A K
Sbjct: 126 YFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAVPK 185
Query: 243 KAKP 246
+ P
Sbjct: 186 ELSP 189
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVL--ESVRSIADADP---TQRKLFIRGLGWDTTTE 85
R I+E+ D + AV R D + S S P RK+F+ GL T
Sbjct: 62 RVIMEKHNIDGRMVEAKKAVPRDDQNILNRSTGSSIHGSPGPGRTRKIFVGGLASTVTET 121
Query: 86 GLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNL 145
R F YG + + VV+ D T + +G+GFIT+ + L + +++G++
Sbjct: 122 DFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKR 181
Query: 146 AV 147
AV
Sbjct: 182 AV 183
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 17/229 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F+ YGE+ E +V+ D T +S+G+GF+TF L
Sbjct: 25 KMFIGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPASVDKVLAN 84
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D +V +A N+ N P V+ +KIFVG + + D + +F +G+I
Sbjct: 85 GPHELDSKVIDPKVAFP-RRPNTANQPKLVTKTKKIFVGGLSASTTVDDVKQYFEQFGKI 143
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
E+ L FDK T + +GFA ++ + +VD + + ++N ++ + KKA+P M
Sbjct: 144 EDAMLMFDKATQRHRGFAFVTFENED-----VVDKVCEIHFHEINNKMVECKKAQPKEVM 198
Query: 248 GPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHL 296
P G ++S G +P Y G YP P G++
Sbjct: 199 MPQGSVDDDLSFTLP---GFLPAGFPYVYSGGSRSTYPI----PTGYYF 240
>gi|225447606|ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT + L+ FS YGE+ EAV++ D+ TG+++G+GF+ F A +KE
Sbjct: 7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR+ AV + NSG+ +P RKIFVG + + ++ +
Sbjct: 67 K-HNIDGRMVEAKKAVPKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y++ E L+ ++GK + + A K+
Sbjct: 126 FDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
L K+F+G + D + D+L +F+ YGE+ E + D+ TG+ +GF V+ A+ +
Sbjct: 5 LGKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVI 64
Query: 223 VDPIKTVDGKQLNCRLADNKKAKP 246
+ +DG R+ + KKA P
Sbjct: 65 KEK-HNIDG-----RMVEAKKAVP 82
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRS-IADADP---TQRKLFIRGLGWDTTTEG 86
R I E+ D + AV + D + S S P RK+F+ GL T
Sbjct: 62 RVIKEKHNIDGRMVEAKKAVPKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESD 121
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+ F +G + + VV+ D T + +G+GFIT++ + L + +++G++ A
Sbjct: 122 FKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRA 181
Query: 147 V 147
V
Sbjct: 182 V 182
>gi|449468578|ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
Length = 436
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 39/289 (13%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D + KLFI G+ WDT+ E LR FS +GE+ +AV++ DK TG+ +G+GF+ F D ++
Sbjct: 2 DSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFS--DPSL 59
Query: 127 L-ALKEPSKKIDGRVTVTNLAVAGNSGNST-----NNPVD-------VSLRKIFVGNVPN 173
L + + IDGR A++ ++ NN +KIFVG +P+
Sbjct: 60 LDQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPS 119
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ D +F YG++ + + +D+ T +P+GF + + VD + +
Sbjct: 120 ALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNED-----AVDRVLYKSFHE 174
Query: 234 LNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLG 293
LN +L + K+A P + G G + YG G + F G
Sbjct: 175 LNGKLVEVKRALPKDANPGSGGRAGYQN--------------YGASGTNSNSFDGRSDGN 220
Query: 294 HHL--NSSLGG-PGQVPSSMGGVGAGGYGAGLGGPYGGYGGPGSTGYGG 339
++ S+ GG P S+ G G GG +G+ PYG YG G YGG
Sbjct: 221 RYMQPQSTAGGFPPYSGYSVSGYGYGGPNSGV--PYGSYGSYGVGMYGG 267
>gi|109109572|ref|XP_001086138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Macaca mulatta]
Length = 320
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFIRG+ ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P +++K FVG++ D
Sbjct: 63 TTVEEVDAAINARPHKVDGRVVEPKRAV---SREDSQRPGAHFTVKKTFVGSIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|291415463|ref|XP_002723971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGMKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L HF YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T++E L F +G + + +++ D T +S+G+GFITF+ +
Sbjct: 177 SDPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSV 236
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
L+ P +DG+ A N + +N +KIFVG V D SA+++ A+F+
Sbjct: 237 DKVLQVPIHTLDGKKIDPKHATPKNRPKTQSN----KTKKIFVGGVSQDTSAEEVKAYFS 292
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 293 QFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 351
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 150 NSGNST-NNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFA 208
+SG ST NN D + K+FVG + S++KL +F +G + + + D T + +GF
Sbjct: 167 SSGRSTPNNGSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFG 226
Query: 209 LFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
++ L PI T+DGK+++ + A K
Sbjct: 227 FITFQEPNSVDKVLQVPIHTLDGKKIDPKHATPK 260
>gi|125526843|gb|EAY74957.1| hypothetical protein OsI_02853 [Oryza sativa Indica Group]
Length = 260
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 57/65 (87%)
Query: 175 MSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL 234
M +++LLAHFA YGEIEEGPLGFDKQTGK +GFALFVYKT EGAQA+LVD +K +DG QL
Sbjct: 1 MPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQL 60
Query: 235 NCRLA 239
C+LA
Sbjct: 61 VCKLA 65
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+E L + F+AYGE+EE + DK TGK +G+ +K +GA +L + K IDG V
Sbjct: 3 SERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVC 62
Query: 144 NLAV 147
LA+
Sbjct: 63 KLAI 66
>gi|18399879|ref|NP_565526.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|20198217|gb|AAD25814.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|330252170|gb|AEC07264.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 382
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
Query: 17 SDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIR 76
SD E +D + ++E + ++L++++ + ++ +V AD D +QR +F+R
Sbjct: 113 SDFE----FDKEDIKNLLESYSKEELINLIYKTAEKGSKLISAVFESADRDSSQRNIFVR 168
Query: 77 GLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
GLGWDTT E L++ F YGE+ E V++DK TG++KG+GF+ FK GA ALK P K++
Sbjct: 169 GLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARAALKNPEKRM 228
Query: 137 DGRVTVTNLAVAGNSGNSTNNPVDVSLRKI 166
R A NSG V KI
Sbjct: 229 YNRTVSCLPARPFNSGKPREQQQPVESVKI 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D S R IFV + D + + L A F YGEI E + DK TG+ KGF ++KT +GA+
Sbjct: 159 DSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGAR 218
Query: 220 AALVDPIKTVDGKQLNC 236
AAL +P K + + ++C
Sbjct: 219 AALKNPEKRMYNRTVSC 235
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLAL 129
RK+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK + +
Sbjct: 10 RKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV 69
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
KE +DG++ A+ + T+ KIFVG V + + + F +G
Sbjct: 70 KE--HYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQEFKEFFTQFGR 119
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P+ + GK + KKA+P G
Sbjct: 120 VIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPL-AICGKPIEV-----KKAQPRG 172
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 56 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAT 106
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ + F+ +G + +A +++DK TG+ +G+GF+TF AL P
Sbjct: 107 EQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRP 155
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
+RK+F+G + + + L +F+ +GE++E + D TG+ +GF +K + +
Sbjct: 9 IRKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVM 68
Query: 223 VDPIKTVDGKQLNCRLADNKKAKP 246
V +DGK + D K+A P
Sbjct: 69 VKE-HYLDGK-----IIDPKRAIP 86
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT + LR F YGE+ EAV++ D+ATG+++G+GFI F
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D + A++ + G++ +P +KIFVG + + ++
Sbjct: 67 KHMIDGRMVEAKKAVPRDDQQ------ALSKSGGSTHGSPGPSRTKKIFVGGLASTVNEA 120
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + E AL ++GK + +
Sbjct: 121 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKALFKTFHELNGKMVEVKR 180
Query: 239 ADNKKAKPMGPDGGGPG---NVSMNHGD 263
A K+ P GP P N MN +
Sbjct: 181 AVPKELSP-GPSMRSPAGGINYVMNRAN 207
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDD-VLESVRSIADADP---TQRKLFIRGLGWDTTTEG 86
R I+E+ D + AV R D L P +K+F+ GL
Sbjct: 62 RVIMEKHMIDGRMVEAKKAVPRDDQQALSKSGGSTHGSPGPSRTKKIFVGGLASTVNEAD 121
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
R+ F +G + + VV+ D T + +G+GFIT+ + AL + +++G++ A
Sbjct: 122 FRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKALFKTFHELNGKMVEVKRA 181
Query: 147 V 147
V
Sbjct: 182 V 182
>gi|291394513|ref|XP_002713753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP KLF+ GL W T++E LR F +G + + +++ D T +S+G+GFITF
Sbjct: 51 DPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVD 110
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
LK P +DG+ A N N +KIFVG V D S++++ A+F
Sbjct: 111 KVLKCPIHTLDGKKIDPKHATPKNRAKQANR-----TKKIFVGGVSQDTSSEEVKAYFNQ 165
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 166 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 223
>gi|318086954|gb|ADV40069.1| putative heterogeneous nuclear ribonucleoprotein isoform A
[Latrodectus hesperus]
Length = 293
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL W+TT E L+ FS YGE+ + VV+ + T +S+G+GF+TFK + L
Sbjct: 17 KIFVGGLSWETTQEKLQEYFSRYGEVVDCVVMKNSETNRSRGFGFVTFKDVACVAKVLSS 76
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR + +S +S N K+F+G +P + + L + F+ YG +
Sbjct: 77 GPHEVDGRTIDPKVC---SSRDSQQNKKAGQYPKVFLGGLPPNCTETDLRSFFSRYGTVV 133
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD--NKKAKPMGP 249
E L +D++ K +GF ++T + + + ++GK++ C+ A+ +KK GP
Sbjct: 134 EVVLMYDQEKKKSRGFGFLSFETEDSVKQVCAEHFVKINGKKIECKHAEPRDKKRPSQGP 193
Query: 250 DGGGPGN 256
+ G P
Sbjct: 194 NSGTPNQ 200
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 15/178 (8%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RK+FI GL W+TT + LR FS +GE+ E V+ D ATG+S+G+GF+TFK + +
Sbjct: 14 RKMFIGGLNWETTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV 73
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ +DG++ A+ + T+ KIFVG V + + + +FA +G +
Sbjct: 74 K-EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDHEFREYFAQFGRV 124
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ G +A L ++ + GK + KKA+P G
Sbjct: 125 VDATLMMDKDTGRPRGFGFVTFESEAGVEACLSANLE-IHGKPIEV-----KKAQPRG 176
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +TT
Sbjct: 60 LTFKDPKTVNIVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQETT 110
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
R F+ +G + +A +++DK TG+ +G+GF+TF+ G L
Sbjct: 111 DHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACL 156
>gi|332206587|ref|XP_003252377.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Nomascus leucogenys]
Length = 321
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 3/201 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 10 EPKQLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 69
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV A++ +S ++++KIFVG + D L +F
Sbjct: 70 DAAMNARPHKVDGRVVEPKRAIS--REDSQRPDAHLTVKKIFVGGIKEDTEEHHLRGYFE 127
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 128 QYGKIEVIEIMTDQGSGKKRGFAFLTFDDHDSVDKIIIQKYHTVNGHICEVRKALSKQEM 187
Query: 246 PMGPDGGGPGNVSMNHGDGMG 266
+ S N DG G
Sbjct: 188 ASASSSQRGRSGSGNFSDGRG 208
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 18/192 (9%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D K+FI G+ W+T+ E LR FS YGE+ + V++ D+ TG+++G+GF+ F
Sbjct: 2 DSDHCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIVD 61
Query: 127 LALKEPSKKIDGRVTVTNLAV-----AGNSGNSTNNPV-------DVSLRKIFVGNVPND 174
+AL+E IDGR AV NS NN V +KIFVG +P +
Sbjct: 62 IALQE-KHTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYGGGSVRTKKIFVGGLPAN 120
Query: 175 MSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL 234
++ + +F +G I + + +D T +P+GF + + + ++ L QL
Sbjct: 121 LTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQKSF-----HQL 175
Query: 235 NCRLADNKKAKP 246
N +L + K+A P
Sbjct: 176 NEKLVEVKRALP 187
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T++E L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 194 SDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 253
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SAD++ A+F+
Sbjct: 254 DKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSADEVKAYFS 308
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 309 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 367
>gi|410899428|ref|XP_003963199.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Takifugu rubripes]
Length = 291
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D + +S+G+GF+T+ +D
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVDEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
LA+ K+DGRV AV S +N P V+++KIFVG + D + +F
Sbjct: 68 DLAMTARPHKVDGRVVEPKRAV---SREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G+IE + D+ +GK +GFA + + ++ T++ NC +
Sbjct: 125 ERFGKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRIVIQKYHTINSH--NCEVRKALTR 182
Query: 245 KPMGPDGGGPG 255
+ M G G G
Sbjct: 183 QEMQTSGAGTG 193
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT +R F +G++E +I D+ +
Sbjct: 82 VVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIITDRNS 141
Query: 109 GKSKGYGFITF 119
GK +G+ F+TF
Sbjct: 142 GKKRGFAFVTF 152
>gi|111306451|gb|AAI21134.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|146197797|dbj|BAF57616.1| pRM10 protein [Dugesia japonica]
Length = 325
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 10/188 (5%)
Query: 52 RHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKS 111
+ +D +S+ + D D RKLF+ GL W+TT E L++ F +G++ V+ LDK TG S
Sbjct: 53 KSNDKADSINNKVDEDDDSRKLFVGGLSWETTEEDLKNYFETWGKVAHCVIKLDKMTGNS 112
Query: 112 KGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
+G+GF+T D L+ P ++ N + T P +KIFVG +
Sbjct: 113 RGFGFVTMDTEDSLKKVLEVPEHRL------KNKKIDPKPAKPTKEPN----KKIFVGGL 162
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
+++ +++ +F+ YG +E L FD GK K + + T + A+ A+++ + V G
Sbjct: 163 SPEVTEEQIKEYFSQYGSVESVDLPFDTSKGKRKPYVFLSFTTEDAAKNAIINEKQDVLG 222
Query: 232 KQLNCRLA 239
+ + R+A
Sbjct: 223 SKCDVRMA 230
>gi|190360152|sp|P0C7M2.1|RA1L3_HUMAN RecName: Full=Putative heterogeneous nuclear ribonucleoprotein
A1-like 3; Short=hnRNP A1-like 3; AltName: Full=hnRNP
core protein A1-like 3
gi|119621694|gb|EAX01289.1| hCG2020860, isoform CRA_b [Homo sapiens]
gi|119621695|gb|EAX01290.1| hCG2020860, isoform CRA_b [Homo sapiens]
Length = 320
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|344266091|ref|XP_003405114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Loxodonta africana]
Length = 320
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 STVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT + L+ FS YGE+ EAV++ D+ TG+++G+GF+ F A +KE
Sbjct: 7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR+ AV + NSG+ +P RKIFVG + + ++ +
Sbjct: 67 K-HNIDGRMVEAKKAVPKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y++ E L+ ++GK + + A K+
Sbjct: 126 FDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
L K+F+G + D + D+L +F+ YGE+ E + D+ TG+ +GF V+ A+ +
Sbjct: 5 LGKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVI 64
Query: 223 VDPIKTVDGKQLNCRLADNKKAKP 246
+ +DG R+ + KKA P
Sbjct: 65 KEK-HNIDG-----RMVEAKKAVP 82
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RK+F+ GL T + F +G + + VV+ D T + +G+GFIT++ + L
Sbjct: 106 RKIFVGGLASTVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLL 165
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 166 KTFHELNGKMVEVKRAV 182
>gi|426341485|ref|XP_004036065.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Gorilla gorilla gorilla]
Length = 320
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T++E L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 221 SDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 280
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SAD++ A+F+
Sbjct: 281 DKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSADEVKAYFS 335
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 336 QFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 394
>gi|74204146|dbj|BAE39838.1| unnamed protein product [Mus musculus]
Length = 320
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|380792669|gb|AFE68210.1| heterogeneous nuclear ribonucleoprotein A1 isoform a, partial
[Macaca mulatta]
Length = 317
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|414883901|tpg|DAA59915.1| TPA: hypothetical protein ZEAMMB73_814821 [Zea mays]
Length = 448
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 20/203 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T+ + LR F +GE+ EAV++ D++TG+++G+GF+ F
Sbjct: 8 KLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTMD 67
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D + V+ ++G+ST +P RKIFVG +P+ ++
Sbjct: 68 KHTIDGRMVEAKKAVPRDDHSI------VSKSNGSSTGSPGPGRTRKIFVGGLPSSVTEA 121
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 122 DFRRYFEQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKR 181
Query: 239 ADNKKAKPMGPDGGGPGNVSMNH 261
A K+ P GP P V N+
Sbjct: 182 AVPKEQSP-GPVVRSPVGVGQNY 203
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPT-------QRKLFIRGLGWDTT 83
R +++ T D + AV R D S+ S ++ T RK+F+ GL T
Sbjct: 63 RVTMDKHTIDGRMVEAKKAVPRDD---HSIVSKSNGSSTGSPGPGRTRKIFVGGLPSSVT 119
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 120 EADFRRYFEQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEV 179
Query: 144 NLAV 147
AV
Sbjct: 180 KRAV 183
>gi|358415649|ref|XP_003583166.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
+A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DVAMNARPHKVDGRVGELKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|214241|gb|AAA49742.1| ribonucleoprotein A1b [Xenopus laevis]
Length = 351
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S A +P Q RKLFI GL ++TT E LR F +G L + VV+ D + +S+G+GF+T+
Sbjct: 3 KSEAPNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADK 179
D A+ K+DGRV AV+ +S+ ++++KIFVG + D D
Sbjct: 63 LSTDEVDAAMTARPHKVDGRVVEPKRAVSRE--DSSRPGAHLTVKKIFVGGIKEDTEEDH 120
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L +F YG+IE + D+ +GK +GFA ++ + ++ TV+ R A
Sbjct: 121 LREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKA 180
Query: 240 DNKK 243
+K+
Sbjct: 181 LSKQ 184
>gi|403296845|ref|XP_003939304.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Saimiri
boliviensis boliviensis]
Length = 320
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG++ D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|148671983|gb|EDL03930.1| mCG15678, isoform CRA_a [Mus musculus]
Length = 371
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 62 SIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S ++ +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 2 SKSEKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYA 61
Query: 121 HIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADK 179
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 62 TVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHH 118
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R A
Sbjct: 119 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 178
Query: 240 DNKK 243
+K+
Sbjct: 179 LSKQ 182
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 17/178 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALK 130
K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK + +K
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 170
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
E +DG++ A+ + T+ KIFVG V + + F +G +
Sbjct: 171 E--HYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQDFKQFFMQFGRV 220
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 221 IDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKTIEV-----KKAQPRG 272
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 156 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAT 206
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF AL P + + + V
Sbjct: 207 EQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKTIEVK 266
Query: 144 NLAVAGN 150
GN
Sbjct: 267 KAQPRGN 273
>gi|291389618|ref|XP_002711396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L HF YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|291389616|ref|XP_002711395.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L HF YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|357122209|ref|XP_003562808.1| PREDICTED: uncharacterized protein LOC100836006 [Brachypodium
distachyon]
Length = 472
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 19/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T E LR F +GE+ EAV++ D+ TG+++G+GFI F
Sbjct: 7 KLFVGGISWETDEERLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEPGVAERVTMD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D + + N+G+S +P V RKIFVG + ++++
Sbjct: 67 KHMIDGRMVEAKKAVPRDDQSI------ASKNNGSSIGSPGPVRTRKIFVGGLASNVTEV 120
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+ +F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 121 EFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR 180
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 181 AVPKEQSP 188
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVLESVR---SIADADPTQ-RKLFIRGLGWDTT 83
+ ER+T D+ ++D AV R D + S SI P + RK+F+ GL + T
Sbjct: 59 VAERVTMDKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVT 118
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 119 EVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEV 178
Query: 144 NLAV 147
AV
Sbjct: 179 KRAV 182
>gi|296216773|ref|XP_002754712.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+ + ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVRYAAVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ S K+DGRV AV S + P ++++KIF+G + D L +F
Sbjct: 69 DAAMNARSHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFIGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEMIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|119617171|gb|EAW96765.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_e [Homo
sapiens]
Length = 317
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 17/178 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALK 130
K+FI GL W+TT + LR FS +GE++E V+ D ATG+S+G+GF+TFK + +K
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
E +DG++ A+ + T+ KIFVG V + + + F +G +
Sbjct: 166 E--HYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQEFKEFFTQFGRV 215
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + +AAL P+ + GK + KKA+P G
Sbjct: 216 IDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPL-AICGKPIEV-----KKAQPRG 267
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 151 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAT 201
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ + F+ +G + +A +++DK TG+ +G+GF+TF AL P
Sbjct: 202 EQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRP 250
>gi|440900708|gb|ELR51786.1| hypothetical protein M91_06025, partial [Bos grunniens mutus]
Length = 315
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 4 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 63
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 64 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 120
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 121 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 179
>gi|148671986|gb|EDL03933.1| mCG15678, isoform CRA_d [Mus musculus]
Length = 326
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 9 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 68
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 69 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 125
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 126 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 185
Query: 239 ADNKK 243
A +K+
Sbjct: 186 ALSKQ 190
>gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Homo sapiens]
gi|6754220|ref|NP_034577.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Mus musculus]
gi|114052384|ref|NP_001039376.1| heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|116175259|ref|NP_001070686.1| heterogeneous nuclear ribonucleoprotein A1 [Sus scrofa]
gi|148529006|ref|NP_001091892.1| heterogeneous nuclear ribonucleoprotein A1-like 1 [Pan troglodytes]
gi|308193354|ref|NP_001184040.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|73996139|ref|XP_848386.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Canis lupus familiaris]
gi|332864208|ref|XP_003318234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
gi|354503661|ref|XP_003513899.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Cricetulus
griseus]
gi|402886231|ref|XP_003906538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Papio
anubis]
gi|410058477|ref|XP_003954396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Pan troglodytes]
gi|410964599|ref|XP_003988841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Felis catus]
gi|426224335|ref|XP_004006327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Ovis aries]
gi|1350822|sp|P49312.2|ROA1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=HDP-1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName:
Full=Topoisomerase-inhibitor suppressed; AltName:
Full=hnRNP core protein A1
gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=Unwinding protein 1; Short=UP1;
AltName: Full=hnRNP core protein A1
gi|70819|pir||DDRT helix-destabilizing protein - rat
gi|87651|pir||S04617 heterogeneous ribonuclear particle protein A1 - human
gi|193324|gb|AAA37633.1| RNA binding protein [Mus musculus]
gi|296650|emb|CAA31191.1| hnrnp a1 protein [Homo sapiens]
gi|496898|emb|CAA56072.1| hnRNPcore protein A1 [Homo sapiens]
gi|1711242|dbj|BAA13162.1| TIS [Mus musculus]
gi|12803103|gb|AAH02355.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|12841583|dbj|BAB25267.1| unnamed protein product [Mus musculus]
gi|15082486|gb|AAH12158.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|16307046|gb|AAH09600.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|21707258|gb|AAH33714.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|26353286|dbj|BAC40273.1| unnamed protein product [Mus musculus]
gi|47125420|gb|AAH70315.1| HNRPA1 protein [Homo sapiens]
gi|49257442|gb|AAH73162.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|49522847|gb|AAH74502.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|51490837|emb|CAH18571.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|51873929|gb|AAH80675.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|53236995|gb|AAH83136.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|55930978|gb|AAH52296.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|56971262|gb|AAH88150.1| Hnrpa1 protein [Rattus norvegicus]
gi|67968511|dbj|BAE00617.1| unnamed protein product [Macaca fascicularis]
gi|74180018|dbj|BAE36552.1| unnamed protein product [Mus musculus]
gi|74183107|dbj|BAE22518.1| unnamed protein product [Mus musculus]
gi|74184983|dbj|BAE39104.1| unnamed protein product [Mus musculus]
gi|74189079|dbj|BAE39302.1| unnamed protein product [Mus musculus]
gi|74204144|dbj|BAE39837.1| unnamed protein product [Mus musculus]
gi|74204330|dbj|BAE39920.1| unnamed protein product [Mus musculus]
gi|74204859|dbj|BAE20929.1| unnamed protein product [Mus musculus]
gi|74214152|dbj|BAE40333.1| unnamed protein product [Mus musculus]
gi|74214339|dbj|BAE40409.1| unnamed protein product [Mus musculus]
gi|86823844|gb|AAI05414.1| Heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|115371763|gb|ABI96206.1| ROA1 [Sus scrofa]
gi|119617167|gb|EAW96761.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617175|gb|EAW96769.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617176|gb|EAW96770.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|146741382|dbj|BAF62347.1| heterogeneous nuclear ribonucleoprotein A1, transcript variant 1
[Pan troglodytes verus]
gi|148671984|gb|EDL03931.1| mCG15678, isoform CRA_b [Mus musculus]
gi|149031879|gb|EDL86791.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|149031881|gb|EDL86793.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|158255662|dbj|BAF83802.1| unnamed protein product [Homo sapiens]
gi|208966454|dbj|BAG73241.1| heterogeneous nuclear ribonucleoprotein A1 [synthetic construct]
gi|296487907|tpg|DAA30020.1| TPA: heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|335772612|gb|AEH58124.1| heterogeneous nuclear ribonucleoprotein A-like protein [Equus
caballus]
gi|380812306|gb|AFE78027.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
gi|380812308|gb|AFE78028.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
Length = 320
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|148671985|gb|EDL03932.1| mCG15678, isoform CRA_c [Mus musculus]
Length = 335
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 24 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 83
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 84 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 140
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 141 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 199
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP KLF+ GL W T++E LR F +G + + +++ D T +S+G+GFITF
Sbjct: 57 DPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVD 116
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
LK P +DG+ A N N +KIFVG V D S+D++ A+F
Sbjct: 117 KVLKCPIHTLDGKKIDPKHATPKNRAKQANR-----TKKIFVGGVSQDTSSDEVKAYFNQ 171
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 172 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 229
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 4/181 (2%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+ +DP KLF+ GL W T++E L F +G++ + +++ D T +S+G+GFITF+ +
Sbjct: 95 SSSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPN 154
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
LK P +DG+ A N + +N +KIFVG V D SA+++ +
Sbjct: 155 SVDKVLKVPIHTLDGKKIDPKHATPKNRPKTQSN----KTKKIFVGGVSQDTSAEEVRQY 210
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F+ +G+++E + D+QT + +GF ++ + T+ K++ C+ A K+
Sbjct: 211 FSQFGKVDETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 270
Query: 244 A 244
A
Sbjct: 271 A 271
>gi|426341487|ref|XP_004036066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Gorilla gorilla gorilla]
Length = 320
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRDSGKKRGFAFVTFDDHDSLDKIVIQKYHTVKGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT E L++ FS +GE+ E V+ D ATG+S+G+GF+TFK + + +
Sbjct: 106 KMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 165
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ T+ KIFVG V + + + F +G +
Sbjct: 166 -EHYLDGKIIDPKRAIPREEQERTS--------KIFVGGVSQEATEEDFTNFFKQFGRVV 216
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK+TG+P+GF + A L P++ + GKQ+ K+A+P G
Sbjct: 217 DATLMMDKETGRPRGFGFVTFDGDAAVDATLRAPLQIL-GKQIEV-----KRAQPRG 267
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 17/178 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALK 130
K+FI GL W+TT + LR FS +GE++E V+ D ATG+S+G+GF+TFK + +K
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
E +DG++ A+ + T+ KIFVG V + + + F +G +
Sbjct: 166 E--HYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQEFKEFFTQFGRV 215
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + +AAL P+ + GK + KKA+P G
Sbjct: 216 IDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPL-AICGKPIEV-----KKAQPRG 267
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 151 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAT 201
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ + F+ +G + +A +++DK TG+ +G+GF+TF AL P
Sbjct: 202 EQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRP 250
>gi|58761496|ref|NP_001011724.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|58761498|ref|NP_001011725.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|190356061|sp|Q32P51.2|RA1L2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1-like 2;
Short=hnRNP A1-like 2; AltName: Full=hnRNP core protein
A1-like 2
gi|119572426|gb|EAW52041.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
gi|119572427|gb|EAW52042.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
Length = 320
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNTTPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRK 179
Query: 239 A 239
A
Sbjct: 180 A 180
>gi|74220381|dbj|BAE31416.1| unnamed protein product [Mus musculus]
Length = 320
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|426223452|ref|XP_004005889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKE 184
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 18/197 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + L+ FS +GE+ E V+ D ATG+S+G+GF+TFK + + +
Sbjct: 108 KMFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 167
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ T+ KIFVG V + + + F +G +
Sbjct: 168 -EHYLDGKIIDPKRAIPREEQERTS--------KIFVGGVSQEATEEDFTNFFKQFGRVV 218
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MG 248
+ L DK+TG+P+GF + A L P++ + GKQ+ K+A+P M
Sbjct: 219 DATLMMDKETGRPRGFGFVTFDGDAAVDATLRGPLQIL-GKQIEV-----KRAQPRGNMR 272
Query: 249 PDGGGPGNVSMNHGDGM 265
D GG GN G+ +
Sbjct: 273 DDDGGDGNKKFGRGNKI 289
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP KLF+ GL W T++E L F +G + + +++ D T +S+G+GFITF+ +
Sbjct: 107 DPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVD 166
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
L+ P +DG+ A N + +N +KIFVG V D SA+++ A+F+
Sbjct: 167 KVLQVPIHTLDGKKIDPKHATPKNRPKTQSN----KTKKIFVGGVSQDTSAEEVKAYFSQ 222
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 223 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 280
>gi|340515592|gb|EGR45845.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR FS +GE+ E V+ D ++G+S+G+GF+TFK + + +
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVK 172
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V D + + +FA +G +
Sbjct: 173 -EHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQDTTDQEFREYFAQFGRVV 223
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ G A + P++ + GK + KKA+P G
Sbjct: 224 DATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLE-IHGKPIEV-----KKAQPRG 274
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ DTT + R F+ +G + +A +++DK TG+ +G+
Sbjct: 180 IIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGF 239
Query: 115 GFITFKHIDGAMLALKEP 132
GF+TF+ G + P
Sbjct: 240 GFVTFESEAGVDACINVP 257
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 170 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 229
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 230 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 284
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 285 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 343
>gi|426254471|ref|XP_004020902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ + A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVVAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 170 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 229
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 230 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 284
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 285 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 343
>gi|147900728|ref|NP_001081282.1| heterogeneous nuclear ribonucleoproteins A1 homolog [Xenopus
laevis]
gi|47938744|gb|AAH72090.1| LOC397751 protein [Xenopus laevis]
Length = 365
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S A +P Q RKLFI GL ++TT E LR F +G L + VV+ D + +S+G+GF+T+
Sbjct: 3 KSEAPNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADK 179
D A+ K+DGRV AV+ +S+ ++++KIFVG + D D
Sbjct: 63 LSTDEVDAAMTARPHKVDGRVVEPKRAVSRE--DSSRPGAHLTVKKIFVGGIKEDTEEDH 120
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L +F YG+IE + D+ +GK +GFA ++ + ++ TV+ R A
Sbjct: 121 LREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNCEVRKA 180
Query: 240 DNKK 243
+K+
Sbjct: 181 LSKQ 184
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR F+ +GE+ E V+ D TG+S+G+GF+TFK + + +
Sbjct: 48 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK 107
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + + +FA +G +
Sbjct: 108 -EHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKDYFAQFGRVV 158
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ EG A L ++ + GK + KKA+P G
Sbjct: 159 DATLMMDKDTGRPRGFGFVTFESEEGVDACLKTHLE-IHGKPIEV-----KKAQPRG 209
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ +TT
Sbjct: 93 LTFKDAKTVNIVMVKEHFLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQETT 143
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+ + F+ +G + +A +++DK TG+ +G+GF+TF+ +G LK
Sbjct: 144 DQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEEGVDACLK 190
>gi|291389294|ref|XP_002711081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Oryctolagus
cuniculus]
Length = 371
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 169 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 228
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 229 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 283
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 284 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 342
>gi|432098521|gb|ELK28236.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 316
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 4/170 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++ A+
Sbjct: 14 RKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K+DGRV AV S + P ++++KIFVG + D L +F YG+
Sbjct: 74 ARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEVHHLRDYFEQYGK 130
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
IE + D+ +GK +GFA + + ++ TV+G+ R A
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGRSCEVRKA 180
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT LR F YG++E ++ D+ +
Sbjct: 83 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEVHHLRDYFEQYGKIEVIEIMTDRGS 142
Query: 109 GKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
GK +G+ F+TF D + + ++GR A+
Sbjct: 143 GKKRGFAFVTFDDHDSVDKIVIQKYHTVNGRSCEVRKAL 181
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
LRK+F+G + + + + L +HF +G + + + D T + +GF Y T E AA
Sbjct: 12 QLRKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 222 LVDPIKTVDGK 232
+ VDG+
Sbjct: 72 MNARPHKVDGR 82
>gi|80477437|gb|AAI08267.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
Length = 320
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNTTPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRK 179
Query: 239 A 239
A
Sbjct: 180 A 180
>gi|344266093|ref|XP_003405115.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Loxodonta africana]
Length = 370
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 25/195 (12%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR FS +GE+ E V+ D +TG+S+G+GF+TFK + + +
Sbjct: 117 KMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVNIVMVK 176
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V D + + FA +G +
Sbjct: 177 -EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQDTTDQEFKDFFAQFGRVV 227
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG--- 248
+ L DK TG+P+GF +++ G A L ++ + GK + KKA+P G
Sbjct: 228 DATLMMDKDTGRPRGFGFVTFESEAGVDACLAQELE-IHGKPIEV-----KKAQPRGNMR 281
Query: 249 -------PDGGGPGN 256
GGGPGN
Sbjct: 282 EEEEANRRAGGGPGN 296
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ DTT + + F+ +G + +A +++DK TG+ +G+
Sbjct: 184 IIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGF 243
Query: 115 GFITFKHIDGAMLALKE 131
GF+TF+ G L +
Sbjct: 244 GFVTFESEAGVDACLAQ 260
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 182 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 241
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 242 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 296
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 297 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 355
>gi|402908388|ref|XP_003916925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Papio anubis]
gi|402908390|ref|XP_003916926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Papio anubis]
Length = 351
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLA 128
K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+DG++ A+ + T+ KIFVG V + + FA +G
Sbjct: 169 ----EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEHDFKEFFAQFG 216
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 217 RVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLE-ICGKPIEV-----KKAQPRG 270
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +
Sbjct: 154 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAN 204
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ F+ +G + +A +++DK TG+ +G+GF+TF AL P + + V
Sbjct: 205 EHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEICGKPIEVK 264
Query: 144 NLAVAGN 150
GN
Sbjct: 265 KAQPRGN 271
>gi|326489793|dbj|BAK01877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 19/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT + LR F YGE+ EAV++ D+ATG+++G+GFI F
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D + A++ + G++ +P +KIFVG + + ++
Sbjct: 67 KHMIDGRMVEAKKAVPRDDQQ------ALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEA 120
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 121 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 180
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 181 AVPKELSP 188
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDD-VLESVRSIADADP---TQRKLFIRGLGWDTTTEG 86
R I+E+ D + AV R D L A P +K+F+ GL T
Sbjct: 62 RVIMEKHMIDGRMVEAKKAVPRDDQQALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEAD 121
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
R+ F +G + + VV+ D T + +G+GFIT+ D AL + +++G++ A
Sbjct: 122 FRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRA 181
Query: 147 V 147
V
Sbjct: 182 V 182
>gi|355766014|gb|EHH62484.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
fascicularis]
Length = 372
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 201 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 260
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 261 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 315
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 316 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 374
>gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus]
Length = 313
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|358396002|gb|EHK45389.1| hypothetical protein TRIATDRAFT_131648 [Trichoderma atroviride IMI
206040]
Length = 405
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT + LR FS +GE+ E V+ D ++G+S+G+GF+TFK + + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTVNIVMVK- 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V D + + +FA +G + +
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQDTTDQEFREYFAQFGRVVD 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
L DK TG+P+GF +++ G A + P++ + GK + KKA+P G
Sbjct: 112 ATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLE-IHGKPIEV-----KKAQPRG 161
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ DTT
Sbjct: 45 LTFKDAKTVNIVMVKEHFLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQDTT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ R F+ +G + +A +++DK TG+ +G+GF+TF+ G + P
Sbjct: 96 DQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINVP 144
>gi|36102|emb|CAA29922.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F +G+IE + D+ +GK KGFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQFGKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLA 128
K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+DG++ A+ + T+ KIFVG V + + FA +G
Sbjct: 169 ----EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEHDFKEFFAQFG 216
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 217 RVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLE-ICGKPIEV-----KKAQPRG 270
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +
Sbjct: 154 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAN 204
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ F+ +G + +A +++DK TG+ +G+GF+TF AL P + + V
Sbjct: 205 EHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEICGKPIEVK 264
Query: 144 NLAVAGN 150
GN
Sbjct: 265 KAQPRGN 271
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 62 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 121
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 122 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 178
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 179 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 237
>gi|355564301|gb|EHH20801.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
mulatta]
Length = 372
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR FS +GE+ E V+ D +TG+S+G+GF+TFK + + +
Sbjct: 120 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK 179
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + + +FA +G +
Sbjct: 180 -EHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKEYFAQFGRVV 230
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF ++ G A + P++ + GK + KKA+P G
Sbjct: 231 DATLMMDKDTGRPRGFGFVTFENEAGVDACINVPLE-IHGKPIEV-----KKAQPRG 281
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ +TT
Sbjct: 165 LTFKDAKTVNIVMVKEHFLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQETT 215
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ + F+ +G + +A +++DK TG+ +G+GF+TF++ G + P
Sbjct: 216 DQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINVP 264
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 199 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 258
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 259 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 313
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 314 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 372
>gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Homo sapiens]
gi|397472158|ref|XP_003807623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Pan
paniscus]
gi|288558857|sp|P09651.5|ROA1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=hnRNP core protein A1
gi|119617168|gb|EAW96762.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|119617174|gb|EAW96768.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|380812310|gb|AFE78029.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Macaca
mulatta]
Length = 372
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|335347347|ref|NP_001229438.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
gi|410964601|ref|XP_003988842.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Felis catus]
gi|426224339|ref|XP_004006329.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Ovis aries]
gi|74222222|dbj|BAE26919.1| unnamed protein product [Mus musculus]
gi|149031878|gb|EDL86790.1| rCG50547, isoform CRA_b [Rattus norvegicus]
gi|149031880|gb|EDL86792.1| rCG50547, isoform CRA_b [Rattus norvegicus]
Length = 373
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|85060507|ref|NP_001034218.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Mus musculus]
gi|59808855|gb|AAH89340.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|62531241|gb|AAH92395.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|74144667|dbj|BAE27318.1| unnamed protein product [Mus musculus]
gi|74185136|dbj|BAE39169.1| unnamed protein product [Mus musculus]
gi|74219989|dbj|BAE40574.1| unnamed protein product [Mus musculus]
Length = 373
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 200 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 259
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 260 QKVLKVPIHTLDGKKIDPKHATPKNRPRQANK-----TKKIFVGGVSQDTSAEEVKAYFS 314
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 315 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 373
>gi|112421201|ref|NP_001036248.1| heterogeneous nuclear ribonucleoprotein A1 [Macaca mulatta]
gi|2500575|sp|Q28521.3|ROA1_MACMU RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|1332379|gb|AAB01436.1| hnRNP A1-gamma isoform [Macaca mulatta]
Length = 320
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEKVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 198 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 257
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 258 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 312
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 313 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 371
>gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]
gi|133255|sp|P04256.3|ROA1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; Short=HDP; AltName: Full=Single-strand
RNA-binding protein; AltName: Full=hnRNP core protein A1
gi|204580|gb|AAA41314.1| helix destabilizing protein [Rattus norvegicus]
Length = 320
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 A 239
A
Sbjct: 180 A 180
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLA 128
K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+DG++ A+ + T+ KIFVG V + + F +G
Sbjct: 172 ----EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEQDFKQFFMQFG 219
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 220 RVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEV-----KKAQPRG 273
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +
Sbjct: 157 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAN 207
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF AL P + + + V
Sbjct: 208 EQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVK 267
Query: 144 NLAVAGN 150
GN
Sbjct: 268 KAQPRGN 274
>gi|209156106|gb|ACI34285.1| DAZ-associated protein 1 [Salmo salar]
Length = 436
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 27/288 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR+ FS YGE+ + V++ DK T +S+G+GF+ FK + L+
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 132 PSKKIDGRVT---------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
+DGR + V G + +KIFVG +P++ +L
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKVRTKDGWKGSKADSNKSKKIFVGGIPHNCGEPELRE 131
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+ +
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 243 KAK---PMGPDGGGPGNVSMNHGDGMGMVPPSAG-GSYGGPG---GHGYPFSGPPPLGHH 295
+ +GP+ GP + ++ +G P SYG PG G P G G
Sbjct: 192 DSNAPGQLGPNQWGPRGI-LSAANGWSAQPAQGWQQSYGPPGVWVSTGQPLGG---YGPP 247
Query: 296 LNSSLGGPGQVPSS------MGGVGAGGYGAGLGGPYGGYGGPGSTGY 337
L++ G P Q PSS + AGG+GA GY P GY
Sbjct: 248 LSAGRGAPAQ-PSSPFNAFLVTAAPAGGFGAPQAYAQQGYSTPPQFGY 294
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S AD++ + +K+F+ G+ + LR F+ +G + E V+I D + +G+GFITF+
Sbjct: 105 SKADSNKS-KKIFVGGIPHNCGEPELREYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 162
>gi|297681162|ref|XP_002818335.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pongo abelii]
Length = 321
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPKQLRKLFIGGLNFETTNESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV A+ S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAI---SREDSQRPGAHLTVKKIFVGGIKKDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHVCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|119572425|gb|EAW52040.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a
[Homo sapiens]
Length = 309
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNTTPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRK 179
Query: 239 A 239
A
Sbjct: 180 A 180
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALK 130
K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK + +K
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 172
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
E +DG++ A+ + T+ KIFVG V D + F +G +
Sbjct: 173 E--HYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQDANEQDFKKFFMQFGRV 222
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 223 VDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEV-----KKAQPRG 274
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ D
Sbjct: 158 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQERTSKIFVGGVSQDAN 208
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF L +P + + + V
Sbjct: 209 EQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVK 268
Query: 144 NLAVAGN 150
GN
Sbjct: 269 KAQPRGN 275
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLA 128
K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 100 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 159
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+DG++ A+ + T+ KIFVG V + + F +G
Sbjct: 160 ----EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEQDFKQFFMQFG 207
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 208 RVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEV-----KKAQPRG 261
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +
Sbjct: 145 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAN 195
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF AL P + + + V
Sbjct: 196 EQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVK 255
Query: 144 NLAVAGN 150
GN
Sbjct: 256 KAQPRGN 262
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR FS +GE+ E V+ D TG+S+G+GF+TFK + + +
Sbjct: 116 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 175
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V D + + FA +G +
Sbjct: 176 -EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQDTTDQEFREFFAQFGRVI 226
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ G A + P++ + GK + K+A+P G
Sbjct: 227 DATLMMDKDTGRPRGFGFVTFESEAGVDACINIPLE-IHGKPIEV-----KRAQPRG 277
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ DTT
Sbjct: 161 LTFKDAKTVNIVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQDTT 211
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ R F+ +G + +A +++DK TG+ +G+GF+TF+ G + P
Sbjct: 212 DQEFREFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDACINIP 260
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 198 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 257
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 258 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 312
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 313 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 371
>gi|395540858|ref|XP_003772367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Sarcophilus
harrisii]
Length = 372
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T++E L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 216 SDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 275
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 276 DKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 330
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 331 QFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 389
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 142 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 201
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 202 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 256
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 257 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 315
>gi|71895177|ref|NP_001026424.1| heterogeneous nuclear ribonucleoprotein A1 [Gallus gallus]
gi|53130302|emb|CAG31480.1| hypothetical protein RCJMB04_6o1 [Gallus gallus]
Length = 368
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 GQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|390465683|ref|XP_003733453.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 4/174 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++ A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K+DGRV AV S + P ++++KIFVG + D L +F YG+
Sbjct: 74 ARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGK 130
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 131 IEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT LR F YG++E ++ D+ +
Sbjct: 83 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTEIMTDRGS 142
Query: 109 GKSKGYGFITFKHIDGA 125
GK +G+ F+TF D
Sbjct: 143 GKKRGFAFVTFDDHDSV 159
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
LRK+F+G + + + + L +HF +G + + + D T + +GF Y T E AA
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 222 LVDPIKTVDGK 232
+ VDG+
Sbjct: 72 MNARPHKVDGR 82
>gi|294896748|ref|XP_002775712.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881935|gb|EER07528.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1162
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 50/283 (17%)
Query: 6 KRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIAD 65
+R+ + + + L+ P+ + D R I+ QL+++L+ A +V +++R++
Sbjct: 43 RRRAELPETIRTFLDRPDEVARDDVRTIINNFEKTQLVELLAHASTISKEVRDALRAVVG 102
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK----- 120
++ T R+L +R + + ++++ +++ +G +EE V+ D+ TG+SKG+ F+TF+
Sbjct: 103 SNATFRRLLVRNISFQSSSDTVKNALGKFGVIEEGTVVYDRHTGRSKGFAFVTFERVESA 162
Query: 121 ------------HIDGAMLALKEPSKKID-----GRVTVT-------------------- 143
++DG L LK + KID G V T
Sbjct: 163 CEAVSCSNQGKIYLDGRQLILKFAADKIDHDQQMGVVQATPSGAERDKSVEMSTSSVGGG 222
Query: 144 -------NLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLG 196
+A + +S N + S+RK+FV N+ +++ L F YG ++E +
Sbjct: 223 GGGQTTGGVASSSDSANRGGTYSNQSMRKLFVYNLAPYTTSETLREVFGKYGPMDECIVV 282
Query: 197 FDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+D GK K +A Y E A A L +P KTVDG+ LA
Sbjct: 283 YDS-AGKSKRYAFVTYSNVEDAWACLEEPHKTVDGRMTFTHLA 324
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 198 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 257
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 258 EKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 312
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 313 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 371
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291410919|ref|XP_002721735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q R+LFI GL ++TT E LRS F +G L + +V+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|326435665|gb|EGD81235.1| RNA-binding protein Musashi-1 [Salpingoeca sp. ATCC 50818]
Length = 1023
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 12/187 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL +T + L+ FS +GE+ + VV+ D TG+++G+GF+TF+ L+E
Sbjct: 427 KMFVGGLSPETNRDRLKGYFSRFGEVVDCVVMTDATTGRTRGFGFVTFRDGRCCAKVLRE 486
Query: 132 PSKKIDGRVTVTNLAV-------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
IDGR +AV S ++ P S RK+FVG +P++ + + L+ F
Sbjct: 487 RPHIIDGREVDPKMAVPREQMEQHSRSSSAPAAPRGRSARKVFVGGLPSNATDEALIGFF 546
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+ +GEIEE + DKQT P+GF + + + + + + ++ L ++ + K+A
Sbjct: 547 SNFGEIEEAVVIHDKQTRLPRGFGFVTFVSEQ-----VAEHVVSLHYHDLLGKMVEVKRA 601
Query: 245 KPMGPDG 251
+P DG
Sbjct: 602 EPKATDG 608
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 49 AVARHDDVLESVRSIADADP---TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILD 105
AV R S S A A P + RK+F+ GL + T E L FS +GE+EEAVVI D
Sbjct: 501 AVPREQMEQHSRSSSAPAAPRGRSARKVFVGGLPSNATDEALIGFFSNFGEIEEAVVIHD 560
Query: 106 KATGKSKGYGFITF 119
K T +G+GF+TF
Sbjct: 561 KQTRLPRGFGFVTF 574
>gi|402864694|ref|XP_003896588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 320
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTEESLRSHFEQWGTLADCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDCFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|115473043|ref|NP_001060120.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|38175737|dbj|BAC55617.2| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa
Japonica Group]
gi|113611656|dbj|BAF22034.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|215695373|dbj|BAG90564.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 19/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T + LR FS +GE+ EAV++ D+ TG+++G+GF+ F
Sbjct: 7 KLFVGGISWETDEDRLREYFSRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVAERVTMD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D +T + N+G+S +P RKIFVG + ++++
Sbjct: 67 KHMIDGRMVEAKKAVPRDDQSIT------SKNNGSSIGSPGPGRTRKIFVGGLASNVTEV 120
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+ +F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 121 EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR 180
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 181 AVPKEQSP 188
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVLESVR---SIADADP-TQRKLFIRGLGWDTT 83
+ ER+T D+ ++D AV R D + S SI P RK+F+ GL + T
Sbjct: 59 VAERVTMDKHMIDGRMVEAKKAVPRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLASNVT 118
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 119 EVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEV 178
Query: 144 NLAV 147
AV
Sbjct: 179 KRAV 182
>gi|430813105|emb|CCJ29521.1| unnamed protein product [Pneumocystis jirovecii]
Length = 397
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 11/171 (6%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALKE 131
+FI GL W+TT E LR+ F +GE+ E V+ D +TG+S+G+GF+TFK + +KE
Sbjct: 1 MFIGGLNWETTDESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVKE 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ T K+FVG V D + D+ F+ +G +
Sbjct: 61 --HYLDGKIIDPKRAIPREEQEKT--------AKMFVGGVSQDCTEDEFREFFSAFGRVI 110
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+ L DK TG+P+GF +++ + A+ P + KQ+ + A K
Sbjct: 111 DATLMIDKDTGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQIEVKRATPK 161
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQR-KLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I + + K+F+ G+ D T
Sbjct: 45 LTFKDPKCVNTVMVKEHYLD---------GKIIDPKRAIPREEQEKTAKMFVGGVSQDCT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKI-DGRVTV 142
+ R FSA+G + +A +++DK TG+ +G+GF+TF+ A+ +P I D ++ V
Sbjct: 96 EDEFREFFSAFGRVIDATLMIDKDTGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQIEV 155
Query: 143 TNLAVAGNSGNSTN 156
GN N
Sbjct: 156 KRATPKGNIKERVN 169
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR F +GE+ + V+ D TG+S+G+GF+TFK+ + +
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK 223
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ T K+FVG VP D + ++ F +G +
Sbjct: 224 -EHHLDGKIIDPKRAIPREEQEKT--------AKMFVGGVPGDCTEEEFRNFFNQFGRVL 274
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ L DK TG+P+GF Y+ +A + P T+ GK + + A
Sbjct: 275 DATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRA 322
>gi|196010301|ref|XP_002115015.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
gi|190582398|gb|EDV22471.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
Length = 210
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T TE LR F YGE+ E V++ D T +S+G+GF+TF D L+
Sbjct: 5 KMFIGGLSWMTNTEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEKVLQS 64
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K+D + N+ + +K+FVG + + + + + +F +G+IE
Sbjct: 65 GPHKLDDK----NIDAKVAYPKKQRQKLVTRTKKVFVGGIATNTTTEDITKYFETFGQIE 120
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPM---- 247
+ L FDK T + +GF ++++ + A A V ++N + + KKA+P
Sbjct: 121 DAMLMFDKSTQRHRGFGFVIFESEDSADKAC-----EVHFHEINNKKVEVKKAQPKEVMH 175
Query: 248 GPDGGGPGNVSMNHGDGMGMVPPSA 272
G G++ NH G+ + S+
Sbjct: 176 SQTSGTKGHLKTNHNRGIRKLSCSS 200
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ G+ +TTTE + F +G++E+A+++ DK+T + +G+GF+ F+ D A A +
Sbjct: 93 KKVFVGGIATNTTTEDITKYFETFGQIEDAMLMFDKSTQRHRGFGFVIFESEDSADKACE 152
Query: 131 EPSKKIDGR 139
+I+ +
Sbjct: 153 VHFHEINNK 161
>gi|224114443|ref|XP_002316761.1| predicted protein [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ FS YGE+ EAV++ D+ATG+++G+GF+ F + A + E
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVIME 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV + + N +P +KIFVG + + ++ ++ +
Sbjct: 67 -KHVIDGRTVEAKKAVPRDDQHILSRSISNIHGSPGPGRTKKIFVGGLASTVTENEFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F YG I + + +D T +P+GF Y + E L ++GK + + A K+
Sbjct: 126 FEQYGIIIDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 14 AVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPT---- 69
V +DL R+ I+E+ D AV R D + S RSI++ +
Sbjct: 52 VVFADLTVAERV-------IMEKHVIDGRTVEAKKAVPRDDQHILS-RSISNIHGSPGPG 103
Query: 70 -QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
+K+F+ GL T + F YG + + VV+ D T + +G+GFIT+ +
Sbjct: 104 RTKKIFVGGLASTVTENEFKKYFEQYGIIIDVVVMYDHNTQRPRGFGFITYDSEEAVDRV 163
Query: 129 LKEPSKKIDGRVTVTNLAV 147
L + +++G++ AV
Sbjct: 164 LHKTFHELNGKMVEVKRAV 182
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F+ YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ +++ +DG+ + + A
Sbjct: 61 ERVIMEK-HVIDGRTVEAKKA 80
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR F +GE+ E V+ D TG+S+G+GF+TFK + + +
Sbjct: 109 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK 168
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + + +FA +G +
Sbjct: 169 -EHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFRDYFAQFGRVV 219
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ G +A + P++ + GK + K+A+P G
Sbjct: 220 DATLMMDKDTGRPRGFGFVTFESEAGVEACINVPLE-IHGKPVEV-----KRAQPRG 270
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ +TT
Sbjct: 154 LTFKDAKTVNIVMVKEHFLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQETT 204
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ R F+ +G + +A +++DK TG+ +G+GF+TF+ G + P
Sbjct: 205 DQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACINVP 253
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 131 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 190
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 191 EKVLKVPIHTLDGKKIDPKHATPKNRPRQANKT-----KKIFVGGVSQDTSAEEVKAYFS 245
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 246 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 304
>gi|326494758|dbj|BAJ94498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 494
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ G+ W+T + LR F +GE+ EAV++ D+ TG+++G+GFI F G +
Sbjct: 30 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEA-GVAERVTM 88
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR+ AV + N+G+S +P V RKIFVG + ++++ + +
Sbjct: 89 DKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVTEVEFRRY 148
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + + AL ++GK + + A K+
Sbjct: 149 FEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKE 208
Query: 244 AKP 246
P
Sbjct: 209 QSP 211
>gi|242047760|ref|XP_002461626.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
gi|241925003|gb|EER98147.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
Length = 453
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 24/218 (11%)
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
+E+ ++AD KLF+ G+ W+T+ + LR F +GE+ EAV++ D++TG+++G+GF
Sbjct: 1 MEAAAAVADYG----KLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGF 56
Query: 117 ITF------------KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL 163
+ F KH IDG M+ K+ + D + V+ ++ +S +P
Sbjct: 57 VVFADPAVAERVTMDKHMIDGRMVEAKKAVPRDDHSI------VSKSNASSIGSPGPGRT 110
Query: 164 RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALV 223
RKIFVG +P++++ +F +G I + + +D T +P+GF Y + + AL
Sbjct: 111 RKIFVGGLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALH 170
Query: 224 DPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNH 261
++GK + + A K+ P GP P V N+
Sbjct: 171 KSFHELNGKMVEVKRAVPKEQSP-GPVVRSPVGVGQNY 207
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 131/348 (37%), Gaps = 58/348 (16%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVLES---VRSIADADP-TQRKLFIRGLGWDTT 83
+ ER+T D+ ++D AV R D + S SI P RK+F+ GL + T
Sbjct: 64 VAERVTMDKHMIDGRMVEAKKAVPRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNVT 123
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 124 EADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEV 183
Query: 144 NLAV-------------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
AV G N N V L G PN + + YG +
Sbjct: 184 KRAVPKEQSPGPVVRSPVGVGQNYAMNRVHSFLNGFNQGYNPNPIGGYGMRVD-GRYGLL 242
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL--ADNKKAKPMG 248
GF G G + V G A I +G+Q+ + N+ PMG
Sbjct: 243 SGARNGF-SSFGPGYGMGMNVEGGMSGTFGASSGFISNSNGRQMGSYFNASSNRLGSPMG 301
Query: 249 PDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQV-- 306
G +N D G + S + G G YP P + +S G GQV
Sbjct: 302 YLG-------LN--DVPGSMLSSMSRNVWGNGSLNYP---SNPTNMNAFASPGNGGQVGI 349
Query: 307 --------PS-----SMGGVGAGGYGAG-----LGGPYGGYGGPGSTG 336
PS S+ +G+G G G G P G YG STG
Sbjct: 350 TGDSWGGLPSAHGMGSISSLGSGNLGRGAGDNTFGLPSGSYGRSNSTG 397
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 5/173 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G+L + VV+ D T +S+G+GF+T+ ++
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 82 DAAMSARPHKVDGRVVEPKRAVSRE--DSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFQ 139
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 140 SYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 190
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T+ + LR F +GE+ EAV++ D++TG+++G+GF+ F
Sbjct: 8 KLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTTE 67
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D + V ++ +S +P RKIFVG +P++++
Sbjct: 68 KHMIDGRMVEAKKAVPRDDHSI------VTKSNASSIGSPGPGRTRKIFVGGLPSNVTEA 121
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 122 DFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKR 181
Query: 239 ADNKKAKPMGPDGGGPGNVSMNH 261
A K+ P GP P V N+
Sbjct: 182 AVPKEQSP-GPAARSPVGVGQNY 203
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVL---ESVRSIADADP-TQRKLFIRGLGWDTT 83
+ ER+T+++ ++D AV R D + + SI P RK+F+ GL + T
Sbjct: 60 VAERVTTEKHMIDGRMVEAKKAVPRDDHSIVTKSNASSIGSPGPGRTRKIFVGGLPSNVT 119
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 120 EADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEV 179
Query: 144 NLAV 147
AV
Sbjct: 180 KRAV 183
>gi|402908392|ref|XP_003916927.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Papio anubis]
Length = 343
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 68 PTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 2 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVD 61
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 62 AAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFE 118
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 119 QYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 176
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT LR F YG++E ++ D+ +
Sbjct: 75 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGS 134
Query: 109 GKSKGYGFITFKHIDGAMLALKEPSKKIDG 138
GK +G+ F+TF D + + ++G
Sbjct: 135 GKKRGFAFVTFDDHDSVDKIVIQKYHTVNG 164
>gi|326525423|dbj|BAJ88758.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ G+ W+T + LR F +GE+ EAV++ D+ TG+++G+GFI F G +
Sbjct: 7 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEA-GVAERVTM 65
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR+ AV + N+G+S +P V RKIFVG + ++++ + +
Sbjct: 66 DKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVTEVEFRRY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + + AL ++GK + + A K+
Sbjct: 126 FEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 QSP 188
>gi|133258|sp|P17130.1|ROA1_XENLA RecName: Full=Heterogeneous nuclear ribonucleoproteins A1 homolog;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|214239|gb|AAA49741.1| ribonucleoprotein A1a [Xenopus laevis]
Length = 365
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S A +P Q RKLFI GL ++TT E LR F +G L + VV+ D + +S+G+GF+T+
Sbjct: 3 KSEAPNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADK 179
D A+ K+DGRV AV+ +S+ ++++KIFVG + D D
Sbjct: 63 LSTDEVDAAMTARPHKVDGRVVEPKRAVSRE--DSSRPGAHLTVKKIFVGGIKEDTEEDH 120
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L +F YG+IE + D+ +GK +GFA ++ + ++ TV+ R A
Sbjct: 121 LREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKA 180
Query: 240 DNKK 243
+K+
Sbjct: 181 LSKQ 184
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLA 128
K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+DG++ A+ + T+ KIFVG V + + F +G
Sbjct: 172 ----EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEQDFKQFFMQFG 219
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 220 RVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEV-----KKAQPRG 273
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +
Sbjct: 157 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAN 207
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF AL P + + + V
Sbjct: 208 EQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVK 267
Query: 144 NLAVAGN 150
GN
Sbjct: 268 KAQPRGN 274
>gi|444513904|gb|ELV10489.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Tupaia
chinensis]
Length = 432
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 4 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 63
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 64 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 120
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 121 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 179
>gi|47939618|gb|AAH71945.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F +G+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQFGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|58331869|ref|NP_001011094.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
gi|54038494|gb|AAH84487.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR F +G L + VV+ D + +S+G+GF+T+ D
Sbjct: 6 EPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSTDEV 65
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S+ ++++KIFVG + D L +F
Sbjct: 66 DAAMSARPHKVDGRVVEPKRAVSRE--DSSRPGAHLTVKKIFVGGIKEDTEEHHLREYFE 123
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA ++ + ++ TV+ R A +K+
Sbjct: 124 QYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNCEVRKALSKQ 181
>gi|297823133|ref|XP_002879449.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
gi|297325288|gb|EFH55708.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 15/190 (7%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML-A 128
Q KLFI G+ WDT LR FS +GE+ + V+ +KATG+ +G+GF+ F D A++
Sbjct: 5 QGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFS--DPAVIDR 62
Query: 129 LKEPSKKIDGRVTVTNLAV-------AGNSGN-----STNNPVDVSLRKIFVGNVPNDMS 176
+ + ID R A+ AG SGN + ++ +V +KIFVG +P ++
Sbjct: 63 VLQDKHHIDNRDVDVKRAMSREEQSPAGRSGNFNASRNFDSGANVRTKKIFVGGLPPALT 122
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
+D+ A+F YG + + + D+ T +P+GF + + + L ++GKQ+
Sbjct: 123 SDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEV 182
Query: 237 RLADNKKAKP 246
+ A K A P
Sbjct: 183 KRALPKDANP 192
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
A+ +K+F+ GL T++ R+ F YG + +AV+++D+ T + +G+GF++F D
Sbjct: 105 ANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSV 164
Query: 126 MLALKEPSKKIDGRVTVTNLAV 147
L L + ++G+ A+
Sbjct: 165 DLVLHKTFHDLNGKQVEVKRAL 186
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 118/279 (42%), Gaps = 58/279 (20%)
Query: 52 RHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKS 111
R R + +D +Q KLF+ G+ W+TT E S FS +GE+ ++V++ D+ +G+
Sbjct: 60 RQSLTFNQTRDNSSSDSSQGKLFVGGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRP 119
Query: 112 KGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
+G+GF+TF + A L+E ID R V V RKIFVG +
Sbjct: 120 RGFGFVTFADLAAADRVLEE-DHIIDDRAVEVKRTVPREEMEVKGV---VRARKIFVGGI 175
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P ++ D+L +F+ YG I E + D +TG+ +GF ++T + + T
Sbjct: 176 PPTLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIF----STGRT 231
Query: 232 KQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPP 291
+L + + KKA VP GG YG G + FS
Sbjct: 232 HELGGKRVEIKKA-----------------------VPKRNGGDYGSSGKYHTGFSN--- 265
Query: 292 LGHHLNSSLGGPGQVPSSMGGVGAGGYGAGL--GGPYGG 328
GAGGYGAG GG YGG
Sbjct: 266 ----------------------GAGGYGAGHNSGGLYGG 282
>gi|114577985|ref|XP_001144332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
Length = 320
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLF GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFFGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|47228652|emb|CAG07384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 323
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D ++ +S+G+GF+T+ +D
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVDEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
LA+ K+DGRV AV S +N P V+++KIFVG + D + +F
Sbjct: 68 DLAMGARPHKVDGRVVEPKRAV---SREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G+IE + D+ +GK +GFA + + ++ T++ NC +
Sbjct: 125 ERFGKIEIIDIIADRNSGKKRGFAFVTFDDHDPVDRIVIQKYHTINSH--NCEVRKALTR 182
Query: 245 KPMGPDGGGPG 255
+ M G G G
Sbjct: 183 QEMQTTGVGMG 193
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT +R F +G++E +I D+ +
Sbjct: 82 VVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIIADRNS 141
Query: 109 GKSKGYGFITFKHID 123
GK +G+ F+TF D
Sbjct: 142 GKKRGFAFVTFDDHD 156
>gi|148237229|ref|NP_001080689.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus laevis]
gi|28374304|gb|AAH45260.1| Hnrpa1 protein [Xenopus laevis]
Length = 399
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 3/184 (1%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S A +P Q RKLFI GL ++TT E LR F +G L + VV+ D + +S+G+GF+T+
Sbjct: 3 KSEAPKEPEQLRKLFIGGLSFETTDESLREHFEQWGALTDCVVMRDPNSKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADK 179
D A+ K+DGRV AV+ +S+ ++++KIFVG + D
Sbjct: 63 SSTDEVDAAMTARPHKVDGRVVEPKRAVSRE--DSSRPGAHLTVKKIFVGGIKEDTEEHH 120
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L +F YG+IE + D+ +GK +GFA ++ + ++ TV+ R A
Sbjct: 121 LREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNCEVRKA 180
Query: 240 DNKK 243
+K+
Sbjct: 181 LSKQ 184
>gi|348521586|ref|XP_003448307.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oreochromis niloticus]
Length = 332
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D + +S+G+GF+T+ +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S +N P ++++KIFVG + D L +F
Sbjct: 69 DAAMSARPHKVDGRVVEPKRAV---SREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+G+IE + D+ TGK +GFA + + ++ T++ R A K+
Sbjct: 126 QQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKALTKQ 184
>gi|291389273|ref|XP_002711072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK + FA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR FS +GE+ E V+ D ATG+S+G+GF+TFK + + +
Sbjct: 123 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK 182
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + + +FA +G +
Sbjct: 183 -EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDHEFREYFAQFGRVV 233
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ G +A L ++ + GK + KKA+P G
Sbjct: 234 DATLMMDKDTGRPRGFGFVTFESEAGVEACLAAKLE-IHGKPIEV-----KKAQPRG 284
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ +TT R F+ +G + +A +++DK TG+ +G+
Sbjct: 190 IIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGF 249
Query: 115 GFITFKHIDGAMLAL 129
GF+TF+ G L
Sbjct: 250 GFVTFESEAGVEACL 264
>gi|195624752|gb|ACG34206.1| RNA-binding protein [Zea mays]
Length = 469
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 30/265 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T + LR F +GE+ EAV++ D++TG+++G+GF+ F
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D + V+ ++ +S +P RKIFVG +P++++
Sbjct: 69 KHMIDGRMVEAKKAVPRDDHSI------VSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEA 122
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 123 DFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKK 182
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNS 298
A K+ P GP P V N+ M V S+ GY P P+G +
Sbjct: 183 AVPKEQSP-GPVARSPAGVGQNY--AMNRVH-----SFLNDFNQGY---NPNPIGGYGMR 231
Query: 299 SLGGPGQVPSSMGGVGAGGYGAGLG 323
G GQ+ + G+ + G G G+G
Sbjct: 232 VDGRFGQLSGARNGLSSFGPGYGMG 256
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLES---VRSIADADP-TQRKLFIRGLGWDTTTEG 86
R +E+ D + AV R D + S SI P RK+F+ GL + T
Sbjct: 64 RVTIEKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEAD 123
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++ A
Sbjct: 124 FRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKA 183
Query: 147 V 147
V
Sbjct: 184 V 184
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 31/290 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR+ FS YGE+ + V++ DK T +S+G+GF+ FK + L+
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 132 PSKKIDGR---------------VTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
+DGR + T G+ +S + +KIFVG +P++
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKS------KKIFVGGIPHNCG 125
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
+L +F +G + E + +D + +P+GF ++ + A+ + GK++
Sbjct: 126 EPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEV 185
Query: 237 RLADNKKAK---PMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLG 293
+ A+ + +K +GP P + ++ +G P GP G +G P G
Sbjct: 186 KKAEPRDSKAPGQLGPGQWAPRAI-LSAANGWTAQPAQGWQQAYGPQGVWVSATGQPIAG 244
Query: 294 H--HLNSSLGGPGQVPSSMGG----VGAGGYGAGLGGPYGGYGGPGSTGY 337
+ L++ G P Q PS AG + A G P GY GY
Sbjct: 245 YGPPLSAGRGTPTQPPSPFNAFLVTTPAGSFAAPQGYPQQGYTTAPQFGY 294
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S AD++ + +K+F+ G+ + LR F+ +G + E V+I D + +G+GFITF+
Sbjct: 105 SKADSNKS-KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 162
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 156 NNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTA 215
NN V + K+FVG + + + L +F+ YGE+ + + DK T + +GF +K
Sbjct: 3 NNLVGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDP 62
Query: 216 EGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
+ L +DG+ ++ KP P G P G
Sbjct: 63 NCVRTVLETKPHNLDGRNID--------PKPCTPRGMQPEKSRTKEG 101
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T++E L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 181 SDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 240
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 241 DKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 295
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 296 QFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 354
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 15/178 (8%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+FI GL W+TT E LR+ FS +GE+ E V+ D ATG+S+G+GF+TFK + +
Sbjct: 225 KKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIVMV 284
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ +DG++ A+ + T+ KIFVG V + + + +F+ +G +
Sbjct: 285 K-EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSPETTDHEFREYFSQFGRV 335
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ G +A L + +L+ + + KKA+P G
Sbjct: 336 VDATLMMDKDTGRPRGFGFVTFESEAGVEACLNAKL------ELHGKPIEVKKAQPRG 387
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ +TT R FS +G + +A +++DK TG+ +G+
Sbjct: 293 IIDPKRAIPRDEQEKTSKIFVGGVSPETTDHEFREYFSQFGRVVDATLMMDKDTGRPRGF 352
Query: 115 GFITFKHIDGAMLAL 129
GF+TF+ G L
Sbjct: 353 GFVTFESEAGVEACL 367
>gi|219363315|ref|NP_001136724.1| uncharacterized protein LOC100216861 [Zea mays]
gi|194696774|gb|ACF82471.1| unknown [Zea mays]
gi|414883906|tpg|DAA59920.1| TPA: RNA-binding protein [Zea mays]
Length = 469
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 30/265 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T + LR F +GE+ EAV++ D++TG+++G+GF+ F
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D + V+ ++ +S +P RKIFVG +P++++
Sbjct: 69 KHMIDGRMVEAKKAVPRDDHSI------VSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEA 122
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 123 DFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKK 182
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNS 298
A K+ P GP P V N+ M V S+ GY P P+G +
Sbjct: 183 AVPKEQSP-GPVARSPAGVGQNY--AMNRVH-----SFLNDFNQGY---NPNPIGGYGMR 231
Query: 299 SLGGPGQVPSSMGGVGAGGYGAGLG 323
G GQ+ + G+ + G G G+G
Sbjct: 232 VDGRFGQLSGARNGLSSFGPGYGMG 256
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLES---VRSIADADP-TQRKLFIRGLGWDTTTEG 86
R +E+ D + AV R D + S SI P RK+F+ GL + T
Sbjct: 64 RVTIEKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEAD 123
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++ A
Sbjct: 124 FRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKA 183
Query: 147 V 147
V
Sbjct: 184 V 184
>gi|410921768|ref|XP_003974355.1| PREDICTED: DAZ-associated protein 1-like [Takifugu rubripes]
Length = 435
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 33/291 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR+ FS YGE+ + V++ DK T +S+G+GF+ FK + L+
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 132 PSKKIDGR---------------VTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
+DGR + T G+ +S + +KIFVG +P++
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKS------KKIFVGGIPHNCG 125
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
+L +F +G + E + +D + +P+GF ++ + A+ + GK++
Sbjct: 126 EPELRDYFNRFGAVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEV 185
Query: 237 RLADNKKAKPMGPDGGGPGNVS----MNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPL 292
+ A+ + +K P GPG + + +G P GP G +G P
Sbjct: 186 KKAEPRDSK--APGQLGPGQWAPRGILTAANGWTTQPAQGWQQPYGPQGVWVSTTGQPIG 243
Query: 293 GH--HLNSSLGGPGQVPSSMGG----VGAGGYGAGLGGPYGGYGGPGSTGY 337
G+ L++ G P Q PS AGG+ A G P GY GY
Sbjct: 244 GYGPPLSAGRGTPTQPPSPFSAFLVTTPAGGFTAPQGYPQQGYSTAPQFGY 294
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S AD++ + +K+F+ G+ + LR F+ +G + E V+I D + +G+GFITF+
Sbjct: 105 SKADSNKS-KKIFVGGIPHNCGEPELRDYFNRFGAVTEVVMIYDAEKQRPRGFGFITFE 162
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 156 NNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTA 215
NN V + K+FVG + + + L +F+ YGE+ + + DK T + +GF +K
Sbjct: 3 NNLVGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDP 62
Query: 216 EGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
+ L +DG+ ++ KP P G P G
Sbjct: 63 NCVRTVLETKPHNLDGRNID--------PKPCTPRGMQPEKSRTKEG 101
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR F+ +GE+ E V+ D +TG+S+G+GF+TFK + + +
Sbjct: 121 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK 180
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + + +FA +G +
Sbjct: 181 -EHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKEYFAQFGRVV 231
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF ++ G A + P++ + GK + KKA+P G
Sbjct: 232 DATLMMDKDTGRPRGFGFVTFENEAGVDACINVPLE-IHGKPIEV-----KKAQPRG 282
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ +TT
Sbjct: 166 LTFKDAKTVNIVMVKEHFLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQETT 216
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ + F+ +G + +A +++DK TG+ +G+GF+TF++ G + P
Sbjct: 217 DQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINVP 265
>gi|302914266|ref|XP_003051103.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
gi|256732041|gb|EEU45390.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
Length = 546
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 23/212 (10%)
Query: 47 SSAVARHDDV--------LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELE 98
+S VA HDDV + + D K+FI GL W+TT + LR FS +GE+
Sbjct: 88 TSQVATHDDVPTPPPYGTVHKASAKEDG-----KMFIGGLNWETTDQSLRDYFSQFGEVV 142
Query: 99 EAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP 158
E V+ D +TG+S+G+GF+TFK + + + +DG++ L + P
Sbjct: 143 ECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK-EHFLDGKIVSYRL-IPQQIDPKRAIP 200
Query: 159 VDVSLR--KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAE 216
D + KIFVG V + + + +FA +G + + L DK TG+P+GF +++
Sbjct: 201 RDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEA 260
Query: 217 GAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
G A + P++ + GK + KKA+P G
Sbjct: 261 GVDACINVPLE-IHGKPIEV-----KKAQPRG 286
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 31/290 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR+ FS YGE+ + V++ DK T +S+G+GF+ FK + L+
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 132 PSKKIDGR---------------VTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
+DGR + T G+ +S + +KIFVG +P++
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKS------KKIFVGGIPHNCG 125
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
+L +F +G + E + +D + +P+GF ++ + A+ + GK++
Sbjct: 126 EPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEV 185
Query: 237 RLADNKKAK---PMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLG 293
+ A+ + +K +GP P + ++ +G P GP G +G P G
Sbjct: 186 KKAEPRDSKAPGQLGPGQWAPRAI-LSAANGWTAQPAQGWQQAYGPQGVWVSATGQPIAG 244
Query: 294 H--HLNSSLGGPGQVPSSMGG----VGAGGYGAGLGGPYGGYGGPGSTGY 337
+ L++ G P Q PS AG + A G P GY GY
Sbjct: 245 YGPPLSAGRGTPTQPPSPFNAFLVTTPAGSFAAPQGYPQQGYTTAPQFGY 294
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S AD++ + +K+F+ G+ + LR F+ +G + E V+I D + +G+GFITF+
Sbjct: 105 SKADSNKS-KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 162
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 156 NNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTA 215
NN V + K+FVG + + + L +F+ YGE+ + + DK T + +GF +K
Sbjct: 3 NNLVGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDP 62
Query: 216 EGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
+ L +DG+ ++ KP P G P G
Sbjct: 63 NCVRTVLETKPHNLDGRNID--------PKPCTPRGMQPEKSRTKEG 101
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Ovis aries]
Length = 319
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Ovis aries]
Length = 310
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|432865306|ref|XP_004070518.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oryzias latipes]
Length = 329
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D + +S+G+GF+T+ +
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S +N P ++++KIFVG + D L +F
Sbjct: 68 DAAMSARPHKVDGRVVEPKRAV---SREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+G+IE + D+ TGK +GFA + + ++ T++ R A K+
Sbjct: 125 QQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKALTKQ 183
>gi|119597384|gb|EAW76978.1| hCG2023776 [Homo sapiens]
Length = 317
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T S+G+GF+T+ ++
Sbjct: 9 EPKQLRKLFIGGLSFETTNESLRSHFEQWGTLMDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV + AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVESKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTKEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHICEVRKALSKQ 184
>gi|291393060|ref|XP_002713026.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+ +GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ +A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDVAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEER 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK KGFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT E LR F +GE+ + V+ D TG+S+G+GF+TFK + + +
Sbjct: 121 KMFIGGLNWETTDESLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPKCVQVVMSK 180
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ T K+FVG VP D + ++ F +G +
Sbjct: 181 -EHHLDGKIIDPKRAIPREEQEKTA--------KMFVGGVPADCTEEEFRDFFNQFGRVL 231
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ L DK TG+P+GF ++ + + P T+ GK + + A
Sbjct: 232 DATLMMDKDTGRPRGFGFVTFENEAAVENTMSQPYITIHGKPVEVKRA 279
>gi|444509540|gb|ELV09335.1| DAZ-associated protein 1, partial [Tupaia chinensis]
Length = 391
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DGR S NS +N KIFVG +P++ +L +F +G +
Sbjct: 61 RPHTLDGRNQ-----KGPRSDNSKSN-------KIFVGGIPHNCGETELREYFKKFGVVT 108
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDG 251
E + +D + +P+GF ++ + A+ + GK++ + A+ + +K P
Sbjct: 109 EVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAP-- 166
Query: 252 GGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
G PG G +VP +A G G P
Sbjct: 167 GQPGASQW----GSRVVPSAANGWAGQP 190
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
+RKLF+ GL W+TT E R F +GE+ +++ D T +S+G+GFI ++++ AL
Sbjct: 2 ERKLFVGGLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKAL 61
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+ IDG+ +V + +KIF+G +P + S + L +F YG
Sbjct: 62 LHATHVIDGKQVEPKRSVPREQTRT---------KKIFIGGLPPNTSDEDLKIYFGKYGV 112
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ E L DK+TG+ +GF + T EGAQ ALV + ++GK +A KKA+P
Sbjct: 113 VSEVELLRDKETGRLRGFGFVSFDTPEGAQKALVTKMHEINGK-----MAQVKKAEP 164
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
+E RS+ +K+FI GL +T+ E L+ F YG + E ++ DK TG+ +G+GF
Sbjct: 73 VEPKRSVPREQTRTKKIFIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDKETGRLRGFGF 132
Query: 117 ITFKHIDGAMLALKEPSKKIDGRV 140
++F +GA AL +I+G++
Sbjct: 133 VSFDTPEGAQKALVTKMHEINGKM 156
>gi|242043256|ref|XP_002459499.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
gi|241922876|gb|EER96020.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
Length = 455
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T+ + LR F +GE+ EAV++ D++TG+++G+GF+ F
Sbjct: 14 KLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADPAVAERVTMD 73
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D + V+ ++ +S +P RKIFVG +P++++
Sbjct: 74 KHMIDGRMVEAKKAVPRDDHSI------VSKSNASSIGSPGPGRTRKIFVGGLPSNVTEA 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 128 DFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNH 261
A K+ P GP P V N+
Sbjct: 188 AVPKEQSP-GPVVRSPVGVGQNY 209
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 130/348 (37%), Gaps = 58/348 (16%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVLES---VRSIADADP-TQRKLFIRGLGWDTT 83
+ ER+T D+ ++D AV R D + S SI P RK+F+ GL + T
Sbjct: 66 VAERVTMDKHMIDGRMVEAKKAVPRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNVT 125
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 126 EADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEV 185
Query: 144 NLAV-------------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
AV G N N V L G PN + + YG +
Sbjct: 186 KRAVPKEQSPGPVVRSPVGVGQNYAMNRVHSFLNGFNQGYNPNPIGGYGMRVD-GRYGLL 244
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL--ADNKKAKPMG 248
GF G G + V G A I +G+Q+ + N+ PMG
Sbjct: 245 SGARNGF-SSFGPGYGMGMNVEGGMSGTFGASSGFISNSNGRQMGSYFNASSNRLGSPMG 303
Query: 249 PDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQV-- 306
G +N D G + S + G G YP P SS G GQV
Sbjct: 304 YLG-------LN--DVPGSMLSSMSRNVWGNGSLNYP---SNPTNMSAFSSPGNGGQVGI 351
Query: 307 --------PS-----SMGGVGAGGYGAG-----LGGPYGGYGGPGSTG 336
PS S+ +G+G G G G P G YG STG
Sbjct: 352 TGDSWGGLPSAHGMGSISSLGSGNLGRGAGDNTFGLPSGSYGRSNSTG 399
>gi|115486383|ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|108864610|gb|ABA94921.2| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645557|dbj|BAF28698.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|215697828|dbj|BAG92021.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740693|dbj|BAG97349.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 467
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 19/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT + LR F YGE+ EAV++ D+ATG+++G+GFI F
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D A++ + G++ +P +KIFVG + + ++
Sbjct: 67 KHMIDGRMVEAKKAVPRDDQH------ALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEA 120
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 121 DFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 180
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 181 AVPKELSP 188
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDD-VLESVRSIADADP---TQRKLFIRGLGWDTTTEG 86
R I+E+ D + AV R D L A P +K+F+ GL T
Sbjct: 62 RVIMEKHMIDGRMVEAKKAVPRDDQHALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEAD 121
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++ A
Sbjct: 122 FRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRA 181
Query: 147 V 147
V
Sbjct: 182 V 182
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 4/174 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++ A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K+DGRV AV S + P ++++KIFVG + D L +F YG+
Sbjct: 74 ARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGK 130
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQ 184
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT LR F YG++E ++ D+ +
Sbjct: 83 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGS 142
Query: 109 GKSKGYGFITFKHID 123
GK +G+ F+TF D
Sbjct: 143 GKKRGFAFVTFDDHD 157
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
LRK+F+G + + + + L +HF +G + + + D T + +GF Y T E AA
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 222 LVDPIKTVDGK 232
+ VDG+
Sbjct: 72 MNARPHKVDGR 82
>gi|426241336|ref|XP_004014547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKGSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 12/183 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML-ALK 130
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF D ++L +
Sbjct: 100 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFS--DPSVLDRVL 157
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
E + IDGR V +S + P +KIFVG +P+ ++ DKL HF+ YG++
Sbjct: 158 EDAHVIDGRTVEVKRTVPKEEMSSKDGP---KTKKIFVGGIPSSLTEDKLKEHFSSYGKV 214
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKKAKPMGP 249
E + D TG+ +GF +++ + + + + + + GKQ+ KKA+P P
Sbjct: 215 VEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEI-----KKAEPKKP 269
Query: 250 DGG 252
GG
Sbjct: 270 GGG 272
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P +K+F+ G+ T + L+ FS+YG++ E ++LD +TG+S+G+GF+TF+ D
Sbjct: 185 PKTKKIFVGGIPSSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVER 244
Query: 128 ALKE 131
+ E
Sbjct: 245 VMSE 248
>gi|119193228|ref|XP_001247220.1| hypothetical protein CIMG_00991 [Coccidioides immitis RS]
Length = 506
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALK 130
K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK + +K
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 70
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
E +DG++ A+ + T+ KIFVG V D + F +G +
Sbjct: 71 E--HYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQDANEQDFKKFFMQFGRV 120
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 121 VDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEV-----KKAQPRG 172
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ D
Sbjct: 56 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQERTSKIFVGGVSQDAN 106
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF L +P + + + V
Sbjct: 107 EQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVK 166
Query: 144 NLAVAGN 150
GN
Sbjct: 167 KAQPRGN 173
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 9/177 (5%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK
Sbjct: 209 PELRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASVDK 268
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACY 187
L + ++DGRV A+A +PV +KIFVG + + + DK+ +F +
Sbjct: 269 VLDQKEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEDKIRDYFGEF 319
Query: 188 GEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
GEIE L D +T K +GF +K E + L V G + ++A K+
Sbjct: 320 GEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIKVAQPKEV 376
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T + +R F +GE+E +
Sbjct: 269 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEDKIRDYFGEFGEIEAIELP 328
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D T K +G+ FITFK +EP KKI
Sbjct: 329 MDPKTNKRRGFVFITFKE--------EEPVKKI 353
>gi|322711386|gb|EFZ02959.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium
anisopliae ARSEF 23]
Length = 517
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR F +GE+ E V+ D TG+S+G+GF+TFK + + +
Sbjct: 113 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK 172
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + + +FA +G +
Sbjct: 173 -EHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFRDYFAQFGRVV 223
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ G +A + P++ + GK + K+A+P G
Sbjct: 224 DATLMMDKDTGRPRGFGFVTFESEAGVEACINVPLE-IHGKPVEV-----KRAQPRG 274
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ +TT
Sbjct: 158 LTFKDAKTVNIVMVKEHFLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQETT 208
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ R F+ +G + +A +++DK TG+ +G+GF+TF+ G + P
Sbjct: 209 DQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACINVP 257
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 180 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 237
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V +S + P RKIFVG +P+ ++ D+L HF+ YG
Sbjct: 238 --EDEHVIDGRTVEVKRTVPREEMSSKDGP---KTRKIFVGGLPSSLTEDELREHFSPYG 292
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+I E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 293 KIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 348
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ GL T + LR FS YG++ E ++LD +TG+S+G+GF+TF+ D
Sbjct: 265 PKTRKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVER 324
Query: 128 ALKE 131
+ E
Sbjct: 325 VISE 328
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP KLF+ GL W T++E LR F+ +G + + +++ D T +S+G+GFITF
Sbjct: 36 DPAPGKLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVD 95
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
LK P +DG+ A N N +KIFVG V D S+D++ A+F
Sbjct: 96 KVLKCPIHTLDGKKIDPKHATPKNRAKQANRT-----KKIFVGGVSQDTSSDEVKAYFNQ 150
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 151 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 208
>gi|255574941|ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLFI G+ W+TT + L+ F YG++ + VV+ DK TG+ +G+GF+ F
Sbjct: 2 DSDQGKLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVTVT--NLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
KH IDG + K+ + + + NL NSG+ N + +KIFVG +
Sbjct: 62 RVLQDKHTIDGRTVEAKKALSREEQQTNARSGNLNPPRNSGSGGN----IRTKKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P ++ D+ +F YG + + + +D+ T +P+GF + + L ++G
Sbjct: 118 PPALTDDEFRQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTFHDLNG 177
Query: 232 KQLNCRLADNKKAKP 246
KQ+ + A K A P
Sbjct: 178 KQVEVKRALPKDANP 192
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+D K+F+G + + + DKL +F YG++ + + DK TG+P+GF V+
Sbjct: 1 MDSDQGKLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNIL 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAK 245
L D T+DG+ + + A +++ +
Sbjct: 61 DRVLQDK-HTIDGRTVEAKKALSREEQ 86
>gi|76780030|gb|AAI06633.1| MGC52881 protein [Xenopus laevis]
Length = 346
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF ++ A+
Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGRV AVA S V+++K+FVG + D L +F YG+I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREE--SAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKI 126
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + DKQ+GK +GF + + ++ T++G R A +K+
Sbjct: 127 ESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG++E +I DK +
Sbjct: 78 VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFNDHD 152
>gi|345564567|gb|EGX47528.1| hypothetical protein AOL_s00083g337 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 88/179 (49%), Gaps = 18/179 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT E LR FS +GE+ E V+ D +G+S+G+GF+TFK + + +
Sbjct: 159 KMFIGGLNWETTDESLRDYFSQFGEVSECTVMRDGPSGRSRGFGFLTFKDPKTVNIVMVK 218
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ P D R KIFVG V + S ++ F +G
Sbjct: 219 -EHYLDGKIIDPKRAI----------PRDEQERTSKIFVGGVSQEASEEEFKNFFMQFGR 267
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK+TG+P+GF + AL P + K + KKA+P G
Sbjct: 268 VIDSTLMIDKETGRPRGFGFVTFDNEAAVDLALQHPDLRIRDKPIEV-----KKAQPRG 321
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ + + E ++ F +G + ++ +++DK TG+ +G+
Sbjct: 226 IIDPKRAIPRDEQERTSKIFVGGVSQEASEEEFKNFFMQFGRVIDSTLMIDKETGRPRGF 285
Query: 115 GFITFKHIDGAMLALKEPSKKI-DGRVTVTNLAVAGNS 151
GF+TF + LAL+ P +I D + V GN+
Sbjct: 286 GFVTFDNEAAVDLALQHPDLRIRDKPIEVKKAQPRGNA 323
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 205 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTV 264
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+FA
Sbjct: 265 EKVLKVPIHTLDGKKIDPKHATPKNRPRQANK-----TKKIFVGGVSQDTSAEEVKAYFA 319
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K++
Sbjct: 320 QFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKES 378
>gi|402887374|ref|XP_003907069.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402887376|ref|XP_003907070.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++T E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPKQLRKLFIGGLSFETIDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKTAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVNEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|449447863|ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220676 [Cucumis sativus]
gi|449525968|ref|XP_004169988.1| PREDICTED: uncharacterized LOC101220676 [Cucumis sativus]
Length = 700
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 142/310 (45%), Gaps = 34/310 (10%)
Query: 57 LESVRSIADADPTQR------KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGK 110
++S RS TQ KLF+ G+ W+TT + R FS YGE+ ++V+++DK TG+
Sbjct: 403 VDSTRSEIKNSTTQYDSSSSGKLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGR 462
Query: 111 SKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGN 170
+G+GF+TF A + LK IDGR V N+ + +KIFVG
Sbjct: 463 PRGFGFVTFCDPAIADMVLK-IDHIIDGRAVEVKRTVP---RADMNDKMVSRTKKIFVGG 518
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALV-DPIKTV 229
+P ++ ++ +F+ +G I E + D +T + +GF ++ + + D I +
Sbjct: 519 IPPGLTEEEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHEL 578
Query: 230 DGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGP 289
GKQ+ + A K+ + + N G G GG Y G + GP
Sbjct: 579 GGKQVEIKKAVPKRV---------AYDFNSNSGQTSGYDMYRCGGLYDDIIGTDF---GP 626
Query: 290 PPLGHHLNSSLGGPGQVPSSMGGVGAGGYGAG----LGGPYG--GYGGPGSTGYGGLGGA 343
+ L + GG G +S G G+G G + G YG GYG P S GYG G
Sbjct: 627 ----YDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRYGMNGYGTP-SVGYGINGYG 681
Query: 344 GGGAGAGGAL 353
G G GG++
Sbjct: 682 KGYEGNGGSM 691
>gi|296194380|ref|XP_002744925.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++ A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
K+DGRV AV+ +S ++++KIFVG + D L +F YG+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSRE--DSQRQGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + D+ +GK + FA + + ++ TV+G R A +K+
Sbjct: 132 EVTEIMTDRGSGKKRSFAFVTFDDHDTVDKIVIQKYHTVNGHNCEVRKALSKQ 184
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT LR F YG++E ++ D+ +
Sbjct: 83 VVEPKRAVSREDSQRQGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTEIMTDRGS 142
Query: 109 GKSKGYGFITF 119
GK + + F+TF
Sbjct: 143 GKKRSFAFVTF 153
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
LRK+F+G + + + + L +HF +G + + + D T + +GF Y T E AA+
Sbjct: 13 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 72
Query: 223 VDPIKTVDGK 232
VDG+
Sbjct: 73 NARPHKVDGR 82
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ F ++GE+ EAV++ D+ TG+++G+GF+ F A +KE
Sbjct: 7 KLFIGGISWDTNEERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAERVIKE 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTN-NPVDVSLRKIFVGNVPNDMSADKLLA 182
IDGR+ AV + NSG S + +P +KIFVG + + ++
Sbjct: 67 K-HSIDGRMVEAKKAVPRDDQNMLSRNSGGSIHGSPGPGRTKKIFVGGLASTVTESDFRK 125
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G I + + +D T +P+GF Y + E L+ ++GK + + A K
Sbjct: 126 YFDQFGLITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAVPK 185
Query: 243 KAKP 246
+ P
Sbjct: 186 ELSP 189
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPT-----QRKLFIRGLGWDTTTE 85
R I E+ + D + AV R D + S S + +K+F+ GL T
Sbjct: 62 RVIKEKHSIDGRMVEAKKAVPRDDQNMLSRNSGGSIHGSPGPGRTKKIFVGGLASTVTES 121
Query: 86 GLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNL 145
R F +G + + VV+ D T + +G+GFIT+ + L + +++G++
Sbjct: 122 DFRKYFDQFGLITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKR 181
Query: 146 AV 147
AV
Sbjct: 182 AV 183
>gi|148233568|ref|NP_001079471.1| heterogeneous nuclear ribonucleoprotein A2 homolog 2 [Xenopus
laevis]
gi|1710624|sp|P51990.1|RO22_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 2;
AltName: Full=hnRNP A2(B)
gi|214743|gb|AAB59951.1| ribonucleoprotein [Xenopus laevis]
gi|27694622|gb|AAH43750.1| MGC52881 protein [Xenopus laevis]
Length = 358
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF ++ A+
Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGRV AVA S V+++K+FVG + D L +F YG+I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREE--SAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKI 126
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + DKQ+GK +GF + + ++ T++G R A +K+
Sbjct: 127 ESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG++E +I DK +
Sbjct: 78 VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFNDHD 152
>gi|109131409|ref|XP_001082949.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Macaca mulatta]
gi|297304279|ref|XP_001082690.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Macaca mulatta]
Length = 320
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ V+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHPVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|209879389|ref|XP_002141135.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556741|gb|EEA06786.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 408
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 114/221 (51%), Gaps = 21/221 (9%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSI 90
+ I+ L+ +QL+D+L+ D+V ++ +I + P R++ +R + ++T+ + +
Sbjct: 40 KHILFPLSKEQLVDILARCAFAFDEVRKACVAIFEKSPVSRRVMVRNISFNTSDKAFVDL 99
Query: 91 FSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV--- 147
F +GE+++A+++ DK+ GKS+GYGF+TFK + ++ L + S +DGR + LA
Sbjct: 100 FCTFGEIDDAIIVRDKS-GKSRGYGFVTFKSTE-SIHKLFDSSLCLDGRQLLLKLAADPY 157
Query: 148 ---------------AGNSGNSTNNPVDV-SLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
N N +N V S RK+FV N+ + +A+KL F+ +G +E
Sbjct: 158 AEFTCGRSQSPKDLYERNDINDSNTSFKVISKRKLFVRNLSDTTTAEKLKEVFSQFGNVE 217
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
+ + D TG K +K G AL + ++GK
Sbjct: 218 DCVILTDSNTGLSKRCGFVTFKNISGVMKALKQQQQIINGK 258
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 6/108 (5%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
++RKLF+R L TT E L+ +FS +G +E+ V++ D TG SK GF+TFK+I G M A
Sbjct: 188 SKRKLFVRNLSDTTTAEKLKEVFSQFGNVEDCVILTDSNTGLSKRCGFVTFKNISGVMKA 247
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
LK+ + I+G+V +LA N N+ V ++ R VPN +S
Sbjct: 248 LKQQQQIINGKVAFISLAFPQKLSN--NHSVTINSR----TPVPNTLS 289
>gi|148682805|gb|EDL14752.1| mCG117968 [Mus musculus]
Length = 317
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L VV+ D T +S+G+GF+T+ ++
Sbjct: 6 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTNCVVMRDPNTKRSRGFGFVTYATVEEV 65
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV V S + P ++++KIFVG + D L +F
Sbjct: 66 DAAMNARPHKVDGRVVEPKRTV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 122
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 123 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 181
>gi|390354396|ref|XP_003728322.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 410
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL W+T+T+GLR F +GE++E V++ D T +S+G+GF+TF ++
Sbjct: 22 KMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQR 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++D + +A S +P VS +KIFVG + + L F YG++
Sbjct: 82 GTHEVDKKKVDPKVAFPKRS-----HPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
EE L FD+ T + +GF ++ + + + +DGK L + KKA+P M
Sbjct: 137 EEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGK-----LVEVKKAQPKEVM 191
Query: 248 GPDGGGPGNVSM 259
P +M
Sbjct: 192 MPQNAAKNRAAM 203
>gi|433286562|pdb|2LYV|A Chain A, Solution Structure Of The Two Rrm Domains Of Hnrnp A1
(up1) Using Segmental Isotope Labeling
Length = 197
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 10 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 69
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 70 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 126
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 127 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 185
>gi|426247087|ref|XP_004017318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q KLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPKQLWKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|402867876|ref|XP_003898055.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPEEPEQLRKLFIGGLSFETTDETLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
+ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVGEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|348523119|ref|XP_003449071.1| PREDICTED: DAZ-associated protein 1-like [Oreochromis niloticus]
Length = 435
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 129/290 (44%), Gaps = 31/290 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR+ FS YGE+ + V++ DK T +S+G+GF+ FK + L+
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 132 PSKKIDGR---------------VTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
+DGR + T G+ +S + +KIFVG +P++
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKS------KKIFVGGIPHNCG 125
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
+L +F +G + E + +D + +P+GF ++ + A+ + GK++
Sbjct: 126 EPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEV 185
Query: 237 RLADNKKAK---PMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLG 293
+ A+ + +K +GP P + ++ +G P GP G +G P G
Sbjct: 186 KKAEPRDSKAPGQLGPGQWAPRGI-LSAANGWTAQPAQGWQQPYGPQGVWVSTTGQPIGG 244
Query: 294 H--HLNSSLGGPGQVPSSMGG----VGAGGYGAGLGGPYGGYGGPGSTGY 337
+ L + G P Q PS AGG+ A G P GY GY
Sbjct: 245 YGPPLPTGRGTPAQPPSPFNAFLVTTPAGGFAAPQGYPQQGYSTAPQFGY 294
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S AD++ + +K+F+ G+ + LR F+ +G + E V+I D + +G+GFITF+
Sbjct: 105 SKADSNKS-KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 162
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 156 NNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTA 215
NN V + K+FVG + + + L +F+ YGE+ + + DK T + +GF +K
Sbjct: 3 NNLVGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDP 62
Query: 216 EGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
+ L +DG+ ++ KP P G P G
Sbjct: 63 NCVRTVLETKPHNLDGRNID--------PKPCTPRGMQPEKSRTKEG 101
>gi|125577795|gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japonica Group]
Length = 481
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT + LR F YGE+ EAV++ D+ATG+++G+GFI F
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 120 KH-IDGAML-----ALKEPSKKIDGRVTV---TNLAVAGNSGNSTNNPVDVSLRKIFVGN 170
KH IDG M+ + +PS ++ + V A++ + G++ +P +KIFVG
Sbjct: 67 KHMIDGRMIHDDDDGVLDPSMVVEAKKAVPRDDQHALSKSGGSAHGSPGPSRTKKIFVGG 126
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
+ + ++ +F +G I + + +D T +P+GF Y + + AL ++
Sbjct: 127 LASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELN 186
Query: 231 GKQLNCRLADNKKAKP 246
GK + + A K+ P
Sbjct: 187 GKMVEVKRAVPKELSP 202
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T R F +G + + VV+ D T + +G+GFIT+ D AL
Sbjct: 120 KKIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 179
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 180 KTFHELNGKMVEVKRAV 196
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 5/182 (2%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP KLF+ GL W T++E LR F +G + + +++ D T +S+G+GFITF
Sbjct: 36 DPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVD 95
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
LK P +DG+ A N N +KIFVG V D S++++ A+F
Sbjct: 96 KVLKCPIHTLDGKKIDPKHATPKNRAKQANR-----TKKIFVGGVSQDTSSEEVKAYFNQ 150
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 151 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQ 210
Query: 247 MG 248
G
Sbjct: 211 QG 212
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLA 128
K+FI GL W+TT + L+ FS +GE+ E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 172
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+DG++ A+ + T+ KIFVG V + + F +G
Sbjct: 173 ----EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQDFKQFFMQFG 220
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 221 RVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSRPLEIL-GKSIEV-----KKAQPRG 274
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ + T + + F +G + +A +++DK TG+ +G+
Sbjct: 180 IIDPKRAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGF 239
Query: 115 GFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGN 150
GF+TF L P + + + V GN
Sbjct: 240 GFVTFDSEAAVEATLSRPLEILGKSIEVKKAQPRGN 275
>gi|154183823|gb|ABS70764.1| Hnrp1 [Haplochromis burtoni]
Length = 289
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D + +S+G+GF+T+ +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S +N P ++++KIFVG + D L +F
Sbjct: 69 DAAMSARPHKVDGRVVEPKRAV---SREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+G+IE + D+ TGK +GFA + + ++ T++ R A K+
Sbjct: 126 QQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKALTKQ 184
>gi|344284648|ref|XP_003414077.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Loxodonta africana]
Length = 372
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 STVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GF + + ++ TV+G R
Sbjct: 120 HLRHYFEQYGKIEVIEIMTDQGSGKKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
+K+
Sbjct: 180 VLSKQ 184
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 21/179 (11%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLAL 129
+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK ++ M+
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ + T+ KIFVG V + + F +G
Sbjct: 60 ---EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQDFKQFFMQFGR 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 109 VIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKTIEV-----KKAQPRG 161
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 45 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF AL P + + + V
Sbjct: 96 EQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKTIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 21/179 (11%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLAL 129
+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ + T+ KIFVG V + + F +G
Sbjct: 60 ---EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEQDFKQFFMQFGR 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 109 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEV-----KKAQPRG 161
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +
Sbjct: 45 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAN 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF AL P + + + V
Sbjct: 96 EQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ F YGE+ EAV++ D+ TG+++G+GF+ F A + +
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTN--------NPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV + + N +P +KIFVG +P+ ++ +
Sbjct: 67 -KHIIDGRTVEAKKAVPRDDQQTINRQSGSIHGSPSPGRTKKIFVGGLPSTITESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L ++GK + + A K+
Sbjct: 126 FDQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ ++D +DG+ + + A
Sbjct: 61 ERVIMDK-HIIDGRTVEAKKA 80
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F +G + + VV+ D T + +G+GFIT+ + L
Sbjct: 106 KKIFVGGLPSTITESDFKKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAVDRVLY 165
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 166 KTFHELNGKMVEVKRAV 182
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 67 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 124
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V +S + P RKIFVG +P+ ++ D+L HF+ YG
Sbjct: 125 --EDEHVIDGRTVEVKRTVPREEMSSKDGP---KTRKIFVGGLPSSLTEDELREHFSPYG 179
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+I E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 180 KIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 235
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
+T D I + L + ++D + V R V S D P RK+F+ GL T
Sbjct: 112 VTFSDPSVIDKVLEDEHVIDGRTVEVKR--TVPREEMSSKDG-PKTRKIFVGGLPSSLTE 168
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
+ LR FS YG++ E ++LD +TG+S+G+GF+TF+ D + E
Sbjct: 169 DELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 215
>gi|296083709|emb|CBI23698.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 40/270 (14%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLFI G+ W+T+ + L+ F +YGE+ +AVV+ DKATG+ +G+GF+ F
Sbjct: 2 DSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILD 61
Query: 120 -----KHI-DGAMLALKEPSKKIDGRVTVT--NLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
KHI DG + K + + + + N A NSG N V +KIFVG +
Sbjct: 62 RVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGN----VKTKKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P +S + +F +G + + + +D+ T +P+GF + T + L ++G
Sbjct: 118 PPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNG 177
Query: 232 KQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPP 291
KQ+ + A K A P GGG S YG GG+ + G
Sbjct: 178 KQVEVKRALPKDANP----GGG-----------------SRYQGYGASGGNPTTYDGRMD 216
Query: 292 LGHHLNSSLGGPGQVPSSMGGVGAGGYGAG 321
++ G G P G A GYG G
Sbjct: 217 SNRYMQPQNTGGGFPPYGSSGYSAPGYGYG 246
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 21/179 (11%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLAL 129
+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ + T+ KIFVG V + + FA +G
Sbjct: 60 ---EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEHDFKEFFAQFGR 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 109 VIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLE-ICGKPIEV-----KKAQPRG 161
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +
Sbjct: 45 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAN 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ F+ +G + +A +++DK TG+ +G+GF+TF AL P + + V
Sbjct: 96 EHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEICGKPIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|296190480|ref|XP_002743214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Callithrix jacchus]
Length = 320
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIF G + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 16/234 (6%)
Query: 56 VLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYG 115
L + S+ ++KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+G
Sbjct: 61 CLRTRESMPSEQEERKKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFG 120
Query: 116 FITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRK 165
F+ FK + L +DGR P + K
Sbjct: 121 FVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNK 180
Query: 166 IFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDP 225
IFVG +P++ +L +F +G + E + +D + +P+GF ++ + A+
Sbjct: 181 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMH 240
Query: 226 IKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ GK++ + A+ + +K P G PG G +VP +A G G P
Sbjct: 241 FHDIMGKKVEVKRAEPRDSKSQAP--GQPGASQW----GSRVVPSAANGWAGQP 288
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 21/179 (11%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLAL 129
+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ + T+ KIFVG V + + FA +G
Sbjct: 60 ---EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEHDFKEFFAQFGR 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 109 VIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLE-ICGKPIEV-----KKAQPRG 161
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +
Sbjct: 45 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAN 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ F+ +G + +A +++DK TG+ +G+GF+TF AL P + + V
Sbjct: 96 EHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEICGKPIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP KLF+ GL W T++E LR F +G + + +++ D T +S+G+GFITF
Sbjct: 57 DPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVD 116
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
LK P +DG+ A N N +KIFVG V D S+D++ A+F
Sbjct: 117 KVLKCPIHTLDGKKIDPKHATPKNRAKQANR-----TKKIFVGGVSQDTSSDEVKAYFNQ 171
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 172 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 229
>gi|348511819|ref|XP_003443441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 317
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL +TT EGLR F YG L + VV++++ G+S+ +GFIT+ + A A+
Sbjct: 34 KLFVGGLNVETTDEGLRKYFEQYGTLSDCVVVMNQQLGRSRCFGFITYSTPEEADAAMAA 93
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++G A+A N N + +++KIFVG V + + + L +F+ +G +E
Sbjct: 94 KPHVVEGNNVEVKRAIAREDAN--NPDILANVKKIFVGGVKDHIVEENLTEYFSQFGAVE 151
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+ + DKQTG+ +GF ++ + A A++ T++G ++ + A K+
Sbjct: 152 KAEIISDKQTGRKRGFGFVFFEDTDSATKAVLTKYHTINGNKVEVKKALTKQ 203
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 46 LSSAVARHD----DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAV 101
+ A+AR D D+L +V+ K+F+ G+ E L FS +G +E+A
Sbjct: 105 VKRAIAREDANNPDILANVK----------KIFVGGVKDHIVEENLTEYFSQFGAVEKAE 154
Query: 102 VILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDG 138
+I DK TG+ +G+GF+ F+ D A A+ I+G
Sbjct: 155 IISDKQTGRKRGFGFVFFEDTDSATKAVLTKYHTING 191
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 134 KKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEG 193
KK DG L+ A +SG + + L K+FVG + + + + L +F YG + +
Sbjct: 13 KKRDG------LSCAPSSGETMTSK----LCKLFVGGLNVETTDEGLRKYFEQYGTLSDC 62
Query: 194 PLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ ++Q G+ + F Y T E A AA+ V+G + + A
Sbjct: 63 VVVMNQQLGRSRCFGFITYSTPEEADAAMAAKPHVVEGNNVEVKRA 108
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 114/234 (48%), Gaps = 35/234 (14%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T EGLR FS +GE+ E +V+ D T +S+G+GF+TF L
Sbjct: 23 KMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPASVEKVLAN 82
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++DG+ +A + +P V+ +K+FVG + + + + +F +G I
Sbjct: 83 GPHELDGKKIDPKIAFPKRA-----HPKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRI 137
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
E+ L FDKQT + +GF ++ + +VD + V ++N ++ + KKA+P M
Sbjct: 138 EDAMLMFDKQTNRHRGFGFVTFELED-----VVDKVCEVHFHEINNKMVECKKAQPKEVM 192
Query: 248 GPDGGGPGNVSMNHGDGMGMVPP--------------SAGGSYGGPGGHGYPFS 287
P+ S+ G G +V P S GG G P G GYPF+
Sbjct: 193 MPN-------SVARGRGAELVWPLGALTEAGFPAYGYSRGGYPGYPTGFGYPFA 239
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E +++ F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 111 KKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFELED 163
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 147 VAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKG 206
VA S +S+ N K+F+G + + + L +F+ +GEI E + D T + +G
Sbjct: 5 VAVQSNSSSPNEAAHDPGKMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRG 64
Query: 207 FALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
F + + L + +DGK+++ ++A K+A P
Sbjct: 65 FGFVTFADPASVEKVLANGPHELDGKKIDPKIAFPKRAHP 104
>gi|47218115|emb|CAG09987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 419
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ + + +S+G+GF+T+ +
Sbjct: 2 EPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPSCKRSRGFGFVTYSSLREV 61
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+K K+DGRV AV S +N P +S++KIFVG + D D++ +F
Sbjct: 62 DEAMKARPHKVDGRVVEPKRAV---SREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYF 118
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + ++ TGK +GF + + + T++ R A +K+
Sbjct: 119 EKYGKIECVDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKALSKQ 177
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 15/193 (7%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D + KLF+ G+ WDTT E L+ F+ YG++ + V++ DK TG+ +G+GF+ F D ++
Sbjct: 2 DSDEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVF--ADPSV 59
Query: 127 L-ALKEPSKKIDGRVTVTNLAVA-----------GNSGNSTNNP-VDVSLRKIFVGNVPN 173
L A+ + IDGR A++ N+G S++ + +KIFVG +P+
Sbjct: 60 LDAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGLPS 119
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ + +F YG + + + +D+ T +P+GF + T + L ++GK
Sbjct: 120 TLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKL 179
Query: 234 LNCRLADNKKAKP 246
+ + A K A P
Sbjct: 180 VEVKRALPKDANP 192
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 21/179 (11%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLAL 129
+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ + T+ KIFVG V + + + F +G
Sbjct: 60 ---EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEQDFKSFFMQFGR 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +AAL P++ + GK + KKA+P G
Sbjct: 109 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEV-----KKAQPRG 161
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +
Sbjct: 45 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAN 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ +S F +G + +A +++DK TG+ +G+GF+TF AL P + + + V
Sbjct: 96 EQDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|15226106|ref|NP_180899.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2459445|gb|AAB80680.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22530920|gb|AAM96964.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23198416|gb|AAN15735.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330253737|gb|AEC08831.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 15/190 (7%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML-A 128
Q KLFI G+ WDT LR FS +GE+ + V+ +KATG+ +G+GF+ F D A++
Sbjct: 5 QGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFS--DPAVIDR 62
Query: 129 LKEPSKKIDGRVTVTNLAV-------AGNSG--NSTNNP---VDVSLRKIFVGNVPNDMS 176
+ + ID R A+ AG SG N++ N +V +KIFVG +P ++
Sbjct: 63 VLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPALT 122
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
+D+ A+F YG + + + D+ T +P+GF + + + L ++GKQ+
Sbjct: 123 SDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEV 182
Query: 237 RLADNKKAKP 246
+ A K A P
Sbjct: 183 KRALPKDANP 192
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
A+ +K+F+ GL T++ R+ F YG + +AV+++D+ T + +G+GF++F D
Sbjct: 105 ANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSV 164
Query: 126 MLALKEPSKKIDGRVTVTNLAV 147
L L + ++G+ A+
Sbjct: 165 DLVLHKTFHDLNGKQVEVKRAL 186
>gi|296188846|ref|XP_002742529.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RK FI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKPFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|218199915|gb|EEC82342.1| hypothetical protein OsI_26646 [Oryza sativa Indica Group]
Length = 472
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 19/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T + LR F +GE+ EAV++ D+ TG+++G+GF+ F
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVAERVTMD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D +T + N+G+S +P RKIFVG + ++++
Sbjct: 67 KHMIDGRMVEAKKAVPRDDQSIT------SKNNGSSIGSPGPGRTRKIFVGGLASNVTEV 120
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+ +F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 121 EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR 180
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 181 AVPKEQSP 188
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVLESVR---SIADADP-TQRKLFIRGLGWDTT 83
+ ER+T D+ ++D AV R D + S SI P RK+F+ GL + T
Sbjct: 59 VAERVTMDKHMIDGRMVEAKKAVPRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLASNVT 118
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 119 EVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEV 178
Query: 144 NLAV 147
AV
Sbjct: 179 KRAV 182
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 84 KIFVGGVAWETTEETFSKHFQKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDRVL-- 141
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V ++ + P RKIFVG +P ++ KL HF+ YG
Sbjct: 142 --EDEHTIDGRTVEVKRTVPREEMSTKDGP---KTRKIFVGGIPTSLTEGKLKEHFSSYG 196
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
++EE + D TG+ +GF +++ + + + + + + GKQ+ + A+ KK
Sbjct: 197 KVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKRAEPKK 252
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 33 IVERLTSDQ-LLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIF 91
+++R+ D+ +D + V R V S D P RK+F+ G+ T L+ F
Sbjct: 136 VIDRVLEDEHTIDGRTVEVKR--TVPREEMSTKDG-PKTRKIFVGGIPTSLTEGKLKEHF 192
Query: 92 SAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
S+YG++EE +++D +TG+S+G+GF+TF+ D + E
Sbjct: 193 SSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSE 232
>gi|390464176|ref|XP_003733182.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Callithrix jacchus]
Length = 320
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFDTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W+TT E L+ FS YGE+ + VV+ + TG+S+G+GF+TF + AL+
Sbjct: 13 KLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRALEN 72
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDV-SLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+DGR + + S + P K+F+G +P +++ L + F YG +
Sbjct: 73 GPHTLDGRT----IDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGNV 128
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
E + +D++ K +GF ++ + A D + GKQ+ KKA+P D
Sbjct: 129 MEVVIMYDQEKKKSRGFGFLSFENEVAVERATTDHFVHISGKQVEV-----KKAEPR--D 181
Query: 251 GGGPGNVSM---NHGDGMGMVPPSAGGSYGGP 279
G N SM ++ G PP G GGP
Sbjct: 182 GNQNSNNSMSTDSYQWGSPQAPPMGNGQMGGP 213
>gi|291384352|ref|XP_002708768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 3/184 (1%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++ T E LRS F +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADK 179
++ A+ K+DGRV AV +S ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVL--REDSQRPGAHLTVKKIFVGGIKEDTEEHH 120
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R A
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Query: 240 DNKK 243
+K+
Sbjct: 181 LSKQ 184
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 14/244 (5%)
Query: 56 VLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYG 115
V+ +S A++ +RKLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+G
Sbjct: 84 VVWIQKSFAESSVPRRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFG 143
Query: 116 FITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRK 165
F+ FK + L +DGR P + K
Sbjct: 144 FVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNK 203
Query: 166 IFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDP 225
IFVG +P++ +L +F +G + E + +D + +P+GF ++ + A+
Sbjct: 204 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMH 263
Query: 226 IKTVDGKQLNCRLADNKKAKPMGPDGGGPGN----VSMNHGDGMGMVPPSAGGSYGGPGG 281
+ GK++ + A+ + +K P G V+ + +G PP GP G
Sbjct: 264 FHDIMGKKVEVKRAEPRDSKNQAPGQAGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQG 323
Query: 282 HGYP 285
P
Sbjct: 324 MWVP 327
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T+++ L+ F+ +G + + +++ D T +S+G+GFITF+
Sbjct: 194 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 253
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N N +KIFVG V D SA+++ A+F+
Sbjct: 254 DKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-----KTKKIFVGGVSQDTSAEEVKAYFS 308
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G +EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 309 QFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 367
>gi|39654464|pdb|1PGZ|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(6-Mi)
G); A Human Telomeric Repeat Containing 6-Methyl-8-(2-
Deoxy-Beta-Ribofuranosyl)isoxanthopteridine (6-Mi)
Length = 195
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 68 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 125 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 183
>gi|387016398|gb|AFJ50318.1| HNRPA1 protein [Crotalus adamanteus]
Length = 212
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 22 EPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 81
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 82 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 138
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 139 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 197
>gi|221480563|gb|EEE19030.1| hypothetical protein TGGT1_105690 [Toxoplasma gondii GT1]
gi|221505534|gb|EEE31179.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 430
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D + RKLF+ GL TTT+ LR+ F YG++ ++ V+ DK TG+S+G+GFITF D
Sbjct: 117 DKELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPD- 175
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAH 183
+ + + +DG A+ P D ++FVG + +D++ + L A+
Sbjct: 176 PVARVADMRHTVDGTQVEVRRAIPREEARDHGGPGADRDAGRLFVGGISDDVNDESLRAY 235
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
F YGEI+ + D+Q +P+GF +++ + A+ A+
Sbjct: 236 FRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAI 274
>gi|237838585|ref|XP_002368590.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
gi|211966254|gb|EEB01450.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
Length = 430
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D + RKLF+ GL TTT+ LR+ F YG++ ++ V+ DK TG+S+G+GFITF D
Sbjct: 117 DKELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPD- 175
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAH 183
+ + + +DG A+ P D ++FVG + +D++ + L A+
Sbjct: 176 PVARVADMRHTVDGTQVEVRRAIPREEARDHGGPGADRDAGRLFVGGISDDVNDESLRAY 235
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
F YGEI+ + D+Q +P+GF +++ + A+ A+
Sbjct: 236 FRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAI 274
>gi|397520388|ref|XP_003830301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 320
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L VV+ D T +S+G+ F+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTACVVMRDPNTKRSRGFEFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 AAVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSARGR 199
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W+T+ E L+ FS YGE+ + VV+ + TG+S+G+GF+TF + AL+
Sbjct: 19 KLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 78
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDV-SLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+DGR + + S + P K+F+G +P +++ L + F YG +
Sbjct: 79 GPHTLDGRT----IDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGTV 134
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
E + +D++ K +GF ++ + A D + GKQ+ KKA+P D
Sbjct: 135 MEVVIMYDQEKKKSRGFGFLSFENESAVERATTDHFVHISGKQVEV-----KKAEPR--D 187
Query: 251 GGGPGNVSMN---HGDGMGMVPPSAGGSYGGP 279
G + SMN + G PP G GGP
Sbjct: 188 GNQNNSNSMNTDSYQWGSPQAPPMGNGQMGGP 219
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 17/177 (9%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALKE 131
+FI GL W+TT E LR FS +GE++E V+ D ATG+S+G+GF+TF+ + +KE
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKE 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + F +G +
Sbjct: 61 --HYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQDFKQFFMQFGRVV 110
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + AL P++ + GK + KKA+P G
Sbjct: 111 DATLMMDKDTGRPRGFGFVTFDGDAAVEKALSRPLEIL-GKPIEV-----KKAQPRG 161
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 45 LTFRDAKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF AL P + + + V
Sbjct: 96 EQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALSRPLEILGKPIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 105/196 (53%), Gaps = 13/196 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR FS YG++ E +V+ D AT +S+G+GFITF L +
Sbjct: 123 KMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVDKVLAQ 182
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DG+ +A + +P V+ +KIFVG + + + + ++F +G I
Sbjct: 183 GTHELDGKKIDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 237
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
E+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P +
Sbjct: 238 EDAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQPK--E 290
Query: 251 GGGPGNVSMNHGDGMG 266
P N++ G G
Sbjct: 291 VMLPANLAKTRAAGRG 306
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++S F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 211 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 263
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 15/227 (6%)
Query: 22 PNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWD 81
P+ TP+ + V+ +++ S V + + +A+ RK+FI GL W+
Sbjct: 38 PSTTTPRSPQWHVQSANISIPANLMRSHVEKCFAYNHVPLNQVNANSQCRKMFIGGLNWE 97
Query: 82 TTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVT 141
TT + L+ F+ +GE+ E V+ D ATG+S+G+GF+TF+ + + + +DG++
Sbjct: 98 TTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNIVMVK-EHYLDGKII 156
Query: 142 VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQT 201
A+ T+ KIFVG V + + + A F +G + + L DK+T
Sbjct: 157 DPKRAIPREEQERTS--------KIFVGGVSQEATEEDFTAFFKQFGRVVDATLMMDKET 208
Query: 202 GKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
G+P+GF + A L P++ + GK + K+A+P G
Sbjct: 209 GRPRGFGFVTFDGDAAVDATLKGPLQIL-GKPIEV-----KRAQPRG 249
>gi|82753560|ref|XP_727727.1| UBP1 interacting protein 2a [Plasmodium yoelii yoelii 17XNL]
gi|23483711|gb|EAA19292.1| UBP1 interacting protein 2a [Plasmodium yoelii yoelii]
Length = 344
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 30/303 (9%)
Query: 10 DENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPT 69
D N + D ES + R+++ L+ +QL+D+L++A + H+D+ + + P+
Sbjct: 40 DLNDKKIKDEESE----IEQLRRLIAPLSKEQLIDILATAASIHEDIRDRCNEAVTSSPS 95
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
R+L +R + + T E F +GE+E+ +++ +K G+SKGYGF+TFK+I+ L
Sbjct: 96 TRRLMVRNIPFSTKDEQFLKYFETFGEIEDGIIVREKE-GRSKGYGFVTFKYIESVQKCL 154
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K + +D + L + + N K+FV N+ + L F YG+
Sbjct: 155 K-TTHTLDNKDLQVRLVADPFTDHYQN--------KLFVRNLSQKTNVTTLRNIFEKYGK 205
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGP 249
+EE + D + GK KG+ + + + A + P + +D + + A ++ K
Sbjct: 206 LEECVIIHDNE-GKSKGYGFLTFSSPKEAFKVMQQPERIIDNRVVFLHFAVSQNYKKYQN 264
Query: 250 DGGG-PGNVSMNHGDGMGMV--------PPSAGGSYGGPGGHGYPFSGPP------PLGH 294
+ N + N+ PP P YP S P P G+
Sbjct: 265 NHAYIKKNQNFNYYQKNNANNRNNFIRRPPVYYRENESPNTFNYPVSFVPNVYSNIPHGY 324
Query: 295 HLN 297
N
Sbjct: 325 QFN 327
>gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
gi|55670114|pdb|1U1K|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt 7da
Ggg); A Human Telomeric Repeat Containing
7-Deaza-Adenine
gi|55670116|pdb|1U1L|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt Prn
Ggg); A Human Telomeric Repeat Containing Nebularine
gi|55670118|pdb|1U1M|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 7gu
Gg); A Human Telomeric Repeat Containing 7-Deaza-Guanine
gi|55670120|pdb|1U1N|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta (Prn)
Gg); A Human Telomeric Repeat Containing Nebularine
gi|55670122|pdb|1U1O|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggttag(Di)g); A Human Telomeric Repeat Containing
Inosine
gi|55670124|pdb|1U1P|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 2pr
Gg); A Human Telomeric Repeat Containing 2-Aminopurine
gi|55670126|pdb|1U1Q|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggtta(Di)gg); A Human Telomeric Repeat Containing
Inosine
gi|55670128|pdb|1U1R|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(2pr)
G); A Human Telomeric Repeat Containing 2-Aminopurine
Length = 196
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 136/314 (43%), Gaps = 34/314 (10%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
Q KLFI G+ W+TT E L+ FS +GE+ +A V+ DK TG+ +G+GF+ + AL
Sbjct: 5 QGKLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAAL 64
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTN--NP------------------VDVSLRKIFVG 169
+EP +DGR A++ +T NP +KIFVG
Sbjct: 65 QEP-HTLDGRTVDVKRALSREEQQATKAVNPSAGRNAGGGGGGGGGGDAGGARTKKIFVG 123
Query: 170 NVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTV 229
+P+ ++ ++ +F +G + + + +D+ T +P+GF + + + L +
Sbjct: 124 GLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDL 183
Query: 230 DGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGP 289
GK + + A ++A P GG H + P S SY G G G
Sbjct: 184 GGKMVEVKRALPREANPGSGGGGRSMGGGGFHSNNG---PNSNASSYDGRGDAGRYGQAQ 240
Query: 290 PPLGHHLNSSLGGPGQVPSSMGGVGAGGYGAGLGGPYGGYGGPGSTGYGGLGGAGGGAGA 349
G + G G P+ GYG G P YG GS GYGG+ A AGA
Sbjct: 241 QGSGGYPGYGAGAYGSAPT--------GYGYGHTNPGTTYGNYGSAGYGGVPAA--YAGA 290
Query: 350 GGALGGAAGGLGGG 363
G AA G GG
Sbjct: 291 YGNPSAAASGYQGG 304
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 15/176 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT + LR FS YGE+ E V+ D ATG+S+G+GF+TFK + + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVK- 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V + + + +FA +G + +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDHEFREYFAQFGRVVD 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
L DK TG+P+GF +++ G A L ++ + GK + KKA+P G
Sbjct: 112 ATLMMDKDTGRPRGFGFVTFESEAGVDACLSANLE-IHGKPIEV-----KKAQPRG 161
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +TT
Sbjct: 45 LTFKDPKTVNVVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQETT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
R F+ +G + +A +++DK TG+ +G+GF+TF+ G L
Sbjct: 96 DHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACL 141
>gi|29125866|emb|CAD67787.1| hn ribonucleoprotein A2 [Tetraodon nigroviridis]
Length = 191
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D ++ +S+G+GF+T+ +D
Sbjct: 4 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVDEV 63
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
LA+ K+DGRV AV S +N P V+++KIFVG + D + +F
Sbjct: 64 DLAMGARPHKVDGRVVEPKRAV---SREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYF 120
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G+IE + D+ +GK +GFA + + ++ T++ NC +
Sbjct: 121 ERFGKIEIIDIIADRNSGKKRGFAFVTFDDHDPVDRIVIQKYHTINSH--NCEVRKALTR 178
Query: 245 KPMGPDGGGPG 255
+ M G G G
Sbjct: 179 QEMQTTGVGMG 189
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT +R F +G++E +I D+ +
Sbjct: 78 VVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIIADRNS 137
Query: 109 GKSKGYGFITF 119
GK +G+ F+TF
Sbjct: 138 GKKRGFAFVTF 148
>gi|390354398|ref|XP_003728323.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Strongylocentrotus purpuratus]
Length = 366
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL W+T+T+GLR F +GE++E V++ D T +S+G+GF+TF ++
Sbjct: 22 KMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQR 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++D + +A S +P VS +KIFVG + + L F YG++
Sbjct: 82 GTHEVDKKKVDPKVAFPKRS-----HPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
EE L FD+ T + +GF ++ + + + +DGK L + KKA+P M
Sbjct: 137 EEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGK-----LVEVKKAQPKEVM 191
Query: 248 GPDGGGPGNVSM 259
P +M
Sbjct: 192 MPQNAAKNRAAM 203
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
S+ D+ K+FI GL W T+ + LR F +GE+ E +V+ D T +S+G+GFITF
Sbjct: 12 SLNDSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFAD 71
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKL 180
+ L +P ++D + +A + P V+ +KIFVG + + +
Sbjct: 72 VSSVDKVLAQPHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSASTVVEDV 126
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G++E+ L FDK T + +GF ++ + +V+ + + ++N ++ +
Sbjct: 127 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED-----IVEKVCEIHFHEINNKMVE 181
Query: 241 NKKAKP 246
KKA+P
Sbjct: 182 CKKAQP 187
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 19/195 (9%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLF+ G+ W+T + LR F+ YGE+ +A+V+ DK TG+ +G+GF+ F
Sbjct: 2 DSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVT--VTNLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
KH ID + +K + + +V+ NL + +SG N +KIFVG +
Sbjct: 62 RVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKT----KKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P ++ ++ +F YG + + + +D+ T +P+GF + + + + L + G
Sbjct: 118 PPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSG 177
Query: 232 KQLNCRLADNKKAKP 246
KQ+ + A K A P
Sbjct: 178 KQVEVKRALPKDANP 192
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 165 KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD 224
K+FVG + + DKL HF YGE+ + + DK TG+P+GF ++ L +
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66
Query: 225 PIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDG 264
++D ++++ + A +++ + + G GN++ + G
Sbjct: 67 K-HSIDTREVDVKRAMSREEQQV---SGRTGNLNTSRSSG 102
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 14 AVLSDLESPNRLTPQ----DARKI-VERLTSDQLLDVLSSAVARHDDVLESVRSIADADP 68
+ SD +R+ + D R++ V+R S + V R ++ S S DA
Sbjct: 52 VIFSDPSVLDRVLQEKHSIDTREVDVKRAMSREEQQV----SGRTGNLNTSRSSGGDAYN 107
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
+K+F+ GL T E R F YG + + ++ D+AT + +G+GF++F D
Sbjct: 108 KTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSV 167
Query: 129 LKEPSKKIDGRVTVTNLAV 147
L + + G+ A+
Sbjct: 168 LHKTFHDLSGKQVEVKRAL 186
>gi|390464603|ref|XP_003733247.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Callithrix jacchus]
Length = 288
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSRE--DSQRPSAHLTVKKIFVGGIKEDTEEHHLRDYFE 126
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 127 QYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 99/182 (54%), Gaps = 10/182 (5%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + L+ FS +GE+ + VV+ D T KS+G+GFIT+K
Sbjct: 8 EPEQLRKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPV-DVSLRKIFVGNVPNDMSADKLLAHF 184
A++ KIDGR AVA + NP+ + ++KIFVG + D S D L +F
Sbjct: 68 DDAMRSRPHKIDGREVEPKRAVA---REESGNPLAHMLVKKIFVGGIKEDTSEDHLRDYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+ YG IE + DK TGK +GFA + + VD I + +N ++ KKA
Sbjct: 125 SKYGSIESVDVISDKDTGKKRGFAFVTFDDHDP-----VDKIVGLKYHTINDHKSEVKKA 179
Query: 245 KP 246
P
Sbjct: 180 VP 181
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 74 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 133
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 134 DAAMCARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 191
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+Q+GK +GFA + + +V T++G + A +K+
Sbjct: 192 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQ 249
>gi|303312249|ref|XP_003066136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105798|gb|EER23991.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040133|gb|EFW22067.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coccidioides
posadasii str. Silveira]
Length = 495
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALKE 131
+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK + +KE
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V D + F +G +
Sbjct: 61 --HYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQDANEQDFKKFFMQFGRVV 110
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 111 DATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEV-----KKAQPRG 161
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ D
Sbjct: 45 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQERTSKIFVGGVSQDAN 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF L +P + + + V
Sbjct: 96 EQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 16/212 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W+TT E L+ F YGE+ + VV+ + TG+S+G+GF+TF D AL+
Sbjct: 19 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALEN 78
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDV-SLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+DGR + + S + P K+F+G +P +++ L + F+ YG +
Sbjct: 79 GPHTLDGRT----IDPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNV 134
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
E + +D++ K +GF ++ + A + + GKQ+ KKA+P D
Sbjct: 135 MEVVIMYDQEKKKSRGFGFLSFENEPAVERATAEHFVNISGKQVEI-----KKAEPR--D 187
Query: 251 GGGPGNVSMN---HGDGMGMVPPSAGGSYGGP 279
G G N SMN + G PP G GGP
Sbjct: 188 GSG-NNNSMNADSYQWGSPQAPPMGNGQMGGP 218
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ F YGE+ EAV++ D+ TG+++G+GF+ F A + +
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTN--------NPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV + + N +P +KIFVG +P+ ++ +
Sbjct: 67 -KHIIDGRTVEAKKAVPRDDQQTINRQTGSIHGSPSPGRTKKIFVGGLPSTITESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L ++GK + + A K+
Sbjct: 126 FDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ ++D +DG+ + + A
Sbjct: 61 ERVIMDK-HIIDGRTVEAKKA 80
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F +G + + VV+ D T + +G+GFIT+ + L
Sbjct: 106 KKIFVGGLPSTITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLY 165
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 166 KTFHELNGKMVEVKRAV 182
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 58 ESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFI 117
+S S AD+ K+FI GL W TT EGL+ F YGE++E +V+ D T +S+G+GF+
Sbjct: 7 QSSLSTADSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFV 66
Query: 118 TFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMS 176
TF G L + ++D + +A + P V+ +KIFVG + + +
Sbjct: 67 TFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRA-----QPKLVTRTKKIFVGGLSVNTT 121
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
+ + +F +G++++ L FDK T + +GF ++ + +V+ + + ++N
Sbjct: 122 IEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINN 176
Query: 237 RLADNKKAKP---MGPDGGGPGN 256
++ + KKA+P M P G G
Sbjct: 177 KMVECKKAQPKEVMSPTGSARGR 199
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 14/192 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 113
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V N+ + P RKIF+G +P ++ D+L HF+ YG
Sbjct: 114 --EDEHVIDGRTVEVKRTVPREEMNTKDGP---KTRKIFIGGLPASLTEDELKDHFSLYG 168
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKKAKPM 247
++ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 169 KVLEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK---H 225
Query: 248 GPDGGGPGNVSM 259
G D G G S
Sbjct: 226 GSDNIGNGRSSQ 237
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+FI GL T + L+ FS YG++ E ++LD +TG+S+G+GF+TF+ D
Sbjct: 141 PKTRKIFIGGLPASLTEDELKDHFSLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDSVER 200
Query: 128 ALKE 131
+ E
Sbjct: 201 VISE 204
>gi|224065561|ref|XP_002301858.1| predicted protein [Populus trichocarpa]
gi|222843584|gb|EEE81131.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 10/190 (5%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D + KLF+ G+ WDTT + LR F+ YGE+ + V++ DK TG+ +G+GF+ F D ++
Sbjct: 2 DSDEGKLFVGGIAWDTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFS--DPSV 59
Query: 127 LA-LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
L + IDGR TV L ++ G S + +KIFVG +P+ ++ D +F
Sbjct: 60 LDPVLHDKHTIDGR-TVIILPLSLLWGLSC-----IGTKKIFVGGLPSTVTEDGFRQYFQ 113
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
YG + + + +D+QT +P+GF + + + L ++GK + + A K A
Sbjct: 114 SYGHVNDVVVMYDQQTQRPRGFGFITFDSEDAVDNVLQKTFHELNGKLVEVKRALPKDAN 173
Query: 246 PMGPDGGGPG 255
P G +G G G
Sbjct: 174 P-GSEGRGSG 182
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 100/188 (53%), Gaps = 14/188 (7%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W TT EGLR FS +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 1 MFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + P V+ +KIFVG + + + + + +F +G+++
Sbjct: 61 RHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 115
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MG 248
+ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVMS 170
Query: 249 PDGGGPGN 256
P G G
Sbjct: 171 PTGSARGR 178
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 140
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSARGR 199
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 19/195 (9%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLF+ G+ W+T + LR FS YGE+ +A+V+ DK TG+ +G+GF+ F
Sbjct: 2 DSDQGKLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVT--VTNLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
KH ID + +K + + +V+ NL + +SG + N +KIFVG +
Sbjct: 62 RVLQDKHNIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDSFNKT----KKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P ++ ++ +F YG + + + +D+ T +P+GF + + + L + G
Sbjct: 118 PPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHKTFHDLSG 177
Query: 232 KQLNCRLADNKKAKP 246
KQ+ + A K A P
Sbjct: 178 KQVEVKRALPKDANP 192
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 165 KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD 224
K+FVG V + DKL HF+ YGE+ + + DK TG+P+GF ++ L D
Sbjct: 7 KLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQD 66
Query: 225 PIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDG 264
+D ++++ + A +++ + + G GN++ + G
Sbjct: 67 K-HNIDTREVDVKRAMSREEQQV---SGRTGNLNTSRSSG 102
>gi|357459939|ref|XP_003600251.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355489299|gb|AES70502.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 481
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ F+ YGE+ EAV++ D+ATG+++G+GF+ F A + +
Sbjct: 7 KLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVIID 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTN--------NPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV + + N +P +KIFVG +P+ ++ +
Sbjct: 67 K-HIIDGRTVEAKKAVPRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITESDFKMY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L ++GK + + A K+
Sbjct: 126 FDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +FA YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ ++D +DG+ + + A
Sbjct: 61 ERVIIDK-HIIDGRTVEAKKA 80
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F +G + + VV+ D T + +G+GFIT+ + L
Sbjct: 106 KKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLY 165
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 166 KTFHELNGKMVEVKRAV 182
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 20/189 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT + LR FSA+GE+ EAV++ D+ TG+++G+GF+ F
Sbjct: 7 KLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVVTE 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTN-NPVDVSLRKIFVGNVPNDMSA 177
KH IDG M+ K+ + D + + NS +S + +PV +KIFVG + + ++
Sbjct: 67 KHTIDGRMVEAKKAVPRDDHQF------LNKNSSSSIHGSPVPGHTKKIFVGGLSSTITE 120
Query: 178 DKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCR 237
+F +G I + + +D T +P+GF Y + + L++ ++GK + +
Sbjct: 121 GDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLNAFHELNGKMVEVK 180
Query: 238 LADNKKAKP 246
A K+ P
Sbjct: 181 RAVPKEPSP 189
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++V L K+F+G + D + D L +F+ +GE+ E + D+ TG+ +GF V+
Sbjct: 1 MEVDLGKLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVT 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ + + T+DG R+ + KKA P
Sbjct: 61 ERVVTEK-HTIDG-----RMVEAKKAVP 82
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPT-----QRKLFIRGLGWDTTTE 85
R + E+ T D + AV R D + S + + +K+F+ GL T TE
Sbjct: 62 RVVTEKHTIDGRMVEAKKAVPRDDHQFLNKNSSSSIHGSPVPGHTKKIFVGGLS-STITE 120
Query: 86 G-LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTN 144
G + F +G + + VV+ D T + +G+GFIT+ D L +++G++
Sbjct: 121 GDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLNAFHELNGKMVEVK 180
Query: 145 LAV 147
AV
Sbjct: 181 RAV 183
>gi|410913984|ref|XP_003970468.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 319
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D+ TG+S+G+GFI FK L++
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFNKFGEVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 124
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K+DGRV A+A PV +K+FVG + D S + + +F +GEIE
Sbjct: 125 KEHKLDGRVIDPKRALA-----MKKEPV----KKVFVGGLNPDTSKEVIHEYFEAFGEIE 175
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF YK + AL + TV G + ++A K+
Sbjct: 176 NIELPQDPKTEKRRGFVFITYKEEACVKKALENKFHTVGGSKCEIKIAQPKEV 228
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 56 VLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYG 115
V++ R++A +K+F+ GL DT+ E + F A+GE+E + D T K +G+
Sbjct: 133 VIDPKRALAMKKEPVKKVFVGGLNPDTSKEVIHEYFEAFGEIENIELPQDPKTEKRRGFV 192
Query: 116 FITFKHIDGAMLALK 130
FIT+K AL+
Sbjct: 193 FITYKEEACVKKALE 207
>gi|184185549|gb|ACC68948.1| heterogeneous nuclear ribonucleoprotein A1 (predicted) [Rhinolophus
ferrumequinum]
Length = 299
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS +G L + VV+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSRSEQWGALTDCVVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|367025853|ref|XP_003662211.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
gi|347009479|gb|AEO56966.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT + LR FS +GE+ E V+ D ATG+S+G+GF+TFK + + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK- 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V + + + +FA +G + +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDHEFREYFAQFGRVVD 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
L DK TG+P+GF +++ G +A L ++ + GK + KKA+P G
Sbjct: 112 ATLMMDKDTGRPRGFGFVTFESEAGVEACLAANLE-IHGKPIEV-----KKAQPRG 161
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ +TT R F+ +G + +A +++DK TG+ +G+
Sbjct: 67 IIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGF 126
Query: 115 GFITFKHIDGAMLAL 129
GF+TF+ G L
Sbjct: 127 GFVTFESEAGVEACL 141
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSARGR 199
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 82 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 137 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 191
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 192 SPTGSARGR 200
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 162
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR FS +GE+ E V+ D TG+S+G+GF+TFK + + +
Sbjct: 117 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 176
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V D + + FA +G +
Sbjct: 177 -EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQDTTDQEFRDFFAQFGRVI 227
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF +++ G + P++ + GK + K+A+P G
Sbjct: 228 DATLMMDKDTGRPRGFGFVTFESEAGVDNCISIPLE-IHGKPIEV-----KRAQPRG 278
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ DTT
Sbjct: 162 LTFKDAKTVNIVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQDTT 212
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
+ R F+ +G + +A +++DK TG+ +G+GF+TF+
Sbjct: 213 DQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTFE 249
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSARGR 199
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 144 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 203
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 204 DAAMCARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 261
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+Q+GK +GFA + + +V T++G + A +K+
Sbjct: 262 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQ 319
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLA 128
K+FI GL W+TT + L+ FS +GE+ E V+ D ATG+S+G+GF+TF K ++ M+
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+DG++ A+ + T+ KIFVG V + + F +G
Sbjct: 87 ----EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQDFKQFFMQFG 134
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 135 RVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSRPLEIL-GKSIEV-----KKAQPRG 188
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 72 LTFRDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAT 122
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF L P + + + V
Sbjct: 123 EQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSRPLEILGKSIEVK 182
Query: 144 NLAVAGN 150
GN
Sbjct: 183 KAQPRGN 189
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSARGR 199
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT + L++ F +G++ + VV+ D T +S+G+GFIT+ H A K
Sbjct: 27 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQK 86
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D L +F YG I
Sbjct: 87 ARPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSLRDYFQHYGNI 144
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P
Sbjct: 145 VDINIVMDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALP 195
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 7/195 (3%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 68 DAAMCARPYKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 125
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK-- 243
YG+IE + D+Q+GK +GFA + + +V T++G + A +K+
Sbjct: 126 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 185
Query: 244 --AKPMGPDGGGPGN 256
A GGG GN
Sbjct: 186 RSAGSQRDRGGGSGN 200
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Anolis
carolinensis]
Length = 354
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D ++ K +GF YK E + L TV G + ++A K+
Sbjct: 182 AIELPMDPKSNKRRGFVFITYKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D + K +G+ FIT+K +EP KK+
Sbjct: 187 MDPKSNKRRGFVFITYKE--------EEPVKKV 211
>gi|85101893|ref|XP_961230.1| hypothetical protein NCU04239 [Neurospora crassa OR74A]
gi|11595517|emb|CAC18311.1| related to heterogeneous nuclear ribonucleoprotein [Neurospora
crassa]
gi|28922772|gb|EAA31994.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 503
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT + LR FS +GE+ E V+ D ATG+S+G+GF+TFK + + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK- 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V + + + +FA +G + +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDHEFREYFAQFGRVVD 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
L DK TG+P+GF +++ G +A L ++ + GK + KKA+P G
Sbjct: 112 ATLMMDKDTGRPRGFGFVTFESEAGVEACLSANLE-IHGKPIEV-----KKAQPRG 161
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ +TT
Sbjct: 45 LTFKDPKTVNIVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQETT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
R F+ +G + +A +++DK TG+ +G+GF+TF+ G L
Sbjct: 96 DHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACL 141
>gi|449443534|ref|XP_004139532.1| PREDICTED: uncharacterized protein LOC101217028 [Cucumis sativus]
gi|449505564|ref|XP_004162509.1| PREDICTED: uncharacterized LOC101217028 [Cucumis sativus]
Length = 477
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH-IDGAMLALK 130
KLFI G+ WDT + LR F +GE+ E +++ D+ATG+++G+GF+ F + A + L+
Sbjct: 5 KLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVLE 64
Query: 131 EPSKKIDGRVTVTNLAVAGNSGN--STNN------PVDVSLRKIFVGNVPNDMSADKLLA 182
+ IDGR AV + N S NN P +KIFVG + + ++
Sbjct: 65 K--HVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKK 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G I + + +D T +P+GF Y++ E + L ++GK + + A K
Sbjct: 123 YFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPK 182
Query: 243 KAKPM 247
++ P+
Sbjct: 183 ESSPV 187
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 30 ARKIVERLTSDQLLDVLSSAVARHDDVLESVRS---IADADPTQ-RKLFIRGLGWDTTTE 85
AR ++E+ D AV R D + S + + PT+ +K+F+ GL T
Sbjct: 59 ARVVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTES 118
Query: 86 GLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNL 145
+ F +G + + VV+ D T + +G+GFIT++ + L + +++G++
Sbjct: 119 DFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKR 178
Query: 146 AV 147
AV
Sbjct: 179 AV 180
>gi|94482853|gb|ABF22468.1| heterogeneous nuclear ribonucleoprotein A3 [Takifugu rubripes]
Length = 341
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ + A +S+G+GF+T+ +
Sbjct: 13 EPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREV 72
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+K K+DGRV AV S +N P +S++KIFVG + D D++ +F
Sbjct: 73 DEAMKARPHKVDGRVVEPKRAV---SREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYF 129
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + ++ +GK +GF + + + T++ R A +K+
Sbjct: 130 EKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTINLHNCEVRKALSKQ 188
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 7/174 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML-ALK 130
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF D ++L +
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFS--DPSVLDRVL 158
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
E IDGR V +S + P +KIFVG +P ++ DKL HF+ YG++
Sbjct: 159 EDEHVIDGRTVEVKRTVPKEEMSSKDGP---KTKKIFVGGIPPSLTEDKLKEHFSSYGKV 215
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
E + D TG+ +GF +++ + + + + + + GKQ+ + A+ KK
Sbjct: 216 VEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKK 269
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P +K+F+ G+ T + L+ FS+YG++ E ++LD +TG+S+G+GF+TF+ D
Sbjct: 186 PKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVER 245
Query: 128 ALKE 131
+ E
Sbjct: 246 VMSE 249
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 7/174 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML-ALK 130
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF D ++L +
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFS--DPSVLDRVL 158
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
E IDGR V +S + P +KIFVG +P ++ DKL HF+ YG++
Sbjct: 159 EDEHVIDGRTVEVKRTVPKEEMSSKDGP---KTKKIFVGGIPPSLTEDKLKEHFSSYGKV 215
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
E + D TG+ +GF +++ + + + + + + GKQ+ + A+ KK
Sbjct: 216 VEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKK 269
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P +K+F+ G+ T + L+ FS+YG++ E ++LD +TG+S+G+GF+TF+ D
Sbjct: 186 PKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVER 245
Query: 128 ALKE 131
+ E
Sbjct: 246 VMSE 249
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 16/194 (8%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP K+FI GL W TT EGLR F YGE++E +V+ D T +S+G+GF+TF G
Sbjct: 18 DPC--KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFA 185
L + ++D + +A + P V+ +KIFVG + + + + + +F
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFE 130
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+G++++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+
Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFEVED-----IVEKVCEIHFHEINNKMVECKKAQ 185
Query: 246 P---MGPDGGGPGN 256
P M P G
Sbjct: 186 PKEVMSPTSSARGR 199
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 25 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 84
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 85 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 139
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 140 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 194
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 195 SPTGSARGR 203
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 113 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 165
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 147
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 148 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSARGR 199
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+DP KLF+ GL W T++E L F +G++ + +++ D T +S+G+GFITF+ +
Sbjct: 162 SDPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSV 221
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
LK P +DG+ A N + +N +KIFVG V D SA+++ +F+
Sbjct: 222 DKVLKVPIHTLDGKKIDPKHATPKNRPKTQSNKT----KKIFVGGVSQDTSAEEVKQYFS 277
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G++EE + D+QT + +GF ++ + T+ K++ C+ A K+A
Sbjct: 278 QFGKVEETVMLMDQQTKRHRGFGFVTFEHEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 336
>gi|356566592|ref|XP_003551514.1| PREDICTED: uncharacterized protein LOC100794390 [Glycine max]
Length = 479
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ F YGE+ EAV++ D+ TG+++G+GF+ F A + +
Sbjct: 7 KLFIGGISWDTDEERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVIMD 66
Query: 132 PSKKIDGRVTVTNLAVAGN--------SGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV + SG++ +P +KIFVG +P+ ++ +
Sbjct: 67 -KHIIDGRTVEAKKAVPRDDQQNINRQSGSAHASPGPGRTKKIFVGGLPSTITESDFKMY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L ++GK + + A K+
Sbjct: 126 FDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDEERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ ++D +DG+ + + A
Sbjct: 61 ERVIMDK-HIIDGRTVEAKKA 80
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRS-IADADP---TQRKLFIRGLGWDTTTEG 86
R I+++ D AV R D + +S A A P +K+F+ GL T
Sbjct: 62 RVIMDKHIIDGRTVEAKKAVPRDDQQNINRQSGSAHASPGPGRTKKIFVGGLPSTITESD 121
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+ F +G + + VV+ D T + +G+GFIT+ + L + +++G++ A
Sbjct: 122 FKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRA 181
Query: 147 V 147
V
Sbjct: 182 V 182
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT + L++ F +G++ + VV+ D T +S+G+GFIT+ H A K
Sbjct: 27 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQK 86
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D L +F YG I
Sbjct: 87 ARPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSLRDYFQHYGSI 144
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P
Sbjct: 145 VDINIVMDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALP 195
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + LR F YG + + +++DK TGK +G+ F+ F D
Sbjct: 116 TVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 175
Query: 129 LKEPSKKIDGRVTVTNLAV 147
+ + +++G++ A+
Sbjct: 176 VLQKQHQLNGKMVDVKKAL 194
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
+RK+F+G + + D L AHF +G+I + + D +T + +GF Y + +++
Sbjct: 26 MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITY-----SHSSM 80
Query: 223 VDPIKTVDGKQLNCRLADNKKAKP 246
VD + +++ R+ + K+A P
Sbjct: 81 VDEAQKARPHKIDGRVVEPKRAVP 104
>gi|124506883|ref|XP_001352039.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505068|emb|CAD51850.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 388
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 134/303 (44%), Gaps = 31/303 (10%)
Query: 10 DENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPT 69
++N +V D +L R+++ L+ +QL+D+L+++ H+D+ E + P+
Sbjct: 85 EDNKSVKDDESEAEKL-----RRLIAPLSKEQLIDILATSALIHEDIREKCNEAVASSPS 139
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
R+L +R + + T E F ++GE+E+ +++ +K G+SKGYGF+TFK+++ L
Sbjct: 140 TRRLMVRNIPFSTRDEQFLKYFESFGEIEDGIIVREKE-GRSKGYGFVTFKYVESVQKCL 198
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K S +D + L + + N K+FV N+ + L + F YG+
Sbjct: 199 K-SSHTLDNKELQVRLVADPFTDHYQN--------KLFVRNLSQKTNVSTLRSIFEKYGK 249
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGP 249
+EE + D + GK KG+ + + A + P + +D + + A ++ K
Sbjct: 250 LEECVIIHDNE-GKSKGYGFLTFSSPREAFKVMQQPERIIDNRVVFLHFAVSQNLKKYQN 308
Query: 250 DGGG-PGNVSMNHGDGMGMV--------PPSAGGSYGGPGGHGYPFSGPP------PLGH 294
+ N + N+ + P P YP S P P G+
Sbjct: 309 NQNYVKKNQNFNYYQKNNLNNRNNFVRRTPMYHHENEAPNTFNYPVSFVPNVYTNVPHGY 368
Query: 295 HLN 297
LN
Sbjct: 369 QLN 371
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 313
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|387018108|gb|AFJ51172.1| Heterogeneous nuclear ribonucleoprotein A3-like [Crotalus
adamanteus]
Length = 225
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGALTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 68 DAAMSARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 125
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
YG+IE + D+Q+GK +GFA + + +V T++G + A +K+
Sbjct: 126 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 185
Query: 246 PMGPDGGGPGNVSMN 260
G+ S N
Sbjct: 186 QTATAQRSRGSSSSN 200
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 16/194 (8%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP K+FI GL W TT EGLR F YGE++E +V+ D T +S+G+GF+TF G
Sbjct: 18 DPC--KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFA 185
L + ++D + +A + P V+ +KIFVG + + + + + +F
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFE 130
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+G++++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+
Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFEVED-----IVEKVCEIHFHEINNKMVECKKAQ 185
Query: 246 P---MGPDGGGPGN 256
P M P G
Sbjct: 186 PKEVMSPTSSARGR 199
>gi|157831273|pdb|1HA1|A Chain A, Hnrnp A1 (Rbd1,2) From Homo Sapiens
Length = 184
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSARGR 199
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 82 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 137 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 191
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 192 SPTGSARGR 200
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 162
>gi|291402435|ref|XP_002717573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L HF
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRKALSKQ 184
>gi|395843943|ref|XP_003794730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Otolemur garnettii]
Length = 251
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM AL K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAL---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 16/194 (8%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP K+FI GL W TT EGLR F YGE++E +V+ D T +S+G+GF+TF G
Sbjct: 18 DPC--KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFA 185
L + ++D + +A + P V+ +KIFVG + + + + + +F
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFE 130
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+G++++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+
Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFEVED-----IVEKVCEIHFHEINNKMVECKKAQ 185
Query: 246 P---MGPDGGGPGN 256
P M P G
Sbjct: 186 PKEVMSPTSSARGR 199
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 18/194 (9%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
Q KLFI G+ W+TT E L FS +GE+ +A V+ DK TG+ +G+GF+ + AL
Sbjct: 5 QGKLFIGGISWETTEEKLHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDAAL 64
Query: 130 KEPSKKIDGRVT-----------VTNLAVAGNSGNST------NNPVDVSLRKIFVGNVP 172
EP +DGR + AV ++G +T N+ +KIFVG +P
Sbjct: 65 LEP-HTLDGRTVDVKRALSREEQQASKAVNPSTGRNTGGGGGGNDASGTRTKKIFVGGLP 123
Query: 173 NDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
+ ++ D+ +F +G + + + +D+ T +P+GF + + + L + GK
Sbjct: 124 SSLTDDEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGK 183
Query: 233 QLNCRLADNKKAKP 246
+ + A ++A P
Sbjct: 184 MVEVKRALPREANP 197
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 32 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 91
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 92 DAAMAARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 149
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
YG+IE + D+Q+GK +GFA + + +V T++G + A +K+
Sbjct: 150 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 209
Query: 246 PMGPDGGGPGNVSMN 260
G+ S N
Sbjct: 210 QTATAQRNRGSSSSN 224
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 16/225 (7%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D+ P RKLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK +
Sbjct: 50 DSPPGSRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 109
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR----------KIFVGNVPND 174
L +DGR P + + KIFVG +P++
Sbjct: 110 VGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHN 169
Query: 175 MSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL 234
+L +F +G + E + +D + +P+GF ++ + A+ + GK++
Sbjct: 170 CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKV 229
Query: 235 NCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ A+ + +K P G PG G ++P +A G G P
Sbjct: 230 EVKRAEPRDSKSQVP--GQPGASQW----GSRLMPNAANGWAGQP 268
>gi|402882999|ref|XP_003905018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Papio
anubis]
Length = 378
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 90 DAAMCARPHKVDGRVVEPKKAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 147
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
YG+IE + D+Q+GK GFA + + +V T++G NC + +
Sbjct: 148 KYGKIETIEVMEDRQSGKKTGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEVKKALSKQ 205
Query: 246 PMGP------DGGGPGN 256
M GGG GN
Sbjct: 206 EMQSAGSQRGHGGGSGN 222
>gi|410896922|ref|XP_003961948.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Takifugu rubripes]
Length = 336
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ + A +S+G+GF+T+ +
Sbjct: 8 EPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+K K+DGRV AV S +N P +S++KIFVG + D D++ +F
Sbjct: 68 DEAMKARPHKVDGRVVEPKRAV---SREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + ++ +GK +GF + + + T++ R A +K+
Sbjct: 125 EKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTINLHNCEVRKALSKQ 183
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 82 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 137 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 191
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 192 SPTGSARGR 200
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 162
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 127/312 (40%), Gaps = 47/312 (15%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDTT + FS YGE+ + VV+ + TGKS+G+GF+TFK L
Sbjct: 9 KIFVGGLSWDTTHATMLKYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKDPSCVKTVLAN 68
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+D R + S N + S RK+F+G +P++++ D++ HFA +GE++
Sbjct: 69 QPHVLDSR-QIDPKQCNPRSMNKGGKSAENSKRKVFMGGLPSNITEDEIKEHFAEFGEVQ 127
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDG 251
+ + D+ + +GF + E + + V GKQ+ C+ A ++ K M
Sbjct: 128 DVVIMVDQDKERSRGFGFLTFDCEESVEKVISQHYVPVKGKQVECKRAQPREMKLMADCA 187
Query: 252 GGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQVPSSMG 311
P S MG++P G P++ P SS+
Sbjct: 188 ALPSGFSAGGACSMGLIP-------------GTPYAFPA-----------------SSLP 217
Query: 312 GVGAGGYGAGLGGPYGGYG-------GPGSTGYGGLGGAGGGAGAGGALGGAAGGLG--- 361
G A GY Y G P T G + G+G G+ AA
Sbjct: 218 GAMAAGYPGAFTQAYPSQGLRLVSPSSPLVTLLGTMPGSGNAVSFPGSYQAAAAAAAAAA 277
Query: 362 ------GGSSLY 367
GGSS
Sbjct: 278 TPTMDLGGSSAL 289
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 40/54 (74%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
A+ ++RK+F+ GL + T + ++ F+ +GE+++ V+++D+ +S+G+GF+TF
Sbjct: 95 AENSKRKVFMGGLPSNITEDEIKEHFAEFGEVQDVVIMVDQDKERSRGFGFLTF 148
>gi|157834095|pdb|1UP1|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
Length = 182
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 7 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 66
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 67 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 123
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 124 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 182
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 16/194 (8%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP K+FI GL W TT EGLR F YGE++E +V+ D T +S+G+GF+TF G
Sbjct: 18 DPC--KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFA 185
L + ++D + +A + P V+ +KIFVG + + + + + +F
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFE 130
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+G++++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+
Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFEVED-----IVEKVCEIHFHEINNKMVECKKAQ 185
Query: 246 P---MGPDGGGPGN 256
P M P G
Sbjct: 186 PKEVMSPTSSARGR 199
>gi|410036104|ref|XP_525973.4| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Pan
troglodytes]
Length = 371
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 57 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 116
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 117 DAAMCARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 174
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 175 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 225
>gi|296209042|ref|XP_002751365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Callithrix jacchus]
Length = 375
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT E L+ FS YGE+ E V+ D TG+S+G+GF+TFK + + +
Sbjct: 169 KMFIGGLNWETTDESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFKDPKTVNIVMVK 228
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + +F +G +
Sbjct: 229 -EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATETDFREYFTQFGRVL 279
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + + AL P + K + KKA+P G
Sbjct: 280 DATLMMDKDTGRPRGFGFVTFDSEGAVENALNCPTLAILDKPIEV-----KKAQPRG 331
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ + T R F+ +G + +A +++DK TG+ +G+
Sbjct: 236 IIDPKRAIPRDEQEKTSKIFVGGVSQEATETDFREYFTQFGRVLDATLMMDKDTGRPRGF 295
Query: 115 GFITFKHIDGAMLALKEPSKKI-DGRVTVTNLAVAGNSGNSTNNPVD 160
GF+TF AL P+ I D + V GN N D
Sbjct: 296 GFVTFDSEGAVENALNCPTLAILDKPIEVKKAQPRGNIRERMNAHFD 342
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 16/212 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W+TT E L+ F YGE+ + VV+ + TG+S+G+GF+TF + AL+
Sbjct: 20 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 79
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDV-SLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+DGR + + S + P K+F+G +P +++ L + F+ YG +
Sbjct: 80 GPHTLDGRT----IDPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
E + +D++ K +GF ++ + A + + GKQ+ KKA+P D
Sbjct: 136 MEVVIMYDQEKKKSRGFGFLSFENEAAVERATAEHFVNISGKQVEI-----KKAEPR--D 188
Query: 251 GGGPGNVSMN---HGDGMGMVPPSAGGSYGGP 279
G G N SMN + G PP G GGP
Sbjct: 189 GSG-NNNSMNADSYQWGSPQAPPMGNGQMGGP 219
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT + L++ F +G++ + VV+ D T +S+G+GFIT+ H A K
Sbjct: 27 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQK 86
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D L +F YG I
Sbjct: 87 ARPHKIDGRVVEPKRAVPRQEIDSPN--AGATVKKLFVGALKDDHDEQSLRDYFQHYGSI 144
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P
Sbjct: 145 VDINIVMDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALP 195
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + LR F YG + + +++DK TGK +G+ F+ F D
Sbjct: 116 TVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 175
Query: 129 LKEPSKKIDGRVTVTNLAV 147
+ + +++G++ A+
Sbjct: 176 VLQKQHQLNGKMVDVKKAL 194
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
+RK+F+G + + D L AHF +G+I + + D +T + +GF Y + +++
Sbjct: 26 MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITY-----SHSSM 80
Query: 223 VDPIKTVDGKQLNCRLADNKKAKP 246
VD + +++ R+ + K+A P
Sbjct: 81 VDEAQKARPHKIDGRVVEPKRAVP 104
>gi|297676076|ref|XP_002815972.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Pongo abelii]
Length = 320
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
QRKLFI GL ++TT E LRS +G L + V+ D T S+G+GF+ + ++ A+
Sbjct: 13 QRKLFIGGLSFETTDESLRSHSEQWGMLTDCAVMRDPNTKHSRGFGFVIYATVEEVDTAM 72
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K+DGRV N AV+ +S ++++KIFVG + D L +F YG+
Sbjct: 73 NARPHKVDGRVVEPNRAVS--REDSQRPDAHLTVKKIFVGGIKEDTEEHHLRHYFEQYGK 130
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
IE + D+ +GK +GFA + + ++ TV+G R A
Sbjct: 131 IEVIEIMTDQGSGKKRGFAFVTFDDHDSLDKTVIQKYHTVNGHNCEVRKA 180
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
DA T +K+F+ G+ DT LR F YG++E ++ D+ +GK +G+ F+TF D
Sbjct: 99 DAHLTVKKIFVGGIKEDTEEHHLRHYFEQYGKIEVIEIMTDQGSGKKRGFAFVTFDDHDS 158
Query: 125 AMLALKEPSKKIDGRVTVTNLAVA 148
+ + ++G A++
Sbjct: 159 LDKTVIQKYHTVNGHNCEVRKALS 182
>gi|5542530|pdb|2UP1|A Chain A, Structure Of Up1-Telomeric Dna Complex
gi|39654500|pdb|1PO6|A Chain A, Crystal Structure Of Up1 Complexed With
D(Tagg(6mi)ttaggg): A Human Telomeric Repeat Containing
6-Methyl-8-(2-Deoxy-
Beta-Ribofuranosyl)isoxanthopteridine (6mi)
Length = 183
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 2 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 61
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 62 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 118
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 119 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 177
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|357151715|ref|XP_003575880.1| PREDICTED: uncharacterized protein LOC100834641 [Brachypodium
distachyon]
Length = 419
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 28/183 (15%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
DA + R++F+ GL L + FSA+G L + V+ A G+ KGYGF+TFK
Sbjct: 92 DASLSHRRVFVHGLPPRADGPALEAAFSAFGPLADCHVV---AAGRCKGYGFLTFKSHAA 148
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAG--NSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
A A+ P A AG SG S R+++V NV D S ++L
Sbjct: 149 ARRAVCAPW-----------FACAGPDRSGASAVG------RRVYVANVGPDASVERLRT 191
Query: 183 HFACYGEIEEGPLGFD----KQTGKPKG--FALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
FA +GE+E GP G D +TG+P+ ++LFVY+ AEGA+ A+ P + +G+ L C
Sbjct: 192 FFAGFGELEGGPFGLDVDGEAETGRPRSQRYSLFVYREAEGARKAVEQPYRVFEGRTLRC 251
Query: 237 RLA 239
+LA
Sbjct: 252 QLA 254
>gi|296209046|ref|XP_002751367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Callithrix jacchus]
Length = 320
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 66 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 123
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V +S + P RKIFVG +P +S D L HF+ YG
Sbjct: 124 --EDEHNIDGRTVEVKRTVPREEMSSKDGP---KTRKIFVGGLPASLSEDDLRDHFSSYG 178
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
++ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 179 KVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 234
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ GL + + LR FS+YG++ E +++D +TG+S+G+GF+TF+ D
Sbjct: 151 PKTRKIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVER 210
Query: 128 ALKE 131
+ E
Sbjct: 211 VISE 214
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F YG++ EA+V+ D T +S+G+GF+TF + L +
Sbjct: 40 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 99
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DG+ +A + +P V+ +KIFVG + + + + ++F +G I
Sbjct: 100 GTHELDGKKVDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 154
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P
Sbjct: 155 EDAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP 205
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++S F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 128 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 180
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 19/189 (10%)
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
I+D P K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK
Sbjct: 146 ECISDDAPD--KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFK 203
Query: 121 HIDGA-MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADK 179
+ +KE +DG++ A+ + T+ KIFVG V + +
Sbjct: 204 DPKTVNTVMVKE--HYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQEATEQD 253
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
F +G + + L DK +G+P+GF + + +A L P++ + GK +
Sbjct: 254 FKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL-GKPIEV--- 309
Query: 240 DNKKAKPMG 248
KKA+P G
Sbjct: 310 --KKAQPRG 316
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ + T + + F +G + +A +++DK +G+ +G+
Sbjct: 222 IIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGF 281
Query: 115 GFITF 119
GF+TF
Sbjct: 282 GFVTF 286
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 92 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 149
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+ IDGR V +S + P RKIFVG +P ++ DKL HF+ YG
Sbjct: 150 --QDEHTIDGRTVEVKRTVPREEMSSKDGP---KTRKIFVGGIPPSLTEDKLKEHFSSYG 204
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKKAKPM 247
++ E + D TG+ +GF ++ + + + + + + GKQ+ KKA+P
Sbjct: 205 KVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEI-----KKAEPK 259
Query: 248 GPDGG 252
P GG
Sbjct: 260 KPGGG 264
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ G+ T + L+ FS+YG++ E ++LD TG+S+G+GF+TF++ D
Sbjct: 177 PKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVER 236
Query: 128 ALKE 131
+ E
Sbjct: 237 VMSE 240
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 103
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V +S + P RKIFVG +P +S D L HF+ YG
Sbjct: 104 --EDEHNIDGRTVEVKRTVPREEMSSKDGP---KTRKIFVGGLPASLSEDDLRDHFSSYG 158
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
++ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 159 KVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 214
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ GL + + LR FS+YG++ E +++D +TG+S+G+GF+TF+ D
Sbjct: 131 PKTRKIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVER 190
Query: 128 ALKE 131
+ E
Sbjct: 191 VISE 194
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 16/219 (7%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 7 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 66
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKL 180
+DGR P + KIFVG +P++ +L
Sbjct: 67 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 126
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 127 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 186
Query: 241 NKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 187 PRDSKSQAP--GQPGASQW----GSRVVPSAANGWAGQP 219
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 161 VSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQA 220
V+ RK+FVG + + + L ++F+ YGE+ + + DK T + +GF +K
Sbjct: 4 VNCRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 63
Query: 221 ALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
L T+DG+ ++ KP P G P G
Sbjct: 64 VLASRPHTLDGRNID--------PKPCTPRGMQPERTRPKEG 97
>gi|390474589|ref|XP_002757922.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Callithrix jacchus]
Length = 320
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQPRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ +DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 69 DAAVNARPHNVDGRVVEPKRAVSRE--DSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFE 126
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK + FA + + ++ TV+G R A +K+
Sbjct: 127 QYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|390474591|ref|XP_002757923.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Callithrix jacchus]
Length = 339
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQPRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ +DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 69 DAAVNARPHNVDGRVVEPKRAVSRE--DSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFE 126
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK + FA + + ++ TV+G R A +K+
Sbjct: 127 QYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 16/219 (7%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 63 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 122
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKL 180
+DGR P + KIFVG +P++ +L
Sbjct: 123 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 182
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 183 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 242
Query: 241 NKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 243 PRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 275
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 29 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 86
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+ IDGR V +S + P RKIFVG +P ++ DKL HF+ YG
Sbjct: 87 --QDEHTIDGRTVEVKRTVPREEMSSKDGP---KTRKIFVGGIPPSLTEDKLKEHFSSYG 141
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKKAKPM 247
++ E + D TG+ +GF ++ + + + + + + GKQ+ KKA+P
Sbjct: 142 KVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEI-----KKAEPK 196
Query: 248 GPDGG 252
P GG
Sbjct: 197 KPGGG 201
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ G+ T + L+ FS+YG++ E ++LD TG+S+G+GF+TF++ D
Sbjct: 114 PKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVER 173
Query: 128 ALKE 131
+ E
Sbjct: 174 VMSE 177
>gi|115469006|ref|NP_001058102.1| Os06g0622900 [Oryza sativa Japonica Group]
gi|51090851|dbj|BAD35379.1| putative SEB4D [Oryza sativa Japonica Group]
gi|51091028|dbj|BAD35670.1| putative SEB4D [Oryza sativa Japonica Group]
gi|113596142|dbj|BAF20016.1| Os06g0622900 [Oryza sativa Japonica Group]
Length = 275
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F AYGE+ EAVVI D+ATG+SKGYGF+TF+ D A
Sbjct: 29 DTTYTKVFVGGLAWETRSEGLRAHFEAYGEILEAVVITDRATGRSKGYGFVTFRDPDSAR 88
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSG 152
+A +P IDGR NLA+ G G
Sbjct: 89 MACMDPYPVIDGRRANCNLAILGRPG 114
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YGEI E + D+ TG+ KG+ ++ + A+
Sbjct: 29 DTTYTKVFVGGLAWETRSEGLRAHFEAYGEILEAVVITDRATGRSKGYGFVTFRDPDSAR 88
Query: 220 AALVDPIKTVDGKQLNCRLA 239
A +DP +DG++ NC LA
Sbjct: 89 MACMDPYPVIDGRRANCNLA 108
>gi|75517570|gb|AAI03708.1| HNRPA1 protein [Homo sapiens]
Length = 267
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|344255674|gb|EGW11778.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Cricetulus griseus]
Length = 340
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|56753309|gb|AAW24858.1| SJCHGC06087 protein [Schistosoma japonicum]
gi|226469806|emb|CAX70184.1| Heterogeneous nuclear ribonucleoprotein D0 [Schistosoma japonicum]
Length = 390
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 21/184 (11%)
Query: 62 SIADA-DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S+ D D RKLF+ GL W+T L+ FS +G++ + ++ LD+ TG S+G+GF+T +
Sbjct: 49 SVTDENDDDSRKLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLE 108
Query: 121 HID--GAMLALKE---PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDM 175
D +L++ E +KKID + P LRKIFVG + ++
Sbjct: 109 SEDCVSKVLSVSEHWLKNKKIDPKKA---------------KPSREPLRKIFVGGIDPEV 153
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ D++ +F+ +G++E L +D Q GK K + + T A+ A+ + + G+Q +
Sbjct: 154 TEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAARKAISKERQEIFGRQCD 213
Query: 236 CRLA 239
R+A
Sbjct: 214 VRVA 217
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RK+F+ G+ + T + +R FS++G++E + D GK K Y F++F A A+
Sbjct: 142 RKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAARKAIS 201
Query: 131 EPSKKIDGRVTVTNLAVAGNSGN 153
+ ++I GR +AV + N
Sbjct: 202 KERQEIFGRQCDVRVAVTRDQAN 224
>gi|1710623|sp|P51989.1|RO21_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 1;
AltName: Full=hnRNP A2(A)
gi|214741|gb|AAA49948.1| ribonucleoprotein [Xenopus laevis]
Length = 346
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LR+ + +G L + VV+ D A+ +S+G+GF+TF ++ A+
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMA 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGRV AVA S V+++K+FVG + D L +F YG+I
Sbjct: 69 TRPHTIDGRVVEPKRAVAREE--SAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKI 126
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+ + DKQ+GK +GFA + + ++ T++G R A +K+
Sbjct: 127 DSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I DK +
Sbjct: 78 VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+ F+TF D
Sbjct: 138 GKKRGFAFVTFDDHD 152
>gi|226487556|emb|CAX74648.1| Heterogeneous nuclear ribonucleoprotein D0 [Schistosoma japonicum]
Length = 389
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 21/184 (11%)
Query: 62 SIADA-DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S+ D D RKLF+ GL W+T L+ FS +G++ + ++ LD+ TG S+G+GF+T +
Sbjct: 49 SVTDENDDDSRKLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLE 108
Query: 121 HID--GAMLALKE---PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDM 175
D +L++ E +KKID + P LRKIFVG + ++
Sbjct: 109 SEDCVSKVLSVSEHWLKNKKIDPKKA---------------KPSREPLRKIFVGGIDPEV 153
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ D++ +F+ +G++E L +D Q GK K + + T A+ A+ + + G+Q +
Sbjct: 154 TEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAARKAISKERQEIFGRQCD 213
Query: 236 CRLA 239
R+A
Sbjct: 214 VRVA 217
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RK+F+ G+ + T + +R FS++G++E + D GK K Y F++F A A+
Sbjct: 142 RKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAARKAIS 201
Query: 131 EPSKKIDGRVTVTNLAVAGNSGN 153
+ ++I GR +AV + N
Sbjct: 202 KERQEIFGRQCDVRVAVTRDQAN 224
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT + LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D ++
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGRV AVA S V+++K+FVG + D L +F YG+I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREE--SAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKI 126
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + DKQ+GK +GF + + ++ T++G R A +K+
Sbjct: 127 ESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG++E +I DK +
Sbjct: 78 VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQS 137
Query: 109 GKSKGYGFITF 119
GK +G+GF+TF
Sbjct: 138 GKKRGFGFVTF 148
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT + LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D ++
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGRV AVA S V+++K+FVG + D L +F YG+I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREE--SAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKI 126
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + DKQ+GK +GF + + ++ T++G R A +K+
Sbjct: 127 ESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG++E +I DK +
Sbjct: 78 VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQS 137
Query: 109 GKSKGYGFITF 119
GK +G+GF+TF
Sbjct: 138 GKKRGFGFVTF 148
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT + LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D ++
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGRV AVA S V+++K+FVG + D L +F YG+I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREE--SAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKI 126
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + DKQ+GK +GF + + ++ T++G R A +K+
Sbjct: 127 ESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG++E +I DK +
Sbjct: 78 VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQS 137
Query: 109 GKSKGYGFITF 119
GK +G+GF+TF
Sbjct: 138 GKKRGFGFVTF 148
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT + LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D ++
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGRV AVA S V+++K+FVG + D L +F YG+I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREE--SAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKI 126
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + DKQ+GK +GF + + ++ T++G R A +K+
Sbjct: 127 ESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG++E +I DK +
Sbjct: 78 VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQS 137
Query: 109 GKSKGYGFITF 119
GK +G+GF+TF
Sbjct: 138 GKKRGFGFVTF 148
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 16/219 (7%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 35 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 94
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKL 180
+DGR P + KIFVG +P++ +L
Sbjct: 95 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 154
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 155 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 214
Query: 241 NKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 215 PRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 247
>gi|428673104|gb|EKX74017.1| conserved hypothetical protein [Babesia equi]
Length = 359
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 63 IADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHI 122
+ D+D K+F GL TT E L+S FS YGE+ + ++ DK TGKS+G+GF+TF +
Sbjct: 11 LTDSDFETHKIFAGGLNRATTAEDLKSYFSKYGEVVHSEIVGDKVTGKSRGFGFVTFSNE 70
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D A+ A+ + K+D V LAV + P D +IFVG V +++ +
Sbjct: 71 D-AIRAVLSKTHKLDNVVVDVKLAVRKDRAKQLLPPKD-EYSRIFVGGVSENITEEYFKE 128
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
+F+ YG I DK T +P+GF +Y+ +E A+
Sbjct: 129 YFSRYGHITSYNYIVDKDTNRPRGFGFVIYEKSEDCDKAI 168
>gi|121715226|ref|XP_001275222.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
gi|119403379|gb|EAW13796.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
Length = 466
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALKE 131
+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK + +KE
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + + F +G +
Sbjct: 61 --HYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQEFKGFFMQFGRVV 110
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + + AL P+ + GK + KKA+P G
Sbjct: 111 DATLMIDKDTGRPRGFGFVTFDSEAAVENALSRPL-AICGKPIEV-----KKAQPRG 161
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 45 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQEKTSKIFVGGVSQEAT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ + F +G + +A +++DK TG+ +G+GF+TF AL P
Sbjct: 96 EQEFKGFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVENALSRP 144
>gi|391332836|ref|XP_003740835.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Metaseiulus occidentalis]
Length = 396
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 63 IADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHI 122
+ D K+F+ GL WDTT EGL+S F +GE+ + VV+ ++ G+S+G+GF+TFK
Sbjct: 1 MVDDKDVLSKMFVGGLSWDTTKEGLQSYFCRFGEIVDCVVMTNE-QGRSRGFGFVTFKDP 59
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
+ + +ID RV KIFVG +P ++ ++L
Sbjct: 60 QVVQVVCQGGPHRIDNRVVDPKPCNPRGGPGKGGGKRGRGYPKIFVGGLPTSLTENELKM 119
Query: 183 HFA-CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
F YG++ E + +D++ K +GF ++ + A D +++GKQ+ C+ A
Sbjct: 120 FFQEHYGDVFEVVIMYDQERRKSRGFGFVSFENDDAVDRACRDHYVSINGKQVECKRAQP 179
Query: 242 K 242
+
Sbjct: 180 R 180
>gi|49402291|ref|NP_956398.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|27882514|gb|AAH44442.1| Heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
Length = 422
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR+ F +G L + VV+ D T +S+G+GF+T+ +D
Sbjct: 28 EPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDEV 87
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
++ K+DGR+ AV+ +S+ +++KIFVG + +D + L +F
Sbjct: 88 NASMDARPHKVDGRLVEPKRAVS--REDSSKPFAHTTVKKIFVGGIKDDTEENHLRDYFD 145
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+G+IE + D +TG +GFA + + ++ TV+G R A +K+
Sbjct: 146 QFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKALSKQ 203
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 18/194 (9%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
Q KLFI G+ W+TT E L FSAYGE+ +A V+ DK TG+ +G+GF+ F AL
Sbjct: 5 QGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDRAL 64
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTN--NP---------------VDVSLRKIFVGNVP 172
++P +DGR A++ ++ NP +KIFVG +P
Sbjct: 65 QDP-HTLDGRTVDVKRALSREEQQASKAANPSGGRNTGGGNGGGDANGARTKKIFVGGLP 123
Query: 173 NDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
+ ++ D +F +G + + + +D+ T +P+GF + + + L + GK
Sbjct: 124 STLTEDGFRQYFQTFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDHVLQKTFHDLGGK 183
Query: 233 QLNCRLADNKKAKP 246
+ + A ++A P
Sbjct: 184 LVEVKRALPREANP 197
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 9/175 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F+ YG++ E +V+ D T +S+G+GFITF L +
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+ ++DG+ +A T+ + +KIFVG + + + + +F +G IE
Sbjct: 83 GNHELDGKKIDPKVAFP----RRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIE 138
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P
Sbjct: 139 DAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP 188
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|224129580|ref|XP_002320621.1| predicted protein [Populus trichocarpa]
gi|222861394|gb|EEE98936.1| predicted protein [Populus trichocarpa]
Length = 183
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 10/186 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA-LK 130
KLFI G+ WDTT E LR F+ YGE+ + V++ DK TG+ +G+GF+ F D ++L +
Sbjct: 4 KLFIGGIAWDTTEETLRDHFNLYGEVSQVVIMRDKTTGRPRGFGFVVFS--DPSLLDPVL 61
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ IDGR +T +S +S + KIFVG +P + D +F YG +
Sbjct: 62 QDKHTIDGRSVMT--LSPFSSNSSNFLFCNFRTNKIFVGGLPPTLMEDAFRQYFQSYGHV 119
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ L +D+QT +P+GF + T + VD + +LN +L + K+A P +
Sbjct: 120 CDVVLMYDQQTQRPRGFGFITFDTEDA-----VDNVLQKTFHELNGKLVEVKRALPKDAN 174
Query: 251 GGGPGN 256
GG G
Sbjct: 175 PGGEGR 180
>gi|157423039|gb|AAI53535.1| Dazap1 protein [Danio rerio]
Length = 385
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 27/289 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR+ FS YGE+ + V++ DK+T +S+G+GF+ FK + L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 132 PSKKIDGRVT---------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
+DGR + G + +KIFVG +P++ +L
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRD 131
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+ +
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 243 KAK-----PMGPDGGGPGNVSMNHGDGMGMVP-PSAGGSYGGPG---GHGYPFSGPPPLG 293
+K +G + GP + ++ +G P P+ SYG G G P +G G
Sbjct: 192 DSKAPAPGQLGANQWGPRAI-ISAANGWAAQPAPTWQQSYGPQGVWVSTGQPLAG---YG 247
Query: 294 HHLNSSLGGPGQVPSSMGGV-----GAGGYGAGLGGPYGGYGGPGSTGY 337
L + G P Q PS GG+GA G P G+ GY
Sbjct: 248 PPLPAGRGAPAQAPSPFNAFLVAAPPTGGFGAPQGYPQQGFSTQPQFGY 296
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 10/184 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ F ++GE+ EAV++ D+ TG+++G+GF+ F A +KE
Sbjct: 7 KLFIGGISWDTDEERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL---------RKIFVGNVPNDMSADKLLA 182
IDGR+ AV + N N S+ +KIFVG + + ++ +
Sbjct: 67 K-HSIDGRMVEAKKAVPRDDQNILNRNSGGSIHSSPGPGRTKKIFVGGLASTVTENDFKN 125
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G I + + +D T +P+GF + + E L+ ++GK + + A K
Sbjct: 126 YFDQFGTIIDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLMRTFHELNGKMVEVKRAVPK 185
Query: 243 KAKP 246
+ P
Sbjct: 186 ELSP 189
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPT-----QRKLFIRGLGWDTTTE 85
R I E+ + D + AV R D + + S + +K+F+ GL T
Sbjct: 62 RVIKEKHSIDGRMVEAKKAVPRDDQNILNRNSGGSIHSSPGPGRTKKIFVGGLASTVTEN 121
Query: 86 GLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNL 145
++ F +G + + VV+ D T + +G+GFITF + L +++G++
Sbjct: 122 DFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLMRTFHELNGKMVEVKR 181
Query: 146 AV 147
AV
Sbjct: 182 AV 183
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 21/197 (10%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
Q KLFI G+ W+TT E L FSAYGE+ +A V+ DK TG+ +G+GF+ F AL
Sbjct: 5 QGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDRAL 64
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTN--NP------------------VDVSLRKIFVG 169
++P +DGR A++ ++ NP +KIFVG
Sbjct: 65 QDP-HTLDGRTVDVKRALSREEQQASKAANPSGGRNSGGGGGGGGGSDASGARTKKIFVG 123
Query: 170 NVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTV 229
+P+ ++ D +F +G + + + +D+ T +P+GF + + + L +
Sbjct: 124 GLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLQKTFHDL 183
Query: 230 DGKQLNCRLADNKKAKP 246
GK + + A ++A P
Sbjct: 184 GGKLVEVKRALPREANP 200
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F YG+IE + D+Q+GK +GFA + + +V T++G + A +K
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEVKKALSK 204
Query: 243 K 243
+
Sbjct: 205 Q 205
>gi|440905636|gb|ELR55990.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 180
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 1 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEG 60
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 61 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 117
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 118 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 176
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 67 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 124
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V +S + P RKIFVG +P+ ++ D+L HF+ YG
Sbjct: 125 --EDEHVIDGRTVEVKRTVPREEMSSKDGP---KTRKIFVGGLPSSLTEDELREHFSPYG 179
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+I E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 180 KIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 235
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ GL T + LR FS YG++ E ++LD +TG+S+G+GF+TF+ D
Sbjct: 152 PKTRKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVER 211
Query: 128 ALKE 131
+ E
Sbjct: 212 VISE 215
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT E L+ FS +GE+ E V+ D A+G+S+G+GF+TFK + + +
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVK- 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V + + +F +G + +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQEATEQDFKQYFMQFGRVVD 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
L DK TG+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 112 ATLMMDKDTGRPRGFGFVTFDSEAAVEACLEGPLEIL-GKPIEV-----KKAQPRG 161
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DAR + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 45 LTFKDARTVNIVMVKEHYLD---------GKIIDPKRAIPRDEQERTSKIFVGGVSQEAT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF L+ P + + + V
Sbjct: 96 EQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEGPLEILGKPIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|66911597|gb|AAH97855.1| LOC496375 protein [Xenopus laevis]
Length = 286
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 19/174 (10%)
Query: 65 DADPTQR---KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
DA T+ K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK
Sbjct: 20 DASKTEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 79
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLL 181
+G +++ K++G+V A A T PV +KIFVG + D DK+
Sbjct: 80 SEGVDKVMEQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEDKIR 131
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+F +GE+E L D +T K +GF +K DP+K + K+ +
Sbjct: 132 EYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEE--------DPVKNIMEKKYH 177
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 16/245 (6%)
Query: 45 VLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVIL 104
+ + V+ VL S D RKLF+ GL W TT E LRS FS YGE+ + V++
Sbjct: 67 CVPAVVSDAGSVLGSQTYPVDVMAEARKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMK 126
Query: 105 DKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVD---- 160
DK T +S+G+GF+ FK + L +DGR P +
Sbjct: 127 DKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQK 186
Query: 161 ------VSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKT 214
KIFVG +P++ +L +F +G + E + +D + +P+GF ++
Sbjct: 187 GPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 246
Query: 215 AEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGG 274
+ A+ + GK++ + A+ + +K P G PG G +VP +A G
Sbjct: 247 EQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQPP--GQPGASQW----GSRVVPNAANG 300
Query: 275 SYGGP 279
G P
Sbjct: 301 WAGQP 305
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W T++E LR F +G + + +++ D T +S+G+GFITF+ LK
Sbjct: 60 KLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVENVLKV 119
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
P +DG+ A G + +KIFVG V D S+D++ +F+ +G++E
Sbjct: 120 PVHTLDGKKIDPKHATPKGRGKTNGKT-----KKIFVGGVSQDTSSDEVKVYFSQFGKVE 174
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
E + D+QT + +GF ++ E + K++ C+ A
Sbjct: 175 EAVMLMDQQTKRHRGFGFVTFENEETVDRVCEIHFHNIKNKKVECKKA 222
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 41/51 (80%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
+K+F+ G+ DT+++ ++ FS +G++EEAV+++D+ T + +G+GF+TF++
Sbjct: 147 KKIFVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKRHRGFGFVTFEN 197
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 148 AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGF 207
+GN G+S+ + K+FVG + S++KL +F +G I + + D T + +GF
Sbjct: 43 SGNEGSSSPGADSTAAGKLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGF 102
Query: 208 ALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
++ + L P+ T+DGK++ D K A P G
Sbjct: 103 GFITFEEPSSVENVLKVPVHTLDGKKI-----DPKHATPKG 138
>gi|148227150|ref|NP_001088992.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus laevis]
gi|52082714|gb|AAU25946.1| p37 AUF1 [Xenopus laevis]
Length = 295
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 19/194 (9%)
Query: 45 VLSSAVARHDDVLESVRSIADADPTQR---KLFIRGLGWDTTTEGLRSIFSAYGELEEAV 101
++ + A +++ ++ DA T+ K+FI GL WDTT + L+ FS +GE+ +
Sbjct: 9 MMEATTAETEEIGQNEGVKIDASKTEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCT 68
Query: 102 VILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDV 161
+ LD TG+S+G+GF+ FK +G +++ K++G+V A A T PV
Sbjct: 69 LKLDPITGRSRGFGFVLFKESEGVDKVMEQKEHKLNGKVIDPKRAKA----MKTKEPV-- 122
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
+KIFVG + D DK+ +F +GE+E L D +T K +GF +K
Sbjct: 123 --KKIFVGGLSPDTPEDKIREYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEE------ 174
Query: 222 LVDPIKTVDGKQLN 235
DP+K + K+ +
Sbjct: 175 --DPVKNIMEKKYH 186
>gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella zeae PH-1]
Length = 552
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR F+ +GE+ E V+ D +TG+S+G+GF+TFK + + +
Sbjct: 122 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK 181
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ + L + + S KIFVG V + + + +FA +G +
Sbjct: 182 -EHFLDGKILIL-LQIDPKRAIPRDEQEKTS--KIFVGGVSQETTDQEFKEYFAQFGRVV 237
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF ++ G A + P++ + GK + KKA+P G
Sbjct: 238 DATLMMDKDTGRPRGFGFVTFENEAGVDACINVPLE-IHGKPIEV-----KKAQPRG 288
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD + + ++ R+I D K+F+ G+ +TT
Sbjct: 167 LTFKDAKTVNIVMVKEHFLDGKILILLQ----IDPKRAIPRDEQEKTSKIFVGGVSQETT 222
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ + F+ +G + +A +++DK TG+ +G+GF+TF++ G + P
Sbjct: 223 DQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINVP 271
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR F+ +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F YG++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFEIED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 6 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 65
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 66 DAAMSARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFE 123
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 124 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 174
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F YG++ EA+V+ D T +S+G+GF+TF + L +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DG+ +A + +P V+ +KIFVG + + + + ++F +G I
Sbjct: 90 GTHELDGKKVDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 144
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P
Sbjct: 145 EDAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP 195
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++S F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 170
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 28 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 87
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 88 DAAMSARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFE 145
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 146 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 196
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR F+ +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F YG++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFEIED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|148227778|ref|NP_001080390.1| heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Xenopus
laevis]
gi|28302301|gb|AAH46692.1| Hnrpa2b1 protein [Xenopus laevis]
Length = 346
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LR+ + +G L + VV+ D A+ +S+G+GF+TF ++ A+
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMA 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGRV AVA S V+++K+FVG + D L +F YG+I
Sbjct: 69 TRPHTIDGRVVEPKRAVAREE--SAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKI 126
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+ + DKQ+GK +GFA + + ++ T++G R A +K+
Sbjct: 127 DSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I DK +
Sbjct: 78 VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+ F+TF D
Sbjct: 138 GKKRGFAFVTFDDHD 152
>gi|148230657|ref|NP_001081318.1| heterogeneous nuclear ribonucleoprotein A3 homolog 1 [Xenopus
laevis]
gi|1710625|sp|P51968.1|RO31_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 1;
AltName: Full=hnRNP A3(A)
gi|214745|gb|AAA49949.1| ribonucleoprotein [Xenopus laevis]
Length = 373
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G+L + VV+ D T +S+G+GF+T+ ++
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
++ K+DGRV AV+ +S ++++KIFVG + D L +
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSRE--DSARPGAHLTVKKIFVGGIKEDTEEYHLRDYSE 139
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+Q+GK +GFA + + +V T++G + A +K+
Sbjct: 140 SYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQ 197
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F YG++ EA+V+ D T +S+G+GF+TF + L +
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DG+ +A + +P V+ +KIFVG + + + + ++F +G I
Sbjct: 104 GTHELDGKKVDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 158
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P
Sbjct: 159 EDAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP 209
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++S F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 184
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
RK+FI GL + TT E L++ F +GE+ + VV+ D T +S+G+GFIT+ A
Sbjct: 16 VHRKIFIGGLNYRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYSKAHMVDDA 75
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
ID RV T AVA + N ++RK+F+G + +D + D+L +F+ YG
Sbjct: 76 QNNRPHTIDSRVVETKRAVA--RQDIKNPEAGATVRKLFIGGIKDDHTEDQLREYFSNYG 133
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
++ + DK TGK +GF + + ++ ++GKQL+ + A
Sbjct: 134 NVQNVSIVTDKATGKKRGFGFVEFDDYDPVDKVCLNAPHKINGKQLDVKKA 184
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 56 VLESVRSIADAD-------PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E+ R++A D T RKLFI G+ D T + LR FS YG ++ ++ DKAT
Sbjct: 87 VVETKRAVARQDIKNPEAGATVRKLFIGGIKDDHTEDQLREYFSNYGNVQNVSIVTDKAT 146
Query: 109 GKSKGYGFITFKHIDGAMLALKEPSKKIDGR 139
GK +G+GF+ F D KI+G+
Sbjct: 147 GKKRGFGFVEFDDYDPVDKVCLNAPHKINGK 177
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 9/175 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F+ YG++ E +V+ D T +S+G+GFITF L +
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+ ++DG+ +A T+ + +KIFVG + + + + +F +G IE
Sbjct: 83 GNHELDGKKIDPKVAFP----RRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIE 138
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P
Sbjct: 139 DAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP 188
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E +++ F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 163
>gi|148666221|gb|EDK98637.1| mCG119114, isoform CRA_a [Mus musculus]
Length = 357
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 58 ESVRSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
E+ S + + Q RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF
Sbjct: 51 EATESAMEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 110
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDM 175
+TF + A+ IDGRV AVA + P V+++K+FVG + D
Sbjct: 111 VTFSSMAEVDAAMAARPHSIDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDT 167
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
L +F YG+I+ + D+Q+GK +GF + + ++ T++G
Sbjct: 168 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 227
Query: 236 CRLADNKK 243
R A +++
Sbjct: 228 VRKALSRQ 235
>gi|410954614|ref|XP_003983958.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Felis catus]
Length = 301
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 60 VRSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
+S + +P Q RKLFI GL ++TT E LRS F +G + + VV+ D T +S+G+GF+T
Sbjct: 2 FKSESPKEPEQLRKLFIGGLSFETTNESLRSHFEQWGTITDCVVMRDPNTKRSRGFGFVT 61
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+ ++ A+ + K+DGRV AV +S +++ KIFVG + D
Sbjct: 62 YATVEEVDAAMNARAHKVDGRVVEPKRAVL--REDSQRPGAHLTVTKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GF + + + TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDQGSGKKRGFPFVTFDDHDSVDKIAIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ G+ WDT E L+ F ++G++ EAV++ D+ TG+++G+GFI F A +KE
Sbjct: 7 KLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADRVIKE 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNS-TNNPVDV--------SLRKIFVGNVPNDMSADKLLA 182
IDGR+ A+ + N + N V RKIFVG + + ++
Sbjct: 67 -KHNIDGRMVEAKRAIPRDDQNIPSRNSVSSMHGSPGPDHTRKIFVGGLASTVTESDFKN 125
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G I + + +D T +P+GF Y + E L ++GK + + A K
Sbjct: 126 YFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTKTFHELNGKMVEVKRAVPK 185
Query: 243 KAKP 246
+ P
Sbjct: 186 ELSP 189
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPT-----QRKLFIRGLGWDTTTE 85
R I E+ D + A+ R D + S S++ + RK+F+ GL T
Sbjct: 62 RVIKEKHNIDGRMVEAKRAIPRDDQNIPSRNSVSSMHGSPGPDHTRKIFVGGLASTVTES 121
Query: 86 GLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNL 145
++ F +G + +AVV+ D T + +G+GFIT+ + L + +++G++
Sbjct: 122 DFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTKTFHELNGKMVEVKR 181
Query: 146 AV 147
AV
Sbjct: 182 AV 183
>gi|109098438|ref|XP_001091114.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
gi|109098440|ref|XP_001091244.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 4 [Macaca mulatta]
gi|297263360|ref|XP_002798798.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 320
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + V + D T +S+G+ F+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVAMRDPNTKRSRGFRFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKTAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W T+ + LR F YG + + V+ D T +S+G+GFITF L
Sbjct: 24 KLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDRVLAV 83
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
P+ +DG+ A N G +T + +K+FVG V D SAD++ A+F +G +E
Sbjct: 84 PAHTLDGKKIDPKHATPKNKGKATPSS---KTKKVFVGGVSQDTSADEVKAYFNQFGRVE 140
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
E + D+QT + +GF +++ + T+ K++ C+ A K+A
Sbjct: 141 EAVMLMDQQTKRHRGFGFVTFESEDVVDRICEIHYHTIKNKKVECKKAQPKEA 193
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 145 LAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKP 204
LA+ +S + + P D+ K+FVG + SADKL +F YG I + + D T +
Sbjct: 4 LALDQSSSSGRSTPTDLPHNKLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRS 63
Query: 205 KGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+GF + A L P T+DGK+++
Sbjct: 64 RGFGFITFAEASSVDRVLAVPAHTLDGKKID 94
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 36 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 95
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 96 DAAMSARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFE 153
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 154 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 204
>gi|47214361|emb|CAG01206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 256
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +G++ + + +D+ TG+S+G+GFI FK L++
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFNKFGDVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K+DGRV A+A PV +K+FVG + D S + + +F +GEIE
Sbjct: 61 KEHKLDGRVIDPKRALA-----MKKEPV----KKVFVGGLNPDTSKEVIQEYFEEFGEIE 111
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF YK + AL + TV G + ++A K+
Sbjct: 112 NIELPQDPKTEKRRGFVFITYKEEACVKKALENKFHTVGGSKCEIKIAQPKEV 164
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 56 VLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYG 115
V++ R++A +K+F+ GL DT+ E ++ F +GE+E + D T K +G+
Sbjct: 69 VIDPKRALAMKKEPVKKVFVGGLNPDTSKEVIQEYFEEFGEIENIELPQDPKTEKRRGFV 128
Query: 116 FITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
FIT+K AL+ + G +A
Sbjct: 129 FITYKEEACVKKALENKFHTVGGSKCEIKIA 159
>gi|417409751|gb|JAA51367.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 328
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 21 SPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGW 80
SP R+ P+ R + R + + SA+ R + RKLFI GL +
Sbjct: 1 SPARVRPR--RAVSSRSAAGNRAEATESAMEREKEQF-------------RKLFIGGLSF 45
Query: 81 DTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAMLALKEPSKKID 137
+TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM A ID
Sbjct: 46 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHS---ID 102
Query: 138 GRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLG 196
GRV AVA + P V+++K+FVG + D L +F YG+I+ +
Sbjct: 103 GRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEII 159
Query: 197 FDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
D+Q+GK +GF + + ++ T++G R A
Sbjct: 160 TDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 202
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F YG++ EA+V+ D T +S+G+GF+TF + L +
Sbjct: 31 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 90
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DG+ +A + +P V+ +KIFVG + + + + ++F +G I
Sbjct: 91 GTHELDGKKVDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 145
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P
Sbjct: 146 EDAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP 196
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++S F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 119 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 171
>gi|410914854|ref|XP_003970902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 307
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + D +G+S+G+GF+ FK L++
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEKVLEQ 116
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR+ A+A PV +KIFVG + + + + + +F YGEIE
Sbjct: 117 KEHRLDGRLIDPKRAMA-----MKKEPV----KKIFVGGLIPEATEENIREYFGEYGEIE 167
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D ++ K +GF YK A+ L + T++G + +LA K+
Sbjct: 168 NIELPLDPKSNKRRGFIFITYKEEASAKKCLENKFHTIEGSRCELKLAQPKEV 220
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D +++ R++A +K+F+ GL + T E +R F YGE+E +
Sbjct: 113 VLEQKEHRLDGRLIDPKRAMAMKKEPVKKIFVGGLIPEATEENIREYFGEYGEIENIELP 172
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
LD + K +G+ FIT+K A L+ I+G LA
Sbjct: 173 LDPKSNKRRGFIFITYKEEASAKKCLENKFHTIEGSRCELKLA 215
>gi|380492932|emb|CCF34246.1| nuclear polyadenylated RNA-binding protein [Colletotrichum
higginsianum]
Length = 448
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT + LR FS +GE+ E V+ D +TG+S+G+GF+TF+ + + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVK- 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V + + + +FA +G + +
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKDYFAQFGRVVD 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
L DK TG+P+GF +++ G +A L ++ + GK + KKA+P G
Sbjct: 112 ATLMMDKDTGRPRGFGFVTFESEAGVEACLSTSLE-IHGKPIEV-----KKAQPRG 161
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ +TT + + F+ +G + +A +++DK TG+ +G+
Sbjct: 67 IIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGF 126
Query: 115 GFITFKHIDGAMLAL 129
GF+TF+ G L
Sbjct: 127 GFVTFESEAGVEACL 141
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 120
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V +S + P RKIFVG +P+ ++ D L HF+ YG
Sbjct: 121 --EDEHNIDGRTVEVKRTVPREEMSSKDGP---KTRKIFVGGLPSTLTEDDLRDHFSSYG 175
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 176 NVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 231
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ GL T + LR FS+YG + E +++D +TG+S+G+GF+TF+ D
Sbjct: 148 PKTRKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVER 207
Query: 128 ALKE 131
+ E
Sbjct: 208 VISE 211
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 120
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V +S + P RKIFVG +P+ ++ D L HF+ YG
Sbjct: 121 --EDEHNIDGRTVEVKRTVPREEMSSKDGP---KTRKIFVGGLPSTLTEDDLRDHFSSYG 175
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 176 NVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 231
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ GL T + LR FS+YG + E +++D +TG+S+G+GF+TF+ D
Sbjct: 148 PKTRKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVER 207
Query: 128 ALKE 131
+ E
Sbjct: 208 VISE 211
>gi|417410136|gb|JAA51545.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 368
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 21 SPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGW 80
SP R+ P+ R + R + + SA+ R + RKLFI GL +
Sbjct: 1 SPARVRPR--RAVSSRSAAGNRAEATESAMEREKEQF-------------RKLFIGGLSF 45
Query: 81 DTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAMLALKEPSKKID 137
+TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM A ID
Sbjct: 46 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHS---ID 102
Query: 138 GRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLG 196
GRV AVA + P V+++K+FVG + D L +F YG+I+ +
Sbjct: 103 GRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEII 159
Query: 197 FDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
D+Q+GK +GF + + ++ T++G R A
Sbjct: 160 TDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 202
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 48 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 107
Query: 131 EPSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSA 177
+DGR T G ++N KIFVG +P++
Sbjct: 108 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGE 164
Query: 178 DKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCR 237
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 165 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 224
Query: 238 LADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 225 RAEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 260
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 161 VSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQA 220
++ RK+FVG + + + L ++F+ YGE+ + + DK T + +GF +K
Sbjct: 45 IAPRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 104
Query: 221 ALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
L T+DG+ ++ KP P G P G
Sbjct: 105 VLASRPHTLDGRNID--------PKPCTPRGMQPERTRPKEG 138
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 35 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 94
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 95 DAAMSARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFE 152
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 153 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 203
>gi|218198571|gb|EEC80998.1| hypothetical protein OsI_23744 [Oryza sativa Indica Group]
Length = 309
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F AYGE+ EAVVI D+ATG+SKGYGF+TF+ D A
Sbjct: 29 DTTYTKVFVGGLAWETRSEGLRAHFEAYGEILEAVVITDRATGRSKGYGFVTFRDPDSAR 88
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSG 152
+A +P IDGR NLA+ G G
Sbjct: 89 MACMDPYPVIDGRRANCNLAILGRPG 114
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YGEI E + D+ TG+ KG+ ++ + A+
Sbjct: 29 DTTYTKVFVGGLAWETRSEGLRAHFEAYGEILEAVVITDRATGRSKGYGFVTFRDPDSAR 88
Query: 220 AALVDPIKTVDGKQLNCRLA 239
A +DP +DG++ NC LA
Sbjct: 89 MACMDPYPVIDGRRANCNLA 108
>gi|213513508|ref|NP_001134615.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
gi|209734656|gb|ACI68197.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
Length = 339
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR F +G L ++VV+ D +S+G+GF+T+ ++
Sbjct: 8 EPEQLRKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFGFVTYSCVEEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
+ K+DGRV AV S +N P ++++KIFVG + D D + +F
Sbjct: 68 DACMAARPHKVDGRVVEPKRAV---SREDSNRPGAHLTVKKIFVGGIKEDTREDHIREYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA---DN 241
YG IE + ++ TGK +GF + + + T++ R A
Sbjct: 125 ETYGRIETIDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKYHTINSHNCEVRKALPKQE 184
Query: 242 KKAKPMGPDGGGPGNV 257
+A GGG GN
Sbjct: 185 MEASNQRNRGGGSGNF 200
>gi|350294627|gb|EGZ75712.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 324
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT + LR FS +GE+ E V+ D ATG+S+G+GF+TFK + + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK- 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V + + + +FA +G + +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDHEFREYFAQFGRVVD 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
L DK TG+P+GF +++ G +A L ++ + GK + KKA+P G
Sbjct: 112 ATLMMDKDTGRPRGFGFVTFESEAGVEACLSANLE-IHGKPIEV-----KKAQPRG 161
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ +TT R F+ +G + +A +++DK TG+ +G+
Sbjct: 67 IIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGF 126
Query: 115 GFITFKHIDGAMLAL 129
GF+TF+ G L
Sbjct: 127 GFVTFESEAGVEACL 141
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + T+ E L++ F +G++ + VV+ D T +S+G+GFIT+ H A K
Sbjct: 30 RKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 89
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D L +F+ +G I
Sbjct: 90 ARPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSLRDYFSNFGSI 147
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P D
Sbjct: 148 VDINIVMDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALPKQND 202
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + LR FS +G + + +++DK TGK +G+ F+ F D
Sbjct: 119 TVKKLFVGALKDDHDEQSLRDYFSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 178
Query: 129 LKEPSKKIDGRVTVTNLAV 147
+ + +++G++ A+
Sbjct: 179 VLQKQHQLNGKMVDVKKAL 197
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
+RK+F+G + S + L AHF +G+I + + D +T + +GF Y + +++
Sbjct: 29 MRKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITY-----SHSSM 83
Query: 223 VDPIKTVDGKQLNCRLADNKKAKP 246
+D + +++ R+ + K+A P
Sbjct: 84 IDEAQKARPHKIDGRVVEPKRAVP 107
>gi|358388987|gb|EHK26580.1| hypothetical protein TRIVIDRAFT_77860 [Trichoderma virens Gv29-8]
Length = 525
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+FI GL W+TT + LR FS +GE+ E V+ D ++G+S+G+GF+TFK ++ M+
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVK 172
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
KI + N + + S KIFVG V D + + +FA +G
Sbjct: 173 EHFLDGKIVSLLPCHNPCIDPKRAIPRDEQEKTS--KIFVGGVSQDTTDQEFREYFAQFG 230
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF +++ G A + P++ + GK + KKA+P G
Sbjct: 231 RVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLE-IHGKPIEV-----KKAQPRG 284
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 25 LTPQDARKIVERLTSDQLLD-VLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDT 82
LT +D + + + + LD + S + H+ ++ R+I D K+F+ G+ DT
Sbjct: 158 LTFKDPKTVNIVMVKEHFLDGKIVSLLPCHNPCIDPKRAIPRDEQEKTSKIFVGGVSQDT 217
Query: 83 TTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
T + R F+ +G + +A +++DK TG+ +G+GF+TF+ G + P
Sbjct: 218 TDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINVP 267
>gi|89257474|gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]
Length = 445
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 99/175 (56%), Gaps = 10/175 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK--HIDGAMLAL 129
KLFI G+ W+TT + LR F ++GE+ EAV++ D++TG+++G+GF+ F ++ ++ L
Sbjct: 7 KLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAERVVLL 66
Query: 130 KEPSKKIDGRVTVTNLAV-----AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
+ IDG++ AV NS ++P + +KIFVG + + ++ + +F
Sbjct: 67 RHV---IDGKLVEAKKAVPRDDHKSNSSLQGSSPGPANSKKIFVGGLASSVTEAEFKKYF 123
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
A +G I + + +D++T +P+GF Y++ + L ++GK + +LA
Sbjct: 124 AQFGTITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMVEVKLA 178
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADP---TQRKLFIRGLGWDTTTEGL 87
R ++ R D L AV R D +S S+ + P +K+F+ GL T
Sbjct: 62 RVVLLRHVIDGKLVEAKKAVPRDDH--KSNSSLQGSSPGPANSKKIFVGGLASSVTEAEF 119
Query: 88 RSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
+ F+ +G + + VV+ D+ T + +G+GFI+++ D L+ +++G++ LAV
Sbjct: 120 KKYFAQFGTITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMVEVKLAV 179
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+D+ K+F+G + + + D+L +F +GE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MDMESGKLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ ++ +DGK L + KKA P
Sbjct: 61 ERVVL-LRHVIDGK-----LVEAKKAVP 82
>gi|242046120|ref|XP_002460931.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
gi|241924308|gb|EER97452.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
Length = 471
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 19/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T + LR F +GE+ EAV++ D+ TG+++G+GF+ F
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTMD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D + + N+G+S +P RKIFVG + ++++
Sbjct: 67 KHMIDGRMVEAKKAVPRDDQSI------ASKNNGSSIGSPGPGRTRKIFVGGLASNVTEV 120
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+ +F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 121 EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR 180
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 181 AVPKEQSP 188
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVLESVR---SIADADP-TQRKLFIRGLGWDTT 83
I ER+T D+ ++D AV R D + S SI P RK+F+ GL + T
Sbjct: 59 IAERVTMDKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPGRTRKIFVGGLASNVT 118
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 119 EVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEV 178
Query: 144 NLAV 147
AV
Sbjct: 179 KRAV 182
>gi|444520816|gb|ELV13038.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 205
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+ F+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + P V+ +KIFVG + + + + + +F +G+++
Sbjct: 61 RHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 115
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MG 248
+ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVMS 170
Query: 249 PDGGGPGN 256
P G G
Sbjct: 171 PTGSARGR 178
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 140
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F YGE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + + +KIFVG + + + + + +F +G+++
Sbjct: 81 TRHELDSKTIDPKVAFPRRA----QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MG 248
+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVMS 191
Query: 249 PDGGGPGN 256
P G G
Sbjct: 192 PAGSARGR 199
>gi|222635905|gb|EEE66037.1| hypothetical protein OsJ_22014 [Oryza sativa Japonica Group]
Length = 309
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F AYGE+ EAVVI D+ATG+SKGYGF+TF+ D A
Sbjct: 29 DTTYTKVFVGGLAWETRSEGLRAHFEAYGEILEAVVITDRATGRSKGYGFVTFRDPDSAR 88
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSG 152
+A +P IDGR NLA+ G G
Sbjct: 89 MACMDPYPVIDGRRANCNLAILGRPG 114
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YGEI E + D+ TG+ KG+ ++ + A+
Sbjct: 29 DTTYTKVFVGGLAWETRSEGLRAHFEAYGEILEAVVITDRATGRSKGYGFVTFRDPDSAR 88
Query: 220 AALVDPIKTVDGKQLNCRLA 239
A +DP +DG++ NC LA
Sbjct: 89 MACMDPYPVIDGRRANCNLA 108
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR FS +G+++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF + T EG +V+ I + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFG---FVTFEGED--IVEKICDIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDG 251
P G
Sbjct: 191 SPTG 194
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 37/50 (74%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFE 158
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR FS +G+++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF + T EG +V+ I + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFG---FVTFEGED--IVEKICDIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDG 251
P G
Sbjct: 191 SPTG 194
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 37/50 (74%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFE 158
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 18/192 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT EGLR FS YG + E ++ D ATG+S+G+GF+TF++ +K
Sbjct: 187 KMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTFENASSVDEVVK- 245
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG+V A+ + T KIFVG + D+ + F+ +G I
Sbjct: 246 TQHILDGKVIDPKRAIPREEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQWGSII 297
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK-------- 243
+ L DK TG+ +GF Y T + + GKQ+ + A+ ++
Sbjct: 298 DAQLMLDKDTGRSRGFGFITYDTPDAVDRVCQNKFIEFKGKQIEIKRAEPRQLQKQKQPQ 357
Query: 244 -AKPMGPDGGGP 254
+PMG + P
Sbjct: 358 MTQPMGQNMSNP 369
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 54 DDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKG 113
D + S S +DA K+FI GL W T+ + LR F +GE+ E +V+ D T +S+G
Sbjct: 4 DGIQASSGSPSDAQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRG 63
Query: 114 YGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVP 172
+GF+TF L +P ++D + +A + P V+ +KIFVG +
Sbjct: 64 FGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLS 118
Query: 173 NDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
+ + + +F +G++E+ L FDK T + +GF ++ + +V+ + +
Sbjct: 119 ANTVVEDVKQYFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIED-----VVEKVCEIHFH 173
Query: 233 QLNCRLADNKKAKP 246
++N ++ + KKA+P
Sbjct: 174 EINNKMVECKKAQP 187
>gi|291045424|ref|NP_001166975.1| DAZ associated protein 1 [Danio rerio]
Length = 418
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 26/288 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR+ FS YGE+ + V++ DK+T +S+G+GF+ FK + L
Sbjct: 24 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 83
Query: 132 PSKKIDGRVT---------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
+DGR + G + +KIFVG +P++ +L
Sbjct: 84 KPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRD 143
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+ +
Sbjct: 144 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 203
Query: 243 KAK-----PMGPDGGGPGNVSMNHGDGMGMVP-PSAGGSYGGPGGHGYPFSGPPPLGH-- 294
+K +G + GP + ++ +G P P+ SY G G S PLG+
Sbjct: 204 DSKAPAPGQLGANQWGPRAI-ISAANGWAAQPAPTWQQSY---GPQGVWVSTGQPLGYGP 259
Query: 295 HLNSSLGGPGQVPSSMGGV-----GAGGYGAGLGGPYGGYGGPGSTGY 337
L + G P Q PS GG+GA G P G+ GY
Sbjct: 260 PLPAGRGAPAQAPSPFNAFLVAAPPTGGFGAPQGYPQQGFSTQPQFGY 307
>gi|432876616|ref|XP_004073061.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL DT +GLR F +G L + VV+++K +S+ +GF+T+ + A A+
Sbjct: 7 KLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADAAMAA 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG AVA N V +KIFVG + +D+ D L +F+ YGE+E
Sbjct: 67 RPHTVDGNAVEVKRAVAREDANRPEALAKV--KKIFVGGLKDDIEEDHLTDYFSQYGEVE 124
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+ + +K+TGK +GF + + A A+V TV+G ++ + A K+
Sbjct: 125 KSEVISEKETGKKRGFGFVYFTDHDSADKAVVVKFHTVNGHKVEVKKALTKQ 176
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 57 LESVRSIADADPTQ-------RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATG 109
+E R++A D + +K+F+ GL D + L FS YGE+E++ VI +K TG
Sbjct: 76 VEVKRAVAREDANRPEALAKVKKIFVGGLKDDIEEDHLTDYFSQYGEVEKSEVISEKETG 135
Query: 110 KSKGYGFITFKHIDGAMLAL 129
K +G+GF+ F D A A+
Sbjct: 136 KKRGFGFVYFTDHDSADKAV 155
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
L K+FVG + D D L HF +G + + + +KQ + + F Y T E A AA
Sbjct: 4 QLCKLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADAA 63
Query: 222 LVDPIKTVDGKQLNCRLA 239
+ TVDG + + A
Sbjct: 64 MAARPHTVDGNAVEVKRA 81
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT + L++ F +G++ + VV+ D T +S+G+GFIT+ H A K
Sbjct: 26 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQK 85
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D L +F +G I
Sbjct: 86 ARPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSLRDYFQHFGSI 143
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P
Sbjct: 144 VDINIVMDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALP 194
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 56 VLESVRSIADAD-------PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++ D T +KLF+ L D + LR F +G + + +++DK T
Sbjct: 95 VVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKET 154
Query: 109 GKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAV 147
GK +G+ F+ F D + + +++G++ A+
Sbjct: 155 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKAL 193
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 151 SGNSTNNPVDVS----LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKG 206
+GNS + D++ +RK+F+G + + D L AHF +G+I + + D +T + +G
Sbjct: 9 NGNSNGHDDDITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRG 68
Query: 207 FALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
F Y + + ++D + +++ R+ + K+A P
Sbjct: 69 FGFITY-----SHSTMIDEAQKARPHKIDGRVVEPKRAVP 103
>gi|449492608|ref|XP_002192177.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Taeniopygia guttata]
Length = 309
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LRS + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 17 RKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 76
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 77 ARPHT---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 130
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 131 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 183
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 86 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 145
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 146 GKKRGFGFVTFDDHD 160
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F YGE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 TRHELDSKTIDPKVAFPRRA-----QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPAGSARGR 199
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
PT KLF+ GL WDTT E LR FS YG + EAVV+ D+ TG+ +G+GF+TF A
Sbjct: 6 PTSAKLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTE-PAAAD 64
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACY 187
A+ E IDGR ++ S + RK+FVG + D + D+ +F+ +
Sbjct: 65 AVVEDVHVIDGRQI--------DAKKSVPQEMKPKARKVFVGGLSPDTTEDQFREYFSQF 116
Query: 188 GEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD---GKQLNCRLADNK 242
GE+ E + D +G+ +GF + AE A A V T+ GK++ + A K
Sbjct: 117 GEVVEAQIMQDHMSGRSRGFGFVTF--AEDASAESVFAAGTMHDLGGKKVEVKPATPK 172
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 57 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 114
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V + + P RKIF+G +P ++ D+L HF+ YG
Sbjct: 115 --EDDHVIDGRTVEVKRTVPREEMTTKDGP---KTRKIFIGGLPPSLTEDELKDHFSSYG 169
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
++ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 170 KVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 225
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
+T D I + L D ++D + V R V + D P RK+FI GL T
Sbjct: 102 VTFSDPSVIDKVLEDDHVIDGRTVEVKR--TVPREEMTTKDG-PKTRKIFIGGLPPSLTE 158
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
+ L+ FS+YG++ E ++LD +TG+S+G+GF+TF+ D + E
Sbjct: 159 DELKDHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 205
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G+ ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 188 AEPRDSKSQAP--GQPGASQW----GSRVVPSAANGWAGQP 222
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F YG++ EA+V+ D T +S+G+GF+TF + L +
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DG+ +A + +P V+ +KIFVG + + + + ++F +G I
Sbjct: 104 GTHELDGKKVDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 158
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P
Sbjct: 159 EDAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP 209
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++S F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 184
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F YG++ EA+V+ D T +S+G+GF+TF + L +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DG+ +A + +P V+ +KIFVG + + + + ++F +G I
Sbjct: 90 GTHELDGKKVDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 144
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P
Sbjct: 145 EDAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP 195
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++S F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 170
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 77 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 136
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 137 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 187
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L TV G + ++A K+
Sbjct: 188 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 240
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 133 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 192
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 193 MDPKLNKRRGFVFITFKE--------EEPVKKV 217
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F YGE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + + +KIFVG + + + + + +F +G+++
Sbjct: 81 TRHELDSKTIDPKVAFPRRA----QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MG 248
+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVMS 191
Query: 249 PDGGGPGN 256
P G G
Sbjct: 192 PAGSARGR 199
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 94 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 153
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 154 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 208
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 209 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 262
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 30/167 (17%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+ F+T+ ++
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVTYSCVE-- 87
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
G+ P LRK+F+G + + + D L HF
Sbjct: 88 -------------------------EGHDPKEP--EQLRKLFIGGLSFETTDDSLREHFE 120
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
+G + + + D QT + +GF Y E AA+ VDG+
Sbjct: 121 KWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGR 167
>gi|21553963|gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 431
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 13/178 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK--HIDGAMLAL 129
KLFI G+ W+T+ + LR F ++GE+ EAV++ D+ATG+++G+GF+ F ++ ++ L
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 130 KEPSKKIDGRVTVTNLA------VAGNSGNST--NNPVDVSLRKIFVGNVPNDMSADKLL 181
K IDG++ A V N NS+ +P + +KIFVG + + ++ +
Sbjct: 67 KHI---IDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFK 123
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+FA +G I + + +D +T +P+GF Y + E L ++GK + +LA
Sbjct: 124 KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLA 181
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F+ +G + + VV+ D T + +G+GFI++ + L+
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 131 EPSKKIDGRVTVTNLAVAGNSG-NSTNNPVDVS 162
+ +++G++ LAV + N+ N ++V+
Sbjct: 166 KTFHELNGKMVEVKLAVPKDMALNTMRNQMNVN 198
>gi|432878673|ref|XP_004073373.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 330
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D+ TG+S+G+GFI FK L++
Sbjct: 73 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVDKVLEQ 132
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR A+A ++KIFVG + D+S +++ +F +GEIE
Sbjct: 133 KEHRLDGRQIDPKRAMAMKK---------EIVKKIFVGGLKPDLSKEEIEEYFGAFGEIE 183
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF YK + L TV G + ++A K+
Sbjct: 184 TIELPQDPKTEKRRGFVFITYKEEPSVKKVLEKKYHTVGGSKCEIKIAQPKEV 236
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D ++ R++A +K+F+ GL D + E + F A+GE+E +
Sbjct: 129 VLEQKEHRLDGRQIDPKRAMAMKKEIVKKIFVGGLKPDLSKEEIEEYFGAFGEIETIELP 188
Query: 104 LDKATGKSKGYGFITFKH 121
D T K +G+ FIT+K
Sbjct: 189 QDPKTEKRRGFVFITYKE 206
>gi|348564390|ref|XP_003467988.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cavia porcellus]
Length = 383
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 46 LSSAVAR--HDDVLESV---RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEA 100
S+A R H LE+V R + + RKLFI GL ++TT E LR+ + +G+L +
Sbjct: 22 FSAAAERSGHRKTLETVPLERKKREKEQF-RKLFIGGLSFETTEESLRNYYEQWGKLTDC 80
Query: 101 VVILDKATGKSKGYGFITFK---HIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNN 157
VV+ D A+ +S+G+GF+TF +D AM A IDGRV AVA +
Sbjct: 81 VVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHS---IDGRVVEPKRAVA---REESGK 134
Query: 158 P-VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAE 216
P V+++K+FVG + D L +F YG+I+ + D+Q+GK +GF + +
Sbjct: 135 PGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 194
Query: 217 GAQAALVDPIKTVDGKQLNCRLA 239
++ T++G R A
Sbjct: 195 PVDKIVLQKYHTINGHNAEVRKA 217
>gi|302509632|ref|XP_003016776.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
gi|291180346|gb|EFE36131.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
Length = 489
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 21/179 (11%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLAL 129
+FI GL W+TT + L+ FS +GE+ E V+ D A+G+S+G+GF+TF K ++ M+
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK- 59
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ + T+ KIFVG V + + + F +G
Sbjct: 60 ---EHYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQEATEQEFKQFFMQFGR 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 109 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLE-IHGKAIEV-----KKAQPRG 161
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ + T + + F +G + +A +++DK TG+ +G+
Sbjct: 67 IIDPKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGF 126
Query: 115 GFITF 119
GF+TF
Sbjct: 127 GFVTF 131
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like, partial
[Monodelphis domestica]
Length = 356
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 6 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 65
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 66 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 120
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 121 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 174
>gi|219519440|gb|AAI45589.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +DGAM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDGAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFITFEGED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|18422817|ref|NP_568685.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30695248|ref|NP_851149.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17528972|gb|AAL38696.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23297042|gb|AAN13229.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332008155|gb|AED95538.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008156|gb|AED95539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 431
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 13/178 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK--HIDGAMLAL 129
KLFI G+ W+T+ + LR F ++GE+ EAV++ D+ATG+++G+GF+ F ++ ++ L
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 130 KEPSKKIDGRVTVTNLA------VAGNSGNST--NNPVDVSLRKIFVGNVPNDMSADKLL 181
K IDG++ A V N NS+ +P + +KIFVG + + ++ +
Sbjct: 67 KHI---IDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFK 123
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+FA +G I + + +D +T +P+GF Y + E L ++GK + +LA
Sbjct: 124 KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLA 181
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F+ +G + + VV+ D T + +G+GFI++ + L+
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 131 EPSKKIDGRVTVTNLAVAGNSG-NSTNNPVDVS 162
+ +++G++ LAV + N+ N ++V+
Sbjct: 166 KTFHELNGKMVEVKLAVPKDMALNTMRNQMNVN 198
>gi|324501271|gb|ADY40568.1| RNA-binding protein squid [Ascaris suum]
Length = 303
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ G+ +D T E L + FS +GE+ +A V D+ TG+S+G+ F+ F + AL
Sbjct: 38 KKIFVGGIAYDVTNEDLCNYFSQFGEVAQAQVKFDRNTGRSRGFAFVEFATGEACKAALG 97
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ T+ N + S N +K+FVG +P D + L AHFA YG++
Sbjct: 98 TREQ------TLKNKQIEVKPAKSREN------KKVFVGGLPADFPEEDLRAHFAQYGKV 145
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
E+ FDKQT + FA V++ E A A P +T R D KKA P G
Sbjct: 146 EDIEWPFDKQTKARRNFAFIVFEEEESADRASSTPKQT-----FGSRECDVKKAVPQG 198
>gi|344284992|ref|XP_003414248.1| PREDICTED: hypothetical protein LOC100654996 [Loxodonta africana]
Length = 595
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 330 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 389
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 390 SVDKVMDQKEHKLNGKVIDPKRAKAMK----TKEPV----KKIFVGGLSPDTPEEKIREY 441
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 442 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 501
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F+ YG++ E +V+ D T +S+G+GFITF L +
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+ ++DG+ +A T+ + +KIFVG + + + + +F +G IE
Sbjct: 83 GTHELDGKKIDPKVAFP----RRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIE 138
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDG 251
+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P +
Sbjct: 139 DAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQPK--EV 191
Query: 252 GGPGNVSMNHGDGMG 266
P N++ G G
Sbjct: 192 MLPANLAKTRAAGRG 206
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E +++ F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 163
>gi|432876614|ref|XP_004073060.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 302
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL +TT EGLR F YG L + VV++++ G+S+ +GFIT+ + A A+
Sbjct: 7 KLFVGGLNVETTDEGLRKYFEQYGALTDCVVVMNQQLGRSRCFGFITYSAPEEADAAMAA 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++G A+A N N + +++KIFVG V + + A+ L +F+ +G +E
Sbjct: 67 KPHVVEGNNVELKRAIAREDAN--NPDIVANVKKIFVGGVKDHVEAENLTEYFSQFGRVE 124
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+ + DKQTG+ +GF ++ + A A + T+ G ++ + A K+
Sbjct: 125 KSEIISDKQTGRKRGFGFVYFEDTDSATKAALAKYHTISGNKVEVKKALTKQ 176
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 46 LSSAVARHD----DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAV 101
L A+AR D D++ +V+ K+F+ G+ E L FS +G +E++
Sbjct: 78 LKRAIAREDANNPDIVANVK----------KIFVGGVKDHVEAENLTEYFSQFGRVEKSE 127
Query: 102 VILDKATGKSKGYGFITFKHIDGAMLA 128
+I DK TG+ +G+GF+ F+ D A A
Sbjct: 128 IISDKQTGRKRGFGFVYFEDTDSATKA 154
>gi|89130657|gb|AAI14332.1| Dazap1 protein [Danio rerio]
Length = 384
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 26/288 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR+ FS YGE+ + V++ DK+T +S+G+GF+ FK + L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 132 PSKKIDGRVT---------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
+DGR + G + +KIFVG +P++ +L
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRD 131
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+ +
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 243 KAK-----PMGPDGGGPGNVSMNHGDGMGMVP-PSAGGSYGGPGGHGYPFSGPPPLGH-- 294
+K +G + GP + ++ +G P P+ SY G G S PLG+
Sbjct: 192 DSKAPAPGQLGANQWGPRAI-ISAANGWAAQPAPTWQQSY---GPQGVWVSTGQPLGYGP 247
Query: 295 HLNSSLGGPGQVPSSMGGV-----GAGGYGAGLGGPYGGYGGPGSTGY 337
L + G P Q PS GG+GA G P G+ GY
Sbjct: 248 PLPAGRGAPAQAPSPFNAFLVAAPPTGGFGAPQGYPQQGFSTQPQFGY 295
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F YGE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + + +KIFVG + + + + + +F +G+++
Sbjct: 81 TRHELDSKTIDPKVAFPRRA----QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MG 248
+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVMS 191
Query: 249 PDGGGPGN 256
P G G
Sbjct: 192 PAGSARGR 199
>gi|71896513|ref|NP_001025523.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus (Silurana)
tropicalis]
gi|52355236|gb|AAU44811.1| AUF1 [Xenopus (Silurana) tropicalis]
Length = 295
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 19/174 (10%)
Query: 65 DADPTQR---KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
DA T+ K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK
Sbjct: 29 DASKTEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 88
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLL 181
+G +++ K++G+V A A T PV +KIFVG + D +K+
Sbjct: 89 SEGVDKVMEQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIR 140
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+F +GEIE L D +T K +GF +K DP+K + K+ +
Sbjct: 141 EYFGTFGEIEAIELPMDNKTNKRRGFCFITFKEE--------DPVKKIMEKKYH 186
>gi|297790889|ref|XP_002863329.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309164|gb|EFH39588.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 99/182 (54%), Gaps = 21/182 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ W+T+ + LR F ++GE+ EAV++ D+ATG+++G+GF+ F
Sbjct: 7 KLFIGGISWETSEDRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAERVVLL 66
Query: 120 KH-IDGAMLALKEPSKKIDGRV-TVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSA 177
KH IDG ++ K+ + D V +N ++ G+ G ST +KIFVG + + ++
Sbjct: 67 KHIIDGKIVEAKKAVPRDDHAVFNKSNSSLQGSPGPSTT-------KKIFVGGLASSVTE 119
Query: 178 DKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCR 237
+ +FA +G I + + +D +T +P+GF Y + + L ++GK + +
Sbjct: 120 AEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDKVLQKTFHELNGKMVEVK 179
Query: 238 LA 239
LA
Sbjct: 180 LA 181
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +K+F+ GL T + F+ +G + + VV+ D T + +G+GFI++ D
Sbjct: 104 TTKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDKV 163
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSG-NSTNNPVDVS 162
L++ +++G++ LAV N+ N ++V+
Sbjct: 164 LQKTFHELNGKMVEVKLAVPKEMALNTMRNQMNVN 198
>gi|345790931|ref|XP_854252.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Canis lupus
familiaris]
Length = 362
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F + ++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSARGR 199
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F + ++++A+++ DK T + +G+GF+TF+ D
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESED 161
>gi|383416553|gb|AFH31490.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 272
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|326518012|dbj|BAK07258.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 275
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F AYG++ EAVVI D+ATG+SKGYGF+TF+ D A
Sbjct: 30 DTTYTKVFVGGLAWETRSEGLRAHFDAYGDILEAVVITDRATGRSKGYGFVTFRDPDSAR 89
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSG 152
+A +P IDGR NLA+ G G
Sbjct: 90 MACMDPYPVIDGRRANCNLAILGRPG 115
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YG+I E + D+ TG+ KG+ ++ + A+
Sbjct: 30 DTTYTKVFVGGLAWETRSEGLRAHFDAYGDILEAVVITDRATGRSKGYGFVTFRDPDSAR 89
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMGPDG 251
A +DP +DG++ NC LA + P P G
Sbjct: 90 MACMDPYPVIDGRRANCNLAILGRPGPAVPFG 121
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALKE 131
+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK + +KE
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + + F +G +
Sbjct: 61 --HYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQEATEQDFKQFFMQFGRVV 110
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK +G+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 111 DATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL-GKPIEV-----KKAQPRG 161
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 45 LTFKDPKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQERTSKIFVGGVSQEAT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK +G+ +G+GF+TF L P + + + V
Sbjct: 96 EQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|171846711|gb|AAI61598.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 280
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D TG+S+G+GFI FK L++
Sbjct: 20 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 79
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR+ A+A +P+ +KIFVG + + DK+ +F +GEIE
Sbjct: 80 KEHRLDGRLIDPKKAMA-----MKKDPI----KKIFVGGLNPEAGEDKIREYFETFGEIE 130
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K E + L V G + ++A K+
Sbjct: 131 AIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKFEIKIAQPKEV 183
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 20/104 (19%)
Query: 45 VLSSAVARHDDVLESVRSIAD---ADPTQ---------RKLFIRGLGWDTTTEGLRSIFS 92
+L A D VLE D DP + +K+F+ GL + + +R F
Sbjct: 65 ILFKDAASVDKVLEQKEHRLDGRLIDPKKAMAMKKDPIKKIFVGGLNPEAGEDKIREYFE 124
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+GE+E + +D T K +G+ FITFK +EP KKI
Sbjct: 125 TFGEIEAIELPMDPKTNKRRGFVFITFKE--------EEPVKKI 160
>gi|68069479|ref|XP_676651.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56496444|emb|CAH98134.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 348
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 15/221 (6%)
Query: 12 NGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQR 71
N + D ES + R+++ L+ +QL+D+L++A + H+D+ + + P+ R
Sbjct: 46 NDKKIKDEESE----VEQLRRLIAPLSKEQLIDILATAASIHEDIRDRCNDAVTSSPSTR 101
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
+L +R + + T E F +GE+E+ +++ +K G+SKGYGF+TFK+I+ LK
Sbjct: 102 RLMVRNIPFSTKDEQFLKYFETFGEIEDGIIVREKE-GRSKGYGFVTFKYIESVQKCLK- 159
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
S +D + L + + N K+FV N+ + L F YG++E
Sbjct: 160 GSHTLDNKDLQVRLVADPFTDHYQN--------KLFVRNLSQKTNVTTLRNIFEKYGKLE 211
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
E + D + GK KG+ + + + A + P + +D +
Sbjct: 212 ECVIIHDNE-GKSKGYGFLTFSSPKEAFKVMQQPERIIDNR 251
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 59 SVRSIAD--ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
VR +AD D Q KLF+R L T LR+IF YG+LEE V+I D GKSKGYGF
Sbjct: 170 QVRLVADPFTDHYQNKLFVRNLSQKTNVTTLRNIFEKYGKLEECVIIHDNE-GKSKGYGF 228
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNN 157
+TF A +++P + ID RV + AV+ N NN
Sbjct: 229 LTFSSPKEAFKVMQQPERIIDNRVVFLHFAVSQNYKKYQNN 269
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV A++ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAISRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|444725879|gb|ELW66430.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 191
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFIRGL ++TT E LRS F +G L + +V+ D T S+G+GF+T+ ++ +K
Sbjct: 23 KLFIRGLSFETTDESLRSHFEQWGTLTDCMVMRDPNTKHSRGFGFVTYATVEEVDATMKA 82
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
++DGRV + S + P ++++KIFVG + D L +F YG+I
Sbjct: 83 RPHEVDGRVVEPKRVI---SREDSQRPGAHLTMKKIFVGGIKEDTEEHHLRDYFEQYGKI 139
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
E + D+ +GK +GFA +Y + ++ TV+G R A +K
Sbjct: 140 EVIKIMTDRGSGKKRGFAFVIYDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 191
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R I+ D T +K+F+ G+ DT LR F YG++E ++ D+ +
Sbjct: 91 VVEPKRVISREDSQRPGAHLTMKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIKIMTDRGS 150
Query: 109 GKSKGYGFITF 119
GK +G+ F+ +
Sbjct: 151 GKKRGFAFVIY 161
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ G+ W+T E L F YG + +AVV+ D T +S+G+GF+TF L
Sbjct: 1 KLFVGGISWNTNEESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSS 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+ R A+ S+++P +++K+F+G + + M+ D + +F +GEIE
Sbjct: 61 GPHVVCDREIDPKRAIP----RSSSDPASTTIKKLFLGGLASSMNEDSIKNYFVQFGEIE 116
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL 234
+ D+ TG+P+GF +KT E A++ L T+DG ++
Sbjct: 117 DALCQRDRDTGRPRGFGFITFKTEEAAESVLRQQYHTIDGNRV 159
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 42 LLDVLSS----AVARHDDVLESV-RSIAD-ADPTQRKLFIRGLGWDTTTEGLRSIFSAYG 95
+ DVLSS R D ++ RS +D A T +KLF+ GL + +++ F +G
Sbjct: 54 VTDVLSSGPHVVCDREIDPKRAIPRSSSDPASTTIKKLFLGGLASSMNEDSIKNYFVQFG 113
Query: 96 ELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDG 138
E+E+A+ D+ TG+ +G+GFITFK + A L++ IDG
Sbjct: 114 EIEDALCQRDRDTGRPRGFGFITFKTEEAAESVLRQQYHTIDG 156
>gi|113931574|ref|NP_001039236.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
gi|89272441|emb|CAJ82657.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
Length = 313
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D TG+S+G+GFI FK L++
Sbjct: 53 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 112
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR+ A+A +P+ +KIFVG + + DK+ +F +GEIE
Sbjct: 113 KEHRLDGRLIDPKKAMA-----MKKDPI----KKIFVGGLNPEAGEDKIREYFETFGEIE 163
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K E + L V G + ++A K+
Sbjct: 164 AIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIKIAQPKEV 216
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 20/104 (19%)
Query: 45 VLSSAVARHDDVLESVRSIAD---ADPTQ---------RKLFIRGLGWDTTTEGLRSIFS 92
+L A D VLE D DP + +K+F+ GL + + +R F
Sbjct: 98 ILFKDAASVDKVLEQKEHRLDGRLIDPKKAMAMKKDPIKKIFVGGLNPEAGEDKIREYFE 157
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+GE+E + +D T K +G+ FITFK +EP KKI
Sbjct: 158 TFGEIEAIELPMDPKTNKRRGFVFITFKE--------EEPVKKI 193
>gi|395835057|ref|XP_003790500.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Otolemur
garnettii]
Length = 373
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G V+ D T +S+G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK +
Sbjct: 2 PCSLKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 61
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSA 177
L +DGR P + KIFVG +P++
Sbjct: 62 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 121
Query: 178 DKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCR 237
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 122 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 181
Query: 238 LADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 182 RAEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 217
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 18/202 (8%)
Query: 52 RHDDVLESV----RSIAD--ADPTQ---RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVV 102
RH D++ V + + D A Q RK+F+ GL WDT+ + L+ F+ +GE+ + +
Sbjct: 26 RHLDLVRKVGRSSKQVEDCTAKVIQKPPRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTI 85
Query: 103 ILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS 162
+D TG+S+G+GFI FK L + ++DGRV A+A +PV
Sbjct: 86 KMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMA-----MKKDPV--- 137
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
+KIFVG + + + +K+ +F +GEIE L D ++ K +GF +K E + L
Sbjct: 138 -KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVL 196
Query: 223 VDPIKTVDGKQLNCRLADNKKA 244
T+ G + ++A K+
Sbjct: 197 EKKFHTISGSKCEIKVAQPKEV 218
>gi|147905111|ref|NP_001081320.1| heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Xenopus
laevis]
gi|1710626|sp|P51992.1|RO32_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 2;
AltName: Full=hnRNP A3(B)
gi|214747|gb|AAA49950.1| ribonucleoprotein [Xenopus laevis]
Length = 385
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G+L + VV+ D T +S+G+GF+T+ ++
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
++ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSRE--DSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFE 139
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+Q+GK +GFA + + +V T++ + A +K+
Sbjct: 140 GYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCEVKKALSKQ 197
>gi|327303046|ref|XP_003236215.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
gi|326461557|gb|EGD87010.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
Length = 489
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 21/179 (11%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLAL 129
+FI GL W+TT + L+ FS +GE+ E V+ D A+G+S+G+GF+TF K ++ M+
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK- 59
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ + T+ KIFVG V + + + F +G
Sbjct: 60 ---EHYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQEATEQEFKQFFMQFGR 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 109 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLE-IHGKAIEV-----KKAQPRG 161
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ + T + + F +G + +A +++DK TG+ +G+
Sbjct: 67 IIDPKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGF 126
Query: 115 GFITF 119
GF+TF
Sbjct: 127 GFVTF 131
>gi|255641990|gb|ACU21262.1| unknown [Glycine max]
Length = 220
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 85/145 (58%), Gaps = 13/145 (8%)
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLL 181
++ AL+ PSK IDGR+ V NLA SG S+ D+SLRK+++G++ +++++ LL
Sbjct: 1 MESTQQALRAPSKLIDGRLAVCNLACESLSGTSSAP--DLSLRKLYIGSLSPEVTSEILL 58
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+FA +GEIEEG + +D+ T + +GF YKTAE A+ A+ D K + G+ + + AD+
Sbjct: 59 NYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDDVEKMLGGRNIVVKYADS 118
Query: 242 KKAK-----------PMGPDGGGPG 255
K K PM P PG
Sbjct: 119 HKGKTGQPPFPSGVVPMAPLPRNPG 143
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D + RKL+I L + T+E L + F+ +GE+EE V D+ T +S+G+GF+T+K + A
Sbjct: 37 DLSLRKLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAK 96
Query: 127 LALKEPSKKIDGRVTVTNLA 146
A+ + K + GR V A
Sbjct: 97 KAIDDVEKMLGGRNIVVKYA 116
>gi|148673673|gb|EDL05620.1| mCG50656 [Mus musculus]
Length = 271
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 198
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|349804307|gb|AEQ17626.1| putative heterogeneous nuclear ribonucleoprotein A3 [Hymenochirus
curtipes]
Length = 249
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 5/173 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G+L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 69 DAAMTARPHKVDGRVVEPKRAVSRE--DSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFE 126
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 127 GYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 177
>gi|440912092|gb|ELR61691.1| hypothetical protein M91_00743 [Bos grunniens mutus]
Length = 266
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 5/173 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI GL ++TT E LRS F +G L + VV +D T +S+G+GF+T+ ++ A+
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVV-MDPNTKRSRGFGFVTYATVEEVDAAMNA 73
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+K+DGRV AV S + P ++++KIFVG + D L +F YG+I
Sbjct: 74 RPQKMDGRVVAPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKI 130
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 131 EVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 183
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
A T +K+F+ G+ DT LR F YG++E ++ D+ +GK +G+ F+TF D
Sbjct: 99 AHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 158
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA-MLALKE 131
+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK + +KE
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVKE 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V D + F +G +
Sbjct: 61 --HYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQDATEQDFKKFFMQFGRVV 110
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 111 DATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEV-----KKAQPRG 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DA+ + + + LD +++ R+I D K+F+ G+ D T
Sbjct: 45 LTFKDAKTVNTVMVKEHYLD---------GKIIDPKRAIPRDEQERTSKIFVGGVSQDAT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+ + F +G + +A +++DK TG+ +G+GF+TF L +P
Sbjct: 96 EQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQP 144
>gi|154296333|ref|XP_001548598.1| hypothetical protein BC1G_12993 [Botryotinia fuckeliana B05.10]
Length = 627
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 33/203 (16%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT E L+ FS +GE+ E V+ D A+G+S+G+GF+TFK + + +
Sbjct: 120 KMFIGGLNWETTDESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVK 179
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNN------------------------PVDVSLR--K 165
+DG++ +L NS S + P D R K
Sbjct: 180 -EHYLDGKIVRPDLKTFNNSLRSYPSKFLLLASEGTHSHTTFKIDPKRAIPRDEQERTSK 238
Query: 166 IFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDP 225
IFVG V D S +F +G + + L DK TG+P+GF + + +A L P
Sbjct: 239 IFVGGVSQDASEQDFKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEAP 298
Query: 226 IKTVDGKQLNCRLADNKKAKPMG 248
++ + GK + KKA+P G
Sbjct: 299 LE-IHGKPIEV-----KKAQPRG 315
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D K+F+ G+ D + + + F+ +G + +A +++DK TG+ +G+GF+TF +
Sbjct: 231 DEQERTSKIFVGGVSQDASEQDFKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTFDS-EA 289
Query: 125 AMLALKEPSKKIDGR-VTVTNLAVAGN 150
A+ A E +I G+ + V GN
Sbjct: 290 AVEACLEAPLEIHGKPIEVKKAQPRGN 316
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L++
Sbjct: 113 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEAASVDKVLEQ 172
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K+DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 173 KEHKLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEAAEEKIREYFGEFGEIE 223
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K + + L V G + ++A K+
Sbjct: 224 AIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVSGSKCEIKVAQPKEV 276
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 45 VLSSAVARHDDVLESVRSIAD---ADPTQ---------RKLFIRGLGWDTTTEGLRSIFS 92
+L A D VLE D DP + +K+F+ GL + E +R F
Sbjct: 158 ILFKEAASVDKVLEQKEHKLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEAAEEKIREYFG 217
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+GE+E + +D T K +G+ FITFK D L++ + G +A
Sbjct: 218 EFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVSGSKCEIKVA 271
>gi|403287876|ref|XP_003935149.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 356
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LRS F +G L VV+ T S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTHKSLRSHFEQWGTLTGCVVMRHPNTKHSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K++GRV AV S + P ++++KIFVG++ D L +F
Sbjct: 69 DAAMNARPHKVNGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK KGFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRSSGKKKGFAFVTFDDHDSVDKIIIKKYHTVNGHNCEVRKALSKQ 184
>gi|296473573|tpg|DAA15688.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + V++ D T S+G+G +T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVLMRDPNTKHSRGFGLVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV SG + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAV---SGEDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F Y +IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HXRDYFEQYRKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELR 130
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
Query: 242 KKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 191 RDSKSQAP--GQPGASQW----GSRVVPSAANGWAGQP 222
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 100 bits (248), Expect = 2e-18, Method: Composition-based stats.
Identities = 63/180 (35%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 2617 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 2676
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 2677 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSIRDYFQNFGNI 2734
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P D
Sbjct: 2735 VDINIVIDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALPKQND 2789
Score = 46.2 bits (108), Expect = 0.030, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
+A T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 2702 NAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDP 2761
Query: 125 AMLALKEPSKKIDGRV 140
+ + +++G++
Sbjct: 2762 VDKVVLQKQHQLNGKM 2777
>gi|58332792|ref|NP_001011470.1| musashi RNA-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|147899394|ref|NP_001081302.1| nrp-1B [Xenopus laevis]
gi|214632|gb|AAA49920.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
gi|52221204|gb|AAH82667.1| LOC397764 protein [Xenopus laevis]
gi|56970642|gb|AAH88603.1| musashi homolog 1 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR FS +G+++E +V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF + T EG +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFG---FVTFEGED--IVEKVCDIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDG 251
P G
Sbjct: 191 SPTG 194
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 37/50 (74%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFE 158
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 25/229 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP---GGHGY 284
A+ + +K P G PG G +VP +A G G P HGY
Sbjct: 188 AEPRDSKSQPP--GQPGASQW----GSRVVPSAANGWAGQPPPTWQHGY 230
>gi|401401445|ref|XP_003881013.1| hypothetical protein NCLIV_040540 [Neospora caninum Liverpool]
gi|325115425|emb|CBZ50980.1| hypothetical protein NCLIV_040540 [Neospora caninum Liverpool]
Length = 434
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+D + RKLF+ GL TTT+ LR+ F YG++ ++ V+ DK TG+S+G+GFITF +
Sbjct: 114 SDKEVQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPE 173
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLA 182
+ + + +DG A+ D ++FVG + +D++ + L A
Sbjct: 174 -PVSRVADMRHTVDGTQVEVRRAIPREEAREHGGSGADRDAGRLFVGGISDDVNDESLRA 232
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
+F YGEI+ + D+Q +P+GF +++ + A+ A+
Sbjct: 233 YFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAI 272
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
+V +RK+FVG + + D L +F YG++ + + FDK TG+ +GF + T E
Sbjct: 117 EVQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPEPV- 175
Query: 220 AALVDPIKTVDGKQLNCRLA 239
+ + D TVDG Q+ R A
Sbjct: 176 SRVADMRHTVDGTQVEVRRA 195
>gi|291415465|ref|XP_002723972.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L HF
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|405977312|gb|EKC41770.1| Heterogeneous nuclear ribonucleoprotein 27C [Crassostrea gigas]
Length = 569
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 20/187 (10%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
++KLFI GL WDT + L + FS YGE+ + VV+ ++ TGKS+G+GF+TF L
Sbjct: 40 KKKLFIGGLSWDTDQDSLLNFFSQYGEVIDCVVMKNQQTGKSRGFGFVTFNDAQCVDTVL 99
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL----------------RKIFVGNVPN 173
IDGR A N + P D +KIF+G +PN
Sbjct: 100 SAAPHTIDGRQVD---AKPCNPKAANKGPKDGGGRIHGGGGGGGGGGDKDKKIFMGGLPN 156
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
+ D L F YG++ + + D+Q K +GF +++ + + ++GKQ
Sbjct: 157 -VDEDFLRNFFGKYGKVLDVNIMIDQQNKKSRGFGFLTFESEDAVDQVCAEHFININGKQ 215
Query: 234 LNCRLAD 240
+ C+ A+
Sbjct: 216 VECKRAE 222
>gi|356527120|ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
Length = 513
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ F YGE+ E V++ D+ TG+++G+GF+ F A + +
Sbjct: 41 KLFIGGISWDTDEERLKEYFGKYGEVIETVIMRDRVTGRARGFGFVVFGDPSVAERVIMD 100
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNN---PVDVS-----LRKIFVGNVPNDMSADKLLAH 183
IDGR AV + + N VS +KIFVG +P+ ++ +
Sbjct: 101 -KHIIDGRTVEAKKAVPRDDQQNINRQSGSAHVSPGPGRTKKIFVGGLPSTITESDFKTY 159
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L ++GK + + A K+
Sbjct: 160 FDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKE 219
Query: 244 AKP 246
P
Sbjct: 220 LSP 222
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 146 AVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPK 205
A G N ++ L K+F+G + D ++L +F YGE+ E + D+ TG+ +
Sbjct: 22 ATTGFCLNFEIRKMESDLGKLFIGGISWDTDEERLKEYFGKYGEVIETVIMRDRVTGRAR 81
Query: 206 GFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
GF V+ A+ ++D +DG+ + + A
Sbjct: 82 GFGFVVFGDPSVAERVIMDK-HIIDGRTVEAKKA 114
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T ++ F +G + + VV+ D T + +G+GFIT+ + L
Sbjct: 140 KKIFVGGLPSTITESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLY 199
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 200 KTFHELNGKMVEVKRAV 216
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 15/176 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT + LR FS +GE+ E V+ D +TG+S+G+GF+TF+ + + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVK- 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V + + + +FA +G + +
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKDYFAQFGRVVD 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
L DK TG+P+GF +++ G A L ++ + GK + KKA+P G
Sbjct: 112 ATLMMDKDTGRPRGFGFVTFESEAGVDACLSTSLE-IHGKPIEV-----KKAQPRG 161
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ +TT + + F+ +G + +A +++DK TG+ +G+
Sbjct: 67 IIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGF 126
Query: 115 GFITFK 120
GF+TF+
Sbjct: 127 GFVTFE 132
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT + L+ F YGE+ EAV++ D+ TG+++G+GF+ F A + +
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV N+G+ +P +KIFVG + + ++ +
Sbjct: 67 -KHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E + L ++GK + + A K+
Sbjct: 126 FDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKPMGPDG----------GGPGNVSMNHGDGMGMVPPSAGGSYG 277
P GP G N N+G G M S+ GSYG
Sbjct: 186 HSP-GPSRSPLVGYNYGLGRNNNFLNNYGQGYNM---SSVGSYG 225
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D D+L +F YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ ++D +DG+ + + A
Sbjct: 61 ERVVMDK-HMIDGRTVEAKKA 80
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F +G + + VV+ D T + +G+GFIT+ + L
Sbjct: 106 KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLH 165
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 166 KTFHELNGKMVEVKRAV 182
>gi|9758790|dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 404
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 13/178 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK--HIDGAMLAL 129
KLFI G+ W+T+ + LR F ++GE+ EAV++ D+ATG+++G+GF+ F ++ ++ L
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 130 KEPSKKIDGRVTVTNLA------VAGNSGNST--NNPVDVSLRKIFVGNVPNDMSADKLL 181
K IDG++ A V N NS+ +P + +KIFVG + + ++ +
Sbjct: 67 KHI---IDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFK 123
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+FA +G I + + +D +T +P+GF Y + E L ++GK + +LA
Sbjct: 124 KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLA 181
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F+ +G + + VV+ D T + +G+GFI++ + L+
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 131 EPSKKIDGRVTVTNLAVAGNSG-NSTNNPVDVS 162
+ +++G++ LAV + N+ N ++V+
Sbjct: 166 KTFHELNGKMVEVKLAVPKDMALNTMRNQMNVN 198
>gi|89257430|gb|ABD64922.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 426
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 99/181 (54%), Gaps = 19/181 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ W+TT + LR F ++GE+ EAV++ D+ATG+++G+GF+ F
Sbjct: 6 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFADPTVAERVVLI 65
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+H IDG ++ K+ + D ++ + +S + +P + +KIFVG + + ++
Sbjct: 66 RHVIDGKIVEAKKAVPRDD------HVVLNRSSSSLQGSPGPATSKKIFVGGLASSVTEA 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+ +FA +G I + + +D +T +P+GF +++ E L ++GK + +L
Sbjct: 120 EFKKYFAQFGTITDVVVMYDHRTQRPRGFGFISFESEEAVDRVLQRTFHELNGKMVEVKL 179
Query: 239 A 239
A
Sbjct: 180 A 180
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDV-LESVRSIADADP---TQRKLFIRGLGWDTTTEG 86
R ++ R D + AV R D V L S P T +K+F+ GL T
Sbjct: 61 RVVLIRHVIDGKIVEAKKAVPRDDHVVLNRSSSSLQGSPGPATSKKIFVGGLASSVTEAE 120
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+ F+ +G + + VV+ D T + +G+GFI+F+ + L+ +++G++ LA
Sbjct: 121 FKKYFAQFGTITDVVVMYDHRTQRPRGFGFISFESEEAVDRVLQRTFHELNGKMVEVKLA 180
Query: 147 V 147
V
Sbjct: 181 V 181
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 22/191 (11%)
Query: 63 IADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHI 122
+ ++D + KLF+ G+ W+T+ E + FS YGE+ ++V+++D+ TG+ +G+GFITF
Sbjct: 191 MGESDEDKEKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADP 250
Query: 123 DGAMLALKEPSKKIDGRVTVTN-------LAVAGNSGNSTNNPVDVSLRKIFVGNVPNDM 175
A L+E IDGR + V G S RKIFVG +P+ +
Sbjct: 251 AVADKVLEE-DHVIDGRAVEVKKTVPREGMEVRGVS----------KTRKIFVGGIPSSL 299
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ D+L +F+ YG I E + D TG+ +GF FV +E A L KT +L
Sbjct: 300 TEDELKDYFSSYGAIVENQIMLDHVTGRSRGFG-FVTFVSEDAVERLFSEGKT---HELG 355
Query: 236 CRLADNKKAKP 246
+L + KKA+P
Sbjct: 356 GKLVEIKKAEP 366
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 112 KGYGFITFKH------------IDGAMLALKEPSKK-IDGRVTVT---------NLAVAG 149
K +GFI H I L+EPSK D V+ G
Sbjct: 125 KEFGFIVMGHEFDSYPQRMICDIKNWNWFLEEPSKDGEDDEVSEKKEKKGTRGKRKQAEG 184
Query: 150 NSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFAL 209
N + D K+FVG + + S + +F+ YGEI + + D+ TG+P+GF
Sbjct: 185 NDDDDWMGESDEDKEKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGF 244
Query: 210 FVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ A A+ D + D ++ R + KK P
Sbjct: 245 ITF-----ADPAVADKVLEED-HVIDGRAVEVKKTVP 275
>gi|224061141|ref|XP_002300356.1| predicted protein [Populus trichocarpa]
gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E L+ FS YGE+ EAV++ D+ TG+++G+GF+ F A + E
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVAERVIME 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+DGR AV + N+ + +P +KIFVG + + ++ + +
Sbjct: 67 -KHVVDGRTVEAKKAVPRDDQHILSRNTSSIHGSPGPGRTKKIFVGGLASTVTENDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L ++GK + + A K+
Sbjct: 126 FEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDD-VLESVRSIADADP---TQRKLFIRGLGWDTTTEG 86
R I+E+ D AV R D +L S P +K+F+ GL T
Sbjct: 62 RVIMEKHVVDGRTVEAKKAVPRDDQHILSRNTSSIHGSPGPGRTKKIFVGGLASTVTEND 121
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+ F +G + + VV+ D T + +G+GFIT+ + L + +++G++ A
Sbjct: 122 FKKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRA 181
Query: 147 V 147
V
Sbjct: 182 V 182
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F+ YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
+ +++ VDG R + KKA P N S HG
Sbjct: 61 ERVIMEK-HVVDG-----RTVEAKKAVPRDDQHILSRNTSSIHG 98
>gi|115482462|ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group]
gi|10716605|gb|AAG21903.1|AC026815_7 putative RNA binding protein [Oryza sativa Japonica Group]
gi|31432618|gb|AAP54226.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113639433|dbj|BAF26738.1| Os10g0470900 [Oryza sativa Japonica Group]
Length = 464
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
Q KLFI G+ W+TT E LR F+AYG++ +A V+ DK TG+ +G+GF+ F AL
Sbjct: 5 QGKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDAAL 64
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTN--NP----------------------------V 159
+P +DGR A++ + NP
Sbjct: 65 VDP-HTLDGRTVDVKRALSREEQQAAKAANPSAGGRHASGGGGGGGGAGGGGGGGGGDAG 123
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
+KIFVG +P++++ D+ +F YG + + + +D+ T +P+GF + +
Sbjct: 124 GARTKKIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVMYDQNTQRPRGFGFITFDAEDAVD 183
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKP 246
L + GK + + A ++A P
Sbjct: 184 RVLHKTFHDLSGKMVEVKRALPREANP 210
>gi|355750652|gb|EHH54979.1| hypothetical protein EGM_04098, partial [Macaca fascicularis]
Length = 326
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVS--REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 213 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 272
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 273 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 332
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 333 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 392
Query: 242 KKAKPMGPDGGGPG------NVSMNHGDGMGMVPPSAGGSYGGPGGHGYP 285
+ +K P G PG V N +G PP GP G P
Sbjct: 393 RDSKSQAP--GQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVP 440
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT + L+ F YGE+ EAV++ D+ TG+++G+GF+ F A + +
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV N+G+ +P +KIFVG + + ++ +
Sbjct: 67 -KHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E + L ++GK + + A K+
Sbjct: 126 FDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKPMGPDG----------GGPGNVSMNHGDGMGMVPPSAGGSYG 277
P GP G N N+G G M S+ GSYG
Sbjct: 186 HSP-GPSRSPLVGYNYGLGRNNNFLNNYGQGYNM---SSVGSYG 225
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D D+L +F YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ ++D +DG+ + + A
Sbjct: 61 ERVVMDK-HMIDGRTVEAKKA 80
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F +G + + VV+ D T + +G+GFIT+ + L
Sbjct: 106 KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLH 165
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 166 KTFHELNGKMVEVKRAV 182
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 10/221 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
AD K+FI GL W+TT +GLR+ F+ YG + E ++ D ATG+S+G+GF+TF+H
Sbjct: 190 ADISKDSCKMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFEHPS 249
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+K +DG+V ++ + + KIFVG + D+ +
Sbjct: 250 SVDEVVKT-QHILDGKVIDPKRSIPKEEQD--------KIGKIFVGGIGTDVRPKEFEEF 300
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
FA +G I + L DK TG+ +GF Y +A+ + GKQ+ + A +
Sbjct: 301 FAQFGTIIDAQLMLDKDTGRSRGFGFITYDSADAVDKVCQNKYIDFKGKQIEVKRAQQRH 360
Query: 244 AKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGY 284
+ D ++ N GMV P G Y P G+
Sbjct: 361 SHGKPADASNSQMLTPNPMATPGMVNP-MGQMYQNPMMPGF 400
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|403283527|ref|XP_003933170.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Saimiri boliviensis boliviensis]
Length = 299
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GFI +
Sbjct: 3 KSESSKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFIRY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
+ A+ K+ GRV AV S + P ++++KIF+G + D
Sbjct: 63 ATAEEVDAAMNARPHKVHGRVVEPKRAV---SREDSQRPGAHLTVKKIFLGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+IE + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKIEVIEIITDRGSGKKRGFAFVAFDDHDSVDMIVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|391328905|ref|XP_003738923.1| PREDICTED: RNA-binding protein squid-like [Metaseiulus
occidentalis]
Length = 299
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 30/192 (15%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
+ + AD RKLF GL +DTT LRS F YGE++E V +D T KS+G+GFITF
Sbjct: 36 TTSTADAEDRKLFCGGLSFDTTDADLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITF-- 93
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-------LRKIFVGNVPND 174
G+ A+++ A+AG +D +K+F G +P +
Sbjct: 94 --GSKQAVED--------------AIAGAPHTIKGKQIDPKAAKARPGAKKVFCGGLPPE 137
Query: 175 MSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL 234
+ +++ +F YG IE L DK+ + +GF Y+T A AA+ P +T++GK+
Sbjct: 138 TTEEEIRTYFGQYGNIEALELPVDKEKNQRRGFIFVTYETTAAADAAVKKPKQTINGKE- 196
Query: 235 NCRLADNKKAKP 246
D KKA P
Sbjct: 197 ----CDVKKATP 204
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
A + + + D ++ TN S +T + D RK+F G + D + L +HF
Sbjct: 6 AQMTTESVEQVEDQKMEATNGDGTDGSNGTTTSTADAEDRKLFCGGLSFDTTDADLRSHF 65
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
YGEI+E + D T K +GF + + + + A+ T+ GKQ++ + A KA
Sbjct: 66 EKYGEIQECTVKMDPMTKKSRGFGFITFGSKQAVEDAIAGAPHTIKGKQIDPKAA---KA 122
Query: 245 KP 246
+P
Sbjct: 123 RP 124
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF + A+
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGRV AVA S V+++K+FVG + D L +F YG+I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREE--SGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKI 126
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 127 DTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F YG++ EA+V+ D T +S+G+GF+TF + L +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DG+ +A + +P V+ +KIFVG + + + + ++F +G I
Sbjct: 90 GTHELDGKKVDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 144
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P
Sbjct: 145 EDAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP 195
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++S F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 170
>gi|449268325|gb|EMC79194.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Columba
livia]
Length = 339
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LRS + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 7 RKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 66
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 67 ARPHT---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 120
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 121 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 173
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 76 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 135
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 136 GKKRGFGFVTFDDHD 150
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 9/181 (4%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGR AV+ +S ++++KIFVG + D L
Sbjct: 90 DAAMCAR---PHKVDGRAVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F YG+IE + D+Q+GK +GFA + + +V T++G + A +K
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEVKKALSK 204
Query: 243 K 243
+
Sbjct: 205 Q 205
>gi|148697232|gb|EDL29179.1| mCG1035404 [Mus musculus]
Length = 239
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 75 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 134
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 135 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 185
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K + + L TV G + ++A K+
Sbjct: 186 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 238
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 39 SDQLLDVLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGEL 97
S + VL R D V++ +++A +K+F+ GL + T E +R F +GE+
Sbjct: 125 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEI 184
Query: 98 EEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
E + +D K +G+ FITFK D L++ + G +A
Sbjct: 185 EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 233
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 130
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
Query: 242 KKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 191 RDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT + L+ F A+GE+ EAV++ D+ATG+++G+GF+ F A + E
Sbjct: 7 KLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTN--------NPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV N+ N +P +KIFVG + + ++ +
Sbjct: 67 K-HLIDGRNVEAKKAVPREDQNTLNKNSSSVNGSPGPARTKKIFVGGLASTVTESDFRKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L ++GK + + A K+
Sbjct: 126 FDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKP 246
P
Sbjct: 186 LSP 188
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+++ L K+F+G + D + D+L +F +GE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MEMELGKLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ +++ +DG+ + + A
Sbjct: 61 ERVVMEK-HLIDGRNVEAKKA 80
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHD-DVLESVRSIADADP---TQRKLFIRGLGWDTTTEG 86
R ++E+ D AV R D + L S + P +K+F+ GL T
Sbjct: 62 RVVMEKHLIDGRNVEAKKAVPREDQNTLNKNSSSVNGSPGPARTKKIFVGGLASTVTESD 121
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
R F +G + + VV+ D T + +G+GFIT+ + L + +++G++ A
Sbjct: 122 FRKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRA 181
Query: 147 V 147
V
Sbjct: 182 V 182
>gi|75074832|sp|Q9TTV2.1|ROA2_SAGOE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1; AltName: Full=Vitamin D response
element-binding protein 2; Short=VDRE-BP 2
gi|6273351|gb|AAF06330.1|AF192348_1 vitamin D response element binding protein [Saguinus oedipus]
Length = 341
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL + TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +FA
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F+ YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 183 AAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 242
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 243 SVDKVMDQKEHKLNGKVIDPKRAKAMK----TKEPV----KKIFVGGLSPDTPEEKIREY 294
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 295 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 354
>gi|223647288|gb|ACN10402.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|223673171|gb|ACN12767.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 384
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D A +S+G+GF+T+ ++
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPANKRSRGFGFVTYAGVNEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A++ K+DGR+ AV S ++ P V+++KIFVG + D L +F
Sbjct: 68 DAAMEARPHKVDGRLVEPKRAV---SREDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+G+IE + D+ +GK +GFA + + ++ T++G R A
Sbjct: 125 EQFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDAVDRIVIQKYHTLNGHNCEVRKA 179
>gi|301753349|ref|XP_002912535.1| PREDICTED: hypothetical protein LOC100472152 [Ailuropoda
melanoleuca]
Length = 642
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 377 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 436
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 437 SVDKVMDQKEHKLNGKVIDPKRAKAMK----TKEPV----KKIFVGGLSPDTPEEKIREY 488
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 489 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 548
>gi|119589908|gb|EAW69502.1| DAZ associated protein 1, isoform CRA_b [Homo sapiens]
Length = 405
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGR---------------VTVTNLAVAG-NSGNSTNNPVDVSLRKIFVGNVPNDM 175
+DGR T G S NS +N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDNSKSN-------KIFVGGIPHNC 123
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+L +F +G + E + +D + +P+GF ++ + A+ + GK++
Sbjct: 124 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 183
Query: 236 CRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ A+ + +K P G PG G +VP +A G G P
Sbjct: 184 VKRAEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 221
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 27 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 86
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR----------KIFVGNVPNDMSADKL 180
+DGR P + + KIFVG +P++ +L
Sbjct: 87 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETEL 146
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 147 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 206
Query: 241 NKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G ++P +A G G P
Sbjct: 207 PRDSKSQVP--GQPGASQW----GSRLMPNAANGWAGQP 239
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
++ RK+FVG + + + L ++F+ YGE+ + + DK T + +GF +K
Sbjct: 23 ELKTRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVG 82
Query: 220 AALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
L T+DG+ ++ KP P G P G
Sbjct: 83 TVLASRPHTLDGRNID--------PKPCTPRGMQPERTRPKEG 117
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 46 LSSAVARHDDVLESVRSIADADPTQR-KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVIL 104
LSS + + R A + +R K+F+ GL WDT+ + L+ F+ +GE+ + + +
Sbjct: 12 LSSYCCQACRTIPRPRGDARVERERRTKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKM 71
Query: 105 DKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR 164
D TG+S+G+GFI FK L + ++DGRV A+A +PV +
Sbjct: 72 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMA-----MKKDPV----K 122
Query: 165 KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD 224
KIFVG + + + +K+ +F +GEIE L D +T K +GF +K E + L
Sbjct: 123 KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEK 182
Query: 225 PIKTVDGKQLNCRLADNKKA 244
T+ G + ++A K+
Sbjct: 183 KFHTISGSKCEIKVAQPKEV 202
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 188 AEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|441657453|ref|XP_004091180.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 379
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HI 122
+P Q RKLFI L ++TT + LR F +G L + VV+ D T +S+G+GF+ + +
Sbjct: 30 EPEQLRKLFIGDLSFETTDDSLREYFEKWGTLTDCVVMRDAQTKRSRGFGFVAYSCVTEV 89
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG++ D L
Sbjct: 90 DAAMCA--RPC-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGSIKEDTEEYNLRD 144
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 145 YFEKYGKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKTVVQKYHTINGH--NCEV 198
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 188 AEPRDSKSQAP--GQPGASQW----GSRIVPNAANGWAGQP 222
>gi|291394515|ref|XP_002713754.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|348511912|ref|XP_003443487.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 301
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL DT +GLR F YG L + VV+++K +S+ +GF+T+ + A A+
Sbjct: 7 KLFVGGLNVDTDDDGLRKHFEQYGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADAAMAA 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG AVA N V +KIFVG + +D+ L +F+ YG++E
Sbjct: 67 RPHTVDGNAVEVKRAVAREDANKPEALAKV--KKIFVGGLKDDIEEQHLTEYFSQYGQVE 124
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+ + +K+TGK +GF + + A A+V TV G ++ + A K+
Sbjct: 125 KSEVISEKETGKKRGFGFVYFTDHDAADKAVVVKFHTVKGHKVEVKKALTKQ 176
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 55 DVLESVRSIADADPTQ-------RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKA 107
+ +E R++A D + +K+F+ GL D + L FS YG++E++ VI +K
Sbjct: 74 NAVEVKRAVAREDANKPEALAKVKKIFVGGLKDDIEEQHLTEYFSQYGQVEKSEVISEKE 133
Query: 108 TGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNN 157
TGK +G+GF+ F D A A+ + G A+ + N
Sbjct: 134 TGKKRGFGFVYFTDHDAADKAVVVKFHTVKGHKVEVKKALTKQEMQAANR 183
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
L K+FVG + D D L HF YG + + + +KQ + + F Y T E A AA
Sbjct: 4 QLCKLFVGGLNVDTDDDGLRKHFEQYGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADAA 63
Query: 222 LVDPIKTVDGKQLNCRLA 239
+ TVDG + + A
Sbjct: 64 MAARPHTVDGNAVEVKRA 81
>gi|240848911|ref|NP_001155674.1| heterogeneous nuclear ribonucleoprotein-like [Acyrthosiphon pisum]
gi|239790977|dbj|BAH72014.1| ACYPI006706 [Acyrthosiphon pisum]
Length = 283
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W+TT + L+ F YGE+ + D ATG+S+G+ FI FK +DG A
Sbjct: 33 RKLFVGGLSWETTEKELKEHFVQYGEITNISLKTDPATGRSRGFAFIIFKSVDGLNNAFA 92
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
I+G+ A A K+FVG +P+D++ D++ F +G I
Sbjct: 93 AGDHVINGKKIDPKKAKAKQE-------------KVFVGGLPSDVTNDEIKEFFGKWGVI 139
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ FDK + KG+ Y++++ Q +T+ GK+++ + A K A P
Sbjct: 140 VNLEVPFDKMKNQRKGYCFITYESSDKVQDLFKTAKQTIKGKEVDVKKAAPKPANPYANP 199
Query: 251 GGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGY 284
G G G PP YGG GY
Sbjct: 200 KAMRG-----RGAARGAYPPQGYDYYGGATYPGY 228
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 43 LDVLSSAVARHDDVLESVR-SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAV 101
+D L++A A D V+ + A Q K+F+ GL D T + ++ F +G +
Sbjct: 84 VDGLNNAFAAGDHVINGKKIDPKKAKAKQEKVFVGGLPSDVTNDEIKEFFGKWGVIVNLE 143
Query: 102 VILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGR 139
V DK + KGY FIT++ D K + I G+
Sbjct: 144 VPFDKMKNQRKGYCFITYESSDKVQDLFKTAKQTIKGK 181
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F +GE++E +V+ D T +S+G+GF+T+ G L +
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 83 NRHELDSKTIDPKVAFPRRA-----QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKV 137
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 138 DDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVM 192
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 193 TPTGSARGR 201
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 39/53 (73%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF++ D
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENED 163
>gi|109109574|ref|XP_001086021.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Macaca mulatta]
Length = 267
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 115/264 (43%), Gaps = 36/264 (13%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFIRG+ ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P +++K FVG++ D L +F
Sbjct: 69 DAAINARPHKVDGRVVEPKRAV---SREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 DQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQE 185
Query: 245 KPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPG 304
M S G G G ++ G
Sbjct: 186 --------------------MASASSSQRGRSGSGNFGGGSYN-----------DFGNCN 214
Query: 305 QVPSSMGGVGAGGYGAGLGGPYGG 328
S+ G + G +G GPYGG
Sbjct: 215 NQSSNFGPMKGGNFGGRSSGPYGG 238
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 21/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR F YG++ EA+V+ D T +S+G+GF+TF + L +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DG+ +A + +P V+ +KIFVG + + + + ++F +G I
Sbjct: 90 GTHELDGKKVDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 144
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
E+ L FDKQT + +GF +++ + +VD + + ++N ++ + KKA+P +
Sbjct: 145 EDAMLMFDKQTNRHRGFGFVTFQSED-----VVDKVCEIHFHEINNKMVECKKAQP--KE 197
Query: 251 GGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPP 291
P N++ G +Y G P + P P
Sbjct: 198 VMLPANLAKTRAAG--------RSAYAGAAPGLLPLANPAP 230
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++S F +G +E+A+++ DK T + +G+GF+TF+ D
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 170
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 26 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 85
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D L +F +G I
Sbjct: 86 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSLRDYFQNFGNI 143
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA + + VD + QL ++ D KKA P D
Sbjct: 144 VDINIVMDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLKGKMVDVKKALPKQSD 198
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + LR F +G + + +++DK TGK +G+ F+ F D
Sbjct: 115 TVKKLFVGALKDDHDEQSLRDYFQNFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 174
Query: 129 LKEPSKKIDGRVTVTNLAVAGNS 151
+ + ++ G++ A+ S
Sbjct: 175 VLQKQHQLKGKMVDVKKALPKQS 197
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 16/194 (8%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP K+FI GL W TT EGL+ F +GE++E +V+ D T +S+G+GF+T+ G
Sbjct: 20 DPC--KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVE 77
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFA 185
L + ++D + +A + P V+ +KIFVG + + + + + +F
Sbjct: 78 KVLAQNRHELDSKTIDPKVAFPRRA-----QPKLVTRTKKIFVGGLSVNTTIEDVKQYFD 132
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+G++++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+
Sbjct: 133 QFGKVDDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQ 187
Query: 246 P---MGPDGGGPGN 256
P M P G G
Sbjct: 188 PKEVMTPTGSARGR 201
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F +GE++E++V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 TRHELDSKTIDPKVAFPRRA-----QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSSRGR 199
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 97/177 (54%), Gaps = 11/177 (6%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RK+FI GL W T+ EGLR FS +G++ E +V+ D T +S+G+GF+TF L
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGE 189
++DG+ +A + +P V+ +KIFVG + + D + +F +G
Sbjct: 62 SAPHELDGKKIDPKVAFPRRA-----HPKMVTRTKKIFVGGLSAPSTVDDVKGYFEQFGR 116
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+E+ L FDKQT + +GFA +++ + +VD + + ++N ++ + KKA+P
Sbjct: 117 VEDAMLMFDKQTNRHRGFAFVTFESED-----VVDKVCEIHFHEINNKMVECKKAQP 168
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F +GE++E +V+ D T +S+G+GF+T+ G L +
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 83 NRHELDSKTIDPKVAFPRRA-----QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKV 137
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 138 DDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVM 192
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 193 TPTGSARGR 201
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 39/53 (73%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF++ D
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENED 163
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 87 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 146
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 147 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 197
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D ++ K +GF +K E + L T+ G + ++A K+
Sbjct: 198 AIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 250
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 143 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 202
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D + K +G+ FITFK +EP KK+
Sbjct: 203 MDPKSNKRRGFVFITFKE--------EEPVKKV 227
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 21 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 81 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 136 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 186
>gi|357123817|ref|XP_003563604.1| PREDICTED: uncharacterized protein LOC100823039 [Brachypodium
distachyon]
Length = 282
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 60/86 (69%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F AYG++ EAVVI D+ATG+SKGYGF+TF+ + A
Sbjct: 38 DTTYTKVFVGGLAWETRSEGLRAHFEAYGDILEAVVITDRATGRSKGYGFVTFRDPESAR 97
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSG 152
+A +P IDGR NLA+ G G
Sbjct: 98 MACMDPYPVIDGRRANCNLAILGRPG 123
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YG+I E + D+ TG+ KG+ ++ E A+
Sbjct: 38 DTTYTKVFVGGLAWETRSEGLRAHFEAYGDILEAVVITDRATGRSKGYGFVTFRDPESAR 97
Query: 220 AALVDPIKTVDGKQLNCRLA 239
A +DP +DG++ NC LA
Sbjct: 98 MACMDPYPVIDGRRANCNLA 117
>gi|291233795|ref|XP_002736841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein at 27C-like
[Saccoglossus kowalevskii]
Length = 540
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL W++T + L+ F YGE+ + V++ D T +S+G+GF+ FK AL
Sbjct: 9 KIFVGGLSWESTQDSLQKHFMKYGEVIDCVIMKDPITQRSRGFGFVKFKDPVCVQTALAG 68
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS--LRKIFVGNVPNDMSADKLLAHFACYGE 189
+DGR + T S ++K+F+G +P + + D + F+ +G+
Sbjct: 69 APHILDGRTIDPKPCTPRSQQQKTQQMGQFSGRVKKVFIGGIPPNCNEDDINNFFSQFGQ 128
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+ E + +D+Q +P+GF +++ + + T++GK + C+ A+ + +
Sbjct: 129 VTEFIMMYDQQQKRPRGFGFLSFESEDIVEKVCTIRYHTINGKTVECKKAEPRDVR 184
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 39/76 (51%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+FI G+ + + + + FS +G++ E +++ D+ + +G+GF++F+ D
Sbjct: 103 KKVFIGGIPPNCNEDDINNFFSQFGQVTEFIMMYDQQQKRPRGFGFLSFESEDIVEKVCT 162
Query: 131 EPSKKIDGRVTVTNLA 146
I+G+ A
Sbjct: 163 IRYHTINGKTVECKKA 178
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 188 AEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 117
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 118 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 177
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 178 AEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 212
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 188 AEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDYSKSNKIFVGGIPHNCGETELR 130
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
Query: 242 KKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 191 RDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 188 AEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|74214542|dbj|BAE31119.1| unnamed protein product [Mus musculus]
gi|74214594|dbj|BAE31140.1| unnamed protein product [Mus musculus]
Length = 405
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD---------VSLRKIFVGNVPNDMSADKLLA 182
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPEQTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELRE 130
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G + E + +D + +P+GF ++ + A+ + + GK++ + A+ +
Sbjct: 131 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFRDIMGKKVEVKRAEPR 190
Query: 243 KAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+K P G PG G + P +A G G P
Sbjct: 191 DSKNQAP--GQPGASQW----GSRVAPSAANGWAGQP 221
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
L SV + P+ K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF
Sbjct: 4 LTSVLTSVMFSPSS-KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 62
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDM 175
+TF L +P ++D + +A + P V+ +KIFVG + +
Sbjct: 63 VTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANT 117
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ + +F +G++E+ L FDK T + +GF ++ + +V+ + + ++N
Sbjct: 118 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEIN 172
Query: 236 CRLADNKKAKP 246
++ + KKA+P
Sbjct: 173 NKMVECKKAQP 183
>gi|297796435|ref|XP_002866102.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
gi|297311937|gb|EFH42361.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 38/219 (17%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT E LR FS YG++ EAV++ D+ATG+++G+GFI F
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIME 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLA-------VAGNSGNSTNNPVDVSLRKIFVGNV 171
KH IDG + K+ + D +V + + V G G T +KIFVG +
Sbjct: 67 KHIIDGRTVEAKKAVPRDDQQVLKRHASPIQLMSPVHGGGGGRT--------KKIFVGGL 118
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P+ ++ ++ +F +G I + + +D T +P+GF + + + L ++G
Sbjct: 119 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 178
Query: 232 KQLNCRLADNKKAKPMGPD----------GGGPGNVSMN 260
K + + A K+ P+ + GGG +S N
Sbjct: 179 KLVEVKRAVPKETSPVSNNRSPLPGGLNYGGGSNRISAN 217
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T E ++ F +G + + VV+ D T + +G+GFITF D L
Sbjct: 111 KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH 170
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNN 157
+ +++G++ AV + +NN
Sbjct: 171 KTFHELNGKLVEVKRAVPKETSPVSNN 197
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F+ YG++ E + D+ TG+ +GF V+ +
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ +++ +DG+ + + A
Sbjct: 61 ERVIMEK-HIIDGRTVEAKKA 80
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT + L+ FS +GE+ E V+ D A+G+S+G+GF+TFK + + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVK- 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V + + +F +G + +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQEATEQDFKEYFMQFGRVVD 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
L DK TG+P+GF + + A L P++ + GK + KKA+P G
Sbjct: 112 ATLMMDKDTGRPRGFGFVTFDSEAAVDACLDSPLEIL-GKPIEV-----KKAQPRG 161
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DAR + + + LD +++ R+I D K+F+ G+ + T
Sbjct: 45 LTFKDARTVNIVMVKEHYLD---------GKIIDPKRAIPRDEQERTSKIFVGGVSQEAT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVT 143
+ + F +G + +A +++DK TG+ +G+GF+TF L P + + + V
Sbjct: 96 EQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACLDSPLEILGKPIEVK 155
Query: 144 NLAVAGN 150
GN
Sbjct: 156 KAQPRGN 162
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 188 AEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|156055736|ref|XP_001593792.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980]
gi|154703004|gb|EDO02743.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 521
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 33/203 (16%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + L+ FS +GE+ E V+ D A+G+S+G+GF+TFK + + +
Sbjct: 18 KMFIGGLNWETTDQSLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVK 77
Query: 132 PSKKIDGRVTVTNLAVAGNSGNS---------TNN---------------PVDVSLR--K 165
+DG++ +L NS S + N P D R K
Sbjct: 78 -EHYLDGKIVRPDLKTFNNSLRSYPSKFHYLASKNISSHSNFKIDPKRAIPRDEQERTSK 136
Query: 166 IFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDP 225
IFVG V D S +F +G + + L DK TG+P+GF + + +A L P
Sbjct: 137 IFVGGVSQDASEQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEGP 196
Query: 226 IKTVDGKQLNCRLADNKKAKPMG 248
++ + GK + KKA+P G
Sbjct: 197 LE-IHGKPIEV-----KKAQPRG 213
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 45 VLSSAVARHDDV-LESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVV 102
+ S ++ H + ++ R+I D K+F+ G+ D + + + F +G + +A +
Sbjct: 107 LASKNISSHSNFKIDPKRAIPRDEQERTSKIFVGGVSQDASEQDFKEYFMQFGRVVDATL 166
Query: 103 ILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGR-VTVTNLAVAGN 150
++DK TG+ +G+GF+TF + A+ A E +I G+ + V GN
Sbjct: 167 MMDKDTGRPRGFGFVTFDS-EAAVEACLEGPLEIHGKPIEVKKAQPRGN 214
>gi|269063716|emb|CAS85143.1| squid, variant D [Blattella germanica]
Length = 294
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W+TT + LR F YGE+E V D TG+S+G+ FI F D
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS------ 112
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKLLAHFACYG 188
ID ++ + + N +P R KIFVG + D+S D + + FA YG
Sbjct: 113 -----IDKVLSAGDHVI----NNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYG 163
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I E + FDK + KGF +++ + Q L P ++++GK+++ + A
Sbjct: 164 TIVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
>gi|269063714|emb|CAS85142.1| squid, variant C [Blattella germanica]
Length = 318
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W+TT + LR F YGE+E V D TG+S+G+ FI F D
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS------ 112
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKLLAHFACYG 188
ID ++ + + N +P R KIFVG + D+S D + + FA YG
Sbjct: 113 -----IDKVLSAGDHVI----NNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYG 163
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I E + FDK + KGF +++ + Q L P ++++GK+++ + A
Sbjct: 164 TIVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
>gi|440901911|gb|ELR52772.1| Heterogeneous nuclear ribonucleoprotein A3, partial [Bos grunniens
mutus]
Length = 182
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 1 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 60
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 61 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 115
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 116 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 169
>gi|414887334|tpg|DAA63348.1| TPA: hypothetical protein ZEAMMB73_769138, partial [Zea mays]
Length = 467
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T + LR+ F +GE+ EAV++ D+ TG+++G+GF+ F
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D ++A + +S +P RKIFVG + ++++
Sbjct: 67 KHMIDGRMVEAKKAVPRDD-------QSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEV 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+ +F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 120 EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR 179
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 180 AVPKEQSP 187
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVLESVRSIADADP---TQRKLFIRGLGWDTTT 84
I ER+T D+ ++D AV R D + S + + P RK+F+ GL + T
Sbjct: 59 IAERVTLDKHMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTE 118
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTN 144
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 119 VEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVK 178
Query: 145 LAV 147
AV
Sbjct: 179 RAV 181
>gi|291389620|ref|XP_002711397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LRS F +G L + VV+ D T S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L HF
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGDFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L T+ G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 234
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 188 AEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L TV G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L TV G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|269063712|emb|CAS85141.1| squid, variant B [Blattella germanica]
Length = 317
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W+TT + LR F YGE+E V D TG+S+G+ FI F D
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS------ 112
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKLLAHFACYG 188
ID ++ + + N +P R KIFVG + D+S D + + FA YG
Sbjct: 113 -----IDKVLSAGDHVI----NNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYG 163
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I E + FDK + KGF +++ + Q L P ++++GK+++ + A
Sbjct: 164 TIVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
>gi|269063710|emb|CAS85140.1| squid, variant A [Blattella germanica]
Length = 341
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W+TT + LR F YGE+E V D TG+S+G+ FI F D
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS------ 112
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKLLAHFACYG 188
ID ++ + + N +P R KIFVG + D+S D + + FA YG
Sbjct: 113 -----IDKVLSAGDHVI----NNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYG 163
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I E + FDK + KGF +++ + Q L P ++++GK+++ + A
Sbjct: 164 TIVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
>gi|256081430|ref|XP_002576973.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645372|emb|CCD59901.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 381
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 21/184 (11%)
Query: 62 SIADA-DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S+ D D RKLF+ GL W+T L+ FS +G++ + ++ LD+ TG S+G+GF+T +
Sbjct: 41 SVTDENDDDSRKLFVGGLSWETNENDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLE 100
Query: 121 HIDGAMLALKEP-----SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDM 175
D L P +KKID + P L+KIFVG + ++
Sbjct: 101 SEDCVSKVLSVPEHWLKNKKIDPKKA---------------KPSREPLKKIFVGGIDPEV 145
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ D++ +F+ +G++E L +D Q GK K + + T A+ A+ + + G+Q +
Sbjct: 146 TEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAAKKAISKERQDIFGRQCD 205
Query: 236 CRLA 239
R+A
Sbjct: 206 VRVA 209
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ G+ + T + +R FS++G++E + D GK K Y F++F A A+
Sbjct: 134 KKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAAKKAIS 193
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPN 173
+ + I GR +AV + N V+L++ + PN
Sbjct: 194 KERQDIFGRQCDVRVAVTRDQANRQK----VALKQWYNWLDPN 232
>gi|226494259|ref|NP_001146396.1| uncharacterized protein LOC100279976 [Zea mays]
gi|219887017|gb|ACL53883.1| unknown [Zea mays]
gi|223975747|gb|ACN32061.1| unknown [Zea mays]
Length = 470
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T + LR+ F +GE+ EAV++ D+ TG+++G+GF+ F
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D ++A + +S +P RKIFVG + ++++
Sbjct: 67 KHMIDGRMVEAKKAVPRDD-------QSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEV 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+ +F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 120 EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR 179
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 180 AVPKEQSP 187
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVLESVRSIADADP---TQRKLFIRGLGWDTTT 84
I ER+T D+ ++D AV R D + S + + P RK+F+ GL + T
Sbjct: 59 IAERVTLDKHMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTE 118
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTN 144
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 119 VEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVK 178
Query: 145 LAV 147
AV
Sbjct: 179 RAV 181
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L TV G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|70935654|ref|XP_738883.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56515450|emb|CAH75094.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 321
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 15/223 (6%)
Query: 10 DENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPT 69
D N + D ES + R+++ L+ +QL+D+L++A + H+D+ + + P+
Sbjct: 45 DLNDKKIKDEESE----VEQLRRLIAPLSKEQLIDILATAASIHEDIRDKCNEAVTSSPS 100
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
R+L +R + + T E F +GE+E+ +++ +K G+SKGYGF+TFK+I+ L
Sbjct: 101 TRRLMVRNIPFSTKDEQFLKYFETFGEIEDGIIVREKE-GRSKGYGFVTFKYIESVQKCL 159
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K + +D + L + + N K+FV N+ + L F YG+
Sbjct: 160 K-SNHTLDNKDLQVRLVADPFTDHYQN--------KLFVRNLSQKTNVTTLRNIFEKYGK 210
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
+EE + D + GK KG+ + + + A + P + +D +
Sbjct: 211 LEECVIIHDNE-GKSKGYGFLTFSSPKEAFKVMQQPERIIDNR 252
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 59 SVRSIAD--ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
VR +AD D Q KLF+R L T LR+IF YG+LEE V+I D GKSKGYGF
Sbjct: 171 QVRLVADPFTDHYQNKLFVRNLSQKTNVTTLRNIFEKYGKLEECVIIHDNE-GKSKGYGF 229
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNN 157
+TF A +++P + ID RV + AV+ N NN
Sbjct: 230 LTFSSPKEAFKVMQQPERIIDNRVVFLHFAVSQNYKKYQNN 270
>gi|256081434|ref|XP_002576975.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645374|emb|CCD59903.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 380
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 21/184 (11%)
Query: 62 SIADA-DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
S+ D D RKLF+ GL W+T L+ FS +G++ + ++ LD+ TG S+G+GF+T +
Sbjct: 41 SVTDENDDDSRKLFVGGLSWETNENDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLE 100
Query: 121 HIDGAMLALKEP-----SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDM 175
D L P +KKID + P L+KIFVG + ++
Sbjct: 101 SEDCVSKVLSVPEHWLKNKKIDPKKA---------------KPSREPLKKIFVGGIDPEV 145
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ D++ +F+ +G++E L +D Q GK K + + T A+ A+ + + G+Q +
Sbjct: 146 TEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAAKKAISKERQDIFGRQCD 205
Query: 236 CRLA 239
R+A
Sbjct: 206 VRVA 209
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ G+ + T + +R FS++G++E + D GK K Y F++F A A+
Sbjct: 134 KKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAAKKAIS 193
Query: 131 EPSKKIDGRVTVTNLAVAGNSGN 153
+ + I GR +AV + N
Sbjct: 194 KERQDIFGRQCDVRVAVTRDQAN 216
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 115 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 172
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V + + P RKIF+G +P ++ D+L HF+ YG
Sbjct: 173 --EDDHVIDGRTVEVKRTVPREEMITKDGP---KTRKIFIGGLPPSLTEDELKDHFSSYG 227
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 228 NVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 283
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
+T D I + L D ++D + V R + I P RK+FI GL T
Sbjct: 160 VTFSDPSVIDKVLEDDHVIDGRTVEVKR---TVPREEMITKDGPKTRKIFIGGLPPSLTE 216
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
+ L+ FS+YG + E ++LD +TG+S+G+GFITF+ D + E
Sbjct: 217 DELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISE 263
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
SL KIFVG V + + + HF YG I + + DK T P+GF +
Sbjct: 112 SLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 171
Query: 222 LVDPIKTVDGKQLNCR 237
L D +DG+ + +
Sbjct: 172 LEDD-HVIDGRTVEVK 186
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D ++ K +GF +K E + L T+ G + ++A K+
Sbjct: 182 AIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 234
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 45 VLSSAVARHD-DVLESVRSIA-DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVV 102
VL R D V++ +++A DP +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIEL 185
Query: 103 ILDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D + K +G+ FITFK +EP KK+
Sbjct: 186 PMDPKSNKRRGFVFITFKE--------EEPVKKV 211
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F +GE++E++V+ D T +S+G+GF+TF G L +
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D + +A + P V+ +KIFVG + + + + + +F +G++
Sbjct: 81 TRHELDSKTIDPKVAFPRRA-----QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKV 135
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---M 247
++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVM 190
Query: 248 GPDGGGPGN 256
P G G
Sbjct: 191 SPTGSSRGR 199
>gi|390457874|ref|XP_003732018.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTYCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+D RV AV S + P ++++ IFVG + D L +F
Sbjct: 69 DAAMNARPHKVDRRVVEPKRAV---SREDSQRPGAHLTVKNIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMMDRGSGKKRGFAFVTFDNHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 127
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 188 AEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 23/191 (12%)
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
I+D P K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK
Sbjct: 146 ECISDDAPD--KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFK 203
Query: 121 H---IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSA 177
++ M+ +DG++ A+ + T+ KIFVG V + +
Sbjct: 204 DPKTVNTVMVK----EHYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQEATE 251
Query: 178 DKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCR 237
F +G + + L DK +G+P+GF + + +A L P++ + GK +
Sbjct: 252 QDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL-GKPIEV- 309
Query: 238 LADNKKAKPMG 248
KKA+P G
Sbjct: 310 ----KKAQPRG 316
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ + T + + F +G + +A +++DK +G+ +G+
Sbjct: 222 IIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGF 281
Query: 115 GFITF 119
GF+TF
Sbjct: 282 GFVTF 286
>gi|221054600|ref|XP_002258439.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808508|emb|CAQ39211.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 340
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 6 KRKIDE----NGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVR 61
K+ +DE N + D ES + R+++ L+ +QL+D+L+++ H D+ +
Sbjct: 22 KKSVDEEISANDKTVKDEESE----AESLRRLIAPLSKEQLIDILATSALIHQDIRDKCN 77
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
+ P+ R+L +R + + T E F +GE+E+ +++ +K G+SKGYGF+TFK
Sbjct: 78 EAVASSPSTRRLMVRNIPFSTRDEQFLKYFETFGEIEDGIIVREKE-GRSKGYGFVTFKF 136
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLL 181
++ LK S +D + L + + N K+FV N+ + L
Sbjct: 137 VESVQKCLK-SSHTLDNKELQVRLVADPFTDHYQN--------KLFVRNLSQKTNVATLR 187
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGK 232
F YG++EE + D + GK KG+ + + + A + P + +D +
Sbjct: 188 GIFEKYGKLEECVIIHDNE-GKSKGYGFLTFSSPKEAFKVMQQPERIIDNR 237
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 59 SVRSIAD--ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
VR +AD D Q KLF+R L T LR IF YG+LEE V+I D GKSKGYGF
Sbjct: 156 QVRLVADPFTDHYQNKLFVRNLSQKTNVATLRGIFEKYGKLEECVIIHDNE-GKSKGYGF 214
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNN 157
+TF A +++P + ID RV + AV+ N NN
Sbjct: 215 LTFSSPKEAFKVMQQPERIIDNRVVFLHFAVSQNYKKFQNN 255
>gi|213625123|gb|AAI69881.1| Unknown (protein for MGC:196608) [Xenopus laevis]
Length = 348
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G+L + VV+ D T +S+G+GF+T+ ++
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
++ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSRE--DSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFE 139
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++ NC +
Sbjct: 140 GYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLH--NCEV 190
>gi|410914421|ref|XP_003970686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Takifugu rubripes]
Length = 300
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL T EGLR F YG+L + VV+++ G+S+ +GFIT+ + A A+
Sbjct: 7 KLFVGGLNVQTNDEGLRQYFEKYGQLSDCVVVMNNQLGRSRCFGFITYSTPEEADTAMAA 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG AVA + N V +++KIFVG V + + A L +F+ +G +E
Sbjct: 67 SPHVVDGHNVELKRAVARQDAD--NPEVLANVKKIFVGGVQDHIEAQHLTDYFSQFGAVE 124
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + DK TGK +GF + + A A++ T+ G ++ + A K+ G
Sbjct: 125 KAEIISDKLTGKKRGFGFVFFVDTDSATKAVLTRYHTISGNKVEAKKAMTKQEMSTG 181
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 46 LSSAVARHD----DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAV 101
L AVAR D +VL +V+ K+F+ G+ + L FS +G +E+A
Sbjct: 78 LKRAVARQDADNPEVLANVK----------KIFVGGVQDHIEAQHLTDYFSQFGAVEKAE 127
Query: 102 VILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDG 138
+I DK TGK +G+GF+ F D A A+ I G
Sbjct: 128 IISDKLTGKKRGFGFVFFVDTDSATKAVLTRYHTISG 164
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+ +L K+FVG + + + L +F YG++ + + + Q G+ + F Y T E A
Sbjct: 1 MSTALTKLFVGGLNVQTNDEGLRQYFEKYGQLSDCVVVMNNQLGRSRCFGFITYSTPEEA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
A+ VDG + + A
Sbjct: 61 DTAMAASPHVVDGHNVELKRA 81
>gi|440910410|gb|ELR60208.1| DAZ-associated protein 1, partial [Bos grunniens mutus]
Length = 386
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G ++N KIFVG +P++
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDN---SKSNKIFVGGIPHNCGET 117
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 118 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 177
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G +VP +A G G P
Sbjct: 178 AEPRDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 212
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D ++ K +GF +K E + L T+ G + ++A K+
Sbjct: 182 AIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 234
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D + K +G+ FITFK +EP KK+
Sbjct: 187 MDPKSNKRRGFVFITFKE--------EEPVKKV 211
>gi|74209393|dbj|BAE23274.1| unnamed protein product [Mus musculus]
Length = 301
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQEYHTINGHNAEVRKA 175
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|255576302|ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT E L+ FS YGE+ EAV++ D+ TG+++G+GF+ F
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVIVD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG + K+ + D + N + S P +KIFVG + + ++ +
Sbjct: 67 KHMIDGRTVEAKKAVPRDDQHILNRNTSSIHGS------PGPGRTKKIFVGGLASTVTDN 120
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + + L ++GK + +
Sbjct: 121 DFKKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR 180
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 181 AVPKELSP 188
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F+ YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ +VD +DG+ + + A
Sbjct: 61 ERVIVDK-HMIDGRTVEAKKA 80
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDD-VLESVRSIADADP---TQRKLFIRGLGWDTTTEG 86
R IV++ D AV R D +L S P +K+F+ GL T
Sbjct: 62 RVIVDKHMIDGRTVEAKKAVPRDDQHILNRNTSSIHGSPGPGRTKKIFVGGLASTVTDND 121
Query: 87 LRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+ F +G + + VV+ D T + +G+GFIT+ D L + +++G++ A
Sbjct: 122 FKKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKRA 181
Query: 147 V 147
V
Sbjct: 182 V 182
>gi|449463715|ref|XP_004149577.1| PREDICTED: uncharacterized protein LOC101220541 [Cucumis sativus]
gi|449517233|ref|XP_004165650.1| PREDICTED: uncharacterized protein LOC101224873 [Cucumis sativus]
Length = 480
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT E LR F YGE+ EAV++ D+ TG+++G+GF+ F A + +
Sbjct: 7 KLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVAERVILD 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTN--------NPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV + N N +P +KIFVG + + ++ +
Sbjct: 67 K-HVIDGRTVEAKKAVPKDDQNMLNRSSGSIHGSPSSGRTKKIFVGGLASTVTEADFQKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E L ++GK + + A K+
Sbjct: 126 FDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKRAIPKE 185
Query: 244 AKPMGPD 250
P GP+
Sbjct: 186 LTP-GPN 191
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKPM 247
+ ++D +DG+ + + A K + M
Sbjct: 61 ERVILDK-HVIDGRTVEAKKAVPKDDQNM 88
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F +G + + VV+ D +T + +G+GFIT+ + L
Sbjct: 106 KKIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLH 165
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ A+
Sbjct: 166 KTFHELNGKMVEVKRAI 182
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 22/182 (12%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ G+ W+T+ E + FS YGE+ ++V+++D+ TG+ +G+GFITF A L+E
Sbjct: 52 KLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEE 111
Query: 132 PSKKIDGRVTVTN-------LAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
IDGR + V G S RKIFVG +P+ ++ D+L +F
Sbjct: 112 -DHVIDGRAVEVKKTVPREGMEVRGVS----------KTRKIFVGGIPSSLTEDELKDYF 160
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+ YG I E + D TG+ +GF FV +E A L KT +L +L + KKA
Sbjct: 161 SSYGAIVENQIMLDHVTGRSRGFG-FVTFVSEDAVERLFSEGKT---HELGGKLVEIKKA 216
Query: 245 KP 246
+P
Sbjct: 217 EP 218
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RK+F+ G+ T + L+ FS+YG + E ++LD TG+S+G+GF+TF D
Sbjct: 140 RKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFS 199
Query: 131 E 131
E
Sbjct: 200 E 200
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + P V+ +KIFVG + + + + + +F +G+++
Sbjct: 61 RHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVD 115
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MG 248
+ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVMS 170
Query: 249 PDGGGPGN 256
P G G
Sbjct: 171 PTGSARGR 178
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 88 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 140
>gi|403309130|ref|XP_003944981.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 385
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 2/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F + L + VV+ D T +S+G+GF+T+ ++
Sbjct: 73 EPEQLRKLFIGGLSFETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 132
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ + V +KIFVG + D L +F
Sbjct: 133 DAAMNARPHKVDGRVVEPKRAVSRGDSRRPGAHLTVK-KKIFVGGIKEDAEEHHLRDYFE 191
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 192 QYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHGCEVRKALSKQ 249
>gi|346469143|gb|AEO34416.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 63 IADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHI 122
+A + Q K+F+ GL W+TT E L + FS +GE+ + VV+ ++ TG+S+G+GF+TF+
Sbjct: 1 MARQNEEQGKIFVGGLSWETTQESLLNYFSRFGEVVDCVVMCNE-TGRSRGFGFVTFRDP 59
Query: 123 DGAMLALKEPSKKIDGRVT---VTNLAVAGNSGNSTNNPVDVSLR------KIFVGNVPN 173
L ++DGR N A G P +R KIFVG +P
Sbjct: 60 SCVATVLAGGPHQLDGRTVDPKSCNPRGASRPGGGGGGPGARGVRTKGSSTKIFVGGLPA 119
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ L A F+ YG++ E + +D++ + +GF +++ E + GKQ
Sbjct: 120 TVTETDLHAFFSEYGKVTETLIMYDQEQRRSRGFGFISFESEEPVNQLTAQRYVDISGKQ 179
Query: 234 LNCRLADNKKAKP 246
+ C+ A+ K+++P
Sbjct: 180 VECKRAEPKESRP 192
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 23/174 (13%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLF+ GL W+TT + LR FSAYGE+E V D TG+S+G+ FI FK ID M
Sbjct: 42 RKLFVGGLSWETTDKELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 101
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKLLAHFA 185
A G T+ N V +P R KIFVG + +++S D++ F+
Sbjct: 102 A---------GDHTINNKKV---------DPKKAKARHGKIFVGGLSSEISDDEIKNFFS 143
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+G I E + FDK + KGF +++ + L P +T+ GK+++ + A
Sbjct: 144 NFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIAGKEVDVKRA 197
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 164 RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALV 223
RK+FVG + + + +L HF+ YGEIE + D TG+ +GFA V+K + +
Sbjct: 42 RKLFVGGLSWETTDKELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS-----I 96
Query: 224 DPIKTVDGKQLNCRLADNKKAK 245
D + +N + D KKAK
Sbjct: 97 DKVMAAGDHTINNKKVDPKKAK 118
>gi|449458854|ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
sativus]
Length = 462
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 14/193 (7%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLFI G+ W+T+ + L+ FS YGE+ VV+ DK T + +G+GF+ F
Sbjct: 2 DSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPN 173
KH IDG + K + + + T + + + + ++ +KIFVG +P
Sbjct: 62 RVLQDKHTIDGKTVEAKRALSREE-QQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ + +F YG + + + +D+ T +P+GF + T E L ++GKQ
Sbjct: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
Query: 234 LNCRLADNKKAKP 246
+ + A K A P
Sbjct: 181 VEVKRALPKDANP 193
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+D K+F+G + + S DKL +F+ YGE+ + DK T +P+GF V+
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAK 245
L D T+DGK + + A +++ +
Sbjct: 61 DRVLQDK-HTIDGKTVEAKRALSREEQ 86
>gi|440908270|gb|ELR58311.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI GL ++TT E LRS F +G L + VV+ D T +S+G+G +T+ ++ A+
Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGLVTYATVEEVDAAMNA 73
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
K+DGR AV S + P ++++KIFVG + D L +F YG+I
Sbjct: 74 RPHKVDGRAVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKI 130
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 131 EVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 183
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L TV G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L TV G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|296196619|ref|XP_002745917.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Callithrix jacchus]
Length = 341
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 21/179 (11%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLAL 129
+FI GL W+TT E L++ FS +GE+ E V+ D ATG+S+G+GF+TFK ++ M +
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVM--V 58
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
KE + +DG++ A+ + T KIFVG V + S D F +G
Sbjct: 59 KEHT--LDGKLIDPKRAIPRDEQERT--------AKIFVGGVSQEASQDDFANFFRRFGN 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK+TG+P+GF + + L P+ + GK + K+A+P G
Sbjct: 109 VLDATLMMDKETGRPRGFGFVTFDSEAAVDRTLESPL-AICGKNIEV-----KRAQPRG 161
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ + + + + F +G + +A +++DK TG+ +G+
Sbjct: 67 LIDPKRAIPRDEQERTAKIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKETGRPRGF 126
Query: 115 GFITF 119
GF+TF
Sbjct: 127 GFVTF 131
>gi|50294199|ref|XP_449511.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528825|emb|CAG62487.1| unnamed protein product [Candida glabrata]
Length = 513
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 37 LTSDQLLDVLSSAVARHDDVLESVRSIADADPTQR--KLFIRGLGWDTTTEGLRSIFSAY 94
++S+ + + + + + E+ R AD ++ K+FI GL W+TT +GLR FS Y
Sbjct: 94 VSSEPQVSNQTQNSEQRESIEEANRRQVKADLSRENCKMFIGGLNWETTEDGLREYFSKY 153
Query: 95 GELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNS 154
G + E ++ D TG+S+G+GF++F +K +DG+V A+ +
Sbjct: 154 GNVVELKIMKDPNTGRSRGFGFLSFDAPSSVDEVVK-TQHILDGKVIDPKRAIPREEQDK 212
Query: 155 TNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKT 214
T KIFVG + D+ + +F+ +G I + L DK TG+ +GF Y +
Sbjct: 213 TG--------KIFVGGLGTDVRPKEFEEYFSQWGTIIDAQLMLDKDTGRSRGFGFVTYDS 264
Query: 215 AEGAQAALVDPIKTVDGKQLNCRLAD 240
+ A+ + GKQ+ + A+
Sbjct: 265 PDAAEKVCESRYREFKGKQIEIKRAE 290
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 130
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
Query: 242 KKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 191 RDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L T+ G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 234
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|334349111|ref|XP_001368260.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Monodelphis domestica]
Length = 341
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF + A+
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
IDGRV AVA + P V+++K+FVG + D L +F YG+
Sbjct: 69 ARPHSIDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGK 125
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 126 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|149634029|ref|XP_001510026.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Ornithorhynchus anatinus]
gi|345323587|ref|XP_003430725.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 344
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF + A+
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
IDGRV AVA + P V+++K+FVG + D L +F YG+
Sbjct: 69 ARPHSIDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGK 125
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 126 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 130
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
Query: 242 KKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 191 RDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|345323589|ref|XP_003430726.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 302
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF + A+
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS 68
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
IDGRV AVA + P V+++K+FVG + D L +F YG+
Sbjct: 69 ARPHSIDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGK 125
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 126 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|71896753|ref|NP_001026156.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Gallus gallus]
gi|53127438|emb|CAG31102.1| hypothetical protein RCJMB04_2g17 [Gallus gallus]
Length = 349
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 76
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 77 ARPHT---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 130
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 131 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 183
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 86 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 145
Query: 109 GKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNN 157
GK +G+GF+TF D + + I+G A++ N
Sbjct: 146 GKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQN 194
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 113
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V + + P RKIF+G +P ++ D+L HF+ YG
Sbjct: 114 --EDDHVIDGRTVEVKRTVPREEMITKDGP---KTRKIFIGGLPPSLTEDELKDHFSSYG 168
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 169 NVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 224
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
+T D I + L D ++D + V R + I P RK+FI GL T
Sbjct: 101 VTFSDPSVIDKVLEDDHVIDGRTVEVKR---TVPREEMITKDGPKTRKIFIGGLPPSLTE 157
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
+ L+ FS+YG + E ++LD +TG+S+G+GFITF+ D + E
Sbjct: 158 DELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISE 204
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
SL KIFVG V + + + HF YG I + + DK T P+GF +
Sbjct: 53 SLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 112
Query: 222 LVDPIKTVDGKQLNCR 237
L D +DG+ + +
Sbjct: 113 LEDD-HVIDGRTVEVK 127
>gi|440899276|gb|ELR50605.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 339
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 7 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 66
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 67 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 120
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 121 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 173
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 76 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 135
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 136 GKKRGFGFVTFDDHD 150
>gi|4504447|ref|NP_002128.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Homo
sapiens]
gi|114051756|ref|NP_001039440.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|73976082|ref|XP_863847.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 3
[Canis lupus familiaris]
gi|332242620|ref|XP_003270483.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Nomascus leucogenys]
gi|332864909|ref|XP_003318407.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan troglodytes]
gi|338724111|ref|XP_003364873.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Equus caballus]
gi|350595419|ref|XP_003484106.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Sus scrofa]
gi|390466619|ref|XP_003733620.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Callithrix jacchus]
gi|397472888|ref|XP_003807964.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan paniscus]
gi|402863875|ref|XP_003896219.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Papio anubis]
gi|403287969|ref|XP_003935191.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410952506|ref|XP_003982920.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Felis catus]
gi|426355697|ref|XP_004045246.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Gorilla gorilla gorilla]
gi|122145945|sp|Q2HJ60.1|ROA2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337449|gb|AAA36574.1| hnRNP A2 protein [Homo sapiens]
gi|500638|gb|AAB60650.1| hnRNP protein A2 [Homo sapiens]
gi|565644|dbj|BAA06032.1| hnRNP A2 protein [Homo sapiens]
gi|87578315|gb|AAI13299.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Bos taurus]
gi|119614241|gb|EAW93835.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|119614242|gb|EAW93836.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|149033380|gb|EDL88181.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|149033381|gb|EDL88182.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|296488431|tpg|DAA30544.1| TPA: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|387542842|gb|AFJ72048.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Macaca
mulatta]
gi|410225452|gb|JAA09945.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343561|gb|JAA40594.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343565|gb|JAA40596.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343567|gb|JAA40597.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343569|gb|JAA40598.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|456753293|gb|JAA74140.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Sus scrofa]
Length = 341
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 62 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 121
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 122 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 172
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L TV G + ++A K+
Sbjct: 173 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 225
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 118 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 177
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 178 MDPKLNKRRGFVFITFKE--------EEPVKKV 202
>gi|109134362|ref|NP_058086.2| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1 [Mus
musculus]
gi|309267107|ref|XP_001473875.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Mus musculus]
gi|21071091|gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
gi|148666222|gb|EDK98638.1| mCG119114, isoform CRA_b [Mus musculus]
gi|148666223|gb|EDK98639.1| mCG119114, isoform CRA_b [Mus musculus]
Length = 341
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|32880197|ref|NP_872591.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2 [Mus
musculus]
gi|26354140|dbj|BAC40700.1| unnamed protein product [Mus musculus]
gi|223461557|gb|AAI41254.1| Hnrnpa2b1 protein [Mus musculus]
Length = 301
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 97/188 (51%), Gaps = 12/188 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F +GE++E +V+ D T +S+G+GF+T+ G L +
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQ 82
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + + +KIFVG + + + + + +F +G+++
Sbjct: 83 NRHELDSKTIDPKVAFPRRA----QPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVD 138
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MG 248
+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 139 DAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVMT 193
Query: 249 PDGGGPGN 256
P G G
Sbjct: 194 PTGSARGR 201
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 39/53 (73%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF++ D
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENED 163
>gi|403257202|ref|XP_003921219.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 299
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Query: 68 PTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
P Q RKLFI GL ++TT E LR+ F +G L + VV+ T +S+G+GFIT+ ++
Sbjct: 10 PEQLRKLFIGGLSFETTDESLRTHFEQWGTLTDCVVMKHPNTKRSRGFGFITYATVEEVD 69
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
AL K+DGRV AV +S ++++KI VG + D L +F
Sbjct: 70 AALNAKPHKVDGRVVEPKRAVL--REDSQRPGAHLTVKKISVGGIKEDTEEHHLRDYFEQ 127
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFNDHDSMDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|71894833|ref|NP_001026599.1| DAZ-associated protein 1 [Gallus gallus]
gi|53127644|emb|CAG31151.1| hypothetical protein RCJMB04_2n4 [Gallus gallus]
Length = 409
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 12 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 71
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G+ ++N KIFVG +P++
Sbjct: 72 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDN---NKSNKIFVGGIPHNCGET 128
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 129 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 188
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G ++P +A G G P
Sbjct: 189 AEPRDSKSQTP--GPPGASQW----GSRIMPSAANGWAGQP 223
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 130
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
Query: 242 KKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 191 RDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 222
>gi|194388148|dbj|BAG65458.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFATYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D ++ K +GF +K E + L T+ G + ++A K+
Sbjct: 182 AIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 234
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D + K +G+ FITFK +EP KK+
Sbjct: 187 MDPKSNKRRGFVFITFKE--------EEPVKKV 211
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKA-----PV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L TV G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKAPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + LR FS +GE+ E V+ D ATG+S+G+GF+TF+ + + +
Sbjct: 103 KMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIVMVK 162
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ T KIFVG V + + + F +G +
Sbjct: 163 -EHYLDGKIIDPKRAIPREEQEKT--------AKIFVGGVSQEATEQDFKSFFEQFGRVI 213
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + A L P+ + GK + K+A+P G
Sbjct: 214 DATLMMDKDTGRPRGFGFVTFDGEAAVDACLQGPLAIL-GKPIEV-----KRAQPRG 264
>gi|157059863|dbj|BAF79677.1| heterogeneous nuclear ribonucleoprotein B0a [Rattus norvegicus]
Length = 301
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + + T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKA 175
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|440632909|gb|ELR02828.1| hypothetical protein GMDG_05764 [Geomyces destructans 20631-21]
Length = 544
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 15/177 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W+TT + L+ FS +GE+ E V+ D A+G+S+G+GF+TFK + + +
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFKDARTVNVVMVK 162
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+ + T+ KIFVG V + S +F +G +
Sbjct: 163 -EHYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQEASELDFKEYFMQFGRVV 213
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+P+GF + + A + P++ + GK + KKA+P G
Sbjct: 214 DATLMMDKDTGRPRGFGFVTFDSEAAVDACINIPLEIL-GKPIEV-----KKAQPRG 264
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +DAR + + + LD +++ R+I D K+F+ G+ + +
Sbjct: 148 LTFKDARTVNVVMVKEHYLD---------GKIIDPKRAIPRDEQERTSKIFVGGVSQEAS 198
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+ F +G + +A +++DK TG+ +G+GF+TF
Sbjct: 199 ELDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTF 234
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT EGL S FS YGE+ + ++ D +TG+S+G+GF+TFK +K+
Sbjct: 164 KMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAVDEVIKK 223
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+A + KIFVG + ++ F+ +G I
Sbjct: 224 -DHILDGKLIDPKRAIAREEQDKVG--------KIFVGGIDPLVNERDFNDFFSQFGHII 274
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+ L DK TG+ +GF Y + E V+ T+ GK + + A+
Sbjct: 275 DAQLMIDKDTGRSRGFGFITYDSPEAVDRVCVNKYLTLKGKAMEVKRAE 323
>gi|410058693|ref|XP_003951016.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Pan
troglodytes]
gi|119614240|gb|EAW93834.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_a [Homo
sapiens]
Length = 301
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|343961425|dbj|BAK62302.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pan troglodytes]
Length = 301
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|431921599|gb|ELK18951.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Pteropus alecto]
Length = 298
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 7/172 (4%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 18 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 77
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 78 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 134
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
YG+IE + D+ +GK +GFA + + ++ TV+G NC
Sbjct: 135 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGH--NC 184
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 144 NLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGK 203
LA+ + +S P LRK+F+G + + + + L +HF +G + + + D T +
Sbjct: 5 KLAILLHMRSSPKEPE--QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKR 62
Query: 204 PKGFALFVYKTAEGAQAALVDPIKTVDGK 232
+GF Y T E AA+ VDG+
Sbjct: 63 SRGFGFVTYATVEEVDAAMNARPHKVDGR 91
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGR AV+ +S ++++KIFVG + D L
Sbjct: 68 DAAMCA--RPH-KVDGRAVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F YG+IE + D+Q+GK +GFA + + +V T++G + A +K
Sbjct: 123 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEVKKALSK 182
Query: 243 K 243
+
Sbjct: 183 Q 183
>gi|157059859|dbj|BAF79675.1| heterogeneous nuclear ribonucleoprotein A2 [Rattus norvegicus]
Length = 341
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + + T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKA 175
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
L SV + P+ K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF
Sbjct: 4 LTSVLTSVMFSPSS-KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 62
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDM 175
+TF L +P ++D + +A + P V+ +KIFVG + +
Sbjct: 63 VTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANT 117
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ + +F +G++E+ L FDK T + +GF ++ + +V+ + + ++N
Sbjct: 118 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEIN 172
Query: 236 CRLADNKKAKP 246
++ + KKA+P
Sbjct: 173 NKMVECKKAQP 183
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 9/175 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GEL+E VV+ D T +S+G+GF+TFK + L
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++++DG+ LAV + + + +KIF+G + + S + + +F+ +G+I
Sbjct: 61 GAQELDGKKIDPKLAVPKRAPAK----MVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKIT 116
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E L FDK T + +GF +++ A A ++ K++ KKA+P
Sbjct: 117 ETMLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEV-----KKAQP 166
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
R+ A T +K+FI GL +T+ E ++ FS +G++ E +++ DKAT + +G+GF+TF+
Sbjct: 79 RAPAKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRGFGFVTFE 138
Query: 121 HIDGA 125
+ A
Sbjct: 139 SENSA 143
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 16/194 (8%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP K+FI GL W TT EGL+ F +GE++E +V+ D T +S+G+GF+T+ G
Sbjct: 20 DPC--KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVE 77
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFA 185
L + ++D + +A + P V+ +KIFVG + + + + + +F
Sbjct: 78 KVLAQNRHELDSKTIDPKVAFPRRA-----QPKLVTRTKKIFVGGLSVNTTIEDVKHYFD 132
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+G++++ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+
Sbjct: 133 QFGKVDDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQ 187
Query: 246 P---MGPDGGGPGN 256
P M P G G
Sbjct: 188 PKEVMTPTGSARGR 201
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
L SV + P+ K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF
Sbjct: 4 LTSVLTSVMFSPSS-KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 62
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDM 175
+TF L +P ++D + +A + P V+ +KIFVG + +
Sbjct: 63 VTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANT 117
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ + +F +G++E+ L FDK T + +GF ++ + +V+ + + ++N
Sbjct: 118 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEIN 172
Query: 236 CRLADNKKAKP 246
++ + KKA+P
Sbjct: 173 NKMVECKKAQP 183
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L T+ G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 234
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 62 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 116
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 117 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 167
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +T E ++ F +G++E+A+++ DK T + +G+GF+TF++ D
Sbjct: 90 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 142
>gi|348570610|ref|XP_003471090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 356
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 5/190 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT + LR F +G L + VV+ T +S+G+GF+T+ ++
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDRVVMRVPQTKRSRGFGFVTYSCVEEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 125
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
YG+IE + D+Q+GK +GFA + + +V T++G NC + +
Sbjct: 126 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEVKKALSKQ 183
Query: 246 PMGPDGGGPG 255
M G G
Sbjct: 184 EMQSAGSQRG 193
>gi|224087811|ref|XP_002194831.1| PREDICTED: DAZ-associated protein 1 [Taeniopygia guttata]
Length = 410
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 12 EKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 71
Query: 131 EPSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSA 177
+DGR T G+ ++N KIFVG +P++
Sbjct: 72 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDN---NKSNKIFVGGIPHNCGE 128
Query: 178 DKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCR 237
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 129 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 188
Query: 238 LADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G ++P +A G G P
Sbjct: 189 RAEPRDSKSQTP--GPPGASQW----GSRIMPSAANGWAGQP 224
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 113
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V + + P RKIF+G +P ++ D+L HF+ YG
Sbjct: 114 --EDDHVIDGRTVEVKRTVPREEMITKDGP---KTRKIFIGGLPPSLTEDELKDHFSSYG 168
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 169 NVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 224
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
+T D I + L D ++D + V R + I P RK+FI GL T
Sbjct: 101 VTFSDPSVIDKVLEDDHVIDGRTVEVKR---TVPREEMITKDGPKTRKIFIGGLPPSLTE 157
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
+ L+ FS+YG + E ++LD +TG+S+G+GF+TF+ D + E
Sbjct: 158 DELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 204
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
SL KIFVG V + + + HF YG I + + DK T P+GF +
Sbjct: 53 SLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 112
Query: 222 LVDPIKTVDGKQLNCR 237
L D +DG+ + +
Sbjct: 113 LEDD-HVIDGRTVEVK 127
>gi|3329498|gb|AAC26867.1| heterogenous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 69 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 78 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 137
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 138 GKKRGFGFVTFDDHD 152
>gi|17554332|ref|NP_497799.1| Protein MSI-1 [Caenorhabditis elegans]
gi|10047307|dbj|BAB13470.1| neural RNA-binding protein MSI-1 [Caenorhabditis elegans]
gi|18376536|emb|CAA84667.2| Protein MSI-1 [Caenorhabditis elegans]
Length = 320
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 9/175 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT E LR F +GE+ E +V+ D AT +++G+GFITF L
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DG+ +A T + +K+F+G + + + + +F YG++E
Sbjct: 106 REHELDGKKIDPKVAFP----KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVE 161
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ L FDK T + +GF + + E A ++GK + C KKA+P
Sbjct: 162 DAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVEC-----KKAQP 211
>gi|351704285|gb|EHB07204.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial
[Heterocephalus glaber]
gi|355560744|gb|EHH17430.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
mulatta]
gi|355747762|gb|EHH52259.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
fascicularis]
Length = 352
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 20 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 79
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 80 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 133
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 134 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 186
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 89 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 148
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 149 GKKRGFGFVTFDDHD 163
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 38 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 95
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR V + + P RKIF+G +P ++ D+L HF+ YG
Sbjct: 96 --EDDHVIDGRTVEVKRTVPREEMITKDGP---KTRKIFIGGLPPSLTEDELKDHFSSYG 150
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+ E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 151 NVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 206
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTT 84
+T D I + L D ++D + V R + I P RK+FI GL T
Sbjct: 83 VTFSDPSVIDKVLEDDHVIDGRTVEVKR---TVPREEMITKDGPKTRKIFIGGLPPSLTE 139
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
+ L+ FS+YG + E ++LD +TG+S+G+GFITF+ D + E
Sbjct: 140 DELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISE 186
>gi|410915344|ref|XP_003971147.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Takifugu rubripes]
Length = 407
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
S+ D+ K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF
Sbjct: 12 SLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTD 71
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKL 180
L + ++D + +A + P V+ +KIFVG + + + +
Sbjct: 72 AASVDKVLAQQHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDV 126
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G++++ L FDK T + +GF ++ + +V+ + + ++N ++ +
Sbjct: 127 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENED-----IVEKVCEIHFHEINNKMVE 181
Query: 241 NKKAKP 246
KKA+P
Sbjct: 182 CKKAQP 187
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKA-----PV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L TV G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKAPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|327274637|ref|XP_003222083.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Anolis carolinensis]
Length = 349
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDSAMA 76
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F+
Sbjct: 77 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFSE 130
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 131 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 183
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR FS YG+++ +I D+ +
Sbjct: 86 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFSEYGKIDTIEIITDRQS 145
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 146 GKKRGFGFVTFDDHD 160
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 97/188 (51%), Gaps = 12/188 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGL+ F +GE++E +V+ D T +S+G+GF+T+ G L +
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQ 82
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + + +KIFVG + + + + + +F +G+++
Sbjct: 83 NRHELDSKTIDPKVAFPRRA----QPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVD 138
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MG 248
+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P M
Sbjct: 139 DAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQPKEVMT 193
Query: 249 PDGGGPGN 256
P G G
Sbjct: 194 PTGSARGR 201
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 39/53 (73%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF++ D
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENED 163
>gi|410915342|ref|XP_003971146.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Takifugu rubripes]
Length = 388
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
S+ D+ K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF
Sbjct: 12 SLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTD 71
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKL 180
L + ++D + +A + P V+ +KIFVG + + + +
Sbjct: 72 AASVDKVLAQQHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDV 126
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G++++ L FDK T + +GF ++ + +V+ + + ++N ++ +
Sbjct: 127 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENED-----IVEKVCEIHFHEINNKMVE 181
Query: 241 NKKAKP 246
KKA+P
Sbjct: 182 CKKAQP 187
>gi|344301066|gb|EGW31378.1| hypothetical protein SPAPADRAFT_154438 [Spathaspora passalidarum
NRRL Y-27907]
Length = 507
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDTT EGLR FS YG + + ++ D ATG+S+G+GF+TF+ +K
Sbjct: 173 KMFVGGLNWDTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKSVDEVIK- 231
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+A + KIFVG + ++ + FA YG I
Sbjct: 232 VDHILDGKLIDPKRAIAREEQDRVG--------KIFVGGIDPLVTEKEFYDFFAQYGSII 283
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ L DK TG+ +GF Y + + V+ ++ G+ + K+A+P G
Sbjct: 284 DAQLMVDKDTGRSRGFGFITYDSPDAVDRVTVNKYLSLKGRAMEV-----KRAEPRG 335
>gi|268564135|ref|XP_002647098.1| C. briggsae CBR-MSI-1 protein [Caenorhabditis briggsae]
Length = 318
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
Query: 58 ESVRSIADADPTQR------KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKS 111
E R AD+D K+FI GL W TT E LR F +GE+ E +V+ D AT ++
Sbjct: 23 EEARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRA 82
Query: 112 KGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
+G+GFITF L ++DG+ +A T + +K+F+G +
Sbjct: 83 RGFGFITFVEPSSVDKVLNARDHELDGKKIDPKVAFP----KRTQAKLVTKTKKVFIGGL 138
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
+ + + +F YG++E+ L +DK T + +GF + + E A ++G
Sbjct: 139 SATSTLEDMKQYFESYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEING 198
Query: 232 KQLNCRLADNKKA 244
K + C+ A K+
Sbjct: 199 KMVECKKAQPKEV 211
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGDFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L T+ G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 234
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|30696616|ref|NP_851195.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334188426|ref|NP_001190546.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009262|gb|AED96645.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009265|gb|AED96648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 448
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 30/238 (12%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT E LR FS YG++ EAV++ D+ATG+++G+GFI F
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLA-------VAGNSGNSTNNPVDVSLRKIFVGNV 171
KH IDG + K+ + D +V + + V G G + +KIFVG +
Sbjct: 67 KHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRT---------KKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P+ ++ ++ +F +G I + + +D T +P+GF + + + L ++G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 232 KQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGP 289
K + + A K+ P+ + P +N+G G +P ++ + PG Y GP
Sbjct: 178 KLVEVKRAVPKEISPVS-NIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGP 234
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T E ++ F +G + + VV+ D T + +G+GFITF D L
Sbjct: 110 KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH 169
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 170 KTFHELNGKLVEVKRAV 186
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F+ YG++ E + D+ TG+ +GF V+ +
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ ++D +DG+ + + A
Sbjct: 61 ERVIMDK-HIIDGRTVEAKKA 80
>gi|22531168|gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 448
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 30/238 (12%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT E LR FS YG++ EAV++ D+ATG+++G+GFI F
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLA-------VAGNSGNSTNNPVDVSLRKIFVGNV 171
KH IDG + K+ + D +V + + V G G + +KIFVG +
Sbjct: 67 KHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRT---------KKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P+ ++ ++ +F +G I + + +D T +P+GF + + + L ++G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 232 KQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGP 289
K + + A K+ P+ + P +N+G G +P ++ + PG Y GP
Sbjct: 178 KLVEVKRAVPKEISPVS-NIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGP 234
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T E ++ F +G + + VV+ D T + +G+GFITF D L
Sbjct: 110 KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH 169
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 170 KTFHELNGKLVEVKRAV 186
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F+ YG++ E + D+ TG+ +GF V+ +
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ ++D +DG+ + + A
Sbjct: 61 ERVIMDK-HIIDGRTVEAKKA 80
>gi|157265559|ref|NP_001098083.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Rattus norvegicus]
gi|224493240|sp|A7VJC2.1|ROA2_RAT RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|157059861|dbj|BAF79676.1| heterogeneous nuclear ribonucleoprotein B1 [Rattus norvegicus]
Length = 353
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 81 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + + T++G R A
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKA 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 90 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 149
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 150 GKKRGFGFVTFDDHD 164
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 136 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 186
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K + + L TV G + ++A K+
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 39 SDQLLDVLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGEL 97
S + VL R D V++ +++A +K+F+ GL + T E +R F +GE+
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEI 185
Query: 98 EEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
E + +D K +G+ FITFK D L++ + G +A
Sbjct: 186 EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
>gi|158259881|dbj|BAF82118.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 81 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 90 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 149
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 150 GKKRGFGFVTFDDHD 164
>gi|14043072|ref|NP_112533.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Homo
sapiens]
gi|388452958|ref|NP_001252700.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Macaca mulatta]
gi|73976084|ref|XP_532495.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Canis lupus familiaris]
gi|194209740|ref|XP_001498416.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Equus caballus]
gi|296209404|ref|XP_002751505.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Callithrix jacchus]
gi|301754131|ref|XP_002912905.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ailuropoda melanoleuca]
gi|332242622|ref|XP_003270484.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Nomascus leucogenys]
gi|332864911|ref|XP_519003.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan troglodytes]
gi|335305558|ref|XP_003134901.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Sus scrofa]
gi|395830927|ref|XP_003788564.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Otolemur
garnettii]
gi|397472890|ref|XP_003807965.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan paniscus]
gi|402863877|ref|XP_003896220.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Papio anubis]
gi|403287971|ref|XP_003935192.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410952508|ref|XP_003982921.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Felis catus]
gi|426227786|ref|XP_004007996.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Ovis
aries]
gi|426355699|ref|XP_004045247.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Gorilla gorilla gorilla]
gi|133257|sp|P22626.2|ROA2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337453|gb|AAA60271.1| hnRNP B1 protein [Homo sapiens]
gi|565643|dbj|BAA06031.1| hnRNP B1 protein [Homo sapiens]
gi|119614243|gb|EAW93837.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|119614245|gb|EAW93839.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|387542844|gb|AFJ72049.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Macaca
mulatta]
gi|410225454|gb|JAA09946.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343563|gb|JAA40595.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
Length = 353
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 81 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 90 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 149
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 150 GKKRGFGFVTFDDHD 164
>gi|124028629|sp|O88569.2|ROA2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|23266713|gb|AAN16352.1|AF452567_1 heterogeneous nuclear ribonucleoprotein A2/B1/B0 [Mus musculus]
Length = 353
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 81 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 90 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 149
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 150 GKKRGFGFVTFDDHD 164
>gi|24650831|ref|NP_733249.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
gi|157652|gb|AAA28622.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172509|gb|AAF56800.2| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
Length = 364
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 30 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 89
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 90 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSIRDYFQHFGNI 147
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P D
Sbjct: 148 VDINIVIDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALPKQND 202
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 119 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 178
Query: 129 LKEPSKKIDGRVTVTNLAV 147
+ + +++G++ A+
Sbjct: 179 VLQKQHQLNGKMVDVKKAL 197
>gi|354472764|ref|XP_003498607.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cricetulus griseus]
Length = 357
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 25 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 84
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 85 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 138
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 139 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 191
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 94 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 153
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 154 GKKRGFGFVTFDDHD 168
>gi|410036043|ref|XP_003949991.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan troglodytes]
Length = 320
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI GL ++TT E LRS F G L + VV+ D T S G+GF+T+
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKCSTGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
+ A+ K+DGRV AV S + P ++++K FVG + D
Sbjct: 63 ATVKEVEAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKTFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG+ E + D+ +GK +GFA + + ++ TV+G R
Sbjct: 120 HLRDYFEQYGKTEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|291387921|ref|XP_002710458.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Oryctolagus
cuniculus]
Length = 306
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 13/193 (6%)
Query: 52 RHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKS 111
R D ES + DA K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S
Sbjct: 29 RSDLQWESAENEEDAG----KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRS 84
Query: 112 KGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
+G+GFI FK L + ++DGRV A+A +PV +KIFVG +
Sbjct: 85 RGFGFILFKDATSVEKVLDQKEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGL 135
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
+ + +K+ +F +GEIE L D ++ K +GF +K + + L T+ G
Sbjct: 136 NPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEDPVKKVLEKKFHTISG 195
Query: 232 KQLNCRLADNKKA 244
+ ++A K+
Sbjct: 196 SKCEIKVAQPKEV 208
>gi|269063722|emb|CAS85146.1| squid, variant G [Blattella germanica]
Length = 274
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W+TT + LR F YGE+E V D TG+S+G+ FI F D
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS------ 112
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKLLAHFACYG 188
ID ++ + + N +P R KIFVG + D+S D + + FA YG
Sbjct: 113 -----IDKVLSAGDHVI----NNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYG 163
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I E + FDK + KGF +++ + Q L P ++++GK+++ + A
Sbjct: 164 TIVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 61 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 115
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 116 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 166
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +T E ++ F +G++E+A+++ DK T + +G+GF+TF++ D
Sbjct: 89 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 141
>gi|157059865|dbj|BAF79678.1| heterogeneous nuclear ribonucleoprotein B0b [Rattus norvegicus]
Length = 313
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 81 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + + T++G R A
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKA 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 90 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 149
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 150 GKKRGFGFVTFDDHD 164
>gi|24650833|ref|NP_733250.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|157653|gb|AAA28623.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172510|gb|AAN14141.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|259089588|gb|ACV91650.1| RE34829p [Drosophila melanogaster]
Length = 360
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 26 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 85
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 86 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSIRDYFQHFGNI 143
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P D
Sbjct: 144 VDINIVIDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALPKQND 198
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 115 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 174
Query: 129 LKEPSKKIDGRVT 141
+ + +++G++
Sbjct: 175 VLQKQHQLNGKMV 187
>gi|291394569|ref|XP_002713772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
gi|291397610|ref|XP_002715276.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
Length = 352
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 81 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 90 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 149
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 150 GKKRGFGFVTFDDHD 164
>gi|269063720|emb|CAS85145.1| squid, variant F [Blattella germanica]
Length = 297
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W+TT + LR F YGE+E V D TG+S+G+ FI F D
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS------ 112
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKLLAHFACYG 188
ID ++ + + N +P R KIFVG + D+S D + + FA YG
Sbjct: 113 -----IDKVLSAGDHVI----NNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYG 163
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I E + FDK + KGF +++ + Q L P ++++GK+++ + A
Sbjct: 164 TIVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
>gi|269063718|emb|CAS85144.1| squid, variant E [Blattella germanica]
Length = 321
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ GL W+TT + LR F YGE+E V D TG+S+G+ FI F D
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS------ 112
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKLLAHFACYG 188
ID ++ + + N +P R KIFVG + D+S D + + FA YG
Sbjct: 113 -----IDKVLSAGDHVI----NNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYG 163
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I E + FDK + KGF +++ + Q L P ++++GK+++ + A
Sbjct: 164 TIVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
>gi|89257506|gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 144/333 (43%), Gaps = 62/333 (18%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH--IDGAMLAL 129
KLFI G+ W+TT + LR F ++GE+ EAV++ D+ATG+++G+GF+ F + ++ L
Sbjct: 7 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFSDPIVAERVVFL 66
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSL---------RKIFVGNVPNDMSADKL 180
+ IDG++ AV + N + SL +KIFVG + + ++ +
Sbjct: 67 RHV---IDGKLVEAKKAVPRDDHVVLNKSYNTSLQGSPGPANSKKIFVGGLASSVTEAEF 123
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+FA +G I + + +D +T +P+GF +++ + L ++GK + +LA
Sbjct: 124 KKYFAQFGVITDVVVMYDHRTQRPRGFGFISFESEDAVDKVLQRTFHELNGKMVEVKLAV 183
Query: 241 NKKA------KPMGPDGGGPGNVS---MNHG---------DGMGMVP-----PSAGGSYG 277
K+ M + G +S MN G G+ P P G G
Sbjct: 184 PKEMALNPIRNQMNVNSFGSSRISALLMNEYTQGFSPSPISGYGVKPEVRYSPGLGNRGG 243
Query: 278 G--PGGHGYPFSGPPPLGHHLNSSLGGPGQVPSSMGGVGAGGYGAGLGGPYGGYGGPGST 335
G P GHGY G LN P G+G AG G P P
Sbjct: 244 GFSPFGHGY--------GIELNFE-------PDQSQNFGSGS-SAGFGRPLSPGYAPSLG 287
Query: 336 GYGGL---GGAGGG----AGAGGALGGAAGGLG 361
YG GGAG G A L G GGLG
Sbjct: 288 RYGSQIESGGAGNGPVLNAATKNHLWGNGGGLG 320
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHDDVL--ESVRSIADADP---TQRKLFIRGLGWDTTTE 85
R + R D L AV R D V+ +S + P +K+F+ GL T
Sbjct: 62 RVVFLRHVIDGKLVEAKKAVPRDDHVVLNKSYNTSLQGSPGPANSKKIFVGGLASSVTEA 121
Query: 86 GLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNL 145
+ F+ +G + + VV+ D T + +G+GFI+F+ D L+ +++G++ L
Sbjct: 122 EFKKYFAQFGVITDVVVMYDHRTQRPRGFGFISFESEDAVDKVLQRTFHELNGKMVEVKL 181
Query: 146 AV 147
AV
Sbjct: 182 AV 183
>gi|209155336|gb|ACI33900.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 348
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D+ TG+S+G+GFI FK G L++
Sbjct: 85 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAAGVDKVLEQ 144
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR A+A PV +KIFVG + D + + +F +GEIE
Sbjct: 145 KEHRLDGRQIDPKKAMA-----MKKEPV----KKIFVGGLNPDTEKEVIQEYFGTFGEIE 195
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF YK + L V G + ++A K+
Sbjct: 196 TIELPQDPKTEKRRGFVFITYKDETPVKKVLEKKFHNVSGSKCEIKIAQPKEV 248
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 165 KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD 224
K+FVG + D S L +F+ +GE+ + + D+QTG+ +GF ++K A G L
Sbjct: 85 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAAGVDKVLEQ 144
Query: 225 PIKTVDGKQLNCRLADNKKAKPM 247
+DG+Q++ + A K +P+
Sbjct: 145 KEHRLDGRQIDPKKAMAMKKEPV 167
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 45 VLSSAVARHDDVLESVRSIAD---ADPTQ---------RKLFIRGLGWDTTTEGLRSIFS 92
+L A D VLE D DP + +K+F+ GL DT E ++ F
Sbjct: 130 ILFKEAAGVDKVLEQKEHRLDGRQIDPKKAMAMKKEPVKKIFVGGLNPDTEKEVIQEYFG 189
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFK 120
+GE+E + D T K +G+ FIT+K
Sbjct: 190 TFGEIETIELPQDPKTEKRRGFVFITYK 217
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD---------VSLRKIFVGNVPNDMSADKLLA 182
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELRE 130
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+ +
Sbjct: 131 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 190
Query: 243 KAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+K P G PG G + P +A G G P
Sbjct: 191 DSKNQAP--GQPGASQW----GSRVAPSAANGWAGQP 221
>gi|335302749|ref|XP_003133427.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 447
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 115 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 174
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A P IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 175 A--RPH-SIDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 228
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+++ + D+Q+GK +GF F + + ++ T++G R A
Sbjct: 229 YGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKIVLQKYHTINGHNAEVRKA 281
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 184 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKVDTIEIITDRQS 243
Query: 109 GKSKGYGFITF 119
GK +G+GF TF
Sbjct: 244 GKKRGFGFFTF 254
>gi|414590674|tpg|DAA41245.1| TPA: hypothetical protein ZEAMMB73_495774 [Zea mays]
Length = 470
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 20/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T + LR F +G++ EAV++ D+ TG+++G+GF+ F
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGDVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTME 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D ++A + +S +P RKIFVG + ++++
Sbjct: 67 KHMIDGRMVEAKKAVPRDD-------QSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEV 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+ +F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 120 EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR 179
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 180 AVPKEQSP 187
>gi|402860565|ref|XP_003894696.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 321
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RK+FI GL ++TT E LRS F G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKIFIGGLSFETTDESLRSHFEQRGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A+ +K+DGR AV+ +S + ++++K FVG + D L +F
Sbjct: 69 DAAMNARPRKVDGRTVKPKRAVSRE--DSQRSGAHLTVKKKFVGGIKEDTEEHHLRDYFE 126
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK + FA + + ++ TV+G R A +K+
Sbjct: 127 QYGKIEVIEIMTDRGSGKKRDFAFITFDNHDSVDKTVIQKYHTVNGHNYEARKALSKQ 184
>gi|119923161|ref|XP_001251082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2
isoform 2 [Bos taurus]
gi|297471765|ref|XP_002685448.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2 [Bos
taurus]
gi|296490543|tpg|DAA32656.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI GL ++T E LRS F +G L + VV+ D T +S+G+GF+T+ ++ A+
Sbjct: 15 KLFIGGLRFETIDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAAMNA 74
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
K+DGR AV S + P ++++KIFVG + D L +F YG+I
Sbjct: 75 RPHKVDGRAVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
E + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 132 EVIEIMTDQGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCQVRKALSKQ 184
>gi|255574661|ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532357|gb|EEF34155.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT + LR F +GE+ EAV++ D+ATG+++G+GF+ F A + E
Sbjct: 7 KLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD---------VSLRKIFVGNVPNDMSADKLLA 182
IDGR AV N N +KIFVG + + ++
Sbjct: 67 -KHLIDGRNVEAKKAVPREDQNILNRNSSSSIHGSPSPARTKKIFVGGLASTVTESDFKK 125
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G I + + +D T +P+GF Y + E L ++GK + + A K
Sbjct: 126 YFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKMVEVKRAVPK 185
Query: 243 KAKPMGPDGGGPGNVSMN 260
+ P GP +N
Sbjct: 186 ELSP------GPTRTQLN 197
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+++ L K+F+G + D + D+L +F +GE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MEMELGKLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ +++ +DG+ + + A
Sbjct: 61 ERVVMEK-HLIDGRNVEAKKA 80
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F +G + + VV+ D T + +G+GFIT+ + L
Sbjct: 107 KKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLH 166
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 167 KTFHELNGKMVEVKRAV 183
>gi|355765936|gb|EHH62474.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Macaca
fascicularis]
Length = 302
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 37 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 96
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 97 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 148
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 149 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 208
>gi|344270293|ref|XP_003406980.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Loxodonta africana]
Length = 365
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 33 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 92
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 93 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 146
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 147 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 199
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 102 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 161
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 162 GKKRGFGFVTFDDHD 176
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD---------VSLRKIFVGNVPNDMSADKLLA 182
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELRE 130
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+ +
Sbjct: 131 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 190
Query: 243 KAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+K P G PG G + P +A G G P
Sbjct: 191 DSKNQAP--GQPGASQW----GSRVAPSAANGWAGQP 221
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 3 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 62
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD---------VSLRKIFVGNVPNDMSADKLLA 182
+DGR P + KIFVG +P++ +L
Sbjct: 63 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELRE 122
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+ +
Sbjct: 123 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 182
Query: 243 KAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+K P G PG G + P +A G G P
Sbjct: 183 DSKNQAP--GQPGASQW----GSRVAPSAANGWAGQP 213
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 98 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQ 157
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + DK+ +F +GEIE
Sbjct: 158 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEDKIREYFGDFGEIE 208
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K + + L V G + ++A K+
Sbjct: 209 SIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVGGSKCEIKVAQPKEV 261
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T + +R F +GE+E +
Sbjct: 154 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEDKIREYFGDFGEIESIELP 213
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D T K +G+ FITFK D P KKI
Sbjct: 214 MDPKTNKRRGFVFITFKEED--------PVKKI 238
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD---------VSLRKIFVGNVPNDMSADKLLA 182
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELRE 130
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+ +
Sbjct: 131 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 190
Query: 243 KAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+K P G PG G + P +A G G P
Sbjct: 191 DSKNQAP--GQPGASQW----GSRVAPSAANGWAGQP 221
>gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 30/238 (12%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT E LR FS YG++ EAV++ D+ATG+++G+GFI F
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLA-------VAGNSGNSTNNPVDVSLRKIFVGNV 171
KH IDG + K+ + D +V + + V G G + +KIFVG +
Sbjct: 67 KHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRT---------KKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P+ ++ ++ +F +G I + + +D T +P+GF + + + L ++G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 232 KQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGP 289
K + + A K+ P+ + P +N+G G +P ++ + PG Y GP
Sbjct: 178 KLVEVKRAVPKEISPVS-NIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGP 234
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T E ++ F +G + + VV+ D T + +G+GFITF D L
Sbjct: 110 KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH 169
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 170 KTFHELNGKLVEVKRAV 186
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F+ YG++ E + D+ TG+ +GF V+ +
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ ++D +DG R + KKA P
Sbjct: 61 ERVIMDK-HIIDG-----RTVEAKKAVP 82
>gi|18423760|ref|NP_568826.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42573682|ref|NP_974937.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15292725|gb|AAK92731.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20465895|gb|AAM20100.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332009263|gb|AED96646.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009264|gb|AED96647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 460
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 30/238 (12%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT E LR FS YG++ EAV++ D+ATG+++G+GFI F
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLA-------VAGNSGNSTNNPVDVSLRKIFVGNV 171
KH IDG + K+ + D +V + + V G G + +KIFVG +
Sbjct: 67 KHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRT---------KKIFVGGL 117
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
P+ ++ ++ +F +G I + + +D T +P+GF + + + L ++G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 232 KQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGP 289
K + + A K+ P+ + P +N+G G +P ++ + PG Y GP
Sbjct: 178 KLVEVKRAVPKEISPVS-NIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGP 234
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T E ++ F +G + + VV+ D T + +G+GFITF D L
Sbjct: 110 KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH 169
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 170 KTFHELNGKLVEVKRAV 186
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D ++L +F+ YG++ E + D+ TG+ +GF V+ +
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 219 QAALVDPIKTVDGKQLNCRLA 239
+ ++D +DG+ + + A
Sbjct: 61 ERVIMDK-HIIDGRTVEAKKA 80
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+FI GL W+TT + L+ FS +GE++E V+ D ATG+S+G+GF+TFK ++ M+
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+DG++ A+ + T+ KIFVG V + + F +G
Sbjct: 215 ----EHYLDGKIIDPKRAIPRDEQERTS--------KIFVGGVSQEATEQDFKQFFMQFG 262
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK +G+P+GF + + +A L P++ + GK + KKA+P G
Sbjct: 263 RVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL-GKPIEV-----KKAQPRG 316
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ + T + + F +G + +A +++DK +G+ +G+
Sbjct: 222 IIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGF 281
Query: 115 GFITF 119
GF+TF
Sbjct: 282 GFVTF 286
>gi|410292486|gb|JAA24843.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 355
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|326921905|ref|XP_003207194.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Meleagris gallopavo]
Length = 362
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 30 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 89
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 90 ARPHT---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 143
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 144 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 196
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 99 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 158
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 159 GKKRGFGFVTFDDHD 173
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 136 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 186
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K + + L TV G + ++A K+
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 39 SDQLLDVLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGEL 97
S + VL R D V++ +++A +K+F+ GL + T E +R F +GE+
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEI 185
Query: 98 EEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
E + +D K +G+ FITFK D L++ + G +A
Sbjct: 186 EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
>gi|1711240|dbj|BAA13161.1| TIS [Mus musculus]
gi|119617170|gb|EAW96764.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_d [Homo
sapiens]
Length = 268
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|395542043|ref|XP_003772944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Sarcophilus
harrisii]
Length = 306
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 41 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 100
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 101 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 152
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 153 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 212
>gi|242096402|ref|XP_002438691.1| hypothetical protein SORBIDRAFT_10g024450 [Sorghum bicolor]
gi|241916914|gb|EER90058.1| hypothetical protein SORBIDRAFT_10g024450 [Sorghum bicolor]
Length = 286
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F YG++ EAVVI D+ATG+SKGYGF+TF+ + A
Sbjct: 36 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFREPESAR 95
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIF 167
+A +P IDGR NLA+ G G + P +R +
Sbjct: 96 MACMDPYPVIDGRRANCNLAILGRPGPAV--PFVAPIRPVI 134
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YG+I E + D+ TG+ KG+ ++ E A+
Sbjct: 36 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFREPESAR 95
Query: 220 AALVDPIKTVDGKQLNCRLA 239
A +DP +DG++ NC LA
Sbjct: 96 MACMDPYPVIDGRRANCNLA 115
>gi|47221330|emb|CAF97248.1| unnamed protein product [Tetraodon nigroviridis]
Length = 312
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +G++ + + D +G+S+G+GF+ FK L++
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFTKFGDVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEKVLQQ 116
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR+ A+A PV +KIFVG + + + + + +F +GEIE
Sbjct: 117 KEHRLDGRLIDPKRAMA-----MKKEPV----KKIFVGGLNPEATEETIREYFGAFGEIE 167
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D ++ K +GF YK A+ L TV+G + +LA K+
Sbjct: 168 NIDLPLDPKSKKRRGFIFITYKEEASAKKCLEKKFHTVEGSRCELKLAQPKEV 220
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D +++ R++A +K+F+ GL + T E +R F A+GE+E +
Sbjct: 113 VLQQKEHRLDGRLIDPKRAMAMKKEPVKKIFVGGLNPEATEETIREYFGAFGEIENIDLP 172
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
LD + K +G+ FIT+K A L++ ++G LA
Sbjct: 173 LDPKSKKRRGFIFITYKEEASAKKCLEKKFHTVEGSRCELKLA 215
>gi|297737532|emb|CBI26733.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 115/258 (44%), Gaps = 33/258 (12%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT + L+ F YGE+ EAV++ D+ TG+++G+GF+ F A + +
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 132 PSKKIDGRVTVTNLAV--------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
IDGR AV N+G+ +P +KIFVG + + ++ +
Sbjct: 67 -KHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKY 125
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF Y + E + L ++GK + + A K+
Sbjct: 126 FDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKE 185
Query: 244 AKPMGPDG----------GGPGNVSMNHGDGMGMVPPSAGGSYG----------GPGGHG 283
P GP G N N+G G M S+ GSYG G G
Sbjct: 186 HSP-GPSRSPLVGYNYGLGRNNNFLNNYGQGYNM---SSVGSYGIRMDGRFNPVASGRSG 241
Query: 284 YPFSGPPPLGHHLNSSLG 301
+P G P G +N G
Sbjct: 242 FPPFGAPGYGMGMNLEQG 259
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
++ L K+F+G + D D+L +F YGE+ E + D+ TG+ +GF V+ A
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ ++D +DG R + KKA P
Sbjct: 61 ERVVMDK-HMIDG-----RTVEAKKAVP 82
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + F +G + + VV+ D T + +G+GFIT+ + L
Sbjct: 106 KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLH 165
Query: 131 EPSKKIDGRVTVTNLAV 147
+ +++G++ AV
Sbjct: 166 KTFHELNGKMVEVKRAV 182
>gi|359073189|ref|XP_003587038.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALK-EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
+A+ P K G + L A + +S ++++KIFVG + D L +F
Sbjct: 69 DVAMNARPHK---GTEELWELKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|296192610|ref|XP_002744138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 335
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF GL ++TT E LRS F +G L++ VV+ + T +S+G+GF+T+ ++ A+
Sbjct: 29 RKLFTGGLSFETTDESLRSHFEQWGTLKDGVVMRNPNTKRSRGFGFVTYATVEEVDAAIN 88
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K+DGRV AV S + P ++++KIFVG + D L +F YG+
Sbjct: 89 ARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGK 145
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
IE + D+ +GK +GFA + + ++ TV+G R A
Sbjct: 146 IEVIEIMMDRGSGKKRGFAFAISANHDSMDKIVIQKYHTVNGHNCEVRKA 195
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT LR F YG++E +++D+ +
Sbjct: 98 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMMDRGS 157
Query: 109 GKSKGYGF 116
GK +G+ F
Sbjct: 158 GKKRGFAF 165
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
LRK+F G + + + + L +HF +G +++G + + T + +GF Y T E AA+
Sbjct: 28 LRKLFTGGLSFETTDESLRSHFEQWGTLKDGVVMRNPNTKRSRGFGFVTYATVEEVDAAI 87
Query: 223 VDPIKTVDGK 232
VDG+
Sbjct: 88 NARPHKVDGR 97
>gi|414887335|tpg|DAA63349.1| TPA: hypothetical protein ZEAMMB73_769138 [Zea mays]
Length = 342
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLF+ G+ W+T + LR+ F +GE+ EAV++ D+ TG+++G+GF+ F
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Query: 120 KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
KH IDG M+ K+ + D ++A + +S +P RKIFVG + ++++
Sbjct: 67 KHMIDGRMVEAKKAVPRDD-------QSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEV 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+ +F +G I + + +D T +P+GF Y + + AL ++GK + +
Sbjct: 120 EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR 179
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 180 AVPKEQSP 187
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 33 IVERLTSDQ-LLD----VLSSAVARHDDVLESVRSIADADP---TQRKLFIRGLGWDTTT 84
I ER+T D+ ++D AV R D + S + + P RK+F+ GL + T
Sbjct: 59 IAERVTLDKHMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTE 118
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTN 144
R F +G + + VV+ D T + +G+GFIT+ D AL + +++G++
Sbjct: 119 VEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVK 178
Query: 145 LAV 147
AV
Sbjct: 179 RAV 181
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 16/188 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ W+TT E LR F YG L +A ++ DK +G+ +G+GF+TF + + + E
Sbjct: 103 KLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADV-AVLDRVLE 161
Query: 132 PSKKIDGRVTVTNLAV--------------AGNSGNSTNNPVDVSLRKIFVGNVPNDMSA 177
S IDGR A+ +G G + V +K+FVG +P ++
Sbjct: 162 ESHTIDGRTVEVKRAIPRDKTASGPSDVRSSGAHGRGNSGGVITESKKVFVGGLPPSVTE 221
Query: 178 DKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCR 237
+F +G I + + FD++T + +GF FV EGA A ++ + GK + +
Sbjct: 222 QDFRRYFEEFGRITDAVVMFDRETQRSRGFG-FVTFEEEGAVAEVISKTHELHGKVVEIK 280
Query: 238 LADNKKAK 245
A+ K+A+
Sbjct: 281 RAEPKEAR 288
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T + R F +G + +AVV+ D+ T +S+G+GF+TF+ +GA+ +
Sbjct: 208 KKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEE-EGAVAEVI 266
Query: 131 EPSKKIDGRVTVTNLA 146
+ ++ G+V A
Sbjct: 267 SKTHELHGKVVEIKRA 282
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNV-PNDMSADKLLAHFACYGEI 190
++DGRV A+A +PV +KIFVG + P + +K+ +F +GEI
Sbjct: 129 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPESPTEEKIREYFGEFGEI 179
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
E L D + K +GF +K E + L TV G + ++A K+
Sbjct: 180 EAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 233
>gi|355558052|gb|EHH14832.1| hypothetical protein EGK_00819, partial [Macaca mulatta]
Length = 278
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
+RKLFI GL ++TT E LRS +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 13 RRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVTYATVQEVDAVM 72
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
K+DGR T AV SG + P ++++K+FVG + D L+ +F +G
Sbjct: 73 NARPHKVDGRAVETKRAV---SGEDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFG 129
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
++E + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 130 KMEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 57 LESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATG 109
+E+ R+++ D T +K+F+ G+ DT L F +G++E ++ D+ +G
Sbjct: 84 VETKRAVSGEDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSG 143
Query: 110 KSKGYGFITFKHIDGA 125
K +G+ F+TF D
Sbjct: 144 KKRGFAFVTFDDHDSV 159
>gi|448522704|ref|XP_003868757.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis Co 90-125]
gi|380353097|emb|CCG25853.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis]
Length = 488
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT EGL + FS +GE+ + ++ D ATG+S+G+GF+TFK + +K+
Sbjct: 172 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ 231
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A++ + + KIF+G + +S ++ F+ +G I
Sbjct: 232 -DHILDGKLIDPKRAISREDQD--------RVGKIFIGGIDPMVSENEFNDFFSKFGTII 282
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ L DK TG+ +GF + + + V+ T+ GK + + A
Sbjct: 283 DCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVNKFLTLKGKAMEVKRA 330
>gi|348519655|ref|XP_003447345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oreochromis niloticus]
Length = 335
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D + +S+G+GF+T+ +
Sbjct: 8 EPEQLRKLFIGGLSFETTEESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVREV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+K K+DGRV AV S +N P ++++KIFVG + D + +F
Sbjct: 68 DDAMKARPHKVDGRVVEPKRAV---SREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + ++ TGK +GF + + + T++ R A +K+
Sbjct: 125 EKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKFHTINFHNCEVRKALSKQ 183
>gi|334330945|ref|XP_001364005.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Monodelphis domestica]
Length = 376
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 111 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 170
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 171 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 222
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 223 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 282
>gi|190347776|gb|EDK40115.2| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 14/181 (7%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL WDTT +GL FS +GE+ + ++ D ATGKS+G+GF+TFK ++ A+ +
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTK-SVDAVIQG 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+A + KIFVG + ++ + F+ +G I +
Sbjct: 60 DHVLDGKLIDPKRAIAREEQDKVG--------KIFVGGIDPMVNEKEFHDFFSQFGSIID 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGG 252
L DK TG+ +GF + + E V+ T+ GK + K+A+P G G
Sbjct: 112 AQLMIDKDTGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEV-----KRAEPRGAHHG 166
Query: 253 G 253
G
Sbjct: 167 G 167
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQR-KLFIRGLGWDTT 83
LT +D + + + D +LD +++ R+IA + + K+F+ G+
Sbjct: 45 LTFKDTKSVDAVIQGDHVLD---------GKLIDPKRAIAREEQDKVGKIFVGGIDPMVN 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+ FS +G + +A +++DK TG+S+G+GFITF
Sbjct: 96 EKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITF 131
>gi|197101465|ref|NP_001127331.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pongo abelii]
gi|75070806|sp|Q5RBU8.1|ROA2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|55728019|emb|CAH90762.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 81 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKA 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 90 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 149
Query: 109 GKSKGYGFITFKHID 123
GK +G+GF+TF D
Sbjct: 150 GKKRGFGFVTFDDHD 164
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELR 130
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
Query: 242 KKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G + P +A G G P
Sbjct: 191 RDSKNQAP--GQPGASQW----GSRVAPSAANGWAGQP 222
>gi|395540406|ref|XP_003772146.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Sarcophilus harrisii]
Length = 385
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF + A+
Sbjct: 34 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS 93
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
IDGRV AVA + P V+++K+FVG + D L +F YG+
Sbjct: 94 ARPHSIDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGK 150
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 151 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNTEVRKA 200
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 103 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 162
Query: 109 GKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVA 148
GK +G+GF+TF D + + I+G T A++
Sbjct: 163 GKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNTEVRKALS 202
>gi|291410921|ref|XP_002721736.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LRS F +G L + +V+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|395834191|ref|XP_003790095.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Otolemur garnettii]
Length = 306
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 131 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 181
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L T+ G + ++A K+
Sbjct: 182 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 234
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 186
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 187 MDPKLNKRRGFVFITFKE--------EEPVKKV 211
>gi|146415028|ref|XP_001483484.1| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 14/181 (7%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL WDTT +GL FS +GE+ + ++ D ATGKS+G+GF+TFK ++ A+ +
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTK-SVDAVIQG 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+A + KIFVG + ++ + F+ +G I +
Sbjct: 60 DHVLDGKLIDPKRAIAREEQDKVG--------KIFVGGIDPMVNEKEFHDFFSQFGSIID 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGG 252
L DK TG+ +GF + + E V+ T+ GK + K+A+P G G
Sbjct: 112 AQLMIDKDTGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEV-----KRAEPRGAHHG 166
Query: 253 G 253
G
Sbjct: 167 G 167
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQR-KLFIRGLGWDTT 83
LT +D + + + D +LD +++ R+IA + + K+F+ G+
Sbjct: 45 LTFKDTKSVDAVIQGDHVLD---------GKLIDPKRAIAREEQDKVGKIFVGGIDPMVN 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+ FS +G + +A +++DK TG+S+G+GFITF
Sbjct: 96 EKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITF 131
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 136 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 186
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K + + L TV G + ++A K+
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 39 SDQLLDVLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGEL 97
S + VL R D V++ +++A +K+F+ GL + T E +R F +GE+
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEI 185
Query: 98 EEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
E + +D K +G+ FITFK D L++ + G +A
Sbjct: 186 EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 19/221 (8%)
Query: 23 NRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDT 82
+++T D K+ R+++ + S++ RH + A A + K+FI GL WDT
Sbjct: 11 DKITGIDVNKMKLRISNHRH----SNSSPRHSEA-------ATAQREEWKMFIGGLSWDT 59
Query: 83 TTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTV 142
T + L+ FS +GE+ + + LD TG+S+G+GF+ FK + + + K++G+V
Sbjct: 60 TKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKEAESVDKVMDQKEHKLNGKVID 119
Query: 143 TNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTG 202
A A T PV +KIFVG + D +K+ +F +GE+E L D +T
Sbjct: 120 PKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTN 171
Query: 203 KPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
K +GF +K E + + V + ++A +K+
Sbjct: 172 KRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 212
>gi|322798126|gb|EFZ19965.1| hypothetical protein SINV_80273 [Solenopsis invicta]
Length = 370
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 20/193 (10%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATG---------------KS 111
DP KLF+ GL W T++E LR FS +G + + +++ D T +S
Sbjct: 36 DPAPGKLFVGGLSWQTSSEKLREYFSMFGTVTDVLIMKDPMTQTVLVHRAGSRLVRLQRS 95
Query: 112 KGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNV 171
+G+GFITF LK P +DG+ A N N +KIFVG V
Sbjct: 96 RGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNRAKQANRT-----KKIFVGGV 150
Query: 172 PNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
D S+D++ A+F +G++EE + D+QT + +GF ++ + T+
Sbjct: 151 SQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKN 210
Query: 232 KQLNCRLADNKKA 244
K++ C+ A K+A
Sbjct: 211 KKVECKKAQPKEA 223
>gi|51969640|dbj|BAD43512.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51969710|dbj|BAD43547.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 242
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T RK+F+ GL W+TT E L +F YGE+EE V++DKATGK+KG+GF+ FK GA A
Sbjct: 1 THRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEA 60
Query: 129 LKEPSKKIDGRVTVTNLA----VAGNSGNSTNNPVDVSL 163
LKEP K+I R LA A G+ PV +S+
Sbjct: 61 LKEPKKRILNRTATCQLASMGPAASGKGHDQPGPVKISM 99
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 164 RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALV 223
RKIFV +P + + + L+ F YGEIEE + DK TGK KGF ++KT +GA+ AL
Sbjct: 3 RKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALK 62
Query: 224 DPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGN 256
+P K + + C+LA MGP G G+
Sbjct: 63 EPKKRILNRTATCQLAS------MGPAASGKGH 89
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR+ FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 31 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 90
Query: 132 PSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
+DGR T G+ ++N KIFVG +P++
Sbjct: 91 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDN---NKSNKIFVGGIPHNCGET 147
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+L +F +G + E + +D + +P+GF ++ + A+ + GK++ +
Sbjct: 148 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 207
Query: 239 ADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
A+ + +K P G PG G ++P +A G G P
Sbjct: 208 AEPRDSKSQTP--GPPGASQW----GSRIMPSAANGWAGQP 242
>gi|302771077|ref|XP_002968957.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
gi|302816651|ref|XP_002990004.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300142315|gb|EFJ09017.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300163462|gb|EFJ30073.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
Length = 162
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTTTE L S F YGE+ +AV++ D+++G +G+GF+TF D L++
Sbjct: 2 KIFIGGLSWDTTTEKLESHFKKYGEITDAVIMRDRSSGNPRGFGFVTFADSDVCDRVLRD 61
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DGR ++ S P +KIFVG +P ++ ++ A+F+ +G +
Sbjct: 62 KH-VLDGRTVECKRSIPRESMLVVKGP---KTKKIFVGGIPPSITEEEFKAYFSSFGNVI 117
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
E + D TG+ +GF V+ + + + L
Sbjct: 118 EHQIMQDHNTGRSRGFGFIVFDSEQTVEDVL 148
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 165 KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD 224
KIF+G + D + +KL +HF YGEI + + D+ +G P+GF + ++ L D
Sbjct: 2 KIFIGGLSWDTTTEKLESHFKKYGEITDAVIMRDRSSGNPRGFGFVTFADSDVCDRVLRD 61
Query: 225 PIKTVDGKQLNCR 237
+DG+ + C+
Sbjct: 62 K-HVLDGRTVECK 73
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
P +K+F+ G+ T E ++ FS++G + E ++ D TG+S+G+GFI F
Sbjct: 87 PKTKKIFVGGIPPSITEEEFKAYFSSFGNVIEHQIMQDHNTGRSRGFGFIVF 138
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + P V+ +KIFVG + + + + +F +G++E
Sbjct: 61 HHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 115
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFESED-----VVEKVCEIHFHEINNKMVECKKAQP 165
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 37/53 (69%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +T E ++ F +G++E+A+++ DK T + +G+GF+TF+ D
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESED 140
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 136 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 186
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K + + L TV G + ++A K+
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 39 SDQLLDVLSSAVARHD-DVLESVRSIA-DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGE 96
S + VL R D V++ +++A DP +K+F+ GL + T E +R F +GE
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV-KKIFVGGLNPEATEEKIREYFGQFGE 184
Query: 97 LEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+E + +D K +G+ FITFK D L++ + G +A
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 129
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNV-PNDMSADKLLAHFACYGEI 190
++DGRV A+A +PV +KIFVG + P + +K+ +F +GEI
Sbjct: 130 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPESPTEEKIREYFGEFGEI 180
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
E L D + K +GF +K E + L TV G + ++A K+
Sbjct: 181 EAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
>gi|337451|gb|AAA36575.1| hnRNP type A/B protein [Homo sapiens]
gi|228098|prf||1717217A hnRNP protein A/B
Length = 284
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNV-PNDMSADKLLAHFACYGEI 190
++DGRV A+A +PV +KIFVG + P + +K+ +F +GEI
Sbjct: 129 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPESPTEEKIREYFGEFGEI 179
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
E L D + K +GF +K E + L TV G + ++A K+
Sbjct: 180 EAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 233
>gi|294658754|ref|XP_002770838.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
gi|202953359|emb|CAR66359.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
Length = 411
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT +GL F+ YGE+ + ++ D TGKS+G+GF+TFK +K
Sbjct: 87 KMFIGGLNWDTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDEVIKT 146
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+A + KIFVG + ++ F+ +G I
Sbjct: 147 -DHILDGKLIDPKRAIAREEQDKVG--------KIFVGGIDPMVNEKDFNDFFSQFGSII 197
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+ L DK TG+ +GF Y + + V+ T+ GK + + A+
Sbjct: 198 DAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAE 246
>gi|50548677|ref|XP_501808.1| YALI0C13860p [Yarrowia lipolytica]
gi|49647675|emb|CAG82118.1| YALI0C13860p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 9/170 (5%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W+TT E L + F+ +GE+ E V+ D +GKS+G+GF+TF+ + A+
Sbjct: 1 MFIGGLNWETTDESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDP-KCVNAVMAK 59
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
+DG++ A+ + T+ KIFVG V +D++ + F YG + +
Sbjct: 60 EHYLDGKIIDPKRAIPREEQDKTS--------KIFVGGVGSDVTEEDYKQFFEQYGTVID 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
L DK +G+P+GF + + + L P+ + K + + A+N+
Sbjct: 112 AQLMIDKDSGRPRGFGFVTFDSEQAMNTILAQPLLILKDKPIEVKRAENR 161
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 56 VLESVRSI--ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKG 113
+++ R+I + D T K+F+ G+G D T E + F YG + +A +++DK +G+ +G
Sbjct: 67 IIDPKRAIPREEQDKTS-KIFVGGVGSDVTEEDYKQFFEQYGTVIDAQLMIDKDSGRPRG 125
Query: 114 YGFITFKHIDGAMLALKEP 132
+GF+TF L +P
Sbjct: 126 FGFVTFDSEQAMNTILAQP 144
>gi|395834193|ref|XP_003790096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Otolemur garnettii]
Length = 355
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|17738267|ref|NP_524543.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|24650836|ref|NP_733251.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
gi|133253|sp|P07909.1|ROA1_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=PEN repeat clone P9;
AltName: Full=hnRNP core protein A1-A
gi|157654|gb|AAA28624.1| nulcear ribonucleoprotein [Drosophila melanogaster]
gi|908757|gb|AAA70426.1| unknown protein [Drosophila melanogaster]
gi|7301687|gb|AAF56801.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|23172511|gb|AAN14142.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
Length = 365
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 90
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 91 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSIRDYFQHFGNI 148
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA E VD + QLN ++ D KKA P D
Sbjct: 149 VDINIVIDKETGKKRGFAF-----VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQND 203
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 120 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 179
Query: 129 LKEPSKKIDGRVT 141
+ + +++G++
Sbjct: 180 VLQKQHQLNGKMV 192
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 42 LLDVLSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAV 101
L+ S++ RH + A A + K+FI GL WDTT + L+ FS +GE+ +
Sbjct: 141 LVKYHSNSSPRHSEA-------ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCT 193
Query: 102 VILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDV 161
+ LD TG+S+G+GF+ FK + + + K++G+V A A T PV
Sbjct: 194 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMK----TKEPV-- 247
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
+KIFVG + D +K+ +F +GE+E L D +T K +GF +K E +
Sbjct: 248 --KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKI 305
Query: 222 LVDPIKTVDGKQLNCRLADNKK 243
+ V + ++A +K+
Sbjct: 306 MEKKYHNVGLSKCEIKVAMSKE 327
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 124/297 (41%), Gaps = 59/297 (19%)
Query: 47 SSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDK 106
SS + R DD RKLF+ GL W+TT + LR F YGE++ V D
Sbjct: 31 SSEIGRDDD---------------RKLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDP 75
Query: 107 ATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNS--GNSTNNPVDVSLR 164
TG+S+G+ FI +K D ++ + AG+ N +P R
Sbjct: 76 TTGRSRGFAFIVYKSAD-----------------SIDKVVAAGDHIINNKKVDPKKAKAR 118
Query: 165 --KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
KIFVG + ++S D++ A+FA +G I E + FDKQ + K F + + L
Sbjct: 119 TGKIFVGGLIPEISDDEIRAYFAQFGNIVEMEMPFDKQKNQRKAFCFITFDSETVVNELL 178
Query: 223 VDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGH 282
P +T+ GK++ D KKA P PD N+ G GG G
Sbjct: 179 KTPKQTISGKEV-----DVKKATPK-PDNAPMMNIRGGGGGRNMRGGRGGRQFQGGNWGG 232
Query: 283 GYPFSGPPPLGHHLNSSLGGP-GQVPSSMGGVGAGGYGAGLGGPYGGYGGPGSTGYG 338
Y SS GGP GQ S G G +G+ GGYGGP YG
Sbjct: 233 NY-------------SSSGGPYGQ---SGGSWNQGNWGSNYDNYQGGYGGPMDGYYG 273
>gi|148230364|ref|NP_001091533.1| heterogeneous nuclear ribonucleoprotein D0 [Bos taurus]
gi|146231918|gb|ABQ13034.1| heterogeneous nuclear ribonucleoprotein D [Bos taurus]
gi|296486390|tpg|DAA28503.1| TPA: heterogeneous nuclear ribonucleoprotein D [Bos taurus]
Length = 306
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|410976792|ref|XP_003994797.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Felis catus]
Length = 380
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 75 IRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSK 134
I GL W TT EGLR F +GE++E +V+ D T +S+G+GF+TF G L +
Sbjct: 42 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRH 101
Query: 135 KIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEIEEG 193
++D + +A + P V+ +KIFVG + + + + + +F +G++++
Sbjct: 102 ELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDA 156
Query: 194 PLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP---MGPD 250
L FDK T + +GF +++ + +V+ + + ++N ++ + KKA+P M P
Sbjct: 157 MLMFDKTTNRHRGFGFVTFESED-----IVEKVCEIHFHEINNKMVECKKAQPKEVMSPT 211
Query: 251 GGGPGN 256
G G
Sbjct: 212 GSARGR 217
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +TT E ++ F +G++++A+++ DK T + +G+GF+TF+ D
Sbjct: 127 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 179
>gi|240849376|ref|NP_001155365.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
gi|49257602|gb|AAH74212.1| Unknown (protein for MGC:83385) [Xenopus laevis]
gi|157415960|gb|ABV54637.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
Length = 326
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F +GE+ + + +D TG+S+G+GFI FK L+
Sbjct: 66 KMFVGGLSWDTSKKDLKDYFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEH 125
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR+ A+A P+ +KIFVG + + DK+ +F +GEIE
Sbjct: 126 KEHRLDGRLIDPKKAMA-----MKKEPI----KKIFVGGLNPEAGEDKIREYFETFGEIE 176
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K E + L V G + ++A K+
Sbjct: 177 AVELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIKIAQPKEV 229
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 20/104 (19%)
Query: 45 VLSSAVARHDDVLESVRSIAD---ADPTQ---------RKLFIRGLGWDTTTEGLRSIFS 92
+L A D VLE D DP + +K+F+ GL + + +R F
Sbjct: 111 ILFKDAASVDKVLEHKEHRLDGRLIDPKKAMAMKKEPIKKIFVGGLNPEAGEDKIREYFE 170
Query: 93 AYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+GE+E + +D T K +G+ FITFK +EP KKI
Sbjct: 171 TFGEIEAVELPMDPKTNKRRGFVFITFKE--------EEPVKKI 206
>gi|345777448|ref|XP_003431598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Canis lupus
familiaris]
Length = 353
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RK+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L
Sbjct: 120 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 179
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ ++DGRV A+A +PV +KIFVG + + + +K+ +F +GEI
Sbjct: 180 QKEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEI 230
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTV 229
E L D ++ K +GF +K E + L T+
Sbjct: 231 EAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTI 269
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
LRK+FVG + D S L +F +GE+ + + D TG+ +GF ++K A + L
Sbjct: 119 LRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVL 178
Query: 223 VDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+DG R+ D KKA M D
Sbjct: 179 DQKEHRLDG-----RVIDPKKAMAMKKD 201
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 177 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 236
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D + K +G+ FITFK +EP KK+
Sbjct: 237 MDPKSNKRRGFVFITFKE--------EEPVKKV 261
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 14/226 (6%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
AD K+FI GL W+TT +GL++ FS YG + E ++ D ATG+S+G+GF+TF++
Sbjct: 189 ADISKDNCKMFIGGLNWETTEDGLKNYFSKYGNVVELKIMKDGATGRSRGFGFLTFENPS 248
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+K +DG+V ++ + T KIFVG + D+ +
Sbjct: 249 SVDEVVKT-QHILDGKVIDPKRSIPREEQDKTG--------KIFVGGIGTDVRPKEFEDF 299
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD--- 240
FA YG I + L DK TG+ +GF Y + + + GKQ+ + A+
Sbjct: 300 FAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSGDAVDRVCQNKYIEFKGKQIEIKRAEPRH 359
Query: 241 NKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGG--SYGGPGGHGY 284
N++A P + M + PP GG Y P Y
Sbjct: 360 NQRAAASQPMNTNQTPLGMVNPMAQMYQPPVMGGFNMYNQPAMQDY 405
>gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Length = 298
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 82 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 141
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 142 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 193
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 194 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 253
>gi|341889790|gb|EGT45725.1| hypothetical protein CAEBREN_10423 [Caenorhabditis brenneri]
Length = 311
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT E LR F +GE+ E +V+ D AT +++G+GFITF L
Sbjct: 35 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLHA 94
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DG+ +A T + +K+F+G + + + + +F YG++E
Sbjct: 95 RDHELDGKKIDPKVAFP----KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVE 150
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+ L +DK T + +GF + + E A ++GK + C+ A K+
Sbjct: 151 DAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEV 203
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 29/293 (9%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL DT ++ ++ F+ YG + + V+ D T +S+G+GF+TF+ L
Sbjct: 9 KIFVGGLHPDTDSDSMKKFFNKYGNVSDCVIKKDPVTQRSRGFGFVTFEDPGCVNSVLNA 68
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG+ AV +P +V+ K+F+G V + S D++ +F+ +G+++
Sbjct: 69 GPHLLDGKQIDPKPAVQKGQPAPQASPSNVNTNKVFIGGVAQNTSEDEIKKYFSSFGQVK 128
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDG 251
L +DK T + +GF ++ E + ++GK + +LA+++ A +
Sbjct: 129 NVQLMYDKTTKRMRGFGFVTFENDETVKKTCGVHFHNINGKSVEVKLAEDRSA-----NR 183
Query: 252 GGPGNVSMNHGDGM--GMVPPSAGGSYGGPGGH------------------GYPFSGPPP 291
G PG+ S +G G M S G YG GG GYPF+
Sbjct: 184 GVPGSQSNVYGGGNFPNMQFTSQYGPYGNSGGMLGSYGYGSYGYGGNYAVPGYPFAYDQT 243
Query: 292 LGHHLNSSLGGPGQVPSSMGGVGAGGYGAGLGGPYGGYGGPGSTGYGGLGGAG 344
+G + G SS + +G +G Y STGY G+ AG
Sbjct: 244 MGTNYGQEATNYGPGKSSYSNMSSGVSQSGT----SSYTSAPSTGYSGMNSAG 292
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 128
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 129 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 179
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K + + L TV G + ++A K+
Sbjct: 180 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 232
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 39 SDQLLDVLSSAVARHD-DVLESVRSIA-DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGE 96
S + VL R D V++ +++A DP +K+F+ GL + T E +R F +GE
Sbjct: 119 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV-KKIFVGGLNPEATEEKIREYFGQFGE 177
Query: 97 LEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+E + +D K +G+ FITFK D L++ + G +A
Sbjct: 178 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 227
>gi|440898655|gb|ELR50103.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Bos grunniens
mutus]
Length = 277
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 12 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 71
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 72 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 123
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 124 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 183
>gi|354547999|emb|CCE44734.1| hypothetical protein CPAR2_405380 [Candida parapsilosis]
Length = 513
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT EGL + FS +GE+ + ++ D ATG+S+G+GF+TFK + +K+
Sbjct: 194 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ 253
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A++ + + KIF+G + +S + F+ +G I
Sbjct: 254 -DHILDGKLIDPKRAISREDQD--------RVGKIFIGGIDPMVSEGEFNEFFSKFGTII 304
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ L DK TG+ +GF + + + V+ T+ GK + + A
Sbjct: 305 DCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVNKYLTLKGKAMEVKRA 352
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT + L++ F +G++ + VV+ D T +S+G+GFIT+ H A K
Sbjct: 26 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQK 85
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D L +F +G I
Sbjct: 86 ARPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSLRDYFQHFGSI 143
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P
Sbjct: 144 VDINIVMDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALP 194
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + LR F +G + + +++DK TGK +G+ F+ F D
Sbjct: 115 TVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 174
Query: 129 LKEPSKKIDGRVT 141
+ + +++G++
Sbjct: 175 VLQKQHQLNGKMV 187
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 149 GNSGNSTNNPVDVS----LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKP 204
+GNS + D++ +RK+F+G + + D L AHF +G+I + + D +T +
Sbjct: 7 NQNGNSNGHDDDITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRS 66
Query: 205 KGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+GF Y + + ++D + +++ R+ + K+A P
Sbjct: 67 RGFGFITY-----SHSTMIDEAQKARPHKIDGRVVEPKRAVP 103
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI G+ WDT + LR F +G++ EAV++ D+ TG+++G+GF+ F A + E
Sbjct: 46 KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 105
Query: 132 PSKKIDGRVTVTNLAV------AGNSGNSTNN----PVDVSLRKIFVGNVPNDMSADKLL 181
IDGR AV NS+++ P + +KIFVG + + ++
Sbjct: 106 K-HVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTESDFK 164
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G I + + +D T +P+GF Y + E + L ++GK + + A
Sbjct: 165 NYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVP 224
Query: 242 KKAKP 246
K P
Sbjct: 225 KDLSP 229
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 31 RKIVERLTSDQLLDVLSSAVARHD-DVLESVRSIADADPT-----QRKLFIRGLGWDTTT 84
R ++E+ D AV R D +V S + P +K+F+ GL T
Sbjct: 101 RVVMEKHVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTE 160
Query: 85 EGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTN 144
++ F +G + + VV+ D T + +G+GFIT+ + L + +++G++
Sbjct: 161 SDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVK 220
Query: 145 LAV 147
AV
Sbjct: 221 RAV 223
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 165 KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD 224
K+F+G + D + D+L +F +G++ E + D+ TG+ +GF V+ A+ +++
Sbjct: 46 KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 105
Query: 225 PIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
+DG R + KKA P + S +HG
Sbjct: 106 K-HVIDG-----RTVEAKKAVPRDDQNVFTRSNSSSHG 137
>gi|24650838|ref|NP_733252.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|24650840|ref|NP_733253.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
gi|157651|gb|AAA28621.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|16769554|gb|AAL28996.1| LD38464p [Drosophila melanogaster]
gi|23172512|gb|AAN14143.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|23172513|gb|AAN14144.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
Length = 361
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 27 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 86
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 87 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSIRDYFQHFGNI 144
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA E VD + QLN ++ D KKA P D
Sbjct: 145 VDINIVIDKETGKKRGFAF-----VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQND 199
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 116 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 175
Query: 129 LKEPSKKIDGRVT 141
+ + +++G++
Sbjct: 176 VLQKQHQLNGKMV 188
>gi|119626284|gb|EAX05879.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_f [Homo sapiens]
Length = 277
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 61 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 120
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 121 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 172
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 173 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 232
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+FI GL W+TT E L++ FS +GE+ E V+ D ATG+S+G+GF+TFK ++ M+
Sbjct: 102 KMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 161
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
++DG++ A+ + T KIFVG V D + F +G
Sbjct: 162 ----EHQLDGKLIDPKRAIPRDEQERT--------AKIFVGGVSQDATESDFKEFFMKFG 209
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + L P+ + GK + K+A+P G
Sbjct: 210 RVLDATLMMDKDTGRPRGFGFVTFDNDLAVERTLEGPLSIL-GKPIEV-----KRAQPRG 263
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ D T + F +G + +A +++DK TG+ +G+
Sbjct: 169 LIDPKRAIPRDEQERTAKIFVGGVSQDATESDFKEFFMKFGRVLDATLMMDKDTGRPRGF 228
Query: 115 GFITFKH 121
GF+TF +
Sbjct: 229 GFVTFDN 235
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDT+ +GL FS +GE+ + ++ D ATGKS+G+GF+TFK +K
Sbjct: 162 KMFIGGLNWDTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKR 221
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+A + KIFVG + ++ + F+ +G I
Sbjct: 222 -DHILDGKLIDPKRAIAREEQDKVG--------KIFVGGIDPMVNEKEFHDFFSQFGSII 272
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+ L DK TG+ +GF Y + + V+ T+ GK + + A+
Sbjct: 273 DAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAE 321
>gi|296196172|ref|XP_002745745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Callithrix jacchus]
Length = 325
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 60 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 119
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 120 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 171
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 172 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 231
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE+ E +V+ D AT +++G+GFITF L
Sbjct: 45 KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADPASVEKVLAH 104
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DG+ +A + + + +K+F+G + + + + +F YG++E
Sbjct: 105 DQHELDGKKIDPKVAFPKRA----QPKMIIKTKKVFIGGLSATSTLEDMRNYFEQYGKVE 160
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+ L FDK T + +GF + + + ++GK + C+ A K+
Sbjct: 161 DAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPKEV 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+FI GL +T E +R+ F YG++E+A+++ DK T + +G+GFITF + D + +
Sbjct: 133 KKVFIGGLSATSTLEDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 192
Query: 131 EPSKKIDGRVTVTNLA 146
+I+G++ A
Sbjct: 193 IHFHEINGKMVECKKA 208
>gi|307136289|gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp.
melo]
Length = 699
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 154/351 (43%), Gaps = 43/351 (12%)
Query: 11 ENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIADADPTQ 70
ENG L++ N+ D R +E+ D + ++ ++D +
Sbjct: 375 ENGQNF--LQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDS------------SSS 420
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
KLF+ G+ W+TT + FS YGE+ ++V+++DK TG+ +G+GF+TF A + LK
Sbjct: 421 GKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLK 480
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
IDGR V N+ + +KIFVG +P ++ + +F+ +G I
Sbjct: 481 -IDHIIDGRAVEVKRTVP---RADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRI 536
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALV-DPIKTVDGKQLNCRLADNKK-AKPMG 248
E + D +T + +GF ++ + D I + GKQ+ + A KK A
Sbjct: 537 IEHQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFN 596
Query: 249 PDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQVPS 308
+ G + G M GG Y G + GP + L + GG G +
Sbjct: 597 SNSGHTSS-------GYDMY--RCGGLYDDIIGTDF---GP----YDLYAPYGGFGGNYA 640
Query: 309 SMGGVGAGGYGAG----LGGPYG--GYGGPGSTGYGGLGGAGGGAGAGGAL 353
S G G+G G + G YG GYG P S GYG G G G GG++
Sbjct: 641 SFYGAYNYGFGFGASMYMNGRYGMNGYGAP-SVGYGINGYGKGYEGNGGSM 690
>gi|195353064|ref|XP_002043030.1| GM16385 [Drosophila sechellia]
gi|194127095|gb|EDW49138.1| GM16385 [Drosophila sechellia]
Length = 363
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 29 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 88
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 89 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSIRDYFQNFGNI 146
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA + + VD + QLN ++ D KKA P D
Sbjct: 147 VDINIVIDKETGKKRGFAFVEFDDYDP-----VDKVVLQKQHQLNGKMVDVKKALPKQND 201
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 118 TVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 177
Query: 129 LKEPSKKIDGRVT 141
+ + +++G++
Sbjct: 178 VLQKQHQLNGKMV 190
>gi|47086935|ref|NP_998467.1| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|44890703|gb|AAH66681.1| Zgc:77052 [Danio rerio]
Length = 309
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D TG+S+G+GFI FK D L++
Sbjct: 46 KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQ 105
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR A+A PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 106 KEHRLDGRQIDPKRAMA-----IKKEPV----KKIFVGGLNPETTEEKIREYFGSFGEIE 156
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L D +T K +GF +K + L V G + ++A
Sbjct: 157 TIELPTDPKTSKRRGFVFITFKEEFAVKKILEKKYHNVCGSKCEIKIA 204
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 39 SDQLLDVLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGEL 97
SD + VL R D ++ R++A +K+F+ GL +TT E +R F ++GE+
Sbjct: 96 SDSVDRVLQQKEHRLDGRQIDPKRAMAIKKEPVKKIFVGGLNPETTEEKIREYFGSFGEI 155
Query: 98 EEAVVILDKATGKSKGYGFITFKH 121
E + D T K +G+ FITFK
Sbjct: 156 ETIELPTDPKTSKRRGFVFITFKE 179
>gi|410915346|ref|XP_003971148.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Takifugu rubripes]
Length = 328
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
S+ D+ K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF
Sbjct: 12 SLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTD 71
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKL 180
L + ++D + +A + P V+ +KIFVG + + + +
Sbjct: 72 AASVDKVLAQQHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDV 126
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G++++ L FDK T + +GF ++ + +V+ + + ++N ++ +
Sbjct: 127 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENED-----IVEKVCEIHFHEINNKMVE 181
Query: 241 NKKAKP 246
KKA+P
Sbjct: 182 CKKAQP 187
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 26 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 85
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 86 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 137
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 138 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 197
>gi|148878011|gb|AAI46039.1| HNRNPD protein [Bos taurus]
Length = 355
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Homo sapiens]
gi|114594009|ref|XP_001143722.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pan troglodytes]
gi|395735083|ref|XP_003776519.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pongo abelii]
gi|402869389|ref|XP_003898745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Papio anubis]
gi|870745|dbj|BAA09523.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815613|gb|AAC23475.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|18645125|gb|AAH23977.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|19683928|gb|AAH26015.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|119626282|gb|EAX05877.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626286|gb|EAX05881.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626287|gb|EAX05882.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|208966456|dbj|BAG73242.1| heterogeneous nuclear ribonucleoprotein D [synthetic construct]
gi|380783617|gb|AFE63684.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|383417963|gb|AFH32195.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|384940050|gb|AFI33630.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|410265342|gb|JAA20637.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
gi|410292488|gb|JAA24844.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 306
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|410351151|gb|JAA42179.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 307
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 91 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 150
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 151 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 202
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 203 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 262
>gi|89271354|emb|CAJ83458.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 347
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT---------VTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKL 180
+DGR + G P + R KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETEL 130
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 REYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Query: 241 NKKAKPMGP------DGGGPGNVSMNHGDGMGMVPPSAGGSY 276
+ +K P GG S +G G PP+ SY
Sbjct: 191 PRDSKSQTPGPPGSNQWGGRAMQSTANG-WTGQPPPTWQQSY 231
>gi|94482834|gb|ABF22450.1| heterogeneous nuclear ribonucleoprotein A1 [Takifugu rubripes]
Length = 255
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LR+ F +G L + VV+ D + +S+G+GF+T+ +D
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVDEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
LA+ K+DGRV AV S +N P V+++KIFVG + D + +F
Sbjct: 68 DLAMTARPHKVDGRVVEPKRAV---SREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+G+IE + D+ +GK +GFA + + ++ T++ R A
Sbjct: 125 ERFGKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRIVIQKYHTINSHNCEVRKA 179
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT +R F +G++E +I D+ +
Sbjct: 82 VVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIITDRNS 141
Query: 109 GKSKGYGFITF 119
GK +G+ F+TF
Sbjct: 142 GKKRGFAFVTF 152
>gi|388580169|gb|EIM20486.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 335
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D D QRK+FI GL WDT + LR+ FS +G + + ++ D T +S+G+GF+TF ++
Sbjct: 38 DQDEAQRKIFIGGLNWDTDEDSLRNYFSKFGNVVQLNIMRDPNTNRSRGFGFLTFDNLQS 97
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
+ +DG++ + + + +KIFVG +P M ++++ +F
Sbjct: 98 VQDVMIR-DHWLDGKLIDPKRNMYRHE--------NFKHKKIFVGGIPLTMPVEQVVENF 148
Query: 185 -ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+ +G++ + L +DK+TG+ +GF ++T + A+ A+ + ++GK + + +
Sbjct: 149 ESVFGQVTDANLMYDKETGRSRGFGFLTFETEQQAEDAVKEGRFDLEGKSVEVKRVQTRN 208
Query: 244 AK 245
+
Sbjct: 209 ER 210
>gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Homo sapiens]
gi|386782249|ref|NP_001247736.1| heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|114594005|ref|XP_001143807.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pan troglodytes]
gi|297673867|ref|XP_002814969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Pongo abelii]
gi|402869391|ref|XP_003898746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Papio anubis]
gi|13124489|sp|Q14103.1|HNRPD_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|870749|dbj|BAA09525.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815612|gb|AAC23474.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|12803191|gb|AAH02401.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|63990762|gb|AAY40913.1| unknown [Homo sapiens]
gi|119626280|gb|EAX05875.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|119626281|gb|EAX05876.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|123982850|gb|ABM83166.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|123997529|gb|ABM86366.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|355687289|gb|EHH25873.1| Heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|380783619|gb|AFE63685.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|383417965|gb|AFH32196.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|384940052|gb|AFI33631.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
Length = 355
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|410351149|gb|JAA42178.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 356
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 91 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 150
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 151 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 202
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 203 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 262
>gi|397524667|ref|XP_003832310.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Pan paniscus]
Length = 355
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|164661105|ref|XP_001731675.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
gi|159105576|gb|EDP44461.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
Length = 367
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLAL 129
+F+ GL WDT E LR F +G + V+ D A+G+S+G+ F+TF K ++ M+
Sbjct: 1 MFVGGLNWDTDEESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFSDPKSVNAVMVR- 59
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ P +K FVG +P ++ D F +G
Sbjct: 60 ---EHFLDGKIIDPKRAIP--------RPEQSKTQKCFVGGLPQTVTQDSFKQLFQQFGH 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+ + + DK TG+P+GF ++ +G + L +DGKQ+ + A ++
Sbjct: 109 VLDSTVMMDKDTGRPRGFGFVTFENDDGVENTLAHQPLLLDGKQIEVKRAQSR 161
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 VLESVRSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I + ++ +K F+ GL T + + +F +G + ++ V++DK TG+ +G+
Sbjct: 67 IIDPKRAIPRPEQSKTQKCFVGGLPQTVTQDSFKQLFQQFGHVLDSTVMMDKDTGRPRGF 126
Query: 115 GFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
GF+TF++ DG L +DG+ A
Sbjct: 127 GFVTFENDDGVENTLAHQPLLLDGKQIEVKRA 158
>gi|351695030|gb|EHA97948.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Heterocephalus
glaber]
Length = 277
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 12 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 71
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 72 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 123
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 124 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 183
>gi|158296283|ref|XP_001237856.2| AGAP006668-PA [Anopheles gambiae str. PEST]
gi|157016437|gb|EAU76642.2| AGAP006668-PA [Anopheles gambiae str. PEST]
Length = 360
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 21/182 (11%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
S ++A +RKLF+ GL W+TT + LR F YGE+E V D TG+S+G+ FI +K
Sbjct: 59 SQSNARDDERKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKA 118
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNS--GNSTNNPVDVSLR--KIFVGNVPNDMSA 177
D ++ + AG N +P R KIFVG + +D+S
Sbjct: 119 SD-----------------SIDKVVAAGEHVLNNKKVDPKRAKARPGKIFVGGLTSDISD 161
Query: 178 DKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCR 237
+++ F +G I E L FDKQ + KGF Y++ + L P +T+ GK+++ +
Sbjct: 162 EEIKTFFGQFGTIVEVELPFDKQKNQRKGFCFITYESVQVVNELLKTPKQTIAGKEVDVK 221
Query: 238 LA 239
A
Sbjct: 222 KA 223
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 164 RKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALV 223
RK+FVG + + + L HF YGEIE + D TG+ +GFA VYK ++ +
Sbjct: 68 RKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASDS-----I 122
Query: 224 DPIKTVDGKQLNCRLADNKKAK 245
D + LN + D K+AK
Sbjct: 123 DKVVAAGEHVLNNKKVDPKRAK 144
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + P V+ +KIFVG + + + + +F +G++E
Sbjct: 61 HHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 115
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 165
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +T E ++ F +G++E+A+++ DK T + +G+GF+TF++ D
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 140
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQP 60
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + P V+ +KIFVG + + + + +F +G++E
Sbjct: 61 HHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 115
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 165
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +T E ++ F +G++E+A+++ DK T + +G+GF+TF++ D
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 140
>gi|332233349|ref|XP_003265864.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Nomascus leucogenys]
Length = 355
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + P V+ +KIFVG + + + + +F +G++E
Sbjct: 61 HHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 115
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 165
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +T E ++ F +G++E+A+++ DK T + +G+GF+TF++ D
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 140
>gi|413954777|gb|AFW87426.1| hypothetical protein ZEAMMB73_842369 [Zea mays]
Length = 283
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F YG++ EAVVI D+ATG+SKGYGF+TF+ + A
Sbjct: 35 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFRDPESAR 94
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSG 152
+A +P IDGR NLA+ G G
Sbjct: 95 MACMDPYPVIDGRRANCNLAILGRPG 120
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YG+I E + D+ TG+ KG+ ++ E A+
Sbjct: 35 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFRDPESAR 94
Query: 220 AALVDPIKTVDGKQLNCRLA 239
A +DP +DG++ NC LA
Sbjct: 95 MACMDPYPVIDGRRANCNLA 114
>gi|413954775|gb|AFW87424.1| hypothetical protein ZEAMMB73_842369 [Zea mays]
gi|413954776|gb|AFW87425.1| hypothetical protein ZEAMMB73_842369 [Zea mays]
Length = 284
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F YG++ EAVVI D+ATG+SKGYGF+TF+ + A
Sbjct: 35 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFRDPESAR 94
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSG 152
+A +P IDGR NLA+ G G
Sbjct: 95 MACMDPYPVIDGRRANCNLAILGRPG 120
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YG+I E + D+ TG+ KG+ ++ E A+
Sbjct: 35 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFRDPESAR 94
Query: 220 AALVDPIKTVDGKQLNCRLA 239
A +DP +DG++ NC LA
Sbjct: 95 MACMDPYPVIDGRRANCNLA 114
>gi|344268345|ref|XP_003406021.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Loxodonta africana]
Length = 348
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 90 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 149
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 150 DAAMCAR---PHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 204
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVY 212
+F YG+IE + D+Q+GK +GFA +
Sbjct: 205 YFEKYGKIETIEVMEDRQSGKKRGFAFVTF 234
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 21/180 (11%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHIDGAMLA 128
K+FI GL W+TT + L+ FS +GE+ E V+ D ATG+S+G+GF+TF K ++ M
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTVM-- 160
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
+KE S +DG++ A+ + T KIFVG V D + A F +G
Sbjct: 161 VKEHS--LDGKLIDPKRAIPRDEQERT--------AKIFVGGVSQDATEQDFEAFFQKFG 210
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + L P+ + GK + K+A+P G
Sbjct: 211 RVLDATLMMDKDTGRPRGFGFVTFDNEMAVERTLEGPLAIL-GKPIEV-----KRAQPRG 264
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 56 VLESVRSI-ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGY 114
+++ R+I D K+F+ G+ D T + + F +G + +A +++DK TG+ +G+
Sbjct: 170 LIDPKRAIPRDEQERTAKIFVGGVSQDATEQDFEAFFQKFGRVLDATLMMDKDTGRPRGF 229
Query: 115 GFITFKH 121
GF+TF +
Sbjct: 230 GFVTFDN 236
>gi|226503435|ref|NP_001145815.1| uncharacterized protein LOC100279322 [Zea mays]
gi|219884531|gb|ACL52640.1| unknown [Zea mays]
gi|238014728|gb|ACR38399.1| unknown [Zea mays]
gi|413943618|gb|AFW76267.1| hypothetical protein ZEAMMB73_511559 [Zea mays]
gi|413943619|gb|AFW76268.1| hypothetical protein ZEAMMB73_511559 [Zea mays]
Length = 279
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F YG++ EAVVI D+ATG+SKGYGF+TF+ + A
Sbjct: 30 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFQDPESAR 89
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGN 170
+A +P IDGR NLA+ G G + P +R + N
Sbjct: 90 MACMDPYPVIDGRRANCNLAILGRPGPAV--PFVAPIRPVIPYN 131
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YG+I E + D+ TG+ KG+ ++ E A+
Sbjct: 30 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFQDPESAR 89
Query: 220 AALVDPIKTVDGKQLNCRLA 239
A +DP +DG++ NC LA
Sbjct: 90 MACMDPYPVIDGRRANCNLA 109
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 136 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 186
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K + + L TV G + ++A K+
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 39 SDQLLDVLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGEL 97
S + VL R D V++ +++A +K+F+ GL + T E +R F +GE+
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEI 185
Query: 98 EEAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
E + +D K +G+ FITFK D L++ + G +A
Sbjct: 186 EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
>gi|410957357|ref|XP_003985295.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Felis catus]
Length = 290
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 25 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 84
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 85 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 136
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 137 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 196
>gi|213511640|ref|NP_001134235.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|209731708|gb|ACI66723.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|303664010|gb|ADM16122.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 228
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR F +G L + VV+ D A +S+G+GF T+ ++
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLREHFEQWGSLTDCVVMRDPANKRSRGFGFATYSGVNEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
A++ K+DGR+ AV+ +S+ V+++KIFVG + D L +F
Sbjct: 68 DAAMEARPHKVDGRLVEPKRAVSRE--DSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFE 125
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+G+IE + D+ +GK +GFA + + ++ T++G NC + +
Sbjct: 126 QFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTLNGH--NCEVRKALSRQ 183
Query: 246 PMGPDGGG 253
M G G
Sbjct: 184 EMQTTGVG 191
>gi|74001695|ref|XP_848950.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Canis lupus familiaris]
Length = 306
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|90083957|dbj|BAE90929.1| unnamed protein product [Macaca fascicularis]
Length = 317
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK---HIDGAML 127
RKLFI GL ++TT E LR+ + +G+L + VV+ D A+ +S+G+GF+TF +D AM
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 128 ALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFAC 186
A IDGRV AVA + P V+++K+FVG + D L +F
Sbjct: 81 ARPHS---IDGRVVEPKRAVA---REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
YG+I+ + D+Q+GK +GF + + ++ T++G R A
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 187
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIAD-------ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R++A A T +KLF+ G+ DT LR F YG+++ +I D+ +
Sbjct: 90 VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQS 149
Query: 109 GKSKGYGFITF 119
GK +G+GF+TF
Sbjct: 150 GKKRGFGFVTF 160
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 5/173 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
AL K+DGRV AV+ +S ++++KIFVG + D L +F
Sbjct: 68 AAALCARPHKVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 125
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 126 KYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 176
>gi|410915348|ref|XP_003971149.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 4
[Takifugu rubripes]
Length = 350
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
S+ D+ K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF
Sbjct: 12 SLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTD 71
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKL 180
L + ++D + +A + P V+ +KIFVG + + + +
Sbjct: 72 AASVDKVLAQQHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDV 126
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G++++ L FDK T + +GF ++ + +V+ + + ++N ++ +
Sbjct: 127 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENED-----IVEKVCEIHFHEINNKMVE 181
Query: 241 NKKAKP 246
KKA+P
Sbjct: 182 CKKAQP 187
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LR FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 45 KLFVGGLDWSTTQETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 104
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 105 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 164
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 165 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 224
Query: 242 KKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G +VP +A G G P
Sbjct: 225 RDSKSQAP--GQPGASQW----GSRVVPNAANGWAGQP 256
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLF+ G+ W+TT E + F +GE+ ++V++ D+ TG +G+GF+TF A L+
Sbjct: 89 RKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLE 148
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
E D +V + G+ T+ RKIFVG +P + D+L +F YG+I
Sbjct: 149 EDHVIDDRKVDLKRTLPRGDK--DTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDI 206
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKKA 244
E + +D TG+ +GF ++T + D + + KQ+ + A+ K+
Sbjct: 207 IEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRT 261
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
V V +RK+FVG V + +A+ +F +GE+ + + D+ TG P+GF + + A
Sbjct: 84 VFVYVRKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVA 143
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPP 270
+ L + ++ R D K+ P G VS +G +PP
Sbjct: 144 EKVLEED------HVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPP 189
>gi|393912245|gb|EJD76653.1| musashi [Loa loa]
Length = 336
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT EGLR F +GE+ E +V+ D AT +++G+GFITF L +
Sbjct: 31 KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTDPASVDKVLAQ 90
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DG+ +A + + + + +K+F+G + + + + +F YG++E
Sbjct: 91 ELHELDGKKIDPKVAFPKKA----QSKMIIKTKKVFIGGLSATSTLEDMKNYFEQYGKVE 146
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+ L FDK T + +GF + + + ++GK + C+ A K+
Sbjct: 147 DAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPKEV 199
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+FI GL +T E +++ F YG++E+A+++ DK T + +G+GFITF + D + +
Sbjct: 119 KKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 178
Query: 131 EPSKKIDGRVT 141
+I+G++
Sbjct: 179 IHFHEINGKMV 189
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 148 AGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGF 207
+ G S+N+P K+F+G + +A+ L +F +GE+ E + D T + +GF
Sbjct: 19 SSEDGTSSNDP-----GKMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGF 73
Query: 208 ALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAK 245
+ L + +DGK+++ ++A KKA+
Sbjct: 74 GFITFTDPASVDKVLAQELHELDGKKIDPKVAFPKKAQ 111
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 14/176 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLA 128
K+F+ G+ W+TT E F YG + ++V++ DK T +G+GF+TF ID +
Sbjct: 176 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL-- 233
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
E IDGR T+ + N P RKIFVG +P+ ++ D+L HF+ YG
Sbjct: 234 --EDEHVIDGR-TLKGQSQGSNVIKDGPRP-----RKIFVGGLPSSLTEDELREHFSPYG 285
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKK 243
+I E + D TG+ +GF +++ + + + + ++ + GKQ+ + A+ KK
Sbjct: 286 KIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 341
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 68 PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAML 127
P RK+F+ GL T + LR FS YG++ E ++LD +TG+S+G+GF+TF+ D
Sbjct: 258 PRPRKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVER 317
Query: 128 ALKE 131
+ E
Sbjct: 318 VISE 321
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 61 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 111
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D ++ K +GF +K E + L T+ G + ++A K+
Sbjct: 112 AIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 164
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 45 VLSSAVARHD-DVLESVRSIA-DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVV 102
VL R D V++ +++A DP +K+F+ GL + T E +R F +GE+E +
Sbjct: 57 VLDQKEHRLDGRVIDPKKAMAMKKDPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIEL 115
Query: 103 ILDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D + K +G+ FITFK +EP KK+
Sbjct: 116 PMDPKSNKRRGFVFITFKE--------EEPVKKV 141
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 18/236 (7%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
AD K+FI GL W+TT +GLR FS YG++EE ++ D ATG+S+G+GF+TF+
Sbjct: 115 ADLSKDSCKMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFESAS 174
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+K +DG+V A+ + T KIFVG + D+ +
Sbjct: 175 SVDEVVK-TQHILDGKVIDPKRAIPREEQDKTG--------KIFVGGIGPDVRPKEFEEF 225
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
FA +G I + L DK TG+ +GF Y T + + G+++ + A +
Sbjct: 226 FAQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDKVCQNKFIDFKGRKIEIKRAAPRH 285
Query: 244 AKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYP----FSGPPPLGHH 295
+ G P S N GMG + S G G+G+ FS P G++
Sbjct: 286 LQKTGG-ARQPAQQSSNSQYGMG----TGSNSSGQYPGYGFQDPMMFSNPMMSGYN 336
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF---KHI 122
+P Q RKLFI GL ++TT + LR F +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 724 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 783
Query: 123 DGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLA 182
D AM A P K+DGRV AV+ +S ++++KIFVG + D L
Sbjct: 784 DAAMCA--RPH-KVDGRVVEPKRAVSRE--DSVKPGAHLTVKKIFVGGIKEDTEEYNLRD 838
Query: 183 HFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F YG+IE + D+Q+GK +GFA + + +V T++G NC +
Sbjct: 839 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGH--NCEV 892
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ E LR FS +GE+ + +V+ + T +S+G+GF+TF L +
Sbjct: 22 KMFIGGLSWQTSPESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 82 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 137 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 187
>gi|354497793|ref|XP_003511003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Cricetulus griseus]
Length = 286
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 21 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 80
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 81 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 132
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 133 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 192
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 40 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 99
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVD----------VSLRKIFVGNVPNDMSADKLL 181
+DGR P + KIFVG +P++ +L
Sbjct: 100 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRNDNSKSNKIFVGGIPHNCGETELR 159
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 160 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 219
Query: 242 KKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ +K P G PG G ++P +A G G P
Sbjct: 220 RDSKSQVP--GQPGASQW----GSRVMPSAANGWAGQP 251
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Query: 158 PVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEG 217
PV K+FVG + + + L ++F+ YGE+ + + DK T + +GF +K
Sbjct: 33 PVRAQTWKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 92
Query: 218 AQAALVDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHG 262
L T+DG+ ++ KP P G P G
Sbjct: 93 VGTVLASRPHTLDGRNID--------PKPCTPRGMQPERTRPKEG 129
>gi|403263350|ref|XP_003924000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Saimiri boliviensis boliviensis]
Length = 306
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|317453642|gb|ADV19029.1| AT02853p [Drosophila melanogaster]
Length = 372
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 38 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 97
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 98 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSIRDYFQHFGNI 155
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA E VD + QLN ++ D KKA P D
Sbjct: 156 VDINIVIDKETGKKRGFAF-----VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQND 210
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 127 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 186
Query: 129 LKEPSKKIDGRVT 141
+ + +++G++
Sbjct: 187 VLQKQHQLNGKMV 199
>gi|149241445|ref|XP_001526315.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450438|gb|EDK44694.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 548
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT EGL F YGE+ + ++ D ATG+S+G+GF+TFK +KE
Sbjct: 205 KMFIGGLNWDTTEEGLAEHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKDPASVDAVIKE 264
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+A + KIFVG + ++ + F+ +G I
Sbjct: 265 -EHILDGKLIDPKRAIAREDQDRVG--------KIFVGGIDPMVTEREFNEFFSKFGSII 315
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ L DK TG+ +GF Y + + V+ T+ GK + + A
Sbjct: 316 DCQLMIDKDTGRSRGFGFITYDSPDAVDKVCVNKYLTLKGKAMEVKRA 363
>gi|74001715|ref|XP_857957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 11
[Canis lupus familiaris]
Length = 355
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|387018106|gb|AFJ51171.1| Heterogeneous nuclear ribonucleoprotein A0 [Crotalus adamanteus]
Length = 307
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI GL TT GLR F AYG L + VV+L+ T +S+ +GF+T+ ++ A A+
Sbjct: 8 KLFIGGLNVQTTEAGLREYFEAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEADAAMAA 67
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG V L A + +S ++K+FVG + D+ + L+ HF+ +G +E
Sbjct: 68 SPHAVDG--NVVELKRAVSREDSARPGAHAKVKKLFVGGLKGDLGENDLVEHFSQFGPVE 125
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ + +KQ+GK +GF ++ + A A V + G ++ + A
Sbjct: 126 KAEIISNKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKA 173
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 55 DVLESVRSIADADPTQ-------RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKA 107
+V+E R+++ D + +KLF+ GL D L FS +G +E+A +I +K
Sbjct: 75 NVVELKRAVSREDSARPGAHAKVKKLFVGGLKGDLGENDLVEHFSQFGPVEKAEIISNKQ 134
Query: 108 TGKSKGYGFITFKHIDGA 125
+GK +G+GF+ F++ D A
Sbjct: 135 SGKKRGFGFVYFQNHDAA 152
>gi|116256514|ref|NP_031542.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Mus musculus]
gi|29145079|gb|AAH49098.1| Heterogeneous nuclear ribonucleoprotein D [Mus musculus]
gi|148688366|gb|EDL20313.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Mus
musculus]
Length = 306
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 AAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++D + +A + P V+ +KIFVG + + + + +F +G++E
Sbjct: 61 HHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 115
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 165
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +T E ++ F +G++E+A+++ DK T + +G+GF+TF++ D
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 140
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 78 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 132
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 133 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 183
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL W+TT E L+ F +YG + + V++ DK TG +G+GF+TF+ + A A +
Sbjct: 51 KIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRAATK 110
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR AV + T + V RKIFVG +P + + + +F G +
Sbjct: 111 -RHELDGRQVEAKKAVP-KAEYITRSQVTKPTRKIFVGGLPLSCTEEDFMEYFERLGHVV 168
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E + +D QTG +GF + + + +V+ + ++ ++ + KKA+P
Sbjct: 169 EAHIMYDHQTGISRGFGFVTFSSED-----MVEKVFEQSQHEIKGKIVEVKKAEP 218
>gi|317183317|gb|ADV15462.1| LD46071p [Drosophila melanogaster]
Length = 396
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 62 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 121
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 122 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQSIRDYFQHFGNI 179
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA E VD + QLN ++ D KKA P D
Sbjct: 180 VDINIVIDKETGKKRGFAF-----VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQND 234
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 151 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 210
Query: 129 LKEPSKKIDGRVT 141
+ + +++G++
Sbjct: 211 VLQKQHQLNGKMV 223
>gi|403263352|ref|XP_003924001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Saimiri boliviensis boliviensis]
Length = 355
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|328711026|ref|XP_001943905.2| PREDICTED: hypothetical protein LOC100169433 [Acyrthosiphon pisum]
Length = 530
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T KLF+ GL W T+ + L+ F +G++ +++ D T +S+G+GFITF +
Sbjct: 216 TSAKLFVGGLSWQTSADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAETVEKV 275
Query: 129 LKEPSKKIDGRVTVTNLAVAGN---SGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
L P +DG+ A N +G+ T +KIFVG V D +AD++ A+F+
Sbjct: 276 LAVPIHTLDGKKIDPKHATPKNRPKAGSKT--------KKIFVGGVSQDTTADEVKAYFS 327
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+G++EE + D+ T + +GF ++ + T+ K++ C+ A K+
Sbjct: 328 QFGKVEETVMLMDQHTKRHRGFGFVTFENDDIVDTICEIHFHTIKNKKVECKKAQPKE 385
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 135 KIDGRVTVTNLAVAGN-SGNST-NNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
K +G V V + A + SG ST N+ + + K+FVG + SADKL +F +G++
Sbjct: 187 KQNGAVAVEQMVSAPSPSGRSTPNSSTEGTSAKLFVGGLSWQTSADKLKQYFGMFGDVTN 246
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNK 242
+ D T + +GF + AE + L PI T+DGK+++ + A K
Sbjct: 247 VLIMKDPITQRSRGFGFITFSDAETVEKVLAVPIHTLDGKKIDPKHATPK 296
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
Q KLF+ GL W+T E L+ F+ YGE+ + VV+ + +G+S+G+GF+TF + + L
Sbjct: 12 QGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVL 71
Query: 130 KEPSKKIDGRVT---VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
+ +DGR N S++ P K+F+G +P++++ L F+
Sbjct: 72 QNGPHVLDGRTIDPKPCNPRTLQKPKRSSSYP------KVFLGGLPSNVTETDLRTFFSR 125
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
YG++ E + +D++ K +GF ++ + + + + GKQ+ + A+ + +
Sbjct: 126 YGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAEPRDSNK 185
Query: 247 MGPDGGGPGNVSMNH 261
M G ++ N+
Sbjct: 186 MNDVGANQWGMNQNN 200
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH---IDGAMLAL 129
+FI GL W+TT + L FS +GE++E V+ D ATG+S+G+GF+TFK ++ M+
Sbjct: 1 MFIGGLNWETTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
+DG++ A+ + T KIFVG V D + + + FA +G
Sbjct: 60 ---EHFLDGKIIDPKRAIPRDEQEKTA--------KIFVGGVSQDATEEDFESFFAQFGR 108
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
+ + L DK TG+P+GF + + + L + GK + K+A+P G
Sbjct: 109 VIDATLMMDKDTGRPRGFGFVTFDSDAAVERCLEYHPLEILGKPIEV-----KRAQPRG 162
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 25 LTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSI-ADADPTQRKLFIRGLGWDTT 83
LT +D + + + + LD +++ R+I D K+F+ G+ D T
Sbjct: 45 LTFKDPKTVNTVMVKEHFLD---------GKIIDPKRAIPRDEQEKTAKIFVGGVSQDAT 95
Query: 84 TEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
E S F+ +G + +A +++DK TG+ +G+GF+TF
Sbjct: 96 EEDFESFFAQFGRVIDATLMMDKDTGRPRGFGFVTF 131
>gi|348535473|ref|XP_003455225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 332
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D+ TG+S+G+GFI FK L++
Sbjct: 75 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVEKVLEQ 134
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR A+A +PV +KIFVG + D S + + +F +GEIE
Sbjct: 135 KEHRLDGRQIDPKKAMA-----MKKDPV----KKIFVGGLNPDTSKEVIEEYFGTFGEIE 185
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L D +T K +GF YK + + V G + ++A
Sbjct: 186 TIELPQDPKTEKRRGFVFITYKEEAPVKKVMEKKYHNVGGSKCEIKIA 233
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH 121
DP +K+F+ GL DT+ E + F +GE+E + D T K +G+ FIT+K
Sbjct: 155 DPV-KKIFVGGLNPDTSKEVIEEYFGTFGEIETIELPQDPKTEKRRGFVFITYKE 208
>gi|116256512|ref|NP_001070733.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Mus musculus]
gi|33516945|sp|Q60668.2|HNRPD_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|148688367|gb|EDL20314.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Mus
musculus]
Length = 355
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 AAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|148224084|ref|NP_001080489.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus laevis]
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis]
Length = 324
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK + L+
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVLEH 124
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR+ A+A +P+ +KIFVG + + D++ +F +GEIE
Sbjct: 125 KEHRLDGRLIDPKKAMA-----MKKDPI----KKIFVGGLNPEAGEDQIREYFETFGEIE 175
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K + + L V G + ++A K+
Sbjct: 176 AIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVSGSKCEIKIAQPKEV 228
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP +K+F+ GL + + +R F +GE+E + +D T K +G+ FITFK D
Sbjct: 145 DPI-KKIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVK 203
Query: 127 LALKEPSKKIDGRVTVTNLA 146
L++ + G +A
Sbjct: 204 KILEKKFHNVSGSKCEIKIA 223
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + + TG+SKG+GFI FK L +
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEKVLDQ 124
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 125 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 175
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K E + L T+ G + ++A K+
Sbjct: 176 AIELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 228
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 121 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 180
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D T K +G+ FITFK +EP KK+
Sbjct: 181 MDPKTNKRRGFVFITFKE--------EEPVKKV 205
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVTVTNLAVAG---------NSGNSTNNPVDVSLR--KIFVGNVPNDMSADKL 180
+DGR G P + R KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETEL 130
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 KEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Query: 241 NKKAKPMGP 249
+ +K P
Sbjct: 191 PRDSKSQTP 199
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 165 KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD 224
K+FVG + + + L ++F+ YGE+ + + DK T + +GF +K L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 225 PIKTVDGKQLNCRLADNKKAKPMGPDGGGP 254
T+DG+ ++ KP P G P
Sbjct: 71 RPHTLDGRNID--------PKPCTPRGMQP 92
>gi|291389275|ref|XP_002711073.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK + FA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|354472673|ref|XP_003498562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Cricetulus griseus]
Length = 243
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 4 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 63
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 64 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 114
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF YK + + L TV G + ++A K+
Sbjct: 115 AIELPIDPKLNKRRGFVFITYKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 167
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 60 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELP 119
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDG 138
+D K +G+ FIT+K D L++ + G
Sbjct: 120 IDPKLNKRRGFVFITYKEEDPVKKVLEKKFHTVSG 154
>gi|211826253|gb|AAH11172.2| Hnrnpd protein [Mus musculus]
Length = 351
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 86 AAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 145
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 146 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 197
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 198 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 257
>gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Length = 358
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKGEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
Q KLF+ GL W+T E L+ F+ YGE+ + VV+ + +G+S+G+GF+TF + + L
Sbjct: 12 QGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVL 71
Query: 130 KEPSKKIDGRVT---VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
+ +DGR N S++ P K+F+G +P++++ L F+
Sbjct: 72 QNGPHVLDGRTIDPKPCNPRTLQKPKRSSSYP------KVFLGGLPSNVTETDLRTFFSR 125
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
YG++ E + +D++ K +GF ++ + + + + GKQ+ + A+ + +
Sbjct: 126 YGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAEPRDSNK 185
Query: 247 MGPDGGGPGNVSMNH 261
M G ++ N+
Sbjct: 186 MNDVGANQWGMNQNN 200
>gi|449533488|ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D-like [Cucumis sativus]
Length = 462
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 14/193 (7%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------- 119
D Q KLFI G+ W+T+ + L+ FS YGE+ VV+ DK T + +G+GF+ F
Sbjct: 2 DSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLD 61
Query: 120 -----KH-IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPN 173
KH IDG + K + + + T + + + + ++ +K FVG +P
Sbjct: 62 RVLQDKHTIDGKTVEAKRALSREE-QQTPARASNSNGRNSGGSGGGNMRTKKXFVGGLPP 120
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ + +F YG + + + +D+ T +P+GF + T E L ++GKQ
Sbjct: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
Query: 234 LNCRLADNKKAKP 246
+ + A K A P
Sbjct: 181 VEVKRALPKDANP 193
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 159 VDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGA 218
+D K+F+G + + S DKL +F+ YGE+ + DK T +P+GF V+
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
Query: 219 QAALVDPIKTVDGKQLNCRLADNKKAK 245
L D T+DGK + + A +++ +
Sbjct: 61 DRVLQDK-HTIDGKTVEAKRALSREEQ 86
>gi|194906902|ref|XP_001981451.1| GG11603 [Drosophila erecta]
gi|190656089|gb|EDV53321.1| GG11603 [Drosophila erecta]
Length = 358
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 27 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 86
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 87 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQCIRDYFQHFGNI 144
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA E VD + QLN ++ D KKA P D
Sbjct: 145 VDINIVMDKETGKKRGFAF-----VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQND 199
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 116 TVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 175
Query: 129 LKEPSKKIDGRVT 141
+ + +++G++
Sbjct: 176 VLQKQHQLNGKMV 188
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 7/174 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL W TT EGLR F+ YGE++E +V+ D T +S+G+GF+T+ L
Sbjct: 24 KMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSVDKVLAN 83
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
++D ++ LA N+T P V+ +KIFVG + + + + +F+ +G+I
Sbjct: 84 GPHELDTKLIDPKLAFP-RRPNATQQPKMVTRTKKIFVGGLSASTTLEDVKQYFSQFGKI 142
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
E+ L FDK T + +GFA ++ + +VD + + ++N ++ + KK+
Sbjct: 143 EDAMLMFDKATQRHRGFAFVTFECED-----VVDKVCEIHFHEINNKMVECKKS 191
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL TT E ++ FS +G++E+A+++ DKAT + +G+ F+TF+ D
Sbjct: 116 KKIFVGGLSASTTLEDVKQYFSQFGKIEDAMLMFDKATQRHRGFAFVTFECED 168
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 136 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 186
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K + + L TV G + ++A K+
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 45 VLSSAVARHD-DVLESVRSIA-DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVV 102
VL R D V++ +++A DP +K+F+ GL + T E +R F +GE+E +
Sbjct: 132 VLDQKEHRLDGRVIDPKKAMAMKKDPV-KKIFVGGLNPEATEEKIREYFGQFGEIEAIEL 190
Query: 103 ILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+D K +G+ FITFK D L++ + G +A
Sbjct: 191 PIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
>gi|195503537|ref|XP_002098694.1| GE23791 [Drosophila yakuba]
gi|194184795|gb|EDW98406.1| GE23791 [Drosophila yakuba]
Length = 356
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL + TT E L++ F +G + + VV+ D T +S+G+GFIT+ H A K
Sbjct: 26 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 85
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
KIDGRV AV +S N +++K+FVG + +D + +F +G I
Sbjct: 86 SRPHKIDGRVVEPKRAVPRQDIDSPN--AGATVKKLFVGALKDDHDEQCIRDYFQHFGNI 143
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
+ + DK+TGK +GFA E VD + QLN ++ D KKA P D
Sbjct: 144 VDINIVMDKETGKKRGFAF-----VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQND 198
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 69 TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLA 128
T +KLF+ L D + +R F +G + + +++DK TGK +G+ F+ F D
Sbjct: 115 TVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 174
Query: 129 LKEPSKKIDGRVT 141
+ + +++G++
Sbjct: 175 VLQKQHQLNGKMV 187
>gi|433344|gb|AAC50056.1| p37 AUF1 [Homo sapiens]
Length = 286
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK + + +
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K++G+V A A T PV +KIFVG + D +K+ +F +GE+E
Sbjct: 137 KEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREYFGGFGEVE 188
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
L D +T K +GF +K E + + V + ++A +K+
Sbjct: 189 SIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 240
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL DT E +R F +GE+E + +D T K +G+ FITFK +
Sbjct: 161 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKE--------E 212
Query: 131 EPSKKI 136
EP KKI
Sbjct: 213 EPVKKI 218
>gi|29124621|gb|AAH48898.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D TG+S+G+GFI FK G L +
Sbjct: 70 KMFVGGLSWDTSKKDLKDCFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR A+A PV +KIFVG + + + +++ +F +GEIE
Sbjct: 130 KEHRLDGRQIDPKKAMA-----MKKEPV----KKIFVGGLNPETTEERIREYFGAFGEIE 180
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
L D ++ K +GF +K E + L V G
Sbjct: 181 TIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVSG 220
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL +TT E +R F A+GE+E + +D + K +G+ FITFK + L+
Sbjct: 153 KKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILE 212
Query: 131 EPSKKIDG 138
+ + G
Sbjct: 213 KKYHNVSG 220
>gi|224102217|ref|XP_002312594.1| predicted protein [Populus trichocarpa]
gi|222852414|gb|EEE89961.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D Q KLFI G+ W+T+ E L F+ YG++ + VV+ DK TG+ +G+GF+ F D ++
Sbjct: 2 DSDQGKLFIGGISWETSEEKLGEYFTQYGDVLQTVVMKDKTTGRPRGFGFVVFA--DPSV 59
Query: 127 L-ALKEPSKKIDGRVTVTNLAVAGNSGN-----STNNPVDVSLRKIFVGNVPNDMSADKL 180
L + + + IDGR TV +GN +T++ ++ +KIFVG +P ++ D
Sbjct: 60 LDRVLQDTHTIDGR-TVKEQQTNARAGNLNPARNTSSGGNIRTKKIFVGGLPPTLTDDGF 118
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G + + + +D+ T +P+GF + + + L ++GKQ+ + A
Sbjct: 119 RQYFEAFGLVTDVVIMYDQSTQRPRGFGFISFDSEDAVDRVLQRTFHDLNGKQVEVKRAL 178
Query: 241 NKKAKP 246
K+A P
Sbjct: 179 PKEANP 184
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 136 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGQFGEIE 186
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K + + L TV G + ++A K+
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 45 VLSSAVARHD-DVLESVRSIA-DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVV 102
VL R D V++ +++A DP +K+F+ GL + T E +R F +GE+E +
Sbjct: 132 VLDQKEHRLDGRVIDPKKAMAMKKDPV-KKIFVGGLNPEATEEKIREYFGQFGEIEAIEL 190
Query: 103 ILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+D K +G+ FITFK D L++ + G +A
Sbjct: 191 PIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L++
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR+ A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 151 KEHRLDGRLIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 201
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K + + L V G + ++A K+
Sbjct: 202 AIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPKEV 254
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 45 VLSSAVARHD-DVLESVRSIA-DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVV 102
VL R D +++ +++A DP +K+F+ GL + T E +R F +GE+E +
Sbjct: 147 VLEQKEHRLDGRLIDPKKAMAMKKDPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIEL 205
Query: 103 ILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+D T K +G+ FITFK D L++ + G +A
Sbjct: 206 PMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVA 249
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDT+ +GL F+ +GE+ + ++ D ATGKS+G+GF+TFK +K
Sbjct: 162 KMFIGGLNWDTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKR 221
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG++ A+A + KIFVG + ++ + F+ +G I
Sbjct: 222 -DHILDGKLIDPKRAIAREEQDKVG--------KIFVGGIDPMVNEKEFHDFFSQFGSII 272
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+ L DK TG+ +GF Y + + V+ T+ GK + + A+
Sbjct: 273 DAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAE 321
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 14/190 (7%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYG--------FIT 118
D Q KLF+ G+ W+T + LR F+ YGE+ +A+V+ DK TG+ +G+G F+
Sbjct: 2 DSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGIRKNRCIYFLL 61
Query: 119 FKHIDGAMLALKEPSKKIDGRVT--VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMS 176
+D + +K + + +V+ NL + +SG N +KIFVG +P ++
Sbjct: 62 RYVLDLGKVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKT----KKIFVGGLPPTLT 117
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
++ +F YG + + + +D+ T +P+GF + + + + L + GKQ+
Sbjct: 118 DEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEV 177
Query: 237 RLADNKKAKP 246
+ A K A P
Sbjct: 178 KRALPKDANP 187
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
DA +K+F+ GL T E R F YG + + ++ D+AT + +G+GF++F D
Sbjct: 99 DAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDA 158
Query: 125 AMLALKEPSKKIDGRVTVTNLAV 147
L + + G+ A+
Sbjct: 159 VDSVLHKTFHDLSGKQVEVKRAL 181
>gi|327273004|ref|XP_003221273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Anolis
carolinensis]
Length = 334
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT + L+ F+ +GE+ + + LD TG+S+G+GFI FK + + +
Sbjct: 78 KMFIGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKVMDQ 137
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K++G+V A A T P+ +KIFVG + D +K+ +F +GE+E
Sbjct: 138 KEHKLNGKVIDPKRAKA----MKTKEPI----KKIFVGGLSPDTPEEKIREYFGGFGEVE 189
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK----AKPM 247
L D +T K +GF +K E + + V + ++A +K+ +
Sbjct: 190 SIELPMDNKTNKRRGFCFITFKDEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQW 249
Query: 248 GPDGGGPG 255
G GG PG
Sbjct: 250 GARGGFPG 257
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL DT E +R F +GE+E + +D T K +G+ FITFK +
Sbjct: 162 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKD--------E 213
Query: 131 EPSKKI 136
EP KKI
Sbjct: 214 EPVKKI 219
>gi|181914|gb|AAA35781.1| DNA-binding protein [Homo sapiens]
Length = 328
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 69 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 128
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 129 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 180
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +G +K E + + V + ++A +K+
Sbjct: 181 FGGFGEVESIELPMDNKTNKRRGLCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 240
>gi|224049399|ref|XP_002190694.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Taeniopygia guttata]
gi|449499942|ref|XP_004175399.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 318
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK + + +
Sbjct: 61 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 120
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K++G+V A A T PV +KIFVG + D +K+ +F +GE+E
Sbjct: 121 KEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREYFGGFGEVE 172
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
L D +T K +GF +K E + + V + ++A +K+
Sbjct: 173 SIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 224
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
+++ +P +K+F+ GL DT E +R F +GE+E + +D T K +G+ FITFK
Sbjct: 136 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 194
Query: 121 HIDGAMLALKEPSKKI 136
+EP KKI
Sbjct: 195 E--------EEPVKKI 202
>gi|67972636|ref|NP_997752.2| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|67677894|gb|AAH97183.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D TG+S+G+GFI FK G L +
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR A+A PV +KIFVG + + + +++ +F +GEIE
Sbjct: 130 KEHRLDGRQIDPKKAMA-----MKKEPV----KKIFVGGLNPETTEERIREYFGAFGEIE 180
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDG 231
L D ++ K +GF +K E + L V G
Sbjct: 181 TIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVSG 220
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL +TT E +R F A+GE+E + +D + K +G+ FITFK + L+
Sbjct: 153 KKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILE 212
Query: 131 EPSKKIDG 138
+ + G
Sbjct: 213 KKYHNVSG 220
>gi|359489471|ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257521 [Vitis vinifera]
gi|296089004|emb|CBI38707.3| unnamed protein product [Vitis vinifera]
Length = 267
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T + +R F +GE++EAVVI DK TG+SKGYGF+TFK D AM
Sbjct: 12 DTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDAAM 71
Query: 127 LALKEPSKKIDGRVTVTNLAVAG 149
A + PS IDGR NLA G
Sbjct: 72 RACQNPSPVIDGRRANCNLASLG 94
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + KIFVG + + D + +F +GEI+E + DK TG+ KG+ +K + A
Sbjct: 12 DTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDAAM 71
Query: 220 AALVDPIKTVDGKQLNCRLAD--NKKAKPMGPDGGG 253
A +P +DG++ NC LA K +P P G
Sbjct: 72 RACQNPSPVIDGRRANCNLASLGAHKTRPPTPQHGA 107
>gi|291393062|ref|XP_002713027.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 67 DPTQRK-LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q + LFI GL ++TT E LRS F +G L + VV+ D T +S+ +GF+T+ ++
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVEEV 68
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
+A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 69 DVAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYF 125
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + D+ +GK KGFA + + ++ TV+G R A +K+
Sbjct: 126 EQYGKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|41053816|ref|NP_956789.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|33416839|gb|AAH55499.1| Zgc:66127 [Danio rerio]
Length = 388
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D T +S+G+GF+T+ +
Sbjct: 10 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEV 69
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGR AV S ++ P +++K+FVG + D + L +F
Sbjct: 70 DAAMDARPHKVDGRAVEPKRAV---SREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYF 126
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G+I+E + +K + K +GFA + + ++ TV+G R A +++
Sbjct: 127 GQFGKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNCEVRKALSRE- 185
Query: 245 KPMGPDGGGPGNVSMN 260
G VSMN
Sbjct: 186 --------GMNRVSMN 193
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
A T +K+F+ G+ DT E LR F +G+++E ++ +K + K +G+ FITF D
Sbjct: 101 AHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEKNSDKRRGFAFITFDDHDAV 160
>gi|432933127|ref|XP_004081818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oryzias latipes]
Length = 340
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LR+ F +G L + VV+ D + +S+G+GF+T+ ++
Sbjct: 8 EPEQLRKLFIGGLSFETTEESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVTYSNVTEV 67
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+K K+DGRV AV S +N P ++++KIFVG + D + +F
Sbjct: 68 DDAMKARPHKVDGRVVEPKRAV---SREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYF 124
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
YG+IE + ++ TGK +GF + + + ++ R A +K+
Sbjct: 125 EKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHIINFHNCEVRKALSKQ 183
>gi|410047791|ref|XP_003954550.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2 [Pan troglodytes]
Length = 320
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 61 RSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
+S + +P Q RKLFI G+ ++T E LRS F +G L + +V+ D T S+G+GF+T+
Sbjct: 3 KSASPKEPEQLRKLFIGGVSFETIDESLRSHFEQWGMLTDCLVMRDPNTKCSRGFGFVTY 62
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSAD 178
++ A+ K+DGRV AV S + P ++++KIFVG + D
Sbjct: 63 ATVEEVDAAMNTRPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEH 119
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F Y +IE + D +GK +GFA + + ++ TV G R
Sbjct: 120 HLRDYFEQYEKIEVIEIMTDXGSGKKRGFAFVTFDDHDSVXKIVIQKYHTVKGHNCEVRK 179
Query: 239 ADNKK 243
A +K+
Sbjct: 180 ALSKQ 184
>gi|308448944|ref|XP_003087804.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
gi|308252629|gb|EFO96581.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
Length = 275
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 110/246 (44%), Gaps = 35/246 (14%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ G+ + E L S F+ YGE+ +A V D+ G+S+G+ F+ F +G LAL
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEI 190
+ I G+ +V S N +K+FVG +P+D S +L +HF +G++
Sbjct: 89 AREQTIKGK------SVEVKPAKSREN------KKVFVGGLPSDYSEQELRSHFEQFGKV 136
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMGPD 250
++ FDKQT + FA V++ E A A +T R D KKA P G
Sbjct: 137 DDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQT-----FGTRECDVKKAVPQGKR 191
Query: 251 G-GGPGNV----------------SMNHGDG-MGMVPPSAGGSYGGPGGHGYPFSGPPPL 292
G G + G G +G +P A + G +G F P
Sbjct: 192 FPGAQGRIPGGRGMYGGRGGNNNAGWYAGWGQIGTMPYGAAATAGWGDWYGNNFYQPQAG 251
Query: 293 GHHLNS 298
GHH N+
Sbjct: 252 GHHNNA 257
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 129 LKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
++ KI+G + T +G+ST D +KIFVG + +++ + L +HF YG
Sbjct: 1 MEATDNKINGNASET----IKENGHSTKGNED---KKIFVGGISPEVNNEDLSSHFTQYG 53
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPMG 248
E+ + + +D+ G+ +GFA + T EG + AL +T+ GK + + A +++ K +
Sbjct: 54 EVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVF 113
Query: 249 PDGGGPGNVS----MNHGDGMGMV 268
GG P + S +H + G V
Sbjct: 114 V-GGLPSDYSEQELRSHFEQFGKV 136
>gi|297278811|ref|XP_001114493.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Macaca
mulatta]
Length = 491
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
+RKLFI GL ++TT E LRS +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 134 RRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVTYATVQEVDAVM 193
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
K+DGR T AV SG + P ++++K+FVG + D L+ +F +G
Sbjct: 194 NARPHKVDGRAVETKRAV---SGEDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFG 250
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
++E + D+ +GK GFA + + ++ TV+ R A +K+
Sbjct: 251 KMEVIEIMTDRGSGKKSGFAFVTFDNHDSMDKIVIQKYHTVNSHNCEVRKALSKQ 305
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 57 LESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATG 109
+E+ R+++ D T +K+F+ G+ DT L F +G++E ++ D+ +G
Sbjct: 205 VETKRAVSGEDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSG 264
Query: 110 KSKGYGFITFKHID 123
K G+ F+TF + D
Sbjct: 265 KKSGFAFVTFDNHD 278
>gi|171451950|dbj|BAG15903.1| musashi [Dugesia japonica]
Length = 473
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 57 LESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGF 116
S+ I+ + KLF+ GL TT+E L+S FS +GE++E +V+ D +S+G+GF
Sbjct: 29 FSSLEEISASSNEPCKLFVGGLNPTTTSEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGF 88
Query: 117 ITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPND 174
+TF +G + LK+ + +D + LAV S P +S R KIF+G +
Sbjct: 89 VTFTDYNGVIKVLKQENHILDSKKIDPKLAVPK----SICQPEKISARTKKIFIGGIATS 144
Query: 175 MSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQL 234
+ +++ +F YGE+E L DK T + +GF + + A+ I + +
Sbjct: 145 STVEEIRQYFNRYGEVENCELMMDKATNRHRGFGFVTFLDEDVAEQ-----ICQIHYHNI 199
Query: 235 NCRLADNKKAKP 246
N ++ + KKA P
Sbjct: 200 NNKMVEAKKALP 211
>gi|357619641|gb|EHJ72131.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 315
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKH--- 121
D RK+FI GL + T+ E L++ F +GE+ + VV+ D T +S+G+GFIT+
Sbjct: 11 DEPEVHRKIFIGGLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHM 70
Query: 122 IDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLL 181
+D A L P +IDGR+ T AVA + N +++K+F+G + +D ++L
Sbjct: 71 VDDAQ--LNRPH-RIDGRMVETKRAVA--RQDIKNPEAGATVKKLFIGGIKDDHDEEQLR 125
Query: 182 AHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+F+ YG ++ + DK TGK +GF + + ++ ++GKQL+ + A
Sbjct: 126 EYFSNYGNVQNVSIVTDKGTGKKRGFGFVEFDDYDPVDKICLNAPHKINGKQLDVKKA 183
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 56 VLESVRSIADAD-------PTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
++E+ R++A D T +KLFI G+ D E LR FS YG ++ ++ DK T
Sbjct: 86 MVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHDEEQLREYFSNYGNVQNVSIVTDKGT 145
Query: 109 GKSKGYGFITFKHIDGA-MLALKEPSK 134
GK +G+GF+ F D + L P K
Sbjct: 146 GKKRGFGFVEFDDYDPVDKICLNAPHK 172
>gi|127138710|ref|NP_077380.2| heterogeneous nuclear ribonucleoprotein D0 isoform a [Rattus
norvegicus]
gi|149046816|gb|EDL99590.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Rattus
norvegicus]
Length = 353
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +G++ + + LD TG+S+G+GF+ FK +
Sbjct: 88 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESE 147
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 148 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 199
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 200 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 259
>gi|55742017|ref|NP_001006737.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
gi|49522454|gb|AAH75497.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 19/231 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 132 PSKKIDGRVT---------VTNLAVAGNSGNSTNNPVDVSLR--KIFVGNVPNDMSADKL 180
+DGR + G P + R KIFVG +P++ +L
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETEL 130
Query: 181 LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD 240
+F +G + E + +D + +P+GF ++ + A+ + GK++ + A+
Sbjct: 131 REYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Query: 241 NKKAKPMGP------DGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYP 285
+ +K P GG S +G G PP+ SY P G P
Sbjct: 191 PRDSKSQTPGPPGSNQWGGRAMQSTANG-WTGQPPPTWQQSY-SPQGMWMP 239
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 4/181 (2%)
Query: 60 VRSIADADPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
+R + D+ Q +KLF+ GL T E LRS +S +GE+ + VV+ D + KS+G+GF+T
Sbjct: 1 MRPVGDSKADQDKKLFVGGLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVT 60
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSAD 178
FK A K+DG+ + A+ T+ V +++KIFVG + D++ D
Sbjct: 61 FKEAASVDKAQANRPHKLDGKEVDSKRAMP---REETSPEVHAAVKKIFVGGLKKDVTND 117
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
L +F YG + + + K T +GFA + + ++ T++G + + R
Sbjct: 118 DLAEYFGQYGTVTDAQIVMAKDTNTSRGFAFVTFDDTDSVDKVILARPHTINGHKADVRK 177
Query: 239 A 239
A
Sbjct: 178 A 178
>gi|508270|gb|AAA64654.1| A+U-rich RNA-binding protein [Mus musculus]
Length = 269
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 59 AAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 118
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 119 SVDKVMDQKEHKLNGKVIDPKRAKAMK----TKEPV----KKIFVGGLSPDTPEEKIREY 170
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAE 216
F +GE+E L DK+T K +GF +K E
Sbjct: 171 FGGFGEVESIELPMDKKTNKRRGFCFITFKEEE 203
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ G+ W+TT E + F +GE+ ++V++ D+ TG +G+GF+TF A L+E
Sbjct: 67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
D +V + G+ T+ RKIFVG +P + D+L +F YG+I
Sbjct: 127 DHVIDDRKVDLKRTLPRGDK--DTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDII 184
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD-PIKTVDGKQLNCRLADNKKA 244
E + +D TG+ +GF ++T + D + + KQ+ + A+ K+
Sbjct: 185 EHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRT 238
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
RK+F+ GL + L++ F YG++ E ++ D TG+S+G+GF+TF+ D
Sbjct: 157 RKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSV 211
>gi|355745323|gb|EHH49948.1| hypothetical protein EGM_00696, partial [Macaca fascicularis]
Length = 313
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
+RKLFI GL ++TT E LRS +G L + VV+ D T +S+G+GF+T+ + +
Sbjct: 13 RRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVTYATVQEVDAVM 72
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYG 188
K+DGR T AV SG + P ++++K+FVG + D L+ +F +G
Sbjct: 73 NARPHKVDGRAVETKRAV---SGEDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFG 129
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
++E + D+ +GK GFA + + ++ TV+ R A +K+
Sbjct: 130 KMEVIEIMTDRGSGKKSGFAFVTFDNHDSMDKIVIQKYHTVNSHNCEVRKALSKQ 184
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 57 LESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATG 109
+E+ R+++ D T +K+F+ G+ DT L F +G++E ++ D+ +G
Sbjct: 84 VETKRAVSGEDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSG 143
Query: 110 KSKGYGFITFKHID 123
K G+ F+TF + D
Sbjct: 144 KKSGFAFVTFDNHD 157
>gi|118097545|ref|XP_414620.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Gallus
gallus]
Length = 307
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI GL TT GLR F+AYG L + VV+L+ T +S+ +GF+T+ ++ A A+
Sbjct: 8 KLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEADAAMAA 67
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG AV+ +S ++K+FVG + D+ L+ HF+ +G +E
Sbjct: 68 SPHAVDGNSVELKRAVSRE--DSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQFGPVE 125
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ + DKQ+GK +GF ++ + A A V + G ++ + A
Sbjct: 126 KAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKA 173
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 57 LESVRSIADADPTQ-------RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATG 109
+E R+++ D + +KLF+ GL D L FS +G +E+A +I DK +G
Sbjct: 77 VELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQFGPVEKAEIIADKQSG 136
Query: 110 KSKGYGFITFKHIDGA 125
K +G+GF+ F++ D A
Sbjct: 137 KKRGFGFVYFQNHDAA 152
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
L K+F+G + + L HFA YG + + + + QT + + F Y E A AA
Sbjct: 5 QLCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEADAA 64
Query: 222 LVDPIKTVDGKQLNCRLADNKK--AKP 246
+ VDG + + A +++ AKP
Sbjct: 65 MAASPHAVDGNSVELKRAVSREDSAKP 91
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 13/223 (5%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
AD K+FI GL W+TT E LR F+ YG + + ++ D TG+S+G+GF+TF+H
Sbjct: 87 ADISKDNCKMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPS 146
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+K +DG+V ++ + T KIFVG + D+ +
Sbjct: 147 SVDEVVKT-QHILDGKVIDPKRSIPREEQDKTG--------KIFVGGIGADVRPKEFEEF 197
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F+ YG I + L DK TG+ +GF Y + + GKQ+ + A +
Sbjct: 198 FSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIEIKRAQPRH 257
Query: 244 AKPMGPDGGGPGNVSMNHGD--GMGMVPPSAGGSYGGPGGHGY 284
+ G P N ++ + +G P A Y P G+
Sbjct: 258 LQKGQYGGANPNNRNIQYQQTGAIGQAP--ANAMYQNPMMAGF 298
>gi|410292490|gb|JAA24845.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 336
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK + + +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K++G+V A A T PV +KIFVG + D +K+ +F +GE+E
Sbjct: 139 KEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREYFGGFGEVE 190
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
L D +T K +GF +K E + + V + ++A +K+
Sbjct: 191 SIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 242
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
+++ +P +K+F+ GL DT E +R F +GE+E + +D T K +G+ FITFK
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 121 HIDGAMLALKEPSKKI 136
+EP KKI
Sbjct: 213 E--------EEPVKKI 220
>gi|444723247|gb|ELW63906.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Tupaia
chinensis]
Length = 296
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 43 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 102
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 103 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 154
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
F +GE+E L D +T K +GF +K E + +
Sbjct: 155 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 193
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 5/148 (3%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 134 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 193
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 194 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 250
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVY 212
YG+IE + D+ +GK +GFA +
Sbjct: 251 EQYGKIEVIEIMTDRGSGKKRGFAFVTF 278
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT LR F YG++E ++ D+ +
Sbjct: 208 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGS 267
Query: 109 GKSKGYGFITFKHIDGA 125
GK +G+ F+TF D
Sbjct: 268 GKKRGFAFVTFDDHDSV 284
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
LRK+F+G + + + + L +HF +G + + + D T + +GF Y T E AA
Sbjct: 137 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 196
Query: 222 LVDPIKTVDGK 232
+ VDG+
Sbjct: 197 MNARPHKVDGR 207
>gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 215
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 1 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 60
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
+ + K++G+V A A T PV +KIFVG + D +K+ +F
Sbjct: 61 DKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREYFG 112
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
+GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 113 GFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 170
>gi|13124487|sp|Q9JJ54.1|HNRPD_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|9588096|dbj|BAB03465.1| RNA binding protein p45AUF1 [Rattus norvegicus]
Length = 353
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +G++ + + LD TG+S+G+GF+ FK +
Sbjct: 88 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESE 147
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 148 SVDKVMDQKEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREY 199
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 200 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 259
>gi|223647556|gb|ACN10536.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 344
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D+ TG+S+G+GFI FK L++
Sbjct: 82 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAVSVDKVLEQ 141
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR A+A PV +KIFVG + D + + +F +GEIE
Sbjct: 142 KEHRLDGRQIDPKKAMA-----MKKEPV----KKIFVGGLNPDTDKEVIQEYFGTFGEIE 192
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L D +T K +GF YK + L V G + ++A
Sbjct: 193 TIELPQDPKTEKRRGFVFITYKDETPVKKVLEKKFHNVSGSKCEIKIA 240
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 150/358 (41%), Gaps = 42/358 (11%)
Query: 41 QLLDVLSSAVARHDDVL-ESVR-SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELE 98
Q + S A A + DV E V+ S D KLF+ G+ W+T+ E + FS YGE+
Sbjct: 8 QHSQLESEADAYNVDVNDEHVKPSFNRRDSFSGKLFVGGISWETSQESFFNYFSKYGEVT 67
Query: 99 EAVVILDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP 158
++V++ +K +G+ +G+GF+TF + A L + ID RV V
Sbjct: 68 DSVIMTNKLSGRPRGFGFVTFANSAVADEVLAQE-HTIDHRVVEVKRTVP-------RED 119
Query: 159 VDVS----LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKT 214
VDV+ +KIFVG + + D+L +F+ YG + E + D TG+ +GF +
Sbjct: 120 VDVTGVFKTKKIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDD 179
Query: 215 AEGAQAAL-VDPIKTVDGKQLNCRLADNKKA-----KPMGPDGGGPGNVSMNHGDGMGMV 268
+ + V I + GKQ+ + A+ K++ GG GN HG
Sbjct: 180 EDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSGVDYCNTSRKSYGGFGNEMDGHGGN---- 235
Query: 269 PPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSLGGPGQVPSSMGGVGA------------G 316
S ++G GG Y SG H + S GG G
Sbjct: 236 -SSRNRNHGKRGGQ-YTGSGMNGAYGHFDGSFGGSAATVYGGYCGYGYEFGYGGPMYCFG 293
Query: 317 GYGAGLGGPYGGYGGPGSTGYGGL---GGAGGGAGAGGALGGAAGGLGGGSSLYRLPP 371
GYG G GGY G G T YG + G AG G+GG G G + R P
Sbjct: 294 GYGLNSYGNPGGY-GSGITSYGDVNAYGRAGSFNGSGGYDSSKVAEKGDGPTTGRYHP 350
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D + KLFI G+ W+TT + L+ F +GE+ EAV++ D+ T +++G+GF+ F A
Sbjct: 2 DSEKGKLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFADPAIAD 61
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSGNSTNN--------PVDVSLRKIFVGNVPNDMSAD 178
+ + IDGR A+ + N P V +KIFVG + ++ +
Sbjct: 62 RVVLD-KHTIDGRTVEAKKAIPRDDQQHMNRNSNIAHAPPSQVRTKKIFVGGLAPTVTEN 120
Query: 179 KLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRL 238
+F +G I + + +D T +P+GF Y + + L ++GK + +
Sbjct: 121 DFRKYFEQFGTITDVVVMYDHSTQRPRGFGFITYDSEDAVDQVLQKTFHDLNGKMVEVKR 180
Query: 239 ADNKKAKP 246
A K+ P
Sbjct: 181 AVPKELSP 188
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 165 KIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVD 224
K+F+G + + + D+L +F +GE+ E + D+ T + +GF V+ A A+ D
Sbjct: 7 KLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVF-----ADPAIAD 61
Query: 225 PIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPS 271
+ +D ++ R + KKA P MN + PPS
Sbjct: 62 RV-VLDKHTIDGRTVEAKKAIPRDDQ------QHMNRNSNIAHAPPS 101
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L++
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR+ A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 151 KEHRLDGRLIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 201
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K + + L V G + ++A K+
Sbjct: 202 AIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPKEV 254
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
DP +K+F+ GL + T E +R F +GE+E + +D T K +G+ FITFK D
Sbjct: 171 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVK 229
Query: 127 LALKEPSKKIDGRVTVTNLA 146
L++ + G +A
Sbjct: 230 KVLEKKFHNVSGSKCEIKVA 249
>gi|119626277|gb|EAX05872.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_a [Homo sapiens]
Length = 377
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK +
Sbjct: 90 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 149
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 150 SVDKVMDQKEHKLNGKVIDPKRAKAMK----TKEPV----KKIFVGGLSPDTPEEKIREY 201
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
F +GE+E L D +T K +GF +K E P+K + K+
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEE--------PVKKIMEKK 243
>gi|127139464|ref|NP_001076009.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Rattus
norvegicus]
gi|149046817|gb|EDL99591.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Rattus
norvegicus]
Length = 304
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +G++ + + LD TG+S+G+GF+ FK +
Sbjct: 88 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESE 147
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 148 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 199
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 200 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 259
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 65 DADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDG 124
D Q K+FI GL W+TT + L FS YGE+ + VV+ + TG+S+G+GFITF +
Sbjct: 14 DNSNEQGKMFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNN 73
Query: 125 AMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR--------KIFVGNVPNDMS 176
L L+ +D R + N V R K+F+G +P++++
Sbjct: 74 VGLVLQNTPHILDNRT------IDPKPCNPRAEMVRAPRRSMGTGNGYKVFLGGLPSNLT 127
Query: 177 ADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNC 236
L F+ YG++ E + +D++ K +GF +++ E + +++GKQ+
Sbjct: 128 ETDLRNFFSQYGKVSEVVIMYDQEKKKSRGFGFLTFESEESVDRCTGEHYVSINGKQVEI 187
Query: 237 RLAD 240
+ A+
Sbjct: 188 KKAE 191
>gi|334350508|ref|XP_003342364.1| PREDICTED: hypothetical protein LOC100617798 [Monodelphis
domestica]
Length = 675
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL TT LRS F A+G L + VV+++ T +S+ +GFITF + A A+
Sbjct: 156 KLFVGGLSPYTTEIRLRSYFEAFGCLRDCVVVMNAQTNRSRCFGFITFSSLSEADAAMAA 215
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DG + L A + +S ++KIFVG + D+S L+ HF+ +G +E
Sbjct: 216 SPHEVDG--SRVELKRAVSREDSCKPGAHARVKKIFVGGIKGDVSESDLVRHFSQFGPVE 273
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ + +KQ+GK +GF + + A A V + G ++ + A
Sbjct: 274 KAEIIVNKQSGKKRGFGFVHFFDHDTADKAAVIKFHPIQGHRVEVKKA 321
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 46 LSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILD 105
L AV+R D S + A A +K+F+ G+ D + L FS +G +E+A +I++
Sbjct: 227 LKRAVSRED----SCKPGAHA--RVKKIFVGGIKGDVSESDLVRHFSQFGPVEKAEIIVN 280
Query: 106 KATGKSKGYGFITFKHIDGA 125
K +GK +G+GF+ F D A
Sbjct: 281 KQSGKKRGFGFVHFFDHDTA 300
>gi|160333913|ref|NP_001103930.1| heterogeneous nuclear ribonucleoprotein D0 [Danio rerio]
gi|141796298|gb|AAI39675.1| Hnrnpd protein [Danio rerio]
Length = 314
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDTT + L+ F+ +GE+ + + LD TG+S+G+GF+ FK + + +
Sbjct: 55 KMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLFKEAESVEKVITQ 114
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K++G+V A A T PV +KIFVG + D +K+ +F YGE+E
Sbjct: 115 KEHKLNGKVIDPKKAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREYFDAYGEVE 166
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
L + +T K +GF +K E + +
Sbjct: 167 SIELPMENKTNKRRGFCFITFKEEEPVKKIM 197
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
+++ +P +K+F+ GL DT E +R F AYGE+E + ++ T K +G+ FITFK
Sbjct: 130 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFDAYGEVESIELPMENKTNKRRGFCFITFK 188
Query: 121 HIDGAMLALKEPSKKI 136
+EP KKI
Sbjct: 189 E--------EEPVKKI 196
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 61 KEHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 111
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D + K +GF +K E + L T+ G + ++A K+
Sbjct: 112 AIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 164
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 57 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 116
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D K +G+ FITFK +EP KK+
Sbjct: 117 MDPKLNKRRGFVFITFKE--------EEPVKKV 141
>gi|50059467|gb|AAT02209.2| AUF1 similar protein [Paracentrotus lividus]
gi|51872093|gb|AAU12170.1| AUF1-like protein [Paracentrotus lividus]
Length = 361
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+KLF+ GL W+TT E L+ FSAYG +++ + D+ T K +G+GFI F+ D L
Sbjct: 50 KKLFVGGLAWNTTPETLQQYFSAYGTVQDCEIKKDQVTKKPRGFGFILFESADSVTKVLD 109
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPV--DVSLRKIFVGNVPNDMSADKLLAHFACYG 188
P K+D + A NP+ +KIF+G + +D+ D + ++F+ +G
Sbjct: 110 VPEHKVDDKTIDPKPA----------NPLKKPEKKKKIFIGGIGSDLKDDDIKSYFSQFG 159
Query: 189 EIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKPM 247
+ E DK TG+ GFA Y+T++ AQ A T+ K++ A +++ +
Sbjct: 160 TVVETEFPEDKTTGRRLGFAFVKYETSDEAQKAQNSRFHTISNKKVEVSEAVSREERQQ 218
>gi|297744195|emb|CBI37165.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 15/193 (7%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D + KLF+ G+ WDTT E L+ F+ YG++ + V++ DK TG+ +G+GF+ F D ++
Sbjct: 2 DSDEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFA--DPSV 59
Query: 127 L-ALKEPSKKIDGRVTVTNLAVA-----------GNSGNSTNNP-VDVSLRKIFVGNVPN 173
L A+ + IDGR A++ N+G S++ + +KIFVG +P+
Sbjct: 60 LDAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGLPS 119
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ + +F YG + + + +D+ T +P+GF + T + L ++GK
Sbjct: 120 TLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKL 179
Query: 234 LNCRLADNKKAKP 246
+ + A K A P
Sbjct: 180 VEVKRALPKDANP 192
>gi|432901707|ref|XP_004076907.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 279
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ FS +GE+ + + +D TG+S+G+GF+ FK L++
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSSSVDKVLEQ 116
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR A+A ++RKIFVG + + + + + +F +GEIE
Sbjct: 117 KEHRLDGRQIDPKRAMAMKK---------EAVRKIFVGGLNPEATEEAIREYFGAFGEIE 167
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCR 237
L D ++ K +GF YK + L T++G + R
Sbjct: 168 TIELPIDPKSKKRRGFIFITYKDEASVKKCLEKKYHTIEGGRCERR 213
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
R++A RK+F+ GL + T E +R F A+GE+E + +D + K +G+ FIT+K
Sbjct: 130 RAMAMKKEAVRKIFVGGLNPEATEEAIREYFGAFGEIETIELPIDPKSKKRRGFIFITYK 189
Query: 121 HIDGAMLALKEPSKKIDG 138
L++ I+G
Sbjct: 190 DEASVKKCLEKKYHTIEG 207
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W+TT E L+ F YGE+ + VV+ + +G+S+G+GF+TF L L+
Sbjct: 1 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQN 60
Query: 132 PSKKIDGR------VTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFA 185
++DGR L SG K+F+G +P++++ L ++F
Sbjct: 61 GPHQLDGRTIDPKPCNPRTLQKPKRSG---------GFPKVFLGGLPSNVTETDLRSYFT 111
Query: 186 CYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADN 241
+G++ E + +D++ K +GF ++ E + + ++GKQ+ + A++
Sbjct: 112 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAES 167
>gi|308490851|ref|XP_003107617.1| CRE-MSI-1 protein [Caenorhabditis remanei]
gi|308250486|gb|EFO94438.1| CRE-MSI-1 protein [Caenorhabditis remanei]
Length = 335
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W TT E LR F +GE+ E +V+ D AT +++G+GFITF L
Sbjct: 42 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNA 101
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DG+ +A T + +K+F+G + + + L +F YG++E
Sbjct: 102 REHELDGKKIDPKVAFP----KRTQAKLVTKTKKVFIGGLSATSTLEDLKQYFETYGKVE 157
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+ L +DK T + +GF + + E A ++GK + C+ A K+
Sbjct: 158 DAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEV 210
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 70 QRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLAL 129
Q KLFI G+ W+TT E L+ F AYGE+ E V++ D+ TG+++G+GF+ F + A L
Sbjct: 5 QGKLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVL 64
Query: 130 KEPSKKIDGRVTV---TNLAVAGNSGNSTNNP---VDVSLRKIFVGNVPNDMSADKLLAH 183
+ IDGRV V +V +G++ P +KIFVG + ++++ D +
Sbjct: 65 LDKHT-IDGRVAVPRDEQHSVVKANGSAVAGPGGHASSKTKKIFVGGLGSNVTEDDFRKY 123
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +G I + + +D T +P+GF + T E VD + +L ++ + K+
Sbjct: 124 FEQFGTITDVVVMYDHATQRPRGFGFITFDTEEA-----VDNVLHKTFHELKEKMVEVKR 178
Query: 244 AKP 246
A P
Sbjct: 179 AVP 181
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
A +K+F+ GLG + T + R F +G + + VV+ D AT + +G+GFITF
Sbjct: 99 ASSKTKKIFVGGLGSNVTEDDFRKYFEQFGTITDVVVMYDHATQRPRGFGFITF 152
>gi|222423819|dbj|BAH19875.1| AT4G26650 [Arabidopsis thaliana]
Length = 452
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 45/274 (16%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT E L+ F YG+L EAV++ D+ TG+++G+GFI F
Sbjct: 13 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 72
Query: 120 KH-IDGAMLALKEPSKKIDGRVT--------VTNLAVAGNSGNSTNNPVDVSLRKIFVGN 170
KH IDG + K+ + D +V + + + GN G + +KIFVG
Sbjct: 73 KHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGAR-------TKKIFVGG 125
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
+P+ ++ + +F +G I + + +D T +P+GF + + E L ++
Sbjct: 126 LPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELN 185
Query: 231 GKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVP-PSAGGSYGGPGGHGYPFSGP 289
GK + + A K+ P+ + +G+ G+VP S+ SY F+
Sbjct: 186 GKMIEVKRAVPKELSSTTPNRSPL----IGYGNNYGVVPNRSSANSY---------FNSF 232
Query: 290 PPLGHHLNSSLGGPGQV-PSSMGGVGAGGYGAGL 322
PP G++ N++LG G+ P G +G GL
Sbjct: 233 PP-GYN-NNNLGSAGRFSPIGSGRNAFSSFGLGL 264
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
L K+F+G + D ++L +F YG++ E + D+ TG+ +GF V+ A+ +
Sbjct: 11 LGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI 70
Query: 223 VDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGG 278
+D +DG R + KKA P V H M ++ PS GG+ GG
Sbjct: 71 MDK-HIIDG-----RTVEAKKAVPRDDQ-----QVLKRHASPMHLISPSHGGNGGG 115
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T ++ F +G + + VV+ D T + +G+GFITF + + L
Sbjct: 119 KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLH 178
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
+ +++G++ AV ++T N + G VPN SA+ F
Sbjct: 179 KTFHELNGKMIEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSF 232
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 73 LFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKEP 132
+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L +
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 133 SKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEE 192
++DGRV A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 61 EHRLDGRVIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIEA 111
Query: 193 GPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D ++ K +GF +K E + L T+ G + ++A K+
Sbjct: 112 IELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 163
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D V++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 56 VLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 115
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKI 136
+D + K +G+ FITFK +EP KK+
Sbjct: 116 MDPKSNKRRGFVFITFKE--------EEPVKKV 140
>gi|449273028|gb|EMC82657.1| DAZ-associated protein 1, partial [Columba livia]
Length = 395
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + L
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRK-------IFVGNVPNDMSADKLLAHF 184
+DGR P + +RK + +P++ +L +F
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWVRKDTWCSCDFIINGIPHNCGETELREYF 120
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
+G + E + +D + +P+GF ++ + A+ + GK++ + A+ + +
Sbjct: 121 KKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDS 180
Query: 245 KPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
K P GP S G ++P +A G G P
Sbjct: 181 KSQTP---GPAGASQW---GSRIMPSAANGWAGQP 209
>gi|351697839|gb|EHB00758.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 236
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI+GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++ A+
Sbjct: 14 RKLFIQGLSFETTDESLRSCFEQWGMLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K+ GRV AV S + P ++++KIFVG + D L +F G+
Sbjct: 74 ARLHKVGGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQCGK 130
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
IE + D+ +GK +GFA + + ++ TV+G R A
Sbjct: 131 IEVIEIITDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT LR F G++E +I D+ +
Sbjct: 83 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQCGKIEVIEIITDRGS 142
Query: 109 GKSKGYGFITF 119
GK +G+ F+TF
Sbjct: 143 GKKRGFAFVTF 153
>gi|356560235|ref|XP_003548399.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 351
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 61/100 (61%)
Query: 59 SVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFIT 118
++ S D T K+F+ GL W+T + +R F +GE+ EAVVI DK TGKSKGYGF+T
Sbjct: 106 NINSRQYNDTTSTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGKSKGYGFVT 165
Query: 119 FKHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP 158
FK + AM A + PS IDGR N+A G + N T P
Sbjct: 166 FKDPEAAMNACQNPSPIIDGRRANCNIAAIGANKNRTQAP 205
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 141 TVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQ 200
T T + G + NS D + KIFVG + + D + +F +GEI E + DK
Sbjct: 96 TATQFQMVGGNINSRQYN-DTTSTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKN 154
Query: 201 TGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA-----DNKKAKPM-------- 247
TGK KG+ +K E A A +P +DG++ NC +A N+ P
Sbjct: 155 TGKSKGYGFVTFKDPEAAMNACQNPSPIIDGRRANCNIAAIGANKNRTQAPQHGQSRAAP 214
Query: 248 ----GPDGGGPGNVSMNHGDGMGMVPPSAGGSYGG 278
P GP + +N G P S+ G Y G
Sbjct: 215 GVLASPAFHGPSSTFVNQNIGQYTFPNSSFGIYTG 249
>gi|444509175|gb|ELV09196.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 346
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
RKLFI GL ++TT E LRS F G L + VV+ D T S+G+GF+T ++ A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKHSRGFGFVTSATVEEVDAAMN 73
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHFACYGE 189
K+DGRV AV S + P +++ KIFVG + D L +F YG+
Sbjct: 74 ARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVEKIFVGGIKEDTEEHHLRDYFEQYGK 130
Query: 190 IEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
IE + D+ +GK +GFA + + ++ TV+G R A +K+
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFKTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T K+F+ G+ DT LR F YG++E ++ D+ +
Sbjct: 83 VVEPKRAVSREDSQRPGAHLTVEKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGS 142
Query: 109 GKSKGYGFITF 119
GK +G+ F TF
Sbjct: 143 GKKRGFAFKTF 153
>gi|345323573|ref|XP_001508014.2| PREDICTED: DAZ-associated protein 1-like [Ornithorhynchus anatinus]
Length = 445
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 24/222 (10%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK--HIDGAMLAL 129
KLF+ GL W TT E LRS FS YGE+ + V++ DK T +S+G+GF+ FK + GA+LA
Sbjct: 50 KLFVGGLDWSTTQETLRSYFSQYGEVIDCVIMKDKTTNQSRGFGFVKFKDPNCVGAVLAS 109
Query: 130 KEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLR----------KIFVGNVPNDMSADK 179
+ +DGR P + + KIFVG +P++ +
Sbjct: 110 R--PHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETE 167
Query: 180 LLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
L +F +G + E + +D + +P+GF ++ + A+ + GK++ + A
Sbjct: 168 LREYFKKFGVVSEVVMIYDAEKQRPRGFGFITFEDQQSVDQAVNMHFHDIMGKKVEVKRA 227
Query: 240 D--NKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGP 279
+ + K++P G G + G +VP +A G G P
Sbjct: 228 EPRDSKSQPQGQPG--------TNQWGSRIVPNAANGWAGQP 261
>gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus]
Length = 304
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 64 ADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
A A + K+FI GL WDTT + L+ FS +G++ + + LD TG+S+G+GF+ FK +
Sbjct: 88 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESE 147
Query: 124 GAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAH 183
+ + K++G+V A A T PV +KIFVG + D +K+ +
Sbjct: 148 SVDKVMDQKEHKLNGKVIDPKRAKA----MKTKEPV----KKIFVGGLSPDTPEEKIREY 199
Query: 184 FACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
F +GE+E L D +T K +GF +K E + + V + ++A +K+
Sbjct: 200 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 259
>gi|413954774|gb|AFW87423.1| hypothetical protein ZEAMMB73_842369 [Zea mays]
Length = 203
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
D T K+F+ GL W+T +EGLR+ F YG++ EAVVI D+ATG+SKGYGF+TF+ + A
Sbjct: 35 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFRDPESAR 94
Query: 127 LALKEPSKKIDGRVTVTNLAVAGNSG 152
+A +P IDGR NLA+ G G
Sbjct: 95 MACMDPYPVIDGRRANCNLAILGRPG 120
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
D + K+FVG + + ++ L AHF YG+I E + D+ TG+ KG+ ++ E A+
Sbjct: 35 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFRDPESAR 94
Query: 220 AALVDPIKTVDGKQLNCRLA 239
A +DP +DG++ NC LA
Sbjct: 95 MACMDPYPVIDGRRANCNLA 114
>gi|326936051|ref|XP_003214072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like, partial
[Meleagris gallopavo]
Length = 176
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
Query: 67 DPTQ-RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
+P Q RKLFI GL ++TT E LRS F +G L + VV+ D T +S+G+GF+T+ ++
Sbjct: 16 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEV 75
Query: 126 MLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNP-VDVSLRKIFVGNVPNDMSADKLLAHF 184
A+ K+DGRV AV S + P ++++KIFVG + D L +F
Sbjct: 76 DAAMNARPHKVDGRVVEPKRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 132
Query: 185 ACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALV 223
YG+IE + D+ +GK +GFA + + ++
Sbjct: 133 GQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI 171
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 56 VLESVRSIADADP-------TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKAT 108
V+E R+++ D T +K+F+ G+ DT LR F YG++E ++ D+ +
Sbjct: 90 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDRGS 149
Query: 109 GKSKGYGFITFKHIDGA 125
GK +G+ F+TF D
Sbjct: 150 GKKRGFAFVTFDDHDSV 166
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 162 SLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAA 221
LRK+F+G + + + + L +HF +G + + + D T + +GF Y + E AA
Sbjct: 19 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAA 78
Query: 222 LVDPIKTVDGK 232
+ VDG+
Sbjct: 79 MNARPHKVDGR 89
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 21/191 (10%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK- 120
S+ D+ K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF
Sbjct: 12 SLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTD 71
Query: 121 --HIDGAMLALKEPS--KKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDM 175
+D + K K ID +V A P V+ +KIFVG + +
Sbjct: 72 AASVDKVLAQQKHSVLIKTIDPKVAFPRRA----------QPKMVTRTKKIFVGGLSANT 121
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ + +F +G++++ L FDK T + +GF +++ + +V+ + + ++N
Sbjct: 122 VVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESED-----IVEKVCEIHFHEIN 176
Query: 236 CRLADNKKAKP 246
++ + KKA+P
Sbjct: 177 NKMVECKKAQP 187
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 21/191 (10%)
Query: 62 SIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK- 120
S+ D+ K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF
Sbjct: 12 SLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTD 71
Query: 121 --HIDGAMLALKEPS--KKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDM 175
+D + K K ID +V A P V+ +KIFVG + +
Sbjct: 72 AASVDKVLAQQKHSVLIKTIDPKVAFPRRA----------QPKMVTRTKKIFVGGLSANT 121
Query: 176 SADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLN 235
+ + +F +G++++ L FDK T + +GF +++ + +V+ + + ++N
Sbjct: 122 VVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESED-----IVEKVCEIHFHEIN 176
Query: 236 CRLADNKKAKP 246
++ + KKA+P
Sbjct: 177 NKMVECKKAQP 187
>gi|427777107|gb|JAA54005.1| Putative heteroproteinous nuclear ribonucleoprotein at 27c
[Rhipicephalus pulchellus]
Length = 322
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 67 DPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAM 126
+ Q K+F+ GL W+TT E L + FS +GE+ ++VV+ ++ TG+S+G+GF+TF+
Sbjct: 6 NEEQGKIFVGGLSWETTQESLLNYFSRFGEVVDSVVMCNE-TGRSRGFGFVTFRDPSCVA 64
Query: 127 LALKEPSKKIDGRVT-------------VTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPN 173
L ++DGR G S KIFVG +P
Sbjct: 65 TVLAGGPHQLDGRTVDPKSCNPRSASRPGGGGGPGARGGPRGGGGGKGSTTKIFVGGLPA 124
Query: 174 DMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQ 233
++ L A F+ YG++ E + +D++ + +GF ++T + + GKQ
Sbjct: 125 TVTETDLHAFFSEYGKVTEVLIMYDQEQRRSRGFGFVSFETEDAVNQLTSRRYVEISGKQ 184
Query: 234 LNCRLADNKKAKPMGPDGGGP 254
+ C+ A+ K+++ M GG P
Sbjct: 185 VECKRAEPKESR-MANKGGRP 204
>gi|126290015|ref|XP_001367952.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Monodelphis domestica]
Length = 486
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
KLFI GL T+ GLR F A+G L + VV+++ T +S+ +GF+T+ +++ A A+
Sbjct: 190 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 249
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
+DG AV+ +S ++K+FVG + D++ L+ HF+ +G +E
Sbjct: 250 SPHAVDGNTVELKRAVSRE--DSARPGAHAKVKKLFVGGLKGDVAEGDLVEHFSQFGTVE 307
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLA 239
+ + DKQ+GK +GF +++ + A A V + G ++ + A
Sbjct: 308 KAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKA 355
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 46 LSSAVARHDDVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILD 105
L AV+R D S R A A +KLF+ GL D L FS +G +E+A +I D
Sbjct: 261 LKRAVSRED----SARPGAHAKV--KKLFVGGLKGDVAEGDLVEHFSQFGTVEKAEIIAD 314
Query: 106 KATGKSKGYGFITFKHIDGA 125
K +GK +G+GF+ F+ D A
Sbjct: 315 KQSGKKRGFGFVYFQSHDAA 334
>gi|449267179|gb|EMC78145.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Columba
livia]
Length = 263
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL WDT+ + L+ F+ +GE+ + + +D TG+S+G+GFI FK L++
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
++DGR+ A+A +PV +KIFVG + + + +K+ +F +GEIE
Sbjct: 61 KEHRLDGRLIDPKKAMA-----MKKDPV----KKIFVGGLNPEATEEKIREYFGEFGEIE 111
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKA 244
L D +T K +GF +K + + L V G + ++A K+
Sbjct: 112 AIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPKEV 164
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 45 VLSSAVARHD-DVLESVRSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVI 103
VL R D +++ +++A +K+F+ GL + T E +R F +GE+E +
Sbjct: 57 VLEQKEHRLDGRLIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 116
Query: 104 LDKATGKSKGYGFITFKHIDGAMLALKEPSKKIDGRVTVTNLA 146
+D T K +G+ FITFK D L++ + G +A
Sbjct: 117 MDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVA 159
>gi|79325275|ref|NP_001031725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332659833|gb|AEE85233.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 452
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 45/274 (16%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT E L+ F YG+L EAV++ D+ TG+++G+GFI F
Sbjct: 13 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 72
Query: 120 KH-IDGAMLALKEPSKKIDGRVT--------VTNLAVAGNSGNSTNNPVDVSLRKIFVGN 170
KH IDG + K+ + D +V + + + GN G + +KIFVG
Sbjct: 73 KHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGAR-------TKKIFVGG 125
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
+P+ ++ + +F +G I + + +D T +P+GF + + E L ++
Sbjct: 126 LPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELN 185
Query: 231 GKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVP-PSAGGSYGGPGGHGYPFSGP 289
GK + + A K+ P+ + +G+ G+VP S+ SY F+
Sbjct: 186 GKMVEVKRAVPKELSSTTPNRSPL----IGYGNNYGVVPNRSSANSY---------FNSF 232
Query: 290 PPLGHHLNSSLGGPGQV-PSSMGGVGAGGYGAGL 322
PP G++ N++LG G+ P G +G GL
Sbjct: 233 PP-GYN-NNNLGSAGRFSPIGSGRNAFSSFGLGL 264
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
L K+F+G + D ++L +F YG++ E + D+ TG+ +GF V+ A+ +
Sbjct: 11 LGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI 70
Query: 223 VDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGG 278
+D +DG R + KKA P V H M ++ PS GG+ GG
Sbjct: 71 MDK-HIIDG-----RTVEAKKAVPRDDQ-----QVLKRHASPMHLISPSHGGNGGG 115
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T ++ F +G + + VV+ D T + +G+GFITF + + L
Sbjct: 119 KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLH 178
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
+ +++G++ AV ++T N + G VPN SA+ F
Sbjct: 179 KTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSF 232
>gi|395834195|ref|XP_003790097.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Otolemur garnettii]
Length = 336
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL WDTT + L+ FS +GE+ + + LD TG+S+G+GF+ FK + + +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFACYGEIE 191
K++G+V A A T PV +KIFVG + D +K+ +F +GE+E
Sbjct: 139 KEHKLNGKVIDPKRAKAM----KTKEPV----KKIFVGGLSPDTPEEKIREYFGGFGEVE 190
Query: 192 EGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKK 243
L D +T K +GF +K E + + V + ++A +K+
Sbjct: 191 SIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 242
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 61 RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK 120
+++ +P +K+F+ GL DT E +R F +GE+E + +D T K +G+ FITFK
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 121 HIDGAMLALKEPSKKI 136
+EP KKI
Sbjct: 213 E--------EEPVKKI 220
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+F+ GL W+TT +GL+ FS YGE+ + V++ D T + +G+GF+TF +K
Sbjct: 13 KIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEEVMKN 72
Query: 132 -----PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHFAC 186
+K ID + A + G S N V +K+FVG + + D + + F
Sbjct: 73 GPHTLDNKTIDPKPATMKSATPPSQGGSFNGRV----KKVFVGGIAAGTTEDDVRSFFGQ 128
Query: 187 YGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
+G + E L FDK T + +GF + + + +VD + + Q+N + + KKA+P
Sbjct: 129 FGPVTEIDLKFDKATQRMRGFGFVGFDSED-----VVDRLCQIHFHQINGKTVEVKKAEP 183
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ G+ TT + +RS F +G + E + DKAT + +G+GF+ F D +
Sbjct: 106 KKVFVGGIAAGTTEDDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVVDRLCQ 165
Query: 131 EPSKKIDGRVTVTNLA 146
+I+G+ A
Sbjct: 166 IHFHQINGKTVEVKKA 181
>gi|18416794|ref|NP_567753.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930503|gb|AAL31937.1|AF419605_1 AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|20453245|gb|AAM19861.1| AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|332659832|gb|AEE85232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 455
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 45/274 (16%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ WDT E L+ F YG+L EAV++ D+ TG+++G+GFI F
Sbjct: 16 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 75
Query: 120 KH-IDGAMLALKEPSKKIDGRVT--------VTNLAVAGNSGNSTNNPVDVSLRKIFVGN 170
KH IDG + K+ + D +V + + + GN G + +KIFVG
Sbjct: 76 KHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGAR-------TKKIFVGG 128
Query: 171 VPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVD 230
+P+ ++ + +F +G I + + +D T +P+GF + + E L ++
Sbjct: 129 LPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELN 188
Query: 231 GKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVP-PSAGGSYGGPGGHGYPFSGP 289
GK + + A K+ P+ + +G+ G+VP S+ SY F+
Sbjct: 189 GKMVEVKRAVPKELSSTTPNRSPL----IGYGNNYGVVPNRSSANSY---------FNSF 235
Query: 290 PPLGHHLNSSLGGPGQV-PSSMGGVGAGGYGAGL 322
PP G++ N++LG G+ P G +G GL
Sbjct: 236 PP-GYN-NNNLGSAGRFSPIGSGRNAFSSFGLGL 267
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
L K+F+G + D ++L +F YG++ E + D+ TG+ +GF V+ A+ +
Sbjct: 14 LGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI 73
Query: 223 VDPIKTVDGKQLNCRLADNKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGG 278
+D +DG R + KKA P V H M ++ PS GG+ GG
Sbjct: 74 MDK-HIIDG-----RTVEAKKAVPRDDQ-----QVLKRHASPMHLISPSHGGNGGG 118
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALK 130
+K+F+ GL T ++ F +G + + VV+ D T + +G+GFITF + + L
Sbjct: 122 KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLH 181
Query: 131 EPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKLLAHF 184
+ +++G++ AV ++T N + G VPN SA+ F
Sbjct: 182 KTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSF 235
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGAMLALKE 131
K+FI GL W T+ + LR FS +GE+ E +V+ D T +S+G+GF+TF L +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 132 PSKKIDGRVTVTNLAVAGNSGNSTNNPVDVS-LRKIFVGNVPNDMSADKLLAHFACYGEI 190
P ++D + +A + P V+ +KIFVG + + + + +F +G++
Sbjct: 78 PHHELDSKTIDPKVAFPRRA-----QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 132
Query: 191 EEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLADNKKAKP 246
E+ L FDK T + +GF ++ + +V+ + + ++N ++ + KKA+P
Sbjct: 133 EDAMLMFDKTTNRHRGFGFVTFENED-----VVEKVCEIHFHEINNKMVECKKAQP 183
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 71 RKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHID 123
+K+F+ GL +T E ++ F +G++E+A+++ DK T + +G+GF+TF++ D
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 158
>gi|334188244|ref|NP_001190485.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008158|gb|AED95541.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 453
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 29/197 (14%)
Query: 72 KLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF------------ 119
KLFI G+ W+T+ + LR F ++GE+ EAV++ D+ATG+++G+GF+ F
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 120 KHI-DGAMLA---LKEPSKKIDGRVTVTNLA-----------VAGNSGNST--NNPVDVS 162
KHI DG +L + + D ++++ + V N NS+ +P +
Sbjct: 67 KHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQGSPGPSN 126
Query: 163 LRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAAL 222
+KIFVG + + ++ + +FA +G I + + +D +T +P+GF Y + E L
Sbjct: 127 SKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVL 186
Query: 223 VDPIKTVDGKQLNCRLA 239
++GK + +LA
Sbjct: 187 QKTFHELNGKMVEVKLA 203
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 4 IKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVL-ESVRS 62
+ K ID G +L D N+L D + ++ ++++ AV R D V+ S
Sbjct: 65 LLKHIID--GKILVDSIVYNQLCRSD-----KCISLSEVVEA-KKAVPRDDHVVFNKSNS 116
Query: 63 IADADP---TQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITF 119
P +K+F+ GL T + F+ +G + + VV+ D T + +G+GFI++
Sbjct: 117 SLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISY 176
Query: 120 KHIDGAMLALKEPSKKIDGRVTVTNLAVAGNSG-NSTNNPVDVS 162
+ L++ +++G++ LAV + N+ N ++V+
Sbjct: 177 DSEEAVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVN 220
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,708,621,095
Number of Sequences: 23463169
Number of extensions: 513065938
Number of successful extensions: 6356110
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 36795
Number of HSP's successfully gapped in prelim test: 49501
Number of HSP's that attempted gapping in prelim test: 2895759
Number of HSP's gapped (non-prelim): 905130
length of query: 425
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 280
effective length of database: 8,957,035,862
effective search space: 2507970041360
effective search space used: 2507970041360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)