BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014400
(425 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255540693|ref|XP_002511411.1| protein binding protein, putative [Ricinus communis]
gi|223550526|gb|EEF52013.1| protein binding protein, putative [Ricinus communis]
Length = 381
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/425 (74%), Positives = 342/425 (80%), Gaps = 44/425 (10%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MAIRGVDFKWYDGFFLSMLATSV+IVAINWKRYH CTYPLHIWIVVDYTTVFVFRLLMF+
Sbjct: 1 MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYHHCTYPLHIWIVVDYTTVFVFRLLMFI 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLD GWQQRYARFCGR+ VLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE
Sbjct: 61 DNGLAAGMGLDFGWQQRYARFCGRIAVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWL+FSYCGLLCIACM MGKWLTRRQAH +RAQQGIP+SEYGVL+DM+RVP+W
Sbjct: 121 GQKWGFLIWLVFSYCGLLCIACMCMGKWLTRRQAHLLRAQQGIPISEYGVLVDMVRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQEMRG+GQD AAYHPGLYLT QREAVEALIQELPKFRLK VPTDCSECPICLE
Sbjct: 181 AFEAAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKTVPTDCSECPICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGNE VRGLPCAHNFH
Sbjct: 241 EFHVGNE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLR AD ER A+ VTT RYVRTQPSSQ
Sbjct: 259 VECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLR-ADPERPPAAD-VTTNRYVRTQPSSQ 316
Query: 361 SYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQNRIAMGPFSSTGRVLVSPS 420
SYL+R+QGLL P+ + +D D+ L+ VE+G + AT+ + M P S G +LV S
Sbjct: 317 SYLLRLQGLLRPIRTEDAGSSSDVDVDLEAVEHGREVVATREAMVMEPVSLVGSMLVGQS 376
Query: 421 TQPQH 425
+ PQH
Sbjct: 377 SPPQH 381
>gi|225457054|ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 [Vitis vinifera]
Length = 381
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 318/424 (75%), Positives = 336/424 (79%), Gaps = 44/424 (10%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRY LCTYPLHIWI+VDYTTVFVFRLLMFV
Sbjct: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYDLCTYPLHIWIMVDYTTVFVFRLLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLD GWQQRYARFCGR+VVLSILSLLLYPFLWAWT+IGTLWFT ARDCLPEE
Sbjct: 61 DNGLAAGMGLDFGWQQRYARFCGRIVVLSILSLLLYPFLWAWTVIGTLWFTRARDCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGLLCIACMSMGKW +RRQAH +RAQQGIPVSEYGVL+DMIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWFSRRQAHLLRAQQGIPVSEYGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQEMRG+GQD AAYHPGLYLT QREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGNE VRGLPCAHNFH
Sbjct: 241 EFHVGNE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ECIDEWLRLNVKCPRCRCSVFPNLDLSAL++ R ADSERSSA SVVT TRYVR QP SQ
Sbjct: 259 VECIDEWLRLNVKCPRCRCSVFPNLDLSALTHFR-ADSERSSA-SVVTATRYVRVQPPSQ 316
Query: 361 SYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQNRIAMGPFSSTGRVLVSPS 420
Y++R+QG L PV N ND D AL+ ENGG+ T + P VLV S
Sbjct: 317 GYMLRLQGFLRPVRTENAGAGNDADNALENAENGGLPVVTDDLTNTEPAPFDNGVLVHHS 376
Query: 421 TQPQ 424
T PQ
Sbjct: 377 TPPQ 380
>gi|356513598|ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
Length = 382
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 308/402 (76%), Positives = 325/402 (80%), Gaps = 44/402 (10%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MAIRGVDFKWYDGFFLSMLATSV+IVAINWKRYH CTYPLHIWIVVDYTTVFVFRLLMFV
Sbjct: 1 MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFVFRLLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLD GWQQRYARFCGRVVV SIL LLLYPFLWAWT+IGTLWF+SA++CLPE
Sbjct: 61 DNGLAAGMGLDFGWQQRYARFCGRVVVFSILVLLLYPFLWAWTVIGTLWFSSAKNCLPEV 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
G KWGFLIWLLFSYCGLLCIACMS+GKWLTRRQAH +RAQQGIPVSEYGVL+DMIRVP+W
Sbjct: 121 GTKWGFLIWLLFSYCGLLCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQE RG+GQD AAYHPGLYLT AQREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EF+VGNE VRGLPCAHNFH
Sbjct: 241 EFYVGNE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLR A+ E SSA SVVTTTRYVR QPSSQ
Sbjct: 259 VECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLR-AEPEESSA-SVVTTTRYVRGQPSSQ 316
Query: 361 SYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQN 402
SY +R+QGLL PV D D L+ ENG V TQN
Sbjct: 317 SYRLRLQGLLRPVGAEIAGPVGDIDNVLENAENGSVSIVTQN 358
>gi|224119306|ref|XP_002318038.1| predicted protein [Populus trichocarpa]
gi|222858711|gb|EEE96258.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 306/436 (70%), Positives = 332/436 (76%), Gaps = 56/436 (12%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSV-----------IIVAINWKRYHLCTYPLHIWIVVDYT 49
MA+RG+DFKWYDGFFLSMLAT + IIVAINW+RYH+CTYPLHIWI+VDYT
Sbjct: 1 MAMRGIDFKWYDGFFLSMLATKIVCSFFNNVTHRIIVAINWRRYHICTYPLHIWIMVDYT 60
Query: 50 TVFVFRLLMFVDNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLW 109
TVFVFRLLMF+DNGLA+GMGLD G QQRYARFCGR+VVLSILSLLLYPFLWAWTI GTLW
Sbjct: 61 TVFVFRLLMFIDNGLAAGMGLDFGRQQRYARFCGRIVVLSILSLLLYPFLWAWTITGTLW 120
Query: 110 FTSARDCLPEEGQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYG 169
FT ARDCLPEEGQKWGFLIWLLFSYCGL+ IAC+S+GKW RRQAH +RAQQGIP+SEYG
Sbjct: 121 FTRARDCLPEEGQKWGFLIWLLFSYCGLIGIACISVGKWRVRRQAHHLRAQQGIPISEYG 180
Query: 170 VLLDMIRVPEWAFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVP 229
VL+D+IRVP+WAFEAAGQEMRG+GQD AAY PGLYLT QREAVEALIQELPKFRLKAVP
Sbjct: 181 VLVDLIRVPDWAFEAAGQEMRGMGQDAAAYQPGLYLTPTQREAVEALIQELPKFRLKAVP 240
Query: 230 TDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQ 289
TDCSEC ICLEEF+VGNE
Sbjct: 241 TDCSECLICLEEFYVGNE------------------------------------------ 258
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTT 349
VRGLPCAHNFH+ECIDEWLRLNVKCPRCRCSVFPNLDLSA+SNLR ADSERS A+ VTT
Sbjct: 259 VRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSAISNLR-ADSERSPAT--VTT 315
Query: 350 TRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQNRIAMGPF 409
RYVRT PSS SYL+R+QGLL PV GN P D DI ++ ENG AT R
Sbjct: 316 NRYVRTVPSSHSYLLRLQGLLWPVQSGNAGDPTDADIDVEAAENGSAHMATGERTGTESV 375
Query: 410 SSTGRVLVSPSTQPQH 425
SS G LV STQ H
Sbjct: 376 SSAGLALVGQSTQTHH 391
>gi|357477371|ref|XP_003608971.1| RING finger protein [Medicago truncatula]
gi|355510026|gb|AES91168.1| RING finger protein [Medicago truncatula]
Length = 365
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/377 (77%), Positives = 307/377 (81%), Gaps = 44/377 (11%)
Query: 18 MLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLDLGWQQR 77
MLATSV+IVAINWKRYH CTYPLHIWIVVDYT VFVFRLLMFVDNG A+GMGLD GWQQR
Sbjct: 1 MLATSVVIVAINWKRYHSCTYPLHIWIVVDYTAVFVFRLLMFVDNGFAAGMGLDFGWQQR 60
Query: 78 YARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEEGQKWGFLIWLLFSYCGL 137
YARFCGRVVVLSIL LLLYPFLWAWTIIGT+WF+SA+ CLPEEGQKWGFLIWLLFSYCGL
Sbjct: 61 YARFCGRVVVLSILGLLLYPFLWAWTIIGTMWFSSAKSCLPEEGQKWGFLIWLLFSYCGL 120
Query: 138 LCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQEMRGIGQDTA 197
LCIACMS+GKWLTRRQAH +RAQQGIP+SEYG+L+DMIRVP+WAFEAAGQE RG+GQDTA
Sbjct: 121 LCIACMSVGKWLTRRQAHLVRAQQGIPLSEYGILVDMIRVPDWAFEAAGQETRGMGQDTA 180
Query: 198 AYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPY 257
+YHPGLYLT AQREAVEALIQELPKFRLKAVPTDCSECPICLEEF VGNE
Sbjct: 181 SYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFRVGNE---------- 230
Query: 258 GFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRC 317
VRGLPCAHNFH+ECIDEWLRLNVKCPRC
Sbjct: 231 --------------------------------VRGLPCAHNFHVECIDEWLRLNVKCPRC 258
Query: 318 RCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGN 377
RCSVFPNLDLSALSNLR DSERSS SVVTTTRYVR QPSSQSYL+R+QGLL PV
Sbjct: 259 RCSVFPNLDLSALSNLR-PDSERSS-DSVVTTTRYVRGQPSSQSYLLRLQGLLRPVRTEI 316
Query: 378 TRLPNDTDIALQTVENG 394
DTD ALQ ENG
Sbjct: 317 AGPVGDTDNALQNAENG 333
>gi|356562736|ref|XP_003549625.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
Length = 383
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/412 (73%), Positives = 328/412 (79%), Gaps = 44/412 (10%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MAIRGVDFKWYDGFFL MLATSV+IVAINWKRYH CTYPLHIWIVVDYTTVFVFR+LMFV
Sbjct: 1 MAIRGVDFKWYDGFFLFMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFVFRVLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGL++GMGLD GWQQRYARFCGRVVVLSIL LLLYPFLWAWT+IGTLWF+SA++CLPE
Sbjct: 61 DNGLSAGMGLDFGWQQRYARFCGRVVVLSILVLLLYPFLWAWTVIGTLWFSSAKNCLPEV 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
G+KWGFLIWLLFSYCGL CIACMS+GKWLTRRQAH +RAQQGIPVSEYGVL+DMIRVP+W
Sbjct: 121 GKKWGFLIWLLFSYCGLFCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQE RG+GQD AAYHPGLYLT AQREAVEALI ELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALILELPKFRLKAVPTDCSECPICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EF+VGNE VRGLPCAHNFH
Sbjct: 241 EFYVGNE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ECIDEWLRLNVKCPRCRCSVFPNLDLSALS+LR A+ E+ SA SVVTT RYVR QPSS
Sbjct: 259 VECIDEWLRLNVKCPRCRCSVFPNLDLSALSSLR-AEPEQFSA-SVVTTARYVRGQPSSL 316
Query: 361 SYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQNRIAMGPFSST 412
SY +R+QGLL PV D D AL+ +NG V TQN + G +S+
Sbjct: 317 SYRLRLQGLLCPVRAEIAGPVGDIDNALKNAQNGVVSIVTQNASSSGDQASS 368
>gi|449440682|ref|XP_004138113.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
gi|449518937|ref|XP_004166492.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
Length = 377
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 289/402 (71%), Positives = 314/402 (78%), Gaps = 46/402 (11%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MA RGVDFKWYDGFFLSMLATSV+IV+INWKRYH C +PLHIWIVVDYTTVFVFRLLMFV
Sbjct: 1 MAARGVDFKWYDGFFLSMLATSVVIVSINWKRYHTCVHPLHIWIVVDYTTVFVFRLLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLD GWQQRYARFCGR+VVLS+L++LLYPFLWAWT IGT+WF A CLPE+
Sbjct: 61 DNGLAAGMGLDFGWQQRYARFCGRIVVLSVLAVLLYPFLWAWTAIGTIWFREAHKCLPEQ 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYC L+CIACMS+GKWLTRRQA RAQQGIPVSEYGVL+DM+RVP+W
Sbjct: 121 GQKWGFLIWLLFSYCALVCIACMSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMVRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQE R +GQD AAYHPGLYLT AQREAVEALI+ELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGNE VRGLPCAHNFH
Sbjct: 241 EFHVGNE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ CIDEWLRLNVKCPRCRCSVFPNLDLSALSNLR+ D++R SA SV+T RYV +QPSSQ
Sbjct: 259 VGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRS-DTDRPSA-SVLTANRYVGSQPSSQ 316
Query: 361 SYLVRMQGLLSPVHMGNTRLPNDTD--IALQTVENGGVLSAT 400
SYLVR+QGLL PV D AL+ ENG T
Sbjct: 317 SYLVRLQGLLRPVRTEENDAHGDLGPASALEAAENGSAHEQT 358
>gi|224133512|ref|XP_002321588.1| predicted protein [Populus trichocarpa]
gi|222868584|gb|EEF05715.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 291/374 (77%), Positives = 309/374 (82%), Gaps = 45/374 (12%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MAIRGVDFKWYDGFFLSMLATS IIVAINWKRY LCTYPLHIWI+VDYTTVFVFRLLMF+
Sbjct: 1 MAIRGVDFKWYDGFFLSMLATSAIIVAINWKRYRLCTYPLHIWIMVDYTTVFVFRLLMFI 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLD GWQQRYARFCGR+VVLSILSLLLYPFLWAWTIIGTLWFT+ARDCLPEE
Sbjct: 61 DNGLAAGMGLDFGWQQRYARFCGRIVVLSILSLLLYPFLWAWTIIGTLWFTNARDCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGL+ IAC+S+GKW RRQAH +RAQQGIP+SEYGVL+D+IRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLIGIACISVGKWWVRRQAHHLRAQQGIPISEYGVLVDLIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQEMRG+GQD AAY PGLYLT QREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGQEMRGMGQDAAAYQPGLYLTPTQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EF+VGNE VRGLPCAHNFH
Sbjct: 241 EFYVGNE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL ADSERS A+ TT RYVRT P SQ
Sbjct: 259 VECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL-LADSERSPATP--TTNRYVRTVPFSQ 315
Query: 361 SYLVRMQGLLSPVH 374
YL+RMQGLL PV
Sbjct: 316 IYLLRMQGLLWPVR 329
>gi|219886093|gb|ACL53421.1| unknown [Zea mays]
Length = 374
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 284/412 (68%), Positives = 317/412 (76%), Gaps = 62/412 (15%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
M +RGVDFKWYDGFFLSMLATSVIIV+INWKRY LC +PLHIWIVVDYTTVF+FRLLMFV
Sbjct: 1 MPMRGVDFKWYDGFFLSMLATSVIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLDLGWQQRYARFCGR++VLS+L LLYPFLW WT+IGTLWF++AR CLPEE
Sbjct: 61 DNGLAAGMGLDLGWQQRYARFCGRIIVLSVLVPLLYPFLWVWTVIGTLWFSTARGCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGL CIAC+++GKWL RR A RAQQGIPVSE+GVL+DMIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLACIACVAIGKWLHRRHALQQRAQQGIPVSEHGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEA G EMR +GQDT AYHPGLYLT AQREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAVGLEMR-VGQDT-AYHPGLYLTDAQREAVEALIQELPKFRLKAVPTDCSECPICLE 238
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGNE VRGLPCAHNFH
Sbjct: 239 EFHVGNE------------------------------------------VRGLPCAHNFH 256
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTA---DSERSSASSVVT---TTRYVR 354
+ECID+WLRLNVKCPRCRCSVFPNLDLSAL+NLR+ D +SAS+V T TRYVR
Sbjct: 257 VECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRSTSEPDHPSASASNVTTATAATRYVR 316
Query: 355 TQPSSQSYLVRMQG-LLSPVH-----------MGNTRLPNDTDIALQTVENG 394
+QP+ QSYLVR+QG LL PV +GN+RL ++ V++G
Sbjct: 317 SQPAGQSYLVRLQGLLLRPVRHDSVESDGEPAVGNSRLVGTEELPSILVDDG 368
>gi|242057653|ref|XP_002457972.1| hypothetical protein SORBIDRAFT_03g024030 [Sorghum bicolor]
gi|241929947|gb|EES03092.1| hypothetical protein SORBIDRAFT_03g024030 [Sorghum bicolor]
Length = 374
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 286/412 (69%), Positives = 317/412 (76%), Gaps = 62/412 (15%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
M +RGVDFKWYDGFFLSMLATSVIIV+INWKRY LC +PLHIWIVVDYTTVF+FRLLMF+
Sbjct: 1 MPMRGVDFKWYDGFFLSMLATSVIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFL 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLDLGWQQRYARFCGR+VVLS+L LLLYPFLW WT+IGTLWF++AR CLPEE
Sbjct: 61 DNGLAAGMGLDLGWQQRYARFCGRIVVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGL CIAC+++GKWL RR A RAQQGIPVSEYGVL+DMIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLACIACVAIGKWLNRRHALQQRAQQGIPVSEYGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEA G EMR +GQDT AYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAVGLEMR-VGQDT-AYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 238
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGNE VRGLPCAHNFH
Sbjct: 239 EFHVGNE------------------------------------------VRGLPCAHNFH 256
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTA---DSERSSASSVVT---TTRYVR 354
+ECID+WLRLNVKCPRCRCSVFPNLDLSAL+NLR+ D +SAS V T TRYVR
Sbjct: 257 VECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRSTSEPDHPSASASDVTTATAATRYVR 316
Query: 355 TQPSSQSYLVRMQG-LLSPVH-----------MGNTRLPNDTDIALQTVENG 394
+QP+ QSYLVR+QG LL PV + N+RL ++ V++G
Sbjct: 317 SQPAGQSYLVRLQGLLLRPVRHESVESDGEPAVANSRLVGTEELPSIVVDDG 368
>gi|226500604|ref|NP_001150413.1| LOC100284043 [Zea mays]
gi|195639078|gb|ACG39007.1| protein binding protein [Zea mays]
gi|219888467|gb|ACL54608.1| unknown [Zea mays]
gi|414881944|tpg|DAA59075.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 374
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 285/412 (69%), Positives = 318/412 (77%), Gaps = 62/412 (15%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
M +RGVDFKWYDGFFLSMLATSVIIV+INWKRY LC +PLHIWIVVDYTTVF+FRLLMFV
Sbjct: 1 MPMRGVDFKWYDGFFLSMLATSVIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLDLGWQQRYARFCGR++VLS+L LLLYPFLW WT+IGTLWF++AR CLPEE
Sbjct: 61 DNGLAAGMGLDLGWQQRYARFCGRIIVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGL CIAC+++GKWL RR A RAQQGIPVSE+GVL+DMIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLACIACVAIGKWLHRRHALQQRAQQGIPVSEHGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEA G EMR +GQDT AYHPGLYLT AQREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAVGLEMR-VGQDT-AYHPGLYLTDAQREAVEALIQELPKFRLKAVPTDCSECPICLE 238
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGNE VRGLPCAHNFH
Sbjct: 239 EFHVGNE------------------------------------------VRGLPCAHNFH 256
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTA---DSERSSASSVVT---TTRYVR 354
+ECID+WLRLNVKCPRCRCSVFPNLDLSAL+NLR+ D +SAS+V T TRYVR
Sbjct: 257 VECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRSTSEPDHPSASASNVTTATAATRYVR 316
Query: 355 TQPSSQSYLVRMQG-LLSPVH-----------MGNTRLPNDTDIALQTVENG 394
+QP+ QSYLVR+QG LL PV +GN+RL ++ V++G
Sbjct: 317 SQPAGQSYLVRLQGLLLRPVRHDSVESDGEPAVGNSRLVGTEELPSILVDDG 368
>gi|356516680|ref|XP_003527021.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
Length = 378
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/402 (67%), Positives = 306/402 (76%), Gaps = 46/402 (11%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MAIRGV+FKW+DG FLSMLATS+ IVAINWKRY CT+PLHIW VVDY VF FRLLMFV
Sbjct: 1 MAIRGVNFKWFDGLFLSMLATSIAIVAINWKRYQSCTHPLHIWTVVDYAAVFTFRLLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLASGMGLD GW QRYARFCGRVVVLSIL+LLLYPFLWAWTI+GTLWF++ + CLP
Sbjct: 61 DNGLASGMGLDFGWPQRYARFCGRVVVLSILALLLYPFLWAWTIVGTLWFSNTKICLPGG 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGLLCIAC++MGKWL RRQA + AQ+GIPVS +GVL++MIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLLCIACLAMGKWLKRRQARMLGAQEGIPVSAFGVLIEMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQE R + QD AAYHPGLYLT AQREAVEALIQEL FRL AVPT+CSEC ICLE
Sbjct: 181 AFEAAGQETRSMAQD-AAYHPGLYLTPAQREAVEALIQELSSFRLTAVPTNCSECLICLE 239
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGN QVRGLPCAHNFH
Sbjct: 240 EFHVGN------------------------------------------QVRGLPCAHNFH 257
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ECIDEWLRLNV CPRCRCSVFPNLDLSALSN+R+ +SE+SSA++V T+R + Q SSQ
Sbjct: 258 VECIDEWLRLNVNCPRCRCSVFPNLDLSALSNIRS-ESEQSSATAV--TSRDMTGQTSSQ 314
Query: 361 SYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQN 402
SYL+R+QG L PV + +TD AL+ ENG V T N
Sbjct: 315 SYLLRLQGHLHPVCVDIAGPAGETDNALENAENGVVPVVTLN 356
>gi|30692957|ref|NP_190382.2| E3 ubiquitin-protein ligase SIS3 [Arabidopsis thaliana]
gi|302595901|sp|Q8GYT9.2|SIS3_ARATH RecName: Full=E3 ubiquitin-protein ligase SIS3; AltName:
Full=Protein SUGAR INSENSITIVE 3; Flags: Precursor
gi|332644833|gb|AEE78354.1| E3 ubiquitin-protein ligase SIS3 [Arabidopsis thaliana]
Length = 358
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/397 (68%), Positives = 308/397 (77%), Gaps = 52/397 (13%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MA+RGVDFKWYDGFFLSMLATSVIIVA+NW RY C YPLHIWIVVDYTTVF+FR+ MFV
Sbjct: 1 MAMRGVDFKWYDGFFLSMLATSVIIVAVNWNRYRACEYPLHIWIVVDYTTVFIFRVFMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLASG+GLD G QQR A FCGRVVVLS+LSLLLYPFLWAWT+IGT WFT ++ CLPEE
Sbjct: 61 DNGLASGLGLDFGSQQRNAMFCGRVVVLSVLSLLLYPFLWAWTVIGTQWFTKSKTCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWL+FSYCGLLCIA + +GKWLTRRQ H +RAQQGIP+SE+G+L+DMIRVP+W
Sbjct: 121 GQKWGFLIWLMFSYCGLLCIAFICVGKWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQEMRGI QD A YHPGLYLT AQ EAVEALIQELPKFRLKAVP DC EC ICLE
Sbjct: 181 AFEAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECLICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFH+G+E VRGLPCAHNFH
Sbjct: 241 EFHIGHE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTT-TRYVRTQPSS 359
+ECID+WLRLNVKCPRCRCSVFP+LDLSALSNL+++ +E+ S + T+ RY+R+QP S
Sbjct: 259 VECIDQWLRLNVKCPRCRCSVFPDLDLSALSNLQSSGTEQHSQVNTETSEARYIRSQPQS 318
Query: 360 QSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGV 396
+SY +R+Q L+ PVH TD AL+T ENGGV
Sbjct: 319 ESYFLRVQSLIHPVH---------TDTALETAENGGV 346
>gi|297819412|ref|XP_002877589.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323427|gb|EFH53848.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 358
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 272/397 (68%), Positives = 308/397 (77%), Gaps = 52/397 (13%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MA+RGVDFKWYDGFFLSMLATSVIIVA+NW RY C YPLHIWIVVDYTTVF+FR+ MFV
Sbjct: 1 MAMRGVDFKWYDGFFLSMLATSVIIVAVNWNRYRACEYPLHIWIVVDYTTVFLFRVFMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+G+GLD G QQR A FCGRVVVLS+LSLLLYPFLWAWT+IGT WFT A+ CLPEE
Sbjct: 61 DNGLAAGLGLDFGSQQRNAMFCGRVVVLSVLSLLLYPFLWAWTVIGTQWFTRAKTCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWL+FSYCGLLCIA + +GKWLTRRQ H +RAQQGIP+SE+G+L+DMIRVP+W
Sbjct: 121 GQKWGFLIWLMFSYCGLLCIAFICVGKWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQEMRGI QD A YHPGLYLT AQ EAVEALIQELPKFRLKAVP DC EC ICLE
Sbjct: 181 AFEAAGQEMRGISQDAATYHPGLYLTPAQAEAVEALIQELPKFRLKAVPDDCGECLICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFH+G+E VRGLPCAHNFH
Sbjct: 241 EFHIGHE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTT-TRYVRTQPSS 359
+ECID+WLRLNVKCPRCRCSVFP+LDLSALSNL+++ +E+ S + TT RY+R+QP S
Sbjct: 259 VECIDQWLRLNVKCPRCRCSVFPDLDLSALSNLQSSGTEQPSQVNTETTEARYIRSQPQS 318
Query: 360 QSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGV 396
+SY +R+Q L+ PVH TD AL+T ENGGV
Sbjct: 319 ESYFLRVQSLIHPVH---------TDTALETAENGGV 346
>gi|115462059|ref|NP_001054629.1| Os05g0145000 [Oryza sativa Japonica Group]
gi|51038194|gb|AAT93997.1| unknow protein [Oryza sativa Japonica Group]
gi|113578180|dbj|BAF16543.1| Os05g0145000 [Oryza sativa Japonica Group]
gi|215706903|dbj|BAG93363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630174|gb|EEE62306.1| hypothetical protein OsJ_17095 [Oryza sativa Japonica Group]
Length = 386
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/366 (74%), Positives = 300/366 (81%), Gaps = 47/366 (12%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MA+RGVDFKWYDGFFLSMLATS+IIV+INWKRY LC +PLHIWIVVDYTTVF+FRLLMFV
Sbjct: 1 MAMRGVDFKWYDGFFLSMLATSLIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLDLGWQQRYARFCGR+VVLS+L LLLYPFLW WT+IGTLWF++AR CLPEE
Sbjct: 61 DNGLAAGMGLDLGWQQRYARFCGRIVVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGL CIAC+++GKWL+RR A RAQQGIPVSEYGVL+DMIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLACIACVAVGKWLSRRHALQQRAQQGIPVSEYGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEA G EMRG+GQDT AYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAVGLEMRGMGQDT-AYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 239
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGNE VRGLPCAHNFH
Sbjct: 240 EFHVGNE------------------------------------------VRGLPCAHNFH 257
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLR-TADSERSSASSVVTTT--RYVR-TQ 356
+ECID+WLRLNVKCPRCRCSVFPNLDLSAL+NLR +++ +R SAS V T RYVR +Q
Sbjct: 258 VECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRPSSEPDRPSASEVTAATMARYVRSSQ 317
Query: 357 PSSQSY 362
P+ QSY
Sbjct: 318 PAGQSY 323
>gi|26449875|dbj|BAC42060.1| unknown protein [Arabidopsis thaliana]
Length = 358
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/397 (68%), Positives = 307/397 (77%), Gaps = 52/397 (13%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MA+RGVDFKWYDGFFLSMLATSVIIVA+NW RY C YPLHIWIVVDYTTVF+FR+ MFV
Sbjct: 1 MAMRGVDFKWYDGFFLSMLATSVIIVAVNWNRYRACEYPLHIWIVVDYTTVFIFRVFMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLASG+GLD G QQR A FCGRVVVLS+LSLLLYPFLWAWT+IGT WFT ++ CLPEE
Sbjct: 61 DNGLASGLGLDFGSQQRNAMFCGRVVVLSVLSLLLYPFLWAWTVIGTQWFTKSKTCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWL+FSYCGLLCIA + +GKWLTRRQ H +RAQQGIP+SE+G+L+DMIRVP+W
Sbjct: 121 GQKWGFLIWLMFSYCGLLCIAFICVGKWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQEMRGI QD A YHPGLYLT AQ EAVEALIQELPKFRLKAVP DC EC ICLE
Sbjct: 181 AFEAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECLICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFH+G+E VRGLPCAHNFH
Sbjct: 241 EFHIGHE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTT-TRYVRTQPSS 359
+ECID+WLRLNVKCPRCRCSVFP+LDLSALSNL+++ +E+ S + T+ RY+R+QP S
Sbjct: 259 VECIDQWLRLNVKCPRCRCSVFPDLDLSALSNLQSSGTEQHSQVNTETSEARYIRSQPQS 318
Query: 360 QSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGV 396
+SY +R+Q L+ PVH D AL+T ENGGV
Sbjct: 319 ESYFLRVQSLIHPVH---------ADTALETAENGGV 346
>gi|449469529|ref|XP_004152472.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like isoform 1 [Cucumis
sativus]
Length = 348
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/395 (69%), Positives = 302/395 (76%), Gaps = 56/395 (14%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MAIRGVDFKWYDGFFLSMLATS+IIV INW+RY+ CTYPLHIWIVVDYT+VF FRLL+F+
Sbjct: 1 MAIRGVDFKWYDGFFLSMLATSIIIVTINWRRYNTCTYPLHIWIVVDYTSVFAFRLLLFI 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DN L++GMGLD GWQQRYARFCGRVVVLSILSLLLYPFL AWT+IGTLWF A+DCLPEE
Sbjct: 61 DNALSAGMGLDFGWQQRYARFCGRVVVLSILSLLLYPFLCAWTVIGTLWFRDAKDCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYC LLCIACMS+GKWL RRQAH RAQQGIPVSEYGVL+DMIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCALLCIACMSVGKWLVRRQAHLFRAQQGIPVSEYGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
A+EAAG E R IGQD YHPGL+LT+AQREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AYEAAGLETRAIGQDATGYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGNE VRG+PCAHNFH
Sbjct: 241 EFHVGNE------------------------------------------VRGMPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ECIDEWLRLNVKCPRCR SVFPNLDLSALSNL + D+E++S ++ VT TQPSS
Sbjct: 259 VECIDEWLRLNVKCPRCRSSVFPNLDLSALSNLHS-DTEQTSHNAFVT------TQPSSL 311
Query: 361 SYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGG 395
S +P H +T TD AL +ENG
Sbjct: 312 SR-------STPTHAAHTENSLQTDTALDALENGN 339
>gi|357130197|ref|XP_003566737.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Brachypodium
distachyon]
Length = 382
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 273/383 (71%), Positives = 298/383 (77%), Gaps = 56/383 (14%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MA+RGVDFKWYDGFFLSMLATSVIIV+INW+RY LC +PLHIWIVVDYTTVFVFRLLMF+
Sbjct: 1 MAMRGVDFKWYDGFFLSMLATSVIIVSINWRRYRLCAHPLHIWIVVDYTTVFVFRLLMFL 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLDLGWQQRY RFCGR++VLS+L LLLYPFLW WT+IGTLWF++AR CLPEE
Sbjct: 61 DNGLAAGMGLDLGWQQRYTRFCGRILVLSLLILLLYPFLWVWTVIGTLWFSTARGCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGL CIAC+++GKWL RR A +RAQQGIPVSEYGVLLDMIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLACIACVAVGKWLNRRLALQLRAQQGIPVSEYGVLLDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEA G E+RG+GQDT AYHPGLYLT AQREAVEALIQELPKF LKAVPTDCSECPICLE
Sbjct: 181 AFEAVGLELRGMGQDT-AYHPGLYLTTAQREAVEALIQELPKFMLKAVPTDCSECPICLE 239
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EF VGNE VRGLPCAHNFH
Sbjct: 240 EFRVGNE------------------------------------------VRGLPCAHNFH 257
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRT------ADSERSSASSVVTTT---- 350
+ECID+WLRLNVKCPRCRCSVFPNLDLSAL+ LR A S S+S V TT
Sbjct: 258 VECIDQWLRLNVKCPRCRCSVFPNLDLSALNGLRPSSETDHAPSGTGSSSEVTGTTTAAV 317
Query: 351 --RYVRT-QPSSQSYLVRMQGLL 370
RYVR QPS Q LV++QGLL
Sbjct: 318 ASRYVRAQQPSGQRCLVQLQGLL 340
>gi|301133572|gb|ADK63408.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 355
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/396 (66%), Positives = 304/396 (76%), Gaps = 53/396 (13%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MA+RGVDFKWYDGFFLSMLATSVIIVAINWKRY C YPLHIWIVVDYTTVF+FR+ MFV
Sbjct: 1 MAMRGVDFKWYDGFFLSMLATSVIIVAINWKRYSSCDYPLHIWIVVDYTTVFIFRVFMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+G+GLD G QQR F GRVVVLS+LSLLLYPFLWAWT+IGT+WFT A+ CLPE+
Sbjct: 61 DNGLAAGLGLDFGSQQRNIGFWGRVVVLSVLSLLLYPFLWAWTVIGTIWFTKAKSCLPED 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWL+FSYCGLLCIAC+ +GKWL RRQ HS+RAQQGIP SE+G+++DMIRVP+W
Sbjct: 121 GQKWGFLIWLMFSYCGLLCIACICVGKWLARRQVHSLRAQQGIPSSEFGIVVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQEMR + QD A YHPGLYLT AQ EAVEALIQELPKFRLKAVP DC EC ICLE
Sbjct: 181 AFEAAGQEMRSMSQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECLICLE 240
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EF +G+E VRGLPCAHNFH
Sbjct: 241 EFQIGHE------------------------------------------VRGLPCAHNFH 258
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ECID+WLRLNVKCPRCR SVFP+LDLSALSNL++++++ S + T RY+R+QP S+
Sbjct: 259 VECIDQWLRLNVKCPRCRSSVFPDLDLSALSNLQSSEAQHPSQGN--TEARYIRSQPQSE 316
Query: 361 SYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGV 396
SY +R+Q ++ PVH TDIAL+T EN GV
Sbjct: 317 SYFLRLQPVIHPVH---------TDIALETAENVGV 343
>gi|413948218|gb|AFW80867.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 340
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 269/378 (71%), Positives = 295/378 (78%), Gaps = 50/378 (13%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
M +RGVDFKWYDGFFLSMLATSVIIV+INWKRYHLC +PLHIWIVV VF+FRLLMF+
Sbjct: 1 MPMRGVDFKWYDGFFLSMLATSVIIVSINWKRYHLCAHPLHIWIVVPPNVVFIFRLLMFL 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLDLGWQQRYARFCGR++VLS+L LLLYPFLW WT+IGTLWF++AR CLPEE
Sbjct: 61 DNGLAAGMGLDLGWQQRYARFCGRIIVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGL CIA +++GKWL RR A RAQQGIPVSEYGVL+DMIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLACIAFVAIGKWLNRRIALQQRAQQGIPVSEYGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEA G EMR +GQDT AYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSEC ICLE
Sbjct: 181 AFEAVGLEMR-VGQDT-AYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECLICLE 238
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGNE VRGLPCAHNFH
Sbjct: 239 EFHVGNE------------------------------------------VRGLPCAHNFH 256
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTA---DSERSSASSVVT---TTRYVR 354
+ECID+WLRLNVKCPRCRCSVFPNLDLSAL+NLR+ D AS V T TRYV
Sbjct: 257 VECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRSTSEPDHPSVGASDVTTATAATRYVS 316
Query: 355 TQPSSQSYLVRMQGLLSP 372
+QP+ QSYLVR+ G +P
Sbjct: 317 SQPAGQSYLVRLTGDAAP 334
>gi|218196079|gb|EEC78506.1| hypothetical protein OsI_18434 [Oryza sativa Indica Group]
Length = 394
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/356 (73%), Positives = 290/356 (81%), Gaps = 47/356 (13%)
Query: 11 YDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGL 70
YDGFFLSMLATS+IIV+INWKRY LC +PLHIWIVVDYTTVF+FRLLMFVDNGLA+GMGL
Sbjct: 21 YDGFFLSMLATSLIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFVDNGLAAGMGL 80
Query: 71 DLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEEGQKWGFLIWL 130
DLGWQQRYARFCGR++VLS+L LLLYPFLW WT+IGTLWF++AR CLPEEGQKWGFLIWL
Sbjct: 81 DLGWQQRYARFCGRIIVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEEGQKWGFLIWL 140
Query: 131 LFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQEMR 190
LFSYCGL CIAC+++GKWL+RR A RAQQGIPVSEYGVL+DMIRVP+WAFEA G EMR
Sbjct: 141 LFSYCGLACIACVAVGKWLSRRHALQQRAQQGIPVSEYGVLVDMIRVPDWAFEAVGLEMR 200
Query: 191 GIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQA 250
G+GQDT AYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE
Sbjct: 201 GMGQDT-AYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE--- 256
Query: 251 DVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRL 310
VRGLPCAHNFH+ECID+WLRL
Sbjct: 257 ---------------------------------------VRGLPCAHNFHVECIDQWLRL 277
Query: 311 NVKCPRCRCSVFPNLDLSALSNLR-TADSERSSASSVVTTT--RYVR-TQPSSQSY 362
NVKCPRCRCSVFPNLDLSAL+NLR +++ +R SAS V T RYVR +QP+ QSY
Sbjct: 278 NVKCPRCRCSVFPNLDLSALNNLRPSSEPDRPSASEVTAATMARYVRSSQPAGQSY 333
>gi|297733794|emb|CBI15041.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/247 (93%), Positives = 239/247 (96%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRY LCTYPLHIWI+VDYTTVFVFRLLMFV
Sbjct: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYDLCTYPLHIWIMVDYTTVFVFRLLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLA+GMGLD GWQQRYARFCGR+VVLSILSLLLYPFLWAWT+IGTLWFT ARDCLPEE
Sbjct: 61 DNGLAAGMGLDFGWQQRYARFCGRIVVLSILSLLLYPFLWAWTVIGTLWFTRARDCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGLLCIACMSMGKW +RRQAH +RAQQGIPVSEYGVL+DMIRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWFSRRQAHLLRAQQGIPVSEYGVLVDMIRVPDW 180
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
AFEAAGQEMRG+GQD AAYHPGLYLT QREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181 AFEAAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
Query: 241 EFHVGNE 247
EFHVGNE
Sbjct: 241 EFHVGNE 247
>gi|356507234|ref|XP_003522374.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
Length = 339
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/402 (60%), Positives = 273/402 (67%), Gaps = 85/402 (21%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
MAIRGV+FKW+DGFFLSMLATS+ IVAINWKRY CT+PLHIW VVDY VF FRLLMFV
Sbjct: 1 MAIRGVNFKWFDGFFLSMLATSIAIVAINWKRYQSCTHPLHIWTVVDYAAVFTFRLLMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNGLASGMGLD GW QRYARFCGRVVVLSIL+LLLYPFLWAWTIIGTLWF++ + CLP
Sbjct: 61 DNGLASGMGLDFGWPQRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFSNTKICLPGG 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGLLCIAC++M KWL RRQA + AQ+GIPVS +G
Sbjct: 121 GQKWGFLIWLLFSYCGLLCIACLAMRKWLKRRQARMLGAQEGIPVSAFG----------- 169
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
REAVEALIQELP FRL AVPT+CSEC ICLE
Sbjct: 170 -----------------------------REAVEALIQELPSFRLTAVPTNCSECLICLE 200
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
EFHVGN QVRGLPCAHNFH
Sbjct: 201 EFHVGN------------------------------------------QVRGLPCAHNFH 218
Query: 301 IECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQ 360
+ECIDEWLRLNV CPRCRCSVFPNLDLSALSN+R+ +SE+SSA++V T+R + Q SSQ
Sbjct: 219 VECIDEWLRLNVNCPRCRCSVFPNLDLSALSNIRS-ESEQSSATAV--TSRDMTGQTSSQ 275
Query: 361 SYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQN 402
SYL+R+QG L PV + +TD AL+ ENG V TQN
Sbjct: 276 SYLLRLQGPLHPVCVDFAGPAGETDNALENAENGVVPVVTQN 317
>gi|449469531|ref|XP_004152473.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like isoform 2 [Cucumis
sativus]
Length = 281
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/328 (67%), Positives = 239/328 (72%), Gaps = 56/328 (17%)
Query: 68 MGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEEGQKWGFL 127
MGLD GWQQRYARFCGRVVVLSILSLLLYPFL AWT+IGTLWF A+DCLPEEGQKWGFL
Sbjct: 1 MGLDFGWQQRYARFCGRVVVLSILSLLLYPFLCAWTVIGTLWFRDAKDCLPEEGQKWGFL 60
Query: 128 IWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQ 187
IWLLFSYC LLCIACMS+GKWL RRQAH RAQQGIPVSEYGVL+DMIRVP+WA+EAAG
Sbjct: 61 IWLLFSYCALLCIACMSVGKWLVRRQAHLFRAQQGIPVSEYGVLVDMIRVPDWAYEAAGL 120
Query: 188 EMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE 247
E R IGQD YHPGL+LT+AQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE
Sbjct: 121 ETRAIGQDATGYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE 180
Query: 248 WQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEW 307
VRG+PCAHNFH+ECIDEW
Sbjct: 181 ------------------------------------------VRGMPCAHNFHVECIDEW 198
Query: 308 LRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQSYLVRMQ 367
LRLNVKCPRCR SVFPNLDLSALSNL + D+E++S ++ VT TQPSS S
Sbjct: 199 LRLNVKCPRCRSSVFPNLDLSALSNLHS-DTEQTSHNAFVT------TQPSSLSR----- 246
Query: 368 GLLSPVHMGNTRLPNDTDIALQTVENGG 395
+P H +T TD AL +ENG
Sbjct: 247 --STPTHAAHTENSLQTDTALDALENGN 272
>gi|302755532|ref|XP_002961190.1| hypothetical protein SELMODRAFT_65861 [Selaginella moellendorffii]
gi|302766788|ref|XP_002966814.1| hypothetical protein SELMODRAFT_65866 [Selaginella moellendorffii]
gi|300164805|gb|EFJ31413.1| hypothetical protein SELMODRAFT_65866 [Selaginella moellendorffii]
gi|300172129|gb|EFJ38729.1| hypothetical protein SELMODRAFT_65861 [Selaginella moellendorffii]
Length = 293
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/334 (61%), Positives = 233/334 (69%), Gaps = 46/334 (13%)
Query: 1 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFV 60
M RGVDFKW+DGFFLSMLATSVI+V+INW RYH C YPLHIWIVVDY TVFVFR+LMFV
Sbjct: 1 MGARGVDFKWFDGFFLSMLATSVIVVSINWDRYHACMYPLHIWIVVDYATVFVFRILMFV 60
Query: 61 DNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120
DNG+AS MG D QQR F RV+VLS L+ +YPFLWAWT+IG+LWFT+AR CLPEE
Sbjct: 61 DNGIASKMGPDASPQQRLLLFQARVLVLSCLAFFMYPFLWAWTVIGSLWFTNARQCLPEE 120
Query: 121 GQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEW 180
GQKWGFLIWLLFSYCGL+ IACMS KWL RRQ+H QG +SE VL ++IRVP+W
Sbjct: 121 GQKWGFLIWLLFSYCGLISIACMSASKWLMRRQSHLQLVPQGSAISELEVLAELIRVPDW 180
Query: 181 AFEAA--GQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPIC 238
++ QE R DT A+ PGL LT AQREAVE+LIQ+LPKF+LK VPT+CS C IC
Sbjct: 181 TLRSSIPVQEQR-TAHDTIAF-PGLTLTPAQREAVESLIQQLPKFQLKRVPTECSSCSIC 238
Query: 239 LEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHN 298
LE+F VG E VRGLPCAHN
Sbjct: 239 LEDFTVGTE------------------------------------------VRGLPCAHN 256
Query: 299 FHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSN 332
FH++CIDEWLRLNVKCP+CRCSVFP DL + N
Sbjct: 257 FHVDCIDEWLRLNVKCPQCRCSVFPEADLMVVLN 290
>gi|297797265|ref|XP_002866517.1| hypothetical protein ARALYDRAFT_919563 [Arabidopsis lyrata subsp.
lyrata]
gi|297312352|gb|EFH42776.1| hypothetical protein ARALYDRAFT_919563 [Arabidopsis lyrata subsp.
lyrata]
Length = 331
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/347 (58%), Positives = 254/347 (73%), Gaps = 33/347 (9%)
Query: 24 IIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLDLGWQQRYAR-FC 82
+I+AINW +Y LC PL IW+VVDYTTVF+F LLMFVDN LA+G+ LD G QQR + FC
Sbjct: 10 LILAINWNKYLLCYKPLPIWLVVDYTTVFIFGLLMFVDNWLATGLALDFGRQQRDSSWFC 69
Query: 83 GRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEEGQKWGFLIWLLFSYCGLLCIAC 142
R VV+SIL+LLLYPF+W WT++G L F +ARDCL ++ QKW F+ WL+ S C L+CIA
Sbjct: 70 RRAVVMSILALLLYPFMWVWTVVGALLFINARDCLLDDLQKWDFITWLVSSCCVLVCIAW 129
Query: 143 MSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQEMRGIGQDTAAYHPG 202
+ KWL RR+A +RAQQGIP+SE+G+L+DM+RVP+WAF+AAGQEMR +GQD A Y
Sbjct: 130 TCVVKWLMRRRAQLLRAQQGIPISEFGILVDMVRVPDWAFDAAGQEMRSMGQDAATYD-- 187
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
L +QR EALIQELPKFRLK+VPTDC+ECPICLEEF++GNE
Sbjct: 188 -RLNPSQR---EALIQELPKFRLKSVPTDCTECPICLEEFYIGNE--------------- 228
Query: 263 KPLCKLVHALMFLKEHMST-----SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRC 317
+ LMF+ +S FL +QVRGLPCAHNFH+ECID+WLRLN KCPRC
Sbjct: 229 -----VTQLLMFVLVLVSVLCIDDLFFLLFVQVRGLPCAHNFHVECIDQWLRLNAKCPRC 283
Query: 318 RCSVFPNLDLSALSNLRTADS-ERSSASSVVTTTRYVRTQPSSQSYL 363
RCSVFP+L+LSA+SNL ++D+ + S S T +RY+R+QP SQSYL
Sbjct: 284 RCSVFPDLELSAVSNLESSDAGHQFSNSETTTESRYMRSQPPSQSYL 330
>gi|4678329|emb|CAB41140.1| putative protein [Arabidopsis thaliana]
Length = 292
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/330 (62%), Positives = 237/330 (71%), Gaps = 65/330 (19%)
Query: 81 FCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEEGQKWGFLIWLLFSYCGLLCI 140
FCGRVVVLS+LSLLLYPFLWAWT+IGT WFT ++ CLPEEGQKWGFLIWL+FSYCGLLCI
Sbjct: 2 FCGRVVVLSVLSLLLYPFLWAWTVIGTQWFTKSKTCLPEEGQKWGFLIWLMFSYCGLLCI 61
Query: 141 ACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQEMRGIGQDTAAYH 200
A + +GKWLTRRQ H +RAQQGIP+SE+G+L+DMIRVP+WAFEAAGQEMRGI QD A YH
Sbjct: 62 AFICVGKWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDWAFEAAGQEMRGISQDAATYH 121
Query: 201 PGLYLTAAQ-------------REAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE 247
PGLYLT AQ EAVEALIQELPKFRLKAVP DC EC ICLEEFH+G+E
Sbjct: 122 PGLYLTPAQASLVIYSQQAKQRTEAVEALIQELPKFRLKAVPDDCGECLICLEEFHIGHE 181
Query: 248 WQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEW 307
VRGLPCAHNFH+ECID+W
Sbjct: 182 ------------------------------------------VRGLPCAHNFHVECIDQW 199
Query: 308 LRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTT-TRYVRTQPSSQSYLVRM 366
LRLNVKCPRCRCSVFP+LDLSALSNL+++ +E+ S + T+ RY+R+QP S+SY +R+
Sbjct: 200 LRLNVKCPRCRCSVFPDLDLSALSNLQSSGTEQHSQVNTETSEARYIRSQPQSESYFLRV 259
Query: 367 QGLLSPVHMGNTRLPNDTDIALQTVENGGV 396
Q L+ PVH TD AL+T ENGGV
Sbjct: 260 QSLIHPVH---------TDTALETAENGGV 280
>gi|168007893|ref|XP_001756642.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692238|gb|EDQ78596.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 278
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/318 (50%), Positives = 198/318 (62%), Gaps = 46/318 (14%)
Query: 11 YDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGL 70
+DGFFLSMLATSVI+V +NW+RY LC PLHIWIVVDY TVF+FR+LMF+D+GLASGMG
Sbjct: 6 FDGFFLSMLATSVIVVLVNWQRYLLCRRPLHIWIVVDYATVFLFRILMFIDSGLASGMGP 65
Query: 71 DLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEEGQKWGFLIWL 130
+ +R RF GR+ VLS+LS + YPFLW WTI+G+LWF+ + CLPEEGQKWGFLIWL
Sbjct: 66 EATQMERMLRFKGRLFVLSVLSFVFYPFLWMWTILGSLWFSDTQGCLPEEGQKWGFLIWL 125
Query: 131 LFSYCGLLCIACMSMGKWLTRRQAHSIRAQQG-IPVSEYGVLLDMIRVPEWAFEAAGQEM 189
+FSYCGL+C+AC++ GKWL RQ+ G +SE+ + L+MIR PEW +
Sbjct: 126 VFSYCGLVCLACITAGKWLLHRQSRLASPPNGQSAISEFQMFLEMIRFPEWTSRHRTNAV 185
Query: 190 RGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQ 249
D A+ YL QRE VE IQ L KF L V + ++CPICL++F VGNE
Sbjct: 186 MMRTNDLASLVLFSYL---QRERVERAIQGLHKFSLSRVAENWTQCPICLDDFDVGNE-- 240
Query: 250 ADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLR 309
VR LPC H FH+ CID WLR
Sbjct: 241 ----------------------------------------VRTLPCTHTFHVACIDAWLR 260
Query: 310 LNVKCPRCRCSVFPNLDL 327
LNVKCP CR SVFP L+L
Sbjct: 261 LNVKCPHCRSSVFPELEL 278
>gi|449487766|ref|XP_004157790.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
Length = 206
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/253 (60%), Positives = 169/253 (66%), Gaps = 56/253 (22%)
Query: 143 MSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQEMRGIGQDTAAYHPG 202
MS+GKWL RRQAH RAQQGIPVSEYGVL+DMIRVP+WA+EAAG E R IGQD YHPG
Sbjct: 1 MSVGKWLVRRQAHLFRAQQGIPVSEYGVLVDMIRVPDWAYEAAGLETRAIGQDATGYHPG 60
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
L+LT+AQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE
Sbjct: 61 LFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE--------------- 105
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
VRG+PCAHNFH+ECIDEWLRLNVKCPRCR SVF
Sbjct: 106 ---------------------------VRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVF 138
Query: 323 PNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPN 382
PNLDLSALSNL + D+E++S ++ VT TQPSS S +P H +T
Sbjct: 139 PNLDLSALSNLHS-DTEQTSHNAFVT------TQPSSLSR-------STPTHAAHTENSL 184
Query: 383 DTDIALQTVENGG 395
TD AL +ENG
Sbjct: 185 QTDTALDALENGN 197
>gi|255638731|gb|ACU19670.1| unknown [Glycine max]
Length = 205
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/229 (59%), Positives = 153/229 (66%), Gaps = 46/229 (20%)
Query: 174 MIRVPEWAFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCS 233
MIRVP+WAFEAAGQE R + QD AAYHPGLYLT AQREAVEALIQELP FRL AVPT+CS
Sbjct: 1 MIRVPDWAFEAAGQETRSMAQD-AAYHPGLYLTPAQREAVEALIQELPSFRLTAVPTNCS 59
Query: 234 ECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGL 293
EC ICLEEFHVGN QVRGL
Sbjct: 60 ECLICLEEFHVGN------------------------------------------QVRGL 77
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYV 353
PC HNFH+ECIDEWLRLNV CPRCRCSVFPNLDLSALSN+R+ +SE+SSA++V T+R +
Sbjct: 78 PCTHNFHVECIDEWLRLNVNCPRCRCSVFPNLDLSALSNIRS-ESEQSSATAV--TSRDM 134
Query: 354 RTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQN 402
Q SSQSYL+R+QG L PV + +TD AL+ ENG V TQN
Sbjct: 135 TGQTSSQSYLLRLQGPLHPVCVDFAGPAGETDNALENAENGVVPVVTQN 183
>gi|19172014|gb|AAL85697.1|AF474982_1 hypothetical protein T17F15.140-like protein [Hordeum vulgare
subsp. vulgare]
Length = 381
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 115/172 (66%), Gaps = 43/172 (25%)
Query: 142 CMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQEMRGIGQDTAAYHP 201
C+++GKWL RR A +RAQQGIPVSEYGVL+DMI VP+WAFEA G E+RG+GQDTA YHP
Sbjct: 253 CVAVGKWLNRRHALQLRAQQGIPVSEYGVLVDMIGVPDWAFEAVGLELRGMGQDTA-YHP 311
Query: 202 GLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTS 261
GLYLT AQREAVEALIQEL KF LKAVPTDCSECPI LEEF VGNE
Sbjct: 312 GLYLTTAQREAVEALIQELTKFMLKAVPTDCSECPIYLEEFKVGNE-------------- 357
Query: 262 HKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK 313
V GLPC HNFH+ECID+WLRLNVK
Sbjct: 358 ----------------------------VCGLPCVHNFHVECIDQWLRLNVK 381
>gi|147839111|emb|CAN68092.1| hypothetical protein VITISV_012749 [Vitis vinifera]
Length = 943
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 88/93 (94%)
Query: 117 LPEEGQKWGFLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIR 176
LPEEGQKWGFLIWLLFSYCGLLCIACMSMGKW +RRQAH +RAQQGIPVSEYGVL+DMIR
Sbjct: 467 LPEEGQKWGFLIWLLFSYCGLLCIACMSMGKWFSRRQAHLLRAQQGIPVSEYGVLVDMIR 526
Query: 177 VPEWAFEAAGQEMRGIGQDTAAYHPGLYLTAAQ 209
VP+WAFEAAGQEMRG+GQD AAYHPGLYLT Q
Sbjct: 527 VPDWAFEAAGQEMRGMGQDAAAYHPGLYLTPTQ 559
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 101/136 (74%), Gaps = 5/136 (3%)
Query: 283 LFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
L+L QVRGLPCAHNFH+ECIDEWLRLNVKCPRCRCSVFPNLDLSAL++ R ADSERSS
Sbjct: 553 LYLTPTQVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALTHFR-ADSERSS 611
Query: 343 ASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGV-LSATQ 401
A SVVT TRYVR QP SQ Y++R+QG L PV N ND D AL+ ENGG+ + +
Sbjct: 612 A-SVVTATRYVRVQPPSQGYMLRLQGFLRPVRTENAGAGNDADNALENAENGGLPVKGXR 670
Query: 402 NRIAMGPF--SSTGRV 415
N G F ++GRV
Sbjct: 671 NYFQRGAFRLQASGRV 686
>gi|221508316|gb|EEE33903.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii VEG]
Length = 321
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 80/317 (25%)
Query: 14 FFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLDLG 73
FF + ++S I V +W + C P+ W++V Y ++ FRL ++ L+ +
Sbjct: 14 FFAFLYSSSDIFV--DWDSFESCAKPIQYWLLVSYASIITFRLSHYLGQCLSEDGEDFIL 71
Query: 74 WQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSAR----DCLPEEGQKWGFLIW 129
++QR F V++L IL +PF WTI+GT+WF + CLP W F+ W
Sbjct: 72 YRQRGPPFWVNVLILGIL----FPFFCCWTIVGTVWFAQVQSKTPQCLPRGSHPWFFVFW 127
Query: 130 LLFSYCGL----LCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAA 185
L+ Y + L IA ++ ++ RR A+Q E+ +L + + W
Sbjct: 128 LVLCYVWIVIYCLFIAIAAVFEYRARR------AEQ-----EFQILQNEDMLTRW----- 171
Query: 186 GQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVG 245
G+ G+++ ++ IQ+LP +L++VP D S C ICL++F G
Sbjct: 172 -------GRINVFAQYGIHIL--RKGLTTEQIQKLPHEKLQSVPIDQSACSICLDDFRAG 222
Query: 246 NEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECID 305
++ + VLQ C H FH CID
Sbjct: 223 DD-------------------------------------VRVLQA----CGHIFHRCCID 241
Query: 306 EWLRLNVKCPRCRCSVF 322
WL N CP C+ +++
Sbjct: 242 IWLLRNAICPNCKSAIY 258
>gi|237834059|ref|XP_002366327.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211963991|gb|EEA99186.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|221486552|gb|EEE24813.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii GT1]
Length = 321
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 80/317 (25%)
Query: 14 FFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLDLG 73
FF + ++S I V +W + C P+ W++V Y ++ FRL ++ L+ +
Sbjct: 14 FFAFLYSSSDIFV--DWDSFESCAKPIQYWLLVSYASIITFRLSHYLGQCLSEDGEDFIL 71
Query: 74 WQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSAR----DCLPEEGQKWGFLIW 129
++QR F V++L IL +PF WTI+GT+WF + CLP W F+ W
Sbjct: 72 YRQRGPPFWVNVLILGIL----FPFFCCWTIVGTVWFAQVQSKTPQCLPRGSHPWFFVFW 127
Query: 130 LLFSYCGL----LCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAA 185
L+ Y + L IA ++ ++ RR A+Q E+ +L + + W
Sbjct: 128 LVLCYVWIVIYCLFIAIAAVFEYRARR------AEQ-----EFQILQNEDMLTRW----- 171
Query: 186 GQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVG 245
G+ G+++ ++ IQ+LP +L++VP D S C ICL++F G
Sbjct: 172 -------GRINVFAQYGIHIL--RKGLTTEQIQKLPHEKLQSVPIDQSACSICLDDFRAG 222
Query: 246 NEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECID 305
++ + VLQ C H FH CID
Sbjct: 223 DD-------------------------------------VRVLQA----CGHIFHRCCID 241
Query: 306 EWLRLNVKCPRCRCSVF 322
WL N CP C+ +++
Sbjct: 242 IWLLRNAICPNCKSAIY 258
>gi|401409550|ref|XP_003884223.1| putative zinc finger (C3HC4 RING finger) protein [Neospora caninum
Liverpool]
gi|325118641|emb|CBZ54192.1| putative zinc finger (C3HC4 RING finger) protein [Neospora caninum
Liverpool]
Length = 320
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 80/317 (25%)
Query: 14 FFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLDLG 73
FF + ++S I I+W+ + C P+ W+++ Y ++ FRL ++ L+ +
Sbjct: 14 FFAFLYSSSDIF--IDWESFESCVKPIQYWLLISYASIITFRLSHYLGQCLSEDGEDFIL 71
Query: 74 WQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARD----CLPEEGQKWGFLIW 129
++QR F V++L IL +PF + WTI+GT+WF + CLP W F+ W
Sbjct: 72 YRQRGPPFWVNVLILGIL----FPFFFCWTIVGTVWFAQVQSQTPQCLPRGSHPWFFVFW 127
Query: 130 LLFSYCGL----LCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAA 185
L+ Y + L IA ++ ++ RR A+Q E+ +L + + W
Sbjct: 128 LVLCYVWIVIYILFIAIAAVFEYRARR------AEQ-----EFQILQNEDMLTRW----- 171
Query: 186 GQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVG 245
G+ G+++ ++ IQ LP +L VP D C ICL++F G
Sbjct: 172 -------GRINVFAQYGIHIL--RKGLTTDQIQRLPHEKLATVPVDQPACSICLDDFRAG 222
Query: 246 NEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECID 305
++ + VLQ C+H FH CID
Sbjct: 223 DD-------------------------------------VRVLQA----CSHLFHRSCID 241
Query: 306 EWLRLNVKCPRCRCSVF 322
WL N CP C+ +++
Sbjct: 242 IWLLRNAICPNCKSAIY 258
>gi|357017691|gb|AET50874.1| hypothetical protein [Eimeria tenella]
Length = 297
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 129/343 (37%), Gaps = 75/343 (21%)
Query: 12 DGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLD 71
D L S V + W+ + C+ P+H+W++ Y + FRL ++ L++
Sbjct: 10 DAILLFAFLYSSSDVFVEWEAFDTCSKPVHLWLLGSYVALVAFRLSHYLGQYLSNDGEEF 69
Query: 72 LGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARD----CLPEEGQKWGFL 127
+ +QR F V++L I L+P + WTI+GT+WF ++ CLP E W F
Sbjct: 70 MLHRQRGPPFWVSVLILGI----LFPCFFGWTIVGTVWFLEIQEETPYCLPRESHPWFFT 125
Query: 128 IWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQ 187
WL Y +L + +A + I +E DMIR W
Sbjct: 126 FWLALCYIWILIYIIFIATAVVCEYRARRMERDLQILQNE-----DMIR--RW------- 171
Query: 188 EMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE 247
G+ G+Y+ +R + +P +L+ PT+ C ICLEEF G+
Sbjct: 172 -----GRIRIFSDYGIYIF--RRGLTPDQVARIPWQKLEYDPTEMMPCSICLEEFAAGDN 224
Query: 248 WQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEW 307
+ +LQ C H FH CID W
Sbjct: 225 -------------------------------------VRILQA----CGHIFHKCCIDIW 243
Query: 308 LRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTT 350
L N CP C+ + L+ SN SE S +T
Sbjct: 244 LLRNAVCPNCKSPI-----LAGPSNGCNEPSEVVGTRSATCST 281
>gi|221054105|ref|XP_002261800.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
gi|193808260|emb|CAQ38963.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
Length = 272
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 123/313 (39%), Gaps = 71/313 (22%)
Query: 11 YDGFFLSM-LATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMG 69
Y+ F L + + S++ + + WK + C P+H+W+VV + ++ ++RL F+ L++
Sbjct: 14 YNDFILLLSVCYSIVDIFLQWKDFSKCHKPIHVWLVVSFISIILYRLSHFLAQYLSNDGD 73
Query: 70 LDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTS----ARDCLPEEGQKWG 125
+ +++ + ++VL + L+PF W ++GT+W CLP W
Sbjct: 74 DLIIYRRNTPPYYINLLVLCV----LFPFFLVWNVVGTVWIYQIIKYTPKCLPRNNHPWF 129
Query: 126 FLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAA 185
++W++ Y +L + QA I + I + + W+
Sbjct: 130 IVLWIVLCYVWILLYIFFILLSLYLEYQAR-IYERTLISMQTNDIF------TRWS--GN 180
Query: 186 GQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVG 245
MR G Y GL L I+ LP +K V ++ S+C ICL +F VG
Sbjct: 181 IDMMRDYG--IFIYRNGLRLKQ---------IENLPYHYIKNVRSE-SKCSICLNDFQVG 228
Query: 246 NEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECID 305
+ V L+ C+H FH CID
Sbjct: 229 ---------------------ECVRTLLL--------------------CSHTFHKSCID 247
Query: 306 EWLRLNVKCPRCR 318
WL + CP C+
Sbjct: 248 LWLVRSATCPNCK 260
>gi|209879485|ref|XP_002141183.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209556789|gb|EEA06834.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 300
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 133/357 (37%), Gaps = 81/357 (22%)
Query: 12 DGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLD 71
D L S I + W + C +P+ +W+V+ Y T+ +FR++ ++ ++
Sbjct: 8 DAILAFALIYSSIDIFTQWNSFASCCHPIQLWLVISYATIILFRIIYYISQYISEDSEDF 67
Query: 72 LGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSAR----DCLPEEGQK--WG 125
L + LSIL +++PF +WTI+GT+WF + CLP G W
Sbjct: 68 L--PSTSTSGVPFWLNLSILC-IIFPFFVSWTIVGTIWFKNIELKTPQCLPRNGANHPWF 124
Query: 126 FLIWLLFSYCGLLCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAA 185
+ WL+ Y W+ A I +S + IR E +
Sbjct: 125 LIFWLILCYV------------WIAMYSAF-------IGISVFFEF--RIRRAEEDLQLL 163
Query: 186 GQE--MRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDC-SECPICLEEF 242
E +R G+ G++ VE + LP ++K+ +C C IC+E+F
Sbjct: 164 ENEEIVRRWGRLRLLADYGIHFIRHGLSPVE--VSALPVRKVKS--NECIGPCSICIEDF 219
Query: 243 HVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHI 301
G+ +R LP C H+FH
Sbjct: 220 KAGD------------------------------------------AIRTLPACGHSFHK 237
Query: 302 ECIDEWLRLNVKCPRCRCSV-FPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQP 357
CID WL N CP C+ V + + +ADS+ S ++TT + P
Sbjct: 238 SCIDTWLLRNAICPNCKTLVRYGKTETGTTPTRFSADSDTSMNQDTISTTDFNGEDP 294
>gi|66363338|ref|XP_628635.1| conserved 3 transmembrane domain membrane associated RING finger
domain (shared by plants and apicomplexans)
[Cryptosporidium parvum Iowa II]
gi|46229635|gb|EAK90453.1| conserved 3 transmembrane domain membrane associated RING finger
domain (shared by plants and apicomplexans)
[Cryptosporidium parvum Iowa II]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 140/364 (38%), Gaps = 87/364 (23%)
Query: 16 LSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLDLGWQ 75
L+ + +S +++ W + C +P+ +W+++ Y T+ FR++ +V N L+ G L
Sbjct: 13 LAFMYSSADLIS-QWDSFSTCCHPIQLWLIISYITIIAFRVIHYVSNYLSEGSDDVLP-- 69
Query: 76 QRYARFCGRVVVLSI-LSLLLYPFLWAWTIIGTLWFTSARD----CLPEEGQK--WGFLI 128
Y+ G L++ + L++PF +WT++GT+W + CL G W +
Sbjct: 70 --YSSTSGIPFWLNLSVVCLIFPFFLSWTVVGTVWLKNIESKTPQCLAGNGSSHPWFLIF 127
Query: 129 WLLFSYCGLLC-IACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQ 187
WL+ Y ++ A +S+ + R RA++ + + E +
Sbjct: 128 WLVLCYIWIVAYTAFISISIFFEFRVR---RAEEDLLLLE-----------------NDE 167
Query: 188 EMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE 247
MR G+ G++ VE L K +++ CS IC+E+F + E
Sbjct: 168 VMRRWGRLRLLADYGIHFIRHGLTPVEVAALPLSKVKVEEFNDPCS---ICIEDFKLNEE 224
Query: 248 WQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDE 306
+R LP C H+FH CID
Sbjct: 225 ------------------------------------------IRTLPACGHSFHKGCIDA 242
Query: 307 WLRLNVKCPRCRCSVFPNLDLSALSNLRTA--------DSERSSASSVVTTTRYVRTQPS 358
WL N CP C+ V + S R + S RS++ V+T R
Sbjct: 243 WLLRNAICPNCKTLVRYGKTETGTSPCRGSSHIPDHQNSSYRSNSRDSVSTMDTRREAGR 302
Query: 359 SQSY 362
+SY
Sbjct: 303 ERSY 306
>gi|67593261|ref|XP_665707.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656511|gb|EAL35476.1| hypothetical protein Chro.70547 [Cryptosporidium hominis]
Length = 311
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 139/364 (38%), Gaps = 87/364 (23%)
Query: 16 LSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLDLGWQ 75
L+ + +S +++ W + C +P+ +W+++ Y T+ FR++ +V N L+ G L
Sbjct: 13 LAFMYSSADLIS-QWDSFSTCCHPIQLWLIISYITIIAFRVIHYVSNYLSEGSDDVLP-- 69
Query: 76 QRYARFCGRVVVLSI-LSLLLYPFLWAWTIIGTLWFTSARD----CLPEEGQK--WGFLI 128
Y+ G L++ + L++PF +WT++GT+W + CL G W +
Sbjct: 70 --YSSTSGIPFWLNLSVVCLIFPFFLSWTVVGTVWLKNIESKTPQCLAGNGSSHPWFLIF 127
Query: 129 WLLFSYCGLLC-IACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQ 187
WL+ Y ++ A +S+ + R RA++ + + E +
Sbjct: 128 WLVLCYIWIVAYTAFISISIFFEFRVR---RAEEDLLLLE-----------------NDE 167
Query: 188 EMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNE 247
MR G+ G++ VE L K +++ CS IC+E+F + E
Sbjct: 168 VMRRWGRLRLLADYGIHFIRHGLTPVEVAALPLSKVKVEEFNDPCS---ICIEDFKLNEE 224
Query: 248 WQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDE 306
+R LP C H+FH CID
Sbjct: 225 ------------------------------------------IRTLPACGHSFHKGCIDA 242
Query: 307 WLRLNVKCPRCRCSVFPNLDLSALSNLR--------TADSERSSASSVVTTTRYVRTQPS 358
WL N CP C+ V + S R S RS++ V+T R
Sbjct: 243 WLLRNAICPNCKTLVRYGKTETGTSPCRGNSHIPDHQNSSYRSNSRDSVSTMDTRREAGR 302
Query: 359 SQSY 362
+SY
Sbjct: 303 ERSY 306
>gi|156081989|ref|XP_001608487.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801058|gb|EDL42463.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 272
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 121/318 (38%), Gaps = 81/318 (25%)
Query: 11 YDGFFLSM-LATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMG 69
Y+ F L + + S+ + + W + C P+H+W+VV + ++ ++RL F+ L++
Sbjct: 14 YNDFILLLSVGYSIGDIFLQWNNFSSCHKPIHVWLVVSFISIVLYRLSHFLAQYLSNDGD 73
Query: 70 LDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTS----ARDCLPEEGQKWG 125
+ +++ + ++VL + L+PF W ++GT+W CLP W
Sbjct: 74 DLIIYRRNTPPYYINLLVLCV----LFPFFLIWNVVGTVWIYQIIKYTPKCLPRNNHPWF 129
Query: 126 FLIWLLFSYCGLLCIACMSMGKWLTRRQAHS-----IRAQQGIPVSEYGVLLDMIRVPEW 180
++W++ Y +L + QA + Q + + +DM
Sbjct: 130 IVLWIVLCYVWILLYLFFILLSLYLEYQARVYERTLMSMQTNDIFTRWSGNIDM------ 183
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
MR G Y GL L I+ LP +K V T+ S+C ICL
Sbjct: 184 --------MRDYG--IFIYRKGLRLKQ---------IESLPYHYIKNVRTE-SKCSICLN 223
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFH 300
+F VG + V L+ C+H FH
Sbjct: 224 DFQVG---------------------ECVRTLLL--------------------CSHTFH 242
Query: 301 IECIDEWLRLNVKCPRCR 318
CID WL + CP C+
Sbjct: 243 KSCIDLWLVRSATCPNCK 260
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 116/317 (36%), Gaps = 74/317 (23%)
Query: 36 CTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLDLGWQQRYARFCGRVVVLSILSLLL 95
C+ P+H W++V V V R L+ + L+ Q R R + LSIL L+
Sbjct: 26 CSKPIHYWLLVTIFLVAVLRGLILI---------LEKTNQNRIFR----ITALSIL-LVF 71
Query: 96 YPFLWAWTIIGTLWFTSARDCLPE---EGQKWGFLIW------LLFSYCGLLCIACMSMG 146
+P WT++GT WF S PE + +W + W L+F+Y + M
Sbjct: 72 FPTFIIWTLVGTSWFNSIHKETPECIADNVRWVTVFWISIAFFLIFTYIATVLTL---ML 128
Query: 147 KWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPEWAFEAAGQEMRGIGQDTAAYHPGLYLT 206
+ + R Q + E +I+ E Q++ D+ +
Sbjct: 129 EQCSGRSLEGYNNQDQLSNQER-----LIQSSEGLNSQERQQIEKRNYDS-------WFD 176
Query: 207 AAQREAVEALIQELPKFRLKAVPTDCSECPIC----LEEFHVGNE--------------- 247
E + FR V D P+ L E H+ E
Sbjct: 177 QKLEEKLNESSNLSSTFRQVEVEIDNCITPVHYRERLTERHLNKEFPNRSSSMITGLHKT 236
Query: 248 -----WQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHI 301
+Q D + + +C + H L F + QV+ +P C H +HI
Sbjct: 237 ASELSYQMDNQLVQTVISEIDNICPICH-LDFERND----------QVKIMPECYHTYHI 285
Query: 302 ECIDEWLRLNVKCPRCR 318
+CID+WL+L +CP C
Sbjct: 286 DCIDQWLKLKSRCPMCN 302
>gi|297813655|ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
gi|297320548|gb|EFH50970.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTD----------CSEC----PICLEEFHVGNEW 248
LY A Q A + I ++PKFR + D +EC PI E + E
Sbjct: 281 LYAVADQEGASKNDIDQMPKFRFTKIGNDEKLSGKARGIMTECGTDSPI---ERSLSPED 337
Query: 249 QADVKFYPYGFTSHKPLCKLVHA--LMFLKEH-MSTSLFLEVLQVRGLPCAHNFHIECID 305
F+ +C+L+++ LM LKE + + + +++R LPC H+FH CID
Sbjct: 338 AVHSHFHILMQLYIFKVCRLINSWLLMILKECCICLCEYEDGVELRELPCNHHFHCACID 397
Query: 306 EWLRLNVKCPRCRCSVFPNLD 326
+WL +N +CP C+ ++ N +
Sbjct: 398 KWLHINSRCPLCKFNILKNAN 418
>gi|357481703|ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|388506770|gb|AFK41451.1| unknown [Medicago truncatula]
Length = 387
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYG--FT 260
LY A Q A + I++L KF+ + V + NE Q D P G T
Sbjct: 269 LYAVADQEGASKEDIEQLSKFKFRKVES---------------NEKQTDNNQGPVGGIMT 313
Query: 261 SHKPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + H L + S + + +++R LPC H+FH C+D+WL +N CP C+
Sbjct: 314 ECRADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 373
Query: 319 CSVFPNLDL 327
++ + +L
Sbjct: 374 YNILKSSNL 382
>gi|4539459|emb|CAB39939.1| putative protein [Arabidopsis thaliana]
gi|7267868|emb|CAB78211.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 26/144 (18%)
Query: 203 LYLTAAQREAVEALIQELPKFRL-------------KAVPTDC-SECPI---CLEEFHVG 245
LY A Q A + I ++PKFR + + T+C ++ PI E V
Sbjct: 279 LYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAVQ 338
Query: 246 NEWQADVKFYPYGFTSHKPLCKLVHA--LMFLKEH-MSTSLFLEVLQVRGLPCAHNFHIE 302
+ + +K Y +CK+ +A LM L+E + + + +++R LPC H+FH
Sbjct: 339 SHFHILIKLYIL------KVCKIDNAWLLMILQECCICLCEYEDGVELRELPCNHHFHCT 392
Query: 303 CIDEWLRLNVKCPRCRCSVFPNLD 326
CID+WL +N +CP C+ ++ N +
Sbjct: 393 CIDKWLHINSRCPLCKFNILKNAN 416
>gi|256079620|ref|XP_002576084.1| ring finger protein 11 (sid 1669) (nedd4 ww domain-binding protein
2) [Schistosoma mansoni]
gi|353230819|emb|CCD77236.1| putative ring finger protein 11 (sid 1669) (nedd4 ww domain-binding
protein 2) [Schistosoma mansoni]
Length = 468
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSA 343
+ + ++R LPC H FH++CID WL+ + CP+CR V L + R S
Sbjct: 234 YQDKDRLRHLPCGHAFHMKCIDSWLKQSTTCPKCRAGVRAGLARLERNRQRQRAQSNSGT 293
Query: 344 SSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQN 402
+S T R VR +P + + V+ Q S G ++ N I Q+ G S TQN
Sbjct: 294 TSKPTPIRAVRPRPGASTSNVQEQHRPSNSRQG-SQTTNRNQITTQSSV-VGTASDTQN 350
>gi|224286153|gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYG---- 258
LY A Q A E I LPK++ K++ G+E + K P+G
Sbjct: 279 LYAVADQEGASEEDIGLLPKYKFKSIG---------------GSEKISGEKSGPFGGIMN 323
Query: 259 FTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + + V + + + S + + +++R LPC+H+FH CID+WLR+N CP C+
Sbjct: 324 LCTGESSTERVLSAEDAECCICLSTYDDGVELRELPCSHHFHCTCIDKWLRINATCPLCK 383
Query: 319 CSVFPN 324
++ +
Sbjct: 384 YNIIKS 389
>gi|443723425|gb|ELU11856.1| hypothetical protein CAPTEDRAFT_219920, partial [Capitella teleta]
Length = 265
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + +VR LPC H +H CIDEWLR+ +CP CRC V
Sbjct: 220 SEFEDKEEVRRLPCLHQYHTACIDEWLRMKAQCPTCRCDV 259
>gi|70949871|ref|XP_744307.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524207|emb|CAH80958.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 272
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 121/322 (37%), Gaps = 72/322 (22%)
Query: 5 GVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGL 64
GV + D + + S+ + + W+ + C P+ +W+VV + ++ ++RL + L
Sbjct: 9 GVRLSFNDFILIISVLYSICDIFMQWEEFSKCHKPIQLWLVVSFISIVLYRLAHILSQYL 68
Query: 65 ASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTS----ARDCLPEE 120
++ + Y R ++ +IL +L+PF + W IIGT+W CLP+
Sbjct: 69 SNNNESFII----YRRNGPPYIINAILIFILFPFFFIWNIIGTVWIYQIIKYTPKCLPKN 124
Query: 121 GQKWGFLIWLLFSYCGL-LCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPE 179
W ++W+ Y + L + +S+ + + R I +++
Sbjct: 125 NHPWFIILWIALCYIWIFLYLFFISLSLYFEYQARLYERRLTNIQPNDF--------FSR 176
Query: 180 WAFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICL 239
W + + GI Y G L + Q I LP + + +VP D +C ICL
Sbjct: 177 WGYNIDLMQDYGI----YIYRNG--LNSKQ-------INSLPYYYINSVPDD-MKCSICL 222
Query: 240 EEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNF 299
+ + + +L L C H F
Sbjct: 223 NDLQIN--------------------------------ECARTLLL---------CNHTF 241
Query: 300 HIECIDEWLRLNVKCPRCRCSV 321
H CID WL + CP C+ +
Sbjct: 242 HKACIDLWLIRSATCPNCKSPI 263
>gi|242018674|ref|XP_002429799.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514811|gb|EEB17061.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 125
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
S F E+ VR LPC H FHIEC+D+WL N +CP CR + +L+
Sbjct: 75 SEFEELEDVRRLPCMHLFHIECVDQWLSTNKRCPICRVDIETHLN 119
>gi|356497876|ref|XP_003517782.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
Length = 376
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF-PNLDLSALSNLRTADSERS 341
FLE ++R LP C H FHIECID WL N CP CR +++ P A N +
Sbjct: 156 FLEQDKLRLLPMCNHAFHIECIDTWLLSNSTCPLCRGTLYSPGF---AFENSVFDFESQL 212
Query: 342 SASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGG------ 395
V + +++SY+V + + S V +GN R N+ D+ ++ E
Sbjct: 213 KEDGVSGSGGVGSVNKTTESYIVNGKRVFS-VRLGNFRSTNNQDVVVERGEGESSSVNLD 271
Query: 396 ------------VLSATQNRIAMGPFSSTGRVLV 417
+++ + R+A+GP S + R L+
Sbjct: 272 VRRCYSMGSFQYIVADSDLRVALGPSSGSMRQLL 305
>gi|297844168|ref|XP_002889965.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335807|gb|EFH66224.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 14/128 (10%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I++L KF+ + V H G+E Q + +
Sbjct: 216 LYAVADQEGASKEDIEQLTKFKFRKVGD---------ANRHTGDEAQGTTEGIMTECGTD 266
Query: 263 KPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
P+ H L+ + S + + ++R LPC H+FH C+D+WL +N CP C+ +
Sbjct: 267 SPI---EHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYN 323
Query: 321 VFPNLDLS 328
+ + +L
Sbjct: 324 ILKSSNLD 331
>gi|312084983|ref|XP_003144497.1| hypothetical protein LOAG_08919 [Loa loa]
Length = 514
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
VR LPCAH+FH++CID+WLR N CP CR + P+ D
Sbjct: 409 VRMLPCAHHFHLKCIDKWLRGNRTCPICRQNAAPDED 445
>gi|393903772|gb|EFO19573.2| hypothetical protein LOAG_08919 [Loa loa]
Length = 508
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
VR LPCAH+FH++CID+WLR N CP CR + P+ D
Sbjct: 403 VRMLPCAHHFHLKCIDKWLRGNRTCPICRQNAAPDED 439
>gi|115449737|ref|NP_001048540.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|48716363|dbj|BAD22974.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|48716498|dbj|BAD23103.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|113538071|dbj|BAF10454.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|222623928|gb|EEE58060.1| hypothetical protein OsJ_08900 [Oryza sativa Japonica Group]
Length = 320
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 49/132 (37%), Gaps = 47/132 (35%)
Query: 198 AYHPGLYLTAAQREAVEALIQELPKFR----LKAVPTDCSECPICLEEFHVGNEWQADVK 253
A L A R EA IQ LP FR +K D SEC +C+ EF
Sbjct: 101 AASSSLPAVAEPRGLEEAAIQSLPAFRYRKAIKDTTADSSECAVCISEFQ---------- 150
Query: 254 FYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNV 312
E +VR LP C H FH++CID WL+ N
Sbjct: 151 --------------------------------EEERVRLLPSCLHVFHVDCIDTWLQGNA 178
Query: 313 KCPRCRCSVFPN 324
CP CR ++ N
Sbjct: 179 NCPLCRAAIATN 190
>gi|124802679|ref|XP_001347560.1| Zinc finger, C3HC4 type, putative [Plasmodium falciparum 3D7]
gi|23495142|gb|AAN35473.1| Zinc finger, C3HC4 type, putative [Plasmodium falciparum 3D7]
Length = 274
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 111/299 (37%), Gaps = 74/299 (24%)
Query: 26 VAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMGLDLGWQQRYARFCGRV 85
+ + W + C P+ +W+VV + ++ ++RL F LA + D Y R
Sbjct: 32 IFVQWNEFSKCYKPIQLWLVVSFISIVLYRLSHF----LAQYLSNDNDDFIIYRRNNPPY 87
Query: 86 VVLSILSLLLYPFLWAWTIIGTLWFTS----ARDCLPEEGQKWGFLIWLLFSYCG-LLCI 140
+ ++ +L+PF + W IIGT+W +CLP W ++W++ Y LL +
Sbjct: 88 YISFLVLFILFPFFFIWNIIGTIWIYQIIKYTPNCLPRNNHPWFIVLWIVLCYIWILLYL 147
Query: 141 ACMSMGKWLTRRQAHSIRAQQGIPVSE-YGVLLDMIRVPEWAFEAAGQEMRGIGQDTAAY 199
+ + +L + R I + + D I + MR G Y
Sbjct: 148 FFIILSIYLEYQSRIYERTITNIQTDDIFSRWTDNIDL-----------MRDYG--IFIY 194
Query: 200 HPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGF 259
GL L I+ LP + +K + + S+C ICL +F +
Sbjct: 195 RNGLRLKQ---------IENLPFYYIKNISNE-SKCSICLNDFQID-------------- 230
Query: 260 TSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ V L+ C H FH CID WL + CP C+
Sbjct: 231 -------ECVRTLLL--------------------CNHTFHKSCIDLWLIRSATCPNCK 262
>gi|301119555|ref|XP_002907505.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106017|gb|EEY64069.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 551
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
F + VR LPC H FH+ CIDEWL+ N CP C+ N+DL A+
Sbjct: 488 FEDGEDVRNLPCKHIFHVACIDEWLKRNTSCPMCKS----NVDLDAVD 531
>gi|218191836|gb|EEC74263.1| hypothetical protein OsI_09477 [Oryza sativa Indica Group]
Length = 320
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 49/133 (36%), Gaps = 47/133 (35%)
Query: 197 AAYHPGLYLTAAQREAVEALIQELPKFR----LKAVPTDCSECPICLEEFHVGNEWQADV 252
A L A R EA IQ LP FR +K D SEC +C+ EF
Sbjct: 100 GAASSSLPEVAEPRGLEEAAIQSLPAFRYRKAIKDTTADSSECAVCISEFQ--------- 150
Query: 253 KFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLN 311
E +VR LP C H FH++CID WL+ N
Sbjct: 151 ---------------------------------EEERVRLLPSCLHVFHVDCIDTWLQGN 177
Query: 312 VKCPRCRCSVFPN 324
CP CR ++ N
Sbjct: 178 ANCPLCRAAIATN 190
>gi|348690933|gb|EGZ30747.1| hypothetical protein PHYSODRAFT_295425 [Phytophthora sojae]
Length = 548
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
F + VR LPC H FH+ CIDEWL+ N CP C+ N+DL A+
Sbjct: 486 FEDGEDVRNLPCKHIFHVACIDEWLKRNTSCPMCKS----NVDLDAVD 529
>gi|326515202|dbj|BAK03514.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532004|dbj|BAK01378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 423
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ +R LPCAH FH ECID WLR+ CP C+ SVF
Sbjct: 389 VSLRHLPCAHKFHKECIDRWLRMRTSCPVCKSSVF 423
>gi|324505404|gb|ADY42324.1| RING finger protein 38 [Ascaris suum]
Length = 522
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSA 343
F + VR LPC H++H++C+D+WL+ N CP CR S N+D+ S S A
Sbjct: 441 FEKRDHVRVLPCDHHYHVKCVDKWLKTNRTCPICRKSASENIDVGVASPTAQMPSTPHVA 500
Query: 344 SSVVT 348
V+T
Sbjct: 501 VQVIT 505
>gi|324506141|gb|ADY42630.1| RING finger protein 38 [Ascaris suum]
Length = 505
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSA 343
F + VR LPC H++H++C+D+WL+ N CP CR S N+D+ S S A
Sbjct: 424 FEKRDHVRVLPCDHHYHVKCVDKWLKTNRTCPICRKSASENIDVGVASPTAQMPSTPHVA 483
Query: 344 SSVVT 348
V+T
Sbjct: 484 VQVIT 488
>gi|383149313|gb|AFG56549.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
Length = 135
Score = 55.5 bits (132), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 45/135 (33%)
Query: 208 AQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCK 267
A R AVEA+ K + + +D S+C +CLEEF VG+E
Sbjct: 41 ASRSAVEAMAA--VKISQEHLSSDLSQCAVCLEEFEVGSE-------------------- 78
Query: 268 LVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDL 327
R +PC H FH +CI WL+L+ CP CR + P D
Sbjct: 79 ----------------------AREMPCKHMFHSDCIQPWLKLHSSCPVCRYQM-PVDDE 115
Query: 328 SALSNLRTADSERSS 342
R A+ SS
Sbjct: 116 DDDVEKRQAEEANSS 130
>gi|68068753|ref|XP_676287.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495914|emb|CAH97179.1| conserved hypothetical protein [Plasmodium berghei]
Length = 272
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 120/322 (37%), Gaps = 72/322 (22%)
Query: 5 GVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGL 64
GV + D + + S+ + + W + C P+ +W+V+ + ++ ++RL + L
Sbjct: 9 GVHLSFNDFILIISVFYSICDIFMQWGEFSKCHKPIQLWLVISFISIVLYRLAHILSQHL 68
Query: 65 ASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTS----ARDCLPEE 120
++ + Y R ++ +IL +L+PF + W IIGT+W CLP+
Sbjct: 69 SNNNENFI----IYRRNGPPYIINAILIFILFPFFFIWNIIGTIWIYQIIKYTPKCLPKN 124
Query: 121 GQKWGFLIWLLFSYCGL-LCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPE 179
W ++W++ Y + L + +S+ + + R I +++
Sbjct: 125 NHPWFIVLWIVLCYIWIFLYLFFISLSLYFEYQARLYERRLTNIHPNDF--------FSR 176
Query: 180 WAFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICL 239
W + + GI Y G L + Q I LP + + ++P D +C ICL
Sbjct: 177 WGYNIDLMQDYGI----YIYRNG--LNSKQ-------INSLPYYYINSLPEDL-KCSICL 222
Query: 240 EEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNF 299
+ L E T L C H F
Sbjct: 223 NDLQ-------------------------------LNECARTLLL----------CNHTF 241
Query: 300 HIECIDEWLRLNVKCPRCRCSV 321
H CID WL + CP C+ +
Sbjct: 242 HKACIDLWLIRSATCPNCKSPI 263
>gi|413938974|gb|AFW73525.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 419
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
S F + ++R LP C+H FH ECI EWL +V CP CRC++ PN D S+
Sbjct: 131 SEFEDEERLRLLPKCSHAFHPECIGEWLASHVTCPVCRCNLDPNKDTSS 179
>gi|356530111|ref|XP_003533627.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 369
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY+ A Q A + I++LPK++ I ++EF + + D++ G +
Sbjct: 253 LYVVADQEGATKEEIEQLPKYKF-----------IIIKEF----KKEGDIEESSRGIMTE 297
Query: 263 KPLCKLVHALMFLKEH---MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRC 319
++ L++ + S + + ++R LPC H+FH CID+WL +N CP C+
Sbjct: 298 SESETATEHVIALEDAECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLINATCPLCKF 357
Query: 320 SVF 322
++
Sbjct: 358 NIL 360
>gi|402579379|gb|EJW73331.1| hypothetical protein WUBG_15762 [Wuchereria bancrofti]
Length = 204
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLS 328
VR LPCAH+FH++CID+WLR N CP CR +V + D S
Sbjct: 98 VRMLPCAHHFHLKCIDKWLRGNRTCPICRQNVASDEDDS 136
>gi|301111063|ref|XP_002904611.1| transmembrane protein, putative [Phytophthora infestans T30-4]
gi|262095928|gb|EEY53980.1| transmembrane protein, putative [Phytophthora infestans T30-4]
Length = 320
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+R LPCAH+FH EC+DEWL +N CP CR S+F
Sbjct: 268 LRVLPCAHHFHKECVDEWLLVNSTCPTCRKSIF 300
>gi|225445348|ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
++R LPC+H FH EC+D+WL++N CP C+C V N
Sbjct: 378 ELRELPCSHFFHSECVDKWLKINASCPLCKCEVGEN 413
>gi|297738877|emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
++R LPC+H FH EC+D+WL++N CP C+C V N
Sbjct: 358 ELRELPCSHFFHSECVDKWLKINASCPLCKCEVGEN 393
>gi|389582754|dbj|GAB65491.1| hypothetical protein PCYB_062230, partial [Plasmodium cynomolgi
strain B]
Length = 188
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 11 YDGFFLSM-LATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGLASGMG 69
Y+ F L + + S+ + + W + C P+H+W+VV + ++ ++RL F+ L++
Sbjct: 14 YNDFILLLSVCYSIGDIFLQWNDFSKCHKPIHVWLVVSFISIVLYRLSHFLAQYLSNDGD 73
Query: 70 LDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTS----ARDCLPEEGQKWG 125
+ +++ + ++VL + L+PF W ++GT+W CLP W
Sbjct: 74 DLIIYRRNTPPYYINLLVLCV----LFPFFLVWNVVGTVWIYQIIKYTPKCLPRNNHPWF 129
Query: 126 FLIWLLFSY 134
++W++ Y
Sbjct: 130 IVLWIVLCY 138
>gi|356565289|ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 379
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 15/124 (12%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I++L KF+ + T+ E H GN Q +
Sbjct: 261 LYAVADQEGASKEDIEQLSKFKFQRTETN---------EKHAGNT-QGAAGGIMIECDAD 310
Query: 263 KPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
P+ H L + S + + +++R LPC+H+FH C+D+WL +N CP C+ +
Sbjct: 311 SPI---EHVLSDEDAECCICLSAYDDGVELRKLPCSHHFHCACVDKWLHINATCPLCKYN 367
Query: 321 VFPN 324
+ +
Sbjct: 368 ILKS 371
>gi|403331202|gb|EJY64535.1| Zinc finger family protein [Oxytricha trifallax]
Length = 731
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 286 EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA----LSNLRTADSERS 341
E+ + + L C H FH+ C+ WL NV+CP CRC + L+LSA L A ER
Sbjct: 304 EIKKAKKLSCGHIFHLNCLRRWLEQNVQCPTCRCKI--ELELSATQLQTQQLNQAAQERE 361
Query: 342 SASSVVTTTR 351
+A +V+ R
Sbjct: 362 NARAVIQAQR 371
>gi|170571824|ref|XP_001891879.1| hypotetical protein, conserved [Brugia malayi]
gi|158603363|gb|EDP39313.1| hypothetical protein, conserved [Brugia malayi]
Length = 510
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
VR LPCAH+FH++CID+WLR N CP CR +V + D
Sbjct: 406 VRMLPCAHHFHLKCIDKWLRGNRTCPICRQNVASDDD 442
>gi|403367662|gb|EJY83654.1| Zinc finger family protein [Oxytricha trifallax]
Length = 732
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 286 EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA----LSNLRTADSERS 341
E+ + + L C H FH+ C+ WL NV+CP CRC + L+LSA L A ER
Sbjct: 304 EIKKAKKLSCGHIFHLNCLRRWLEQNVQCPTCRCKI--ELELSATQLQTQQLNQAAQERE 361
Query: 342 SASSVVTTTR 351
+A +V+ R
Sbjct: 362 NARAVIQAQR 371
>gi|413938973|gb|AFW73524.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 502
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
S F + ++R LP C+H FH ECI EWL +V CP CRC++ PN D S+
Sbjct: 131 SEFEDEERLRLLPKCSHAFHPECIGEWLASHVTCPVCRCNLDPNKDTSS 179
>gi|326435222|gb|EGD80792.1| hypothetical protein PTSG_01380 [Salpingoeca sp. ATCC 50818]
Length = 341
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 27/43 (62%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
F E VR LPC H FH+ECIDEWL+ CP CR ++ LD
Sbjct: 290 FEENQHVRRLPCRHVFHVECIDEWLQSVPTCPTCRSNITDELD 332
>gi|325179882|emb|CCA14284.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 320
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
++R LPC H+FH CIDEWL LN CP CR S+ D ++LS + S R
Sbjct: 270 KIRLLPCNHHFHSGCIDEWLGLNATCPTCRISI----DETSLSKQKKTASHR 317
>gi|298711205|emb|CBJ32426.1| ring finger protein [Ectocarpus siliculosus]
Length = 203
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+ E ++R LPC+H FH EC+D WL N +CP CR SV P
Sbjct: 162 YEEDDELRILPCSHTFHTECVDGWLEENEECPTCRRSVSPQ 202
>gi|357513019|ref|XP_003626798.1| RING finger protein [Medicago truncatula]
gi|355520820|gb|AET01274.1| RING finger protein [Medicago truncatula]
Length = 316
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP-NLDLSALSNLRTADSE 339
S F +R LP C H FH ECID WLR N+ CP CR S+ P + DL+ + ++DS
Sbjct: 110 SKFRNSDLLRSLPLCCHAFHAECIDTWLRSNLSCPLCRASILPSDSDLAKILRSTSSDSF 169
Query: 340 R 340
R
Sbjct: 170 R 170
>gi|449460475|ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + +++L KF+ + V ++ DV+ P G
Sbjct: 265 LYAVADQEGATKEDVEQLSKFKFRKVENT--------------EKFSTDVQ-EPLGGVMS 309
Query: 263 KPLCKLVHALMFLKEH----MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ L+E + S + + +++R LPC H+FH C+D+WL +N CP C+
Sbjct: 310 ECCTDSPIERPLLQEDAECCICLSAYEDGVELRELPCGHHFHCACVDKWLYINATCPLCK 369
Query: 319 CSVFPNLDLS 328
++ N +L+
Sbjct: 370 YNILKNSNLA 379
>gi|297842825|ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+QVR LPC+H FH++C+D+WL++N CP C+ V
Sbjct: 360 VQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 393
>gi|326523127|dbj|BAJ88604.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 451
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSN-----LRTAD 337
F Q+R LP C+H FH+ECID WL + CP CR S+ DLS + L +AD
Sbjct: 127 FAPDDQLRLLPKCSHAFHLECIDTWLLSHSTCPLCRRSLLAAGDLSPTCSPVLMVLESAD 186
Query: 338 SERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPN----DTDIALQTVEN 393
S R A S + +PS + VR+ GL + +L + D +T E
Sbjct: 187 SPRDLAGSAT----HADGEPSGAA--VRVPGLDGAEEVVEVKLGKFMCVEADAVARTGET 240
Query: 394 GGVLSATQNRIA 405
G +++ N A
Sbjct: 241 DGAGTSSSNANA 252
>gi|83315699|ref|XP_730905.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490777|gb|EAA22470.1| 23281-24001-related [Plasmodium yoelii yoelii]
Length = 272
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 120/322 (37%), Gaps = 72/322 (22%)
Query: 5 GVDFKWYDGFFLSMLATSVIIVAINWKRYHLCTYPLHIWIVVDYTTVFVFRLLMFVDNGL 64
GV + D + + S+ + + W + C P+ +W+V+ + ++ ++RL + L
Sbjct: 9 GVRLSFNDFILIVSVFYSICDIFMQWGEFSKCHKPIQLWLVISFISIVLYRLAHILSQYL 68
Query: 65 ASGMGLDLGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTS----ARDCLPEE 120
++ + Y R ++ +IL +L+PF + W IIGT+W CLP+
Sbjct: 69 SNNNENFII----YRRNGPPYIINAILIFILFPFFFIWNIIGTIWIYQIIKYTPKCLPKN 124
Query: 121 GQKWGFLIWLLFSYCGL-LCIACMSMGKWLTRRQAHSIRAQQGIPVSEYGVLLDMIRVPE 179
W ++W++ Y + L + +S+ + + R I +++
Sbjct: 125 NHPWFIVLWIILCYIWIFLYLFFISLSLYFEYQARLYERRLTNIQPNDF--------FSR 176
Query: 180 WAFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICL 239
W + + GI Y G L + Q I LP + + +P D +C ICL
Sbjct: 177 WGYNIDLMQDYGI----YIYRNG--LNSKQ-------INSLPYYYINNLPEDL-KCSICL 222
Query: 240 EEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNF 299
+ +H + L L C H F
Sbjct: 223 NDL----------------------------------QHNECARTL-------LLCNHTF 241
Query: 300 HIECIDEWLRLNVKCPRCRCSV 321
H CID WL + CP C+ +
Sbjct: 242 HKACIDLWLIRSATCPNCKSPI 263
>gi|326516860|dbj|BAJ96422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 451
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSN-----LRTAD 337
F Q+R LP C+H FH+ECID WL + CP CR S+ DLS + L +AD
Sbjct: 127 FAPDDQLRLLPKCSHAFHLECIDTWLLSHSTCPLCRRSLLAAGDLSPTCSPVLMVLESAD 186
Query: 338 SERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPN----DTDIALQTVEN 393
S R A S + +PS + VR+ GL + +L + D +T E
Sbjct: 187 SPRDLAGSAT----HADGEPSGAA--VRVPGLDGAEEVVEVKLGKFMCVEADAVARTGET 240
Query: 394 GGVLSATQNRIA 405
G +++ N A
Sbjct: 241 DGAGTSSSNANA 252
>gi|224114523|ref|XP_002316784.1| predicted protein [Populus trichocarpa]
gi|222859849|gb|EEE97396.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 26/117 (22%)
Query: 202 GLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTS 261
+ + +A+R A + I LP R KAV TD +E++ V
Sbjct: 198 NMSMGSAERGASDDQISRLPSRRYKAVDTD--------------SEFRNSVD-------- 235
Query: 262 HKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
C A L+ + + + ++ +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 236 ----CDSTVASEDLECCICLAKYKDIEEVRQLPCSHMFHLKCVDQWLRIISCCPLCK 288
>gi|79342958|ref|NP_172736.2| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75335230|sp|Q9LN71.1|RING1_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g12760; AltName:
Full=RING finger protein At1g12760
gi|9502381|gb|AAF88088.1|AC025417_16 T12C24.29 [Arabidopsis thaliana]
gi|22531064|gb|AAM97036.1| unknown protein [Arabidopsis thaliana]
gi|23198142|gb|AAN15598.1| unknown protein [Arabidopsis thaliana]
gi|67037431|gb|AAY63561.1| RING domain protein [Arabidopsis thaliana]
gi|332190803|gb|AEE28924.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 408
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I++L KF+ + + D ++ H +E Q + +
Sbjct: 289 LYAVADQEGASKEDIEQLTKFKFRKL-GDANK--------HTNDEAQGTTEGIMTECGTD 339
Query: 263 KPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
P+ H L+ + S + + ++R LPC H+FH C+D+WL +N CP C+ +
Sbjct: 340 SPI---EHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYN 396
Query: 321 VFPNLDLS 328
+ + +L
Sbjct: 397 ILKSSNLD 404
>gi|328708855|ref|XP_003243816.1| PREDICTED: hypothetical protein LOC100573509 isoform 1
[Acyrthosiphon pisum]
gi|328708857|ref|XP_003243817.1| PREDICTED: hypothetical protein LOC100573509 isoform 2
[Acyrthosiphon pisum]
Length = 760
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + VR LPC H FH++CID+WL N +CP CR +
Sbjct: 697 SDFEDTEDVRRLPCMHLFHVDCIDQWLSSNKRCPICRVDI 736
>gi|15220126|ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis
thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis thaliana]
gi|332198277|gb|AEE36398.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
QVR LPC+H FH++C+D+WL++N CP C+ V
Sbjct: 367 QVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399
>gi|326498537|dbj|BAJ98696.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 21/127 (16%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFT-- 260
LY + Q A E I+++PK++ + V E Q+ G
Sbjct: 254 LYAVSDQEGASEDDIRQIPKYKFRRVDE---------------PEKQSVTMIESSGGIMI 298
Query: 261 ---SHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRC 317
+++P+ K++ A + + S++ + ++R LPC H+FH CID+WL +N CP C
Sbjct: 299 ECGTNQPIEKVL-AAEDAECCICLSVYDDGAELRELPCGHHFHCACIDKWLHINATCPLC 357
Query: 318 RCSVFPN 324
+ +V N
Sbjct: 358 KLNVRKN 364
>gi|357136994|ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++P+++ + + E+ V + G ++
Sbjct: 235 LYAVSDQEGASEDDIRQIPRYKFRRINEP--------EKQSVSMTGSSGGMMIECG--TN 284
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + ++R LPCAH+FH CID+WL +N CP C+ +V
Sbjct: 285 QPIEKVL-AAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKWLHINATCPLCKLNVR 343
Query: 323 PN 324
N
Sbjct: 344 KN 345
>gi|357136992|ref|XP_003570086.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++P+++ + + E+ V + G ++
Sbjct: 255 LYAVSDQEGASEDDIRQIPRYKFRRINEP--------EKQSVSMTGSSGGMMIECG--TN 304
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + ++R LPCAH+FH CID+WL +N CP C+ +V
Sbjct: 305 QPIEKVL-AAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKWLHINATCPLCKLNVR 363
Query: 323 PN 324
N
Sbjct: 364 KN 365
>gi|303288165|ref|XP_003063371.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455203|gb|EEH52507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 228
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E +VR LP C H FH ECIDEWL N CP CR S+
Sbjct: 56 FEEGDEVRALPMCEHAFHKECIDEWLSQNTTCPNCRASL 94
>gi|297797783|ref|XP_002866776.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312611|gb|EFH43035.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 221
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 49/139 (35%), Gaps = 43/139 (30%)
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
A +A Q G + H ++ TA + + +PK R+ + C +CL+
Sbjct: 122 AMLSAVQSQMGAVESQFQEHTDIFDTAISKGLTGDSLDRIPKVRITDTSPEIVSCSVCLQ 181
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNF 299
+F VG VR LP C H F
Sbjct: 182 DFQVGE------------------------------------------TVRSLPQCHHMF 199
Query: 300 HIECIDEWLRLNVKCPRCR 318
H+ CID+WLR + CP CR
Sbjct: 200 HLPCIDKWLRAHASCPLCR 218
>gi|79317862|ref|NP_001031032.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|222424260|dbj|BAH20087.1| AT1G12760 [Arabidopsis thaliana]
gi|332190804|gb|AEE28925.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 337
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I++L KF+ + + H +E Q + +
Sbjct: 218 LYAVADQEGASKEDIEQLTKFKFRKLGD---------ANKHTNDEAQGTTEGIMTECGTD 268
Query: 263 KPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
P+ H L+ + S + + ++R LPC H+FH C+D+WL +N CP C+ +
Sbjct: 269 SPI---EHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYN 325
Query: 321 VFPNLDLS 328
+ + +L
Sbjct: 326 ILKSSNLD 333
>gi|357466367|ref|XP_003603468.1| RING finger protein [Medicago truncatula]
gi|355492516|gb|AES73719.1| RING finger protein [Medicago truncatula]
Length = 81
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNL 325
++R LPC+H FH EC+D+WL++N CP C+ + N+
Sbjct: 18 ELRELPCSHLFHKECVDKWLKINALCPLCKSEIGENV 54
>gi|356518453|ref|XP_003527893.1| PREDICTED: RING-H2 finger protein ATL11-like [Glycine max]
Length = 334
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F EV +R +P C+H FH ECID WL + CP CR ++FP D + ++ D E+
Sbjct: 139 FEEVETLRFIPNCSHVFHSECIDAWLANHSTCPVCRANLFPKPDDPSFDPIQIPDPEQPV 198
Query: 343 ASS 345
SS
Sbjct: 199 ISS 201
>gi|325180789|emb|CCA15199.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 522
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 23/35 (65%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
F E VR L C H FH+ CIDEWLR NV CP C+
Sbjct: 414 FEEEENVRKLNCTHIFHVPCIDEWLRRNVTCPMCK 448
>gi|255537347|ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223549639|gb|EEF51127.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I++L KF+ + V D E+ + Q + +
Sbjct: 263 LYAVADQEGASKEDIEQLSKFKFRRVDND--------EKLTGNGDEQGPLGGVMTECGTD 314
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
P+ + + + + + S + + +++R LPC H+FH C+D+WL +N CP C+ ++
Sbjct: 315 SPV-EHILSEEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 373
Query: 323 PN 324
+
Sbjct: 374 KS 375
>gi|147815560|emb|CAN70531.1| hypothetical protein VITISV_010219 [Vitis vinifera]
Length = 305
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+VR LPC+H FH+EC+D+WL++N +CP C+
Sbjct: 247 EVRELPCSHFFHVECVDKWLKINPRCPLCQ 276
>gi|225426249|ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
gi|297742383|emb|CBI34532.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVR 354
C H FH +CI WLR N CP CRCSVFPN A + + SE + + V
Sbjct: 122 CKHVFHADCIYHWLRTNSTCPLCRCSVFPN--TKAGNPVSPVRSEHPDNQNSNQHRQNVS 179
Query: 355 TQPSSQSYLVRMQGLLSPVHMGNTRLPND 383
+Q ++ VR+ +S G +P D
Sbjct: 180 SQQQEENIGVRLD--ISDSSSGQQMVPTD 206
>gi|387597135|gb|EIJ94755.1| hypothetical protein NEPG_00279, partial [Nematocida parisii ERTm1]
Length = 263
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
+ E Q+R LPC H+FH+ CIDEW ++ CP C+ + P D++ S
Sbjct: 215 YAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPINPLYDIAGTS 262
>gi|387593481|gb|EIJ88505.1| hypothetical protein NEQG_01195 [Nematocida parisii ERTm3]
Length = 259
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
+ E Q+R LPC H+FH+ CIDEW ++ CP C+ + P D++ S
Sbjct: 211 YAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPINPLYDIAGTS 258
>gi|226531600|ref|NP_001147541.1| protein binding protein [Zea mays]
gi|195612076|gb|ACG27868.1| protein binding protein [Zea mays]
Length = 375
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++PK++ + + E+ VG + G ++
Sbjct: 256 LYAVSDQEGASEDDIRQIPKYKFRKMEEP--------EKQSVGVPGSSGGIMIECG--TN 305
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP C+ +V
Sbjct: 306 QPIEKVL-AAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKYNVR 364
Query: 323 PN 324
N
Sbjct: 365 KN 366
>gi|194689606|gb|ACF78887.1| unknown [Zea mays]
gi|413923427|gb|AFW63359.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 375
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++PK++ + + E+ VG + G ++
Sbjct: 256 LYAVSDQEGASEDDIRQIPKYKFRKMEEP--------EKQSVGVPGSSGGIMIECG--TN 305
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP C+ +V
Sbjct: 306 QPIEKVL-AAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKYNVR 364
Query: 323 PN 324
N
Sbjct: 365 KN 366
>gi|225453718|ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 382
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I+ LPK++ + + E + E Q +
Sbjct: 263 LYTVADQEGATKEEIERLPKYKFRRIG----------ESEKLNGEIQESFGGIMTECDTD 312
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
P+ + V + + S + + ++R LPC H FH CID+WL +N CP C+ ++
Sbjct: 313 TPM-EHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNIL 371
Query: 323 PNLDLSA 329
N S
Sbjct: 372 KNASQSG 378
>gi|390340259|ref|XP_799787.3| PREDICTED: uncharacterized protein LOC575286 [Strongylocentrotus
purpuratus]
Length = 1687
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + VR LPC H FH+EC+D+WL N +CP CR +
Sbjct: 1479 SYFEDDEDVRRLPCMHLFHVECVDQWLVTNKRCPICRVDI 1518
>gi|357137002|ref|XP_003570091.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 364
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++P+++ + + E+ V + G ++
Sbjct: 245 LYAVSDQEGASEDDIRQIPRYKFRTMDE--------TEKNSVSLTGSSGGIMIECG--TN 294
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + + +R LPC H+FH CID+WL +N CP C+ +V
Sbjct: 295 QPIEKVL-AAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINATCPLCKLNVR 353
Query: 323 PN 324
N
Sbjct: 354 KN 355
>gi|18411876|ref|NP_567110.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|16648921|gb|AAL24312.1| putative protein [Arabidopsis thaliana]
gi|17978715|gb|AAL47351.1| putative protein [Arabidopsis thaliana]
gi|332646647|gb|AEE80168.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 379
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 273 MFLKEHMSTSLFL----EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
M L E S+ L + +++R LPC H+FH C+D+WLR+N CP C+ ++ N
Sbjct: 315 MLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNILKN 370
>gi|357136998|ref|XP_003570089.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++P+++ + + E+ V + G ++
Sbjct: 255 LYAVSDQEGASEDDIRQIPRYKFRTMDE--------TEKNSVSLTGSSGGIMIECG--TN 304
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + + +R LPC H+FH CID+WL +N CP C+ +V
Sbjct: 305 QPIEKVL-AAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINATCPLCKLNVR 363
Query: 323 PN 324
N
Sbjct: 364 KN 365
>gi|356539808|ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 387
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYG--FT 260
LY Q A + I++L KF+ + + + NE P G T
Sbjct: 269 LYAVTDQEGASKEDIEQLSKFKFRRIES---------------NEKLTGTIQGPVGGIMT 313
Query: 261 SHKPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + HAL + S + + +++R LPC H+FH C+D+WL +N CP C+
Sbjct: 314 ECQADSPIEHALAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCK 373
Query: 319 CSVFPNLDLS 328
++ + +LS
Sbjct: 374 YNILKSSNLS 383
>gi|15239242|ref|NP_201408.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
gi|68565289|sp|Q9FKX5.1|NIPL1_ARATH RecName: Full=NEP1-interacting protein-like 1; AltName:
Full=RING-H2 finger protein ATL27
gi|10177122|dbj|BAB10412.1| unnamed protein product [Arabidopsis thaliana]
gi|46518387|gb|AAS99675.1| At5g66070 [Arabidopsis thaliana]
gi|48958511|gb|AAT47808.1| At5g66070 [Arabidopsis thaliana]
gi|332010772|gb|AED98155.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
Length = 221
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 49/139 (35%), Gaps = 43/139 (30%)
Query: 181 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240
A +A Q G + H ++ TA + + +PK R+ + C +CL+
Sbjct: 122 AMLSAVQSQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQ 181
Query: 241 EFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNF 299
+F VG VR LP C H F
Sbjct: 182 DFQVGE------------------------------------------TVRSLPHCHHMF 199
Query: 300 HIECIDEWLRLNVKCPRCR 318
H+ CID+WLR + CP CR
Sbjct: 200 HLPCIDKWLRRHASCPLCR 218
>gi|326524540|dbj|BAK00653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++PK++ + V E+ G + G ++
Sbjct: 258 LYAVSDQEGASEDDIRQIPKYKFRRVDEP--------EKDSAGATESSGGIMTECG--TN 307
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+P+ K + A + + S + + ++R LPC H+FH CID+WL +N CP C+ S+
Sbjct: 308 QPIEKAL-AAEDAECCICISAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKFSI 365
>gi|6850885|emb|CAB71048.1| putative protein [Arabidopsis thaliana]
Length = 362
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 273 MFLKEHMSTSLFL----EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
M L E S+ L + +++R LPC H+FH C+D+WLR+N CP C+ ++ N
Sbjct: 298 MLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNILKN 353
>gi|348669639|gb|EGZ09461.1| hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae]
Length = 321
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERS 341
+R LPC H+FH +C+DEWL +N CP CR S+F D + TA SE
Sbjct: 268 LRVLPCEHHFHKDCVDEWLLVNSTCPTCRKSIF---DPAGQPETATATSEED 316
>gi|294948132|ref|XP_002785632.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239899611|gb|EER17428.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 1662
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF--PNL 325
V+ LPC HNFH +CID WLR+N +CP C+ + PNL
Sbjct: 195 VKCLPCVHNFHAKCIDHWLRVNHRCPVCKYNKLDPPNL 232
>gi|225453720|ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 365
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I+ LPK++ + + E + E Q +
Sbjct: 246 LYTVADQEGATKEEIERLPKYKFRRIG----------ESEKLNGEIQESFGGIMTECDTD 295
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
P+ + V + + S + + ++R LPC H FH CID+WL +N CP C+ ++
Sbjct: 296 TPM-EHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNIL 354
Query: 323 PNLDLSA 329
N S
Sbjct: 355 KNASQSG 361
>gi|297840183|ref|XP_002887973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333814|gb|EFH64232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I +L KF+ + V H +E Q D +
Sbjct: 253 LYAVAEQEGASKEDIDQLTKFKFRKVGDSVK---------HTVDEEQGDSGGLMTECGTD 303
Query: 263 KPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
P+ H L + S + + ++R LPC H+FH C+D+WL +N CP C+ +
Sbjct: 304 SPV---EHTLPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYN 360
Query: 321 VFPN 324
+ +
Sbjct: 361 ILKS 364
>gi|413923426|gb|AFW63358.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 205
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++PK++ + + E+ VG + G ++
Sbjct: 86 LYAVSDQEGASEDDIRQIPKYKFRKMEEP--------EKQSVGVPGSSGGIMIECG--TN 135
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP C+ +V
Sbjct: 136 QPIEKVL-AAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKYNVR 194
Query: 323 PN 324
N
Sbjct: 195 KN 196
>gi|302758464|ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S + + +++R LPC H+FH CID+WLR+N CP C+ ++ N
Sbjct: 316 SPYDDGVELRELPCNHHFHCSCIDKWLRINATCPLCKFNIIHN 358
>gi|449465805|ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 18/125 (14%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A +A + LPK+R + E G+ V+ T+
Sbjct: 247 LYAVAGQEGATDADLSMLPKYRYRVS-----------NEPSPGDGLMVPVETSSRYLTTE 295
Query: 263 KPL-CKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ L C+ + L S + + +++ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 296 RVLLCEDAECCICL------SPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCKYNI 349
Query: 322 FPNLD 326
N +
Sbjct: 350 LKNCE 354
>gi|359494038|ref|XP_002278195.2| PREDICTED: NEP1-interacting protein 2-like [Vitis vinifera]
Length = 180
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 250 ADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQ----VRGLP-CAHNFHIECI 304
+ K P+ F P H+ + +S ++ L+ + RGLP C H FH+EC+
Sbjct: 100 SGAKGLPHNFIEKLPKSNFCHSNAEMYNEISCTICLQDFKDGEMTRGLPSCRHYFHMECV 159
Query: 305 DEWLRLNVKCPRCR 318
D+WL L+ CP CR
Sbjct: 160 DQWLTLHGSCPMCR 173
>gi|297802754|ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
gi|297315097|gb|EFH45520.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF-PNLDLSA---LSNLRTADSE 339
++R LPC+H FH EC+D+WL++N CP C+ V N DL++ LS+L + +++
Sbjct: 375 ELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQGILSSLSSGEND 429
>gi|313219709|emb|CBY30629.1| unnamed protein product [Oikopleura dioica]
Length = 279
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
VR LPC H FH +CID WLR N CP CR +V
Sbjct: 244 VRTLPCKHYFHSDCIDPWLRRNASCPTCRAAV 275
>gi|297737435|emb|CBI26636.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 250 ADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQ----VRGLP-CAHNFHIECI 304
+ K P+ F P H+ + +S ++ L+ + RGLP C H FH+EC+
Sbjct: 184 SGAKGLPHNFIEKLPKSNFCHSNAEMYNEISCTICLQDFKDGEMTRGLPSCRHYFHMECV 243
Query: 305 DEWLRLNVKCPRCRCSV 321
D+WL L+ CP CR V
Sbjct: 244 DQWLTLHGSCPMCRKDV 260
>gi|302797352|ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S + + +++R LPC H+FH CID+WLR+N CP C+ ++ N
Sbjct: 316 SPYDDGVELRELPCNHHFHCSCIDKWLRINATCPLCKFNIIHN 358
>gi|194707262|gb|ACF87715.1| unknown [Zea mays]
gi|194708318|gb|ACF88243.1| unknown [Zea mays]
Length = 324
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++PK++ + + E+ VG + G ++
Sbjct: 205 LYAVSDQEGASEDDIRQIPKYKFRKMEEP--------EKQSVGVPGSSGGIMIECG--TN 254
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP C+ +V
Sbjct: 255 QPIEKVL-AAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKYNVR 313
Query: 323 PN 324
N
Sbjct: 314 KN 315
>gi|326489907|dbj|BAJ94027.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 717
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH ECIDEWLR CP C+C +
Sbjct: 683 IRTLPCFHKFHKECIDEWLRRKKLCPVCKCGI 714
>gi|357137000|ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++P+++ + + E+ V + G ++
Sbjct: 235 LYAVSDQEGASEDDIRQIPRYKFRTMDE--------TEKNSVSLTGSSGGIMIECG--TN 284
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + + +R LPC H+FH CID+WL +N CP C+ +V
Sbjct: 285 QPIEKVL-AAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINATCPLCKLNVR 343
Query: 323 PN 324
N
Sbjct: 344 KN 345
>gi|378755066|gb|EHY65093.1| hypothetical protein NERG_01539 [Nematocida sp. 1 ERTm2]
Length = 263
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
+ E Q+R LPC H+FH+ CIDEW ++ CP C+ + P D++ S
Sbjct: 215 YAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPINPLYDIAGSS 262
>gi|357137098|ref|XP_003570138.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like
[Brachypodium distachyon]
Length = 382
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 265 LCKLVHALMFLKEHMSTSL----FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRC 319
+CK F+ + S+ F + +R LP C+H FH+ CID WL+ + CP CRC
Sbjct: 148 VCKYKRGDGFVVDGTDCSVCLGEFRDGESLRLLPKCSHAFHLPCIDPWLKSHSSCPLCRC 207
Query: 320 SV-FPNLDLSALSNLRTADSERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNT 378
++ L+ A ++ R +R V+T Y P Q + S G+T
Sbjct: 208 NIAVGELEGRAAASPRQPREDRRDHEFVLTIGDYSPASPRQTREEPAAQPVASSNDQGST 267
Query: 379 R 379
+
Sbjct: 268 K 268
>gi|297743323|emb|CBI36190.3| unnamed protein product [Vitis vinifera]
Length = 920
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+VR LPC+H FH+EC+D+WL++N +CP C+
Sbjct: 253 EVRELPCSHFFHVECVDKWLKINPRCPLCQ 282
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTAD-SERSSASSV 346
++R LPC H FH EC+DEWL++N +CP C+ + S + + + SER + S++
Sbjct: 850 ELRELPCGHFFHKECVDEWLKINARCPLCQSEIARTHGASTFAAGSSQNPSERRTGSAL 908
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 289 QVRGLPC-AHNFHIECIDEWLRLNVKCPRCR 318
++R LPC +H FH+EC+D+WL++ +CP C+
Sbjct: 690 ELRELPCCSHFFHVECVDKWLKIKARCPLCQ 720
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 289 QVRGLPC-AHNFHIECIDEWLRLNVKCPRCR 318
++R LPC +H FH EC+D+WL++ CP C+
Sbjct: 485 ELRELPCCSHFFHAECVDQWLKIKACCPLCQ 515
>gi|356550569|ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ + ++R LPC+H FH+EC+D+WL++N CP C+ V
Sbjct: 372 YADDDELRELPCSHVFHVECVDKWLKINATCPLCKNEV 409
>gi|313227204|emb|CBY22351.1| unnamed protein product [Oikopleura dioica]
Length = 279
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
VR LPC H FH +CID WLR N CP CR +V
Sbjct: 244 VRTLPCKHYFHSDCIDPWLRRNASCPTCRAAV 275
>gi|357136996|ref|XP_003570088.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 360
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S + + ++R LPCAH+FH CID+WL +N CP C+ +V N
Sbjct: 309 SAYDDGAELRELPCAHHFHCACIDKWLHINATCPLCKLNVRKN 351
>gi|296089059|emb|CBI38762.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I+ LPK++ + + E + E Q +
Sbjct: 210 LYTVADQEGATKEEIERLPKYKFRRIG----------ESEKLNGEIQESFGGIMTECDTD 259
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
P+ + V + + S + + ++R LPC H FH CID+WL +N CP C+ ++
Sbjct: 260 TPM-EHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNIL 318
Query: 323 PNLDLSA 329
N S
Sbjct: 319 KNASQSG 325
>gi|392575033|gb|EIW68167.1| hypothetical protein TREMEDRAFT_63337 [Tremella mesenterica DSM
1558]
Length = 424
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 45/116 (38%)
Query: 212 AVEALIQELPKFRLKAVPTDCS---ECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKL 268
A +A+I+ LP+++L + S +CP+C ++F VG+E
Sbjct: 259 ATDAVIEGLPRYKLDEKALETSQFKDCPVCKDDFAVGDE--------------------- 297
Query: 269 VHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
V +PC H FH +C+ WL++N CP CR S+ P+
Sbjct: 298 ---------------------VMRIPCKHIFHPDCLQPWLKVNGSCPVCRFSLVPD 332
>gi|4959044|gb|AAD34209.1|AF069992_1 LIM domain interacting RING finger protein [Mus musculus]
Length = 600
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H FH+ CID WL N CP CR +V
Sbjct: 553 YTEGDKLRKLPCSHEFHVHCIDRWLSENSTCPICRRAVL 591
>gi|357164642|ref|XP_003580120.1| PREDICTED: uncharacterized protein LOC100837137 [Brachypodium
distachyon]
Length = 728
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH ECIDEWLR CP C+C +
Sbjct: 694 IRTLPCFHKFHQECIDEWLRRKKLCPVCKCGI 725
>gi|325182411|emb|CCA16864.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 342
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++E ++R LPC H+FH +C DEWL +N CP CR S++
Sbjct: 280 YVEDEELRLLPCRHHFHKQCADEWLVVNATCPTCRLSIY 318
>gi|323454158|gb|EGB10028.1| hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens]
Length = 360
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FH++C+D+WL +N CP CR S+F
Sbjct: 284 KLRVLPCKHLFHVDCVDQWLSVNATCPLCRKSIF 317
>gi|242056191|ref|XP_002457241.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
gi|241929216|gb|EES02361.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
Length = 408
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F +R LPCAH FH+ECID+WL++N CP C+ +
Sbjct: 340 SKFSNNEDLRELPCAHVFHMECIDKWLQINALCPLCKAEI 379
>gi|221110595|ref|XP_002160653.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like, partial [Hydra
magnipapillata]
Length = 359
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S ++ ++R LPC H+FH +CID+WLR N CP CR V
Sbjct: 313 SEYVNREKLRRLPCTHDFHSKCIDKWLRSNRTCPVCRDDV 352
>gi|19115091|ref|NP_594179.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74638425|sp|Q9C1X4.1|YKW3_SCHPO RecName: Full=Uncharacterized RING finger protein P32A8.03c
gi|13093904|emb|CAC29482.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe]
Length = 513
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 274 FLKEHMSTSLFLEVLQVRG----LPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
+ E ++ +E+ ++ LPC H FH CI WLR+N C CR V PN
Sbjct: 389 LIDEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDPNSQQRN 448
Query: 330 LSNLRTADSERSS--ASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIA 387
++ +A+ S A+ +TT ++S+ Q LS H ++R P D +
Sbjct: 449 NTSTDSANGHNPSNHANPSTSTTNDQGATLRNESFNAASQSNLSSEHGHSSRTPMDDFVD 508
Query: 388 LQTVE 392
+ +E
Sbjct: 509 EEPLE 513
>gi|226288668|gb|EEH44180.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 632
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F++ VR LPC H FH EC+D WL +NV CP CR ++ P +A + R DS
Sbjct: 375 TDDFIKGQDVRLLPCQHKFHPECVDPWL-INVSGTCPLCRVNLNPPDPDNADGSDRDHDS 433
Query: 339 ERSSAS 344
E + S
Sbjct: 434 EDPTRS 439
>gi|147777193|emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
Length = 342
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I+ LPK++ + + E + E Q +
Sbjct: 223 LYTVADQEGATKEEIERLPKYKFRRIG----------ESEKLNGEIQESFGGIMTECDTD 272
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
P+ + V + + S + + ++R LPC H FH CID+WL +N CP C+ ++
Sbjct: 273 TPM-EHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNIL 331
Query: 323 PNLDLSA 329
N S
Sbjct: 332 KNASQSG 338
>gi|225681528|gb|EEH19812.1| RING-7 protein [Paracoccidioides brasiliensis Pb03]
Length = 631
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F++ VR LPC H FH EC+D WL +NV CP CR ++ P +A + R DS
Sbjct: 376 TDDFIKGQDVRLLPCQHKFHPECVDPWL-INVSGTCPLCRVNLNPPDPDNADGSDRDHDS 434
Query: 339 ERSSAS 344
E + S
Sbjct: 435 EDPTRS 440
>gi|383146730|gb|AFG55080.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
Length = 143
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
S F++ ++R LP C+H+FH++CID WL N CP CR S +L A + + A +E
Sbjct: 60 SDFVDGEKLRILPGCSHSFHMDCIDRWLNFNSSCPSCRKSPL-DLRFKASTGVANAAAEA 118
Query: 341 SSASSVVTTTR 351
S +S + + R
Sbjct: 119 SQSSQMRASER 129
>gi|383146716|gb|AFG55073.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146718|gb|AFG55074.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146720|gb|AFG55075.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146722|gb|AFG55076.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146724|gb|AFG55077.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146726|gb|AFG55078.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146728|gb|AFG55079.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146732|gb|AFG55081.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146734|gb|AFG55082.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146738|gb|AFG55084.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146740|gb|AFG55085.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146742|gb|AFG55086.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146744|gb|AFG55087.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146746|gb|AFG55088.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146748|gb|AFG55089.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
gi|383146750|gb|AFG55090.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
Length = 143
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
S F++ ++R LP C+H+FH++CID WL N CP CR S +L A + + A +E
Sbjct: 60 SDFVDGEKLRILPGCSHSFHMDCIDRWLNFNSSCPSCRKSPL-DLRFKASTGVANAAAEA 118
Query: 341 SSASSVVTTTR 351
S +S + + R
Sbjct: 119 SQSSQMRASER 129
>gi|307135837|gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 26/127 (20%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQ-ADVKFYPYGFTS 261
LY A Q A +A + LPK+R + V NE D P +S
Sbjct: 247 LYAVAGQEGATDADLSMLPKYR-----------------YRVSNEPSPGDGLMVPVETSS 289
Query: 262 HKPLCKLVHALMFLKEHMSTSLFL----EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRC 317
L + L+E + L + +++ LPC H+FH CI +WL++N CP C
Sbjct: 290 RY----LTTERVLLREDAECCICLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLC 345
Query: 318 RCSVFPN 324
+ ++ N
Sbjct: 346 KYNILKN 352
>gi|293336813|ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays]
gi|224033719|gb|ACN35935.1| unknown [Zea mays]
gi|414876051|tpg|DAA53182.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 410
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F +R LPCAH FH+ECID+WL++N CP C+ +
Sbjct: 340 SKFSNNEDLRELPCAHVFHMECIDKWLQINALCPLCKAEI 379
>gi|148223081|ref|NP_001082725.1| E3 ubiquitin-protein ligase RNF12-A [Xenopus laevis]
gi|82198038|sp|Q641J8.1|RF12A_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-A; AltName:
Full=RING finger protein 12-A; AltName: Full=XRnf12
gi|51950095|gb|AAH82339.1| XRnf12 protein [Xenopus laevis]
Length = 622
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +HI CID WL N CP CR +V
Sbjct: 575 YTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 613
>gi|361066629|gb|AEW07626.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
Length = 143
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
S F++ ++R LP C+H+FH++CID WL N CP CR S +L A + + A +E
Sbjct: 60 SDFVDGEKLRILPGCSHSFHMDCIDRWLNFNSSCPSCRKSPL-DLRFKASTGVANAAAEA 118
Query: 341 SSASSVVTTTR 351
S +S + + R
Sbjct: 119 SQSSQMRASER 129
>gi|356504060|ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
Length = 366
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F + +R LP C H FH ECIDEWL + CP CR ++ P A++N ++
Sbjct: 118 FEDTETLRLLPKCDHVFHPECIDEWLSSHTTCPVCRANLLPTESEDAIAN--------AN 169
Query: 343 ASSVV----TTTRYVRTQPSS-QSYLVRMQGLLSPVHMGNTRLPNDTDIAL-QTVENGGV 396
A+ VV T TR + +Q + Q+ + PV LP ++L +T+
Sbjct: 170 ANGVVPVPETLTRDIESQNDAVQAAPEQQNAEADPV------LPEPEVVSLDKTLNRNRT 223
Query: 397 LSATQNRIAMGPFS-STGRVLVSP 419
+ NR P S STG LV P
Sbjct: 224 RGSRSNRPRRFPRSHSTGHSLVQP 247
>gi|213626227|gb|AAI69999.1| XRnf12C protein [Xenopus laevis]
Length = 751
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +HI CID WL N CP CR +V
Sbjct: 704 YTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 742
>gi|168693457|ref|NP_001108244.1| E3 ubiquitin-protein ligase RNF12-B [Xenopus laevis]
gi|82208071|sp|Q7T037.1|RF12B_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-B; AltName:
Full=RING finger protein 12-B; AltName: Full=XRnf12B
gi|33411672|dbj|BAC81442.1| XRnf12B [Xenopus laevis]
Length = 757
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +HI CID WL N CP CR +V
Sbjct: 710 YTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 748
>gi|148236424|ref|NP_001084194.1| XRnf12C protein [Xenopus laevis]
gi|33411674|dbj|BAC81443.1| XRnf12C [Xenopus laevis]
Length = 825
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +HI CID WL N CP CR +V
Sbjct: 778 YTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 816
>gi|33411670|dbj|BAC81441.1| XRnf12 [Xenopus laevis]
Length = 616
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +HI CID WL N CP CR +V
Sbjct: 569 YTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 607
>gi|326489497|dbj|BAK01729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++PK++ + V + AD G +
Sbjct: 258 LYAVSDQEGASEDDIRQIPKYKFRRVDEP--------------EKDSADATESSGGIMTE 303
Query: 263 KPLCKLVHALMFLKEH---MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRC 319
+ + + ++ + S + + ++R LPC H+FH CID+WL +N CP C+
Sbjct: 304 CGTNQPIEKALAAEDAECCICISAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKF 363
Query: 320 SV 321
S+
Sbjct: 364 SI 365
>gi|356497216|ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYG--FT 260
LY A Q A + I++L KF+ + + + NE P G T
Sbjct: 267 LYAVADQEGASKEDIEQLSKFKFRRIES---------------NEKLTGTIQGPVGGIMT 311
Query: 261 SHKPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + H L + S + + +++R LPC H+FH C+D+WL +N CP C+
Sbjct: 312 ECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCK 371
Query: 319 CSVFPNLDLS 328
++ + LS
Sbjct: 372 YNILKSNTLS 381
>gi|357136383|ref|XP_003569784.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 409
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
S F +R LPCAH FH+ECID+WL++N CP C+
Sbjct: 340 SKFSNNEDLRELPCAHVFHMECIDKWLKINALCPLCK 376
>gi|22329099|ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis thaliana]
gi|19698907|gb|AAL91189.1| putative protein [Arabidopsis thaliana]
gi|20465641|gb|AAM20289.1| unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 453
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF-PNLDLSA---LSNLRTADSER 340
++R LPC+H FH EC+D+WL++N CP C+ V N DL++ L++L + +++
Sbjct: 375 ELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQGILTSLSSGENDN 430
>gi|356568312|ref|XP_003552356.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 375
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGF--- 259
LY+ A A + I +LPK++ + + +EF + + D++ G
Sbjct: 259 LYVVADPEGATKEEIDQLPKYKFRII-----------KEF----KKEGDIEESSRGIMTE 303
Query: 260 TSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRC 319
T + + V AL + + S + ++R LPC H+FH CID+WL +N CP C+
Sbjct: 304 TESETAAEHVIALEDAECCICLSAYDNDAELRELPCNHHFHCTCIDKWLLINATCPLCKF 363
Query: 320 SVF 322
++
Sbjct: 364 NIL 366
>gi|226504074|ref|NP_001152639.1| RING-H2 finger protein ATL5H [Zea mays]
gi|195658427|gb|ACG48681.1| RING-H2 finger protein ATL5H precursor [Zea mays]
gi|413936544|gb|AFW71095.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 201
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 55/164 (33%), Gaps = 64/164 (39%)
Query: 182 FEAAGQEMR-GIGQDTAAYHPGLYLTAAQREA--------VEALIQELPKFRLKAVPTDC 232
F AAG R +D AA+ L T A A V+A I LP F A P C
Sbjct: 58 FSAAGYVSRWCAAEDGAAHALALPTTMATPAARGRAVCGLVDAAIDALPAFAY-ARPATC 116
Query: 233 SE-----------CPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMST 281
CP+CLEE G
Sbjct: 117 GAESSSKSGRLALCPVCLEEVEAGE----------------------------------- 141
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
VR LP C H FH+ECID WL + CP CRC V P
Sbjct: 142 -------MVRQLPACGHLFHVECIDMWLHSHASCPLCRCDVSPQ 178
>gi|357142575|ref|XP_003572618.1| PREDICTED: RING-H2 finger protein ATL7-like [Brachypodium
distachyon]
Length = 234
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 291 RGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL--SNLRTADSERSSASSV 346
R PC H FHIECID WL N CP CR S+ P ++ ++L +E S+ SV
Sbjct: 113 RIPPCGHTFHIECIDHWLSKNTTCPLCRVSLLPAPKAVSIEPTDLEAQTAEEDSSLSV 170
>gi|294874940|ref|XP_002767163.1| ubiquitin-protein ligase CIP8, putative [Perkinsus marinus ATCC
50983]
gi|239868612|gb|EEQ99880.1| ubiquitin-protein ligase CIP8, putative [Perkinsus marinus ATCC
50983]
Length = 262
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
V+ LPC HNFH +CID WLR+N +CP C+
Sbjct: 217 VKCLPCVHNFHAKCIDHWLRVNHRCPVCK 245
>gi|225707048|gb|ACO09370.1| Zinc finger protein 364 [Osmerus mordax]
Length = 307
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 53/154 (34%), Gaps = 49/154 (31%)
Query: 202 GLYLTAAQREAVEALIQELPKFRLKAVPTDCS-ECPICLEEFHVGNEWQADVKFYPYGFT 260
G + + A + +I LP R+ TDC ECP+C EEF V
Sbjct: 199 GQFESTGPPPAEKEMISSLPTVRISREQTDCRLECPVCREEFSVEE-------------- 244
Query: 261 SHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
VR LPC H FH +CI WL L+ CP CR S
Sbjct: 245 ----------------------------SVRQLPCLHYFHSDCIVPWLELHDTCPVCRKS 276
Query: 321 VFPNLDLSALSNLRTADSERSSASSVVTTTRYVR 354
L + N SE A S+ + R
Sbjct: 277 ------LDGVDNSAKPTSEPPEALSIRAEPQEER 304
>gi|413922760|gb|AFW62692.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 331
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP--------NLDLSALSNLRTADSER 340
+R LP CAH FH+ECID WLR +V CP CR V + + ++ A +ER
Sbjct: 156 LRLLPKCAHAFHVECIDTWLRAHVSCPLCRADVMDPGAAAADADAEQPPGTDAADASAER 215
Query: 341 SSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRL 380
S++++ T + Q + +R+Q + P H + L
Sbjct: 216 SASNTPTTELERLDQQANEHHQELRVQ-IDQPDHSSSLEL 254
>gi|3063710|emb|CAA18601.1| putative protein [Arabidopsis thaliana]
gi|7270164|emb|CAB79977.1| putative protein [Arabidopsis thaliana]
Length = 495
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF-PNLDLSA---LSNLRTADSER 340
++R LPC+H FH EC+D+WL++N CP C+ V N DL++ L++L + +++
Sbjct: 375 ELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQGILTSLSSGENDN 430
>gi|195157042|ref|XP_002019405.1| GL12252 [Drosophila persimilis]
gi|194115996|gb|EDW38039.1| GL12252 [Drosophila persimilis]
Length = 1345
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERS 341
SLF VR LPC H FH +C+D+WL N CP CR + ++ AL++ D+ +
Sbjct: 1283 SLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMANDALNSSGVTDAANA 1342
Query: 342 SA 343
+A
Sbjct: 1343 AA 1344
>gi|115439113|ref|NP_001043836.1| Os01g0673900 [Oryza sativa Japonica Group]
gi|113533367|dbj|BAF05750.1| Os01g0673900, partial [Oryza sativa Japonica Group]
Length = 86
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH ECID+WLR+ + CP C+ V
Sbjct: 54 LRRLPCLHKFHKECIDKWLRMRISCPVCKSEV 85
>gi|198454685|ref|XP_001359674.2| GA19959 [Drosophila pseudoobscura pseudoobscura]
gi|198132908|gb|EAL28824.2| GA19959 [Drosophila pseudoobscura pseudoobscura]
Length = 1343
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERS 341
SLF VR LPC H FH +C+D+WL N CP CR + ++ AL++ D+ +
Sbjct: 1281 SLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMANDALNSSGVTDAANA 1340
Query: 342 SA 343
+A
Sbjct: 1341 AA 1342
>gi|348583071|ref|XP_003477298.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RNF6-like [Cavia porcellus]
Length = 641
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLS 328
S ++ ++R LPC H FHI CID WL N CP CR V+ D++
Sbjct: 592 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVYAGSDIA 638
>gi|328772613|gb|EGF82651.1| hypothetical protein BATDEDRAFT_86130 [Batrachochytrium
dendrobatidis JAM81]
Length = 496
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%)
Query: 293 LPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRY 352
LPC H FH CI WL+LN CP CR S+ N D N + E ++S+ T
Sbjct: 336 LPCKHVFHPLCITSWLKLNGTCPVCRYSLVDNSDSFPTGNRSASHPEAPTSSTATTAQND 395
Query: 353 VRTQPSSQSYLV 364
R P + + V
Sbjct: 396 NRAAPGTTTNTV 407
>gi|414885021|tpg|DAA61035.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 80
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH++C+D+WL++N CP C+ +
Sbjct: 16 ELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 48
>gi|384499255|gb|EIE89746.1| hypothetical protein RO3G_14457 [Rhizopus delemar RA 99-880]
Length = 131
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
+V LPC H FH +CI WL+LN CP CR SV P
Sbjct: 80 KVIQLPCEHIFHDDCIKPWLKLNSTCPVCRKSVLP 114
>gi|357512567|ref|XP_003626572.1| RING-H2 finger protein ATL1E [Medicago truncatula]
gi|355501587|gb|AES82790.1| RING-H2 finger protein ATL1E [Medicago truncatula]
Length = 370
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSN 332
+R +P C H FH CIDEWLR+N CP CR S FP+ L +S+
Sbjct: 327 IRCIPECKHCFHAHCIDEWLRMNATCPVCRNSPFPSHSLLQISS 370
>gi|224092390|ref|XP_002309588.1| predicted protein [Populus trichocarpa]
gi|222855564|gb|EEE93111.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
F ++R LPC+H FH EC+D+WL++N CP C+ V
Sbjct: 366 FANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEV 403
>gi|168029222|ref|XP_001767125.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681621|gb|EDQ68046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 271
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 18/91 (19%)
Query: 267 KLVHALMFLKEHMSTSLFLEVLQ----VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
K+V E ++ S+ LE + +R LPC H FH CID WLR CP C+
Sbjct: 194 KIVQGEQKTLEELTCSVCLEQVVEGEIIRTLPCVHQFHAACIDLWLRQQATCPVCK---- 249
Query: 323 PNLDLSALSNLRTADSERSSASSVVTTTRYV 353
R E S ASS TTT ++
Sbjct: 250 ----------FRLGGPETSMASSAATTTAFI 270
>gi|79332615|ref|NP_001032158.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
gi|332010773|gb|AED98156.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
Length = 245
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 43/120 (35%)
Query: 200 HPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGF 259
H ++ TA + + +PK R+ + C +CL++F VG
Sbjct: 165 HTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQVGET------------ 212
Query: 260 TSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
VR LP C H FH+ CID+WLR + CP CR
Sbjct: 213 ------------------------------VRSLPHCHHMFHLPCIDKWLRRHASCPLCR 242
>gi|224056493|ref|XP_002298883.1| predicted protein [Populus trichocarpa]
gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 26/117 (22%)
Query: 202 GLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTS 261
+ + +A+R A + I LP +R KA T+ EF + + + S
Sbjct: 246 NMNMGSAERGASDDQISSLPSWRYKAADTN--------SEFRNNADCNSTI-------AS 290
Query: 262 HKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
C + A KE +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 291 EDLECCICLAKYKDKE-----------EVRKLPCSHMFHLKCVDQWLRIISCCPLCK 336
>gi|297721811|ref|NP_001173269.1| Os03g0149700 [Oryza sativa Japonica Group]
gi|27261476|gb|AAN87742.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706205|gb|ABF94000.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|255674209|dbj|BAH91997.1| Os03g0149700 [Oryza sativa Japonica Group]
Length = 311
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F+E +VR LP C+H FHI+CID WL+ N +CP CR V
Sbjct: 133 SEFVERERVRLLPNCSHAFHIDCIDTWLQGNARCPFCRSDV 173
>gi|449268981|gb|EMC79795.1| E3 ubiquitin-protein ligase rnf12-A [Columba livia]
Length = 595
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 548 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 586
>gi|307203731|gb|EFN82691.1| RING finger protein 165 [Harpegnathos saltator]
Length = 695
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + VR LPC H FHI+C+D+WL N +CP CR +
Sbjct: 644 SEFEDCENVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDI 683
>gi|255563598|ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis]
Length = 323
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 26/117 (22%)
Query: 202 GLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTS 261
+ + +A+R A + I LP ++ KAV T+ +E +++ +
Sbjct: 228 NMQMGSAERGASDDQISRLPSWKYKAVDTN--------------SEVASNIDCTS-TLAN 272
Query: 262 HKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
P C + A KE +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 273 DDPECCICLAKYKDKE-----------EVRQLPCSHMFHLKCVDQWLRIISCCPLCK 318
>gi|125542425|gb|EAY88564.1| hypothetical protein OsI_10037 [Oryza sativa Indica Group]
Length = 315
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F+E +VR LP C+H FHI+CID WL+ N +CP CR V
Sbjct: 133 SEFVERERVRLLPNCSHAFHIDCIDTWLQGNARCPFCRSDV 173
>gi|431901142|gb|ELK08267.1| E3 ubiquitin-protein ligase RLIM [Pteropus alecto]
Length = 607
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 560 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 598
>gi|443722532|gb|ELU11354.1| hypothetical protein CAPTEDRAFT_180387 [Capitella teleta]
Length = 341
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV--FPNLDLSALSNLRTADSE 339
S F + +VR LPC H FHI C+D WL N +CP CR + D + +SN D++
Sbjct: 264 SDFEDSDEVRRLPCMHLFHIGCVDTWLSSNRRCPICRVDIETASKGDATDVSNAHNDDAD 323
Query: 340 RSSASSVVTTTRYVRTQPSSQ 360
V T V +PS+Q
Sbjct: 324 EVD----VMDTPRVFIEPSAQ 340
>gi|30017522|gb|AAP12944.1| putative ring-H2 zinc finger protein [Oryza sativa Japonica Group]
gi|108708650|gb|ABF96445.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
Length = 280
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
R LP C H FH+EC+D WLR N CP CRC+V
Sbjct: 116 SARVLPRCGHGFHVECVDMWLRSNSTCPLCRCAVI 150
>gi|213624561|gb|AAI71271.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
gi|213627806|gb|AAI71269.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 592 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 630
>gi|62859463|ref|NP_001016091.1| E3 ubiquitin-protein ligase RNF12 [Xenopus (Silurana) tropicalis]
gi|123884087|sp|Q07G42.1|RNF12_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF12; AltName: Full=RING
finger protein 12
gi|115530795|emb|CAL49424.1| ring finger protein 12 [Xenopus (Silurana) tropicalis]
Length = 639
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 592 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 630
>gi|395859921|ref|XP_003802274.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Otolemur garnettii]
Length = 619
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 572 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 610
>gi|297817430|ref|XP_002876598.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
gi|297322436|gb|EFH52857.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
Length = 377
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+++R LPC H+FH C+D+WLR+N CP C+ ++ N
Sbjct: 332 VELRELPCRHHFHSLCVDKWLRINATCPLCKFNILKN 368
>gi|218192997|gb|EEC75424.1| hypothetical protein OsI_11932 [Oryza sativa Indica Group]
Length = 280
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
R LP C H FH+EC+D WLR N CP CRC+V
Sbjct: 116 SARVLPRCGHGFHVECVDMWLRSNSTCPLCRCAV 149
>gi|213404144|ref|XP_002172844.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
gi|212000891|gb|EEB06551.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
Length = 492
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 75/202 (37%), Gaps = 59/202 (29%)
Query: 154 AHSIRAQQGIPVSEYGVLLDMIRVPE---WAFEAAGQEMRGIGQDTAAYHPGLYLTAAQR 210
A Q P + +G L ++ P W + + + T+A H A
Sbjct: 287 AQPANGQGFNPATVFGELFNLAGNPGDYVWGARGLDDIISQLMEQTSAQH-------APP 339
Query: 211 EAVEALIQELPKFRLKAVPTDCS-ECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLV 269
A E++I++LP ++ D EC +CLE F G+ DV
Sbjct: 340 PAPESVIEQLPVEKVPQNLVDEEYECTVCLENFKTGD----DV----------------- 378
Query: 270 HALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
VR LPC H FH +CI WLR+N C CR V PN S
Sbjct: 379 --------------------VR-LPCKHYFHEQCIKPWLRVNGTCAVCRAPVDPNAAAS- 416
Query: 330 LSNLRTADSERSSASSVVTTTR 351
T+D +R A+ ++T
Sbjct: 417 -----TSDRQRGPANDSSSSTN 433
>gi|326924458|ref|XP_003208444.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Meleagris
gallopavo]
Length = 593
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 546 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 584
>gi|224043224|ref|XP_002192257.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Taeniopygia guttata]
Length = 664
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPCAH FHI CID WL N CP CR V
Sbjct: 623 KLRQLPCAHEFHIHCIDRWLSENSTCPICRQPVL 656
>gi|417403353|gb|JAA48484.1| Putative e3 ubiquitin-protein ligase rlim [Desmodus rotundus]
Length = 617
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 570 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 608
>gi|47078289|ref|NP_035406.3| E3 ubiquitin-protein ligase RLIM [Mus musculus]
gi|259016319|sp|Q9WTV7.2|RLIM_MOUSE RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12
gi|15277964|gb|AAH12960.1| Ring finger protein, LIM domain interacting [Mus musculus]
gi|148682142|gb|EDL14089.1| ring finger protein 12, isoform CRA_a [Mus musculus]
gi|148682143|gb|EDL14090.1| ring finger protein 12, isoform CRA_a [Mus musculus]
Length = 600
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 237 ICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMST-----SLFLEVLQVR 291
+ L +F + NE D + P G T + + L + + T + + E ++R
Sbjct: 505 LSLAQFFLLNE---DDEDQPRGLTKEQ-IDNLAMRSFGENDALKTCSVCITEYTEGNKLR 560
Query: 292 GLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
LPC+H +H+ CID WL N CP CR +V
Sbjct: 561 KLPCSHEYHVHCIDRWLSENSTCPICRRAVL 591
>gi|395546427|ref|XP_003775089.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Sarcophilus harrisii]
Length = 618
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 571 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 609
>gi|149757525|ref|XP_001505027.1| PREDICTED: e3 ubiquitin-protein ligase RLIM isoform 1 [Equus
caballus]
Length = 616
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 569 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 607
>gi|432120081|gb|ELK38694.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 612
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 565 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 603
>gi|224098363|ref|XP_002199379.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Taeniopygia
guttata]
Length = 595
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 548 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 586
>gi|255552959|ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein, putative [Ricinus communis]
Length = 421
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 25/30 (83%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++R LPC+H FH++C+D+WL++N CP C+
Sbjct: 373 ELRELPCSHVFHVDCVDKWLKINASCPLCK 402
>gi|26325250|dbj|BAC26379.1| unnamed protein product [Mus musculus]
Length = 600
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 237 ICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMST-----SLFLEVLQVR 291
+ L +F + NE D + P G T + + L + + T + + E ++R
Sbjct: 505 LSLAQFFLLNE---DDEDQPRGLTKEQ-IDNLAMRSFGENDALKTCSVCITEYTEGNKLR 560
Query: 292 GLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
LPC+H +H+ CID WL N CP CR +V
Sbjct: 561 KLPCSHEYHVHCIDRWLSENSTCPICRRAVL 591
>gi|355716637|gb|AES05675.1| ring finger protein, LIM domain interacting [Mustela putorius furo]
Length = 625
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 578 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 616
>gi|345807549|ref|XP_859444.2| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 3 [Canis lupus
familiaris]
Length = 625
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 578 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 616
>gi|407927723|gb|EKG20610.1| hypothetical protein MPH_02137 [Macrophomina phaseolina MS6]
Length = 572
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F VR LPC H FH ECID WL LNV CP CR ++ P DS
Sbjct: 408 TEEFEPGQDVRVLPCDHKFHPECIDPWL-LNVSGTCPLCRINLNPTSPTDENGPDGNGDS 466
Query: 339 ERSSAS 344
R SAS
Sbjct: 467 TRRSAS 472
>gi|334349289|ref|XP_001362311.2| PREDICTED: hypothetical protein LOC100009881 isoform 2 [Monodelphis
domestica]
Length = 349
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 302 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 340
>gi|114689178|ref|XP_001141975.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
troglodytes]
gi|114689180|ref|XP_001142065.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
troglodytes]
gi|410212840|gb|JAA03639.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410212842|gb|JAA03640.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259648|gb|JAA17790.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259650|gb|JAA17791.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294556|gb|JAA25878.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294558|gb|JAA25879.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337801|gb|JAA37847.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337803|gb|JAA37848.1| ring finger protein, LIM domain interacting [Pan troglodytes]
Length = 620
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 573 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 611
>gi|410988853|ref|XP_004000691.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Felis catus]
Length = 621
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 574 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 612
>gi|311276513|ref|XP_003135236.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Sus scrofa]
gi|335306207|ref|XP_003360418.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Sus scrofa]
gi|350595776|ref|XP_003484178.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 623
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 576 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 614
>gi|301787517|ref|XP_002929173.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
gi|281350879|gb|EFB26463.1| hypothetical protein PANDA_019274 [Ailuropoda melanoleuca]
Length = 625
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 578 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 616
>gi|195995807|ref|XP_002107772.1| hypothetical protein TRIADDRAFT_18741 [Trichoplax adhaerens]
gi|190588548|gb|EDV28570.1| hypothetical protein TRIADDRAFT_18741, partial [Trichoplax
adhaerens]
Length = 49
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNL 325
++R LPC+H FH C+D+WLR + CP CR ++ P +
Sbjct: 13 KIRELPCSHGFHARCVDKWLRQHNSCPICRENINPTV 49
>gi|12850423|dbj|BAB28712.1| unnamed protein product [Mus musculus]
Length = 600
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 237 ICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMST-----SLFLEVLQVR 291
+ L +F + NE D + P G T + + L + + T + + E ++R
Sbjct: 505 LSLAQFFLLNE---DDEDQPRGLTKEQ-IDNLAMRSFGENDALKTCSVCITEYTEGNKLR 560
Query: 292 GLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
LPC+H +H+ CID WL N CP CR +V
Sbjct: 561 KLPCSHEYHVHCIDRWLSENSTCPICRRAVL 591
>gi|308081650|ref|NP_001183781.1| uncharacterized LOC100502374 [Zea mays]
gi|238014516|gb|ACR38293.1| unknown [Zea mays]
gi|413937282|gb|AFW71833.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 246
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSVFP-------NLDLSALSNLRTADSERS 341
PC H FHI CID WL N CP CR S+ P LDL A +TA E S
Sbjct: 123 PCGHTFHINCIDHWLSTNTTCPLCRVSLLPAPKATSTGLDLEA----QTAVEEES 173
>gi|34452684|ref|NP_057204.2| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|34452686|ref|NP_899196.1| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|426396456|ref|XP_004064457.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Gorilla
gorilla gorilla]
gi|426396458|ref|XP_004064458.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Gorilla
gorilla gorilla]
gi|143811451|sp|Q9NVW2.3|RLIM_HUMAN RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12;
AltName: Full=Renal carcinoma antigen NY-REN-43
gi|15426504|gb|AAH13357.1| Ring finger protein, LIM domain interacting [Homo sapiens]
gi|119619045|gb|EAW98639.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|119619046|gb|EAW98640.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|123993649|gb|ABM84426.1| ring finger protein 12 [synthetic construct]
gi|123999977|gb|ABM87497.1| ring finger protein 12 [synthetic construct]
gi|306921343|dbj|BAJ17751.1| ring finger protein, LIM domain interacting [synthetic construct]
Length = 624
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 577 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
>gi|397507950|ref|XP_003824440.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
paniscus]
gi|397507952|ref|XP_003824441.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
paniscus]
Length = 622
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 575 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 613
>gi|388514763|gb|AFK45443.1| unknown [Lotus japonicus]
Length = 145
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNL 325
++R LPC+H FH +C+D+WL++N CP C+ + N+
Sbjct: 97 ELRELPCSHFFHKDCVDKWLKINASCPLCKSEIGENV 133
>gi|356554344|ref|XP_003545507.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 440
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNL 325
++R LPC+H FH +C+D+WL++N CP C+ V NL
Sbjct: 377 ELRELPCSHLFHKDCVDKWLKINALCPLCKSDVGENL 413
>gi|426257257|ref|XP_004022246.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Ovis aries]
Length = 610
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 563 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 601
>gi|387019685|gb|AFJ51960.1| e3 ubiquitin-protein ligase RNF12-A-like [Crotalus adamanteus]
Length = 607
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 560 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 598
>gi|354488554|ref|XP_003506433.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
gi|344243810|gb|EGV99913.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 603
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 556 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 594
>gi|332239684|ref|XP_003269028.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Nomascus
leucogenys]
Length = 622
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 575 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 613
>gi|297710376|ref|XP_002831863.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pongo
abelii]
Length = 624
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 577 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
>gi|296235819|ref|XP_002763060.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Callithrix
jacchus]
Length = 620
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 573 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 611
>gi|440910350|gb|ELR60156.1| E3 ubiquitin-protein ligase RLIM [Bos grunniens mutus]
Length = 611
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 564 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 602
>gi|300796903|ref|NP_001179251.1| E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|296470869|tpg|DAA12984.1| TPA: ring finger protein, LIM domain interacting-like isoform 1
[Bos taurus]
gi|296470870|tpg|DAA12985.1| TPA: ring finger protein, LIM domain interacting-like isoform 2
[Bos taurus]
Length = 611
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 564 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 602
>gi|403291724|ref|XP_003936919.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Saimiri boliviensis
boliviensis]
Length = 642
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 595 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 633
>gi|115446717|ref|NP_001047138.1| Os02g0557300 [Oryza sativa Japonica Group]
gi|113536669|dbj|BAF09052.1| Os02g0557300 [Oryza sativa Japonica Group]
gi|215695052|dbj|BAG90243.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 286 EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS--NLRTADSERSSA 343
E LQ R PC H FHI+CID WL N CP CR S+ P+ +++ +L E +S+
Sbjct: 110 ERLQ-RIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTASIDPVDLEAQTVEENSS 168
Query: 344 SSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQT---VENGGVLSAT 400
V + + + Q QG P H +T + + T VE G S T
Sbjct: 169 LDVQYQEGRI-DENTRQEDQTLQQGSEGPTHQAEEN--EETSVRVTTEPQVEAEGSPSTT 225
>gi|67846064|ref|NP_001020063.1| E3 ubiquitin-protein ligase RLIM [Rattus norvegicus]
gi|392355774|ref|XP_003752129.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Rattus
norvegicus]
gi|66910661|gb|AAH97491.1| Ring finger protein 12 [Rattus norvegicus]
gi|149055585|gb|EDM07169.1| ring finger protein 12, isoform CRA_b [Rattus norvegicus]
Length = 603
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 556 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 594
>gi|327288909|ref|XP_003229167.1| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like [Anolis
carolinensis]
Length = 586
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 539 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 577
>gi|7022528|dbj|BAA91632.1| unnamed protein product [Homo sapiens]
Length = 624
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 577 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
>gi|195539967|gb|AAI67972.1| Unknown (protein for IMAGE:7068139) [Danio rerio]
Length = 711
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ + ++R LPCAH FHI CID WL N CP CR +
Sbjct: 668 YAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPIL 706
>gi|388453379|ref|NP_001253768.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|402910577|ref|XP_003917944.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Papio anubis]
gi|383412441|gb|AFH29434.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412443|gb|AFH29435.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412445|gb|AFH29436.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412447|gb|AFH29437.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412449|gb|AFH29438.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412451|gb|AFH29439.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
Length = 624
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 577 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
>gi|344282004|ref|XP_003412765.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Loxodonta
africana]
Length = 609
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 562 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 600
>gi|444518192|gb|ELV12009.1| E3 ubiquitin-protein ligase RLIM [Tupaia chinensis]
Length = 558
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 511 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 549
>gi|297722203|ref|NP_001173465.1| Os03g0398600 [Oryza sativa Japonica Group]
gi|255674569|dbj|BAH92193.1| Os03g0398600 [Oryza sativa Japonica Group]
Length = 267
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
R LP C H FH+EC+D WLR N CP CRC+V
Sbjct: 103 SARVLPRCGHGFHVECVDMWLRSNSTCPLCRCAV 136
>gi|326679661|ref|XP_003201353.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Danio rerio]
Length = 750
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ + ++R LPCAH FHI CID WL N CP CR +
Sbjct: 707 YAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPIL 745
>gi|149411042|ref|XP_001505684.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like
[Ornithorhynchus anatinus]
Length = 595
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 548 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 586
>gi|10944884|emb|CAC14228.1| RING zinc finger LIM domain binding protein [Homo sapiens]
Length = 624
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 577 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
>gi|399529262|gb|AFP44689.1| hypothetical protein [Eragrostis tef]
Length = 252
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 47/136 (34%)
Query: 190 RGIGQDTAAYHPGLYLT---AAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGN 246
R +D A +H + + A++R EA I+ +P FR ++ ++ EC +CL EF G
Sbjct: 48 RSDHRDVAHHHLHIVVQEQPASRRGLEEAAIRRIPTFRYQS-GSNKQECAVCLAEFRDGE 106
Query: 247 EWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECID 305
++R LP C H FHI+CID
Sbjct: 107 ------------------------------------------RLRQLPPCLHAFHIDCID 124
Query: 306 EWLRLNVKCPRCRCSV 321
WL+ CP CR +V
Sbjct: 125 AWLQSTANCPLCRAAV 140
>gi|242041429|ref|XP_002468109.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
gi|241921963|gb|EER95107.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
Length = 280
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 55/143 (38%), Gaps = 30/143 (20%)
Query: 189 MRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKA------VPTDCSECPICLEEF 242
+R + D + + P + E I LP F+ K P S+ P L
Sbjct: 140 LRALDADNSPHTPSMS---------EEEINSLPVFKYKVQAQQGNAPAQKSDGPSQLSVS 190
Query: 243 HVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQV----RGLPCAHN 298
G+ + TS P ++ ++ S+ LE + V R LPC H
Sbjct: 191 STGSGNEKKQDGLKSDGTSKTP-----------EDELTCSVCLEQVAVGDLLRSLPCLHQ 239
Query: 299 FHIECIDEWLRLNVKCPRCRCSV 321
FH+ CID WLR CP C+ V
Sbjct: 240 FHVNCIDPWLRQQGTCPICKHQV 262
>gi|242061970|ref|XP_002452274.1| hypothetical protein SORBIDRAFT_04g022820 [Sorghum bicolor]
gi|241932105|gb|EES05250.1| hypothetical protein SORBIDRAFT_04g022820 [Sorghum bicolor]
Length = 236
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSVFP-------NLDLSA 329
PC H FHI CID WL N CP CR S+ P +LDL A
Sbjct: 117 PCGHTFHISCIDHWLSTNTTCPLCRVSLLPAPKATSIDLDLEA 159
>gi|297836244|ref|XP_002886004.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297331844|gb|EFH62263.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 398
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
S F +V +R LP C H FHI CID+WL + CP CR V DLS L N
Sbjct: 134 SKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNVEDDLSVLGN-------- 185
Query: 341 SSASSVVTTTRYVRTQPSS-QSYLVRMQG 368
SS+S + R + S + Y+ R +G
Sbjct: 186 SSSSLRIMNQSETREEDSRLEIYIEREEG 214
>gi|18413629|ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName:
Full=RING finger protein At4g11680
gi|16323218|gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110 [Arabidopsis thaliana]
gi|66865946|gb|AAY57607.1| RING finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 390
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 41/137 (29%)
Query: 203 LYLTAAQREAVEALIQELPKFRL-------------KAVPTDCSECPICLEEFHVGNEWQ 249
LY A Q A + I ++PKFR + + T+C G +
Sbjct: 279 LYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTEC------------GTDSP 326
Query: 250 ADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLR 309
+ P LC+ + + +++R LPC H+FH CID+WL
Sbjct: 327 IERSLSPEDAECCICLCE----------------YEDGVELRELPCNHHFHCTCIDKWLH 370
Query: 310 LNVKCPRCRCSVFPNLD 326
+N +CP C+ ++ N +
Sbjct: 371 INSRCPLCKFNILKNAN 387
>gi|5360113|gb|AAD42875.1|AF155109_1 putative ring zinc finger protein NY-REN-43 antigen [Homo sapiens]
gi|189054525|dbj|BAG37298.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 436 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 474
>gi|302792094|ref|XP_002977813.1| hypothetical protein SELMODRAFT_443606 [Selaginella moellendorffii]
gi|300154516|gb|EFJ21151.1| hypothetical protein SELMODRAFT_443606 [Selaginella moellendorffii]
Length = 395
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 45/114 (39%), Gaps = 45/114 (39%)
Query: 209 QREAVEALIQELPKFRLKAVPTDCSE-CPICLEEFHVGNEWQADVKFYPYGFTSHKPLCK 267
QR A +A I LP +AV TD SE C ICLE VG E
Sbjct: 326 QRGASQARIDALPVS--EAVETDKSEPCSICLE-VPVGGE-------------------- 362
Query: 268 LVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH ECID WL+ CP C+ SV
Sbjct: 363 ---------------------EIRRLPCLHGFHKECIDTWLQRRANCPVCKASV 395
>gi|291411188|ref|XP_002721870.1| PREDICTED: ring finger protein, LIM domain interacting [Oryctolagus
cuniculus]
Length = 612
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 565 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 603
>gi|356561942|ref|XP_003549235.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 441
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNL 325
++R LPC+H FH +C+D+WL++N CP C+ V NL
Sbjct: 378 ELRELPCSHLFHKDCVDKWLKINALCPLCKSDVGENL 414
>gi|335305810|ref|XP_001924902.3| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 635
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ E ++R LPC+H FHI CID WL N CP CR +
Sbjct: 588 YTEGNKIRILPCSHEFHIHCIDRWLAENSTCPICRGEI 625
>gi|293333937|ref|NP_001169753.1| uncharacterized protein LOC100383634 [Zea mays]
gi|223975755|gb|ACN32065.1| unknown [Zea mays]
gi|224031459|gb|ACN34805.1| unknown [Zea mays]
gi|413939252|gb|AFW73803.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTAD 337
++R LPCAH FH +C+D+WL++N CP C+ + + S S+ R +D
Sbjct: 344 ELRELPCAHCFHKDCVDKWLKINALCPLCKSEI---VSSSGTSDARQSD 389
>gi|67968828|dbj|BAE00771.1| unnamed protein product [Macaca fascicularis]
Length = 483
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 436 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 474
>gi|345480478|ref|XP_003424157.1| PREDICTED: hypothetical protein LOC100678661 [Nasonia vitripennis]
Length = 612
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F E VR LPC H FHI+C+D+WL N CP CR +
Sbjct: 561 SEFEENENVRRLPCMHLFHIDCVDQWLSTNSCCPICRVDI 600
>gi|298711234|emb|CBJ32454.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 123
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FH C+D WL +N CP CR F
Sbjct: 66 ELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCF 99
>gi|222623063|gb|EEE57195.1| hypothetical protein OsJ_07142 [Oryza sativa Japonica Group]
Length = 176
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS--NLRTADSERSSASSVVTTTR 351
PC H FHI+CID WL N CP CR S+ P+ +++ +L E +S+ V
Sbjct: 60 PCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTASIDPVDLEAQTVEENSSLDVQYQEG 119
Query: 352 YVRTQPSSQSYLVRMQGLLSPVHMG 376
+ + + Q QG P H
Sbjct: 120 RI-DENTRQEDQTLQQGSEGPTHQA 143
>gi|410914034|ref|XP_003970493.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Takifugu
rubripes]
Length = 661
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 614 YAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 652
>gi|383856916|ref|XP_003703952.1| PREDICTED: uncharacterized protein LOC100880939 [Megachile
rotundata]
Length = 625
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + VR LPC H FHI+C+D+WL N +CP CR +
Sbjct: 574 SEFEDCESVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDI 613
>gi|328776000|ref|XP_001122053.2| PREDICTED: hypothetical protein LOC726305 [Apis mellifera]
Length = 630
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + VR LPC H FHI+C+D+WL N +CP CR +
Sbjct: 579 SEFEDCESVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDI 618
>gi|189527584|ref|XP_686027.3| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like isoform 1
[Danio rerio]
Length = 632
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 585 YAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 623
>gi|326680221|ref|XP_001923015.2| PREDICTED: hypothetical protein LOC561841 [Danio rerio]
Length = 474
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H++H++CID WL+ N CP CR V
Sbjct: 435 RLRMLPCLHDYHVKCIDRWLKENATCPICRADV 467
>gi|414875730|tpg|DAA52861.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 511
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+VR LP C+H FH++CID WLR CP CR V P
Sbjct: 155 KVRALPGCSHVFHVDCIDAWLRSRTTCPVCRAEVRPK 191
>gi|242086112|ref|XP_002443481.1| hypothetical protein SORBIDRAFT_08g020240 [Sorghum bicolor]
gi|241944174|gb|EES17319.1| hypothetical protein SORBIDRAFT_08g020240 [Sorghum bicolor]
Length = 387
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 259 FTSHKPLCKLVHALMFLKEHMST-----SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNV 312
F + PL + AL L ++ S F ++R LP C H FH CID WLR N
Sbjct: 135 FIASLPLFTMASALAALPKNSPDCAVCLSPFDASAELRLLPACRHAFHAACIDAWLRTNP 194
Query: 313 KCPRCRCSVFPNL 325
CP CR +V P L
Sbjct: 195 VCPICRSTVSPPL 207
>gi|405967974|gb|EKC33083.1| Protein regulator of cytokinesis 1 [Crassostrea gigas]
Length = 1813
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 256 PYGFTSHKPLCKLVHALMFLKEHMSTSL-----------FLEVLQVRGLPCAHNFHIECI 304
P G T KP + + A F KE+ + + F +R LPC+H FH +C+
Sbjct: 1731 PKGLT--KPEIEQLPAYRFNKENHHSDMDQTSCVVCMCDFENRQLLRVLPCSHEFHAKCV 1788
Query: 305 DEWLRLNVKCPRCRCSV 321
D+WL+ N CP CR
Sbjct: 1789 DKWLKTNRTCPICRADA 1805
>gi|350420241|ref|XP_003492446.1| PREDICTED: hypothetical protein LOC100747900 [Bombus impatiens]
Length = 626
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + VR LPC H FHI+C+D+WL N +CP CR +
Sbjct: 575 SEFEDCESVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDI 614
>gi|340713250|ref|XP_003395158.1| PREDICTED: hypothetical protein LOC100651676 [Bombus terrestris]
Length = 631
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + VR LPC H FHI+C+D+WL N +CP CR +
Sbjct: 580 SEFEDCESVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDI 619
>gi|414884510|tpg|DAA60524.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 93
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+++R LPC H+FH CID+WL +N CP C+
Sbjct: 50 VELRELPCNHHFHCSCIDKWLHINATCPLCK 80
>gi|359475158|ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like [Vitis vinifera]
Length = 396
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 16/87 (18%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF---------------PNLDLSALSNL 333
VR LP C+H FH++CID WLR + CP CR +F P+LD + L ++
Sbjct: 168 VRVLPVCSHAFHVDCIDIWLRSHANCPLCRAGIFRHESPFIPVMAARIRPSLDDAILESI 227
Query: 334 RTADSERSSASSVVTTTRYVRTQPSSQ 360
++ S T T V +PS +
Sbjct: 228 LLEPLSEAAPESETTVTEIVPAEPSPR 254
>gi|224056495|ref|XP_002298884.1| predicted protein [Populus trichocarpa]
gi|222846142|gb|EEE83689.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 26/117 (22%)
Query: 202 GLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTS 261
+ + +A+R A + I LP +R KA T+ EF + + + S
Sbjct: 76 NMNMGSAERGASDDQISSLPSWRYKAADTN--------SEFRNNADCNSTI-------AS 120
Query: 262 HKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
C + A KE +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 121 EDLECCICLAKYKDKE-----------EVRKLPCSHMFHLKCVDQWLRIISCCPLCK 166
>gi|332025030|gb|EGI65217.1| E3 ubiquitin-protein ligase arkadia-C [Acromyrmex echinatior]
Length = 687
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + +VR LPC H FHI+C+D WL N +CP CR +
Sbjct: 635 SEFEDCERVRRLPCMHLFHIDCVDRWLCTNKRCPICRVDI 674
>gi|452823709|gb|EME30717.1| hypothetical protein Gasu_19590 [Galdieria sulphuraria]
Length = 286
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 57/161 (35%), Gaps = 50/161 (31%)
Query: 167 EYGVLLDMIRVPEWAFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQE------L 220
+Y LL++ R+P + EA + ++G D P + + +QE +
Sbjct: 169 DYEALLELDRLP--STEALQEFLQGASDDLIERIPSYIFVQPDQNLAKNELQENTRQSSV 226
Query: 221 PKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMS 280
P F K C ICLE + G
Sbjct: 227 PSFAPKENEDTAMSCSICLEAYVDGE---------------------------------- 252
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
Q+R LPC H FH C+D+WLR +CP C+ ++
Sbjct: 253 --------QLRVLPCMHQFHSLCVDKWLRRYARCPICKFAI 285
>gi|388511883|gb|AFK44003.1| unknown [Medicago truncatula]
Length = 371
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL 333
VR +P C H FH +CIDEWLR+NV CP CR S P+ A SN+
Sbjct: 327 VRCIPECKHCFHADCIDEWLRMNVTCPVCRNSPAPSPLNVASSNV 371
>gi|357495165|ref|XP_003617871.1| RING finger protein [Medicago truncatula]
gi|355519206|gb|AET00830.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 202 GLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTS 261
+ + ++ + A + I +LP +R K + +GN+ ++ KF +
Sbjct: 244 NMNIASSNKGASDEQISQLPSWRHKEPHAT---------KLELGNDSESIEKF-----IN 289
Query: 262 HKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
P C + A KE +VR LPC+H FH+EC+D+WL++ CP C+
Sbjct: 290 EDPECCICLAKYKDKE-----------EVRQLPCSHVFHLECVDQWLKIISCCPLCK 335
>gi|358345841|ref|XP_003636983.1| RING finger protein [Medicago truncatula]
gi|355502918|gb|AES84121.1| RING finger protein [Medicago truncatula]
Length = 222
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL 333
VR +P C H FH +CIDEWLR+NV CP CR S P+ A SN+
Sbjct: 178 VRCIPECKHCFHADCIDEWLRMNVTCPVCRNSPAPSPLNVASSNV 222
>gi|357495163|ref|XP_003617870.1| RING finger protein [Medicago truncatula]
gi|355519205|gb|AET00829.1| RING finger protein [Medicago truncatula]
Length = 337
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 202 GLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTS 261
+ + ++ + A + I +LP +R K + +GN+ ++ KF +
Sbjct: 241 NMNIASSNKGASDEQISQLPSWRHKEPHAT---------KLELGNDSESIEKF-----IN 286
Query: 262 HKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
P C + A KE +VR LPC+H FH+EC+D+WL++ CP C+
Sbjct: 287 EDPECCICLAKYKDKE-----------EVRQLPCSHVFHLECVDQWLKIISCCPLCK 332
>gi|358349275|ref|XP_003638664.1| RING finger protein [Medicago truncatula]
gi|355504599|gb|AES85802.1| RING finger protein [Medicago truncatula]
Length = 371
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL 333
VR +P C H FH +CIDEWLR+NV CP CR S P+ A SN+
Sbjct: 327 VRCIPECKHCFHADCIDEWLRMNVTCPVCRNSPAPSPLNVASSNV 371
>gi|294950509|ref|XP_002786665.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239900957|gb|EER18461.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 408
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH CIDEWLR N CP C+ +V
Sbjct: 362 LRVLPCSHVFHANCIDEWLRRNTDCPICKDNV 393
>gi|313226923|emb|CBY22068.1| unnamed protein product [Oikopleura dioica]
Length = 385
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 270 HALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK-CPRCRCSVFPNLDLS 328
HA F + F ++R LPC H +H CID WL N K CP C+ V P+ D
Sbjct: 217 HASRFESCAICIEEFKAGEKIRELPCKHGYHKICIDPWLTSNRKVCPLCKAVVLPSSDDE 276
Query: 329 ALSNLRTA-----------DSERS----SASSVVTTTRYVRTQPSSQSYLVRMQGLLSPV 373
N + D ER+ +A S + T R PS SY + G ++PV
Sbjct: 277 NSDNEDSPLIRPEGPELHDDEERTVGWAAAFSRSSGTHRARG-PSVSSY-TSLDGEVNPV 334
Query: 374 HMGNTRLPNDTDIALQ---TVENG 394
+ + + T I+ + +E+G
Sbjct: 335 YAEDNTMNTSTTISSEQETPIEDG 358
>gi|432878751|ref|XP_004073396.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oryzias
latipes]
Length = 602
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 555 YAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 593
>gi|449495146|ref|XP_004159747.1| PREDICTED: RING-H2 finger protein ATL80-like [Cucumis sativus]
Length = 180
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 46/117 (39%)
Query: 206 TAAQREAVEALIQELPKFRLKAVPTD---CSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
+A R + ++Q LPKFR K+ D +EC ICL EF
Sbjct: 59 ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEF-------------------- 98
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
LE ++R LP C H FH+ C+D WL + CP CR
Sbjct: 99 ----------------------LEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 133
>gi|440631784|gb|ELR01703.1| hypothetical protein GMDG_00079 [Geomyces destructans 20631-21]
Length = 506
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 272 LMFLKEHMSTSL----FLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFP-- 323
L L EH+ S+ F + VR LPC H +H CID WL LNV CP CR + P
Sbjct: 313 LETLDEHLGCSICTEDFTKGEDVRVLPCNHQYHPACIDPWL-LNVSGTCPLCRVDLRPVR 371
Query: 324 -NLDLSALSNLRTADSERSSASSVVTTTRYVR 354
NL S S+ AD + + V +R R
Sbjct: 372 SNLSASEPSSPTDADQMPAVPAETVHQSRVQR 403
>gi|218190978|gb|EEC73405.1| hypothetical protein OsI_07660 [Oryza sativa Indica Group]
Length = 176
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
PC H FHI+CID WL N CP CR S+ P+ +++
Sbjct: 60 PCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTASID 97
>gi|449456961|ref|XP_004146217.1| PREDICTED: RING-H2 finger protein ATL80-like [Cucumis sativus]
Length = 181
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 46/117 (39%)
Query: 206 TAAQREAVEALIQELPKFRLKAVPTD---CSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
+A R + ++Q LPKFR K+ D +EC ICL EF
Sbjct: 59 ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEF-------------------- 98
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
LE ++R LP C H FH+ C+D WL + CP CR
Sbjct: 99 ----------------------LEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 133
>gi|357625903|gb|EHJ76189.1| eIF2B-beta protein [Danaus plexippus]
Length = 1060
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPCAH FH +C+D+WLR N CP CR
Sbjct: 1021 LRVLPCAHEFHAKCVDKWLRSNRTCPICR 1049
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVK-FYPYG--- 258
LY + Q A E I+++P+++ + TD E + DV P+G
Sbjct: 261 LYAVSDQEGASEDDIRQIPRYKFRR--TDEPE--------------KQDVDPMGPFGGIM 304
Query: 259 --FTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPR 316
+++P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP
Sbjct: 305 TECGTNQPIEKVL-AAEDAECCICLSAYDDGAELRELPCGHHFHCTCIDKWLHINATCPL 363
Query: 317 CR 318
C+
Sbjct: 364 CK 365
>gi|15225285|ref|NP_179593.1| putative RING-H2 finger protein ATL12 [Arabidopsis thaliana]
gi|68565334|sp|Q9SL78.1|ATL12_ARATH RecName: Full=Putative RING-H2 finger protein ATL12; Flags:
Precursor
gi|4580469|gb|AAD24393.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330251863|gb|AEC06957.1| putative RING-H2 finger protein ATL12 [Arabidopsis thaliana]
Length = 390
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTA 336
S F +V +R LP C H FHI CID+WL + CP CR V DLS L N T+
Sbjct: 129 SKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSSTS 184
>gi|47222931|emb|CAF99087.1| unnamed protein product [Tetraodon nigroviridis]
Length = 687
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 640 YAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 678
>gi|169616396|ref|XP_001801613.1| hypothetical protein SNOG_11369 [Phaeosphaeria nodorum SN15]
gi|111059957|gb|EAT81077.1| hypothetical protein SNOG_11369 [Phaeosphaeria nodorum SN15]
Length = 166
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWL-RLNVKCPRCRCSVFPNLDLS 328
F E Q+RGL C+H FH+ C+DEW R N CP C ++ P ++
Sbjct: 104 FAEDAQIRGLRCSHAFHVHCLDEWFSRFNEFCPLCHRTIIPGKKVA 149
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVK-FYPYGFT- 260
LY + Q A E I+++P+++ + TD E + DV P+G
Sbjct: 263 LYAVSDQEGASEDDIRQIPRYKFRR--TDEPE--------------KQDVDPMGPFGGIM 306
Query: 261 ----SHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPR 316
+++P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP
Sbjct: 307 IECGTNQPIEKVL-AAEDAECCICLSAYDDSAELRELPCGHHFHCTCIDKWLHINATCPL 365
Query: 317 CR 318
C+
Sbjct: 366 CK 367
>gi|15234955|ref|NP_192753.1| RING-H2 finger protein ATL7 [Arabidopsis thaliana]
gi|68565338|sp|Q9SN28.1|ATL7_ARATH RecName: Full=RING-H2 finger protein ATL7
gi|4538979|emb|CAB39767.1| putative protein [Arabidopsis thaliana]
gi|7267711|emb|CAB78138.1| putative protein [Arabidopsis thaliana]
gi|21689651|gb|AAM67447.1| unknown protein [Arabidopsis thaliana]
gi|332657448|gb|AEE82848.1| RING-H2 finger protein ATL7 [Arabidopsis thaliana]
Length = 236
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVF--PNLDLSALSNLRTADSERSSASSVVTTTRY 352
C H FH+ECID WL + CP CR S+ P+LDLS S + E S+
Sbjct: 130 CGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGE------- 182
Query: 353 VRTQPSSQS 361
TQP SQS
Sbjct: 183 ASTQPDSQS 191
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVK-FYPYG--- 258
LY + Q A E I+++P+++ + TD E + DV P+G
Sbjct: 263 LYAVSDQEGASEDDIRQIPRYKFRR--TDEPE--------------KQDVDPMGPFGGIM 306
Query: 259 --FTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPR 316
+++P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP
Sbjct: 307 IECGTNQPIEKVL-AAEDAECCICLSAYDDSAELRELPCGHHFHCTCIDKWLHINATCPL 365
Query: 317 CR 318
C+
Sbjct: 366 CK 367
>gi|225555637|gb|EEH03928.1| RING-7 finger domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 636
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F++ VR LPC H FH EC+D WL +NV CP CR ++ N + + TA
Sbjct: 390 TDDFVKGQDVRLLPCKHKFHPECVDPWL-INVSGTCPLCRVNL--NTQEPDIDSDDTATP 446
Query: 339 ERSSASSVVTTTRYVRTQPSSQ------SYLVRMQGLLSPVHMGNT 378
+S +S T+ + PS L RMQ P H N+
Sbjct: 447 ASTSRASTPTSQPAAQPNPSHHHQSRRLDMLRRMQRSSEP-HQANS 491
>gi|357135901|ref|XP_003569546.1| PREDICTED: uncharacterized protein LOC100832865 [Brachypodium
distachyon]
Length = 430
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+R LPC H FH ECID WLR+ CP C+ SV
Sbjct: 398 LRHLPCMHKFHKECIDRWLRMKTLCPVCKSSVI 430
>gi|348516947|ref|XP_003445998.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oreochromis
niloticus]
Length = 675
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 628 YAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 666
>gi|118380272|ref|XP_001023300.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305067|gb|EAS03055.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 358
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 276 KEHMSTSLFLEVLQ----VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
+E S+ LE +Q VR L C H FHI+CI +WL LN KCP CR + P
Sbjct: 305 QEQTICSICLEDIQKNKRVRQLNCGHIFHIKCIAQWLSLNCKCPYCR-DILP 355
>gi|356571242|ref|XP_003553788.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
max]
Length = 506
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCS 320
+R +P CAH FH ECIDEWLR+N CP CR S
Sbjct: 461 IRCIPECAHCFHAECIDEWLRMNSTCPVCRNS 492
>gi|195112014|ref|XP_002000571.1| GI22448 [Drosophila mojavensis]
gi|193917165|gb|EDW16032.1| GI22448 [Drosophila mojavensis]
Length = 1503
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
SLF VR LPC H FH +C+D+WL N CP CR + ++ AL
Sbjct: 1434 SLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMAKDAL 1482
>gi|29367335|gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
Length = 250
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYG---- 258
LY + Q A E I+++P+++ + E Q + P+G
Sbjct: 131 LYAVSDQEGASEDDIRQIPRYKFRRTDE---------------PEKQTADETGPFGGIMT 175
Query: 259 -FTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRC 317
+++P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP C
Sbjct: 176 ECGTNQPIEKVL-APEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLC 234
Query: 318 R 318
+
Sbjct: 235 K 235
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+LE ++R LPCAH FH C+D WL++N CP C+
Sbjct: 380 YLEDDEMRELPCAHFFHAVCVDRWLKINATCPLCK 414
>gi|20160647|dbj|BAB89592.1| zinc finger (C3HC4-type RING finger) family protein-like [Oryza
sativa Japonica Group]
gi|125572517|gb|EAZ14032.1| hypothetical protein OsJ_03958 [Oryza sativa Japonica Group]
Length = 189
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
F E +V+ LP C H FH EC+D WLR CP CR S+ P
Sbjct: 134 FEEGEKVKALPLCGHGFHPECVDAWLRSRPSCPLCRSSLLP 174
>gi|361067921|gb|AEW08272.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
Length = 135
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 44/111 (39%)
Query: 208 AQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCK 267
A R AVEA+ K + + +D S+C +CLEEF +G+E
Sbjct: 41 ASRSAVEAMA--AVKISQEHLSSDLSQCAVCLEEFELGSE-------------------- 78
Query: 268 LVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
R +PC H FH +CI WL+L+ CP CR
Sbjct: 79 ----------------------AREMPCKHMFHSDCIQPWLKLHSSCPVCR 107
>gi|359482955|ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
gi|297743322|emb|CBI36189.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ + ++R LPC H FH+EC+D+WL++N CP C+ V
Sbjct: 340 YADNEELRELPCCHFFHVECVDKWLKINALCPLCKFEV 377
>gi|195395880|ref|XP_002056562.1| GJ11010 [Drosophila virilis]
gi|194143271|gb|EDW59674.1| GJ11010 [Drosophila virilis]
Length = 1477
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
SLF VR LPC H FH +C+D+WL N CP CR + ++ AL
Sbjct: 1407 SLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMAKDAL 1455
>gi|125528257|gb|EAY76371.1| hypothetical protein OsI_04302 [Oryza sativa Indica Group]
Length = 188
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
F E +V+ LP C H FH EC+D WLR CP CR S+ P
Sbjct: 133 FEEGEKVKALPLCGHGFHPECVDAWLRSRPSCPLCRSSLLP 173
>gi|195446140|ref|XP_002070646.1| GK10924 [Drosophila willistoni]
gi|194166731|gb|EDW81632.1| GK10924 [Drosophila willistoni]
Length = 1411
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
SLF VR LPC H FH +C+D+WL N CP CR + ++ AL
Sbjct: 1343 SLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMAKDAL 1391
>gi|74007249|ref|XP_855008.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like [Canis lupus
familiaris]
Length = 625
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ E ++R LPC+H FH+ CID WL N CP CR V
Sbjct: 578 YTEGNRLRILPCSHEFHVHCIDHWLSENSTCPICRGQV 615
>gi|255712795|ref|XP_002552680.1| KLTH0C10604p [Lachancea thermotolerans]
gi|238934059|emb|CAR22242.1| KLTH0C10604p [Lachancea thermotolerans CBS 6340]
Length = 515
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 42/108 (38%)
Query: 291 RGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTT 350
+ LPC H H+ C+ W+ + CP CR SVF + AL N A S +SV
Sbjct: 335 KKLPCNHCLHLGCLKSWMERSQTCPICRVSVFDSKGNVALPNQNAAQQPISEDASVAQQP 394
Query: 351 RYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLS 398
+ +S S G L V N P + +N G +
Sbjct: 395 LSAANESNSTSLASTHTGSLGAVSSSNPNFPTWYTFPVTLSDNDGAVD 442
>gi|307170860|gb|EFN62971.1| RING finger protein 165 [Camponotus floridanus]
Length = 709
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + VR LPC H FHI+C+D WL N +CP CR +
Sbjct: 658 SEFEDCESVRRLPCMHLFHIDCVDRWLCTNKRCPICRVDI 697
>gi|255551132|ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein, putative [Ricinus communis]
Length = 437
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC+H FH +C+D+WL++N CP C+ V
Sbjct: 374 ELRELPCSHFFHKDCVDKWLKINASCPLCKTEV 406
>gi|302800686|ref|XP_002982100.1| hypothetical protein SELMODRAFT_59303 [Selaginella moellendorffii]
gi|300150116|gb|EFJ16768.1| hypothetical protein SELMODRAFT_59303 [Selaginella moellendorffii]
Length = 147
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSN 332
+ E +R LP C H FH++CID W+RL CP CR S P + +S
Sbjct: 89 YREAEMLRVLPDCRHVFHVQCIDSWMRLQATCPMCRTSPLPTPQATPIST 138
>gi|255556167|ref|XP_002519118.1| ring finger protein, putative [Ricinus communis]
gi|223541781|gb|EEF43329.1| ring finger protein, putative [Ricinus communis]
Length = 402
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F E VR LP C+H FH++CID WLR + CP CR +F
Sbjct: 159 FEENDYVRTLPVCSHAFHVDCIDIWLRSHANCPLCRARIF 198
>gi|297603205|ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group]
gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group]
gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group]
Length = 267
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYG---- 258
LY + Q A E I+++P+++ + E Q + P+G
Sbjct: 148 LYAVSDQEGASEDDIRQIPRYKFRRTDE---------------PEKQTADETGPFGGIMT 192
Query: 259 -FTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRC 317
+++P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP C
Sbjct: 193 ECGTNQPIEKVL-APEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLC 251
Query: 318 R 318
+
Sbjct: 252 K 252
>gi|449433191|ref|XP_004134381.1| PREDICTED: uncharacterized protein LOC101205482 [Cucumis sativus]
Length = 803
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +CID WL+ CP C+CS+
Sbjct: 771 IRHLPCLHKFHKDCIDPWLQRRTSCPVCKCSI 802
>gi|302821069|ref|XP_002992199.1| hypothetical protein SELMODRAFT_186618 [Selaginella moellendorffii]
gi|300139966|gb|EFJ06696.1| hypothetical protein SELMODRAFT_186618 [Selaginella moellendorffii]
Length = 160
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSN 332
+ E +R LP C H FH++CID W+RL CP CR S P + +S
Sbjct: 98 YREAEMLRVLPDCRHVFHVQCIDSWMRLQATCPMCRTSPLPTPQATPIST 147
>gi|302775586|ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
+R L C H+FH++C+D+WL++N CP C+ V D S + A+ R++
Sbjct: 340 LRELSCTHHFHVDCVDKWLKINASCPLCKLDVGGANDQSGNAAGNEANEARAA 392
>gi|224143048|ref|XP_002324833.1| predicted protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC+H FH +C+D+WL++N CP C+ V
Sbjct: 371 ELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 403
>gi|301118484|ref|XP_002906970.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108319|gb|EEY66371.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 180
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 264 PLCKLVHALMFLKEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRC 319
P+ + ++++ E+ S ++ L V QV R +PC H FH +CID WL+ +CP C+
Sbjct: 117 PIITVTYSMLKASENASCTVCLNVFQVDAPVRMMPCFHRFHPQCIDPWLQEKGRCPICKF 176
Query: 320 SVF 322
F
Sbjct: 177 PAF 179
>gi|405967730|gb|EKC32861.1| E3 ubiquitin-protein ligase arkadia-B [Crassostrea gigas]
Length = 735
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
VR LPC H FHI C+D+WL N KCP CR +
Sbjct: 693 VRRLPCMHLFHIPCVDQWLTTNKKCPICRVDI 724
>gi|356507782|ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 385
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNL 325
++R LPC+H FH +C+D+WL++N CP C+ V N+
Sbjct: 322 ELRELPCSHLFHKDCVDKWLKINALCPLCKSEVSENV 358
>gi|348512116|ref|XP_003443589.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oreochromis
niloticus]
Length = 772
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+++ ++R LPC+H FH+ CID WL N CP CR +
Sbjct: 729 YVQGNKLRRLPCSHEFHVHCIDRWLSENNTCPICRQPIL 767
>gi|125541404|gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSV 346
++R LPC H FH EC+D+WL++N CP C+ + S+ T+D+ RS + +
Sbjct: 341 ELRELPCTHCFHKECVDKWLKINALCPLCKSEI--------ASSSGTSDTRRSDHTDI 390
>gi|14714485|gb|AAH10369.1| RNF111 protein [Homo sapiens]
gi|119597960|gb|EAW77554.1| ring finger protein 111, isoform CRA_a [Homo sapiens]
Length = 137
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 255 YPYGFTSHKPLCK-----LVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLR 309
YP+ + K CK K + S+ E VR LPC H FH C+D+WL
Sbjct: 58 YPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLI 117
Query: 310 LNVKCPRCRCSV 321
N KCP CR +
Sbjct: 118 TNKKCPICRVDI 129
>gi|449487516|ref|XP_004157665.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis
sativus]
Length = 259
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +CID WL+ CP C+CS+
Sbjct: 227 IRHLPCLHKFHKDCIDPWLQRRTSCPVCKCSI 258
>gi|47496914|dbj|BAD19963.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497724|dbj|BAD19789.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 102
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLS 328
VR +P C H FH+ECID WL + CP CRC + P D++
Sbjct: 43 VREMPSCKHLFHVECIDMWLHSHRTCPMCRCDLSPPRDVA 82
>gi|383146736|gb|AFG55083.1| Pinus taeda anonymous locus 0_7221_01 genomic sequence
Length = 143
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
S F++ ++R LP C+H+FH++CID WL N CP CR S +L + + A +E
Sbjct: 60 SDFVDGEKLRILPGCSHSFHMDCIDRWLNFNSSCPSCRKSPL-DLRFKPSTGVANAAAEA 118
Query: 341 SSASSVVTTTR 351
S +S + + R
Sbjct: 119 SQSSQMRVSER 129
>gi|356514046|ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 380
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I++L KF+ + T+ E GN Q +
Sbjct: 262 LYAVADQEGASKEDIEQLSKFKFQRTETN---------EKLAGNT-QGAAGGIMIECDAD 311
Query: 263 KPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
P+ H L + S + + +++R LPC H+FH C+D+WL +N CP C+ +
Sbjct: 312 SPI---EHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDKWLHINATCPLCKYN 368
Query: 321 VFPN 324
+ +
Sbjct: 369 ILKS 372
>gi|194901950|ref|XP_001980514.1| GG17197 [Drosophila erecta]
gi|190652217|gb|EDV49472.1| GG17197 [Drosophila erecta]
Length = 1251
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
+LF +VR LPC H FH +C+D+WL N CP CR + ++ AL+
Sbjct: 1187 TLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPNDALA 1236
>gi|255564721|ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Ricinus communis]
gi|223537443|gb|EEF39071.1| RING-H2 finger protein ATL3K, putative [Ricinus communis]
Length = 374
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLS 328
+R +P C H FH+ECIDEWL++N CP CR S P D S
Sbjct: 332 LRCIPECKHCFHVECIDEWLKMNSSCPVCRNSPSPLHDRS 371
>gi|293333734|ref|NP_001167658.1| RING-H2 finger protein ATL1G [Zea mays]
gi|195604898|gb|ACG24279.1| RING-H2 finger protein ATL1G [Zea mays]
Length = 145
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSVFP-------NLDLSA 329
PC H FHI CID WL N CP CR S+ P LDL A
Sbjct: 23 PCGHTFHINCIDHWLSTNTTCPLCRVSLLPAPKATSTGLDLEA 65
>gi|15227513|ref|NP_178400.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|3461824|gb|AAC32918.1| hypothetical protein [Arabidopsis thaliana]
gi|330250559|gb|AEC05653.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 535
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 293 LPCAHNFHIECIDEWLRLNVKCPRCR 318
LPC H +H+EC+++WL+++ CP+CR
Sbjct: 497 LPCKHKYHLECVEKWLKIHTSCPQCR 522
>gi|357127647|ref|XP_003565490.1| PREDICTED: RING-H2 finger protein ATL5-like [Brachypodium
distachyon]
Length = 210
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
+VR LP C H FH+EC+D WLR CP CR P +L
Sbjct: 127 KVRELPNCGHVFHVECVDAWLRSRTTCPLCRAGAEPETELKG 168
>gi|212720930|ref|NP_001131408.1| uncharacterized protein LOC100192737 [Zea mays]
gi|194691444|gb|ACF79806.1| unknown [Zea mays]
gi|194704676|gb|ACF86422.1| unknown [Zea mays]
gi|223973993|gb|ACN31184.1| unknown [Zea mays]
gi|238011664|gb|ACR36867.1| unknown [Zea mays]
gi|413937281|gb|AFW71832.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 240
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSVFP-------NLDLSA 329
PC H FHI CID WL N CP CR S+ P LDL A
Sbjct: 117 PCGHTFHINCIDHWLSTNTTCPLCRVSLLPAPKATSTGLDLEA 159
>gi|195501805|ref|XP_002097951.1| GE10089 [Drosophila yakuba]
gi|194184052|gb|EDW97663.1| GE10089 [Drosophila yakuba]
Length = 1259
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
+LF +VR LPC H FH +C+D+WL N CP CR + ++ AL+
Sbjct: 1195 TLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPNDALA 1244
>gi|432105151|gb|ELK31520.1| RING finger protein 215 [Myotis davidii]
Length = 202
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 248 WQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQ--------------VRGL 293
WQ V KPL +L +A++ + + T L L+ + +R L
Sbjct: 107 WQDLVCLGGSRAQEQKPLQQLWNAILLVAMLLCTGLVLQAQRQASRHSQQEPGGQWLRVL 166
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
PC H FH +C+D WL L CP C+ +V N
Sbjct: 167 PCKHEFHRDCVDPWLMLQQTCPLCKFNVLGN 197
>gi|429962515|gb|ELA42059.1| hypothetical protein VICG_00908 [Vittaforma corneae ATCC 50505]
Length = 345
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%)
Query: 264 PLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
PL K L F + + +F +VR L C H FH CID WLR +KCP CR SV
Sbjct: 269 PLQKYSEDLEFTECSICLDIFQVNEEVRVLSCKHCFHRNCIDSWLRSMLKCPICRNSV 326
>gi|38344371|emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group]
Length = 324
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 21/121 (17%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYG---- 258
LY + Q A E I+++P+++ + TD E Q + P+G
Sbjct: 205 LYAVSDQEGASEDDIRQIPRYKFRR--TD-------------EPEKQTADETGPFGGIMT 249
Query: 259 -FTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRC 317
+++P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP C
Sbjct: 250 ECGTNQPIEKVL-APEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLC 308
Query: 318 R 318
+
Sbjct: 309 K 309
>gi|357157250|ref|XP_003577735.1| PREDICTED: RING-H2 finger protein ATL65-like [Brachypodium
distachyon]
Length = 435
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F + ++R LP CAH FH +CID WLR + CP CR +V
Sbjct: 191 FADGDELRALPLCAHAFHADCIDVWLRAHATCPLCRAAV 229
>gi|195054421|ref|XP_001994123.1| GH17353 [Drosophila grimshawi]
gi|193895993|gb|EDV94859.1| GH17353 [Drosophila grimshawi]
Length = 1665
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
SLF VR LPC H FH +C+D+WL N CP CR + ++ AL
Sbjct: 1601 SLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMAKDAL 1649
>gi|357128092|ref|XP_003565710.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Brachypodium
distachyon]
Length = 246
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F + + R LP C H FH+ECID W R N CP CR V
Sbjct: 154 FEQGEEARALPRCGHRFHVECIDAWFRGNSTCPLCRADV 192
>gi|356502008|ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
Length = 380
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
FLE ++R LP C H FHIECID WL N CP CR +++
Sbjct: 158 FLEQDKLRLLPMCNHAFHIECIDTWLLSNSTCPLCRGTLY 197
>gi|356577483|ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
Length = 211
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 286 EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN---LDLSALSNLRTADSERSS 342
EVLQ+ C H FH ECI WL+ N CP CRCS+ P L+ + N+ ++D +
Sbjct: 120 EVLQIPY--CKHVFHFECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPINIISSDPPQHG 177
Query: 343 ASSVVTTTRYVRTQPSSQSYLVRMQG 368
A + + ++ P Q + + G
Sbjct: 178 A---IISDSPLQLPPQPQDHQEEVVG 200
>gi|410988439|ref|XP_004000492.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like [Felis catus]
Length = 631
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ E ++R LPC H FH+ CID WL N CP CR V
Sbjct: 584 YTEGNKLRILPCTHEFHVHCIDRWLSENSTCPICRREV 621
>gi|348677475|gb|EGZ17292.1| hypothetical protein PHYSODRAFT_360474 [Phytophthora sojae]
Length = 870
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 223 FRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTS 282
FR ++ T+ +E P + H + + + P + P A KEH +
Sbjct: 761 FREVSIETEVNEPPSPARDQHGRRPYTSKSRGAPASLINQLPTYTFTAA----KEHADQA 816
Query: 283 L---------FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
F +++ LPC H++H +CID WL LN CP C+ SV
Sbjct: 817 TPDCLICRCSFEVGEEIKSLPCFHSYHSDCIDSWLSLNKVCPVCQFSV 864
>gi|297834804|ref|XP_002885284.1| hypothetical protein ARALYDRAFT_479408 [Arabidopsis lyrata subsp.
lyrata]
gi|297331124|gb|EFH61543.1| hypothetical protein ARALYDRAFT_479408 [Arabidopsis lyrata subsp.
lyrata]
Length = 414
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E VR LP C H FH+ECIDEWLR + CP CR ++
Sbjct: 163 FEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>gi|4938496|emb|CAB43854.1| putative protein [Arabidopsis thaliana]
gi|7269510|emb|CAB79513.1| putative protein [Arabidopsis thaliana]
Length = 464
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 425 YKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCK 459
>gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S + + ++R LPC H+FH CID+WL +N CP C+ +V N
Sbjct: 348 SAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKFNVRKN 390
>gi|410918361|ref|XP_003972654.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 467
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WL+ N CP CR V
Sbjct: 433 LRVLPCSHEFHAKCVDKWLKANRTCPICRAEV 464
>gi|397621009|gb|EJK66053.1| hypothetical protein THAOC_13039, partial [Thalassiosira oceanica]
Length = 922
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSA 343
F ++R LPC H H C+D WL N CP+CR S+ +D S ++ LR+ RS +
Sbjct: 751 FSNGDELRVLPCGHEMHKTCLDAWLITNPTCPKCRYSMADLVDDSPMTQLRSMRFSRSRS 810
Query: 344 SSVVTTTRYV--RTQPSSQSYLVRMQGLLSPVHMGNT 378
+++ +V ++P G + PV +GN+
Sbjct: 811 AALSRFLGHVDLDSEPGDLELAETSTGTILPVDVGNS 847
>gi|326513864|dbj|BAJ87950.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F + ++R LP CAH FH +CID WLR + CP CR +V L S LR+A R S
Sbjct: 185 FGDGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAV--ALPPPVSSPLRSARRVRPS 242
>gi|115449125|ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial [Oryza sativa Japonica Group]
Length = 342
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSV 346
++R LPC H FH EC+D+WL++N CP C+ + S+ T+D+ RS + +
Sbjct: 285 ELRELPCTHCFHKECVDKWLKINALCPLCKSEI--------ASSSGTSDTRRSDHTDI 334
>gi|432930094|ref|XP_004081317.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oryzias latipes]
Length = 724
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ + ++R LPC+H FHI CID WL N CP CR +
Sbjct: 681 YAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPIL 719
>gi|242062944|ref|XP_002452761.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
gi|241932592|gb|EES05737.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
Length = 89
Score = 48.9 bits (115), Expect = 0.005, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 293 LPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
LPC H+FH CI++WLR+NV CP C+ +V N S
Sbjct: 49 LPCGHHFHCICINKWLRINVMCPLCQYNVPKNTSSSG 85
>gi|222623429|gb|EEE57561.1| hypothetical protein OsJ_07906 [Oryza sativa Japonica Group]
Length = 231
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY + Q A E I+++P+++ + + E+ V + G ++
Sbjct: 112 LYAVSDQEGASEDDIRQIPRYKFRRMDEP--------EKQSVNMTGSSGGIMIECG--TN 161
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+P+ K++ A + + S + + ++R LPC H+FH CID+WL +N CP C+ +V
Sbjct: 162 QPIEKVL-AAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKFNVR 220
Query: 323 PN 324
N
Sbjct: 221 KN 222
>gi|358253774|dbj|GAA53766.1| RING finger protein 11 [Clonorchis sinensis]
Length = 191
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVT 348
VR LPC H +H CID+WL + CP C + LD+ SN RTA E S S
Sbjct: 98 DVRYLPCLHTYHRACIDDWLMRSFVCPSCLRPI--ELDMILESN-RTAPKETCSES---- 150
Query: 349 TTRYVRTQPSSQSYLVRMQGLLSPVHMGN 377
TT R PS QS G VH +
Sbjct: 151 TTEGNRCSPSRQSSEPDENGTHEAVHTAS 179
>gi|224098397|ref|XP_002311162.1| predicted protein [Populus trichocarpa]
gi|222850982|gb|EEE88529.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F E Q+R LP C H++H+ CID WL + CP CR + + SN R DSERSS
Sbjct: 92 FEEGEQLRELPECLHSYHVACIDMWLYSHSSCPMCRTDAKHSQQV--FSNARDLDSERSS 149
>gi|195329748|ref|XP_002031572.1| GM26076 [Drosophila sechellia]
gi|194120515|gb|EDW42558.1| GM26076 [Drosophila sechellia]
Length = 1257
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
+LF +VR LPC H FH +C+D+WL N CP CR + ++ AL
Sbjct: 1190 NLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPNDAL 1238
>gi|47497169|dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 199
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSV 346
++R LPC H FH EC+D+WL++N CP C+ + S+ T+D+ RS + +
Sbjct: 142 ELRELPCTHCFHKECVDKWLKINALCPLCKSEI--------ASSSGTSDTRRSDHTDI 191
>gi|297599741|ref|NP_001047717.2| Os02g0674700 [Oryza sativa Japonica Group]
gi|255671161|dbj|BAF09631.2| Os02g0674700 [Oryza sativa Japonica Group]
Length = 379
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S + + ++R LPC H+FH CID+WL +N CP C+ +V N
Sbjct: 328 SAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKFNVRKN 370
>gi|51092240|gb|AAT94533.1| AT15166p [Drosophila melanogaster]
Length = 1256
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
+LF +VR LPC H FH +C+D+WL N CP CR + ++ AL
Sbjct: 1192 NLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPNDAL 1240
>gi|442618623|ref|NP_001262484.1| CG6923, isoform D [Drosophila melanogaster]
gi|440217328|gb|AGB95866.1| CG6923, isoform D [Drosophila melanogaster]
Length = 1265
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
+LF +VR LPC H FH +C+D+WL N CP CR + ++ AL
Sbjct: 1192 NLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPNDAL 1240
>gi|21356709|ref|NP_650112.1| CG6923, isoform A [Drosophila melanogaster]
gi|24646071|ref|NP_731623.1| CG6923, isoform B [Drosophila melanogaster]
gi|386765608|ref|NP_001247056.1| CG6923, isoform C [Drosophila melanogaster]
gi|7299505|gb|AAF54693.1| CG6923, isoform A [Drosophila melanogaster]
gi|16197957|gb|AAL13749.1| LD22771p [Drosophila melanogaster]
gi|23171037|gb|AAN13524.1| CG6923, isoform B [Drosophila melanogaster]
gi|211938579|gb|ACJ13186.1| FI06048p [Drosophila melanogaster]
gi|220947268|gb|ACL86177.1| CG6923-PA [synthetic construct]
gi|220956714|gb|ACL90900.1| CG6923-PA [synthetic construct]
gi|383292652|gb|AFH06374.1| CG6923, isoform C [Drosophila melanogaster]
Length = 1256
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
+LF +VR LPC H FH +C+D+WL N CP CR + ++ AL
Sbjct: 1192 NLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPNDAL 1240
>gi|348530058|ref|XP_003452528.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Oreochromis
niloticus]
Length = 297
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 50/137 (36%), Gaps = 50/137 (36%)
Query: 212 AVEALIQELPKFRLKAVPTDCS-ECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVH 270
A + +I LP + TDC ECP+C EE+ +G
Sbjct: 200 AEKEMISSLPTVCISQEQTDCRLECPVCREEYSLGE------------------------ 235
Query: 271 ALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR-------CSVFP 323
VR LPC H FH ECI WL L+ CP CR S+ P
Sbjct: 236 ------------------TVRKLPCLHYFHSECIVPWLELHDTCPVCRKSLDGVDNSLPP 277
Query: 324 NLDLSALSNLRTADSER 340
+ + +LRT ER
Sbjct: 278 TSEPAESRSLRTEQQER 294
>gi|413947959|gb|AFW80608.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 251
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ R LP C H FH+ECID W R N CP CR V
Sbjct: 154 KARALPRCGHRFHVECIDAWFRGNATCPLCRADV 187
>gi|260818404|ref|XP_002604373.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
gi|229289699|gb|EEN60384.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
Length = 446
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R +PCAH FH +C+D WL+ N CP CR V
Sbjct: 399 KLRRMPCAHEFHSKCVDRWLKQNGSCPVCRQQV 431
>gi|30686604|ref|NP_850254.1| RING-H2 finger protein ATL70 [Arabidopsis thaliana]
gi|68565230|sp|Q8RX29.1|ATL70_ARATH RecName: Full=RING-H2 finger protein ATL70
gi|20258808|gb|AAM13985.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|21689891|gb|AAM67506.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330254082|gb|AEC09176.1| RING-H2 finger protein ATL70 [Arabidopsis thaliana]
Length = 217
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVT 348
+R LP C H FH++CID WLRLN CP CR S P + L T +E +S V
Sbjct: 160 LRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLP-------TPLSTPLAEVVPLASSVA 212
Query: 349 TTR 351
TR
Sbjct: 213 ATR 215
>gi|255552646|ref|XP_002517366.1| ring finger protein, putative [Ricinus communis]
gi|223543377|gb|EEF44908.1| ring finger protein, putative [Ricinus communis]
Length = 376
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF-PNLDLS----ALSNLRTAD 337
F E ++R LP C+H FHI CID WL N CP CR ++F P + +LR D
Sbjct: 155 FTEKDKLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLFTPGFSIENPMFDFDDLREND 214
Query: 338 SERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVL 397
S + ++ + + V +G+L PV +G R D T E GG
Sbjct: 215 GYPGSGENGFPASQKIM---EIEEPAVIEKGVL-PVRLGKFRRLTDG-----TGEAGGET 265
Query: 398 SATQ 401
S++
Sbjct: 266 SSSN 269
>gi|444436429|gb|AGE09582.1| C3HC4Z1-like protein, partial [Eucalyptus cladocalyx]
Length = 137
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
S + E +VR LPC+H FH +C+D+WLR+ CP C+
Sbjct: 96 SKYKEREEVRQLPCSHMFHQKCVDQWLRITSCCPLCK 132
>gi|115434872|ref|NP_001042194.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|55296113|dbj|BAD67832.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|55296253|dbj|BAD67994.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|113531725|dbj|BAF04108.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|215736990|dbj|BAG95919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187619|gb|EEC70046.1| hypothetical protein OsI_00636 [Oryza sativa Indica Group]
gi|222617849|gb|EEE53981.1| hypothetical protein OsJ_00605 [Oryza sativa Japonica Group]
Length = 405
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
S F +R LPC H FH+EC+D+WL++N CP C+
Sbjct: 336 SKFSNNEDLRELPCNHVFHLECVDKWLKINALCPLCK 372
>gi|218185228|gb|EEC67655.1| hypothetical protein OsI_35068 [Oryza sativa Indica Group]
Length = 269
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
F E +V+ +PC+H+FH CI EWLR++ CP CR
Sbjct: 218 FKEGDRVKKMPCSHDFHANCISEWLRVSRLCPHCR 252
>gi|224087937|ref|XP_002308266.1| predicted protein [Populus trichocarpa]
gi|222854242|gb|EEE91789.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRT 335
S F E +VR LP C H+FH CID WL + CP CR SV P L A+ N RT
Sbjct: 113 SAFEEGEEVRQLPRCKHSFHAPCIDMWLYSHSDCPLCRSSVDPPL---AVCNRRT 164
>gi|15233745|ref|NP_192652.1| putative RING-H2 finger protein ATL37 [Arabidopsis thaliana]
gi|68565317|sp|Q9M0R4.1|ATL37_ARATH RecName: Full=Putative RING-H2 finger protein ATL37; Flags:
Precursor
gi|7267556|emb|CAB78037.1| putative protein [Arabidopsis thaliana]
gi|332657325|gb|AEE82725.1| putative RING-H2 finger protein ATL37 [Arabidopsis thaliana]
Length = 357
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSV---------FPNLDL---SALSNLRTADSERS 341
PC+H FH CIDEWL CP CR ++ P++D+ +A ++ + ERS
Sbjct: 138 PCSHTFHANCIDEWLSSRSTCPVCRANLSLKSGDSFPHPSMDVETGNAQRGVQESPDERS 197
Query: 342 -SASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLP 381
+ SSV T P S+S GLLS H+ LP
Sbjct: 198 LTGSSVTCNNNANYTTPRSRST-----GLLSSWHVPELFLP 233
>gi|242086104|ref|XP_002443477.1| hypothetical protein SORBIDRAFT_08g020130 [Sorghum bicolor]
gi|241944170|gb|EES17315.1| hypothetical protein SORBIDRAFT_08g020130 [Sorghum bicolor]
Length = 458
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F + ++R LP CAH FH +CID WLR + CP CR +V
Sbjct: 198 FADGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAV 236
>gi|297799346|ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 296 YKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCK 330
>gi|226507048|ref|NP_001141166.1| uncharacterized LOC100273252 [Zea mays]
gi|194703040|gb|ACF85604.1| unknown [Zea mays]
gi|414864834|tpg|DAA43391.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 313
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
S F+E +VR LP C+H FHI+CID WL+ + +CP CR V L + +A
Sbjct: 143 SEFVERERVRLLPNCSHAFHIDCIDTWLQGSARCPFCRSDV-------TLPAIPSARRAP 195
Query: 341 SSASSVVTTTRYVRTQPSSQSYLVRMQG 368
++A++V+ T+R +S+S ++ ++G
Sbjct: 196 AAAAAVLPTSRRRDDALASESIVIEVRG 223
>gi|168025500|ref|XP_001765272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683591|gb|EDQ70000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 27/35 (77%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + +++R L C H+FH+EC+D+WL++N CP C+
Sbjct: 265 YKDGVELRELVCTHHFHVECVDKWLKINASCPLCK 299
>gi|413936505|gb|AFW71056.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 210
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 282 SLFLEVLQ----VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
S+ LE +Q VR LP C H FH+ECID WL + CP CRCS+ P
Sbjct: 135 SVCLEDVQAGEMVRQLPPCKHLFHVECIDMWLHSHPTCPVCRCSLLP 181
>gi|145345425|ref|NP_194388.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186942|ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|110743905|dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana]
gi|332659822|gb|AEE85222.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659823|gb|AEE85223.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 335
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 296 YKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCK 330
>gi|301792106|ref|XP_002931020.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
Length = 614
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E ++R LPC+H FH+ CID WL N CP CR
Sbjct: 567 YTEGNRLRILPCSHEFHVHCIDRWLSENSTCPLCR 601
>gi|357436799|ref|XP_003588675.1| RING finger protein [Medicago truncatula]
gi|355477723|gb|AES58926.1| RING finger protein [Medicago truncatula]
Length = 403
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNL 325
++R LPC+H FH +C+D+WL++N CP C+ V +L
Sbjct: 353 ELRELPCSHLFHKDCVDKWLKINALCPLCKSEVGEDL 389
>gi|349603972|gb|AEP99650.1| E3 ubiquitin-protein ligase RLIM-like protein, partial [Equus
caballus]
Length = 225
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CID WL N CP CR +V
Sbjct: 178 YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 216
>gi|358375801|dbj|GAA92377.1| RING finger ubiquitin ligase [Aspergillus kawachii IFO 4308]
Length = 801
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 24/149 (16%)
Query: 178 PEWAFEAAGQEMRGIGQD--TAAYHPGLYLTAAQRE-AVEALIQELPKFRLKAVPTDCSE 234
P + + ++ G G D + P L A +RE ++EA ++ K R K +
Sbjct: 673 PAYDYHPVLRDSSGSGDDLESGGVLPIGALRADEREYSMEAKDED--KQRAKDKKKAVFD 730
Query: 235 CPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP 294
C IC++E V V P G S + +L+ + +M T P
Sbjct: 731 CAICMQEIEV------PVLAAPGGAGSSS-MTDGATSLLSRRTYMVT------------P 771
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
C H FH C++ W+RL ++CP CR S+ P
Sbjct: 772 CRHIFHSTCLESWMRLRLQCPICRESIPP 800
>gi|242043882|ref|XP_002459812.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
gi|241923189|gb|EER96333.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
Length = 357
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFP-NLD 326
+ + +++R LPC H+FH CID+WL +N CP C+ ++ NLD
Sbjct: 310 YEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFNIVKSNLD 353
>gi|15230241|ref|NP_188523.1| RING-H2 finger protein ATL65 [Arabidopsis thaliana]
gi|42572481|ref|NP_974336.1| RING-H2 finger protein ATL65 [Arabidopsis thaliana]
gi|68565164|sp|Q67YI6.2|ATL65_ARATH RecName: Full=RING-H2 finger protein ATL65
gi|9280310|dbj|BAB01689.1| unnamed protein product [Arabidopsis thaliana]
gi|20258806|gb|AAM13984.1| unknown protein [Arabidopsis thaliana]
gi|21689663|gb|AAM67453.1| unknown protein [Arabidopsis thaliana]
gi|22531227|gb|AAM97117.1| unknown protein [Arabidopsis thaliana]
gi|30725686|gb|AAP37865.1| At3g18930 [Arabidopsis thaliana]
gi|51969336|dbj|BAD43360.1| unknown protein [Arabidopsis thaliana]
gi|332642648|gb|AEE76169.1| RING-H2 finger protein ATL65 [Arabidopsis thaliana]
gi|332642649|gb|AEE76170.1| RING-H2 finger protein ATL65 [Arabidopsis thaliana]
Length = 411
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E VR LP C H FH+ECIDEWLR + CP CR ++
Sbjct: 163 FEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>gi|77548612|gb|ABA91409.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|125576181|gb|EAZ17403.1| hypothetical protein OsJ_32926 [Oryza sativa Japonica Group]
Length = 269
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
F E +V+ +PC+H+FH CI EWLR++ CP CR
Sbjct: 218 FKEGDRVKKMPCSHDFHANCISEWLRVSRLCPHCR 252
>gi|388580935|gb|EIM21246.1| hypothetical protein WALSEDRAFT_32711 [Wallemia sebi CBS 633.66]
Length = 574
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 18/111 (16%)
Query: 291 RGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTT 350
+ LPC+H FH C+ WL CP CR SV PN A +ERS +
Sbjct: 318 KKLPCSHIFHRHCLKSWLERQQTCPTCRTSVVPN-----------AQNERSDRPNNGNEN 366
Query: 351 RYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQ 401
RT+P R + P + N + A Q+ N S+T
Sbjct: 367 ERPRTEP-------RREVQPEPATRTQPQPANTNENAQQSNANNSEQSSTN 410
>gi|51971106|dbj|BAD44245.1| unknown protein [Arabidopsis thaliana]
Length = 411
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E VR LP C H FH+ECIDEWLR + CP CR ++
Sbjct: 163 FEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>gi|299473025|emb|CBN77418.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 458
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 286 EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
EV++V LPC H+FH +C+D WL + +CP C+ F
Sbjct: 152 EVIKV--LPCGHDFHSDCLDPWLEVKAECPLCKAPAF 186
>gi|359476391|ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL 333
++R LPC+H FH EC+D+WL++N CP C+ V + L +LS L
Sbjct: 375 ELRELPCSHFFHKECVDKWLKINALCPLCKREVGESF-LGSLSGL 418
>gi|410909057|ref|XP_003968007.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Takifugu
rubripes]
Length = 519
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC+H FHI CID WL N CP CR +
Sbjct: 481 KLRRLPCSHEFHIHCIDRWLSENNTCPICRQPIL 514
>gi|222618292|gb|EEE54424.1| hypothetical protein OsJ_01479 [Oryza sativa Japonica Group]
Length = 1082
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ R LP C H FH+ECID W R N CP CR V
Sbjct: 992 KARALPRCGHRFHVECIDAWFRENSTCPLCRADV 1025
>gi|168025496|ref|XP_001765270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683589|gb|EDQ69998.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 27/35 (77%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + +++R L C H+FH+EC+D+WL++N CP C+
Sbjct: 261 YKDGVELRELVCTHHFHVECVDKWLKINASCPLCK 295
>gi|302756339|ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 207 AAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLC 266
A R A +I LP ++ K+ P+ S+ + +E + F G + +
Sbjct: 278 AQNRGASAEVIAALPTYKFKSRPSSESK-----DGSESDSEGSNEGGFVAAGTDKERAVS 332
Query: 267 --KLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
V + + + + +R L C H+FH++C+D+WL++N CP C+ V
Sbjct: 333 ADDAVCCICLAR-------YRDGEPLRELSCTHHFHVDCVDKWLKINASCPLCKLDVGGA 385
Query: 325 LDLSALSNLRTADSERSS 342
D S + A R++
Sbjct: 386 NDQSGNAAGNEASEARAA 403
>gi|242036907|ref|XP_002465848.1| hypothetical protein SORBIDRAFT_01g046940 [Sorghum bicolor]
gi|241919702|gb|EER92846.1| hypothetical protein SORBIDRAFT_01g046940 [Sorghum bicolor]
Length = 317
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F+E +VR LP C+H FHI+CID WL+ + +CP CR V
Sbjct: 139 SEFVERERVRLLPNCSHAFHIDCIDTWLQGSARCPFCRSDV 179
>gi|313241750|emb|CBY33968.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR---CSVFPNLD 326
QVR LPC H H +CID WL+ N +CP C+ S+F N D
Sbjct: 165 QVRRLPCLHILHSDCIDPWLKDNTECPTCKFDISSIFENND 205
>gi|281344904|gb|EFB20488.1| hypothetical protein PANDA_021707 [Ailuropoda melanoleuca]
Length = 612
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E ++R LPC+H FH+ CID WL N CP CR
Sbjct: 567 YTEGNRLRILPCSHEFHVHCIDRWLSENSTCPLCR 601
>gi|449019331|dbj|BAM82733.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 187
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
FL ++R LPC H +H +CID WLR +CP C+ ++
Sbjct: 147 DFFLPEERIRVLPCLHQYHQQCIDPWLRQKARCPVCKSAIL 187
>gi|350397367|ref|XP_003484858.1| PREDICTED: hypothetical protein LOC100746954 [Bombus impatiens]
Length = 690
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 285 LEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E LQ +R LPC+H FH +CID+WL+ N CP CR
Sbjct: 641 FEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICR 675
>gi|297742376|emb|CBI34525.3| unnamed protein product [Vitis vinifera]
Length = 177
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 20/30 (66%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
C H F +CI WLR N CP CRCSVFPN
Sbjct: 105 CKHEFPADCIYHWLRTNSTCPICRCSVFPN 134
>gi|261192082|ref|XP_002622448.1| RING finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239589323|gb|EEQ71966.1| RING finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 563
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F++ VR LPC H FH EC+D WL +NV CP CR ++ P A+
Sbjct: 363 TDDFVKGQDVRLLPCQHKFHPECVDPWL-INVSGTCPLCRINLNP----------EEAEP 411
Query: 339 ERSSASSVVTTTRYVRTQPSSQSYLVRMQG 368
E A++ +T T P+ S L R G
Sbjct: 412 EPDVAATPTSTPSRA-TTPTPPSTLARHSG 440
>gi|328779969|ref|XP_392089.3| PREDICTED: hypothetical protein LOC408543 isoform 1 [Apis
mellifera]
Length = 692
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 285 LEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E LQ +R LPC+H FH +CID+WL+ N CP CR
Sbjct: 643 FEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICR 677
>gi|224107873|ref|XP_002314635.1| predicted protein [Populus trichocarpa]
gi|222863675|gb|EEF00806.1| predicted protein [Populus trichocarpa]
Length = 340
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E ++R +P C+H FHI+CID WL+ N CP CR S+
Sbjct: 125 FQEAEKLRRIPNCSHVFHIDCIDVWLQSNANCPLCRTSI 163
>gi|380024410|ref|XP_003695990.1| PREDICTED: uncharacterized protein LOC100863582 [Apis florea]
Length = 692
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 285 LEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E LQ +R LPC+H FH +CID+WL+ N CP CR
Sbjct: 643 FEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICR 677
>gi|296081927|emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL 333
++R LPC+H FH EC+D+WL++N CP C+ V + L +LS L
Sbjct: 355 ELRELPCSHFFHKECVDKWLKINALCPLCKREVGESF-LGSLSGL 398
>gi|307210670|gb|EFN87093.1| RING finger protein 44 [Harpegnathos saltator]
Length = 641
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 285 LEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E LQ +R LPC+H FH +CID+WL+ N CP CR
Sbjct: 592 FEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICR 626
>gi|218187179|gb|EEC69606.1| hypothetical protein OsI_38975 [Oryza sativa Indica Group]
Length = 440
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F + ++R LP CAH FH +CID WLR + CP CR +V
Sbjct: 191 FADGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAV 229
>gi|395850185|ref|XP_003797677.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Otolemur
garnettii]
gi|395850187|ref|XP_003797678.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Otolemur
garnettii]
Length = 681
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 640 KLRQLPCTHEFHIHCIDRWLSENCTCPVCRQPVL 673
>gi|297613471|ref|NP_001067185.2| Os12g0596200 [Oryza sativa Japonica Group]
gi|77556398|gb|ABA99194.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|255670453|dbj|BAF30204.2| Os12g0596200 [Oryza sativa Japonica Group]
Length = 310
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F + ++R LP CAH FH +CID WLR + CP CR +V
Sbjct: 111 FADGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAV 149
>gi|47223363|emb|CAG04224.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC+H FHI CID WL N CP CR +
Sbjct: 310 KLRRLPCSHEFHIHCIDRWLSENNTCPICRQPIL 343
>gi|395841991|ref|XP_003793805.1| PREDICTED: uncharacterized protein LOC100942711 [Otolemur
garnettii]
Length = 620
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 237 ICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSL-------FLEVLQ 289
+ L +F V N+ D + P G T + + L A+ E+ ++ + + E +
Sbjct: 526 LNLAQFFVLND--DDDGYEPTGLTKQQ-IDNL--AVRNFDENDTSKICSVCITEYTEGNK 580
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+R LPC+H +H+ CID WL N CP CR V
Sbjct: 581 LRVLPCSHEYHVHCIDRWLSDNSTCPICRNDVL 613
>gi|359474241|ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S + + +++R LPC H+FH C+D+WL +N CP C+ ++ +
Sbjct: 333 SAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKS 375
>gi|226497324|ref|NP_001144642.1| uncharacterized protein LOC100277663 [Zea mays]
gi|195645012|gb|ACG41974.1| hypothetical protein [Zea mays]
Length = 214
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLS 328
VR LP C H FH++C+D WLR + CP CRC + P D+S
Sbjct: 156 VRQLPACRHLFHVDCVDAWLRAHRTCPLCRCQLSPRNDVS 195
>gi|340725904|ref|XP_003401304.1| PREDICTED: hypothetical protein LOC100651818 [Bombus terrestris]
Length = 691
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 285 LEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E LQ +R LPC+H FH +CID+WL+ N CP CR
Sbjct: 642 FEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICR 676
>gi|317419922|emb|CBN81958.1| RING finger protein 6, partial [Dicentrarchus labrax]
Length = 283
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++R LPC+H FHI CID WL N CP CR
Sbjct: 245 KLRRLPCSHEFHIHCIDRWLSENNTCPICR 274
>gi|302765873|ref|XP_002966357.1| hypothetical protein SELMODRAFT_8824 [Selaginella moellendorffii]
gi|302792875|ref|XP_002978203.1| hypothetical protein SELMODRAFT_8819 [Selaginella moellendorffii]
gi|300154224|gb|EFJ20860.1| hypothetical protein SELMODRAFT_8819 [Selaginella moellendorffii]
gi|300165777|gb|EFJ32384.1| hypothetical protein SELMODRAFT_8824 [Selaginella moellendorffii]
Length = 50
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 35/88 (39%), Gaps = 43/88 (48%)
Query: 235 CPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP 294
CPICLEEFH GN +R LP
Sbjct: 1 CPICLEEFHTGN------------------------------------------ALRVLP 18
Query: 295 -CAHNFHIECIDEWLRLNVKCPRCRCSV 321
C H+FH+ECID WLR N CP CR S+
Sbjct: 19 WCTHSFHVECIDHWLRQNATCPVCRMSL 46
>gi|413954129|gb|AFW86778.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 216
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLS 328
VR LP C H FH++C+D WLR + CP CRC + P D+S
Sbjct: 158 VRQLPACRHLFHVDCVDAWLRAHRTCPLCRCQLSPRNDVS 197
>gi|325091954|gb|EGC45264.1| RING-7 protein [Ajellomyces capsulatus H88]
Length = 633
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F++ VR LPC H FH EC+D WL +NV CP CR ++ N + D+
Sbjct: 389 TDDFVKGQDVRLLPCKHKFHPECVDPWL-INVSGTCPLCRVNL----------NTQEPDT 437
Query: 339 ERSSASSVVTTTRYV--RTQPSSQ 360
+ ++ +T+R +QP++Q
Sbjct: 438 DSDDTATPASTSRASTPTSQPAAQ 461
>gi|432862383|ref|XP_004069828.1| PREDICTED: uncharacterized protein LOC101160975 [Oryzias latipes]
Length = 445
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H++H++CID WL+ N CP CR ++
Sbjct: 399 KLRMLPCFHDYHVQCIDRWLKDNTTCPICRANL 431
>gi|224141289|ref|XP_002324007.1| predicted protein [Populus trichocarpa]
gi|222867009|gb|EEF04140.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F E ++R LP C+H FHI CID WL N CP CR ++F S + + D R
Sbjct: 80 FSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRGTLFSPAGFSMENPMFDFDDLRED 139
Query: 343 ASSVVTTTR-YVRTQPSSQ-SYLVRMQGLLSPVHMGNTRLPN 382
+V TQ + Q +V +G+L PV +G R N
Sbjct: 140 DGCPGNRDNGFVPTQKTLQIDEIVVEKGVL-PVRLGKFRKLN 180
>gi|357112906|ref|XP_003558246.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Brachypodium
distachyon]
Length = 284
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 276 KEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ ++ S+ LE + V R LPC H FH+ECID WLR CP C+ V
Sbjct: 216 EDELTCSVCLEQVVVGDLLRSLPCLHQFHVECIDPWLRQQGTCPVCKHQV 265
>gi|449432181|ref|XP_004133878.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449480146|ref|XP_004155812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 385
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF-PN 324
++R LPC H+FH CID+WL +N CP C+ ++ PN
Sbjct: 342 ELRELPCNHHFHCNCIDKWLHMNATCPLCKFNILKPN 378
>gi|383851749|ref|XP_003701394.1| PREDICTED: uncharacterized protein LOC100882833 [Megachile
rotundata]
Length = 693
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 285 LEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E LQ +R LPC+H FH +CID+WL+ N CP CR
Sbjct: 644 FEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICR 678
>gi|356554742|ref|XP_003545702.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
max]
Length = 385
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 23/155 (14%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNL----------DLSAL 330
S F E +R LP C H FH+ CID WLR + CP CR + +L D S+L
Sbjct: 172 SEFQEDENLRLLPKCHHAFHLPCIDTWLRSHTNCPMCRAPIVADLATARMESSFVDSSSL 231
Query: 331 SNLRTADSERSSASSVVTTTRYVRTQPSSQSYL-VRMQGLLSPVHMGNTRLPNDT----- 384
N E S+ S + R + + VR+ +PV + LP +
Sbjct: 232 ENSHMEVLENSAPDSELMNNRAEEEEGQLEVEDGVRVCETETPVEDVASTLPRSSVSLDS 291
Query: 385 ------DIALQTVENGGVLSATQNRIAMGPFSSTG 413
++AL TVE+ G + P +S G
Sbjct: 292 FSFANFNLALATVESNGNSKRVLGGVDDDPTASKG 326
>gi|326914309|ref|XP_003203468.1| PREDICTED: e3 ubiquitin-protein ligase RNF6-like [Meleagris
gallopavo]
Length = 744
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 703 KLRQLPCMHEFHIHCIDRWLSENSTCPICRQPVL 736
>gi|189234186|ref|XP_967614.2| PREDICTED: similar to ring finger protein [Tribolium castaneum]
gi|270002665|gb|EEZ99112.1| hypothetical protein TcasGA2_TC005005 [Tribolium castaneum]
Length = 491
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E QV R LPC+H FH +CID+WLR N CP CR
Sbjct: 446 FEARQVLRVLPCSHEFHAKCIDKWLRSNRTCPICR 480
>gi|357163846|ref|XP_003579865.1| PREDICTED: RING-H2 finger protein ATL52-like [Brachypodium
distachyon]
Length = 396
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F + VR LP CAH FH+ CID WLR +V CP CR V +A ++S++S+
Sbjct: 199 FQDGELVRLLPKCAHAFHVPCIDTWLRAHVNCPLCRSDVLDPAAAAATGVAVQSNSDQST 258
Query: 343 ASSVVTTT 350
A V
Sbjct: 259 ADPDVNAN 266
>gi|115478553|ref|NP_001062870.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|48716984|dbj|BAD23676.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|113631103|dbj|BAF24784.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|215767689|dbj|BAG99917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201929|gb|EEC84356.1| hypothetical protein OsI_30879 [Oryza sativa Indica Group]
gi|347737076|gb|AEP20519.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 414
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH++C+D+WL++N CP C+ +
Sbjct: 350 ELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|359474239|ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S + + +++R LPC H+FH C+D+WL +N CP C+ ++ +
Sbjct: 322 SAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKS 364
>gi|222641326|gb|EEE69458.1| hypothetical protein OsJ_28860 [Oryza sativa Japonica Group]
Length = 616
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH++C+D+WL++N CP C+ +
Sbjct: 526 ELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 558
>gi|226500896|ref|NP_001146330.1| uncharacterized protein LOC100279906 [Zea mays]
gi|219886659|gb|ACL53704.1| unknown [Zea mays]
Length = 414
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH++C+D+WL++N CP C+ +
Sbjct: 350 ELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|147832281|emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
Length = 641
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL-----RTADSER--- 340
+R LP C H FH+ C+D WL+LN CP CR S P + LS L AD R
Sbjct: 140 LRMLPDCRHCFHLYCVDAWLKLNASCPVCRNSPLPTPLSTPLSELVPLSQYPADRRRRFY 199
Query: 341 SSASSVVTTTRYVRTQPSSQS 361
S S +VT T P SQ
Sbjct: 200 SVRSLMVTDTFSNSINPESQD 220
>gi|52076552|dbj|BAD45455.1| ring-H2 zinc finger protein-like [Oryza sativa Japonica Group]
gi|52077541|dbj|BAD45600.1| ring-H2 zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ R LP C H FH+ECID W R N CP CR V
Sbjct: 309 KARALPRCGHRFHVECIDAWFRENSTCPLCRADV 342
>gi|359474243|ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S + + +++R LPC H+FH C+D+WL +N CP C+ ++ +
Sbjct: 342 SAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKS 384
>gi|218192790|gb|EEC75217.1| hypothetical protein OsI_11484 [Oryza sativa Indica Group]
Length = 722
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL 333
S F + ++R LP C+H FH +CI EWL +V CP CRC++ P D +A +N+
Sbjct: 297 SEFDDDEELRLLPKCSHAFHPDCIGEWLAGHVTCPVCRCNLAP--DAAAEANV 347
>gi|170039241|ref|XP_001847450.1| ring finger protein [Culex quinquefasciatus]
gi|167862851|gb|EDS26234.1| ring finger protein [Culex quinquefasciatus]
Length = 539
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E QV R LPC+H FH +C+D+WLR N CP CR
Sbjct: 492 FEARQVLRVLPCSHEFHAKCVDKWLRSNRTCPICR 526
>gi|356555922|ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC+H FH+ C+D+WL++N CP C+ V
Sbjct: 377 ELRELPCSHFFHVMCVDKWLKINATCPLCKNEV 409
>gi|326505908|dbj|BAJ91193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC H FH++C+D WLR+ CP C+
Sbjct: 682 YREKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCK 716
>gi|242090025|ref|XP_002440845.1| hypothetical protein SORBIDRAFT_09g008150 [Sorghum bicolor]
gi|241946130|gb|EES19275.1| hypothetical protein SORBIDRAFT_09g008150 [Sorghum bicolor]
Length = 186
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
VR LP C H FH+ECID WLR + CP CR +V PN
Sbjct: 141 VRRLPVCNHLFHVECIDMWLRSHSTCPICRAAVEPN 176
>gi|242051603|ref|XP_002454947.1| hypothetical protein SORBIDRAFT_03g001960 [Sorghum bicolor]
gi|241926922|gb|EES00067.1| hypothetical protein SORBIDRAFT_03g001960 [Sorghum bicolor]
Length = 435
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+VR LP C H FH++C+D WLR CP CR V P
Sbjct: 140 KVRALPDCGHVFHVDCVDAWLRSRTTCPVCRAEVRPK 176
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 286 EVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
E VR LP C H FH ECID WL CP CR P
Sbjct: 341 EGQMVRQLPGCKHVFHQECIDVWLASRASCPVCRGKAEP 379
>gi|356502289|ref|XP_003519952.1| PREDICTED: RING finger protein 126-like [Glycine max]
Length = 319
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 73/197 (37%), Gaps = 77/197 (39%)
Query: 164 PVSEYGVLLDMIRVPEWAFEAAGQEMRGIG----------------QDTAAYHPGLYLTA 207
P SE G L+ +R P + + E +G Q A PG Y +
Sbjct: 149 PFSE-GALI--VRGPNLSHTTSSNENNAVGSSLNDLVVGSGFDLLLQHLAQIGPGGYSSV 205
Query: 208 ---AQREAVEAL--IQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
AQ+ A+EAL + KF +CP+CLE+ VG+E
Sbjct: 206 NPPAQKAAIEALPSVTSEEKF----------QCPVCLEDVEVGSE--------------- 240
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ +PC H FH +CI WL+L+ CP CR +
Sbjct: 241 ---------------------------AKEMPCMHKFHGDCIVSWLKLHGSCPVCRFQM- 272
Query: 323 PNLDLSALSNLRTADSE 339
P+ D + +N+ +SE
Sbjct: 273 PSEDSTLEANVDNRNSE 289
>gi|240276460|gb|EER39972.1| RING-7 protein [Ajellomyces capsulatus H143]
Length = 447
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F++ VR LPC H FH EC+D WL +NV CP CR ++ N + D+
Sbjct: 202 TDDFVKGQDVRLLPCKHKFHPECVDPWL-INVSGTCPLCRVNL----------NTQEPDT 250
Query: 339 ERSSASSVVTTTRYV--RTQPSSQ 360
+ ++ +T+R +QP++Q
Sbjct: 251 DSDDTATPASTSRASTPTSQPAAQ 274
>gi|226509876|ref|NP_001145693.1| uncharacterized protein LOC100279197 [Zea mays]
gi|219884039|gb|ACL52394.1| unknown [Zea mays]
Length = 487
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+R LPC H FH ECID WL + + CP C+ +VF
Sbjct: 453 LRRLPCMHKFHKECIDRWLGMKIWCPVCKSNVF 485
>gi|195037839|ref|XP_001990368.1| GH19305 [Drosophila grimshawi]
gi|193894564|gb|EDV93430.1| GH19305 [Drosophila grimshawi]
Length = 885
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 800 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 828
>gi|307179492|gb|EFN67806.1| RING finger protein 44 [Camponotus floridanus]
Length = 705
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 285 LEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E LQ +R LPC+H FH +CID+WL+ N CP CR
Sbjct: 656 FEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICR 690
>gi|359473945|ref|XP_003631379.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Vitis vinifera]
Length = 176
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 20/30 (66%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
C H F +CI WLR N CP CRCSVFPN
Sbjct: 104 CKHEFPADCIYHWLRTNSTCPICRCSVFPN 133
>gi|414885024|tpg|DAA61038.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 382
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH++C+D+WL++N CP C+ +
Sbjct: 318 ELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 350
>gi|308808592|ref|XP_003081606.1| putative zinc finger protein (ISS) [Ostreococcus tauri]
gi|116060071|emb|CAL56130.1| putative zinc finger protein (ISS) [Ostreococcus tauri]
Length = 663
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 291 RGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSE 339
+ LPC H+FH+ C+ WL CP CR SV P + A + +R A+ E
Sbjct: 308 KKLPCGHSFHLHCLRSWLERQQACPTCRHSVLPERERRA-NAVRQAEEE 355
>gi|354468545|ref|XP_003496713.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Cricetulus griseus]
gi|344237279|gb|EGV93382.1| RING finger protein 6 [Cricetulus griseus]
Length = 666
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSN 332
S ++ ++R LPC H FHI CID WL N CP CR P L+ A +N
Sbjct: 618 SDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRQ---PVLEFGAANN 665
>gi|148910158|gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
S + + +++ LPC H+FH CI +WLR+N CP C+ +V N D
Sbjct: 323 SAYEDGVELYELPCNHHFHCGCIAKWLRINATCPLCKYNVVKNDD 367
>gi|157137022|ref|XP_001656980.1| ring finger protein [Aedes aegypti]
gi|108884247|gb|EAT48472.1| AAEL000523-PA [Aedes aegypti]
Length = 559
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E Q+ R LPC+H FH +C+D+WLR N CP CR
Sbjct: 512 FEARQILRVLPCSHEFHAKCVDKWLRSNRTCPICR 546
>gi|449432054|ref|XP_004133815.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
Length = 382
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+L VR +P C H FH++CID+WLR+N CP CR S P+
Sbjct: 333 YLTKDTVRCIPECKHCFHVDCIDQWLRVNSSCPLCRNSPNPS 374
>gi|148232126|ref|NP_001091531.1| E3 ubiquitin-protein ligase RNF6 [Bos taurus]
gi|146186811|gb|AAI40556.1| RNF6 protein [Bos taurus]
gi|296481743|tpg|DAA23858.1| TPA: ring finger protein 6 [Bos taurus]
Length = 669
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 621 SDYVAGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQPVL 661
>gi|357153329|ref|XP_003576416.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 317
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH++C+D+WL++N CP C+ +
Sbjct: 253 ELRELPCTHLFHVQCVDKWLKINAVCPLCKTDI 285
>gi|347965741|ref|XP_321788.3| AGAP001358-PA [Anopheles gambiae str. PEST]
gi|333470373|gb|EAA43207.3| AGAP001358-PA [Anopheles gambiae str. PEST]
Length = 778
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
E Q+ R LPC+H FH +C+D+WLR N CP CR +
Sbjct: 731 FEARQILRVLPCSHEFHAKCVDKWLRSNRTCPICRGNA 768
>gi|259490751|ref|NP_001158971.1| uncharacterized protein LOC100303920 [Zea mays]
gi|195615946|gb|ACG29803.1| hypothetical protein [Zea mays]
Length = 489
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+R LPC H FH ECID WL + + CP C+ +VF
Sbjct: 455 LRRLPCMHKFHKECIDRWLGMKIWCPVCKSNVF 487
>gi|212536230|ref|XP_002148271.1| RING finger domain protein, putative [Talaromyces marneffei ATCC
18224]
gi|210070670|gb|EEA24760.1| RING finger domain protein, putative [Talaromyces marneffei ATCC
18224]
Length = 520
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F++ VR LPC H FH +CID WL +NV CP CR + P + A
Sbjct: 366 TDDFVKGQDVRLLPCNHQFHPDCIDPWL-INVSGTCPLCRIDLNPGGSTETAEDDEAAHE 424
Query: 339 ERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPV 373
E + +V ++T Q +S + + G LS +
Sbjct: 425 EGEAVDAVESST----NQTNSNRHSRGLAGYLSDI 455
>gi|147859662|emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
Length = 547
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++R LPC+H FH EC+D+WL++N CP C+
Sbjct: 490 ELRELPCSHFFHKECVDKWLKINALCPLCK 519
>gi|449269694|gb|EMC80445.1| RING finger protein 6 [Columba livia]
Length = 677
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 636 KLRQLPCMHEFHIHCIDRWLSENSTCPICRQPVL 669
>gi|440900640|gb|ELR51723.1| E3 ubiquitin-protein ligase RNF6 [Bos grunniens mutus]
Length = 667
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 619 SDYVAGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQPVL 659
>gi|414885026|tpg|DAA61040.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414885027|tpg|DAA61041.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 414
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH++C+D+WL++N CP C+ +
Sbjct: 350 ELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|308505926|ref|XP_003115146.1| CRE-TOE-4 protein [Caenorhabditis remanei]
gi|308259328|gb|EFP03281.1| CRE-TOE-4 protein [Caenorhabditis remanei]
Length = 503
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
S F + +R LPC H FH ECI +WL +N KCP CR
Sbjct: 455 SNFEDGESIRKLPCNHVFHPECIYKWLDINKKCPMCR 491
>gi|449477933|ref|XP_004155166.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
Length = 382
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+L VR +P C H FH++CID+WLR+N CP CR S P+
Sbjct: 333 YLTKDTVRCIPECKHCFHVDCIDQWLRVNSSCPLCRNSPNPS 374
>gi|449455322|ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
gi|449472703|ref|XP_004153673.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
gi|449532533|ref|XP_004173235.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
Length = 421
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
VR LP C+H FH++CID WLR + CP CR VF
Sbjct: 178 VRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVF 211
>gi|431916794|gb|ELK16555.1| E3 ubiquitin-protein ligase rnf12-A [Pteropus alecto]
Length = 608
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ E ++R LPC+H +H+ CID WL N CP CR V
Sbjct: 561 YSEGNRLRILPCSHEYHVHCIDRWLAENTTCPICRGKV 598
>gi|224066851|ref|XP_002302246.1| predicted protein [Populus trichocarpa]
gi|222843972|gb|EEE81519.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 43/127 (33%)
Query: 212 AVEALIQELPKFRLKAVP-TDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVH 270
A E I +P +++A + S CP+C+EEF VG E
Sbjct: 211 APEIAIDTIPTVKIEASHLVNDSHCPVCMEEFKVGGE----------------------- 247
Query: 271 ALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
R LPC H +H ECI WLRL+ CP CR + N + SA
Sbjct: 248 -------------------ARELPCKHIYHSECIVPWLRLHNSCPVCRKELPVNSESSAQ 288
Query: 331 SNLRTAD 337
D
Sbjct: 289 DEDECED 295
>gi|118084993|ref|XP_417129.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Gallus gallus]
Length = 672
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 631 KLRQLPCMHEFHIHCIDRWLSENSTCPICRQPVL 664
>gi|449463372|ref|XP_004149408.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 315
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Query: 207 AAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLC 266
+ ++ A + I +LP +R KAV E ++ Q D G P C
Sbjct: 224 STEKGASDDQISQLPCWRYKAV------------EANINPRSQLDNS--NTGLLKEDPEC 269
Query: 267 KLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ A KE +VR LPC+H FH+ C+D+WL + CP C+
Sbjct: 270 CICLAKYIDKE-----------EVRQLPCSHVFHLRCVDKWLAITSSCPLCK 310
>gi|414877903|tpg|DAA55034.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 414
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F + ++R LP CAH FH +CID WLR + CP CR +V
Sbjct: 186 FADGDELRTLPHCAHAFHADCIDVWLRAHASCPLCRAAV 224
>gi|390179083|ref|XP_003736797.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859705|gb|EIM52870.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1224
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 1142 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 1170
>gi|322780920|gb|EFZ10132.1| hypothetical protein SINV_09125 [Solenopsis invicta]
Length = 611
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 285 LEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E LQ +R LPC+H FH +CID+WL+ N CP CR
Sbjct: 562 FEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICR 596
>gi|148908123|gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
S + + +++ LPC H+FH CI +WLR+N CP C+ +V N D
Sbjct: 323 SAYEDGVELYELPCNHHFHCGCIAKWLRINATCPLCKYNVVKNDD 367
>gi|21554228|gb|AAM63303.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 12/124 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I +L KF+ + V H +E Q + T
Sbjct: 259 LYAVAEQEGASKEDIDQLTKFKFRKVGDTMK---------HTVDEEQGEGDSGGV-MTEC 308
Query: 263 KPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
+ HAL + S + + ++R LPC H+FH C+D+WL +N CP C+ +
Sbjct: 309 GTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYN 368
Query: 321 VFPN 324
+ +
Sbjct: 369 ILKS 372
>gi|242048934|ref|XP_002462211.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
gi|241925588|gb|EER98732.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
Length = 415
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH++C+D+WL++N CP C+ +
Sbjct: 351 ELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 383
>gi|402901611|ref|XP_003913739.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Papio
anubis]
Length = 755
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 707 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQPVL 747
>gi|297827071|ref|XP_002881418.1| hypothetical protein ARALYDRAFT_482561 [Arabidopsis lyrata subsp.
lyrata]
gi|297327257|gb|EFH57677.1| hypothetical protein ARALYDRAFT_482561 [Arabidopsis lyrata subsp.
lyrata]
Length = 180
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
+R LP C H FH++CID WLRLN CP CR S P
Sbjct: 123 LRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLP 157
>gi|18407748|ref|NP_564810.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|122064956|sp|Q8LDB8.2|RING2_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g63170; AltName:
Full=RING finger protein At1g63170
gi|12323245|gb|AAG51597.1|AC010795_1 hypothetical protein; 76801-78300 [Arabidopsis thaliana]
gi|332195943|gb|AEE34064.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 381
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I +L KF+ + V ++ + Q D +
Sbjct: 259 LYAVAEQEGASKEDIDQLTKFKFRKVGDT-------MKHTVDEEQGQGDSGGVMTECGTD 311
Query: 263 KPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
P+ HAL + S + + ++R LPC H+FH C+D+WL +N CP C+ +
Sbjct: 312 SPV---EHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYN 368
Query: 321 VFPN 324
+ +
Sbjct: 369 ILKS 372
>gi|242040667|ref|XP_002467728.1| hypothetical protein SORBIDRAFT_01g033150 [Sorghum bicolor]
gi|241921582|gb|EER94726.1| hypothetical protein SORBIDRAFT_01g033150 [Sorghum bicolor]
Length = 274
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSAS 344
C H FH+EC+D WLR + CP CRC+V D + +++ S +
Sbjct: 115 CGHAFHVECVDMWLRSHSTCPLCRCAVADEEDAKPVPPRAAPEADPESPN 164
>gi|449442204|ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449499624|ref|XP_004160867.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC+H FH +C+D+WL++N CP C+ V
Sbjct: 375 ELRELPCSHFFHKDCVDKWLKINALCPLCKAEV 407
>gi|353440930|gb|AEQ94064.1| MIP32849p1 [Drosophila melanogaster]
Length = 333
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 250 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 278
>gi|332017238|gb|EGI58021.1| RING finger protein 38 [Acromyrmex echinatior]
Length = 608
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 285 LEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
E LQ +R LPC+H FH +CID+WL+ N CP CR
Sbjct: 560 FEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICR 594
>gi|195108127|ref|XP_001998644.1| GI23522 [Drosophila mojavensis]
gi|193915238|gb|EDW14105.1| GI23522 [Drosophila mojavensis]
Length = 1020
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 930 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 958
>gi|159463100|ref|XP_001689780.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283768|gb|EDP09518.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1408
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRT 335
V+ +PCAH FH CID+WLR CP C+ V + A + +T
Sbjct: 610 VKRIPCAHEFHENCIDQWLRTKANCPICQPQVVKDYIKPATARKKT 655
>gi|125525596|gb|EAY73710.1| hypothetical protein OsI_01589 [Oryza sativa Indica Group]
gi|125570101|gb|EAZ11616.1| hypothetical protein OsJ_01480 [Oryza sativa Japonica Group]
Length = 258
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ R LP C H FH C+D WLRL+ CP CR SV
Sbjct: 198 ECRALPRCGHRFHASCVDGWLRLHTTCPLCRASV 231
>gi|348504004|ref|XP_003439552.1| PREDICTED: hypothetical protein LOC100690522 [Oreochromis
niloticus]
Length = 415
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H++H++CID WL+ N CP CR ++
Sbjct: 370 KLRMLPCFHDYHVQCIDRWLKDNTTCPICRANL 402
>gi|326517741|dbj|BAK03789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LPC H FH++C+D+WL++N CP C+ +
Sbjct: 349 ELRELPCNHLFHVQCVDKWLKINAVCPLCKTEI 381
>gi|328868880|gb|EGG17258.1| phosphatidylinositol transfer protein [Dictyostelium fasciculatum]
Length = 587
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ LPC H+FH ECID+WL++ CP C+ S+
Sbjct: 554 HLKTLPCLHHFHSECIDKWLKIKANCPICKSSL 586
>gi|116782843|gb|ABK22685.1| unknown [Picea sitchensis]
Length = 291
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 276 KEHMSTSLFLEVLQ----VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+E ++ S+ LE + VR LPC H FH CID WLR CP C+ V
Sbjct: 225 EEELTCSVCLEQVNEGELVRSLPCLHQFHASCIDPWLRQQATCPVCKFKV 274
>gi|56758082|gb|AAW27181.1| SJCHGC07006 protein [Schistosoma japonicum]
Length = 247
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++E Q+R + C H FH C+D+WL+ CP CR F
Sbjct: 204 YVESQQIRQMRCLHEFHASCVDKWLKTKRTCPLCRADAF 242
>gi|157820009|ref|NP_001100588.1| RING finger protein 6 [Rattus norvegicus]
gi|149034871|gb|EDL89591.1| ring finger protein (C3H2C3 type) 6 (predicted), isoform CRA_b
[Rattus norvegicus]
gi|149034873|gb|EDL89593.1| ring finger protein (C3H2C3 type) 6 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 668
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 620 SDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVL 660
>gi|330804127|ref|XP_003290050.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
gi|325079850|gb|EGC33431.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
Length = 102
Score = 47.8 bits (112), Expect = 0.010, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCP 315
+VR LPC H FH+ CID+WL++N CP
Sbjct: 69 EVRTLPCKHFFHVTCIDQWLKVNKVCP 95
>gi|115462405|ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|215701280|dbj|BAG92704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+++ +R LPCAH FH +C+D+WL++N CP C+ +
Sbjct: 341 YVDNDDLRELPCAHFFHKDCVDKWLKINALCPLCKAEI 378
>gi|426236501|ref|XP_004012206.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Ovis aries]
Length = 680
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 632 SDYVAGNKLRQLPCMHEFHIHCIDRWLSDNCTCPVCRQPVL 672
>gi|402901609|ref|XP_003913738.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Papio
anubis]
Length = 701
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 653 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQPVL 693
>gi|356551725|ref|XP_003544224.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
Length = 381
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F E +R LP C H FH+ CID WLR + CP CR + N +++ + ++SE+ +
Sbjct: 161 FQEEETLRLLPKCNHAFHVPCIDTWLRSHTNCPLCRAGIVSN-SVNSEAPAPVSNSEQEN 219
Query: 343 ASSVVTTTRYVRTQPS-SQSYLVRMQGLLSPVHMGNTR----LPNDTDIALQTVENGGVL 397
A+ R Q + + + GL S + G + N D +N GVL
Sbjct: 220 AN-------LGRNQDTLLDNSRINEGGLSSNMVAGESSEAIDESNSKDRVNDETQNNGVL 272
Query: 398 SATQNRIAMGPFSST 412
+ + MG S+T
Sbjct: 273 MNIEIQTEMGSVSTT 287
>gi|297742577|emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S + + +++R LPC H+FH C+D+WL +N CP C+ ++ +
Sbjct: 219 SAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKS 261
>gi|359806958|ref|NP_001241583.1| uncharacterized protein LOC100794614 [Glycine max]
gi|255645817|gb|ACU23399.1| unknown [Glycine max]
Length = 184
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 50/132 (37%), Gaps = 44/132 (33%)
Query: 189 MRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKA-VPTDCSECPICLEEFHVGNE 247
+R + ++A P +AA + + +++ LPK A ++C ICL EF G+E
Sbjct: 50 LRRLRLSSSATTPQSPTSAANKGVKKKVLRSLPKLTATAESAVKFADCAICLTEFAAGDE 109
Query: 248 WQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDE 306
+R LP C H FH+ CID
Sbjct: 110 ------------------------------------------IRVLPQCGHGFHVSCIDA 127
Query: 307 WLRLNVKCPRCR 318
WLR + CP CR
Sbjct: 128 WLRSHSSCPSCR 139
>gi|444729454|gb|ELW69870.1| RING finger protein 38 [Tupaia chinensis]
Length = 121
Score = 47.8 bits (112), Expect = 0.010, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 82 LRVLPCNHEFHAKCVDKWLKANRTCPICR 110
>gi|431920993|gb|ELK18762.1| RING finger protein 6 [Pteropus alecto]
Length = 678
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 630 SDYVAGNKLRRLPCMHEFHIHCIDRWLSENCTCPVCRQPVL 670
>gi|302774066|ref|XP_002970450.1| hypothetical protein SELMODRAFT_38830 [Selaginella moellendorffii]
gi|302793516|ref|XP_002978523.1| hypothetical protein SELMODRAFT_38829 [Selaginella moellendorffii]
gi|300153872|gb|EFJ20509.1| hypothetical protein SELMODRAFT_38829 [Selaginella moellendorffii]
gi|300161966|gb|EFJ28580.1| hypothetical protein SELMODRAFT_38830 [Selaginella moellendorffii]
Length = 67
Score = 47.8 bits (112), Expect = 0.010, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LP C+H FHIECID WL + CP CRCS+
Sbjct: 33 RLRLLPKCSHAFHIECIDTWLLSHSTCPLCRCSL 66
>gi|260782279|ref|XP_002586217.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
gi|229271313|gb|EEN42228.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
Length = 619
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++E +R LPC H FH C+D WL +N CP CR +V
Sbjct: 578 YIEGSVLRCLPCTHEFHAVCVDRWLGINASCPVCRHTV 615
>gi|149034870|gb|EDL89590.1| ring finger protein (C3H2C3 type) 6 (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149034872|gb|EDL89592.1| ring finger protein (C3H2C3 type) 6 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 679
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 631 SDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVL 671
>gi|449496857|ref|XP_004160245.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial [Cucumis
sativus]
Length = 299
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Query: 207 AAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLC 266
+ ++ A + I +LP +R KAV E ++ Q D G P C
Sbjct: 208 STEKGASDDQISQLPCWRYKAV------------EANINPRSQLDNS--NTGLLKEDPEC 253
Query: 267 KLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ A KE +VR LPC+H FH+ C+D+WL + CP C+
Sbjct: 254 CICLAKYIDKE-----------EVRQLPCSHVFHLRCVDKWLAITSSCPLCK 294
>gi|313241203|emb|CBY33486.1| unnamed protein product [Oikopleura dioica]
Length = 223
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR---CSVFPNLD 326
QVR LPC H H +CID WL+ N +CP C+ S+F N D
Sbjct: 181 QVRRLPCLHILHSDCIDPWLKDNNECPTCKFDISSIFENND 221
>gi|16604388|gb|AAL24200.1| At1g63170/F16M19_7 [Arabidopsis thaliana]
Length = 381
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A + I +L KF+ + V ++ + Q D +
Sbjct: 259 LYAVAEQEGASKEDIDQLTKFKFRKVGDT-------MKHTVDEEQGQGDSGGVMTECGTD 311
Query: 263 KPLCKLVHALMFLKEH--MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCS 320
P+ HAL + S + + ++R LPC H+FH C+D+WL +N CP C+ +
Sbjct: 312 SPV---EHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYN 368
Query: 321 VF 322
+
Sbjct: 369 IL 370
>gi|28573149|ref|NP_731367.2| murashka, isoform C [Drosophila melanogaster]
gi|28381204|gb|AAF54394.4| murashka, isoform C [Drosophila melanogaster]
gi|317008637|gb|ADU79246.1| GH10160p [Drosophila melanogaster]
Length = 1173
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 1090 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 1118
>gi|357604467|gb|EHJ64200.1| hypothetical protein KGM_14148 [Danaus plexippus]
Length = 873
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 291 RGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
R LPC H FH+EC+D+WL N CP CR + +L+ A
Sbjct: 833 RRLPCMHLFHMECVDQWLSTNKHCPICRVDIETHLNKDA 871
>gi|242052771|ref|XP_002455531.1| hypothetical protein SORBIDRAFT_03g012750 [Sorghum bicolor]
gi|241927506|gb|EES00651.1| hypothetical protein SORBIDRAFT_03g012750 [Sorghum bicolor]
Length = 261
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
+ R LP C H FH+ECID W R N CP CR
Sbjct: 156 KARALPRCGHRFHVECIDAWFRGNATCPLCR 186
>gi|21311909|ref|NP_083050.1| E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]
gi|367460080|ref|NP_001243014.1| E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]
gi|367460084|ref|NP_001243016.1| E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]
gi|81906111|sp|Q9DBU5.1|RNF6_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF6; AltName:
Full=RLIM-like protein
gi|12836151|dbj|BAB23526.1| unnamed protein product [Mus musculus]
gi|74212410|dbj|BAE30953.1| unnamed protein product [Mus musculus]
gi|74214016|dbj|BAE29425.1| unnamed protein product [Mus musculus]
Length = 667
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 619 SDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVL 659
>gi|351715177|gb|EHB18096.1| E3 ubiquitin-protein ligase RLIM [Heterocephalus glaber]
Length = 466
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H CID WL N CP CR +V
Sbjct: 420 YTEDNKLRKLPCSHEYHPHCIDRWLSENSTCPICRRTVL 458
>gi|301611422|ref|XP_002935238.1| PREDICTED: hypothetical protein LOC100491274 [Xenopus (Silurana)
tropicalis]
Length = 654
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
F + ++R LPC H +H+ C+D WLR N CP C + + + ++ R A+ R
Sbjct: 275 FTDGQELRILPCCHEYHLGCVDPWLRQNHTCPLCMYDILEQMAMQMRTHRRGAEGTR 331
>gi|242044574|ref|XP_002460158.1| hypothetical protein SORBIDRAFT_02g023600 [Sorghum bicolor]
gi|241923535|gb|EER96679.1| hypothetical protein SORBIDRAFT_02g023600 [Sorghum bicolor]
Length = 408
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F + ++R LP C H FH+ CID WLR + CP CR V + +L A SS
Sbjct: 187 FADHDRLRLLPLCGHAFHVACIDVWLRSSATCPLCRTKV-------SARHLAAATDAPSS 239
Query: 343 ASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQN 402
++ V + + Q + ++ PV +G R N D A + G +
Sbjct: 240 VATDVEEQKPQQDQAPPDAVEAASSSVVLPVRLG--RFKNVDDDAESSSSTGATSRIDRR 297
Query: 403 RI-AMGPF 409
R +MG +
Sbjct: 298 RCYSMGSY 305
>gi|4510378|gb|AAD21466.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 180
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
+R LP C H FH++CID WLRLN CP CR S P
Sbjct: 123 LRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLP 157
>gi|414868792|tpg|DAA47349.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 398
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
++R LP CAH FH +CID WLR + CP CR +V
Sbjct: 162 ELRALPLCAHAFHADCIDVWLRAHASCPLCRAAV 195
>gi|313233477|emb|CBY09649.1| unnamed protein product [Oikopleura dioica]
Length = 223
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR---CSVFPNLD 326
QVR LPC H H +CID WL+ N +CP C+ S+F N D
Sbjct: 181 QVRRLPCLHILHSDCIDPWLKDNNECPTCKFDISSIFENND 221
>gi|187951087|gb|AAI38546.1| Ring finger protein (C3H2C3 type) 6 [Mus musculus]
Length = 667
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 619 SDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVL 659
>gi|118352226|ref|XP_001009386.1| RING finger protein [Tetrahymena thermophila]
gi|89291153|gb|EAR89141.1| RING finger protein [Tetrahymena thermophila SB210]
Length = 1202
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E +V+ L C H FHI C+D+WL++ CP CR ++
Sbjct: 1144 FDEGEKVKELNCEHRFHISCVDDWLKIKGSCPLCRQNL 1181
>gi|195395466|ref|XP_002056357.1| GJ10273 [Drosophila virilis]
gi|194143066|gb|EDW59469.1| GJ10273 [Drosophila virilis]
Length = 1174
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 1085 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 1113
>gi|154271009|ref|XP_001536358.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409581|gb|EDN05025.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 569
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F++ VR LPC H FH EC+D WL +NV CP CR NL T +
Sbjct: 322 TDDFVKGQDVRLLPCKHKFHPECVDPWL-INVSGTCPLCRV------------NLNTEEP 368
Query: 339 ERSSASSVVTTTRYVRTQPSSQ 360
+ S + T+ + P+SQ
Sbjct: 369 DVDSDDTATQTSTSRASTPTSQ 390
>gi|357118344|ref|XP_003560915.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brachypodium
distachyon]
Length = 449
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
S F + ++R LP C+H FH +CI EWL +V CP CRCS+ P
Sbjct: 169 SEFDDDEELRLLPKCSHAFHPDCIGEWLAGHVTCPVCRCSLKP 211
>gi|20530241|gb|AAK84435.1| RNF6 protein [Mus musculus]
gi|148673854|gb|EDL05801.1| ring finger protein (C3H2C3 type) 6, isoform CRA_b [Mus musculus]
gi|148673855|gb|EDL05802.1| ring finger protein (C3H2C3 type) 6, isoform CRA_b [Mus musculus]
Length = 667
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 619 SDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVL 659
>gi|432117387|gb|ELK37731.1| E3 ubiquitin-protein ligase RNF6 [Myotis davidii]
Length = 677
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 639 KLRQLPCMHEFHIHCIDRWLSENCTCPVCRHPVL 672
>gi|115477677|ref|NP_001062434.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|42407550|dbj|BAD10755.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|42408731|dbj|BAD09949.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|113624403|dbj|BAF24348.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|125604240|gb|EAZ43565.1| hypothetical protein OsJ_28186 [Oryza sativa Japonica Group]
gi|215706910|dbj|BAG93370.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
F E + LPC H++H ECI++WL+LN CP C V + D A
Sbjct: 260 FEEGESLVALPCKHSYHSECINQWLQLNKVCPMCSAEVPTSQDTRA 305
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A EA + LP++R F NE ++ V +
Sbjct: 2188 LYAVAGQEGASEADLSMLPRYR-----------------FEANNEEKSGVGAGTM-IPTE 2229
Query: 263 KPLCKLVHALMFLKEH----MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
L + + L E + S + + ++ LPC H+FH CI +WL++N CP C+
Sbjct: 2230 TSSGYLANERILLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCK 2289
Query: 319 CSVF 322
++
Sbjct: 2290 YNIL 2293
>gi|347969289|ref|XP_003436399.1| AGAP013357-PA [Anopheles gambiae str. PEST]
gi|333468455|gb|EGK96956.1| AGAP013357-PA [Anopheles gambiae str. PEST]
Length = 2020
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
VR LPC H FH +C+D+WL N CP CR + P S+
Sbjct: 1891 DVRRLPCMHLFHKDCVDQWLVTNKHCPICRVDIEPRTSSSS 1931
>gi|224055501|ref|XP_002298515.1| predicted protein [Populus trichocarpa]
gi|222845773|gb|EEE83320.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 45/112 (40%)
Query: 214 EALIQELPKFRLKAV--PTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHA 271
+A I LP F+ K + P + +CP+CL EF
Sbjct: 81 QAFIDALPVFQYKEIVGPKEPFDCPVCLCEFS---------------------------- 112
Query: 272 LMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
E ++R LP C+H FHI CID WL N CP CR ++F
Sbjct: 113 --------------EKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRGTLF 150
>gi|383413211|gb|AFH29819.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
gi|384948634|gb|AFI37922.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 685
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|367460082|ref|NP_001243015.1| E3 ubiquitin-protein ligase RNF6 isoform 2 [Mus musculus]
Length = 678
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 630 SDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVL 670
>gi|198454408|ref|XP_002137865.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132780|gb|EDY68423.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 890
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WLR N CP CR +
Sbjct: 808 LRVLPCSHEFHAKCVDKWLRSNRTCPICRGNA 839
>gi|148673853|gb|EDL05800.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Mus musculus]
Length = 678
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 637 KLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVL 670
>gi|432094725|gb|ELK26205.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 795
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ E ++R LPC+H +H+ CID WL N CP CR V
Sbjct: 754 YTEGNKLRILPCSHEYHVHCIDRWLSDNSTCPICRREV 791
>gi|291392915|ref|XP_002712839.1| PREDICTED: ring finger protein 6 [Oryctolagus cuniculus]
Length = 683
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 635 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 675
>gi|125527404|gb|EAY75518.1| hypothetical protein OsI_03422 [Oryza sativa Indica Group]
Length = 304
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC H FH++C+D WLR+ CP C+
Sbjct: 266 YKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCK 300
>gi|125562449|gb|EAZ07897.1| hypothetical protein OsI_30152 [Oryza sativa Indica Group]
Length = 300
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
F E + LPC H++H ECI++WL+LN CP C V + D A
Sbjct: 255 FEEGESLVALPCKHSYHSECINQWLQLNKVCPMCSAEVPTSQDTRA 300
>gi|299471057|emb|CBN78917.1| protein binding / ubiquitin-protein ligase/ zinc ion binding
[Ectocarpus siliculosus]
Length = 235
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+VR +PC H FH ECID WLR N CP C+
Sbjct: 201 RVRIIPCLHQFHTECIDPWLRQNAICPVCK 230
>gi|224105475|ref|XP_002313823.1| predicted protein [Populus trichocarpa]
gi|222850231|gb|EEE87778.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
VR LP C+H FH++CID WLR + CP CR +F
Sbjct: 110 VRTLPVCSHAFHVDCIDIWLRSHANCPLCRAGIF 143
>gi|397495091|ref|XP_003818395.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Pan paniscus]
gi|397495093|ref|XP_003818396.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Pan paniscus]
gi|397495095|ref|XP_003818397.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Pan paniscus]
Length = 685
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|297274144|ref|XP_002800736.1| PREDICTED: RING finger protein 6 isoform 4 [Macaca mulatta]
Length = 745
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 697 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 737
>gi|255950158|ref|XP_002565846.1| Pc22g19430 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592863|emb|CAP99231.1| Pc22g19430 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 510
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFP 323
T F++ +R LPC H FH+ECID WL +NV CP CR + P
Sbjct: 330 TDDFIKGQDLRVLPCNHQFHMECIDPWL-MNVSGTCPLCRIDLNP 373
>gi|125525595|gb|EAY73709.1| hypothetical protein OsI_01588 [Oryza sativa Indica Group]
Length = 249
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ R LP C H FH+ECID W R N CP CR V
Sbjct: 159 KARALPRCGHRFHVECIDAWFRENSTCPLCRADV 192
>gi|20804599|dbj|BAB92290.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|125571727|gb|EAZ13242.1| hypothetical protein OsJ_03165 [Oryza sativa Japonica Group]
gi|215712224|dbj|BAG94351.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC H FH++C+D WLR+ CP C+
Sbjct: 266 YKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCK 300
>gi|380815360|gb|AFE79554.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 685
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|145336373|ref|NP_174614.2| RING-H2 finger protein ATL58 [Arabidopsis thaliana]
gi|68565103|sp|Q570X5.1|ATL58_ARATH RecName: Full=RING-H2 finger protein ATL58
gi|62318524|dbj|BAD94869.1| hypothetical protein [Arabidopsis thaliana]
gi|332193478|gb|AEE31599.1| RING-H2 finger protein ATL58 [Arabidopsis thaliana]
Length = 261
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVR 354
C H FH++CID WL + CP CR ++ P+ R+ S+ S+V+ V
Sbjct: 119 CKHTFHMDCIDLWLTSHTTCPLCRLALIPS---------RSRQSQDDPVPSLVSPDEEVS 169
Query: 355 TQPSSQSY---LVRMQGLLSPV-HMGNTRLPNDTDIALQTVENGGVLSATQNR 403
+QP S+ +V Q PV H G + P + V + GV S +++
Sbjct: 170 SQPESEPVNHRVVSTQPESEPVNHSGVSSQPESQPV----VNHRGVSSQPESQ 218
>gi|417411075|gb|JAA51991.1| Putative ring finger protein 44, partial [Desmodus rotundus]
Length = 482
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 437 FEVRQLLRVLPCGHEFHAKCVDKWLKANRTCPICRADA 474
>gi|194744417|ref|XP_001954691.1| GF16619 [Drosophila ananassae]
gi|190627728|gb|EDV43252.1| GF16619 [Drosophila ananassae]
Length = 1226
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERS 341
+LF VR LPC H FH +C+D+WL N CP CR + ++ AL++ + ++ +
Sbjct: 1162 TLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMANDALASSSSGVTDAA 1221
Query: 342 SASSV 346
S++++
Sbjct: 1222 SSAAL 1226
>gi|126327391|ref|XP_001366817.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Monodelphis domestica]
Length = 684
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 643 KLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 676
>gi|51476208|emb|CAH18094.1| hypothetical protein [Homo sapiens]
Length = 685
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|5174653|ref|NP_005968.1| E3 ubiquitin-protein ligase RNF6 [Homo sapiens]
gi|34305293|ref|NP_898864.1| E3 ubiquitin-protein ligase RNF6 [Homo sapiens]
gi|34305295|ref|NP_898865.1| E3 ubiquitin-protein ligase RNF6 [Homo sapiens]
gi|13124536|sp|Q9Y252.1|RNF6_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF6
gi|4583652|emb|CAB40413.1| RING-H2 [Homo sapiens]
gi|4583654|emb|CAB40414.1| RING-H2 [Homo sapiens]
gi|12331002|gb|AAG49400.1| ring-H2 protein [Homo sapiens]
gi|21961523|gb|AAH34688.1| Ring finger protein (C3H2C3 type) 6 [Homo sapiens]
gi|119628785|gb|EAX08380.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|119628786|gb|EAX08381.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|119628787|gb|EAX08382.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|119628788|gb|EAX08383.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|123981156|gb|ABM82407.1| ring finger protein (C3H2C3 type) 6 [synthetic construct]
gi|124000631|gb|ABM87824.1| ring finger protein (C3H2C3 type) 6 [synthetic construct]
gi|189065505|dbj|BAG35344.1| unnamed protein product [Homo sapiens]
Length = 685
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|356561335|ref|XP_003548938.1| PREDICTED: uncharacterized protein LOC100790855 [Glycine max]
Length = 336
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 215 ALIQELPKFRLKAVPTDCSECPICLEEFHVGNEW----QADVKFYPYGFTSHKPLCK--L 268
ALI P + P + + L + VG+ + Q + P G++S P +
Sbjct: 152 ALILRGPNLSHTSSPNESNAVGSSLNDLVVGSGFDLLLQHLAQIGPGGYSSVNPPAQKAA 211
Query: 269 VHAL--MFLKEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ AL + +E + ++ LE ++V + +PC H FH +CI WL+L+ CP CR +
Sbjct: 212 IEALPSVTSEEKLQCTVCLEDVEVGSEAKEMPCKHKFHGDCIVSWLKLHGSCPVCRFQM- 270
Query: 323 PNLDLSALSNLRTADSERSSASSV 346
P+ D + +N+ + + ++ V
Sbjct: 271 PSEDSTLEANVGVGNGDNQNSELV 294
>gi|149730038|ref|XP_001490895.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Equus caballus]
Length = 677
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 636 KLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 669
>gi|114649066|ref|XP_509593.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 9 [Pan
troglodytes]
gi|114649068|ref|XP_001156347.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 5 [Pan
troglodytes]
gi|114649070|ref|XP_001156405.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 6 [Pan
troglodytes]
gi|114649072|ref|XP_001156461.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 7 [Pan
troglodytes]
gi|114649074|ref|XP_001156522.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 8 [Pan
troglodytes]
gi|410210058|gb|JAA02248.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410210060|gb|JAA02249.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410261394|gb|JAA18663.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410261396|gb|JAA18664.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410295664|gb|JAA26432.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410333895|gb|JAA35894.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
Length = 685
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|414884508|tpg|DAA60522.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 359
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + +++R LPC H+FH CID+WL +N CP C+
Sbjct: 312 YEDGVELRELPCNHHFHCSCIDKWLHINATCPLCK 346
>gi|395520804|ref|XP_003764513.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Sarcophilus harrisii]
Length = 688
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 647 KLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 680
>gi|355754582|gb|EHH58483.1| E3 ubiquitin-protein ligase RNF6 [Macaca fascicularis]
Length = 701
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 653 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 693
>gi|298257683|gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]
Length = 197
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 42/113 (37%), Gaps = 44/113 (38%)
Query: 208 AQREAVEALIQELPKFRLKAVPTDC-SECPICLEEFHVGNEWQADVKFYPYGFTSHKPLC 266
A + + +++ LPKF A D SEC ICL EF VG E
Sbjct: 79 ANKGLKKKVLKSLPKFNYGAEHADKFSECAICLAEFAVGEE------------------- 119
Query: 267 KLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
+R LP C H FH+ CID WL + CP CR
Sbjct: 120 -----------------------IRVLPQCGHGFHVGCIDTWLGSHSSCPSCR 149
>gi|242063150|ref|XP_002452864.1| hypothetical protein SORBIDRAFT_04g033820 [Sorghum bicolor]
gi|241932695|gb|EES05840.1| hypothetical protein SORBIDRAFT_04g033820 [Sorghum bicolor]
Length = 423
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
C+H FH +CI EWL +V CP CRC++ PN
Sbjct: 147 CSHAFHPDCIGEWLASHVTCPVCRCNLDPN 176
>gi|295662428|ref|XP_002791768.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279894|gb|EEH35460.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 630
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFP----NLDLSALSNLR 334
T F++ VR LPC H FH EC+D WL +NV CP CR ++ P N D S +
Sbjct: 378 TDDFIKGQDVRLLPCQHKFHPECVDPWL-INVSGTCPLCRVNLNPPDSDNADGSDHDHNS 436
Query: 335 TADSERSSASSVVTTTRYVRTQPSSQSYLVRMQGL 369
+ S T R++ + + + R GL
Sbjct: 437 EDPTRSPSPPQNSHTNRFLPPLRNPRGFSRRYHGL 471
>gi|67969356|dbj|BAE01030.1| unnamed protein product [Macaca fascicularis]
Length = 701
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 653 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 693
>gi|426374972|ref|XP_004054327.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Gorilla
gorilla gorilla]
gi|426374974|ref|XP_004054328.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Gorilla
gorilla gorilla]
gi|426374976|ref|XP_004054329.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 3 [Gorilla
gorilla gorilla]
gi|426374978|ref|XP_004054330.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 4 [Gorilla
gorilla gorilla]
gi|426374980|ref|XP_004054331.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 5 [Gorilla
gorilla gorilla]
Length = 685
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|239615043|gb|EEQ92030.1| RING finger domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 654
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFP 323
T F++ VR LPC H FH EC+D WL +NV CP CR ++ P
Sbjct: 363 TDDFVKGQDVRLLPCQHKFHPECVDPWL-INVSGTCPLCRINLNP 406
>gi|255541456|ref|XP_002511792.1| ring finger protein, putative [Ricinus communis]
gi|223548972|gb|EEF50461.1| ring finger protein, putative [Ricinus communis]
Length = 201
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 18/101 (17%)
Query: 286 EVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTAD-SERSSA 343
EVL++ +P C HNFH+ CID WLR CP CR FP D ++R A S S
Sbjct: 98 EVLRI--MPKCGHNFHLSCIDVWLRKQSTCPVCR---FPIQDTLEAKHMRQATMSMVRSI 152
Query: 344 SSVVTTTRYVRT-----------QPSSQSYLVRMQGLLSPV 373
S T+T + R S+Q +LV + G P
Sbjct: 153 DSPETSTEHSRQWLLPGPDRSMGNASNQEHLVPVSGSPEPA 193
>gi|147777624|emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
Length = 1377
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
S F E +R LP C+H FH++CID WL+ + CP CR ++ P
Sbjct: 1149 SEFEEDESLRLLPKCSHAFHVQCIDTWLKSHSNCPLCRANIVP 1191
>gi|403254025|ref|XP_003919782.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403254027|ref|XP_003919783.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403254029|ref|XP_003919784.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 3 [Saimiri
boliviensis boliviensis]
gi|403254031|ref|XP_003919785.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 685
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|351695469|gb|EHA98387.1| RING finger protein 6 [Heterocephalus glaber]
Length = 676
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 635 KLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 668
>gi|344284701|ref|XP_003414103.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Loxodonta africana]
Length = 685
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|194700864|gb|ACF84516.1| unknown [Zea mays]
gi|414884507|tpg|DAA60521.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 356
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + +++R LPC H+FH CID+WL +N CP C+
Sbjct: 309 YEDGVELRELPCNHHFHCSCIDKWLHINATCPLCK 343
>gi|109120346|ref|XP_001117726.1| PREDICTED: RING finger protein 6 isoform 1 [Macaca mulatta]
gi|297274140|ref|XP_002800734.1| PREDICTED: RING finger protein 6 isoform 2 [Macaca mulatta]
gi|297274142|ref|XP_002800735.1| PREDICTED: RING finger protein 6 isoform 3 [Macaca mulatta]
gi|355700880|gb|EHH28901.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 701
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 653 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 693
>gi|432102802|gb|ELK30276.1| RING finger protein 44 [Myotis davidii]
Length = 457
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WL+ N CP CR
Sbjct: 418 LRVLPCSHEFHTKCVDKWLKANRTCPICRADA 449
>gi|358337342|dbj|GAA55711.1| E3 ubiquitin-protein ligase RNF12-B [Clonorchis sinensis]
Length = 483
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVT 348
Q+R LPC H FH +CID W + CP+CR V L L R RS ASS
Sbjct: 266 QLRHLPCGHAFHKKCIDAWFNESSTCPKCRAGV--RTGLKRLERNRN----RSYASSRNA 319
Query: 349 TTRYVR 354
R +R
Sbjct: 320 PVRAIR 325
>gi|323388655|gb|ADX60132.1| WRKY transcription factor [Zea mays]
gi|414884506|tpg|DAA60520.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + +++R LPC H+FH CID+WL +N CP C+
Sbjct: 310 YEDGVELRELPCNHHFHCSCIDKWLHINATCPLCK 344
>gi|395816981|ref|XP_003781957.1| PREDICTED: RING finger protein 44 isoform 1 [Otolemur garnettii]
Length = 432
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCSHEFHTKCVDKWLKANRTCPICRADA 424
>gi|226495149|ref|NP_001140381.1| uncharacterized LOC100272434 [Zea mays]
gi|194699246|gb|ACF83707.1| unknown [Zea mays]
gi|194700528|gb|ACF84348.1| unknown [Zea mays]
gi|414586980|tpg|DAA37551.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 419
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F + VR LP CAH FH+ CID WLR +V CP CR V
Sbjct: 207 FQDGELVRLLPKCAHAFHVPCIDTWLRAHVNCPVCRSDVL 246
>gi|73993400|ref|XP_534526.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Canis lupus
familiaris]
gi|345790296|ref|XP_003433344.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Canis lupus
familiaris]
Length = 683
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 635 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 675
>gi|194373411|dbj|BAG56801.1| unnamed protein product [Homo sapiens]
Length = 329
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 288 KLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 321
>gi|170061533|ref|XP_001866274.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167879738|gb|EDS43121.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 327
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSAL 330
S F+ VR LPC H FH +C+D+WL N CP CR + ++S +
Sbjct: 279 SQFIPQEDVRRLPCMHLFHKDCVDQWLVTNKHCPICRVDIEVQKNISDI 327
>gi|123427078|ref|XP_001307175.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121888789|gb|EAX94245.1| hypothetical protein TVAG_480620 [Trichomonas vaginalis G3]
Length = 129
Score = 47.4 bits (111), Expect = 0.013, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 237 ICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCA 296
IC E N A + PY + + C + +M E + T LPCA
Sbjct: 56 ICYER---KNNGAALDRIIPYEYKNSPEKCAICQDMMNCGETVVT-----------LPCA 101
Query: 297 HNFHIECIDEWLRLNVKCPRCRCSV 321
H FH CI WLR N CP CR +
Sbjct: 102 HTFHGNCIYHWLRNNDDCPICRSVI 126
>gi|356559187|ref|XP_003547882.1| PREDICTED: RING-H2 finger protein ATL80-like [Glycine max]
Length = 201
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 45/131 (34%), Gaps = 54/131 (41%)
Query: 191 GIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDC--SECPICLEEFHVGNEW 248
G G+ A + GL + ++ LPKF C SEC ICL EF G+E
Sbjct: 63 GAGESPATANKGLK---------KKVVNSLPKFTYAGGGDRCKWSECAICLTEFGAGDE- 112
Query: 249 QADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEW 307
+R LP C H FH+ C+D W
Sbjct: 113 -----------------------------------------IRVLPQCGHGFHVACVDTW 131
Query: 308 LRLNVKCPRCR 318
L + CP CR
Sbjct: 132 LASHSSCPSCR 142
>gi|296203583|ref|XP_002748980.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Callithrix
jacchus]
gi|296203585|ref|XP_002748981.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Callithrix
jacchus]
Length = 685
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|24645397|ref|NP_649902.2| murashka, isoform A [Drosophila melanogaster]
gi|24645399|ref|NP_731366.1| murashka, isoform B [Drosophila melanogaster]
gi|20151609|gb|AAM11164.1| LD30050p [Drosophila melanogaster]
gi|23170810|gb|AAN13432.1| murashka, isoform A [Drosophila melanogaster]
gi|23170811|gb|AAN13433.1| murashka, isoform B [Drosophila melanogaster]
gi|220947288|gb|ACL86187.1| mura-PA [synthetic construct]
gi|220956746|gb|ACL90916.1| mura-PA [synthetic construct]
Length = 868
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WLR N CP CR +
Sbjct: 785 LRVLPCSHEFHAKCVDKWLRSNRTCPICRGNA 816
>gi|357118595|ref|XP_003561037.1| PREDICTED: RING-H2 finger protein ATL46-like [Brachypodium
distachyon]
Length = 362
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
PC H FH++CID WL N CP CRC++
Sbjct: 161 PCGHAFHVDCIDTWLLSNSTCPLCRCALL 189
>gi|425770968|gb|EKV09427.1| hypothetical protein PDIP_65090 [Penicillium digitatum Pd1]
gi|425776579|gb|EKV14794.1| hypothetical protein PDIG_30710 [Penicillium digitatum PHI26]
Length = 510
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFP 323
T F++ +R LPC H FH+ECID WL +NV CP CR + P
Sbjct: 332 TDDFVKGQDLRVLPCNHQFHMECIDPWL-MNVSGTCPLCRIDLNP 375
>gi|410947141|ref|XP_003980311.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Felis catus]
gi|410947143|ref|XP_003980312.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Felis catus]
Length = 683
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 635 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 675
>gi|395816983|ref|XP_003781958.1| PREDICTED: RING finger protein 44 isoform 2 [Otolemur garnettii]
Length = 351
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WL+ N CP CR
Sbjct: 312 LRVLPCSHEFHTKCVDKWLKANRTCPICR 340
>gi|255587015|ref|XP_002534099.1| ring finger protein, putative [Ricinus communis]
gi|223525847|gb|EEF28281.1| ring finger protein, putative [Ricinus communis]
Length = 344
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F E +R LP C+H FHI CID WLR + CP CR V + N S
Sbjct: 98 FQEDESLRLLPKCSHAFHIPCIDTWLRSHKNCPLCRAPVISD-------NFDVQVELPES 150
Query: 343 ASSVVTTTRYVRTQPSS-QSYLVRMQGLLSPVHMGNTRLPNDTDIAL 388
SS +++T +T+ S+ S L+ + + R +DT+ AL
Sbjct: 151 TSSDLSSTGGSQTENSTNNSGLITISNSVGEDGTDEVRDGDDTNCAL 197
>gi|195153180|ref|XP_002017507.1| GL21484 [Drosophila persimilis]
gi|194112564|gb|EDW34607.1| GL21484 [Drosophila persimilis]
Length = 636
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 556 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 584
>gi|148234951|ref|NP_001090211.1| E3 ubiquitin-protein ligase arkadia-B [Xenopus laevis]
gi|82237141|sp|Q6NRV8.1|R111B_XENLA RecName: Full=E3 ubiquitin-protein ligase arkadia-B; AltName:
Full=RING finger protein 111-B
gi|47124697|gb|AAH70603.1| Rnf111 protein [Xenopus laevis]
Length = 959
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 912 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 951
>gi|452823951|gb|EME30957.1| hypothetical protein Gasu_17240 [Galdieria sulphuraria]
Length = 406
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 262 HKPLCKLVHALMFLKEHMSTSLFLEVLQ----VRGLPCAHNFHIECIDEWLRLNVKCPRC 317
K C ++F H S+ LE +R LPC H FH+ CID+WL ++ CP C
Sbjct: 286 EKDNCIKTDTMLFRYVHDFCSICLENYSNSDSLRVLPCLHFFHVVCIDKWLMMDKACPLC 345
Query: 318 RCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYV 353
+ + L S+ + T++ ++ SS V T+ +
Sbjct: 346 KWDIDRGLLYSSWEDSWTSEDHPNNYSSAVATSSAI 381
>gi|355716975|gb|AES05783.1| ring finger protein 6 [Mustela putorius furo]
Length = 435
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 387 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 427
>gi|326495024|dbj|BAJ85607.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533222|dbj|BAJ93583.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 253
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSV 321
C H+FH+EC+D WLR + CP CRC+V
Sbjct: 111 CGHSFHVECVDMWLRSHSTCPLCRCAV 137
>gi|242061152|ref|XP_002451865.1| hypothetical protein SORBIDRAFT_04g008890 [Sorghum bicolor]
gi|241931696|gb|EES04841.1| hypothetical protein SORBIDRAFT_04g008890 [Sorghum bicolor]
Length = 234
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
VR LP C H FH +CID WLR + CP CR SV P D
Sbjct: 179 VRQLPACQHVFHRDCIDPWLRAHATCPVCRSSVLPPPD 216
>gi|242095138|ref|XP_002438059.1| hypothetical protein SORBIDRAFT_10g007490 [Sorghum bicolor]
gi|241916282|gb|EER89426.1| hypothetical protein SORBIDRAFT_10g007490 [Sorghum bicolor]
Length = 467
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
S F + ++R LP C+H FH +CI EWL +V CP CRC++ P
Sbjct: 165 SEFEDDEELRLLPSCSHAFHPDCIGEWLAGHVTCPVCRCNLDP 207
>gi|116791462|gb|ABK25988.1| unknown [Picea sitchensis]
Length = 246
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F+E +VR LP C H+FH +CID WL N CP CR S+
Sbjct: 132 FMEGEKVRVLPECCHSFHADCIDTWLLSNASCPSCRHSLL 171
>gi|444515701|gb|ELV10953.1| E3 ubiquitin-protein ligase RNF6 [Tupaia chinensis]
Length = 574
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 533 KLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 566
>gi|413918895|gb|AFW58827.1| putative RING zinc finger domain superfamily protein [Zea mays]
gi|413918896|gb|AFW58828.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 445
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH ECIDEWLR CP C+
Sbjct: 413 IRHLPCFHKFHKECIDEWLRRKKLCPVCK 441
>gi|396081204|gb|AFN82822.1| hypothetical protein EROM_040540 [Encephalitozoon romaleae SJ-2008]
Length = 246
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++++ LPC H+FH ECIDEWL L CP C+ ++
Sbjct: 199 IKLKLLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|332248066|ref|XP_003273182.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Nomascus
leucogenys]
gi|332248068|ref|XP_003273183.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Nomascus
leucogenys]
gi|332248070|ref|XP_003273184.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 3 [Nomascus
leucogenys]
gi|332248072|ref|XP_003273185.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 4 [Nomascus
leucogenys]
gi|332248074|ref|XP_003273186.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 5 [Nomascus
leucogenys]
Length = 685
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 637 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|255565501|ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
gi|223537045|gb|EEF38681.1| zinc finger protein, putative [Ricinus communis]
Length = 254
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F E V+ +P C H FH+ECI+ WL+L+V CP CR + F
Sbjct: 139 FEEKETVKSIPYCKHMFHLECIETWLKLHVTCPVCRGTQF 178
>gi|224096674|ref|XP_002310694.1| predicted protein [Populus trichocarpa]
gi|222853597|gb|EEE91144.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR----------CSVFPNLDLSA 329
F+E +VR LP C H+FH+ CID WLR + CP CR CS FP SA
Sbjct: 112 FVEGDEVRVLPQCGHSFHVVCIDTWLRSHSSCPSCRQILVVARCQKCSHFPASTSSA 168
>gi|260783467|ref|XP_002586796.1| hypothetical protein BRAFLDRAFT_102948 [Branchiostoma floridae]
gi|229271922|gb|EEN42807.1| hypothetical protein BRAFLDRAFT_102948 [Branchiostoma floridae]
Length = 518
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++E +R LPC H FH C+D WL +N CP CR +V
Sbjct: 477 YIEGSVLRCLPCTHEFHAVCVDRWLGINASCPVCRHTV 514
>gi|15242616|ref|NP_198841.1| RING-H2 finger protein ATL46 [Arabidopsis thaliana]
gi|68565290|sp|Q9FL07.1|ATL46_ARATH RecName: Full=RING-H2 finger protein ATL46
gi|10177512|dbj|BAB10906.1| RING zinc finger protein-like [Arabidopsis thaliana]
gi|51970768|dbj|BAD44076.1| RING finger -like protein [Arabidopsis thaliana]
gi|332007142|gb|AED94525.1| RING-H2 finger protein ATL46 [Arabidopsis thaliana]
Length = 376
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF--------PNLDLSALSNLR 334
F E ++R LP C+H FH+ CID WL+ N CP CR ++F P D +
Sbjct: 150 FSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDE 209
Query: 335 TADSERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGN-TRLPNDTDIALQTVEN 393
+E S ++ +V +G+L PV +G RL N + Q V
Sbjct: 210 EGVTENGSQKTMEIQE------------IVVEKGVL-PVRLGKFKRLDNVGNGQGQDVVA 256
Query: 394 GGVLSATQ 401
GG S++
Sbjct: 257 GGETSSSN 264
>gi|67539758|ref|XP_663653.1| hypothetical protein AN6049.2 [Aspergillus nidulans FGSC A4]
gi|40738834|gb|EAA58024.1| hypothetical protein AN6049.2 [Aspergillus nidulans FGSC A4]
gi|259479766|tpe|CBF70288.1| TPA: RING finger domain protein, putative (AFU_orthologue;
AFUA_2G09640) [Aspergillus nidulans FGSC A4]
Length = 531
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F++ +R LPC H FH ECID WL +NV CP CR + P A D
Sbjct: 371 TDDFIKGQDLRVLPCNHQFHPECIDPWL-VNVSGTCPLCRIDLNP---PQAEGETENQDG 426
Query: 339 ERSSASSVVTTTRYVRTQPSSQSYLVR 365
E S + T QP+ +++ R
Sbjct: 427 ETGSEENAATN-----NQPAEETHTHR 448
>gi|326527733|dbj|BAK08141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADS-- 338
S F + ++R LP C+H FH +CI EWL +V CP CR ++ P+ D + +S
Sbjct: 208 SEFEDEDRLRLLPKCSHAFHPDCIGEWLASHVTCPVCRRNLDPSKDAGSDDEASARNSNP 267
Query: 339 ---ERSSASSVVTTTRY 352
E +SASS + R+
Sbjct: 268 PAPEANSASSEIAVLRH 284
>gi|301777678|ref|XP_002924257.1| PREDICTED: RING finger protein 6-like [Ailuropoda melanoleuca]
gi|281345511|gb|EFB21095.1| hypothetical protein PANDA_013565 [Ailuropoda melanoleuca]
Length = 683
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S ++ ++R LPC H FHI CID WL N CP CR V
Sbjct: 635 SDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 675
>gi|66475368|ref|XP_627500.1| ring finger, membrane associated, possible signal peptide
[Cryptosporidium parvum Iowa II]
gi|32398713|emb|CAD98673.1| hypothetical predicted zinc-finger protein, unknown function
[Cryptosporidium parvum]
gi|46228961|gb|EAK89810.1| ring finger, membrane associated, possible signal peptide
[Cryptosporidium parvum Iowa II]
Length = 207
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSE 339
VR LPC H +H CIDEW+++ CP C N++L+++ N D E
Sbjct: 123 VRKLPCKHIYHFNCIDEWVKIKSNCPLC------NINLTSIYNQNIRDRE 166
>gi|326505186|dbj|BAK02980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC H FH++C+D WLR+ CP C+
Sbjct: 267 YREKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCK 301
>gi|298705326|emb|CBJ49016.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1372
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNL 325
F E +R LPC H FH +C+DEWL L+V CP C+ S L
Sbjct: 1187 FEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGL 1228
>gi|118404362|ref|NP_001072805.1| E3 ubiquitin-protein ligase arkadia [Xenopus (Silurana) tropicalis]
gi|123914777|sp|Q0V9R0.1|RN111_XENTR RecName: Full=E3 ubiquitin-protein ligase arkadia; AltName:
Full=RING finger protein 111
gi|111305672|gb|AAI21429.1| ring finger protein 111 [Xenopus (Silurana) tropicalis]
Length = 954
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 907 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 946
>gi|169599386|ref|XP_001793116.1| hypothetical protein SNOG_02512 [Phaeosphaeria nodorum SN15]
gi|111069604|gb|EAT90724.1| hypothetical protein SNOG_02512 [Phaeosphaeria nodorum SN15]
Length = 523
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F + +R LPC H FH EC+D WL LNV CP CR + P SN T DS
Sbjct: 356 TEDFEKGQDLRVLPCDHKFHPECVDPWL-LNVSGTCPLCRVDLRP-----VTSNSSTPDS 409
Query: 339 E 339
+
Sbjct: 410 D 410
>gi|6599239|emb|CAB63747.1| hypothetical protein [Homo sapiens]
Length = 366
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 325 KLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 358
>gi|82217359|sp|Q90ZT7.1|R111A_XENLA RecName: Full=E3 ubiquitin-protein ligase arkadia-A; AltName:
Full=RING finger protein 111-A
gi|13752371|gb|AAK38637.1|AF329847_1 ring finger-H2 protein, partial [Xenopus laevis]
Length = 923
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 876 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 915
>gi|224071365|ref|XP_002303424.1| predicted protein [Populus trichocarpa]
gi|222840856|gb|EEE78403.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF----------PNLDLSAL 330
S F E +R LP C+H FH+ CID WLR + CP CR ++ P + +
Sbjct: 149 SEFEEDESIRLLPKCSHAFHVPCIDTWLRSHSNCPLCRANIVFFSASLPQLPPPVTETPQ 208
Query: 331 SNLRTADSERSSASSVVT--TTRYVRTQPSSQS 361
N +S+R++ + VT T R R + ++Q+
Sbjct: 209 GNESLQESQRANENVSVTQDTERVARDEQATQN 241
>gi|222616595|gb|EEE52727.1| hypothetical protein OsJ_35143 [Oryza sativa Japonica Group]
Length = 165
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 245 GNEWQADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECI 304
G A F G C + L E ++ RG C H FH EC+
Sbjct: 74 GGPRAASAVFLNVGVGDDDNACAGAQCAICLGEFVAGDALR-----RGPGCGHRFHAECV 128
Query: 305 DEWLRLNVKCPRCRCSVFPN 324
+ WLR++ CP CR S P+
Sbjct: 129 ERWLRVSATCPVCRDSPLPS 148
>gi|226503415|ref|NP_001151256.1| protein binding protein [Zea mays]
gi|195645358|gb|ACG42147.1| protein binding protein [Zea mays]
Length = 359
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ + +++R LPC H+FH CID+WL +N CP C+
Sbjct: 312 YEDGVELRELPCNHHFHCSCIDKWLHINATCPLCK 346
>gi|189522117|ref|XP_701217.3| PREDICTED: RING finger protein 165 [Danio rerio]
Length = 347
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ + VR LPC H FH C+D+WL N KCP CR +
Sbjct: 300 SMLEDEEDVRRLPCMHLFHQACVDQWLATNKKCPICRVDI 339
>gi|225438430|ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
gi|296082570|emb|CBI21575.3| unnamed protein product [Vitis vinifera]
Length = 182
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 59/165 (35%), Gaps = 59/165 (35%)
Query: 193 GQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKA-VPTDCSECPICLEEFHVGNEWQAD 251
G +A P AA + + ++Q LPK A V +EC ICL EF G+E
Sbjct: 61 GARASATQP-----AANKGLKKKILQSLPKLTHDATVSGKFAECAICLAEFVEGDE---- 111
Query: 252 VKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRL 310
+R LP C H FH+ C+D WL
Sbjct: 112 --------------------------------------IRVLPQCGHGFHVLCVDTWLSS 133
Query: 311 NVKCPRCR----------CSVFPNLDLSALSNLRTADSERSSASS 345
+ CP CR C FP + +A S+ E+ +A +
Sbjct: 134 HSSCPSCRQILVVTRCRQCGKFPAISGTATSDAELKAREQGTADN 178
>gi|449452226|ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Cucumis sativus]
gi|449532338|ref|XP_004173139.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Cucumis sativus]
Length = 196
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 286 EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLS 328
E+LQV C H FHI+C++ WL N CP CRCSV P S
Sbjct: 122 ELLQVPS--CKHVFHIDCMNHWLISNSTCPLCRCSVIPTTQCS 162
>gi|349603293|gb|AEP99174.1| E3 ubiquitin-protein ligase Arkadia-like protein, partial [Equus
caballus]
Length = 105
Score = 47.4 bits (111), Expect = 0.014, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 58 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 97
>gi|356511433|ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
Length = 206
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 286 EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
E+LQ+ C H FHI CI WL+ N CP CRCS+ P+
Sbjct: 119 ELLQIPY--CKHVFHISCISNWLQSNSTCPLCRCSIIPS 155
>gi|449329011|gb|AGE95286.1| hypothetical protein ECU04_0610 [Encephalitozoon cuniculi]
Length = 246
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++++ LPC H+FH ECIDEWL L CP C+
Sbjct: 199 IKLKFLPCGHHFHQECIDEWLDLKDTCPLCK 229
>gi|197101167|ref|NP_001127501.1| RING finger protein 6 [Pongo abelii]
gi|55730692|emb|CAH92067.1| hypothetical protein [Pongo abelii]
Length = 685
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FHI CID WL N CP CR V
Sbjct: 644 KLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|357472655|ref|XP_003606612.1| hypothetical protein MTR_4g063070 [Medicago truncatula]
gi|355507667|gb|AES88809.1| hypothetical protein MTR_4g063070 [Medicago truncatula]
Length = 396
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 47/112 (41%)
Query: 215 ALIQELPKFRLKAVPTDCS----ECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVH 270
+++Q LP F+ K + +C ICL EF G EW
Sbjct: 312 SMVQALPMFQFKKNEVEQKLSDVDCAICLGEFEEG-EW---------------------- 348
Query: 271 ALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
V+ LP C H+FH+ CID+W + + CP CRC V
Sbjct: 349 -------------------VKHLPICTHSFHVSCIDKWFQSHSNCPLCRCHV 381
>gi|224077684|ref|XP_002305361.1| predicted protein [Populus trichocarpa]
gi|222848325|gb|EEE85872.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 50/135 (37%)
Query: 189 MRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEW 248
+R QD + L A+ R+A++A+ P+ ++ DC+ ICL E +G+E
Sbjct: 45 IRSTNQDGNSNTTARRLPAS-RDAIDAM----PRITVQEGGNDCA---ICLNEIGIGSE- 95
Query: 249 QADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWL 308
+R +PC H FH CI++WL
Sbjct: 96 -----------------------------------------LREMPCKHGFHSGCIEQWL 114
Query: 309 RLNVKCPRCRCSVFP 323
R++ CP CR ++ P
Sbjct: 115 RIHGSCPVCRFTMMP 129
>gi|225454522|ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
gi|297745433|emb|CBI40513.3| unnamed protein product [Vitis vinifera]
Length = 372
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
+R +P C H FH ECIDEWLR+N CP CR S P
Sbjct: 333 LRCIPDCGHCFHAECIDEWLRVNGSCPVCRNSPSP 367
>gi|47077085|dbj|BAD18471.1| unnamed protein product [Homo sapiens]
Length = 994
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 947 SILEEGEDVRRLPCMHLFHQVCVDQWLVTNKKCPICRVDI 986
>gi|326488183|dbj|BAJ89930.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 432
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADS-- 338
S F + ++R LP C+H FH +CI EWL +V CP CR ++ P+ D + +S
Sbjct: 173 SEFEDEDRLRLLPKCSHAFHPDCIGEWLASHVTCPVCRRNLDPSKDAGSDDEASARNSNP 232
Query: 339 ---ERSSASSVVTTTRY 352
E +SASS + R+
Sbjct: 233 PAPEANSASSEIAVLRH 249
>gi|297805668|ref|XP_002870718.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297316554|gb|EFH46977.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 375
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF--------PNLDLSALSNLR 334
F E ++R LP C+H FH+ CID WL+ N CP CR ++F P D +
Sbjct: 149 FSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDE 208
Query: 335 TADSERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGN-TRLPNDTDIALQTVEN 393
+E S ++ +V +G+L PV +G RL N + Q V
Sbjct: 209 EGVTENGSQKTMEIQE------------IVVEKGVL-PVRLGKFKRLDNVGNGQGQDVVA 255
Query: 394 GGVLSATQ 401
GG S++
Sbjct: 256 GGETSSSN 263
>gi|414589110|tpg|DAA39681.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 199
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+++R LPC H+FH CID+WL +N CP C+
Sbjct: 156 VELRELPCNHHFHCSCIDKWLHINATCPLCK 186
>gi|19074138|ref|NP_584744.1| hypothetical protein ECU04_0610 [Encephalitozoon cuniculi GB-M1]
gi|19068780|emb|CAD25248.1| hypothetical protein [Encephalitozoon cuniculi GB-M1]
Length = 246
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++++ LPC H+FH ECIDEWL L CP C+
Sbjct: 199 IKLKFLPCGHHFHQECIDEWLDLKDTCPLCK 229
>gi|356515302|ref|XP_003526340.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Glycine max]
Length = 185
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S +L +R +P C H FH ECIDEWL+++ CP CR S P+
Sbjct: 121 SEYLPKETIRCVPECRHCFHAECIDEWLKMSATCPLCRNSPVPS 164
>gi|195330386|ref|XP_002031885.1| GM26248 [Drosophila sechellia]
gi|194120828|gb|EDW42871.1| GM26248 [Drosophila sechellia]
Length = 872
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 789 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 817
>gi|346703289|emb|CBX25387.1| hypothetical_protein [Oryza brachyantha]
Length = 190
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 267 KLVHALMFLKEHMSTSL--FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ V A K+ +T L FL ++R +PC+H FH CI +W+RLN CP CR
Sbjct: 122 REVSAADAKKDECATCLQDFLADDELRMMPCSHTFHQRCIFDWIRLNCICPLCR 175
>gi|327349848|gb|EGE78705.1| RING finger domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 678
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFP 323
T F++ VR LPC H FH EC+D WL +NV CP CR ++ P
Sbjct: 392 TDDFVKGQDVRLLPCQHKFHPECVDPWL-INVSGTCPLCRINLNP 435
>gi|194903083|ref|XP_001980810.1| GG17363 [Drosophila erecta]
gi|190652513|gb|EDV49768.1| GG17363 [Drosophila erecta]
Length = 887
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WLR N CP CR +
Sbjct: 804 LRVLPCSHEFHAKCVDKWLRSNRTCPICRGNA 835
>gi|449496543|ref|XP_004160161.1| PREDICTED: RING finger protein 150-like [Cucumis sativus]
Length = 208
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRL-NVKCPRCRCSVFPNLDLSALSNLR 334
S F E +VR L C H FH +C+D WL+L CP CR V P+ ++ LR
Sbjct: 80 SEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLR 133
>gi|226528615|ref|NP_001152200.1| ring finger protein [Zea mays]
gi|195653753|gb|ACG46344.1| ring finger protein [Zea mays]
Length = 268
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
F E +VR +P C H FH+ C+D WLR N CP CR
Sbjct: 174 FGEREEVRVMPQCGHGFHVACVDTWLRSNSSCPSCR 209
>gi|414586981|tpg|DAA37552.1| TPA: putative RING zinc finger domain superfamily protein, partial
[Zea mays]
Length = 269
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
VR LP CAH FH+ CID WLR +V CP CR V
Sbjct: 63 VRLLPKCAHAFHVPCIDTWLRAHVNCPVCRSDVL 96
>gi|432961284|ref|XP_004086590.1| PREDICTED: E3 ubiquitin-protein ligase RNF130-like [Oryzias
latipes]
Length = 341
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 21/119 (17%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTT 349
VR LPC H FH C+D WL + CP C+ ++ L + ++ L D S V+
Sbjct: 196 VRILPCKHVFHKVCVDPWLNEHCTCPMCKLNILKALGI--MTTLPCMD------SVVLDV 247
Query: 350 TRYVRTQPS---------SQSYLVRMQGLLSPVHMGNTRLPNDTDIA----LQTVENGG 395
R +QPS S + ++ L P ++ R P D +A L +V +GG
Sbjct: 248 ERLGVSQPSGSQRAPLSDSMQPSISLEPLSPPYYVATPRTPADITVAVTARLASVASGG 306
>gi|147903607|ref|NP_001087624.1| E3 ubiquitin-protein ligase arkadia-C [Xenopus laevis]
gi|82198457|sp|Q66J97.1|R111C_XENLA RecName: Full=E3 ubiquitin-protein ligase arkadia-C; AltName:
Full=RING finger protein 111-C
gi|51703448|gb|AAH81009.1| MGC81562 protein [Xenopus laevis]
Length = 967
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 920 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 959
>gi|357148802|ref|XP_003574899.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like
[Brachypodium distachyon]
Length = 302
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E + LPC H++H ECI++WL+LN CP C V
Sbjct: 257 FEEGESLVALPCKHSYHSECINQWLQLNKVCPMCSAEV 294
>gi|195572254|ref|XP_002104111.1| GD20788 [Drosophila simulans]
gi|194200038|gb|EDX13614.1| GD20788 [Drosophila simulans]
Length = 877
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 794 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 822
>gi|391342339|ref|XP_003745478.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Metaseiulus
occidentalis]
Length = 195
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+VR LPC H FH CID+W R + +CP CR +
Sbjct: 124 EVRRLPCMHLFHAACIDQWFRADKRCPMCRVDI 156
>gi|324507356|gb|ADY43123.1| E3 ubiquitin-protein ligase Arkadia [Ascaris suum]
Length = 579
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 20/32 (62%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH CID WL N KCP CR +
Sbjct: 540 IRVLPCTHYFHTGCIDRWLIYNKKCPMCRVDI 571
>gi|119597961|gb|EAW77555.1| ring finger protein 111, isoform CRA_b [Homo sapiens]
gi|119597966|gb|EAW77560.1| ring finger protein 111, isoform CRA_b [Homo sapiens]
Length = 917
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 870 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 909
>gi|357512355|ref|XP_003626466.1| RING finger-like protein [Medicago truncatula]
gi|355501481|gb|AES82684.1| RING finger-like protein [Medicago truncatula]
Length = 180
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 51/148 (34%), Gaps = 58/148 (39%)
Query: 190 RGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQ 249
+G+ + P T A+ E E +FR +EC +CLEEF N
Sbjct: 69 QGLDESVIKAIPSFIYTTAKSEQEE-------EFR--------AECAVCLEEFQDNN--- 110
Query: 250 ADVKFYPYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWL 308
+R LP C+H FH+ CID WL
Sbjct: 111 ---------------------------------------HIRTLPICSHTFHLNCIDVWL 131
Query: 309 RLNVKCPRCRCSVFPNLDLSALSNLRTA 336
R N CP CR + L+ SN ++
Sbjct: 132 RSNASCPVCRSCLVEEDYLTKCSNASSS 159
>gi|326514802|dbj|BAJ99762.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F + ++R LP C+H FH+ECID WL + CP CRCS+
Sbjct: 155 FADDDRLRLLPKCSHAFHVECIDTWLLSHSTCPLCRCSLL 194
>gi|412992471|emb|CCO18451.1| RING finger protein [Bathycoccus prasinos]
Length = 818
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
++ + LPC+H FH+ C+ WL CP CR SV P
Sbjct: 325 MRAKKLPCSHAFHLHCLRSWLERQQACPTCRASVLP 360
>gi|383174367|gb|AFG70636.1| Pinus taeda anonymous locus 2_7581_01 genomic sequence
Length = 145
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F+E +VR LP C H+FH +CID WL N CP CR S+
Sbjct: 36 FMEGEKVRLLPECCHSFHADCIDAWLLSNASCPSCRHSLL 75
>gi|194746673|ref|XP_001955801.1| GF16054 [Drosophila ananassae]
gi|190628838|gb|EDV44362.1| GF16054 [Drosophila ananassae]
Length = 854
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 768 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 796
>gi|168003471|ref|XP_001754436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694538|gb|EDQ80886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A E I LP + + + +D N +A + S
Sbjct: 224 LYAVADQEGASEEDINNLPTAKFRKISSDGK---------ITANYERALAGVMTFVGASE 274
Query: 263 KPLCKLVHALMFLKEH---MSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
L +F + + S + + +++R LPC+H+FH CI +WLR+N CP C+
Sbjct: 275 N----LTERSLFEDDAECCICLSSYEDGVELRDLPCSHHFHSTCIIKWLRINATCPLCK 329
>gi|431895957|gb|ELK05375.1| E3 ubiquitin-protein ligase Arkadia [Pteropus alecto]
Length = 1100
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 1053 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 1092
>gi|357120728|ref|XP_003562077.1| PREDICTED: RING-H2 finger protein ATL16-like [Brachypodium
distachyon]
Length = 287
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
S F E+ +VR LP C+H FHI+CID WL+ + +CP CR
Sbjct: 138 SEFEEMERVRLLPACSHAFHIDCIDTWLQGSARCPFCR 175
>gi|326505380|dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH EC+D+WL++N CP C+ +
Sbjct: 359 DLRELPCTHFFHKECVDKWLKINALCPLCKAEI 391
>gi|281210989|gb|EFA85155.1| hypothetical protein PPL_02155 [Polysphondylium pallidum PN500]
Length = 548
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
S ++E ++R LPC H++H++CID WL ++ CP C+
Sbjct: 431 SEYIEDDKIRILPCNHHYHLDCIDRWLIIDKSCPFCK 467
>gi|195499458|ref|XP_002096956.1| GE24768 [Drosophila yakuba]
gi|194183057|gb|EDW96668.1| GE24768 [Drosophila yakuba]
Length = 1040
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 957 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 985
>gi|15809022|ref|NP_291082.1| E3 ubiquitin-protein ligase Arkadia [Mus musculus]
gi|81903227|sp|Q99ML9.1|RN111_MOUSE RecName: Full=E3 ubiquitin-protein ligase Arkadia; AltName:
Full=RING finger protein 111
gi|13676779|gb|AAK38272.1|AF330197_1 Arkadia [Mus musculus]
Length = 989
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 942 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 981
>gi|401825978|ref|XP_003887083.1| hypothetical protein EHEL_040510 [Encephalitozoon hellem ATCC
50504]
gi|392998241|gb|AFM98102.1| hypothetical protein EHEL_040510 [Encephalitozoon hellem ATCC
50504]
Length = 246
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++++ LPC H+FH ECIDEWL L CP C+
Sbjct: 199 IKLKLLPCGHHFHQECIDEWLDLKDTCPLCK 229
>gi|361068115|gb|AEW08369.1| Pinus taeda anonymous locus 2_7581_01 genomic sequence
Length = 145
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F+E +VR LP C H+FH +CID WL N CP CR S+
Sbjct: 36 FMEGEKVRLLPECCHSFHADCIDAWLLSNASCPSCRHSLL 75
>gi|428181381|gb|EKX50245.1| hypothetical protein GUITHDRAFT_50560, partial [Guillardia theta
CCMP2712]
Length = 50
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F E +++ LPC H FH CID+WLRL+ +CP C+ SV
Sbjct: 12 FAEGEELKSLPCVHVFHCACIDQWLRLSSECPLCKRSVL 50
>gi|410961149|ref|XP_003987147.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Felis
catus]
Length = 993
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 946 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 985
>gi|335279604|ref|XP_003353384.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sus scrofa]
Length = 1001
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 954 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 993
>gi|194699464|gb|ACF83816.1| unknown [Zea mays]
gi|414885023|tpg|DAA61037.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 180
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++R LPC H FH++C+D+WL++N CP C+
Sbjct: 116 ELRELPCTHFFHVQCVDKWLKINAVCPLCK 145
>gi|168064697|ref|XP_001784296.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664172|gb|EDQ50902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
S + + +++R LPC+H+FH CI +WLR+N CP C+
Sbjct: 246 SSYEDGVELRHLPCSHHFHSTCISKWLRINATCPLCK 282
>gi|357517007|ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
gi|355522814|gb|AET03268.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
Length = 356
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S F + VR LP C H FH+ CID WL+ N CP CR SVF
Sbjct: 147 SEFQDDESVRLLPMCNHVFHLPCIDTWLKSNSSCPLCRSSVF 188
>gi|348555449|ref|XP_003463536.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 1
[Cavia porcellus]
Length = 992
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 945 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 984
>gi|195444736|ref|XP_002070005.1| GK11818 [Drosophila willistoni]
gi|194166090|gb|EDW80991.1| GK11818 [Drosophila willistoni]
Length = 846
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 764 LRVLPCSHEFHAKCVDKWLRSNRTCPICR 792
>gi|413944084|gb|AFW76733.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 421
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S F + ++R LP C+H FH +CI EWL +V CP CRC++ P
Sbjct: 149 SEFEDDEELRLLPSCSHAFHPDCIGEWLAGHVTCPVCRCNLDPE 192
>gi|397515417|ref|XP_003827948.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Pan
paniscus]
Length = 992
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 945 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 984
>gi|395822249|ref|XP_003784434.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Otolemur
garnettii]
Length = 992
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 945 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 984
>gi|303388944|ref|XP_003072705.1| hypothetical protein Eint_040550 [Encephalitozoon intestinalis ATCC
50506]
gi|303301847|gb|ADM11345.1| hypothetical protein Eint_040550 [Encephalitozoon intestinalis ATCC
50506]
Length = 246
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 288 LQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++++ LPC H+FH ECIDEWL L CP C+ ++
Sbjct: 199 IKLKLLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|335279600|ref|XP_001928853.3| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Sus
scrofa]
Length = 992
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 945 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 984
>gi|395455085|ref|NP_001257459.1| E3 ubiquitin-protein ligase Arkadia isoform 4 [Homo sapiens]
gi|308153555|sp|Q6ZNA4.3|RN111_HUMAN RecName: Full=E3 ubiquitin-protein ligase Arkadia; AltName:
Full=RING finger protein 111
gi|119597964|gb|EAW77558.1| ring finger protein 111, isoform CRA_d [Homo sapiens]
Length = 994
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 947 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>gi|426379249|ref|XP_004056314.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Gorilla
gorilla gorilla]
Length = 994
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 947 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>gi|426233210|ref|XP_004010610.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Ovis
aries]
gi|426233212|ref|XP_004010611.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Ovis
aries]
Length = 994
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 947 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>gi|357134414|ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ +R LPC H FH EC+D+WL++N CP C+ +
Sbjct: 353 YVNNDDLRELPCTHFFHKECVDKWLKINALCPLCKAEI 390
>gi|301782363|ref|XP_002926595.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like isoform 2
[Ailuropoda melanoleuca]
gi|281347131|gb|EFB22715.1| hypothetical protein PANDA_016265 [Ailuropoda melanoleuca]
Length = 993
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 946 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 985
>gi|432852760|ref|XP_004067371.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Oryzias latipes]
Length = 1034
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 987 SILEEGEDVRRLPCMHLFHQLCVDQWLLTNKKCPICRVDI 1026
>gi|74000295|ref|XP_535498.2| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Canis
lupus familiaris]
Length = 985
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 938 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>gi|355778079|gb|EHH63115.1| hypothetical protein EGM_16017 [Macaca fascicularis]
Length = 1002
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 955 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 994
>gi|332235796|ref|XP_003267090.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Nomascus
leucogenys]
Length = 994
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 947 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>gi|156121123|ref|NP_001095709.1| E3 ubiquitin-protein ligase Arkadia [Bos taurus]
gi|151554408|gb|AAI47932.1| RNF111 protein [Bos taurus]
gi|296483228|tpg|DAA25343.1| TPA: ring finger protein 111 [Bos taurus]
Length = 994
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 947 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>gi|77552953|gb|ABA95749.1| Kelch motif family protein [Oryza sativa Japonica Group]
Length = 676
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 291 RGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
RG C H FH EC++ WLR++ CP CR S P+
Sbjct: 626 RGPGCGHRFHAECVERWLRVSATCPVCRDSPLPS 659
>gi|383419405|gb|AFH32916.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
Length = 992
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 945 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 984
>gi|348555451|ref|XP_003463537.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 2
[Cavia porcellus]
Length = 984
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 937 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 976
>gi|296087810|emb|CBI35066.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCS 320
VR +P C H FH +CIDEWLR++ CP CR S
Sbjct: 118 VRSIPECNHCFHADCIDEWLRMSATCPICRSS 149
>gi|335279598|ref|XP_003353382.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sus scrofa]
Length = 984
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 937 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 976
>gi|114657301|ref|XP_001172710.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 5 [Pan
troglodytes]
gi|410221202|gb|JAA07820.1| ring finger protein 111 [Pan troglodytes]
gi|410252216|gb|JAA14075.1| ring finger protein 111 [Pan troglodytes]
Length = 994
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 947 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>gi|157819973|ref|NP_001100306.1| E3 ubiquitin-protein ligase Arkadia [Rattus norvegicus]
gi|149028844|gb|EDL84185.1| ring finger protein 111 (predicted) [Rattus norvegicus]
Length = 987
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 940 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 979
>gi|109081307|ref|XP_001098125.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 4 [Macaca
mulatta]
Length = 992
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 945 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 984
>gi|410961151|ref|XP_003987148.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Felis
catus]
Length = 985
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 938 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>gi|355692754|gb|EHH27357.1| hypothetical protein EGK_17534 [Macaca mulatta]
Length = 1001
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 954 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 993
>gi|301782361|ref|XP_002926594.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like isoform 1
[Ailuropoda melanoleuca]
Length = 985
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 938 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>gi|224073019|ref|XP_002303951.1| predicted protein [Populus trichocarpa]
gi|224144358|ref|XP_002336133.1| predicted protein [Populus trichocarpa]
gi|222841383|gb|EEE78930.1| predicted protein [Populus trichocarpa]
gi|222873819|gb|EEF10950.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
S +L +R +P C H FH +CID WL++N CP CR S P+ D + ++
Sbjct: 116 SDYLPKDTIRCIPYCNHCFHADCIDGWLKMNATCPLCRNSPAPSKDSTPVA 166
>gi|109081305|ref|XP_001098434.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 7 [Macaca
mulatta]
Length = 984
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 937 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 976
>gi|47125046|gb|AAH69835.1| Rnf111 protein [Mus musculus]
Length = 981
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 934 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 973
>gi|26339148|dbj|BAC33245.1| unnamed protein product [Mus musculus]
Length = 981
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 934 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 973
>gi|426233214|ref|XP_004010612.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Ovis
aries]
Length = 986
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 939 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>gi|403274539|ref|XP_003929032.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Saimiri boliviensis
boliviensis]
Length = 994
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 947 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>gi|335279602|ref|XP_003353383.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sus scrofa]
Length = 993
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 946 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 985
>gi|149691907|ref|XP_001500171.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 1 [Equus
caballus]
Length = 993
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 946 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 985
>gi|397515415|ref|XP_003827947.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Pan
paniscus]
Length = 984
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 937 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 976
>gi|395822253|ref|XP_003784436.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Otolemur
garnettii]
Length = 1001
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 954 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 993
>gi|387273413|gb|AFJ70201.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
Length = 984
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 937 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 976
>gi|380813986|gb|AFE78867.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
gi|383419407|gb|AFH32917.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
Length = 984
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 937 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 976
>gi|346703737|emb|CBX24405.1| hypothetical_protein [Oryza glaberrima]
Length = 677
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 291 RGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
RG C H FH EC++ WLR++ CP CR S P+
Sbjct: 627 RGPGCGHRFHAECVERWLRVSATCPVCRDSPLPS 660
>gi|242062606|ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A +A I LP++R D G + + P S
Sbjct: 254 LYALAGQEGASDADISVLPRYRFSDPSED-------------GEKGTDEGLMIPILNNSG 300
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ + + + S + + ++ LPC H+FH CI +WLR+N CP C+ ++
Sbjct: 301 VSTSERILLREDAECCVCLSSYEDGAELSALPCNHHFHWTCITKWLRMNATCPLCKYNIL 360
Query: 323 PNLD 326
D
Sbjct: 361 KGSD 364
>gi|26331328|dbj|BAC29394.1| unnamed protein product [Mus musculus]
Length = 981
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 934 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 973
>gi|449442453|ref|XP_004138996.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
gi|449517886|ref|XP_004165975.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
Length = 365
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F E +R LP C+H FH+ CID WL+ + CP CRC++
Sbjct: 150 SEFQENESLRLLPKCSHAFHLACIDTWLKSSSSCPLCRCNI 190
>gi|440910844|gb|ELR60597.1| E3 ubiquitin-protein ligase Arkadia [Bos grunniens mutus]
Length = 1003
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 956 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 995
>gi|432878338|ref|XP_004073308.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 642
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 603 LRVLPCSHEFHGKCVDKWLRANRTCPICRADA 634
>gi|426379247|ref|XP_004056313.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Gorilla
gorilla gorilla]
Length = 986
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 939 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>gi|197100103|ref|NP_001124565.1| E3 ubiquitin-protein ligase Arkadia [Pongo abelii]
gi|75070423|sp|Q5R476.1|RN111_PONAB RecName: Full=E3 ubiquitin-protein ligase Arkadia; AltName:
Full=RING finger protein 111
gi|55733525|emb|CAH93440.1| hypothetical protein [Pongo abelii]
Length = 986
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 939 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>gi|356541117|ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
Length = 399
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F + VR LP C+H FH++CID WLR + CP CR V
Sbjct: 145 FEDDDYVRTLPICSHTFHVDCIDAWLRSHANCPLCRAGV 183
>gi|351696258|gb|EHA99176.1| E3 ubiquitin-protein ligase Arkadia [Heterocephalus glaber]
Length = 997
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 950 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 989
>gi|332235794|ref|XP_003267089.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Nomascus
leucogenys]
Length = 986
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 939 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>gi|37595553|ref|NP_060080.6| E3 ubiquitin-protein ligase Arkadia isoform 2 [Homo sapiens]
gi|119597962|gb|EAW77556.1| ring finger protein 111, isoform CRA_c [Homo sapiens]
gi|119597963|gb|EAW77557.1| ring finger protein 111, isoform CRA_c [Homo sapiens]
Length = 986
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 939 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>gi|15222071|ref|NP_175348.1| RING-H2 finger protein ATL10 [Arabidopsis thaliana]
gi|68565092|sp|P0C034.1|ATL10_ARATH RecName: Full=RING-H2 finger protein ATL10
gi|67633444|gb|AAY78646.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
gi|332194285|gb|AEE32406.1| RING-H2 finger protein ATL10 [Arabidopsis thaliana]
Length = 251
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
S F+ Q+R LP C H FH+ CID+WL+ ++ CP+CR + L + ADS
Sbjct: 140 SDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQ-KILGDFSQADSVT 198
Query: 341 SSASSVVTTT 350
+ + +V T
Sbjct: 199 AEPTEIVIVT 208
>gi|449270595|gb|EMC81254.1| E3 ubiquitin-protein ligase Arkadia [Columba livia]
Length = 1000
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 953 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 992
>gi|395822247|ref|XP_003784433.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Otolemur
garnettii]
Length = 984
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 937 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 976
>gi|393909281|gb|EFO18865.2| ring finger-H2 protein [Loa loa]
Length = 505
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+VR L C+H FHI CID WL N KCP CR V
Sbjct: 462 EVRALRCSHVFHIVCIDRWLVYNKKCPVCRLDV 494
>gi|291402922|ref|XP_002718254.1| PREDICTED: ring finger protein 111 isoform 2 [Oryctolagus
cuniculus]
Length = 992
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 945 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 984
>gi|194206605|ref|XP_001500178.2| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 2 [Equus
caballus]
Length = 985
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 938 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>gi|116789665|gb|ABK25333.1| unknown [Picea sitchensis]
Length = 413
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 68/181 (37%), Gaps = 65/181 (35%)
Query: 214 EALIQELPKFRLKAVP--TDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHA 271
E+ I+ +P ++ K DC++C +CL EFH
Sbjct: 125 ESTIRSIPVYKYKRGDGLVDCTDCSVCLSEFH---------------------------- 156
Query: 272 LMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCS-VFPNLDLSA 329
E VR LP C H FH+ CID WL + CP CR + V P L
Sbjct: 157 --------------EDDSVRLLPKCNHAFHVPCIDTWLNSHSNCPLCRANIVSPAASLPV 202
Query: 330 LSNLRTADSERSSASSVVTT-----TRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDT 384
+ + D E S ++V T + +R +P S S +GN+ N+T
Sbjct: 203 EAAITIHD-EGSDTTAVAQTPNDNHEQNLREEPMSSS-------------LGNSSRANET 248
Query: 385 D 385
+
Sbjct: 249 N 249
>gi|356573020|ref|XP_003554663.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
Length = 375
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F + +R +P C H FH ECIDEWL + CP CR ++ P A++N +
Sbjct: 126 FEDTETLRLIPKCDHVFHPECIDEWLGSHTTCPVCRANLVPTDSEDAIAN--------GN 177
Query: 343 ASSVV----TTTRYVRTQPSSQSYLVRMQGL-LSPVHMGNTRLPNDTDIAL-QTVENGGV 396
A+ VV T TR + Q + Q PV LP ++L +T+
Sbjct: 178 ANGVVPVPETFTRDIEAQNDAVEAAPEQQNAEADPV------LPEPEVVSLDKTLNRNRT 231
Query: 397 LSATQNRIAMGPFS-STGRVLVSP 419
+ NR P S STG LV P
Sbjct: 232 RGSRSNRPRRFPRSHSTGHSLVQP 255
>gi|255541482|ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223548985|gb|EEF50474.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S + + ++R LPC H+FH CID+WL +N CP C+ ++
Sbjct: 324 SAYEDGTELRQLPCQHHFHSTCIDKWLYINATCPLCKLNIL 364
>gi|315075292|ref|NP_001186680.1| E3 ubiquitin-protein ligase Arkadia [Gallus gallus]
Length = 985
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 938 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>gi|449496944|ref|XP_004160270.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
Length = 351
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F E +R LP C+H FH++CID WL+ N CP CR S+
Sbjct: 136 SEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSI 176
>gi|426233216|ref|XP_004010613.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Ovis
aries]
Length = 995
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 948 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 987
>gi|395822251|ref|XP_003784435.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Otolemur
garnettii]
Length = 993
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 946 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 985
>gi|326926532|ref|XP_003209453.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like [Meleagris
gallopavo]
Length = 985
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 938 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>gi|395455083|ref|NP_001257458.1| E3 ubiquitin-protein ligase Arkadia isoform 3 [Homo sapiens]
gi|119597968|gb|EAW77562.1| ring finger protein 111, isoform CRA_g [Homo sapiens]
Length = 985
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 938 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>gi|31874557|emb|CAD98031.1| hypothetical protein [Homo sapiens]
Length = 986
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 939 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>gi|410961147|ref|XP_003987146.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Felis
catus]
Length = 994
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 947 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>gi|356551257|ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
Length = 214
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
C H FH+ECI WL+ N CP CRCS+ P
Sbjct: 127 CKHVFHLECIHHWLQSNSTCPLCRCSIIPT 156
>gi|296089966|emb|CBI39785.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 304 YREKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCK 338
>gi|218202301|gb|EEC84728.1| hypothetical protein OsI_31710 [Oryza sativa Indica Group]
Length = 357
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTAD 337
VR LP C+H FH CID WLR +V CP CR V DL A + A+
Sbjct: 170 VRLLPRCSHPFHAPCIDTWLRAHVNCPLCRSPVVVPSDLPATATEGEAE 218
>gi|114657299|ref|XP_510446.2| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 8 [Pan
troglodytes]
gi|410221200|gb|JAA07819.1| ring finger protein 111 [Pan troglodytes]
gi|410252214|gb|JAA14074.1| ring finger protein 111 [Pan troglodytes]
gi|410306404|gb|JAA31802.1| ring finger protein 111 [Pan troglodytes]
Length = 986
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 939 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>gi|109081311|ref|XP_001098035.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 3 [Macaca
mulatta]
Length = 993
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 946 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 985
>gi|38173842|gb|AAH60862.1| Ring finger protein 111 [Homo sapiens]
Length = 985
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 938 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>gi|395502785|ref|XP_003755756.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sarcophilus
harrisii]
Length = 981
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 934 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 973
>gi|356927749|gb|AET42539.1| hypothetical protein EXVG_00190 [Emiliania huxleyi virus 202]
Length = 271
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 20/36 (55%)
Query: 287 VLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
VL R L C H FH CID WL N CP CR VF
Sbjct: 81 VLGTRTLECNHTFHTHCIDRWLAQNSHCPLCRQPVF 116
>gi|291402920|ref|XP_002718253.1| PREDICTED: ring finger protein 111 isoform 1 [Oryctolagus
cuniculus]
Length = 984
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 937 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 976
>gi|395455081|ref|NP_001257457.1| E3 ubiquitin-protein ligase Arkadia isoform 1 [Homo sapiens]
gi|119597967|gb|EAW77561.1| ring finger protein 111, isoform CRA_f [Homo sapiens]
Length = 995
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 948 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 987
>gi|426379251|ref|XP_004056315.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Gorilla
gorilla gorilla]
Length = 995
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 948 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 987
>gi|47497682|dbj|BAD19749.1| zinc finger (C3HC4-type RING finger) family protein-like [Oryza
sativa Japonica Group]
gi|47848401|dbj|BAD22259.1| zinc finger (C3HC4-type RING finger) family protein-like [Oryza
sativa Japonica Group]
gi|222641748|gb|EEE69880.1| hypothetical protein OsJ_29697 [Oryza sativa Japonica Group]
Length = 357
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTAD 337
VR LP C+H FH CID WLR +V CP CR V DL A + A+
Sbjct: 170 VRLLPRCSHPFHAPCIDTWLRAHVNCPLCRSPVVVPSDLPATATEGEAE 218
>gi|397515419|ref|XP_003827949.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Pan
paniscus]
Length = 993
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 946 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 985
>gi|355716731|gb|AES05704.1| ring finger protein 111 [Mustela putorius furo]
Length = 992
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 946 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 985
>gi|147819085|emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
Length = 343
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 304 YREKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCK 338
>gi|147775862|emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
Length = 419
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E ++R +P C+H FHI+CID WL+ N CP CR S+
Sbjct: 205 FQEEEKLRIIPNCSHIFHIDCIDVWLQSNANCPLCRTSI 243
>gi|449468666|ref|XP_004152042.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
Length = 351
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F E +R LP C+H FH++CID WL+ N CP CR S+
Sbjct: 136 SEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSI 176
>gi|444730977|gb|ELW71346.1| E3 ubiquitin-protein ligase Arkadia [Tupaia chinensis]
Length = 961
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 914 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 953
>gi|7770353|gb|AAF69723.1|AC016041_28 F27J15.2 [Arabidopsis thaliana]
Length = 426
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSER 340
S F+ Q+R LP C H FH+ CID+WL+ ++ CP+CR + L + ADS
Sbjct: 140 SDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQ-KILGDFSQADSVT 198
Query: 341 SSASSVVTTT 350
+ + +V T
Sbjct: 199 AEPTEIVIVT 208
>gi|410913829|ref|XP_003970391.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 578
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 539 LRVLPCSHEFHGKCVDKWLRANRTCPICRADA 570
>gi|296278272|pdb|2KIZ|A Chain A, Solution Structure Of Arkadia Ring-H2 Finger Domain
Length = 69
Score = 47.0 bits (110), Expect = 0.018, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 22 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 61
>gi|148907910|gb|ABR17075.1| unknown [Picea sitchensis]
Length = 466
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
F + Q+R LP C+H FH ECID WL + CP CR S+ P D
Sbjct: 157 FEDDEQLRLLPKCSHAFHPECIDMWLFSHTTCPVCRTSLVPTDD 200
>gi|195606966|gb|ACG25313.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 512
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 48/125 (38%)
Query: 203 LYLTAAQREAVEALIQELP-----KFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPY 257
L L+ +A E+++ LP K D +C ICL E+ G+
Sbjct: 429 LSLSMVSVQAPESVVNSLPCKSYKKLEAPQRSDDMEQCHICLNEYEDGD----------- 477
Query: 258 GFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLR-LNVKCPR 316
Q+R LPC H FH++C+D+WL+ ++ CP
Sbjct: 478 -------------------------------QIRTLPCKHEFHLQCVDKWLKEIHRVCPL 506
Query: 317 CRCSV 321
CR V
Sbjct: 507 CRGDV 511
>gi|226490958|ref|NP_001141061.1| uncharacterized protein LOC100273142 [Zea mays]
gi|194702454|gb|ACF85311.1| unknown [Zea mays]
gi|413939328|gb|AFW73879.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 510
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 48/125 (38%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPT-----DCSECPICLEEFHVGNEWQADVKFYPY 257
L L+ +A E+++ LP K + T D +C ICL E+ G+
Sbjct: 423 LSLSMVSVQAPESVVDSLPCKSYKKLETPQCSDDMEQCHICLTEYEDGD----------- 471
Query: 258 GFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLR-LNVKCPR 316
Q+R LPC H FH++C+D+WL+ ++ CP
Sbjct: 472 -------------------------------QIRTLPCKHEFHLQCVDKWLKEIHRVCPL 500
Query: 317 CRCSV 321
CR V
Sbjct: 501 CRGDV 505
>gi|47215711|emb|CAG04795.1| unnamed protein product [Tetraodon nigroviridis]
Length = 597
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 558 LRVLPCSHEFHGKCVDKWLRANRTCPICRADA 589
>gi|357132888|ref|XP_003568060.1| PREDICTED: RING-H2 finger protein ATL68-like [Brachypodium
distachyon]
Length = 204
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSE 339
C H FH+ C+D WLR + CP CR S P + LS L T SE
Sbjct: 145 CRHAFHLMCLDAWLRRSASCPVCRSSPIPTPAATPLSELATPLSE 189
>gi|126277151|ref|XP_001368112.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 2
[Monodelphis domestica]
Length = 990
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 943 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 982
>gi|114657305|ref|XP_001172697.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Pan
troglodytes]
Length = 995
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 948 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 987
>gi|332235798|ref|XP_003267091.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Nomascus
leucogenys]
Length = 995
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 948 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 987
>gi|356511447|ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein ATL21B-like [Glycine
max]
Length = 582
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCS 320
+R +P C H FH +CIDEWLRLN CP CR S
Sbjct: 349 LRSIPECNHYFHADCIDEWLRLNATCPLCRNS 380
>gi|148694251|gb|EDL26198.1| ring finger 111 [Mus musculus]
Length = 820
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 773 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 812
>gi|126277147|ref|XP_001368075.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 1
[Monodelphis domestica]
Length = 982
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 935 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 974
>gi|356545341|ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
Length = 393
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F + VR LP C+H FH++CID WLR + CP CR V
Sbjct: 141 FEDEDYVRTLPVCSHTFHVDCIDAWLRSHANCPLCRAGV 179
>gi|261332007|emb|CBH15000.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 173
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 285 LEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
L+ +QV LPC H +H CI WL+ ++ CP CR SV P
Sbjct: 125 LDDIQVAQLPCQHRYHANCIRSWLQKSLVCPLCRASVLP 163
>gi|432100488|gb|ELK29105.1| E3 ubiquitin-protein ligase Arkadia [Myotis davidii]
Length = 937
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 890 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 929
>gi|312086763|ref|XP_003145205.1| ring finger-H2 protein [Loa loa]
Length = 484
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+VR L C+H FHI CID WL N KCP CR V
Sbjct: 441 EVRALRCSHVFHIVCIDRWLVYNKKCPVCRLDV 473
>gi|410961153|ref|XP_003987149.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Felis
catus]
Length = 925
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 878 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 917
>gi|357137455|ref|XP_003570316.1| PREDICTED: uncharacterized protein LOC100833892 isoform 1
[Brachypodium distachyon]
Length = 518
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 48/125 (38%)
Query: 203 LYLTAAQREAVEALIQELP-----KFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPY 257
L L+ +A E+++ LP K D +C ICL E+ G+
Sbjct: 430 LSLSMVSVQAPESVVNSLPCKSYKKLETAQCSADLEQCHICLTEYEDGD----------- 478
Query: 258 GFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLR-LNVKCPR 316
Q+R LPC H FH++C+D+WL+ ++ CP
Sbjct: 479 -------------------------------QIRSLPCKHEFHLQCVDKWLKEIHRVCPL 507
Query: 317 CRCSV 321
CR V
Sbjct: 508 CRGDV 512
>gi|67599618|ref|XP_666300.1| zinc-finger protein [Cryptosporidium hominis TU502]
gi|54657271|gb|EAL36072.1| zinc-finger protein [Cryptosporidium hominis]
Length = 208
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSE 339
VR LPC H +H CIDEW+++ CP C N++L+++ N D E
Sbjct: 124 VRKLPCRHIYHFNCIDEWVKIKSNCPLC------NINLTSIYNQNIRDRE 167
>gi|242795203|ref|XP_002482533.1| RING finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218719121|gb|EED18541.1| RING finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 529
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFP 323
T F++ VR LPC H FH ECID WL +NV CP CR + P
Sbjct: 374 TDDFVKGQDVRLLPCNHQFHPECIDPWL-INVSGTCPLCRIDLNP 417
>gi|428172306|gb|EKX41216.1| hypothetical protein GUITHDRAFT_142140 [Guillardia theta CCMP2712]
Length = 126
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
Q R LPC H FH +CID WLR N CP C+ F
Sbjct: 91 QARILPCLHQFHKDCIDRWLRDNSTCPVCKMDPF 124
>gi|398408569|ref|XP_003855750.1| hypothetical protein MYCGRDRAFT_117727 [Zymoseptoria tritici
IPO323]
gi|339475634|gb|EGP90726.1| hypothetical protein MYCGRDRAFT_117727 [Zymoseptoria tritici
IPO323]
Length = 551
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 291 RGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSN 332
R LPC H FH CID WL LNV CP CR + P D+ A N
Sbjct: 368 RVLPCNHRFHPACIDPWL-LNVSGTCPLCRIDLRPQSDIDADDN 410
>gi|326498937|dbj|BAK02454.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV-FPNLDLSALSNLRTADSE 339
+ R LP C H FH+EC+D WLR CP CR P D A S+ A +E
Sbjct: 122 EARELPNCGHLFHLECVDAWLRTRTTCPLCRAGAEVPGDDEKAQSSSAVAATE 174
>gi|218190405|gb|EEC72832.1| hypothetical protein OsI_06560 [Oryza sativa Indica Group]
Length = 217
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
VR +P C H FH+ECID WL + CP CRC + P +++A
Sbjct: 157 VREMPACKHLFHVECIDMWLHSHRTCPMCRCDLSPPREVAA 197
>gi|405950010|gb|EKC18019.1| hypothetical protein CGI_10016779 [Crassostrea gigas]
Length = 671
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRT 335
LF ++R LPC+H FH +C+D WL N CP C+ ++ + L N+++
Sbjct: 372 ELFNRKQKLRVLPCSHEFHTKCVDPWLLNNRTCPLCKLNIVVGGLMGNLGNMQS 425
>gi|403290096|ref|XP_003936168.1| PREDICTED: RING finger protein 44 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 429
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 384 FEVRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADA 421
>gi|359494331|ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
Length = 312
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC+H FH++C+D+WLR+ CP C+
Sbjct: 273 YREKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCK 307
>gi|224141203|ref|XP_002323964.1| predicted protein [Populus trichocarpa]
gi|222866966|gb|EEF04097.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD--LSALSNLRTADS 338
F + +R LP C+H FHI CID WLR + CP CR + N D S+ +NL S
Sbjct: 46 FQDDETLRLLPKCSHAFHIPCIDTWLRSHTNCPLCRAPIVTNTDEATSSQANLGNTSS 103
>gi|19173466|ref|NP_597269.1| hypothetical protein ECU08_1410 [Encephalitozoon cuniculi GB-M1]
gi|19171055|emb|CAD26445.1| hypothetical protein [Encephalitozoon cuniculi GB-M1]
Length = 252
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 19/29 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
VR L C H FH EC+D WLR N CP CR
Sbjct: 204 VRSLDCGHAFHKECVDRWLRKNFVCPICR 232
>gi|255636961|gb|ACU18813.1| unknown [Glycine max]
Length = 385
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 23/157 (14%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNL----------DLSAL 330
S F E +R LP C H FH+ CID WLR + CP CR + +L D S+L
Sbjct: 172 SEFQEDENLRLLPKCHHAFHLPCIDTWLRSHTNCPMCRAPIVADLATARMESSFVDSSSL 231
Query: 331 SNLRTADSERSSASSVVTTTRYVRTQPSSQSYL-VRMQGLLSPVHMGNTRLPNDT----- 384
N E S+ S + R + + VR+ +PV + LP +
Sbjct: 232 ENSHMEVLENSAPDSELMNNRAEEEEGQLEVEDGVRVCETETPVEDVASTLPRSSVFLDS 291
Query: 385 ------DIALQTVENGGVLSATQNRIAMGPFSSTGRV 415
++AL TVE G + P +S G +
Sbjct: 292 FSFANFNLALATVEFNGNSKRVLGGVDDDPTASKGVI 328
>gi|116310081|emb|CAH67102.1| H0818E04.19 [Oryza sativa Indica Group]
Length = 514
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
VR LP C H FH+ CID WLR +V CP CR V
Sbjct: 314 VRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVL 347
>gi|449328834|gb|AGE95110.1| hypothetical protein ECU08_1410 [Encephalitozoon cuniculi]
Length = 252
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 19/29 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
VR L C H FH EC+D WLR N CP CR
Sbjct: 204 VRSLDCGHAFHKECVDRWLRKNFVCPICR 232
>gi|74205977|dbj|BAE23252.1| unnamed protein product [Mus musculus]
Length = 876
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 829 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 868
>gi|356521151|ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 352
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 27/127 (21%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTD-------CSECPICLEEFHVGNEWQADVKFY 255
LY A Q A EA + LPK+R + + + S PI ++ NE
Sbjct: 240 LYAVAGQEGASEADLSMLPKYRFRILSDEDKPSGGAGSMVPIETSSAYLANE----RTLL 295
Query: 256 PYGFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCP 315
P LC + + ++ LPC H+FH CI +WL++N CP
Sbjct: 296 PEDAECCICLCS----------------YEDGAELHALPCNHHFHSSCIVKWLKMNATCP 339
Query: 316 RCRCSVF 322
C+ ++
Sbjct: 340 LCKYNIL 346
>gi|356503859|ref|XP_003520719.1| PREDICTED: RING-H2 finger protein ATL70-like [Glycine max]
Length = 171
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
+R LP C H FH++CID WLRL+ CP CR S P
Sbjct: 118 LRMLPDCGHQFHLKCIDPWLRLHPTCPVCRTSPIP 152
>gi|354465240|ref|XP_003495088.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1
[Cricetulus griseus]
gi|344243798|gb|EGV99901.1| E3 ubiquitin-protein ligase Arkadia [Cricetulus griseus]
Length = 990
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 943 SVLEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 982
>gi|326488711|dbj|BAJ97967.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV-FPNLDLSALSNLRTADSE 339
+ R LP C H FH+EC+D WLR CP CR P D A S+ A +E
Sbjct: 122 EARELPNCGHLFHLECVDAWLRTRTTCPLCRAGAEVPGDDEKAQSSSAVAATE 174
>gi|224062385|ref|XP_002196878.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Taeniopygia
guttata]
Length = 985
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 938 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 977
>gi|13752369|gb|AAK38636.1|AF329846_1 ring finger protein, partial [Gallus gallus]
Length = 879
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 832 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 871
>gi|357137457|ref|XP_003570317.1| PREDICTED: uncharacterized protein LOC100833892 isoform 2
[Brachypodium distachyon]
Length = 517
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 48/125 (38%)
Query: 203 LYLTAAQREAVEALIQELP-----KFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPY 257
L L+ +A E+++ LP K D +C ICL E+ G+
Sbjct: 429 LSLSMVSVQAPESVVNSLPCKSYKKLETAQCSADLEQCHICLTEYEDGD----------- 477
Query: 258 GFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLR-LNVKCPR 316
Q+R LPC H FH++C+D+WL+ ++ CP
Sbjct: 478 -------------------------------QIRSLPCKHEFHLQCVDKWLKEIHRVCPL 506
Query: 317 CRCSV 321
CR V
Sbjct: 507 CRGDV 511
>gi|71746562|ref|XP_822336.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832004|gb|EAN77508.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 173
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 285 LEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
L+ +QV LPC H +H CI WL+ ++ CP CR SV P
Sbjct: 125 LDDIQVAQLPCQHRYHANCIRSWLQKSLVCPLCRASVLP 163
>gi|47230399|emb|CAF99592.1| unnamed protein product [Tetraodon nigroviridis]
Length = 469
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 422 SILEEGEDVRRLPCMHLFHQLCVDQWLVTNKKCPICRVDI 461
>gi|357137459|ref|XP_003570318.1| PREDICTED: uncharacterized protein LOC100833892 isoform 3
[Brachypodium distachyon]
Length = 510
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 48/125 (38%)
Query: 203 LYLTAAQREAVEALIQELP-----KFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPY 257
L L+ +A E+++ LP K D +C ICL E+ G+
Sbjct: 422 LSLSMVSVQAPESVVNSLPCKSYKKLETAQCSADLEQCHICLTEYEDGD----------- 470
Query: 258 GFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLR-LNVKCPR 316
Q+R LPC H FH++C+D+WL+ ++ CP
Sbjct: 471 -------------------------------QIRSLPCKHEFHLQCVDKWLKEIHRVCPL 499
Query: 317 CRCSV 321
CR V
Sbjct: 500 CRGDV 504
>gi|348509737|ref|XP_003442403.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Oreochromis
niloticus]
Length = 977
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALS 331
S+ E VR LPC H FH C+D+WL N KCP CR + LSA S
Sbjct: 930 SILEEGEDVRRLPCMHLFHQLCVDQWLLTNKKCPICRVDI--EAQLSAES 977
>gi|225464029|ref|XP_002266804.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Vitis
vinifera]
Length = 174
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCS 320
VR +P C H FH +CIDEWLR++ CP CR S
Sbjct: 118 VRSIPECNHCFHADCIDEWLRMSATCPICRSS 149
>gi|396081943|gb|AFN83557.1| hypothetical protein EROM_081410 [Encephalitozoon romaleae SJ-2008]
Length = 249
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 20/29 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
VR L C H FH ECID+WLR N CP CR
Sbjct: 201 VRNLGCGHVFHRECIDKWLRKNFVCPVCR 229
>gi|226533202|ref|NP_001147045.1| protein binding protein [Zea mays]
gi|195606842|gb|ACG25251.1| protein binding protein [Zea mays]
Length = 280
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 276 KEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ ++ S+ LE + V R LPC H FH+ CID WLR CP C+ V
Sbjct: 213 QDELTCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQV 262
>gi|146332505|gb|ABQ22758.1| RING finger protein 38-like protein [Callithrix jacchus]
Length = 44
Score = 47.0 bits (110), Expect = 0.020, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 5 LRVLPCNHEFHAKCVDKWLKANRTCPICR 33
>gi|354465242|ref|XP_003495089.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2
[Cricetulus griseus]
Length = 982
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 935 SVLEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 974
>gi|449670895|ref|XP_004207377.1| PREDICTED: uncharacterized protein LOC101237952 [Hydra
magnipapillata]
Length = 300
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
V+ LPC H FH +C+D WL ++ CP CRC++
Sbjct: 260 VKKLPCCHVFHSQCVDPWLEMHDSCPICRCNL 291
>gi|297792677|ref|XP_002864223.1| hypothetical protein ARALYDRAFT_918381 [Arabidopsis lyrata subsp.
lyrata]
gi|297310058|gb|EFH40482.1| hypothetical protein ARALYDRAFT_918381 [Arabidopsis lyrata subsp.
lyrata]
Length = 166
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 294 PCAHNFHIECIDEWLRLNVKCPRCRCS---VFPNLDLSA 329
PC H FH +CIDEWL+LN CP CR S +FP + ++
Sbjct: 128 PCQHCFHADCIDEWLKLNGTCPVCRNSPEQIFPPENFNS 166
>gi|410913211|ref|XP_003970082.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Takifugu
rubripes]
Length = 1006
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 959 SILEEGEDVRRLPCMHLFHQLCVDQWLVTNKKCPICRVDI 998
>gi|359473435|ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
Length = 393
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F + ++R LP C+H FHIECID WL N CP CR ++F
Sbjct: 153 FSQEDKLRLLPMCSHAFHIECIDTWLLSNSTCPLCRGTLF 192
>gi|297806725|ref|XP_002871246.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317083|gb|EFH47505.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 159
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL 333
VR +P C H FH +C+DEWLR + CP CR S P+ + LS+L
Sbjct: 107 VRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDL 151
>gi|189521454|ref|XP_001922708.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like [Danio rerio]
Length = 988
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 941 SILEEGEDVRRLPCMHLFHQLCVDQWLLTNKKCPICRVDI 980
>gi|341946951|gb|AEL13393.1| ring finger protein [Zea mays]
Length = 280
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 276 KEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ ++ S+ LE + V R LPC H FH+ CID WLR CP C+ V
Sbjct: 213 QDELTCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQV 262
>gi|346703276|emb|CBX25374.1| hypothetical_protein [Oryza brachyantha]
Length = 143
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
F E +++ PC+H FH CI EWLRL+ CP CR
Sbjct: 92 FEEGERLKRTPCSHGFHASCISEWLRLSRLCPHCR 126
>gi|302837650|ref|XP_002950384.1| hypothetical protein VOLCADRAFT_60307 [Volvox carteri f.
nagariensis]
gi|300264389|gb|EFJ48585.1| hypothetical protein VOLCADRAFT_60307 [Volvox carteri f.
nagariensis]
Length = 130
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS 342
F+ ++R LP C H FH CID WL + CP CR V P + + L A R S
Sbjct: 59 FVTGEELRLLPGCGHVFHRCCIDRWLSTSATCPNCRTIVMPAWVVEMVLELAAARQRRGS 118
Query: 343 ASSVV 347
S V
Sbjct: 119 GSPAV 123
>gi|242075994|ref|XP_002447933.1| hypothetical protein SORBIDRAFT_06g018375 [Sorghum bicolor]
gi|241939116|gb|EES12261.1| hypothetical protein SORBIDRAFT_06g018375 [Sorghum bicolor]
Length = 420
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F + VR LP CAH FH+ CID WLR +V CP CR V
Sbjct: 210 FQDGELVRLLPKCAHAFHVPCIDTWLRAHVNCPICRSDV 248
>gi|156550430|ref|XP_001600973.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Nasonia
vitripennis]
Length = 148
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 37/107 (34%), Gaps = 42/107 (39%)
Query: 212 AVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHA 271
A + +++ LP+ K +CP+C+ +F GN
Sbjct: 48 ASKDVVKNLPEIEYKDKLDKREQCPVCIRDFETGN------------------------- 82
Query: 272 LMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ LPC HNFH ECI+ WL CP CR
Sbjct: 83 -----------------TAKALPCEHNFHKECIEPWLEKTNSCPLCR 112
>gi|402217231|gb|EJT97312.1| hypothetical protein DACRYDRAFT_25112 [Dacryopinax sp. DJM-731 SS1]
Length = 382
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 275 LKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLR-LNVKCPRCRCSVF 322
L E + E ++R LPC H FH ECID WLR ++ +CP C+ VF
Sbjct: 326 LGEELPRPTPTEPEELRLLPCEHVFHKECIDPWLRDVSGRCPTCQRPVF 374
>gi|115471969|ref|NP_001059583.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|33146524|dbj|BAC79657.1| putative RES protein [Oryza sativa Japonica Group]
gi|113611119|dbj|BAF21497.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|125600141|gb|EAZ39717.1| hypothetical protein OsJ_24155 [Oryza sativa Japonica Group]
gi|215695316|dbj|BAG90507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++R LPC H+FH CID+WL +N CP C+
Sbjct: 319 ELRELPCNHHFHCTCIDKWLHINATCPLCK 348
>gi|384246813|gb|EIE20302.1| hypothetical protein COCSUDRAFT_58012 [Coccomyxa subellipsoidea
C-169]
Length = 124
Score = 46.6 bits (109), Expect = 0.021, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 283 LFLEVLQVRGLPCAHNFHIECIDEWLRLN---VKCPRCRCSVFP 323
++ E +V LPC H+FH +CI+ WLRL CP C+ VFP
Sbjct: 78 VYGEGARVTTLPCKHSFHADCIEPWLRLQGTAATCPLCKRIVFP 121
>gi|300708549|ref|XP_002996451.1| hypothetical protein NCER_100447 [Nosema ceranae BRL01]
gi|239605755|gb|EEQ82780.1| hypothetical protein NCER_100447 [Nosema ceranae BRL01]
Length = 246
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 48/104 (46%)
Query: 221 PKFRL------KAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHALMF 274
PKFR+ +P + C IC E++ GNE
Sbjct: 168 PKFRIIKFNKPDDLPDETVTCTICFEQYEPGNE--------------------------- 200
Query: 275 LKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++ LPC H+FH +C+DEWL L CP C+
Sbjct: 201 ---------------IKFLPCTHHFHCDCVDEWLALKESCPLCK 229
>gi|255585760|ref|XP_002533560.1| RING-H2 finger protein ATL5H precursor, putative [Ricinus communis]
gi|223526560|gb|EEF28817.1| RING-H2 finger protein ATL5H precursor, putative [Ricinus communis]
Length = 267
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV--FPNLDLSALSNLR---- 334
S F + +R LP C H FH ECIDEWL V CP CR ++ P + S +S +
Sbjct: 120 SEFEDDETLRLLPKCNHVFHPECIDEWLTCRVTCPVCRANLQEAPTAESSTVSEVARQEV 179
Query: 335 --TADSERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPND 383
D E+S S V ++ R+ + S L V RLP +
Sbjct: 180 TINVDEEQSGESPVSRKNQFPRSHSTGHS-------LAENVERCTLRLPEE 223
>gi|219886001|gb|ACL53375.1| unknown [Zea mays]
gi|413956192|gb|AFW88841.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 280
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 276 KEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ ++ S+ LE + V R LPC H FH+ CID WLR CP C+ V
Sbjct: 213 QDELTCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQV 262
>gi|357521319|ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 336
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSH 262
LY A Q A E+ + LPK+R + + + P + N A+ + +
Sbjct: 226 LYAVAGQEGASESDLSTLPKYRFQVPGNEETPSPKGGSMVPIENSSGANERV----LSPE 281
Query: 263 KPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
C + S + + ++ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 282 DAECCIC-----------ISPYEDEAELHALPCNHHFHSTCIVKWLKMNATCPLCKFNIL 330
>gi|358414167|ref|XP_003582765.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 2 [Bos
taurus]
Length = 636
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 589 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 628
>gi|218199557|gb|EEC81984.1| hypothetical protein OsI_25906 [Oryza sativa Indica Group]
Length = 361
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++R LPC H+FH CID+WL +N CP C+
Sbjct: 319 ELRELPCNHHFHCTCIDKWLHINATCPLCK 348
>gi|426229341|ref|XP_004008749.1| PREDICTED: RING finger protein 44 [Ovis aries]
Length = 432
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|359477789|ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
Length = 359
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E ++R +P C+H FHI+CID WL+ N CP CR S+
Sbjct: 145 FQEEEKLRIIPNCSHIFHIDCIDVWLQSNANCPLCRTSI 183
>gi|356560276|ref|XP_003548419.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
max]
Length = 378
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+R +P C H FH +CIDEWLR+N CP CR S P+
Sbjct: 334 IRLIPECKHCFHADCIDEWLRINTTCPVCRNSPSPS 369
>gi|242064638|ref|XP_002453608.1| hypothetical protein SORBIDRAFT_04g008950 [Sorghum bicolor]
gi|241933439|gb|EES06584.1| hypothetical protein SORBIDRAFT_04g008950 [Sorghum bicolor]
Length = 172
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDL 327
V+ LP C H FH +C+D+WL+ N CP CRC+VF L +
Sbjct: 131 VKRLPVCLHVFHQQCVDKWLKNNSTCPVCRCNVFAPLPM 169
>gi|198434521|ref|XP_002131882.1| PREDICTED: similar to Ring finger protein 44 [Ciona intestinalis]
Length = 765
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D WLR N CP CR
Sbjct: 712 LRVLPCKHEFHAKCVDRWLRSNRTCPICR 740
>gi|166796538|gb|AAI59084.1| LOC100145171 protein [Xenopus (Silurana) tropicalis]
Length = 303
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTAD-----SERSSAS 344
VR L C H FH CID WL + CP C+C + +L ++ T+ S S
Sbjct: 171 VRILTCNHFFHKNCIDPWLLEHRTCPMCKCDILKSLGIAEDEEETTSAAIPSVSSELQRS 230
Query: 345 SVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMG 376
+V T R++ +S Y ++G PV G
Sbjct: 231 TVQTIEEENRSETASSGY-ASVRGGDEPVDEG 261
>gi|147811851|emb|CAN61651.1| hypothetical protein VITISV_014602 [Vitis vinifera]
Length = 326
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F + ++R LP C+H FHIECID WL N CP CR ++F
Sbjct: 108 FSQEDKLRLLPMCSHAFHIECIDTWLLSNSTCPLCRGTLF 147
>gi|414881039|tpg|DAA58170.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 485
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+R LPC H FH ECID WL + + CP C+ +VF
Sbjct: 451 LRHLPCLHKFHKECIDRWLGMKIWCPICKLNVF 483
>gi|242035231|ref|XP_002465010.1| hypothetical protein SORBIDRAFT_01g030420 [Sorghum bicolor]
gi|241918864|gb|EER92008.1| hypothetical protein SORBIDRAFT_01g030420 [Sorghum bicolor]
Length = 272
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
F E +VR +P C H FH+ C+D WLR N CP CR
Sbjct: 186 FGEREEVRVMPQCGHGFHVACVDTWLRSNSSCPSCR 221
>gi|224072190|ref|XP_002335928.1| predicted protein [Populus trichocarpa]
gi|222836416|gb|EEE74823.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 46.6 bits (109), Expect = 0.022, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNV-KCPRCRCSVFPN 324
S F E VR L C H FH +C+D+WL+ ++ CP CR V P+
Sbjct: 28 SKFSEGESVRKLNCKHTFHKDCLDKWLQQSLATCPLCRAKVLPD 71
>gi|354471971|ref|XP_003498214.1| PREDICTED: RING finger protein 44 isoform 2 [Cricetulus griseus]
Length = 433
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 388 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 425
>gi|348542469|ref|XP_003458707.1| PREDICTED: E3 ubiquitin-protein ligase RNF130-like [Oreochromis
niloticus]
Length = 383
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 285 LEVLQ----VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA---LSNLRTAD 337
+EV Q VR LPC H FH C+D WL+ + CP C+ ++ L ++ + D
Sbjct: 237 IEVYQLNDVVRILPCKHVFHKACVDPWLKEHCTCPMCKLNILKALGITTSVPCVDSVVLD 296
Query: 338 SERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNT-RLPNDTDIALQTVENGG 395
+R AS R + + + S + LSP H T R P D IA V +GG
Sbjct: 297 VDRLGASQAPGNQRSLLSDSNQPSISLEP---LSPTHSEATPRTPADITIA---VTSGG 349
>gi|354471969|ref|XP_003498213.1| PREDICTED: RING finger protein 44 isoform 1 [Cricetulus griseus]
Length = 432
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 387 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 424
>gi|294911925|ref|XP_002778099.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239886220|gb|EER09894.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 313
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+R LPC H +H CIDEWL+ + CP C+ S+
Sbjct: 252 LRTLPCMHRYHAACIDEWLKSSPTCPVCKTSIL 284
>gi|224071770|ref|XP_002303571.1| predicted protein [Populus trichocarpa]
gi|222841003|gb|EEE78550.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
S + + ++R LPC H+FH C+D+WL +N CP C+
Sbjct: 130 SAYEDGAELRQLPCGHHFHCTCVDKWLYINATCPLCK 166
>gi|45382265|ref|NP_990159.1| E3 ubiquitin-protein ligase RLIM [Gallus gallus]
gi|4959046|gb|AAD34210.1|AF069993_1 LIM domain interacting RING finger protein [Gallus gallus]
Length = 593
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+ E ++R LPC+H +H+ CI WL N CP CR +V
Sbjct: 546 YTEGNKLRKLPCSHEYHVHCIARWLSENSTCPICRRAVL 584
>gi|414880832|tpg|DAA57963.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 429
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E +VR LPC H FH++C+D WLR+ CP C+
Sbjct: 391 YGEKEEVRQLPCTHVFHLKCVDRWLRIISSCPLCK 425
>gi|224005124|ref|XP_002296213.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586245|gb|ACI64930.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2172
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVV 347
++R LPC H H C+D WL N CP CR S+ +D + LRT S S+ SS +
Sbjct: 1974 ELRVLPCNHYMHKVCVDAWLGNNPSCPSCRYSLSELVDDRPMLQLRTLRSRISTQSSAL 2032
>gi|358414165|ref|XP_003582764.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 1 [Bos
taurus]
Length = 628
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 581 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 620
>gi|356533787|ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
Length = 367
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E ++R +P C+H FHI+CID WL+ N CP CR S+
Sbjct: 144 FQEDEKLRVIPNCSHVFHIDCIDVWLQSNANCPLCRTSI 182
>gi|326510975|dbj|BAJ91835.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326513510|dbj|BAJ87774.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F + Q+R LP C+H FH +CI EWL +V CP CRCS+
Sbjct: 154 SEFEDGDQLRLLPKCSHAFHPDCIGEWLAGHVTCPVCRCSL 194
>gi|344293339|ref|XP_003418381.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Loxodonta africana]
Length = 984
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 937 SVLEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 976
>gi|47226627|emb|CAG07786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 393
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDL 327
+R LPC H +H EC+D WL L CP C+ S+F L L
Sbjct: 323 LRVLPCLHEYHRECVDPWLLLQHTCPLCKRSIFSALSL 360
>gi|268569244|ref|XP_002640470.1| Hypothetical protein CBG13603 [Caenorhabditis briggsae]
Length = 502
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH ECI +WL +N KCP CR
Sbjct: 450 IRKLPCNHLFHPECIYKWLDINKKCPMCR 478
>gi|15240681|ref|NP_196321.1| putative RING-H2 finger protein ATL69 [Arabidopsis thaliana]
gi|68565291|sp|Q9FL42.1|ATL69_ARATH RecName: Full=Putative RING-H2 finger protein ATL69
gi|9759560|dbj|BAB11162.1| C3HC4-type RING zinc finger protein-like [Arabidopsis thaliana]
gi|332003718|gb|AED91101.1| putative RING-H2 finger protein ATL69 [Arabidopsis thaliana]
Length = 159
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNL 333
VR +P C H FH +C+DEWLR + CP CR S P+ + LS+L
Sbjct: 107 VRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDL 151
>gi|388495346|gb|AFK35739.1| unknown [Lotus japonicus]
Length = 249
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
VR LPC H FH CID+WLR CP C+
Sbjct: 200 VRNLPCLHQFHANCIDQWLRQQGTCPVCK 228
>gi|147860397|emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]
Length = 1090
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F E ++R LP C+H FHI CID WL N CP CR ++F
Sbjct: 869 FSEKDKLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLF 908
>gi|297809223|ref|XP_002872495.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318332|gb|EFH48754.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 237
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVF--PNLDLS 328
C H FH+ECID WL + CP CR S+ P+LDLS
Sbjct: 130 CGHTFHMECIDRWLTSHTTCPLCRLSLIPKPSLDLS 165
>gi|297493301|ref|XP_002700289.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|296470587|tpg|DAA12702.1| TPA: ring finger protein, LIM domain interacting-like [Bos taurus]
Length = 129
Score = 46.6 bits (109), Expect = 0.023, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H +H +CID+WL + CP CR V
Sbjct: 88 LRILPCSHEYHYQCIDQWLEEHPNCPICRAPV 119
>gi|301120268|ref|XP_002907861.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102892|gb|EEY60944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 744
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+++ LPC H++H +C+D WL LN CP C+ SV
Sbjct: 707 EIKSLPCFHSYHSDCVDSWLSLNKVCPVCQFSV 739
>gi|225637509|ref|NP_001139497.1| RING finger protein 44 isoform 1 [Mus musculus]
Length = 432
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 387 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 424
>gi|403290098|ref|XP_003936169.1| PREDICTED: RING finger protein 44 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 348
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 303 FEVRQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 337
>gi|383129996|gb|AFG45715.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
Length = 114
Score = 46.6 bits (109), Expect = 0.023, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+VR LP C H FH+EC+D+WL + CP CR S+
Sbjct: 1 KVRVLPNCNHGFHMECVDKWLASHTSCPMCRHSL 34
>gi|383129984|gb|AFG45709.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
gi|383129994|gb|AFG45714.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
Length = 114
Score = 46.6 bits (109), Expect = 0.023, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+VR LP C H FH+EC+D+WL + CP CR S+
Sbjct: 1 KVRVLPNCNHGFHMECVDKWLASHTSCPMCRHSL 34
>gi|356531427|ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
max]
Length = 370
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S F + VR LP C+H FH+ CID WL+ + CP CR S+F
Sbjct: 150 SEFRDDESVRLLPKCSHAFHLPCIDTWLKSHSSCPLCRASIF 191
>gi|356496378|ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
max]
Length = 364
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
S F + VR LP C+H FH+ CID WL+ + CP CR S+F
Sbjct: 147 SEFQDDESVRLLPKCSHAFHLPCIDTWLKSHSSCPLCRASIF 188
>gi|410949126|ref|XP_003981275.1| PREDICTED: RING finger protein 44 isoform 1 [Felis catus]
Length = 431
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 392 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 423
>gi|383129992|gb|AFG45713.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
Length = 114
Score = 46.6 bits (109), Expect = 0.023, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+VR LP C H FH+EC+D+WL + CP CR S+
Sbjct: 1 KVRVLPNCNHGFHMECVDKWLASHTSCPMCRHSL 34
>gi|383129980|gb|AFG45707.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
gi|383129982|gb|AFG45708.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
gi|383129986|gb|AFG45710.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
gi|383129988|gb|AFG45711.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
gi|383129990|gb|AFG45712.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
gi|383129998|gb|AFG45716.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
gi|383130000|gb|AFG45717.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
gi|383130002|gb|AFG45718.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
gi|383130004|gb|AFG45719.1| Pinus taeda anonymous locus 2_8497_02 genomic sequence
Length = 115
Score = 46.6 bits (109), Expect = 0.023, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+VR LP C H FH+EC+D+WL + CP CR S+
Sbjct: 1 KVRVLPNCNHGFHMECVDKWLASHTSCPMCRHSL 34
>gi|357140047|ref|XP_003571584.1| PREDICTED: RING-H2 finger protein ATL32-like [Brachypodium
distachyon]
Length = 217
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
VR LP C H FH+ECID WL + CP CRC V P
Sbjct: 154 VRQLPACGHVFHVECIDMWLHSHRTCPMCRCVVSP 188
>gi|343425137|emb|CBQ68674.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 595
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 31/120 (25%)
Query: 206 TAAQREAVEALIQELPKFRLKAVP----TDCSECPICLEEFHVGNEWQADVKFYPYGFTS 261
+ A A E +I++L +F L P +CP C ++F D +
Sbjct: 351 STAPPPATEDVIEKLERFTLNDKPRIEKAKNQDCPTCKDDFLPSPTEAGDAQKD------ 404
Query: 262 HKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+E L +PC H FH++C+ WLRL+ CP CR S+
Sbjct: 405 --------------EEQQQEDLI-------SMPCGHIFHVDCLVPWLRLHGTCPVCRISI 443
>gi|12322389|gb|AAG51221.1|AC051630_18 unknown protein; 73879-71181 [Arabidopsis thaliana]
Length = 508
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 295 CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTTTRYVR 354
C H FH++CID WL + CP CR ++ P+ R+ S+ S+V+ V
Sbjct: 119 CKHTFHMDCIDLWLTSHTTCPLCRLALIPS---------RSRQSQDDPVPSLVSPDEEVS 169
Query: 355 TQPSSQSY---LVRMQGLLSPV-HMGNTRLP 381
+QP S+ +V Q PV H G + P
Sbjct: 170 SQPESEPVNHRVVSTQPESEPVNHSGVSSQP 200
>gi|225437852|ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera]
Length = 351
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E +R LP C+H FH++CID WL+ N CP CR S+
Sbjct: 135 FQEHDMIRVLPNCSHAFHLDCIDIWLQSNANCPLCRSSI 173
>gi|78709024|gb|ABB47999.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|215766723|dbj|BAG98951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 371
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 261 SHKPLCKLVHALMFLKEH-----MSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKC 314
S PL L +L L + + S F + ++R LP C H FH C+D WLR N C
Sbjct: 125 SRLPLFTLASSLAALPKSSRDCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRANPSC 184
Query: 315 PRCRCSV 321
P CR S+
Sbjct: 185 PLCRASI 191
>gi|348514454|ref|XP_003444755.1| PREDICTED: hypothetical protein LOC100696086 [Oreochromis
niloticus]
Length = 1005
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC+H FH +C+D+WLR N CP CR
Sbjct: 966 LRVLPCSHEFHGKCVDKWLRANRTCPICRADA 997
>gi|242049552|ref|XP_002462520.1| hypothetical protein SORBIDRAFT_02g027200 [Sorghum bicolor]
gi|241925897|gb|EER99041.1| hypothetical protein SORBIDRAFT_02g027200 [Sorghum bicolor]
Length = 412
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
S F + +R LP C+H FH +CID WL +V CP CR ++ P D +A
Sbjct: 139 SEFDDDETLRLLPKCSHVFHPDCIDTWLASHVTCPVCRANLVPGADDNA 187
>gi|224130156|ref|XP_002320766.1| predicted protein [Populus trichocarpa]
gi|222861539|gb|EEE99081.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 8/59 (13%)
Query: 286 EVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV-----FPNLDLSALSNLRTADS 338
EVL++ +P C HNFH+ CIDEWLR + CP CR + ++ +A+S +++ DS
Sbjct: 126 EVLRI--MPKCGHNFHLSCIDEWLRKHSTCPVCRFQIQDSFKAKHMRQAAISMVQSIDS 182
>gi|413936543|gb|AFW71094.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 192
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVT 348
VR LP C H FH+ CID WL++ V CP CR DLS + T D +R S S
Sbjct: 134 VRSLPECRHLFHVACIDAWLQMQVTCPLCR------SDLSPRRRVTTYDYDRHSVGSQAD 187
Query: 349 TT 350
++
Sbjct: 188 SS 189
>gi|311249623|ref|XP_003123707.1| PREDICTED: RING finger protein 44 isoform 1 [Sus scrofa]
Length = 432
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|297847202|ref|XP_002891482.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297337324|gb|EFH67741.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 225
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
S F+ Q+R LP C H FH+ CID+WLR ++ CP+CR
Sbjct: 140 SDFVSGEQLRLLPKCNHGFHVRCIDKWLRQHLTCPKCR 177
>gi|224032039|gb|ACN35095.1| unknown [Zea mays]
gi|413956191|gb|AFW88840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 207
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 276 KEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ ++ S+ LE + V R LPC H FH+ CID WLR CP C+ V
Sbjct: 140 QDELTCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQV 189
>gi|225637511|ref|NP_001139498.1| RING finger protein 44 isoform 2 [Mus musculus]
gi|123784632|sp|Q3UHJ8.1|RNF44_MOUSE RecName: Full=RING finger protein 44
gi|74181211|dbj|BAE27859.1| unnamed protein product [Mus musculus]
Length = 407
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 362 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 399
>gi|37360244|dbj|BAC98100.1| mKIAA1100 protein [Mus musculus]
Length = 384
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 339 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 373
>gi|402874436|ref|XP_003901044.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Papio anubis]
Length = 601
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 554 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 593
>gi|356577550|ref|XP_003556887.1| PREDICTED: uncharacterized protein LOC100796218 [Glycine max]
Length = 470
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +CID WL+ CP C+ S+
Sbjct: 438 IRHLPCLHKFHKDCIDPWLQRKASCPVCKSSI 469
>gi|356533336|ref|XP_003535221.1| PREDICTED: uncharacterized protein LOC100789823 [Glycine max]
Length = 735
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +CID WL+ CP C+ S+
Sbjct: 703 IRHLPCLHKFHKDCIDPWLQRKTSCPVCKSSI 734
>gi|344240393|gb|EGV96496.1| RING finger protein 44 [Cricetulus griseus]
Length = 351
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 306 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 340
>gi|300794460|ref|NP_001179642.1| RING finger protein 44 [Bos taurus]
gi|296485561|tpg|DAA27676.1| TPA: ring finger protein 44 [Bos taurus]
Length = 432
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|18088108|gb|AAH20984.1| RNF111 protein, partial [Homo sapiens]
Length = 441
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 394 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 433
>gi|338808408|gb|AEJ07912.1| ring-H2 zinc finger protein, partial [Zea luxurians]
Length = 299
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S F + ++R LP C+H FH +CI EWL +V CP CRC++ P
Sbjct: 90 SEFEDDEELRLLPNCSHAFHPDCIGEWLAGHVTCPVCRCNLDPE 133
>gi|242065508|ref|XP_002454043.1| hypothetical protein SORBIDRAFT_04g023630 [Sorghum bicolor]
gi|241933874|gb|EES07019.1| hypothetical protein SORBIDRAFT_04g023630 [Sorghum bicolor]
Length = 363
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
+R LP CAH FH++CID WLR +V CP CR V
Sbjct: 165 LRLLPKCAHAFHVQCIDTWLRAHVSCPLCRADVM 198
>gi|224067976|ref|XP_002302627.1| predicted protein [Populus trichocarpa]
gi|222844353|gb|EEE81900.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
VR +P C H FH +C+DEWLR+N CP CR S P
Sbjct: 331 VRIIPECKHCFHADCVDEWLRMNSTCPVCRKSPSP 365
>gi|47077491|dbj|BAD18633.1| unnamed protein product [Homo sapiens]
Length = 602
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 555 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 594
>gi|40789045|dbj|BAA83052.2| KIAA1100 protein [Homo sapiens]
Length = 444
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 405 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 436
>gi|451996554|gb|EMD89020.1| hypothetical protein COCHEDRAFT_1195971 [Cochliobolus
heterostrophus C5]
Length = 554
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 15/66 (22%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVK--CPRCRCSVFPNLDLSALSNLRTADS 338
T F + +R LPC H FH EC+D WL LNV CP CR +LR DS
Sbjct: 371 TEDFEKGQDLRVLPCNHKFHPECVDPWL-LNVSGTCPLCRV------------DLRPVDS 417
Query: 339 ERSSAS 344
SSAS
Sbjct: 418 HDSSAS 423
>gi|413955571|gb|AFW88220.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 256
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
F E +VR +P C H FH+ C+D WLR N CP CR
Sbjct: 175 FGEREEVRVMPQCGHGFHVACVDTWLRSNSSCPSCR 210
>gi|413938750|gb|AFW73301.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 75
Score = 46.6 bits (109), Expect = 0.025, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
++ LPC H+FH CI +WLR+N CP C+ ++ D
Sbjct: 36 ELSALPCNHHFHWPCITKWLRMNATCPLCKYNILKGSD 73
>gi|390458749|ref|XP_002743748.2| PREDICTED: RING finger protein 215 [Callithrix jacchus]
Length = 432
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 266 CKLVHALMFLKEHMSTS------LFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRC 319
C+L A L E + + F ++R LPC H FH +C+D WL L CP C+
Sbjct: 364 CRLSRAAQGLPEPSAETCAVCLDYFCNKQRLRVLPCKHEFHRDCVDPWLMLQQTCPLCKF 423
Query: 320 SVFPN 324
+V N
Sbjct: 424 NVLGN 428
>gi|7662486|ref|NP_055716.1| RING finger protein 44 [Homo sapiens]
gi|74758994|sp|Q7L0R7.1|RNF44_HUMAN RecName: Full=RING finger protein 44
gi|24980826|gb|AAH39833.1| Ring finger protein 44 [Homo sapiens]
gi|38969938|gb|AAH63297.1| Ring finger protein 44 [Homo sapiens]
gi|119605477|gb|EAW85071.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|119605478|gb|EAW85072.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|168269688|dbj|BAG09971.1| RING finger protein 44 [synthetic construct]
Length = 432
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|73953315|ref|XP_546217.2| PREDICTED: RING finger protein 44 isoform 1 [Canis lupus
familiaris]
Length = 431
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 392 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 423
>gi|115448033|ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group]
gi|41052984|dbj|BAD07893.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|41053267|dbj|BAD07693.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|113537327|dbj|BAF09710.1| Os02g0692000 [Oryza sativa Japonica Group]
gi|215697950|dbj|BAG92134.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 389
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E +R LP C+H FH+ CID WL+ + CP CRC++
Sbjct: 171 FREGESLRLLPKCSHAFHVPCIDTWLKSHSNCPLCRCNI 209
>gi|297596644|ref|NP_001042861.2| Os01g0311400 [Oryza sativa Japonica Group]
gi|20805087|dbj|BAB92759.1| hypothetical protein [Oryza sativa Japonica Group]
gi|20805160|dbj|BAB92830.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255673166|dbj|BAF04775.2| Os01g0311400 [Oryza sativa Japonica Group]
Length = 198
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ R LP C H FH C+D WLRL+ CP CR SV
Sbjct: 138 ECRALPRCGHRFHASCVDGWLRLHTTCPLCRASV 171
>gi|345322798|ref|XP_001507054.2| PREDICTED: E3 ubiquitin-protein ligase RNF130-like [Ornithorhynchus
anatinus]
Length = 422
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTT 349
VR LPC H FH C+D WL + CP C+ ++ L + + N+ D +
Sbjct: 280 VRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGI--VPNVPCTD------NVAFDM 331
Query: 350 TRYVRTQPSSQSY----LVRMQGL-LSPVHM-GNTRLPNDTDIALQTVE 392
R+ R+QP+++ L L L P+ G ++LP D ++ +T E
Sbjct: 332 ERFTRSQPANRRSALGDLANDSSLGLEPLRTSGMSQLPQDGELTPRTGE 380
>gi|149726055|ref|XP_001502682.1| PREDICTED: RING finger protein 44 [Equus caballus]
Length = 432
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|145518892|ref|XP_001445318.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412762|emb|CAK77921.1| unnamed protein product [Paramecium tetraurelia]
Length = 148
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 293 LPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRT 335
LPC H +H C+D WL+ + KCP CR V L AL N+
Sbjct: 111 LPCKHIYHKSCVDSWLQSSTKCPNCRSDV-----LEALKNMEK 148
>gi|428170345|gb|EKX39271.1| hypothetical protein GUITHDRAFT_154500 [Guillardia theta CCMP2712]
Length = 295
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+VR +PCAH+FH +CI WL++ CP CRC V
Sbjct: 196 EVRQMPCAHSFHEDCIVNWLQICNNCPCCRCEV 228
>gi|67078432|ref|NP_001019966.1| RING finger protein 44 [Rattus norvegicus]
gi|81908627|sp|Q4V7B8.1|RNF44_RAT RecName: Full=RING finger protein 44
gi|66911650|gb|AAH98030.1| Ring finger protein 44 [Rattus norvegicus]
gi|149039917|gb|EDL94033.1| ring finger protein 44, isoform CRA_a [Rattus norvegicus]
gi|149039918|gb|EDL94034.1| ring finger protein 44, isoform CRA_a [Rattus norvegicus]
gi|149039919|gb|EDL94035.1| ring finger protein 44, isoform CRA_a [Rattus norvegicus]
Length = 350
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 305 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 339
>gi|413943954|gb|AFW76603.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 331
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLD 326
+VR LP C H FH+ECID W + CP CR V +LD
Sbjct: 145 KVRTLPKCGHAFHVECIDMWFHSHDTCPLCRAPVGGDLD 183
>gi|356522514|ref|XP_003529891.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
max]
Length = 372
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+R +P C H FH +CIDEWLR+N CP CR S P+
Sbjct: 328 IRLIPECKHCFHADCIDEWLRINTTCPVCRNSPSPS 363
>gi|358348777|ref|XP_003638419.1| RING finger protein [Medicago truncatula]
gi|355504354|gb|AES85557.1| RING finger protein [Medicago truncatula]
gi|388513305|gb|AFK44714.1| unknown [Medicago truncatula]
Length = 164
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Query: 289 QVRGLPCAHNFHIECIDEWL-RLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVV 347
VR LPC H FH C++ W R N CP CRCS+ S+ R A +ER S ++
Sbjct: 107 HVRKLPCRHVFHRHCLNGWFHRFNFNCPLCRCSLH--------SDERVALTERRVGSQLI 158
Query: 348 T 348
+
Sbjct: 159 S 159
>gi|348521174|ref|XP_003448101.1| PREDICTED: RING finger protein 38-like [Oreochromis niloticus]
Length = 742
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 703 LRVLPCNHEFHTKCVDKWLKANRTCPICR 731
>gi|225443516|ref|XP_002272067.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
Length = 218
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNL 325
S E +VR LP C H FH ECID WL ++ CP CR P L
Sbjct: 108 STIEEGAKVRPLPNCKHEFHAECIDMWLSSHITCPICRTGAEPQL 152
>gi|255576814|ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
gi|223531217|gb|EEF33062.1| ring finger protein, putative [Ricinus communis]
Length = 376
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E ++R +P C+H FHI+CID WL+ N CP CR S+
Sbjct: 140 FQENEKLRIIPNCSHVFHIDCIDVWLQNNANCPLCRNSI 178
>gi|225637515|ref|NP_598825.2| RING finger protein 44 isoform 4 [Mus musculus]
gi|74213634|dbj|BAE35621.1| unnamed protein product [Mus musculus]
gi|74213677|dbj|BAE35639.1| unnamed protein product [Mus musculus]
gi|148709209|gb|EDL41155.1| ring finger protein 44, isoform CRA_a [Mus musculus]
gi|148709210|gb|EDL41156.1| ring finger protein 44, isoform CRA_a [Mus musculus]
gi|148709211|gb|EDL41157.1| ring finger protein 44, isoform CRA_a [Mus musculus]
Length = 350
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 305 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 339
>gi|402873505|ref|XP_003900614.1| PREDICTED: RING finger protein 44 isoform 1 [Papio anubis]
Length = 432
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|397470558|ref|XP_003806886.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44 [Pan
paniscus]
Length = 432
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|344265309|ref|XP_003404727.1| PREDICTED: RING finger protein 44 [Loxodonta africana]
Length = 432
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|194379472|dbj|BAG63702.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 312 LRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|432848440|ref|XP_004066346.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 712
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 673 LRVLPCNHEFHAKCVDKWLKANRTCPICRADA 704
>gi|225637513|ref|NP_001139499.1| RING finger protein 44 isoform 3 [Mus musculus]
gi|74179060|dbj|BAE42740.1| unnamed protein product [Mus musculus]
Length = 351
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 306 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 340
>gi|414866068|tpg|DAA44625.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 280
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 276 KEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ ++ S+ LE + V R LPC H FH+ CID WLR CP C+ V
Sbjct: 213 EDELTCSVCLEQVTVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQV 262
>gi|327286506|ref|XP_003227971.1| PREDICTED: RING finger protein 44-like [Anolis carolinensis]
Length = 445
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
EV Q+ R LPC H FH +CID+WL+ N CP CR
Sbjct: 400 FEVRQLLRVLPCNHEFHAKCIDKWLKANRTCPICRADA 437
>gi|326533810|dbj|BAK05436.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
+ R LP CAH FH EC+D WLR + CP CR V P
Sbjct: 108 KARRLPKCAHLFHAECVDAWLRAHCTCPMCRAPVGP 143
>gi|52545897|emb|CAD39147.2| hypothetical protein [Homo sapiens]
Length = 354
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 315 LRVLPCNHEFHTKCVDKWLKANRTCPICR 343
>gi|431892704|gb|ELK03137.1| RING finger protein 44 [Pteropus alecto]
Length = 351
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 312 LRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+ E ++R LPC H FH++C+D WLR+ CP C+
Sbjct: 283 YREKEEMRQLPCTHMFHLKCVDRWLRIISSCPLCK 317
>gi|402873507|ref|XP_003900615.1| PREDICTED: RING finger protein 44 isoform 2 [Papio anubis]
Length = 351
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 312 LRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|355716966|gb|AES05780.1| ring finger protein 44 [Mustela putorius furo]
Length = 431
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|357118462|ref|XP_003560973.1| PREDICTED: putative RING-H2 finger protein ATL49-like [Brachypodium
distachyon]
Length = 440
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLS 328
+R LP C H FH+ CID WL + CP CR SV +LDL+
Sbjct: 138 LRLLPTCGHAFHVPCIDAWLLSHSTCPLCRRSVLADLDLA 177
>gi|224124036|ref|XP_002319229.1| predicted protein [Populus trichocarpa]
gi|222857605|gb|EEE95152.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
S F E +R LP C+H FH+ CID WL+ + CP CR ++ P
Sbjct: 144 SEFQENESLRLLPKCSHAFHLPCIDTWLKSHASCPLCRANIAP 186
>gi|224081206|ref|XP_002306334.1| predicted protein [Populus trichocarpa]
gi|222855783|gb|EEE93330.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNV-KCPRCRCSVFPNLDLSALSNLRT 335
S F E VR L C H FH +C+DEWL+ + CP CR V P+ L+ +++
Sbjct: 68 SEFSEGESVRKLKCKHTFHKDCLDEWLQQCLATCPLCRAKVLPDEILAKYDRMQS 122
>gi|119605476|gb|EAW85070.1| ring finger protein 44, isoform CRA_a [Homo sapiens]
Length = 408
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 369 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 400
>gi|18855016|gb|AAL79708.1|AC087599_27 putative zinc finger protein [Oryza sativa Japonica Group]
Length = 354
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 261 SHKPLCKLVHALMFLKEH-----MSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKC 314
S PL L +L L + + S F + ++R LP C H FH C+D WLR N C
Sbjct: 108 SRLPLFTLASSLAALPKSSRDCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRANPSC 167
Query: 315 PRCRCSV 321
P CR S+
Sbjct: 168 PLCRASI 174
>gi|429962863|gb|ELA42407.1| hypothetical protein VICG_00506 [Vittaforma corneae ATCC 50505]
Length = 248
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADS 338
V+ LPC H+FH EC+DEWL + CP C+ S DL + +ADS
Sbjct: 203 VKFLPCDHHFHCECVDEWLNIRDTCPLCKKSTSILYDL-----IESADS 246
>gi|335283091|ref|XP_003354234.1| PREDICTED: RING finger protein 44 isoform 2 [Sus scrofa]
Length = 351
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 312 LRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|297295801|ref|XP_001091221.2| PREDICTED: RING finger protein 44-like [Macaca mulatta]
Length = 432
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
>gi|255072715|ref|XP_002500032.1| predicted protein [Micromonas sp. RCC299]
gi|226515294|gb|ACO61290.1| predicted protein [Micromonas sp. RCC299]
Length = 398
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ E +R LPC H++H CID W +V+CP C+C V
Sbjct: 353 YAEGESLRHLPCLHSYHAGCIDRWFERSVECPLCQCDV 390
>gi|212724133|ref|NP_001131833.1| uncharacterized protein LOC100193208 [Zea mays]
gi|194688576|gb|ACF78372.1| unknown [Zea mays]
gi|195627610|gb|ACG35635.1| protein binding protein [Zea mays]
gi|414866067|tpg|DAA44624.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 280
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 276 KEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ ++ S+ LE + V R LPC H FH+ CID WLR CP C+ V
Sbjct: 213 EDELTCSVCLEQVTVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQV 262
>gi|15221305|ref|NP_177600.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324797|gb|AAG52359.1|AC011765_11 putative RING zinc finger protein; 84572-85321 [Arabidopsis
thaliana]
gi|332197494|gb|AEE35615.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 249
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
V LPC H FH +CI++WL+LN CP CR S+
Sbjct: 197 VAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 228
>gi|410949128|ref|XP_003981276.1| PREDICTED: RING finger protein 44 isoform 2 [Felis catus]
Length = 351
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 312 LRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|223998348|ref|XP_002288847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975955|gb|EED94283.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 62
Score = 46.6 bits (109), Expect = 0.027, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
++R LPC+H FH EC+D WL C CR S+ P
Sbjct: 26 ELRRLPCSHCFHKECVDSWLSTKDTCALCRKSIVP 60
>gi|194701592|gb|ACF84880.1| unknown [Zea mays]
gi|414877243|tpg|DAA54374.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 254
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ R LP C H FHIECI W R N CP CR V
Sbjct: 155 KARALPRCGHRFHIECIGAWFRGNATCPLCRADV 188
>gi|195109971|ref|XP_001999555.1| GI23012 [Drosophila mojavensis]
gi|193916149|gb|EDW15016.1| GI23012 [Drosophila mojavensis]
Length = 544
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVK-CPRCRCSVFPNLDLSALSNLRTADSERSS 342
F+E ++R LPC+H +H CID WL N + CP C+ VF R + + + S
Sbjct: 248 FVEDDKLRVLPCSHPYHSHCIDPWLTENRRVCPICKRKVF------TKGETRASRNRQPS 301
Query: 343 ASSVVTTTRYVRTQPSS 359
S TT ++ QP S
Sbjct: 302 LDSDDDTTPLLQQQPQS 318
>gi|410040033|ref|XP_001136491.3| PREDICTED: RING finger protein 44 isoform 2 [Pan troglodytes]
Length = 430
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 391 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 422
>gi|297596317|ref|NP_001042380.2| Os01g0212700 [Oryza sativa Japonica Group]
gi|56201670|dbj|BAD73148.1| ring-H2 zinc finger protein-like [Oryza sativa Japonica Group]
gi|215766139|dbj|BAG98367.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672992|dbj|BAF04294.2| Os01g0212700 [Oryza sativa Japonica Group]
Length = 185
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+VR LP C H FH EC+D WLR + CP CR +V
Sbjct: 111 KVRQLPKCGHLFHAECVDAWLRAHSTCPMCRAAV 144
>gi|301772736|ref|XP_002921790.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44-like
[Ailuropoda melanoleuca]
Length = 498
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 459 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 490
>gi|293336208|ref|NP_001167698.1| RING-H2 finger protein ATL2L [Zea mays]
gi|195651977|gb|ACG45456.1| RING-H2 finger protein ATL2L [Zea mays]
Length = 254
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ R LP C H FHIECI W R N CP CR V
Sbjct: 155 KARALPRCGHRFHIECIGAWFRGNATCPLCRADV 188
>gi|413923942|gb|AFW63874.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 207
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F+E Q+R LP CAH FH C+D WL + CP CR ++
Sbjct: 131 FVEGDQLRVLPRCAHGFHAACVDTWLAAHASCPSCRATIV 170
>gi|125583317|gb|EAZ24248.1| hypothetical protein OsJ_07998 [Oryza sativa Japonica Group]
Length = 386
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E +R LP C+H FH+ CID WL+ + CP CRC++
Sbjct: 168 FREGESLRLLPKCSHAFHVPCIDTWLKSHSNCPLCRCNI 206
>gi|449453127|ref|XP_004144310.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449488257|ref|XP_004157983.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 347
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
Query: 212 AVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYGFTSHKPLCKLVHA 271
A E I+ LPK+R + P LE F + + + P G+ H H
Sbjct: 242 ASEDEIRALPKYRFH------QDNP--LESFDNDKKQEVGMTLEP-GYNGHTT----EHT 288
Query: 272 LMFLKEHMSTSL--FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
L L ++ +Q+ LPC H+FH CI +WLR+N CP C+ S+
Sbjct: 289 LNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 340
>gi|444726338|gb|ELW66875.1| E3 ubiquitin-protein ligase RNF130 [Tupaia chinensis]
Length = 544
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 21/113 (18%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTT 349
VR LPC H FH C+D WL + CP C+ ++ L + + NL D +
Sbjct: 173 VRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGI--VPNLPCTD------NVAFDM 224
Query: 350 TRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENGGVLSATQN 402
R RTQP+++ +GN L +D+ + L+ + G+ Q+
Sbjct: 225 ERLTRTQPANRRS-----------ALGN--LTSDSSLGLEPLRTSGIAPLPQD 264
>gi|118386807|ref|XP_001026521.1| hypothetical protein TTHERM_00328570 [Tetrahymena thermophila]
gi|89308288|gb|EAS06276.1| hypothetical protein TTHERM_00328570 [Tetrahymena thermophila
SB210]
Length = 883
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDL 327
F+ +V+ C+H FHIECI +W++ N CP CR S F LD+
Sbjct: 572 FVPQEKVQKTICSHTFHIECIQDWIQKNDNCPLCRQS-FDILDM 614
>gi|403330920|gb|EJY64375.1| Zinc finger protein [Oxytricha trifallax]
Length = 507
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 277 EHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
E ++ ++ ++VL+V +GL C H FH +CI++WL++ ++CP C+ V
Sbjct: 457 ESVNCAVCIDVLKVGSMAKGLQCGHKFHPKCINDWLKIKLQCPLCKKDV 505
>gi|390468395|ref|XP_002753235.2| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Callithrix jacchus]
Length = 594
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 547 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 586
>gi|326524239|dbj|BAK00503.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 314
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+VR LP CAH FH++CID W + CP CR V P+
Sbjct: 132 KVRTLPKCAHRFHVDCIDMWFHSHDTCPLCRAPVGPD 168
>gi|426351155|ref|XP_004043123.1| PREDICTED: RING finger protein 44 [Gorilla gorilla gorilla]
Length = 413
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 374 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 405
>gi|414875736|tpg|DAA52867.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 178
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LP CAH+FH +C+D WLR + CP CR +V
Sbjct: 114 KLRRLPKCAHSFHADCVDAWLRAHSTCPMCRAAVL 148
>gi|17160934|gb|AAH17630.1| Ring finger protein 44 [Mus musculus]
gi|23272022|gb|AAH35548.1| Ring finger protein 44 [Mus musculus]
Length = 339
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 285 LEVLQV-RGLPCAHNFHIECIDEWLRLNVKCPRCR 318
EV Q+ R LPC H FH +C+D+WL+ N CP CR
Sbjct: 294 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 328
>gi|395755323|ref|XP_002832944.2| PREDICTED: RING finger protein 44, partial [Pongo abelii]
Length = 344
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 305 LRVLPCNHEFHTKCVDKWLKANRTCPICR 333
>gi|326521562|dbj|BAK00357.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
VR LP C H FH+EC+D WLR CP CR
Sbjct: 134 VRQLPNCGHVFHVECVDAWLRTRTSCPLCR 163
>gi|385305599|gb|EIF49561.1| ring-8 protein [Dekkera bruxellensis AWRI1499]
Length = 603
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVK-CPRCRCSVFPNLDLSALS----NLRTADS 338
F + VRGL C H FH+ECID WL CP C+ ++D S + R DS
Sbjct: 260 FTDDCMVRGLSCGHAFHVECIDPWLTGKRGCCPTCKHDFVEDVDGSGRGDGNPDFRDFDS 319
Query: 339 ----ERSSASSVVTTTRYVRTQPSSQSYLVRMQGLLSPVHMGNTRLPNDTDIALQTVENG 394
+R+ S+V+ + T+ + + L M LLS + +T P D D L+ E
Sbjct: 320 LFDMDRNDNSNVIAY--HKPTEFKANTLLCAM--LLSRIGRYHTXGPVDLD-GLEDDEGA 374
Query: 395 GVLSATQNR 403
V S R
Sbjct: 375 SVESEAVTR 383
>gi|332263048|ref|XP_003280568.1| PREDICTED: RING finger protein 44 [Nomascus leucogenys]
Length = 423
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 384 LRVLPCNHEFHTKCVDKWLKANRTCPICRADA 415
>gi|218195198|gb|EEC77625.1| hypothetical protein OsI_16613 [Oryza sativa Indica Group]
gi|222629194|gb|EEE61326.1| hypothetical protein OsJ_15437 [Oryza sativa Japonica Group]
Length = 713
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH ECIDEWLR CP C+ +
Sbjct: 681 IRRLPCFHMFHKECIDEWLRRKKLCPVCKSGI 712
>gi|402073821|gb|EJT69373.1| RING-7 protein [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 517
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 53/140 (37%), Gaps = 22/140 (15%)
Query: 201 PGLYLTAA--QREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEWQADVKFYPYG 258
P L L +A QR+ + L +P D P GN P G
Sbjct: 279 PALELESAEQQRKRKNETGNTMQVHHLSTIPEDAEAVP-------SGNNSATRESRLPAG 331
Query: 259 ------FTSHKPLCKLVHALMFLKEHMSTSL----FLEVLQVRGLPCAHNFHIECIDEWL 308
T P A +EH+ S+ FL VR LPC H FH CID WL
Sbjct: 332 DVAAAAATLEIPATIAEAAEPVGEEHLGCSICTDDFLVGEDVRVLPCDHKFHPPCIDPWL 391
Query: 309 RLNVK--CPRCRCSVFPNLD 326
+NV CP CR + P+ D
Sbjct: 392 -INVSGTCPLCRLDLQPHND 410
>gi|356548935|ref|XP_003542854.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
Length = 247
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
Q LPC+H +H ECI +WL +N KCP C VF
Sbjct: 208 QQMKLPCSHVYHGECITKWLSINKKCPVCNTEVF 241
>gi|357472837|ref|XP_003606703.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355507758|gb|AES88900.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 268
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
VR LPC H FH CID+WLR CP C+ +
Sbjct: 219 VRSLPCLHQFHASCIDQWLRRKRTCPVCKFKI 250
>gi|351708433|gb|EHB11352.1| RING finger protein 44 [Heterocephalus glaber]
Length = 437
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 398 LRVLPCNHEFHAKCVDKWLKANRTCPICRADA 429
>gi|324506856|gb|ADY42915.1| E3 ubiquitin-protein ligase Arkadia [Ascaris suum]
Length = 680
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 20/32 (62%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH CID WL N KCP CR +
Sbjct: 641 IRVLPCTHYFHTGCIDRWLIYNKKCPMCRVDI 672
>gi|255645317|gb|ACU23155.1| unknown [Glycine max]
Length = 247
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
Q LPC+H +H ECI +WL +N KCP C VF
Sbjct: 208 QQMKLPCSHVYHGECITKWLSINKKCPVCNTEVF 241
>gi|259490583|ref|NP_001159093.1| RING-H2 finger protein ATL2L [Zea mays]
gi|195657207|gb|ACG48071.1| RING-H2 finger protein ATL2L [Zea mays]
Length = 252
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
+ R LP C H FHIECI W R N CP CR V
Sbjct: 153 KARALPRCGHRFHIECIGAWFRGNATCPLCRADV 186
>gi|226499462|ref|NP_001151707.1| RING-H2 finger protein ATL5A [Zea mays]
gi|195649195|gb|ACG44065.1| RING-H2 finger protein ATL5A [Zea mays]
Length = 181
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F + +VR LP CAH FH+ C+D WL + CP CR SV
Sbjct: 114 FADGEKVRVLPRCAHGFHVRCVDTWLLSHDSCPTCRASVL 153
>gi|357450179|ref|XP_003595366.1| RING-H2 finger protein ATL3J [Medicago truncatula]
gi|355484414|gb|AES65617.1| RING-H2 finger protein ATL3J [Medicago truncatula]
Length = 298
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
+R LP C H FH ECID WL N CP CR SVF +
Sbjct: 96 LRLLPLCCHAFHTECIDAWLSSNQTCPLCRSSVFAS 131
>gi|115458678|ref|NP_001052939.1| Os04g0450400 [Oryza sativa Japonica Group]
gi|21740712|emb|CAD40833.1| OSJNBa0086B14.5 [Oryza sativa Japonica Group]
gi|113564510|dbj|BAF14853.1| Os04g0450400 [Oryza sativa Japonica Group]
gi|125548510|gb|EAY94332.1| hypothetical protein OsI_16100 [Oryza sativa Indica Group]
gi|125590562|gb|EAZ30912.1| hypothetical protein OsJ_14993 [Oryza sativa Japonica Group]
Length = 415
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F + VR LP C H FH+ CID WLR +V CP CR V
Sbjct: 209 FQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVL 248
>gi|115459386|ref|NP_001053293.1| Os04g0511600 [Oryza sativa Japonica Group]
gi|38345315|emb|CAE03385.2| OSJNBa0004N05.9 [Oryza sativa Japonica Group]
gi|113564864|dbj|BAF15207.1| Os04g0511600 [Oryza sativa Japonica Group]
gi|116311076|emb|CAH68006.1| OSIGBa0157K09-H0214G12.17 [Oryza sativa Indica Group]
Length = 730
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH ECIDEWLR CP C+ +
Sbjct: 698 IRRLPCFHMFHKECIDEWLRRKKLCPVCKSGI 729
>gi|66811790|ref|XP_640074.1| hypothetical protein DDB_G0282479 [Dictyostelium discoideum AX4]
gi|60468089|gb|EAL66099.1| hypothetical protein DDB_G0282479 [Dictyostelium discoideum AX4]
Length = 320
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++ LPC H++H +C+++WL++ CP C+ SVF
Sbjct: 286 IKTLPCIHHYHSDCVEKWLKIKSVCPICKTSVF 318
>gi|255559032|ref|XP_002520539.1| protein binding protein, putative [Ricinus communis]
gi|223540381|gb|EEF41952.1| protein binding protein, putative [Ricinus communis]
Length = 397
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 275 LKEHMSTSLFLEVLQ----VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
L++ ++ S+ LE + VR LPC H FH CID WLR CP C+
Sbjct: 204 LEDELTCSICLEQVNKGEIVRSLPCLHQFHTNCIDPWLRQQGTCPVCK 251
>gi|145545913|ref|XP_001458640.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426461|emb|CAK91243.1| unnamed protein product [Paramecium tetraurelia]
Length = 438
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 286 EVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADS 338
E QVR C H FH++C+D WL N CP CR S + L ++ LR DS
Sbjct: 353 EQDQVRLTYCTHIFHVQCLDNWLEKNRICPACR-SELDEVTLIKIAKLRKNDS 404
>gi|326529613|dbj|BAK04753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E + LPC H++H +CI++WL+LN CP C V
Sbjct: 247 FEEGESLVALPCKHSYHSDCINQWLQLNKVCPMCSAEV 284
>gi|18423810|ref|NP_568834.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30696669|ref|NP_851197.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|21553392|gb|AAM62485.1| unknown [Arabidopsis thaliana]
gi|332009321|gb|AED96704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332009322|gb|AED96705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 343
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+VR LPC+H FH +C+D+WLR+ CP C+
Sbjct: 309 EVRKLPCSHKFHSKCVDQWLRIISCCPLCK 338
>gi|9369405|gb|AAF87153.1|AC002423_18 T23E23.15 [Arabidopsis thaliana]
Length = 406
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
F E ++R LP C+H FHI+CID WL N CP CR ++F
Sbjct: 188 FSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLF 227
>gi|297744127|emb|CBI37097.3| unnamed protein product [Vitis vinifera]
Length = 247
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
F E +R LP C+H FH++CID WL+ N CP CR S+
Sbjct: 135 FQEHDMIRVLPNCSHAFHLDCIDIWLQSNANCPLCRSSI 173
>gi|194692670|gb|ACF80419.1| unknown [Zea mays]
gi|414866069|tpg|DAA44626.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 207
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 276 KEHMSTSLFLEVLQV----RGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ ++ S+ LE + V R LPC H FH+ CID WLR CP C+ V
Sbjct: 140 EDELTCSVCLEQVTVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQV 189
>gi|357140944|ref|XP_003572015.1| PREDICTED: RING-H2 finger protein ATL44-like [Brachypodium
distachyon]
Length = 228
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
S F E +VR +P C H FH+ C+D WLR N CP CR
Sbjct: 134 SEFGEREEVRVMPQCGHGFHVACVDAWLRSNSSCPSCR 171
>gi|169806174|ref|XP_001827832.1| zinc finger, C3HC4 type [Enterocytozoon bieneusi H348]
gi|161779280|gb|EDQ31303.1| zinc finger, C3HC4 type [Enterocytozoon bieneusi H348]
Length = 247
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
++ LPC H+FH ECIDEW + CP C+ S+
Sbjct: 202 IKILPCNHHFHSECIDEWFNVKDSCPLCKKSI 233
>gi|444706661|gb|ELW47987.1| RING finger protein 44 [Tupaia chinensis]
Length = 278
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 239 LRVLPCNHEFHTKCVDKWLKANRTCPICR 267
>gi|348575005|ref|XP_003473280.1| PREDICTED: RING finger protein 44-like [Cavia porcellus]
Length = 432
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 393 LRVLPCNHEFHAKCVDKWLKANRTCPICRADA 424
>gi|66392140|ref|NP_001018301.1| goliath homolog [Danio rerio]
gi|63101181|gb|AAH95880.1| Zgc:113271 [Danio rerio]
gi|182888986|gb|AAI64486.1| Zgc:113271 protein [Danio rerio]
Length = 392
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSSASSVVTT 349
VR LPC H FH C+D WL + CP C+ ++ L + + NL D +
Sbjct: 250 VRILPCKHVFHKMCVDPWLNEHCTCPMCKLNILKALGV--MPNLPCVD------NMAFDM 301
Query: 350 TRYVRTQPSSQ-SYLVRMQG----LLSPV-HMGNTRLPNDTDIALQTVENGGVLSATQ-- 401
R R+Q SSQ + LV + L P+ H +++LP+D ++ ++ E ++
Sbjct: 302 DRMSRSQTSSQRTALVDLSSETSISLEPLRHSSSSQLPSDEELIPRSGEINIAVTTGHFF 361
Query: 402 NRIAMGPFS 410
NR ++ P S
Sbjct: 362 NRNSVSPRS 370
>gi|21754565|dbj|BAC04531.1| unnamed protein product [Homo sapiens]
gi|119597965|gb|EAW77559.1| ring finger protein 111, isoform CRA_e [Homo sapiens]
Length = 370
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 282 SLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
S+ E VR LPC H FH C+D+WL N KCP CR +
Sbjct: 323 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 362
>gi|395521044|ref|XP_003764631.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Sarcophilus
harrisii]
Length = 242
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
++R LPC H FH+ CID WL N CP CR V
Sbjct: 204 KLRQLPCTHEFHVHCIDRWLAENNTCPICRQPVL 237
>gi|222622527|gb|EEE56659.1| hypothetical protein OsJ_06075 [Oryza sativa Japonica Group]
Length = 71
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 290 VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLS 328
VR +P C H FH+ECID WL + CP CRC + P D++
Sbjct: 12 VREMPSCKHLFHVECIDMWLHSHRTCPMCRCDLSPPRDVA 51
>gi|356544176|ref|XP_003540530.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
Length = 247
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVF 322
Q LPC+H +H ECI +WL +N KCP C VF
Sbjct: 208 QQMKLPCSHVYHGECITKWLSINKKCPVCNTEVF 241
>gi|196004494|ref|XP_002112114.1| hypothetical protein TRIADDRAFT_24155 [Trichoplax adhaerens]
gi|190586013|gb|EDV26081.1| hypothetical protein TRIADDRAFT_24155, partial [Trichoplax
adhaerens]
Length = 427
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 275 LKEHMSTSLFLEVLQ-VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
LKEH ++ E L+ R LPC H FH C+ WL + CP CR S+
Sbjct: 253 LKEHQKCAICWEKLESARKLPCTHLFHSSCLQSWLEQDTTCPTCRLSL 300
>gi|149568981|ref|XP_001517302.1| PREDICTED: RING finger protein 38, partial [Ornithorhynchus
anatinus]
Length = 460
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC+H FH +C+D+WL+ N CP CR
Sbjct: 421 LRVLPCSHEFHAKCVDKWLKANRTCPICR 449
>gi|357122908|ref|XP_003563155.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 359
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++R LPC H+FH CID+WL +N CP C+
Sbjct: 317 ELRELPCNHHFHCTCIDKWLHINATCPLCK 346
>gi|2894379|emb|CAA74911.1| ring finger protein [Hordeum vulgare subsp. vulgare]
Length = 295
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
S F + ++R LP C H FH+ C+D WLR + CP CR
Sbjct: 214 SEFADKEEIRVLPQCGHGFHVACVDAWLRAHSSCPSCR 251
>gi|52627083|gb|AAU84668.1| At4g28890 [Arabidopsis thaliana]
gi|55167896|gb|AAV43780.1| At4g28890 [Arabidopsis thaliana]
Length = 386
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSN 332
S F V +R LP C H FHI CID+WL + CP CR V D S L+N
Sbjct: 82 SKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTN 133
>gi|451997903|gb|EMD90368.1| hypothetical protein COCHEDRAFT_1139675 [Cochliobolus
heterostrophus C5]
Length = 813
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 281 TSLFLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFP 323
TS+ L+ Q PC H FH +C++ W+R + CP CR S+ P
Sbjct: 770 TSMLLQRRQYMVTPCRHIFHTDCLEGWMRYRLMCPNCRESLPP 812
>gi|357485971|ref|XP_003613273.1| RING finger protein [Medicago truncatula]
gi|355514608|gb|AES96231.1| RING finger protein [Medicago truncatula]
Length = 368
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 284 FLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVF 322
FLE ++R LP C H FHI CID WL N CP CR +++
Sbjct: 149 FLEQDKLRLLPNCNHAFHISCIDTWLLSNSSCPLCRNTLY 188
>gi|355691874|gb|EHH27059.1| hypothetical protein EGK_17168 [Macaca mulatta]
Length = 350
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 311 LRVLPCNHEFHTKCVDKWLKANRTCPICR 339
>gi|344271622|ref|XP_003407636.1| PREDICTED: hypothetical protein LOC100662830 [Loxodonta africana]
Length = 1066
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+R LPC H FH +C+D+WL+ N CP CR
Sbjct: 1027 LRVLPCNHEFHAKCVDKWLKANRTCPICRADA 1058
>gi|242076444|ref|XP_002448158.1| hypothetical protein SORBIDRAFT_06g022310 [Sorghum bicolor]
gi|241939341|gb|EES12486.1| hypothetical protein SORBIDRAFT_06g022310 [Sorghum bicolor]
Length = 725
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 290 VRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
+R LPC H FH ECIDEWL+ CP C+
Sbjct: 693 IRHLPCFHKFHKECIDEWLKRKKLCPVCK 721
>gi|15222068|ref|NP_175346.1| RING-H2 finger protein ATL75 [Arabidopsis thaliana]
gi|68565250|sp|Q94BY6.1|ATL75_ARATH RecName: Full=RING-H2 finger protein ATL75
gi|14517432|gb|AAK62606.1| At1g49200/F27J15_35 [Arabidopsis thaliana]
gi|20147327|gb|AAM10377.1| At1g49200/F27J15_35 [Arabidopsis thaliana]
gi|332194283|gb|AEE32404.1| RING-H2 finger protein ATL75 [Arabidopsis thaliana]
Length = 226
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 318
S F+ Q+R LP C H FH+ CID+WL+ ++ CP+CR
Sbjct: 141 SDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178
>gi|357131236|ref|XP_003567245.1| PREDICTED: RING-H2 finger protein ATL66-like [Brachypodium
distachyon]
Length = 169
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 289 QVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSA 329
+V+ LP C H FH EC+D WLR CP CR S+ P+ +A
Sbjct: 120 KVKALPRCGHCFHPECVDAWLRSRPSCPLCRASLLPDATKAA 161
>gi|357122910|ref|XP_003563156.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 362
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 289 QVRGLPCAHNFHIECIDEWLRLNVKCPRCR 318
++R LPC H+FH CID+WL +N CP C+
Sbjct: 320 ELRELPCNHHFHCTCIDKWLHINATCPLCK 349
>gi|242087091|ref|XP_002439378.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
gi|241944663|gb|EES17808.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
Length = 410
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 284 FLEVLQVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSV 321
+++ +R LPC H FH +C+D+WL++N CP C+ +
Sbjct: 343 YVDNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEI 380
>gi|125542426|gb|EAY88565.1| hypothetical protein OsI_10038 [Oryza sativa Indica Group]
Length = 290
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F+ +++ LP C+H FHI+CID WL NV CP CR V
Sbjct: 117 SEFVRDERLKLLPSCSHAFHIDCIDTWLHHNVSCPLCRTVV 157
>gi|186514561|ref|NP_194618.3| E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana]
gi|68565150|sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL42; AltName:
Full=RING-H2 finger protein ATL42; Flags: Precursor
gi|4972078|emb|CAB43903.1| putative protein [Arabidopsis thaliana]
gi|7269744|emb|CAB81477.1| putative protein [Arabidopsis thaliana]
gi|66865954|gb|AAY57611.1| RING finger family protein [Arabidopsis thaliana]
gi|332660159|gb|AEE85559.1| E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana]
Length = 432
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSN 332
S F V +R LP C H FHI CID+WL + CP CR V D S L+N
Sbjct: 128 SKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTN 179
>gi|242061208|ref|XP_002451893.1| hypothetical protein SORBIDRAFT_04g009330 [Sorghum bicolor]
gi|241931724|gb|EES04869.1| hypothetical protein SORBIDRAFT_04g009330 [Sorghum bicolor]
Length = 225
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Query: 282 SLFLEVLQ----VRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSVFPN 324
S+ LE +Q VR LP C H FH++CID WL + CP CRC++ P+
Sbjct: 151 SVCLEDVQGGEMVRQLPACKHLFHVQCIDMWLHSHRTCPVCRCNLLPS 198
>gi|222613291|gb|EEE51423.1| hypothetical protein OsJ_32501 [Oryza sativa Japonica Group]
Length = 318
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 261 SHKPLCKLVHALMFLKEH-----MSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKC 314
S PL L +L L + + S F + ++R LP C H FH C+D WLR N C
Sbjct: 108 SRLPLFTLASSLAALPKSSRDCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRANPSC 167
Query: 315 PRCRCSV 321
P CR S+
Sbjct: 168 PLCRASI 174
>gi|326511086|dbj|BAJ91890.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528675|dbj|BAJ97359.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 248
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 45/125 (36%), Gaps = 48/125 (38%)
Query: 203 LYLTAAQREAVEALIQELPKFRLKAV-----PTDCSECPICLEEFHVGNEWQADVKFYPY 257
L+ T ALI ++P R A TD + C +CL++F P
Sbjct: 159 LFETGCTGGMSAALINKIPAIRFSAATDSAQETDRTCCSVCLQDFG------------PR 206
Query: 258 GFTSHKPLCKLVHALMFLKEHMSTSLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPR 316
F VR LP C H FH+ CID+WL+ N CP
Sbjct: 207 QF------------------------------VRALPQCQHIFHVRCIDDWLQRNSSCPL 236
Query: 317 CRCSV 321
CR V
Sbjct: 237 CRGGV 241
>gi|27261477|gb|AAN87743.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|125584934|gb|EAZ25598.1| hypothetical protein OsJ_09425 [Oryza sativa Japonica Group]
Length = 290
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 282 SLFLEVLQVRGLP-CAHNFHIECIDEWLRLNVKCPRCRCSV 321
S F+ +++ LP C+H FHI+CID WL NV CP CR V
Sbjct: 117 SEFVRDERLKLLPSCSHAFHIDCIDTWLHHNVSCPLCRTVV 157
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.138 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,747,128,721
Number of Sequences: 23463169
Number of extensions: 275905618
Number of successful extensions: 801275
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5202
Number of HSP's successfully gapped in prelim test: 1136
Number of HSP's that attempted gapping in prelim test: 793121
Number of HSP's gapped (non-prelim): 9082
length of query: 425
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 280
effective length of database: 8,957,035,862
effective search space: 2507970041360
effective search space used: 2507970041360
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 78 (34.7 bits)