BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>014403
MPSNYLGSPVLKSSQFAGRFLGGKEVRLLDGESFKDVQSGTLGQYTKEFLWLGSSWMSRK
KRKHYQSFCRNGVKVSVHDFVYVLAEENKRLIAYLEDMYEDSRGNKMVVVRWFHKIDEVG
IFLPHNFNDREIFFSLCLQDLSIECIDGLATVLSPQHFEKFMNEATYPQLQPFICDKQFE
NDDVKPFDITLVKGYWRQEIIRHLFTFTSPKNCSSSQQPFDGQRAEKIVNDVVETRPKKR
LRQSKDADVCDYTNRKEPMDAACMDLKISTKSSVDGGVGTLAGVGGAALLSKKEADPSSQ
YLKVGSHVEVLSQDSGMRGCWYRASVIKKHKDKVKVRYNDVQDAADEVNLLEEWVLASRV
AAPDQLGLRVSGRRIVRPSPESHKGRVSWAIDVGTIVDAWWHDGWWEGIVIQKDSEDKLH
VYFPG

High Scoring Gene Products

Symbol, full name Information P value
AT1G68580 protein from Arabidopsis thaliana 8.4e-97
AT5G55600 protein from Arabidopsis thaliana 1.5e-53
G2484-1
G2484-1 protein
protein from Arabidopsis thaliana 1.8e-07
AT1G09320 protein from Arabidopsis thaliana 6.3e-06
AT1G26540 protein from Arabidopsis thaliana 0.00071

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  014403
        (425 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2026874 - symbol:AT1G68580 species:3702 "Arabi...   962  8.4e-97   1
TAIR|locus:2162117 - symbol:AT5G55600 species:3702 "Arabi...   554  1.5e-53   1
TAIR|locus:2130878 - symbol:G2484-1 "G2484-1 protein" spe...   163  1.8e-07   2
TAIR|locus:2203018 - symbol:AT1G09320 species:3702 "Arabi...   136  6.3e-06   1
TAIR|locus:2197985 - symbol:AT1G26540 species:3702 "Arabi...   119  0.00071   1


>TAIR|locus:2026874 [details] [associations]
            symbol:AT1G68580 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0006333 "chromatin assembly or
            disassembly" evidence=RCA] InterPro:IPR001025 Pfam:PF01426
            PROSITE:PS51038 SMART:SM00439 INTERPRO:IPR008395 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0003677 Pfam:PF05641
            InterPro:IPR014002 SMART:SM00743 EMBL:AY128327 EMBL:BT008396
            IPI:IPI00516313 RefSeq:NP_177025.2 UniGene:At.47248
            ProteinModelPortal:Q8L7Q0 PaxDb:Q8L7Q0 PRIDE:Q8L7Q0
            EnsemblPlants:AT1G68580.2 GeneID:843187 KEGG:ath:AT1G68580
            TAIR:At1g68580 eggNOG:NOG246853 HOGENOM:HOG000242436
            InParanoid:Q8L7Q0 OMA:DLYEDSK PhylomeDB:Q8L7Q0
            ProtClustDB:CLSN2680593 ArrayExpress:Q8L7Q0 Genevestigator:Q8L7Q0
            Uniprot:Q8L7Q0
        Length = 648

 Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
 Identities = 197/384 (51%), Positives = 251/384 (65%)

Query:    44 QYTKEFLWLGSSWMSRKKRKHYQSFCRNGVKVSVHDFVYVLAEENKRLIAYLEDMYEDSR 103
             Q  K F W+G SW  RK+RKHYQS+ RNGV++SV+DFVYVLAE++KRL+AY+ED+YEDS+
Sbjct:   120 QQIKTFSWMGFSWTCRKRRKHYQSYLRNGVRISVNDFVYVLAEQHKRLVAYIEDLYEDSK 179

Query:   104 GNKMVVVRWFHKIDEVGIFLPHNFNDREIFFSLCLQDLSIECIDGLATVLSPQHFEKFMN 163
             G KMVVVRWFHK +EVG  L  + NDREIFFSL  QD+SIECID LATVLSPQH+EKF+ 
Sbjct:   180 GKKMVVVRWFHKTEEVGSVLSDDDNDREIFFSLNRQDISIECIDYLATVLSPQHYEKFLK 239

Query:   164 EATYPQLQPFICDKQFENDDVKPFDITLVKGYWRQEIIRHLFTFTSPKNCSSSQQPFDGQ 223
                + Q   F C K + +D +KP+DIT ++GYWRQE++R+L   +  K+   +Q P    
Sbjct:   240 VPMHVQTVAFFCQKLYGDDGLKPYDITQLEGYWRQEMLRYL-NVSILKSFEGAQAPGTDP 298

Query:   224 RAEKIVNDVVETRPKKRLRQSKDADV-CDYTNRKEPMDAACMDLKISTKSSXXXXXXXXX 282
               +  +   V  R +KR R S    +   Y            D+K   KSS         
Sbjct:   299 GLKAPLVGCVGIRSRKRRRPSPVGTLNVSYAG----------DMKGDCKSSPDSVLAVTD 348

Query:   283 XXXXXXXXSKKEADPSSQYLKVGSHVEVLSQDSGMRGCWYRASVIKKHKDKVKVRYNDVQ 342
                      K + D SS ++K GS +EVLS+DSG+RGCW++A V+KKHKDKVKV+Y D+Q
Sbjct:   349 ASIF-----KGDEDGSSHHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQ 403

Query:   343 DAADEVNLLEEWVLASRVAAPDQLG-LRVSGRRIVRPSPESHKGRVSWAIDVGTIVDAWW 401
             DA DE   LEEW+L SRVAA D LG LR+ GR++VRP  +  K      I VG  VD WW
Sbjct:   404 DADDESKKLEEWILTSRVAAGDHLGDLRIKGRKVVRPMLKPSKENDVCVIGVGMPVDVWW 463

Query:   402 HDGWWEGIVIQKDSEDKLHVYFPG 425
              DGWWEGIV+Q+ SE+K  VY PG
Sbjct:   464 CDGWWEGIVVQEVSEEKFEVYLPG 487


>TAIR|locus:2162117 [details] [associations]
            symbol:AT5G55600 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] [GO:0000956
            "nuclear-transcribed mRNA catabolic process" evidence=RCA]
            [GO:0006487 "protein N-linked glycosylation" evidence=RCA]
            InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
            INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0003677 Pfam:PF05641
            InterPro:IPR014002 SMART:SM00743 UniGene:At.29433 UniGene:At.6552
            EMBL:AF462815 EMBL:BT001005 IPI:IPI00518132 RefSeq:NP_001119443.1
            RefSeq:NP_001190547.1 RefSeq:NP_200371.2 ProteinModelPortal:Q8W109
            PRIDE:Q8W109 EnsemblPlants:AT5G55600.1 EnsemblPlants:AT5G55600.2
            EnsemblPlants:AT5G55600.3 GeneID:835654 KEGG:ath:AT5G55600
            TAIR:At5g55600 InParanoid:Q8W109 OMA:VPKQELA PhylomeDB:Q8W109
            ProtClustDB:CLSN2690242 ArrayExpress:Q8W109 Genevestigator:Q8W109
            Uniprot:Q8W109
        Length = 663

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 151/433 (34%), Positives = 227/433 (52%)

Query:     7 GSPVLKSSQF-AGRFLGGKEVRLLDGESFKDVQSGTLGQYTKEFLWLGSSWMSRKKRKHY 65
             GSP   S+ F A R    +EVRL             L  ++ E +W G+ WM  K+ KHY
Sbjct:   110 GSPEFPSNGFTAQRAQASEEVRL----------PINLIIHSWEIMWSGAPWMCGKQLKHY 159

Query:    66 QSFCRNGVKVSVHDFVYVLAEENKRLIAYLEDMYEDSRGNKMVVVRWFHKIDEV-GIFLP 124
              SFCRNG  + V  FV+VL++   R +AYLEDMYED RG K V VRWFH   EV G    
Sbjct:   160 PSFCRNGTTIGVQSFVFVLSKGEDRYVAYLEDMYEDKRGLKKVKVRWFHYTKEVKGAVAL 219

Query:   125 HNFNDREIFFSLCLQDLSIECIDGLATVLSPQHFEKFMNEATYPQ---LQPFICDKQFEN 181
              N N +E+F +   Q +S EC+DG ATVL+ +H+E+ +  A++P     +  +C +Q  N
Sbjct:   220 KNPNPKEVFITPHSQVISAECVDGPATVLTREHYEECV--ASFPNSLLARVHMCYRQLRN 277

Query:   182 DDVKPFDITLVKGYWRQEIIRHLFTFTS-PKNCSSS-QQPFDGQRAEKIVNDVVETRPKK 239
               VKPFD++ ++GY  Q I+  L +  + P +C+ + ++  +    E ++    E   KK
Sbjct:   278 SKVKPFDLSKLRGYLDQPIMSCLSSMEAGPVDCAMNIEEDEEWSEGENVMVGA-ERSMKK 336

Query:   240 RLRQSKDADVCDYTNRKEPMDAACMDLKISTKSSXXXXXXXXXXXXXXXXXSKKEADPS- 298
             R R   D  +  Y       +++C  LK++                     +  +  P  
Sbjct:   337 RARIMSDHLLTTY-------ESSCKRLKLNASGKRFPSP------------TNVQKHPCY 377

Query:   299 SQYLKVGSHVEVLSQDSGMRGCWYRASVIKKHKDKVKVRYNDVQDAADEVNLLEEWVLAS 358
             +  +K  + +E L QDSG+RGCW+R +V+   + +VK++Y+D++D  D    LEEWV A 
Sbjct:   378 NGVVKTDAKIEFLCQDSGIRGCWFRCTVLDVSRKQVKLQYDDIEDE-DGYGNLEEWVPAF 436

Query:   359 RVAAPDQLGLRVSGRRIVRPSPESHKGR-----VSWAIDVGTIVDAWWHDGWWEGIVIQK 413
             + A PD+LG+R+S R  +RP+P   K       +  A+D     D WW +G    I   K
Sbjct:   437 KSAMPDKLGIRLSNRPTIRPAPRDVKTAYFDLTIGEAVDAWWN-DGWW-EG--VVIATGK 492

Query:   414 -DSEDKLHVYFPG 425
              D+ED L +Y PG
Sbjct:   493 PDTED-LKIYIPG 504


>TAIR|locus:2130878 [details] [associations]
            symbol:G2484-1 "G2484-1 protein" species:3702
            "Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0000226 "microtubule cytoskeleton organization"
            evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
            evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
            INTERPRO:IPR008395 GO:GO:0009506 EMBL:CP002687 Pfam:PF05641
            InterPro:IPR014002 SMART:SM00743 IPI:IPI00518294 RefSeq:NP_193464.5
            UniGene:At.23026 PRIDE:F4JP43 EnsemblPlants:AT4G17330.1
            GeneID:827445 KEGG:ath:AT4G17330 OMA:VAWFSAK Uniprot:F4JP43
        Length = 2037

 Score = 163 (62.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
 Identities = 44/133 (33%), Positives = 70/133 (52%)

Query:   302 LKVGSHVEVLSQDSGMRGCWYRASVIKKHKDKVKVRYND--VQDAADEVNLLEEWVLASR 359
             +K GS+VEV  ++ G+R  WY A+V+    DK  V ++D  V+   D+   L+EWV    
Sbjct:  1573 IKEGSNVEVFKEEPGLRTAWYSANVLSLEDDKAYVLFSDLSVEQGTDK---LKEWVALK- 1628

Query:   360 VAAPDQLGLRVSGRRIVRPSP-ESHKGRVSWAID-----VGTIVDAWWHDGWWEGIVIQK 413
                 DQ   ++   R V   P E  + R   A+      +G  VD+W HD W EG++ +K
Sbjct:  1629 -GEGDQAP-KIRPARSVTALPYEGTRKRRRAALGDHIWKIGDRVDSWVHDSWLEGVITEK 1686

Query:   414 DSEDK--LHVYFP 424
             + +D+  + V+FP
Sbjct:  1687 NKKDENTVTVHFP 1699

 Score = 43 (20.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query:    86 EENKRLIAYLEDMYEDSRGNKMVVVRWFHKIDEVGIFLPHNFNDREI 132
             EE   + + +ED   D  GN   ++    +++     LP   ND  +
Sbjct:   238 EEKANVESRMEDDCSD--GNVQTIITCSGELNNQSTLLPETSNDENV 282


>TAIR|locus:2203018 [details] [associations]
            symbol:AT1G09320 species:3702 "Arabidopsis thaliana"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            [GO:0009688 "abscisic acid biosynthetic process" evidence=RCA]
            INTERPRO:IPR008395 EMBL:CP002684 GenomeReviews:CT485782_GR
            Pfam:PF05641 InterPro:IPR014002 SMART:SM00743 EMBL:BT022112
            IPI:IPI00538316 RefSeq:NP_172403.3 UniGene:At.42230
            ProteinModelPortal:Q500V5 SMR:Q500V5 EnsemblPlants:AT1G09320.1
            GeneID:837453 KEGG:ath:AT1G09320 TAIR:At1g09320 eggNOG:NOG262633
            HOGENOM:HOG000136721 InParanoid:Q500V5 OMA:AFYNDGW PhylomeDB:Q500V5
            ProtClustDB:CLSN2918468 Genevestigator:Q500V5 Uniprot:Q500V5
        Length = 517

 Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 45/129 (34%), Positives = 59/129 (45%)

Query:   301 YLKVGSHVEVLSQDSGMRGCWYRASVI----KKHKDKVK--VRYNDVQDAADEVNLLEEW 354
             YLK GS VE+ S + G RG WY   VI       KD VK  V Y  +    +    L+E 
Sbjct:    38 YLKPGSAVEISSDEIGFRGSWYMGKVITIPSSSDKDSVKCQVEYTTLFFDKEGTKPLKEV 97

Query:   355 VLASRVAAPDQLGLRVSGRRIVRPSPESHKGRVSWAIDVGTIVDAWWHDGWWEGIVIQKD 414
             V  S++  P              P  E  K +    I VG  VDA+++DGWWEG V +  
Sbjct:    98 VDMSQLRPP------------APPMSEIEKKK---KIVVGEEVDAFYNDGWWEGDVTEVL 142

Query:   415 SEDKLHVYF 423
              + K  V+F
Sbjct:   143 DDGKFSVFF 151

 Score = 93 (37.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
 Identities = 20/57 (35%), Positives = 33/57 (57%)

Query:   298 SSQYLKVGSHVEVLSQDSGMRGCWYRASVIKK-HKDKVKVRYNDVQDAADEVNLLEE 353
             + Q    G+ VEV S + G +GCW+ A V++   +DK  V Y D+++  D +  L+E
Sbjct:   217 AKQMFSSGTVVEVSSDEEGFQGCWFAAKVVEPVGEDKFLVEYRDLREK-DGIEPLKE 272

 Score = 81 (33.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
 Identities = 16/48 (33%), Positives = 28/48 (58%)

Query:   376 VRPSPESHKGRVSWAIDVGTIVDAWWHDGWWEGIVIQKDSEDKLHVYF 423
             +RP P   +  + +A  VG  ++A+++DGWW G+VI       + +YF
Sbjct:   279 IRPPPPRDED-IDFA--VGDKINAFYNDGWWVGVVIDGMKHGTVGIYF 323


>TAIR|locus:2197985 [details] [associations]
            symbol:AT1G26540 species:3702 "Arabidopsis thaliana"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005773 "vacuole" evidence=IDA] [GO:0006306 "DNA methylation"
            evidence=RCA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
            evidence=RCA] [GO:0009616 "virus induced gene silencing"
            evidence=RCA] [GO:0009909 "regulation of flower development"
            evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
            interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
            evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
            evidence=RCA] [GO:0034968 "histone lysine methylation"
            evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=RCA] [GO:0048451 "petal formation"
            evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
            [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
            INTERPRO:IPR008395 EMBL:CP002684 EMBL:AC013427 GO:GO:0005773
            Pfam:PF05641 InterPro:IPR014002 SMART:SM00743 InterPro:IPR007930
            Pfam:PF05266 HOGENOM:HOG000114080 EMBL:AK117551 IPI:IPI00540262
            PIR:D86392 RefSeq:NP_173976.1 UniGene:At.41229
            ProteinModelPortal:Q9FZD9 PRIDE:Q9FZD9 ProMEX:Q9FZD9
            EnsemblPlants:AT1G26540.1 GeneID:839194 KEGG:ath:AT1G26540
            TAIR:At1g26540 InParanoid:Q9FZD9 OMA:WINIPTV PhylomeDB:Q9FZD9
            ProtClustDB:CLSN2679655 Genevestigator:Q9FZD9 Uniprot:Q9FZD9
        Length = 695

 Score = 119 (46.9 bits), Expect = 0.00071, P = 0.00071
 Identities = 33/116 (28%), Positives = 57/116 (49%)

Query:   308 VEVLSQDSGMRGCWYRASVIKKHKDKVKVRYNDVQDAADEVNLLEEWVLASRVAAPDQLG 367
             VEV S++ G  G W+RA V+++         N    +  ++ +    +L    ++P  L 
Sbjct:    14 VEVSSEEEGFEGAWFRA-VLEE---------NPGNSSRRKLRVRYSTLLDMDGSSP--LI 61

Query:   368 LRVSGRRIVRPSPESHKGRVSWAIDVGTIVDAWWHDGWWEGIVIQKDSEDKLHVYF 423
               +  +R +RP P     +    ++ G +VDA   DGWW G+V++K  +D   VYF
Sbjct:    62 EHIE-QRFIRPVPPEENQQKDVVLEEGLLVDADHKDGWWTGVVVKKMEDDNYLVYF 116


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      425       408   0.00079  118 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  629 (67 KB)
  Total size of DFA:  302 KB (2155 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.23u 0.13s 32.36t   Elapsed:  00:00:01
  Total cpu time:  32.23u 0.13s 32.36t   Elapsed:  00:00:01
  Start:  Tue May 21 09:29:07 2013   End:  Tue May 21 09:29:08 2013

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