Query 014404
Match_columns 425
No_of_seqs 253 out of 1921
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 10:58:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014404.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014404hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dva_I Dihydrolipoyllysine-res 100.0 2.8E-94 9.5E-99 730.3 1.3 410 1-425 7-426 (428)
2 1scz_A E2, dihydrolipoamide su 100.0 3.6E-62 1.2E-66 457.7 18.9 227 196-425 5-231 (233)
3 3mae_A 2-oxoisovalerate dehydr 100.0 1E-61 3.5E-66 459.1 20.2 228 194-424 17-244 (256)
4 1dpb_A Dihydrolipoyl-transacet 100.0 8.8E-61 3E-65 451.1 22.6 227 195-425 15-243 (243)
5 3l60_A Branched-chain alpha-ke 100.0 8.3E-61 2.8E-65 451.3 19.8 218 199-424 18-239 (250)
6 3b8k_A PDCE2;, dihydrolipoylly 100.0 6.2E-61 2.1E-65 451.6 15.4 229 194-425 11-239 (239)
7 2ii3_A Lipoamide acyltransfera 100.0 5.9E-60 2E-64 449.2 20.3 228 194-425 30-259 (262)
8 3rqc_A Probable lipoamide acyl 100.0 1.5E-59 5.1E-64 437.5 21.4 215 195-425 6-222 (224)
9 2xt6_A 2-oxoglutarate decarbox 100.0 8.7E-47 3E-51 419.0 16.6 212 210-423 1-225 (1113)
10 1q23_A Chloramphenicol acetylt 100.0 1.6E-44 5.5E-49 335.0 23.7 185 214-421 26-216 (219)
11 3cla_A Type III chloramphenico 100.0 6.5E-44 2.2E-48 329.8 22.5 182 216-419 23-210 (213)
12 2i9d_A Chloramphenicol acetylt 100.0 2.8E-42 9.5E-47 319.2 21.3 181 215-417 24-216 (217)
13 1zy8_K Pyruvate dehydrogenase 100.0 6.4E-31 2.2E-35 244.3 4.5 161 1-173 8-169 (229)
14 1y8o_B Dihydrolipoyllysine-res 99.7 5.4E-18 1.8E-22 143.0 11.3 77 1-78 32-109 (128)
15 2dne_A Dihydrolipoyllysine-res 99.7 2.5E-18 8.6E-23 141.3 8.3 77 1-78 12-89 (108)
16 3crk_C Dihydrolipoyllysine-res 99.7 1.1E-17 3.8E-22 132.3 10.5 74 1-75 10-84 (87)
17 2dnc_A Pyruvate dehydrogenase 99.7 1.3E-17 4.5E-22 134.7 9.2 74 1-75 12-86 (98)
18 1k8m_A E2 component of branche 99.7 3.1E-17 1.1E-21 131.2 9.1 72 1-73 9-80 (93)
19 1ghj_A E2, E2, the dihydrolipo 99.7 1E-16 3.6E-21 124.3 8.0 72 1-73 6-77 (79)
20 2l5t_A Lipoamide acyltransfera 99.6 9.9E-16 3.4E-20 118.1 7.6 71 1-72 6-76 (77)
21 1pmr_A Dihydrolipoyl succinylt 99.6 3.7E-17 1.3E-21 127.2 -1.0 71 1-72 7-77 (80)
22 1qjo_A Dihydrolipoamide acetyl 99.6 2E-15 6.8E-20 117.2 7.8 70 1-73 7-76 (80)
23 1iyu_A E2P, dihydrolipoamide a 99.6 8E-15 2.7E-19 113.6 9.2 69 1-73 6-74 (79)
24 1gjx_A Pyruvate dehydrogenase; 99.5 4.5E-15 1.5E-19 115.5 4.5 71 1-73 7-77 (81)
25 1z6h_A Biotin/lipoyl attachmen 99.4 1.6E-12 5.3E-17 98.5 9.0 64 9-73 6-69 (72)
26 2kcc_A Acetyl-COA carboxylase 99.4 5.2E-13 1.8E-17 104.5 5.8 65 8-74 11-75 (84)
27 2k7v_A Dihydrolipoyllysine-res 99.4 1.1E-13 3.8E-18 108.7 1.1 63 11-74 11-73 (85)
28 2eq9_C Pyruvate dehydrogenase 99.3 8.9E-13 3.1E-17 88.6 3.7 40 133-172 1-40 (41)
29 3rnm_E Lipoamide acyltransfera 99.3 7.1E-13 2.4E-17 95.2 3.4 43 131-173 6-48 (58)
30 2dn8_A Acetyl-COA carboxylase 99.3 4.7E-12 1.6E-16 102.4 8.6 63 9-73 24-86 (100)
31 2eq8_C Pyruvate dehydrogenase 99.3 2.1E-12 7.1E-17 86.3 3.7 37 135-171 2-38 (40)
32 2eq7_C 2-oxoglutarate dehydrog 99.3 1.4E-12 4.8E-17 87.1 2.2 37 135-171 2-38 (40)
33 2d5d_A Methylmalonyl-COA decar 99.3 2.3E-11 8E-16 92.4 9.3 62 9-71 12-73 (74)
34 2jku_A Propionyl-COA carboxyla 99.2 2.4E-12 8.1E-17 103.0 3.2 62 9-71 32-93 (94)
35 1dcz_A Transcarboxylase 1.3S s 99.2 2.5E-11 8.6E-16 93.1 8.5 62 9-71 15-76 (77)
36 1bdo_A Acetyl-COA carboxylase; 99.2 1.7E-11 5.7E-16 94.9 7.4 61 10-71 12-79 (80)
37 2ejm_A Methylcrotonoyl-COA car 99.2 2.9E-11 9.7E-16 97.6 8.9 65 9-74 21-85 (99)
38 1w85_I Dihydrolipoyllysine-res 99.2 4.8E-12 1.7E-16 88.3 3.3 41 132-172 6-46 (49)
39 1bal_A Dihydrolipoamide succin 99.2 3.8E-12 1.3E-16 89.6 2.4 41 132-172 9-49 (51)
40 2f60_K Pyruvate dehydrogenase 99.1 1.5E-11 5.3E-16 90.3 2.5 42 132-173 9-50 (64)
41 2coo_A Lipoamide acyltransfera 99.1 6.6E-11 2.3E-15 88.5 5.6 43 132-174 15-57 (70)
42 3n6r_A Propionyl-COA carboxyla 99.1 8.8E-11 3E-15 125.7 9.0 61 10-71 620-680 (681)
43 1w4i_A Pyruvate dehydrogenase 99.1 3.4E-11 1.2E-15 88.1 3.8 43 132-174 4-46 (62)
44 3va7_A KLLA0E08119P; carboxyla 99.1 1.2E-10 4.3E-15 131.2 9.0 61 10-71 1175-1235(1236)
45 3hbl_A Pyruvate carboxylase; T 99.0 2.6E-10 9E-15 128.2 8.8 63 10-73 1085-1147(1150)
46 3u9t_A MCC alpha, methylcroton 99.0 2.7E-11 9.2E-16 129.6 0.0 63 10-73 610-672 (675)
47 2k32_A A; NMR {Campylobacter j 98.8 4E-09 1.4E-13 87.3 5.5 66 9-75 8-103 (116)
48 1zko_A Glycine cleavage system 98.8 4.9E-09 1.7E-13 88.9 5.8 62 11-73 45-114 (136)
49 3bg3_A Pyruvate carboxylase, m 98.8 1.8E-09 6.2E-14 115.2 3.5 61 10-71 657-717 (718)
50 2qf7_A Pyruvate carboxylase pr 98.7 6.2E-09 2.1E-13 117.3 5.5 61 10-71 1103-1163(1165)
51 1hpc_A H protein of the glycin 98.4 2E-07 6.9E-12 78.5 5.3 48 11-58 36-84 (131)
52 3a7l_A H-protein, glycine clea 98.4 2.9E-07 9.9E-12 77.2 5.4 48 11-58 37-85 (128)
53 1onl_A Glycine cleavage system 98.4 3.4E-07 1.2E-11 76.8 5.7 61 11-72 36-104 (128)
54 3klr_A Glycine cleavage system 98.0 1.1E-05 3.9E-10 66.9 6.3 46 11-56 32-78 (125)
55 3ne5_B Cation efflux system pr 97.9 1.7E-05 5.8E-10 79.9 7.5 65 9-74 128-241 (413)
56 3mxu_A Glycine cleavage system 97.8 2.3E-05 8E-10 66.3 6.3 46 11-56 54-100 (143)
57 3lnn_A Membrane fusion protein 97.8 1.9E-05 6.3E-10 77.8 6.5 65 9-74 64-205 (359)
58 3tzu_A GCVH, glycine cleavage 97.8 2.5E-05 8.6E-10 65.8 5.7 44 11-54 49-93 (137)
59 2f1m_A Acriflavine resistance 97.8 6.5E-06 2.2E-10 78.1 2.4 65 9-74 29-166 (277)
60 3fpp_A Macrolide-specific effl 97.8 2.1E-05 7.2E-10 76.8 5.7 65 9-74 38-190 (341)
61 3hgb_A Glycine cleavage system 97.6 9.7E-05 3.3E-09 63.3 6.3 44 11-54 59-103 (155)
62 1vf7_A Multidrug resistance pr 97.5 3.4E-05 1.1E-09 76.4 2.4 65 9-74 50-173 (369)
63 4dk0_A Putative MACA; alpha-ha 96.9 3.9E-05 1.3E-09 75.7 -3.7 64 9-73 39-190 (369)
64 3na6_A Succinylglutamate desuc 96.5 0.0061 2.1E-07 59.3 8.5 58 13-73 267-328 (331)
65 3cdx_A Succinylglutamatedesucc 96.3 0.0098 3.3E-07 58.3 8.7 59 13-74 277-339 (354)
66 3fmc_A Putative succinylglutam 96.3 0.01 3.6E-07 58.5 8.7 58 13-73 300-363 (368)
67 2dn8_A Acetyl-COA carboxylase 96.3 0.002 6.8E-08 51.3 2.8 46 27-73 5-50 (100)
68 1z6h_A Biotin/lipoyl attachmen 95.3 0.016 5.3E-07 42.6 4.2 32 41-73 1-32 (72)
69 1dcz_A Transcarboxylase 1.3S s 95.3 0.019 6.6E-07 42.7 4.6 34 39-73 8-41 (77)
70 2d5d_A Methylmalonyl-COA decar 95.2 0.024 8.4E-07 41.7 4.7 33 40-73 6-38 (74)
71 1f3z_A EIIA-GLC, glucose-speci 95.0 0.021 7.2E-07 49.3 4.6 58 9-71 19-115 (161)
72 2k32_A A; NMR {Campylobacter j 94.7 0.029 9.9E-07 45.5 4.5 33 40-73 2-34 (116)
73 2qj8_A MLR6093 protein; struct 94.6 0.1 3.4E-06 50.5 8.9 59 12-73 266-328 (332)
74 2kcc_A Acetyl-COA carboxylase 94.5 0.025 8.6E-07 43.2 3.5 33 40-73 6-38 (84)
75 2gpr_A Glucose-permease IIA co 94.4 0.03 1E-06 48.0 4.0 58 9-71 14-110 (154)
76 1ax3_A Iiaglc, glucose permeas 93.9 0.031 1.1E-06 48.4 3.0 58 9-71 19-115 (162)
77 2xha_A NUSG, transcription ant 93.8 0.055 1.9E-06 47.8 4.6 32 15-52 22-53 (193)
78 2ejm_A Methylcrotonoyl-COA car 93.0 0.087 3E-06 41.5 4.1 34 39-73 14-47 (99)
79 2f1m_A Acriflavine resistance 92.7 0.1 3.5E-06 48.7 4.8 52 19-72 3-54 (277)
80 3d4r_A Domain of unknown funct 92.5 0.16 5.5E-06 43.5 5.2 45 10-54 108-153 (169)
81 2l5t_A Lipoamide acyltransfera 92.4 0.12 4.1E-06 38.4 4.0 27 9-35 51-77 (77)
82 2jku_A Propionyl-COA carboxyla 92.4 0.057 1.9E-06 42.2 2.2 34 39-73 25-58 (94)
83 1bdo_A Acetyl-COA carboxylase; 91.8 0.1 3.4E-06 39.1 2.9 33 40-73 5-44 (80)
84 2xhc_A Transcription antitermi 90.7 0.22 7.6E-06 48.4 4.9 32 15-52 62-93 (352)
85 3lnn_A Membrane fusion protein 90.7 0.26 8.8E-06 47.8 5.3 53 20-73 37-90 (359)
86 1ghj_A E2, E2, the dihydrolipo 90.5 0.21 7.3E-06 37.2 3.6 27 9-35 51-77 (79)
87 3fpp_A Macrolide-specific effl 90.4 0.25 8.5E-06 47.5 5.0 55 17-73 10-64 (341)
88 1qjo_A Dihydrolipoamide acetyl 90.1 0.18 6E-06 37.7 2.8 28 9-36 50-77 (80)
89 3crk_C Dihydrolipoyllysine-res 89.7 0.24 8.2E-06 37.8 3.3 29 9-37 55-84 (87)
90 1k8m_A E2 component of branche 89.5 0.32 1.1E-05 37.7 4.0 28 9-36 54-81 (93)
91 1iyu_A E2P, dihydrolipoamide a 89.3 0.26 9.1E-06 36.7 3.3 27 10-36 49-75 (79)
92 1vf7_A Multidrug resistance pr 88.2 0.33 1.1E-05 47.4 4.0 54 18-73 23-76 (369)
93 2auk_A DNA-directed RNA polyme 87.6 0.52 1.8E-05 41.7 4.5 42 15-58 63-104 (190)
94 3ne5_B Cation efflux system pr 87.5 0.48 1.7E-05 47.1 4.8 44 28-72 109-154 (413)
95 1gjx_A Pyruvate dehydrogenase; 87.2 0.33 1.1E-05 36.3 2.6 30 43-73 11-40 (81)
96 1y8o_B Dihydrolipoyllysine-res 86.3 0.55 1.9E-05 38.8 3.7 28 9-36 77-105 (128)
97 2k7v_A Dihydrolipoyllysine-res 86.2 0.28 9.7E-06 37.2 1.8 28 9-36 46-73 (85)
98 2dnc_A Pyruvate dehydrogenase 85.8 0.48 1.6E-05 37.1 2.9 29 9-37 57-86 (98)
99 2dne_A Dihydrolipoyllysine-res 84.7 0.59 2E-05 37.3 3.1 27 9-35 57-84 (108)
100 2xha_A NUSG, transcription ant 84.2 0.25 8.5E-06 43.7 0.6 45 18-69 85-157 (193)
101 4dk0_A Putative MACA; alpha-ha 82.9 0.29 9.9E-06 47.6 0.5 54 18-73 12-65 (369)
102 3our_B EIIA, phosphotransferas 80.8 2.5 8.5E-05 36.9 5.7 41 27-71 62-137 (183)
103 3n6r_A Propionyl-COA carboxyla 80.7 1.3 4.3E-05 47.1 4.5 34 39-73 612-645 (681)
104 1pmr_A Dihydrolipoyl succinylt 79.1 0.26 8.8E-06 36.9 -1.0 27 9-35 52-78 (80)
105 2gpr_A Glucose-permease IIA co 78.3 1.3 4.5E-05 37.7 3.0 22 15-36 92-113 (154)
106 3fot_A 15-O-acetyltransferase; 76.3 18 0.0006 36.9 11.4 31 389-419 486-516 (519)
107 3hbl_A Pyruvate carboxylase; T 73.6 2.5 8.6E-05 47.6 4.6 33 40-73 1078-1110(1150)
108 3va7_A KLLA0E08119P; carboxyla 72.8 2.6 8.8E-05 47.8 4.4 34 39-73 1167-1200(1236)
109 2bco_A Succinylglutamate desuc 72.3 2.7 9.4E-05 40.7 4.0 49 17-73 280-328 (350)
110 3lu0_D DNA-directed RNA polyme 71.3 2.9 9.8E-05 47.1 4.2 35 15-51 1002-1036(1407)
111 3bg3_A Pyruvate carboxylase, m 70.8 2.1 7.2E-05 45.6 3.0 33 40-73 650-682 (718)
112 3our_B EIIA, phosphotransferas 69.7 2.6 9E-05 36.8 2.8 26 12-37 116-141 (183)
113 3u9t_A MCC alpha, methylcroton 66.0 1.2 4.3E-05 47.1 0.0 32 40-72 603-634 (675)
114 2qf7_A Pyruvate carboxylase pr 65.2 4 0.00014 46.1 3.9 33 40-73 1096-1128(1165)
115 3dva_I Dihydrolipoyllysine-res 64.6 1.4 4.7E-05 44.1 0.0 29 9-37 52-80 (428)
116 2xhc_A Transcription antitermi 62.2 3.4 0.00012 40.1 2.3 28 18-51 125-152 (352)
117 4hvm_A Tlmii; PSI-biology, mid 62.1 87 0.003 30.8 13.0 28 391-418 135-162 (493)
118 1f3z_A EIIA-GLC, glucose-speci 60.0 5.2 0.00018 34.2 2.8 22 15-36 97-118 (161)
119 2bgh_A Vinorine synthase; VS, 58.7 7.4 0.00025 38.3 4.2 29 390-418 152-180 (421)
120 2xr7_A Malonyltransferase; xen 58.2 7.3 0.00025 38.7 4.0 29 390-418 157-185 (453)
121 2e1v_A Acyl transferase; BAHD 58.0 8.2 0.00028 38.4 4.4 29 390-418 162-190 (454)
122 2rkv_A Trichothecene 3-O-acety 57.4 8 0.00027 38.3 4.2 30 390-419 148-177 (451)
123 1brw_A PYNP, protein (pyrimidi 57.3 12 0.00041 37.2 5.4 43 33-76 329-402 (433)
124 1qpo_A Quinolinate acid phosph 56.7 7.8 0.00027 36.3 3.7 23 13-35 72-94 (284)
125 2dsj_A Pyrimidine-nucleoside ( 56.2 11 0.00039 37.3 4.9 42 33-76 322-394 (423)
126 3h5q_A PYNP, pyrimidine-nucleo 56.1 13 0.00043 37.1 5.3 37 35-72 334-401 (436)
127 3tqv_A Nicotinate-nucleotide p 55.4 7.3 0.00025 36.6 3.2 22 14-35 77-98 (287)
128 1l5a_A Amide synthase, VIBH; n 55.0 1.4E+02 0.0047 28.5 12.8 112 254-418 35-146 (436)
129 1zy8_K Pyruvate dehydrogenase 55.0 2.5 8.7E-05 38.4 0.0 27 9-35 53-80 (229)
130 4g22_A Hydroxycinnamoyl-COA sh 54.8 9.9 0.00034 37.6 4.4 30 390-419 150-179 (439)
131 3l0g_A Nicotinate-nucleotide p 54.4 7.9 0.00027 36.5 3.3 22 14-35 86-107 (300)
132 1x1o_A Nicotinate-nucleotide p 54.2 7.7 0.00026 36.4 3.2 22 14-35 74-95 (286)
133 1ax3_A Iiaglc, glucose permeas 53.9 5 0.00017 34.4 1.7 24 14-37 96-119 (162)
134 2b7n_A Probable nicotinate-nuc 52.8 10 0.00035 35.2 3.8 20 15-34 61-80 (273)
135 3gnn_A Nicotinate-nucleotide p 52.7 8.4 0.00029 36.3 3.2 22 14-35 88-109 (298)
136 3fmc_A Putative succinylglutam 52.6 9.5 0.00032 37.1 3.7 33 39-73 290-322 (368)
137 1o4u_A Type II quinolic acid p 52.5 7.1 0.00024 36.6 2.6 22 14-35 73-94 (285)
138 3paj_A Nicotinate-nucleotide p 51.3 9.1 0.00031 36.5 3.2 22 14-35 110-131 (320)
139 3it5_A Protease LASA; metallop 50.0 5.9 0.0002 34.6 1.6 19 16-34 85-103 (182)
140 1qap_A Quinolinic acid phospho 49.6 10 0.00036 35.7 3.3 22 14-35 87-108 (296)
141 2tpt_A Thymidine phosphorylase 48.5 12 0.00042 37.3 3.8 41 34-75 335-406 (440)
142 3na6_A Succinylglutamate desuc 46.5 14 0.00048 35.2 3.8 35 38-74 256-290 (331)
143 2dsj_A Pyrimidine-nucleoside ( 44.4 14 0.00049 36.6 3.5 31 7-37 363-393 (423)
144 1brw_A PYNP, protein (pyrimidi 44.4 14 0.0005 36.7 3.6 31 7-37 371-401 (433)
145 2jbm_A Nicotinate-nucleotide p 44.0 12 0.00041 35.3 2.8 20 15-34 74-93 (299)
146 3h5q_A PYNP, pyrimidine-nucleo 43.8 12 0.00041 37.3 2.8 31 7-37 374-404 (436)
147 3tuf_B Stage II sporulation pr 43.3 11 0.00037 34.6 2.3 26 11-36 130-155 (245)
148 2hsi_A Putative peptidase M23; 42.5 12 0.00039 35.1 2.4 19 15-33 231-249 (282)
149 1uou_A Thymidine phosphorylase 42.2 17 0.00058 36.6 3.7 28 10-37 409-436 (474)
150 1qwy_A Peptidoglycan hydrolase 41.9 12 0.00041 35.1 2.4 20 53-73 239-258 (291)
151 1uou_A Thymidine phosphorylase 41.5 32 0.0011 34.5 5.6 42 33-75 366-436 (474)
152 3nyy_A Putative glycyl-glycine 36.6 16 0.00054 33.6 2.3 17 55-72 184-200 (252)
153 1q9j_A PAPA5, polyketide synth 36.0 2.8E+02 0.0095 26.0 13.9 67 249-325 233-314 (422)
154 4etm_A LMPTP, low molecular we 34.7 21 0.00073 30.6 2.7 32 135-170 68-99 (173)
155 3cdx_A Succinylglutamatedesucc 33.7 38 0.0013 32.5 4.6 35 37-73 265-299 (354)
156 3it5_A Protease LASA; metallop 33.5 42 0.0014 29.0 4.4 22 51-73 83-104 (182)
157 2tpt_A Thymidine phosphorylase 31.4 18 0.00063 36.0 1.9 31 7-37 376-406 (440)
158 1zko_A Glycine cleavage system 31.3 52 0.0018 27.1 4.4 31 42-73 39-70 (136)
159 2gu1_A Zinc peptidase; alpha/b 30.6 23 0.00077 34.2 2.4 17 55-72 286-302 (361)
160 1hpc_A H protein of the glycin 30.2 36 0.0012 27.8 3.2 29 44-73 32-61 (131)
161 1jf8_A Arsenate reductase; ptp 30.2 28 0.00097 28.2 2.6 32 135-170 44-75 (131)
162 3c2e_A Nicotinate-nucleotide p 29.8 23 0.00078 33.2 2.2 9 363-371 271-279 (294)
163 3d4r_A Domain of unknown funct 29.7 53 0.0018 28.0 4.1 43 23-77 95-137 (169)
164 3csq_A Morphogenesis protein 1 28.3 16 0.00054 35.0 0.8 21 15-35 250-270 (334)
165 2lmc_B DNA-directed RNA polyme 28.2 6.5 0.00022 29.7 -1.5 16 16-31 67-82 (84)
166 2vsq_A Surfactin synthetase su 28.0 6.7E+02 0.023 28.1 14.4 142 250-418 251-426 (1304)
167 1q9j_A PAPA5, polyketide synth 27.1 41 0.0014 32.1 3.6 28 391-418 117-144 (422)
168 3rh0_A Arsenate reductase; oxi 26.7 37 0.0013 28.3 2.7 32 135-170 62-93 (148)
169 3tuf_B Stage II sporulation pr 26.5 51 0.0017 30.0 3.8 24 50-74 132-155 (245)
170 3lu0_D DNA-directed RNA polyme 25.6 13 0.00044 42.0 -0.4 36 16-51 1107-1164(1407)
171 2gi4_A Possible phosphotyrosin 24.9 27 0.00091 29.4 1.5 31 135-169 51-81 (156)
172 2cwd_A Low molecular weight ph 24.9 36 0.0012 28.6 2.4 31 135-170 54-84 (161)
173 2qj8_A MLR6093 protein; struct 24.7 58 0.002 30.8 4.1 33 39-73 257-289 (332)
174 2fek_A Low molecular weight pr 24.5 43 0.0015 28.5 2.8 32 135-170 65-96 (167)
175 3mfy_A V-type ATP synthase alp 24.4 1.3E+02 0.0044 31.0 6.7 54 17-73 123-179 (588)
176 2kng_A Protein LSR2; DNA-bindi 24.3 79 0.0027 21.7 3.5 32 136-173 15-46 (55)
177 1yw4_A Succinylglutamate desuc 23.0 17 0.00057 34.9 -0.2 36 17-52 278-318 (341)
178 3vr4_A V-type sodium ATPase ca 22.9 1.2E+02 0.004 31.4 6.0 53 17-73 130-185 (600)
179 2l17_A Synarsc, arsenate reduc 22.9 30 0.001 28.1 1.4 31 135-169 45-75 (134)
180 3twe_A Alpha4H; unknown functi 22.8 85 0.0029 17.5 2.7 18 311-328 10-27 (27)
181 1p8a_A Protein tyrosine phosph 21.8 35 0.0012 28.1 1.7 31 135-169 49-79 (146)
182 3fot_A 15-O-acetyltransferase; 21.2 84 0.0029 31.9 4.6 32 389-420 177-208 (519)
183 2wmy_A WZB, putative acid phos 21.0 38 0.0013 28.2 1.7 30 135-168 51-80 (150)
184 3qoq_A Alginate and motility r 20.8 2.4E+02 0.0081 20.2 5.9 44 215-267 16-59 (69)
185 1jl3_A Arsenate reductase; alp 20.7 39 0.0013 27.6 1.7 31 135-169 44-74 (139)
186 2gu1_A Zinc peptidase; alpha/b 20.3 81 0.0028 30.2 4.1 15 40-54 243-257 (361)
No 1
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=100.00 E-value=2.8e-94 Score=730.28 Aligned_cols=410 Identities=32% Similarity=0.520 Sum_probs=39.7
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEecccccccc
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEEEDIPK 80 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~~~~~~~~ 80 (425)
||+||++|+||+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++| +.|.+|++|+++.+.+++...
T Consensus 7 mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G-~~V~~G~~l~~i~~~~~~~~~ 85 (428)
T 3dva_I 7 LPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEG-TVATVGQTLITLDAPGYENMT 85 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCccEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCC-CEeCCCCEEEEEecCCccccc
Confidence 8999999999999999999999999999999999999999999999999999999999 799999999998655443221
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCC-CCCCCCCCCCCcccChhHHhHHHHcCCCCCccccCCCC
Q 014404 81 FKDYSPSVSDAGAAPAKEPSPPPPPKQEEVEKPISTSEPKA-SKPSAASPEDRLFASPVARNLAEEHNVSLSSIKGTGPN 159 (425)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~asP~aR~lA~e~gIdl~~v~gtG~~ 159 (425)
... . ..+.++.+ +.+.. .+.. .+...+.+.. ........+.++++||+||+||+|+||||++|+|||++
T Consensus 86 ~~~---~--~~~~~~~~--~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~asP~~R~lA~e~gvdl~~v~gtG~~ 155 (428)
T 3dva_I 86 FKG---Q--EQEEAKKE--EKTET-VSKE--EKVDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKN 155 (428)
T ss_dssp ----------------------------------------------------CCCCCHHHHHHHHHTTCCGGGSCCCSTT
T ss_pred ccc---c--cccccccC--CCccc-CCcc--ccccCCCccccccccccccccccccCHHHHHHHHHcCCCHHHCCCCCCC
Confidence 100 0 00000000 00000 0000 0000000000 00011112346789999999999999999999999999
Q ss_pred CccchhhHHHHHHhcCCCCCCCC-------CCCCCCCCCCCCccccccchhhhhhhhhccccccCccEEEEeeeeeHHHH
Q 014404 160 GLIVKADIEDYLASRGKEVPAKA-------PKGKDVAAPALDYVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNL 232 (425)
Q Consensus 160 GrI~~~DV~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~s~~rk~~a~~m~~s~~~iP~~~~~~~iDvt~l 232 (425)
|||+++||++|++......++.. +..+.........+++|+++|||.|+++|.+||+++||||++.++|+|+|
T Consensus 156 GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~Rk~ia~~m~~S~~~~P~~~~~~evDvt~l 235 (428)
T 3dva_I 156 GRVLKEDIDAFLAGGAKPAPAAAEEKAAPAAAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHVTLMDEADVTKL 235 (428)
T ss_dssp SCCCTTTTTTTSCC------------------------------------------------------------------
T ss_pred CceeHHHHHHHhhccccccccccccccccCCCCccccccCCccccccCcHHHHHHHHHHHHhcccCCeEEEEEEEeHHHH
Confidence 99999999999753321111000 00000000111356789999999999999999999999999999999999
Q ss_pred HHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCceecC--CceeeeCccceEEEeecCCCeEEEEEecCCCCC
Q 014404 233 MGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWAD--EYIRQFKNVNINVAVQTENGLYVPVIRDADKKG 310 (425)
Q Consensus 233 ~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~~~~~--~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~s 310 (425)
+++|++++...+ +.|.|+||++|++||+++||++||+||++|++ ++|++|+++|||+||++++||++|||++++++|
T Consensus 236 ~~~rk~~~~~~~-~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~s 314 (428)
T 3dva_I 236 VAHRKKFKAIAA-EKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKP 314 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhhhhHh-hcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCccCeEEEEEcCCceEEeeeccCCCCC
Confidence 999999986433 35889999999999999999999999999987 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCCccceeeeeCCCCeeEEeeccceEEeeecCCCCceeEEeEE
Q 014404 311 LSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFM 390 (425)
Q Consensus 311 l~ei~~~~~~l~~~a~~~~l~~~d~~~~t~tISnlg~~~g~~~~~pii~~p~~ail~vG~i~~~~v~~~~~g~~~~r~~m 390 (425)
|.+|+++++++.+++|+|+|+++|+++|||||||+|| ||+++|+||||+||+|||++|++.++|++ .+|++++|++|
T Consensus 315 l~eia~~~~~l~~~ar~gkL~~~e~~ggtftISnlG~-~G~~~ftpIin~pq~aIl~vG~i~~~pv~--~~g~i~~r~~m 391 (428)
T 3dva_I 315 IFALAQEINELAEKARDGKLTPGEMKGASCTITNIGS-AGGQWFTPVINHPEVAILGIGRIAEKPIV--RDGEIVAAPML 391 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCC-CCccceEeecCCCCceEEEccccEEEEEE--ECCEEEEeeeE
Confidence 9999999999999999999999999999999999999 99999999999999999999999999998 47899999999
Q ss_pred EEEEEecccccchHHHHHHHHHHHHHhcCcccccC
Q 014404 391 SVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 425 (425)
Q Consensus 391 ~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 425 (425)
+|||+||||+|||+|+++||+.|+++||+|+.||+
T Consensus 392 ~lsls~DHRviDG~~aa~Fl~~lk~~Le~P~~lll 426 (428)
T 3dva_I 392 ALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM 426 (428)
T ss_dssp -----------------------------------
T ss_pred EEEEEecccccchHHHHHHHHHHHHHHhCHHHHhh
Confidence 99999999999999999999999999999999875
No 2
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=100.00 E-value=3.6e-62 Score=457.74 Aligned_cols=227 Identities=33% Similarity=0.520 Sum_probs=217.8
Q ss_pred cccccchhhhhhhhhccccccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCcee
Q 014404 196 VDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSW 275 (425)
Q Consensus 196 ~~~~~s~~rk~~a~~m~~s~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~~~ 275 (425)
+++|++++||.||++|.+|++++||||++.++|+|+|+++|+++|+....+.|.++||++|++||+++||++||+||++|
T Consensus 5 ~~~~~~~~r~~ia~~m~~S~~~~P~~~~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~~ 84 (233)
T 1scz_A 5 KRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASI 84 (233)
T ss_dssp CCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTTTTCEE
T ss_pred eeccCCHHHHHHHHHHHHhccCCCEEEEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHhhEEE
Confidence 45799999999999999999999999999999999999999999875544568899999999999999999999999999
Q ss_pred cCCceeeeCccceEEEeecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCCcccee
Q 014404 276 ADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFC 355 (425)
Q Consensus 276 ~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~~l~~~d~~~~t~tISnlg~~~g~~~~~ 355 (425)
+++.+++|+++|||+||++++||++|||++++++||.+|+++++++++++|+|+|+++|++||||||||+|| +|+.+|+
T Consensus 85 ~~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~-~G~~~~t 163 (233)
T 1scz_A 85 DGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGV-FGSLMST 163 (233)
T ss_dssp ETTEEECCSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSCCSEEEEEGGG-GTCCCCC
T ss_pred eCCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEeCCC-CCccceE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred eeeCCCCeeEEeeccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcCcccccC
Q 014404 356 AIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 425 (425)
Q Consensus 356 pii~~p~~ail~vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 425 (425)
|||||||+|||++|++.++|++. +|++++|++|||||+||||+|||+++|+||+.|+++||+|+.||+
T Consensus 164 pIin~pq~aIl~vG~~~~~pv~~--~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 231 (233)
T 1scz_A 164 PIINPPQSAILGMHAIKDRPMAV--NGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 231 (233)
T ss_dssp CCCCTTCSEEEEEEEEEEEEEEE--TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred cccCCCCcEEEEccccEEEEEEE--CCEEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHHHhh
Confidence 99999999999999999999984 789999999999999999999999999999999999999998763
No 3
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=100.00 E-value=1e-61 Score=459.05 Aligned_cols=228 Identities=37% Similarity=0.571 Sum_probs=219.0
Q ss_pred CccccccchhhhhhhhhccccccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCc
Q 014404 194 DYVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNS 273 (425)
Q Consensus 194 ~~~~~~~s~~rk~~a~~m~~s~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~ 273 (425)
..+++|++++||.||++|.+|++++||||++.++|+|+|+++|+++|+.++.+.|.|+||++|++||+++||++||+||+
T Consensus 17 ~~~~~pl~~~rk~ia~~m~~S~~~iP~~t~~~evDvt~l~~~r~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na 96 (256)
T 3mae_A 17 GDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNS 96 (256)
T ss_dssp SCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCTTTSE
T ss_pred CceEEeCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhCHHhhh
Confidence 45688999999999999999999999999999999999999999998765555688999999999999999999999999
Q ss_pred eecCCceeeeCccceEEEeecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCCccc
Q 014404 274 SWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQ 353 (425)
Q Consensus 274 ~~~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~~l~~~d~~~~t~tISnlg~~~g~~~ 353 (425)
+|+++.+++++++|||+||++++||++|||++++++||.+|+++++++++++|+|+|.++|++||||||||+|| +|+.+
T Consensus 97 ~~~~~~i~~~~~vnigiAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~-~G~~~ 175 (256)
T 3mae_A 97 TWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGS-FGSVQ 175 (256)
T ss_dssp EEETTEEEECSSCCEEECCCCTTSCCCCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCHHHHSCCSEEEECGGG-GTCSE
T ss_pred EEecCEEEEcCcEEEEeEEEcCCceEEEEEcCCCCCCHHHHHHHHHHHHHHHhcCCCCchhcCCCEEEEecCCC-CCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred eeeeeCCCCeeEEeeccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcCccccc
Q 014404 354 FCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESML 424 (425)
Q Consensus 354 ~~pii~~p~~ail~vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll 424 (425)
|+||||+||+|||++|++.++|++. +|++++|++|+|||+||||+|||+++++||+.|+++||+|+.|.
T Consensus 176 ftpIInppq~aIL~vG~i~~~pv~~--~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~~~ 244 (256)
T 3mae_A 176 SMGIINHPQAAILQVESIVKRPVII--DDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKEN 244 (256)
T ss_dssp EECCCCTTSSEEEEEEEEEEEEEEE--TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHTCCTTT
T ss_pred eEcccCCCCceEEEecccEEEEEEE--CCEEEEeEEEEEEEEEccccccHHHHHHHHHHHHHHHhChHHHH
Confidence 9999999999999999999999984 68999999999999999999999999999999999999999764
No 4
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=100.00 E-value=8.8e-61 Score=451.10 Aligned_cols=227 Identities=32% Similarity=0.488 Sum_probs=216.8
Q ss_pred ccccccchhhhhhhhhccccccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCce
Q 014404 195 YVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSS 274 (425)
Q Consensus 195 ~~~~~~s~~rk~~a~~m~~s~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~~ 274 (425)
.+++|++++||.++++|.+||+++||||++.++|+|+|+++|+++|+... +.|.++||++|++||+++||++||+||++
T Consensus 15 ~~~~~~~~~rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~r~~~k~~~~-~~g~kls~~~~~ikA~~~Al~~~P~~Na~ 93 (243)
T 1dpb_A 15 IEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAE-KAGVKLTVLPLLLKACAYLLKELPDFNSS 93 (243)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHTHHHHH-HTTCCCCSHHHHHHHHHHHHHHSGGGGEE
T ss_pred ceEeeCcHHHHHHHHHHHHhCcCCCeEEEEEEEEhHHHHHHHHHHhhhhh-hccCCCChHHHHHHHHHHHHHhChHhhEE
Confidence 45689999999999999999999999999999999999999999886433 35789999999999999999999999999
Q ss_pred ecC--CceeeeCccceEEEeecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCCcc
Q 014404 275 WAD--EYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIK 352 (425)
Q Consensus 275 ~~~--~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~~l~~~d~~~~t~tISnlg~~~g~~ 352 (425)
|++ +.+++|+++|||+||++++||++|||++++++||.+|+++++++++++|+|+|+++|++||||||||+|| +|+.
T Consensus 94 ~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~-~g~~ 172 (243)
T 1dpb_A 94 LAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGH-IGGT 172 (243)
T ss_dssp ECTTSSCEEECSSCCEEECEEETTEEECCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCGGGGSCCSEEEEECTT-TCCS
T ss_pred EecCCCeEEEeCceeEEEEEECCCcEEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCC-CCcc
Confidence 985 4899999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred ceeeeeCCCCeeEEeeccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcCcccccC
Q 014404 353 QFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 425 (425)
Q Consensus 353 ~~~pii~~p~~ail~vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 425 (425)
+|+||+||||+|||++|+++++|++. +|++++|++|||||+||||+|||+++++||+.|+++||+|+.||+
T Consensus 173 ~~tpIin~pq~aIl~vG~~~~~pv~~--~g~i~~~~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 243 (243)
T 1dpb_A 173 AFTPIVNAPEVAILGVSKASMQPVWD--GKAFQPRLMLPLSLSYDCRVINGAAAARFTKRLGDLLADIRAILL 243 (243)
T ss_dssp CCCCCCCTTSSEEEEECCCEEEEEEC--SSSEEEEEEEEEEEEEETTTSCHHHHHHHHHHHHHHHHCGGGGGC
T ss_pred ceECccCCCCCeEEEccccEEEEEEE--CCeEEEEEEEEEEEEECcccccHHHHHHHHHHHHHHHhCHHhhhC
Confidence 99999999999999999999999984 789999999999999999999999999999999999999998875
No 5
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=100.00 E-value=8.3e-61 Score=451.31 Aligned_cols=218 Identities=31% Similarity=0.521 Sum_probs=210.8
Q ss_pred ccchhhhhhhhhccccccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCceecC-
Q 014404 199 PHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWAD- 277 (425)
Q Consensus 199 ~~s~~rk~~a~~m~~s~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~~~~~- 277 (425)
|++++||.|+++|.+|++++||||++.++|+|+|+++|+++++ .+.|+||++|++||+++||+++|+||++|++
T Consensus 18 pls~~rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~r~~~k~-----~~~kls~~~~iikAva~AL~~~P~~Na~~~~~ 92 (250)
T 3l60_A 18 PVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVS-----AAPEITPFALTLRLLVIALKHNVILNSTWVDS 92 (250)
T ss_dssp CCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTT-----TCTTCCHHHHHHHHHHHHHHHCGGGSEEEECT
T ss_pred CCcHHHHHHHHHHHHHhhcCCeEEEEEEEEHHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHhCHHhhEEEecc
Confidence 9999999999999999999999999999999999999999874 3779999999999999999999999999975
Q ss_pred ---CceeeeCccceEEEeecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCCccce
Q 014404 278 ---EYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQF 354 (425)
Q Consensus 278 ---~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~~l~~~d~~~~t~tISnlg~~~g~~~~ 354 (425)
+++++|+++|||+||++++||++|||++++++||.+|+++++++++++|+|+|+++|++||||||||+|| +|+.+|
T Consensus 93 ~~~~~i~~~~~vnigvAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~-~G~~~f 171 (250)
T 3l60_A 93 GEGPQVHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGA-LGVDDG 171 (250)
T ss_dssp TTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEEECGGG-GTCSSC
T ss_pred CCCCeEEEcCceeEEEEEEcCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCChhhcCCCEEEEEcCCC-CCccee
Confidence 3899999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred eeeeCCCCeeEEeeccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcCccccc
Q 014404 355 CAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESML 424 (425)
Q Consensus 355 ~pii~~p~~ail~vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll 424 (425)
+||||+||+|||++|++.++|++. +|++++|++|+|||+||||+|||+++++||+.|+++||+|+.|+
T Consensus 172 tpIinppq~aIL~vG~i~~~pv~~--~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~l~ 239 (250)
T 3l60_A 172 VPVINHPEAAILGLGAIKPRPVVV--GGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETAL 239 (250)
T ss_dssp CCCCCTTCSEEEEECCCEEEEEEE--TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSHHHHT
T ss_pred EeeeCCCCceEEEecceEEEeEEE--CCEEEEEEEeEEEEEecccccCHHHHHHHHHHHHHHHhCHHHHh
Confidence 999999999999999999999984 78999999999999999999999999999999999999999876
No 6
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-61 Score=451.64 Aligned_cols=229 Identities=53% Similarity=0.898 Sum_probs=217.1
Q ss_pred CccccccchhhhhhhhhccccccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCc
Q 014404 194 DYVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNS 273 (425)
Q Consensus 194 ~~~~~~~s~~rk~~a~~m~~s~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~ 273 (425)
.++++|++++||.|+++|.+||+++||||++.++|+|+|+++|+++|+.... +.++||++|++||+++||++||+||+
T Consensus 11 ~~~~~~~~~~rk~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~--~~kls~~~~~ikAv~~Al~~~P~~Na 88 (239)
T 3b8k_A 11 VFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEG--RSKISVNDFIIKASALACLKVPEANS 88 (239)
T ss_dssp SCCCSSSCCSHHHHHHHHHHHHHHCCCCCEEEEECCTTHHHHHHHTHHHHTT--SSCCCHHHHHHHHHHHHHHHCCCSCT
T ss_pred CceeccCChHHHHHHHHHHHhccCCCeEEEEEEEEcHHHHHHHHHHHhhhhc--cCCCCHHHHHHHHHHHHHHhChHhhE
Confidence 4567899999999999999999999999999999999999999998864322 35899999999999999999999999
Q ss_pred eecCCceeeeCccceEEEeecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCCccc
Q 014404 274 SWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQ 353 (425)
Q Consensus 274 ~~~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~~l~~~d~~~~t~tISnlg~~~g~~~ 353 (425)
+|+++.+++|+++|||+||++++||++|||++++++||.+|+++++++++++|+|+|+++|+++|||||||+|| +|+++
T Consensus 89 ~~~~~~i~~~~~v~igvAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~-~g~~~ 167 (239)
T 3b8k_A 89 SWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGM-FGIKN 167 (239)
T ss_dssp TSCCCSSSCSCCCCEEECEECSSCEECCEECCSSCCCHHHHHHHHHHHHHHHHTTCCCGGGGCCCSEEEEECCS-SCCSS
T ss_pred EEECCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCC-CCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred eeeeeCCCCeeEEeeccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcCcccccC
Q 014404 354 FCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 425 (425)
Q Consensus 354 ~~pii~~p~~ail~vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 425 (425)
|+||+|+||+|||++|+++++|++...+|++++|++|||||+||||+|||+++++||+.|+++||+|+.||+
T Consensus 168 ftpiin~pq~aIl~vG~~~~~pv~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 239 (239)
T 3b8k_A 168 FSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL 239 (239)
T ss_dssp CCCCCCTTSCCCCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSSCHHHHHHHHHHHHHHHHCTHHHHC
T ss_pred EECcCCCCceEEEECcccEEEEEEEcCCCcEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHhhhC
Confidence 999999999999999999999987423688999999999999999999999999999999999999998875
No 7
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=5.9e-60 Score=449.22 Aligned_cols=228 Identities=30% Similarity=0.446 Sum_probs=214.8
Q ss_pred CccccccchhhhhhhhhccccccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCc
Q 014404 194 DYVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNS 273 (425)
Q Consensus 194 ~~~~~~~s~~rk~~a~~m~~s~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~ 273 (425)
..+++|++++||.|+++|.+|+ ++||||++.++|+|+|+++|+++|+.. .+.|.++||++|++||+++||++||+||+
T Consensus 30 ~~~~~p~~~~rk~ia~~m~~S~-~~P~~~~~~evDvt~l~~~r~~~k~~~-~~~g~kls~~~~~ikAva~Al~~~P~~Na 107 (262)
T 2ii3_A 30 KDRTEPVKGFHKAMVKTMSAAL-KIPHFGYCDEVDLTELVKLREELKPIA-FARGIKLSFMPFFLKAASLGLLQFPILNA 107 (262)
T ss_dssp CCEEEECCGGGHHHHHHHHHGG-GSCEEEEEEEEECHHHHHHHHHHHHHH-HHTTCCCCSHHHHHHHHHHHHHHCGGGSE
T ss_pred CcceecCCHHHHHHHHHHHHhh-hCCeEEEEEEEEhHHHHHHHHHHhhhh-hhccCCccHHHHHHHHHHHHHHhChHhhE
Confidence 3567899999999999999996 699999999999999999999998642 23588999999999999999999999999
Q ss_pred eecC--CceeeeCccceEEEeecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCCc
Q 014404 274 SWAD--EYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGI 351 (425)
Q Consensus 274 ~~~~--~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~~l~~~d~~~~t~tISnlg~~~g~ 351 (425)
+|++ +.+++|+++|||+||++++||++|||++++++||.+|+++++++++++|+|+|+++|+++|||||||+|| +|+
T Consensus 108 ~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggTftISNlG~-~G~ 186 (262)
T 2ii3_A 108 SVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGS-IGG 186 (262)
T ss_dssp EECTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGGG-TCC
T ss_pred EEeCCCCEEEEecccceEEEEEcCCCEEEEEecCCCCCCHHHHHHHHHHHHHHHHhCCCCcccCCCCEEEEEeCCC-CCc
Confidence 9985 4899999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cceeeeeCCCCeeEEeeccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcCcccccC
Q 014404 352 KQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 425 (425)
Q Consensus 352 ~~~~pii~~p~~ail~vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 425 (425)
.+|+|||||||+|||++|+++++|++. .+|++++|++|+|||+||||+|||+++++||+.|+++||+|+.||+
T Consensus 187 ~~~tPIinppq~aIL~vG~~~~~pv~~-~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~ll~ 259 (262)
T 2ii3_A 187 TYAKPVILPPEVAIGALGTIKALPRFN-EKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLL 259 (262)
T ss_dssp SCEECCCCTTCCEEEEECCCEEEEEEC-TTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSTHHHHH
T ss_pred cceECccCCCcceEEEcCccEEEEEEe-cCCcEEEEeeeEEEEEECcceecHHHHHHHHHHHHHHHhCHHHHHh
Confidence 999999999999999999999999984 2689999999999999999999999999999999999999998753
No 8
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=1.5e-59 Score=437.51 Aligned_cols=215 Identities=29% Similarity=0.494 Sum_probs=206.9
Q ss_pred ccccccchhhhhhhhhccccccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCce
Q 014404 195 YVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSS 274 (425)
Q Consensus 195 ~~~~~~s~~rk~~a~~m~~s~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~~ 274 (425)
.+++|++++||.+|++|.+|++++||||++.++|+|+|+++|+++|+. |.|+||++|++||+++||++||+||++
T Consensus 6 ~~~~p~~~~r~~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~-----g~kls~~~~~ikA~~~Al~~~P~~N~~ 80 (224)
T 3rqc_A 6 EEILEMHGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILDSAKAR-----NRKVTVTGFLARIVPSILKQYPYLNAI 80 (224)
T ss_dssp CBCCCCCHHHHHHHHHHHHHHHHSCEEEEEECCBTHHHHHHHHHHTTT-----TCCCCHHHHHHHHHHHHHHHSGGGSBB
T ss_pred ceEeeCcHHHHHHHHHHHHHhcCCCeEEEEEEEEHHHHHHHHHHHhhc-----CCCCCHHHHHHHHHHHHHHhCHHhheE
Confidence 457899999999999999999999999999999999999999998742 789999999999999999999999999
Q ss_pred ecCC--ceeeeCccceEEEeecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCCcc
Q 014404 275 WADE--YIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIK 352 (425)
Q Consensus 275 ~~~~--~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~~l~~~d~~~~t~tISnlg~~~g~~ 352 (425)
|+++ ++++|+++|||+||++++||++|||++++++||.+|+++++++++++|+|+|.++|++||||||||+|| +|+.
T Consensus 81 ~~~~~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~sl~~i~~~~~~l~~~ar~~~L~~~e~~ggtftISnlG~-~G~~ 159 (224)
T 3rqc_A 81 YDETRRVYILKKYYNIGIAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQLDEVQDSTFTITNVGT-IGGI 159 (224)
T ss_dssp CCSSTTCCCEECSCCEEEEEECSSCEEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCCCGGGSCCCSEEEEECTT-TCCS
T ss_pred EeCCCCEEEEeCccceEeEEEcCCceEEeEECCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCc-CCcc
Confidence 9877 899999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred ceeeeeCCCCeeEEeeccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcCcccccC
Q 014404 353 QFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 425 (425)
Q Consensus 353 ~~~pii~~p~~ail~vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 425 (425)
+|+||+|+||+|||++|++.++|+ |++|||||+||||+|||+++++||+.|+++||+|+.||+
T Consensus 160 ~~tpiin~pq~aIl~vG~~~~~p~----------r~~m~lsls~DHRviDGa~aa~Fl~~l~~~le~p~~ll~ 222 (224)
T 3rqc_A 160 MSTPIINYPEVAILGVHRILEREG----------RKYMYLSLSCDHRLIDGAVATRFIVDLKKVIEDPNAIIY 222 (224)
T ss_dssp EEECCCCTTBSEEEEECCCEEETT----------EEECCEEEEEETTTSCHHHHHHHHHHHHHHHTCTTTTTC
T ss_pred ceEeccCCCCceEEEecccEEECC----------ceEEEEEEEeccceecHHHHHHHHHHHHHHHhCHHHHhh
Confidence 999999999999999999998854 889999999999999999999999999999999999875
No 9
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=8.7e-47 Score=419.05 Aligned_cols=212 Identities=20% Similarity=0.310 Sum_probs=176.4
Q ss_pred hccccccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCceecCC----ceeeeCc
Q 014404 210 RLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWADE----YIRQFKN 285 (425)
Q Consensus 210 ~m~~s~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~~~~~~----~i~~~~~ 285 (425)
+|.+|+ ++||||++.++|+|+|+++|+++|+......|.|+||++|++||+++||++||+||++|+++ .++++++
T Consensus 1 ~m~~S~-~~P~~t~~~evDvt~l~~~R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~i~~~~~ 79 (1113)
T 2xt6_A 1 GMNASL-EVPTATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGKPTAITPAH 79 (1113)
T ss_dssp -------CCCEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHCGGGGCEEEESSSSEEEECCSS
T ss_pred Chhhhc-cCCeEEEEEEEehHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhChHhhEEEeccCCCceEEEeCc
Confidence 477885 79999999999999999999999876555568899999999999999999999999999753 6999999
Q ss_pred cceEEEeecC--CC---eEEEEEecCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCCccceeeeeCC
Q 014404 286 VNINVAVQTE--NG---LYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINP 360 (425)
Q Consensus 286 i~i~~av~~~--~g---l~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~~l~~~d~~~~t~tISnlg~~~g~~~~~pii~~ 360 (425)
+|||+||+++ +| |++|||++++++||.+|+++++++++++|+|+|+++|+++|||||||+|| +|+.+|+|||||
T Consensus 80 vnigiAV~t~~~~G~~gL~vPvI~~a~~~sl~ei~~~i~~l~~rAr~gkL~~~d~~ggTftISNlG~-~G~~~~tPIinp 158 (1113)
T 2xt6_A 80 TNLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARDGKLTAEDFSGVTISLTNPGT-LGTVHSVPRLMQ 158 (1113)
T ss_dssp CCEEEEC-----------CEEEECCGGGCCHHHHHHHHHHHHHHHTTTCCCGGGTSCCSEEEECC-------------CT
T ss_pred ccEEEEEeccCCCCceeEEeeeecCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCEEEEeCCCc-CCCcceECCCCC
Confidence 9999999997 66 99999999999999999999999999999999999999999999999999 999999999999
Q ss_pred CCeeEEeeccceEEeeecCCC----CceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcCcccc
Q 014404 361 PQSGILAVGSAEKRVVPGLGP----DQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESM 423 (425)
Q Consensus 361 p~~ail~vG~i~~~~v~~~~~----g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~l 423 (425)
||+|||++|++.++|++...+ |++++|++|+||||||||+|||+++++||+.|+++||+|+.|
T Consensus 159 pq~aIL~vG~i~~~pv~~~~~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~FL~~lk~~Le~p~~w 225 (1113)
T 2xt6_A 159 GQGAIIGAGAMEYPAEFQGASEERIADLGIGKLITLTSTYDHRIIQGAESGDFLRTIHQLLLDDDFF 225 (1113)
T ss_dssp TCSEEEEECCCBCCTTSTTCCHHHHHHHTCCCEEEEEEEEETTTCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCceEEEcCccEEEeEEcCCCcccCCceeEeeeeEEEEEECcceechHHHHHHHHHHHHHHhCcHHH
Confidence 999999999999998874211 589999999999999999999999999999999999999854
No 10
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=100.00 E-value=1.6e-44 Score=335.03 Aligned_cols=185 Identities=13% Similarity=0.140 Sum_probs=168.3
Q ss_pred cccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCceecCCceeeeCccceEEEe-
Q 014404 214 SKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWADEYIRQFKNVNINVAV- 292 (425)
Q Consensus 214 s~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~~~~~~~i~~~~~i~i~~av- 292 (425)
...++|||+++.++|+|+|+++|++. ++||+++++||+++||+++|+||++|+++.+++++++|||+||
T Consensus 26 ~~~~~P~~t~~~evDvt~l~~~rk~~----------~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAV~ 95 (219)
T 1q23_A 26 QSVAQCTYNQTVQLDITAFLKTVKKN----------KHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVF 95 (219)
T ss_dssp TTTTCEEEEEEEEEECHHHHHHHHHT----------TCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEE
T ss_pred cCCCCcEEEEEEEEEhHHHHHHHHHc----------CCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEecccCeEEEEE
Confidence 34689999999999999999999753 5999999999999999999999999999999999999999999
Q ss_pred ecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcC-CCCC-CCCCCCeEEEeeCCCCCCccceeeeeCCCC---eeEEe
Q 014404 293 QTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDN-SLKP-QDYEGGTFTVTNLGGPFGIKQFCAIINPPQ---SGILA 367 (425)
Q Consensus 293 ~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~-~l~~-~d~~~~t~tISnlg~~~g~~~~~pii~~p~---~ail~ 367 (425)
++++||++||++. +.+++.+|+++++++++++|+| +|.+ +++ ||||||||+|| ++++.+++.+++|. ++||+
T Consensus 96 ~t~~GL~~pvi~~-~~~~l~~i~~~~~~l~~~ar~~~kL~~~~~~-ggtftISnlG~-~~ft~i~~~~~~~~~~~~pIi~ 172 (219)
T 1q23_A 96 HEQTETFSSLWSE-YHDDFRQFLHIYSQDVACYGENLAYFPKGFI-ENMFFVSANPW-VSFTSFDLNVANMDNFFAPVFT 172 (219)
T ss_dssp ETTTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTCCC-SSEEEEEECTT-CCCSEEEEEESCCTTCCSCEEE
T ss_pred ecCCcEEEEEEec-CCCCHHHHHHHHHHHHHHHHccCCCCCcccc-CCEEEEEcCcc-ccccccccCCCCCccceeEEEe
Confidence 9999999999986 5679999999999999999998 5975 889 99999999999 88777766666543 69999
Q ss_pred eccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcCcc
Q 014404 368 VGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPE 421 (425)
Q Consensus 368 vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~ 421 (425)
+|++.++ ++ |.+|||||+||||+|||+++|+||+.|+++||+|.
T Consensus 173 ~G~~~~~------~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~~~ 216 (219)
T 1q23_A 173 MGKYYTQ------GD----KVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQ 216 (219)
T ss_dssp ECCCEEE------TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred cccEEEE------CC----cEEEEEEEEEEchhhChHHHHHHHHHHHHHHhCcc
Confidence 9999876 45 78999999999999999999999999999999863
No 11
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=100.00 E-value=6.5e-44 Score=329.82 Aligned_cols=182 Identities=13% Similarity=0.161 Sum_probs=166.4
Q ss_pred cCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCceecCCceeeeCccceEEEe-ec
Q 014404 216 QTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWADEYIRQFKNVNINVAV-QT 294 (425)
Q Consensus 216 ~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~~~~~~~i~~~~~i~i~~av-~~ 294 (425)
.++||++++.++|+|+|+++|++. ++||+++++||+++||+++|+||++|+++.+++++++|||+|| ++
T Consensus 23 ~~~P~~~~~~evDvt~l~~~rk~~----------~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAVf~t 92 (213)
T 3cla_A 23 RLPCGFSLTSKIDITTLKKSLDDS----------AYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQ 92 (213)
T ss_dssp TSCCEEEEEEEEECHHHHHHHHTS----------SCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred CCCceEEEEEEEEHHHHHHHHHHh----------CCCHHHHHHHHHHHHHhhCHHhhEEEECCEEEEEeccceeEEEEeC
Confidence 579999999999999999998642 5999999999999999999999999999999999999999999 99
Q ss_pred CCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcC-CCCC-CCCCCCeEEEeeCCCCCCccceeeeeCCC---CeeEEeec
Q 014404 295 ENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDN-SLKP-QDYEGGTFTVTNLGGPFGIKQFCAIINPP---QSGILAVG 369 (425)
Q Consensus 295 ~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~-~l~~-~d~~~~t~tISnlg~~~g~~~~~pii~~p---~~ail~vG 369 (425)
++||++||+++ +.+++.+|+++++++++++|++ +|.+ +|++||||||||+|| ++++.++...+.+ ..+|+++|
T Consensus 93 ~~GL~vpvi~~-~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~ggtftISnlg~-~~ft~i~~~~~~g~~~~~PIi~~G 170 (213)
T 3cla_A 93 ETETFSALSCP-YSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPW-VNFDSFNLNVANFTDYFAPIITMA 170 (213)
T ss_dssp TTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTSSCCSSEEEEEEETT-CCCSCCCCCCSCCTTCCSCEEEEE
T ss_pred CCceEEEEEec-CCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEEcCCC-CCcccccccCCCCCcccccEEEee
Confidence 99999999987 5689999999999999999996 9987 789999999999999 8888775444434 25899999
Q ss_pred cceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhcC
Q 014404 370 SAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 419 (425)
Q Consensus 370 ~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~ 419 (425)
++.++ +| |.+|||||+||||+|||+++|+||+.|+++||+
T Consensus 171 ~~~~~------~~----~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 210 (213)
T 3cla_A 171 KYQQE------GD----RLLLPLSVQVHHAVCDGFHVARFINRLQELCNS 210 (213)
T ss_dssp CCEEE------TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHTS
T ss_pred EEEEE------CC----eEEEEEEEEEcccccChHHHHHHHHHHHHHHHh
Confidence 99876 45 789999999999999999999999999999998
No 12
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.8e-42 Score=319.16 Aligned_cols=181 Identities=14% Similarity=0.164 Sum_probs=164.7
Q ss_pred ccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhhCCCCCceec-CCceeeeCccceEEEe-
Q 014404 215 KQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWA-DEYIRQFKNVNINVAV- 292 (425)
Q Consensus 215 ~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~~P~ln~~~~-~~~i~~~~~i~i~~av- 292 (425)
..++||++++.++|+|+|+++|++. ++||+++++||+++||+++|+||++|+ ++.+++++++|||+||
T Consensus 24 ~~~~P~~~~~~evDvt~l~~~rk~~----------~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i~igvAVf 93 (217)
T 2i9d_A 24 HFQNPQLSITSEVECGGARQRAKAA----------GQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDMLSPIK 93 (217)
T ss_dssp TCSBCEEEEEEEEECHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCCEEEEEEE
T ss_pred CCCCceEEEEEEEEhHHHHHHHHHc----------CCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecccCeEEEEE
Confidence 3679999999999999999998753 599999999999999999999999999 8899999999999999
Q ss_pred ecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhc-CCCCCC------CCCCCeEEEeeCCCCCCccceeeeeCCC---C
Q 014404 293 QTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKD-NSLKPQ------DYEGGTFTVTNLGGPFGIKQFCAIINPP---Q 362 (425)
Q Consensus 293 ~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~-~~l~~~------d~~~~t~tISnlg~~~g~~~~~pii~~p---~ 362 (425)
++++||++|++. ++.+++.+|+++++++++++|+ ++|+++ |++||||||||+|| ++++.++...+++ .
T Consensus 94 ~t~~GL~~pv~~-~~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~~~e~~ggtftISnlg~-~~ft~i~~~~~~g~~~~ 171 (217)
T 2i9d_A 94 IKENGKFFTTRF-PYHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPD-LYFTSITGTQEKRSGNN 171 (217)
T ss_dssp CSTTSCEEEEEE-CCCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTT-CCCSEECCCBCSTTCCS
T ss_pred ecCCceEeEEEe-cCCCCHHHHHHHHHHHHHHHHhcCCCCCccccccccCCCCEEEEEcCCc-cccceeecCCCCCccce
Confidence 999999999986 4678999999999999999998 599984 99999999999999 9988776555544 2
Q ss_pred eeEEeeccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHh
Q 014404 363 SGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYI 417 (425)
Q Consensus 363 ~ail~vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~l 417 (425)
.+|+++|++.++ ++ |.+|||||+||||+|||+|+|+||+.|+++|
T Consensus 172 ~PIi~~Gk~~~~------~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 172 YPLLNAGKAIIR------EG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SCEEEECCCEEE------TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEecceEEEE------CC----cEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 589999999875 45 7899999999999999999999999999987
No 13
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=99.96 E-value=6.4e-31 Score=244.25 Aligned_cols=161 Identities=43% Similarity=0.710 Sum_probs=38.6
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCee-eeCCCEEEEEeccccccc
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKE-IKVGEVIAITVEEEEDIP 79 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~-v~~g~~l~~~~~~~~~~~ 79 (425)
||+||++|++|+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++| +. |.+|++|+++.+.+++..
T Consensus 8 mP~lGesm~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G-~~~V~~G~~l~~i~~~~~~~~ 86 (229)
T 1zy8_K 8 MPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEG-SKNIRLGSLIGLIVEEGEDWK 86 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCCcEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCC-CeeecCCCEEEEEeccCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999 76 999999998865432211
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCcccChhHHhHHHHcCCCCCccccCCCC
Q 014404 80 KFKDYSPSVSDAGAAPAKEPSPPPPPKQEEVEKPISTSEPKASKPSAASPEDRLFASPVARNLAEEHNVSLSSIKGTGPN 159 (425)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aR~lA~e~gIdl~~v~gtG~~ 159 (425)
... .+...... .+....+.+.+ .+ .+. ...+. .........++++||+|||||+|+||||+.|+|||++
T Consensus 87 ~~~--~~~~~~~~-~~~~~~~~~~~-~~----~~~-~~~~~--~~~~~~~~~~~~asP~vRklAre~gVDL~~V~GTGp~ 155 (229)
T 1zy8_K 87 HVE--IPKDVGPP-PPVSKPSEPRP-SP----EPQ-ISIPV--KKEHIPGTLRFRLSPAARNILEKHSLDASQGTATGPR 155 (229)
T ss_dssp ------------------------------------------------------CBCHHHHHHHHHTTCCSSSSCCCSTT
T ss_pred ccc--cccccccc-cccccCCCccc-cc----ccc-cCCCc--ccccccccccccCChHHHHHHHHcCCCccccCCCCCC
Confidence 000 00000000 00000000000 00 000 00000 0000011235779999999999999999999999999
Q ss_pred CccchhhHHHHHHh
Q 014404 160 GLIVKADIEDYLAS 173 (425)
Q Consensus 160 GrI~~~DV~~~~~~ 173 (425)
|||+++||++|++.
T Consensus 156 GRItk~DV~~~~~~ 169 (229)
T 1zy8_K 156 GIFTKEDALKLVQL 169 (229)
T ss_dssp SCBCHHHHHHHHHH
T ss_pred CceehHHHHHHHhh
Confidence 99999999999874
No 14
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.75 E-value=5.4e-18 Score=142.96 Aligned_cols=77 Identities=52% Similarity=0.893 Sum_probs=72.7
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCe-eeeCCCEEEEEecccccc
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSK-EIKVGEVIAITVEEEEDI 78 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~-~v~~g~~l~~~~~~~~~~ 78 (425)
||++|++|.+|+|++|+|++||.|++||+|++||+||++++|+||++|+|.++++++| + .|.+|++|+++.+.+++.
T Consensus 32 ~P~lG~~~~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~G-d~~V~~G~~L~~i~~~~~~~ 109 (128)
T 1y8o_B 32 LPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEG-TRDVPLGTPLCIIVEKEADI 109 (128)
T ss_dssp CCCSSTTCSEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTT-CCSEETTCEEEEEESSGGGG
T ss_pred cCCCCCCcccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCC-CeeecCCCEEEEEecCccch
Confidence 7999999999999999999999999999999999999999999999999999999999 7 799999999987655443
No 15
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.74 E-value=2.5e-18 Score=141.34 Aligned_cols=77 Identities=58% Similarity=0.971 Sum_probs=72.7
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCe-eeeCCCEEEEEecccccc
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSK-EIKVGEVIAITVEEEEDI 78 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~-~v~~g~~l~~~~~~~~~~ 78 (425)
||++|++|.+|+|++|+|++||.|++||+||+||+||+.++|+||++|+|.++++++| + .|.+|++|+++.+.+++.
T Consensus 12 ~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G-~~~V~~G~~l~~i~~~~~~~ 89 (108)
T 2dne_A 12 LPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEG-TRDVPIGAIICITVGKPEDI 89 (108)
T ss_dssp CCCCSSSCCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTT-CCSEETTCEEEEEESCHHHH
T ss_pred cCCCCCCcccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCC-CeeecCCCEEEEEecCccch
Confidence 7999999999999999999999999999999999999999999999999999999999 8 899999999987655443
No 16
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.73 E-value=1.1e-17 Score=132.28 Aligned_cols=74 Identities=50% Similarity=0.873 Sum_probs=70.8
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCe-eeeCCCEEEEEeccc
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSK-EIKVGEVIAITVEEE 75 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~-~v~~g~~l~~~~~~~ 75 (425)
||++|+++.+|+|.+|+|++||.|++||+|+++|+||+.++|+||++|+|.++++++| + .|.+|++|+++.+.+
T Consensus 10 ~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G-~~~V~~G~~l~~i~~~~ 84 (87)
T 3crk_C 10 LPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEG-TRDVPLGTPLCIIVEKE 84 (87)
T ss_dssp CCCSSTTCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTT-CCCEETTCEEEEEESSS
T ss_pred CCCCCCCCCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCC-CeEECCCCEEEEEEccc
Confidence 7999999999999999999999999999999999999999999999999999999999 8 799999999986543
No 17
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=1.3e-17 Score=134.69 Aligned_cols=74 Identities=57% Similarity=0.987 Sum_probs=70.8
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeee-eCCCEEEEEeccc
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEI-KVGEVIAITVEEE 75 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v-~~g~~l~~~~~~~ 75 (425)
||++|++|.+|+|++|+|++||.|++||+||++|+||+.++|+||++|+|.++++++| +.| .+|++|+++...+
T Consensus 12 ~P~lg~~~~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G-~~Vv~~G~~l~~i~~~~ 86 (98)
T 2dnc_A 12 MPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEG-SKNIRLGSLIGLIVEEG 86 (98)
T ss_dssp CCCCSTTCSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTT-CCCEESSCEEEEEECTT
T ss_pred CCCCCCCCccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCC-CEEcCCCCEEEEEecCC
Confidence 7999999999999999999999999999999999999999999999999999999999 798 9999999986544
No 18
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.70 E-value=3.1e-17 Score=131.25 Aligned_cols=72 Identities=26% Similarity=0.437 Sum_probs=69.8
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
||++|+++.+|+|++|+|++||.|++||+|+++|+||+.++|+||++|+|.++++++| +.|.+|++|+++..
T Consensus 9 ~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G-~~V~~G~~l~~i~~ 80 (93)
T 1k8m_A 9 LSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLD-DIAYVGKPLVDIET 80 (93)
T ss_dssp CCSSCTTSCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSS-CEECTTSEEEEEEC
T ss_pred cCCCCCCCCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCC-CEeCCCCEEEEEec
Confidence 7999999999999999999999999999999999999999999999999999999999 79999999998854
No 19
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.67 E-value=1e-16 Score=124.27 Aligned_cols=72 Identities=32% Similarity=0.650 Sum_probs=69.5
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
||++|+++.+|+|.+|+|++||.|++||+|+++|++|+..+|+||++|+|.++++++| +.+..|++|+.+..
T Consensus 6 ~P~~g~~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G-~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 6 APTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEG-DTVLSGELLGKLTE 77 (79)
T ss_dssp CCCCCSSCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTT-CEECTTCEEEEECC
T ss_pred CCCCCCCCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCc-CEECCCCEEEEEec
Confidence 7999999999999999999999999999999999999999999999999999999999 79999999998743
No 20
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.61 E-value=9.9e-16 Score=118.09 Aligned_cols=71 Identities=35% Similarity=0.550 Sum_probs=68.9
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEe
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 72 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~ 72 (425)
||++|+++.+|+|.+|++++||.|++||+|+++|++|+..+|.||++|+|.++++++| +.|..|++|+.+.
T Consensus 6 ~P~~g~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G-~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 6 LPDIGEGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREG-QVVPVGSTLLQID 76 (77)
T ss_dssp CCCCSSSCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTT-CEECSCSEEEEEE
T ss_pred CCCCCCCCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCc-CEECCCCEEEEEE
Confidence 7999999999999999999999999999999999999999999999999999999999 7999999999873
No 21
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.60 E-value=3.7e-17 Score=127.16 Aligned_cols=71 Identities=30% Similarity=0.586 Sum_probs=68.8
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEe
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 72 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~ 72 (425)
||++|+++.+|+|.+|+|++||.|++||+|+++|+||+.++|+||++|+|.++++++| +.+.+|++|+.+.
T Consensus 7 ~P~~g~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G-~~v~~G~~l~~i~ 77 (80)
T 1pmr_A 7 VPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEG-TTVTSRQILGRLR 77 (80)
T ss_dssp CCCCCSCCSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTT-CEECSSSEEEBCC
T ss_pred cCCCCCCCccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCc-CEECCCCEEEEEe
Confidence 7999999999999999999999999999999999999999999999999999999999 7999999998764
No 22
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.59 E-value=2e-15 Score=117.22 Aligned_cols=70 Identities=29% Similarity=0.411 Sum_probs=67.5
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
||++|++ +|+|.+|++++||.|++||+|+++|++|+..+|.||++|+|.++++++| +.|..|++|+.+..
T Consensus 7 ~p~~g~~--~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G-~~V~~G~~l~~i~~ 76 (80)
T 1qjo_A 7 VPDIGGD--EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVG-DKVKTGSLIMIFEV 76 (80)
T ss_dssp CCCCSSS--CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTT-CEECTTCCCEEEES
T ss_pred CCCCCCC--CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCC-CEECCCCEEEEEEc
Confidence 7999998 9999999999999999999999999999999999999999999999999 79999999999864
No 23
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.57 E-value=8e-15 Score=113.56 Aligned_cols=69 Identities=22% Similarity=0.335 Sum_probs=66.0
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
||++|++ + +|.+|+|++||.|++||+|+++|++|+..+|.||++|+|.++++++| +.|..|++|+.+..
T Consensus 6 ~P~~g~~--~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G-~~V~~g~~l~~i~~ 74 (79)
T 1iyu_A 6 VPDIGGD--G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLG-DKLKEGDAIIELEP 74 (79)
T ss_dssp CCCCSSE--E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTT-CEEETTSEEEEEEC
T ss_pred CCCCCCC--C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCC-CEECCCCEEEEEec
Confidence 7999996 7 99999999999999999999999999999999999999999999999 79999999998854
No 24
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.53 E-value=4.5e-15 Score=115.51 Aligned_cols=71 Identities=23% Similarity=0.357 Sum_probs=67.7
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 1 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 1 ~P~~~~~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
||++| ++..|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++| +.+..|++|+.+..
T Consensus 7 ~p~~g-~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G-~~v~~g~~l~~i~~ 77 (81)
T 1gjx_A 7 VPDIG-GHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVG-DKISEGGLIVVVEA 77 (81)
T ss_dssp CCCCS-SCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSS-CEECSSSCCCEECC
T ss_pred cCCCC-CCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCC-CEeCCCCEEEEEEe
Confidence 79999 6889999999999999999999999999999999999999999999999999 79999999998743
No 25
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.38 E-value=1.6e-12 Score=98.51 Aligned_cols=64 Identities=20% Similarity=0.353 Sum_probs=60.9
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
..|+|.+|++++||.|++||+|+++|++|...+|.||++|+|.++++++| +.|..|++|+.+.+
T Consensus 6 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G-~~V~~G~~l~~i~~ 69 (72)
T 1z6h_A 6 MAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEG-DFVNEGDVLLELSN 69 (72)
T ss_dssp SSEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTT-CEECTTCEEEEEGG
T ss_pred ccEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCC-CEECCCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999999999 79999999998754
No 26
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.36 E-value=5.2e-13 Score=104.54 Aligned_cols=65 Identities=22% Similarity=0.352 Sum_probs=60.9
Q ss_pred CceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEecc
Q 014404 8 MQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 74 (425)
Q Consensus 8 ~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~~ 74 (425)
-..|+|.+|++++||.|++||+|++||++|+.++|+||++|+|.++. ++| +.|.+|++|+.+.+.
T Consensus 11 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G-~~V~~G~~l~~i~~~ 75 (84)
T 2kcc_A 11 PSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPG-AVLEAGCVVARLELD 75 (84)
T ss_dssp SSSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTT-CCCCTTCCCEEEECS
T ss_pred CCCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCC-CEECCCCEEEEEeCC
Confidence 35699999999999999999999999999999999999999999999 999 799999999988643
No 27
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.35 E-value=1.1e-13 Score=108.67 Aligned_cols=63 Identities=30% Similarity=0.397 Sum_probs=60.6
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEecc
Q 014404 11 GNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 74 (425)
Q Consensus 11 g~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~~ 74 (425)
|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++| +.|..|++|+.+...
T Consensus 11 G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G-~~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 11 VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVG-DKVKTGSLIMIFEVE 73 (85)
T ss_dssp CCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTT-CCBCTTSEEEEEECC
T ss_pred EEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCC-CEECCCCEEEEEEcC
Confidence 899999999999999999999999999999999999999999999999 799999999998653
No 28
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=99.31 E-value=8.9e-13 Score=88.60 Aligned_cols=40 Identities=33% Similarity=0.646 Sum_probs=37.4
Q ss_pred cccChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHHH
Q 014404 133 LFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLA 172 (425)
Q Consensus 133 ~~asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~~ 172 (425)
+++||+||++|+++||||+.|+|||++|||+++||++|++
T Consensus 1 ~~asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~~ 40 (41)
T 2eq9_C 1 MLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE 40 (41)
T ss_dssp CCBCHHHHHHHHHTTCCGGGSCCCSTTCCBCHHHHHHHHC
T ss_pred CCCChHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHhc
Confidence 3579999999999999999999999999999999999863
No 29
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=99.31 E-value=7.1e-13 Score=95.24 Aligned_cols=43 Identities=44% Similarity=0.752 Sum_probs=39.3
Q ss_pred CCcccChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHHHh
Q 014404 131 DRLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLAS 173 (425)
Q Consensus 131 ~~~~asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~~~ 173 (425)
.++.+||+||+||+++||||+.|+|||++|||+++||++|++.
T Consensus 6 ~~v~aSPaaRrlA~e~gIdl~~V~GTG~~GRItk~DV~~~~~~ 48 (58)
T 3rnm_E 6 RKTLATPAVRNLAMENNIKLSEVVGSGKDGRILKEDILNYLEK 48 (58)
T ss_dssp --CCCCHHHHHHHHHTTCCGGGCCCCSGGGCCCHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHcCCCHHHCCCCCCCCceeHHHHHHHHhh
Confidence 3577999999999999999999999999999999999999864
No 30
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=4.7e-12 Score=102.45 Aligned_cols=63 Identities=22% Similarity=0.390 Sum_probs=60.0
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
..|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|. +++++| +.|..|++|+.+..
T Consensus 24 ~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G-~~V~~G~~l~~i~~ 86 (100)
T 2dn8_A 24 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPG-AVLEAGCVVARLEL 86 (100)
T ss_dssp SCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTT-CEECSSCEEEEECC
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCC-CEECCCCEEEEEEc
Confidence 5699999999999999999999999999999999999999999 999999 79999999998854
No 31
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=99.27 E-value=2.1e-12 Score=86.30 Aligned_cols=37 Identities=38% Similarity=0.587 Sum_probs=35.9
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYL 171 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~ 171 (425)
+||+||++|+++|||++.|+|||++|||+++||++|+
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq8_C 2 AAPSIRRLARELGVDLTRLRGTGLAGRITEEDVRRAA 38 (40)
T ss_dssp CCHHHHHHHHHHTCCGGGCCCCSTTSCCCHHHHHHHH
T ss_pred CChHHHHHHHHhCCChhhcCCCCCCCceeHHHHHHHh
Confidence 6999999999999999999999999999999999986
No 32
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=99.26 E-value=1.4e-12 Score=87.14 Aligned_cols=37 Identities=41% Similarity=0.587 Sum_probs=35.0
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYL 171 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~ 171 (425)
+||+||++|+++||||+.|+|||++|||+++||++|+
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq7_C 2 AMPAAERLMQEKGVSPAEVQGTGLGGRILKEDVMRHL 38 (40)
T ss_dssp CCHHHHHHHHHTTCCTTTSCCCSSSSCCCHHHHTTC-
T ss_pred CCcHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHh
Confidence 6999999999999999999999999999999999875
No 33
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.26 E-value=2.3e-11 Score=92.36 Aligned_cols=62 Identities=24% Similarity=0.403 Sum_probs=59.4
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEE
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~ 71 (425)
..|+|.+|++++||.|++||+|++++++|+..+|.||.+|+|.++.+++| +.+..|++|+.+
T Consensus 12 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G-~~v~~g~~l~~i 73 (74)
T 2d5d_A 12 MPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEG-EAVDTGQPLIEL 73 (74)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTT-CEECTTCEEEEE
T ss_pred CCEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCc-CEECCCCEEEEE
Confidence 46999999999999999999999999999999999999999999999999 799999999876
No 34
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.24 E-value=2.4e-12 Score=103.00 Aligned_cols=62 Identities=21% Similarity=0.340 Sum_probs=26.2
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEE
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~ 71 (425)
..|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++.+++| +.|..|++|+.+
T Consensus 32 ~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G-~~V~~G~~L~~i 93 (94)
T 2jku_A 32 MPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAG-DTVGEGDLLVEL 93 (94)
T ss_dssp SSCEEEEECCCTTCCCCTTCCCEEEEC------------------------------------
T ss_pred CCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCc-CEECCCCEEEEE
Confidence 57999999999999999999999999999999999999999999999999 799999999865
No 35
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.23 E-value=2.5e-11 Score=93.06 Aligned_cols=62 Identities=23% Similarity=0.400 Sum_probs=59.5
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEE
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~ 71 (425)
..|+|.+|++++||.|++||+|++++++|+..+|.||++|+|.++.+++| +.+..|++|+.+
T Consensus 15 ~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G-~~v~~G~~l~~i 76 (77)
T 1dcz_A 15 LAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKER-DAVQGGQGLIKI 76 (77)
T ss_dssp SSCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTT-CBCCBTSEEEEE
T ss_pred CCEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCc-CEECCCCEEEEE
Confidence 46999999999999999999999999999999999999999999999999 799999999876
No 36
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.23 E-value=1.7e-11 Score=94.89 Aligned_cols=61 Identities=26% Similarity=0.435 Sum_probs=57.1
Q ss_pred eEEEEE-------EEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEE
Q 014404 10 EGNIAR-------WLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 10 eg~i~~-------~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~ 71 (425)
.|+|.+ |++++||.|++||+|+++|++|+..+|+||++|+|.++++++| +.|..|++|+.+
T Consensus 12 ~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G-~~V~~G~~L~~i 79 (80)
T 1bdo_A 12 VGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESG-QPVEFDEPLVVI 79 (80)
T ss_dssp SEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTT-CEECTTCEEEEE
T ss_pred CeEEEEecccCcccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCC-CEECCCCEEEEE
Confidence 367766 5999999999999999999999999999999999999999999 799999999876
No 37
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.23 E-value=2.9e-11 Score=97.61 Aligned_cols=65 Identities=23% Similarity=0.317 Sum_probs=61.7
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEecc
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 74 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~~ 74 (425)
..|+|.+|++++||.|++||+|++++++|+..+|.||++|+|.++.+++| +.|..|++|+.+.+.
T Consensus 21 ~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G-~~V~~G~~L~~i~~~ 85 (99)
T 2ejm_A 21 MTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREG-AQANRHTPLVEFEEE 85 (99)
T ss_dssp SSEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTT-EEECTTCBCEEECCC
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCC-CEECCCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999999 899999999988653
No 38
>1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C*
Probab=99.22 E-value=4.8e-12 Score=88.34 Aligned_cols=41 Identities=41% Similarity=0.741 Sum_probs=38.5
Q ss_pred CcccChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHHH
Q 014404 132 RLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLA 172 (425)
Q Consensus 132 ~~~asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~~ 172 (425)
++.+||+||++|+++||||+.|+|||++|||+++||++|+.
T Consensus 6 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~k~Dv~~~~~ 46 (49)
T 1w85_I 6 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLA 46 (49)
T ss_dssp CCCCCHHHHHHHHHTTCCTTTSCCCSGGGCCCHHHHHHHHC
T ss_pred cccCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHHh
Confidence 45689999999999999999999999999999999999974
No 39
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=99.21 E-value=3.8e-12 Score=89.57 Aligned_cols=41 Identities=44% Similarity=0.610 Sum_probs=37.8
Q ss_pred CcccChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHHH
Q 014404 132 RLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLA 172 (425)
Q Consensus 132 ~~~asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~~ 172 (425)
++.+||+||++|+++||||+.|+|||++|||+++||++|+.
T Consensus 9 ~~~asP~aR~lA~e~gidl~~V~gtG~~GrI~k~DV~~~~~ 49 (51)
T 1bal_A 9 NDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLA 49 (51)
T ss_dssp SCCCCGGGTTHHHHTTCCTTSSCCCSTTSCCCHHHHTTTSC
T ss_pred CCCCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHhc
Confidence 45689999999999999999999999999999999998753
No 40
>2f60_K Pyruvate dehydrogenase protein X component; protein-binding protein, E3BD, protein binding; 1.55A {Homo sapiens} PDB: 2f5z_K
Probab=99.13 E-value=1.5e-11 Score=90.29 Aligned_cols=42 Identities=36% Similarity=0.538 Sum_probs=39.3
Q ss_pred CcccChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHHHh
Q 014404 132 RLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLAS 173 (425)
Q Consensus 132 ~~~asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~~~ 173 (425)
++.+||+||++|+++||||+.|+|||++|||+++||++|++.
T Consensus 9 ~~~asPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~ 50 (64)
T 2f60_K 9 RFRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQL 50 (64)
T ss_dssp HHHBCHHHHHHHHHTTCCGGGSCCCSGGGCBCHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHHhc
Confidence 466899999999999999999999999999999999999864
No 41
>2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens}
Probab=99.12 E-value=6.6e-11 Score=88.53 Aligned_cols=43 Identities=42% Similarity=0.739 Sum_probs=39.9
Q ss_pred CcccChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHHHhc
Q 014404 132 RLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLASR 174 (425)
Q Consensus 132 ~~~asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~~~~ 174 (425)
++++||+||+||+++||||+.|.|||++|||+++||++|+...
T Consensus 15 ~~~aSPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~~ 57 (70)
T 2coo_A 15 KTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQ 57 (70)
T ss_dssp SCCSCHHHHHHHHHHTCCGGGSCCCSTTSCCCHHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHhCCCccccCCCCCCCceeHHHHHHHHhcc
Confidence 4668999999999999999999999999999999999998753
No 42
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.12 E-value=8.8e-11 Score=125.74 Aligned_cols=61 Identities=28% Similarity=0.410 Sum_probs=59.3
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEE
Q 014404 10 EGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 10 eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~ 71 (425)
-|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++| +.|.+|++|+.+
T Consensus 620 ~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~~G~v~~i~~~~G-~~v~~g~~l~~i 680 (681)
T 3n6r_A 620 PGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVVAKINASAG-NSLAVDDVIMEF 680 (681)
T ss_dssp CEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSSSEEEEEECCCTT-CEECTTCEEEEE
T ss_pred cEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCCCeEEEEEEeCCc-CEeCCCCEEEEE
Confidence 4999999999999999999999999999999999999999999999999 799999999976
No 43
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=99.11 E-value=3.4e-11 Score=88.08 Aligned_cols=43 Identities=42% Similarity=0.710 Sum_probs=39.9
Q ss_pred CcccChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHHHhc
Q 014404 132 RLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLASR 174 (425)
Q Consensus 132 ~~~asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~~~~ 174 (425)
++++||+||+||+++||||+.|.|||++|||+++||++|+...
T Consensus 4 ~~~asPaaRklA~e~gidl~~V~gtG~~GrItk~DV~~~~~~~ 46 (62)
T 1w4i_A 4 EVAAMPAARRLAKELGIDLSKVKGTGPGGVITVEDVKRYAEET 46 (62)
T ss_dssp SSEECHHHHHHHHHHTCCGGGSCCCSTTSEECHHHHHHHHHHH
T ss_pred cccCChHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHHhcc
Confidence 4678999999999999999999999999999999999998743
No 44
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=99.09 E-value=1.2e-10 Score=131.22 Aligned_cols=61 Identities=21% Similarity=0.406 Sum_probs=59.3
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEE
Q 014404 10 EGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 10 eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~ 71 (425)
-|+|++|+|++||.|++||+|++||+||++++|+||++|+|.++++++| +.|.+|++|+.|
T Consensus 1175 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G-~~V~~G~~l~~i 1235 (1236)
T 3va7_A 1175 TGRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNG-DMVEAGDLVAVI 1235 (1236)
T ss_dssp CEEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTT-CEECTTCEEEEE
T ss_pred cEEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCc-CEeCCCCEEEEe
Confidence 3999999999999999999999999999999999999999999999999 799999999976
No 45
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=99.04 E-value=2.6e-10 Score=128.15 Aligned_cols=63 Identities=16% Similarity=0.287 Sum_probs=60.1
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 10 EGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 10 eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++| +.|.+|++|+.|..
T Consensus 1085 ~G~v~~~~v~~Gd~V~~G~~l~~ieamK~~~~i~ap~~G~v~~i~v~~G-~~V~~g~~l~~i~~ 1147 (1150)
T 3hbl_A 1085 PGSVTEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNG-DTIATGDLLIEIEK 1147 (1150)
T ss_dssp SEEEEEECCCTTCEECTTCEEEEEESSSCEEEEECSSSEEEEEECCCTT-CEECTTBEEEEEC-
T ss_pred eEEEEEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeEEEEEEeCCC-CEeCCCCEEEEEec
Confidence 4999999999999999999999999999999999999999999999999 79999999998843
No 46
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=99.02 E-value=2.7e-11 Score=129.59 Aligned_cols=63 Identities=22% Similarity=0.335 Sum_probs=0.0
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 10 EGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 10 eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++| +.|.+|++|+.+.+
T Consensus 610 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G-~~v~~g~~l~~i~~ 672 (675)
T 3u9t_A 610 NGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEG-ELVEEGTPLVELDE 672 (675)
T ss_dssp ----------------------------------------------------------------
T ss_pred CEEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCc-CCcCCCCEEEEEec
Confidence 4999999999999999999999999999999999999999999999999 79999999998843
No 47
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.80 E-value=4e-09 Score=87.31 Aligned_cols=66 Identities=24% Similarity=0.330 Sum_probs=59.9
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEeccee-----------------------------eEEecCCCeEEEEEEecCCC
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDKAT-----------------------------VEMECMEEGYLAKIVKGDGS 59 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~-----------------------------~~i~a~~~G~v~~~~~~~g~ 59 (425)
..|+|.+|+|++||.|++||+|+++++.++. ..|.||++|+|.++.+++|
T Consensus 8 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G- 86 (116)
T 2k32_A 8 VSGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDALVNIG- 86 (116)
T ss_dssp SCEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCSCCTT-
T ss_pred CCEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEECCCC-
Confidence 4699999999999999999999999998665 4899999999999999999
Q ss_pred eeeeCC-CEEEEEeccc
Q 014404 60 KEIKVG-EVIAITVEEE 75 (425)
Q Consensus 60 ~~v~~g-~~l~~~~~~~ 75 (425)
+.|..| ++|+.+.+.+
T Consensus 87 ~~v~~g~~~l~~i~~~~ 103 (116)
T 2k32_A 87 DYVSASTTELVRVTNLN 103 (116)
T ss_dssp CEECTTTSCCEEEECSC
T ss_pred CEEcCCCcEEEEEECCC
Confidence 799999 9999887643
No 48
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=98.80 E-value=4.9e-09 Score=88.86 Aligned_cols=62 Identities=21% Similarity=0.282 Sum_probs=54.6
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEecCCCeEEEEE---EecCCCeeee---CCC-EEEEEec
Q 014404 11 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKI---VKGDGSKEIK---VGE-VIAITVE 73 (425)
Q Consensus 11 g~i~~~~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~---~~~~g~~~v~---~g~-~l~~~~~ 73 (425)
|.|+.+.+ ++||.|++||+||+||+||+..+|.||.+|+|.++ ++++| +.|. .|+ .|+.+..
T Consensus 45 G~i~~V~lp~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p-~~Vn~dp~g~GwL~~i~~ 114 (136)
T 1zko_A 45 GDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEP-ELINKDPEGEGWLFKMEI 114 (136)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCT-THHHHCTTTTTCCEEEEE
T ss_pred CCcEEEEecCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCc-cCcccCCCCCeEEEEEEE
Confidence 34566656 99999999999999999999999999999999999 88899 6888 888 8887754
No 49
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=98.79 E-value=1.8e-09 Score=115.16 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=59.0
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEE
Q 014404 10 EGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 10 eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~ 71 (425)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++.+++| +.|..|++|+.+
T Consensus 657 ~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G-~~V~~G~~L~~i 717 (718)
T 3bg3_A 657 PGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKD-MTLEGDDLILEI 717 (718)
T ss_dssp CEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSE-EEECSSCEEECB
T ss_pred CeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCC-CEeCCCCEEEEe
Confidence 6999999999999999999999999999999999999999999999999 899999999865
No 50
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=98.72 E-value=6.2e-09 Score=117.28 Aligned_cols=61 Identities=25% Similarity=0.484 Sum_probs=53.2
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEE
Q 014404 10 EGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 10 eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~ 71 (425)
.|+|++|+|++||.|++||+|+++|+||++++|+||.+|+|.++.+++| +.|..|++|+.+
T Consensus 1103 ~G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~i~Ap~~G~V~~i~v~~G-~~V~~g~~l~~i 1163 (1165)
T 2qf7_A 1103 PGVISRVFVSSGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAG-DQIDAKDLLAVY 1163 (1165)
T ss_dssp CEEEEEECCSSCCCC---CEEEEEEC---CEEEECCSSCCCCEECCCSS-CEECTTBEEEEC
T ss_pred CeEEEEEEcCCcCEeCCCCEEEEEEcccceEEEEcCCCEEEEEEEeCCC-CEECCCCEEEEe
Confidence 5999999999999999999999999999999999999999999999999 799999999876
No 51
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.42 E-value=2e-07 Score=78.48 Aligned_cols=48 Identities=23% Similarity=0.245 Sum_probs=43.0
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCC
Q 014404 11 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDG 58 (425)
Q Consensus 11 g~i~~~~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g 58 (425)
|.|+.+.+ ++|+.|++||+||+||+||+..+|.||.+|+|.++..+.+
T Consensus 36 G~i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~ 84 (131)
T 1hpc_A 36 GEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLT 84 (131)
T ss_dssp CSEEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHH
T ss_pred CCceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhh
Confidence 45777777 9999999999999999999999999999999999975544
No 52
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.39 E-value=2.9e-07 Score=77.24 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=42.3
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCC
Q 014404 11 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDG 58 (425)
Q Consensus 11 g~i~~~~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g 58 (425)
|.|+.+.+ ++|+.|++||+||+||++|+..+|.||.+|+|.++..+.+
T Consensus 37 G~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~ 85 (128)
T 3a7l_A 37 GDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALS 85 (128)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGG
T ss_pred CceEEEEecCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhc
Confidence 44666666 9999999999999999999999999999999999976443
No 53
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.38 E-value=3.4e-07 Score=76.81 Aligned_cols=61 Identities=20% Similarity=0.206 Sum_probs=48.4
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEec---CCCeee---eCCC-EEEEEe
Q 014404 11 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKG---DGSKEI---KVGE-VIAITV 72 (425)
Q Consensus 11 g~i~~~~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~---~g~~~v---~~g~-~l~~~~ 72 (425)
|.|+.+.+ ++|+.|++||++|+||++|+..+|.||.+|+|.++..+ .. +.+ +.|+ -|+.+.
T Consensus 36 G~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P-~lvn~dpy~~gWl~~i~ 104 (128)
T 1onl_A 36 GDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTP-ELVNQDPYGEGWIFRLK 104 (128)
T ss_dssp CSEEEEECBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCT-THHHHCTTTTTCCEEEE
T ss_pred CCceEEEecCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccCh-hhhccCCCCCccEEEEE
Confidence 34666665 99999999999999999999999999999999999754 33 234 4555 666554
No 54
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=97.96 E-value=1.1e-05 Score=66.92 Aligned_cols=46 Identities=24% Similarity=0.276 Sum_probs=41.2
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEec
Q 014404 11 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKG 56 (425)
Q Consensus 11 g~i~~~~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~ 56 (425)
|.|+.+.. ++|+.|++||+++.||++|+..+|.||.+|+|.++...
T Consensus 32 Gdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~ 78 (125)
T 3klr_A 32 GDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKA 78 (125)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGG
T ss_pred CCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhh
Confidence 56777766 79999999999999999999999999999999988644
No 55
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=97.89 E-value=1.7e-05 Score=79.85 Aligned_cols=65 Identities=20% Similarity=0.261 Sum_probs=57.8
Q ss_pred ceEEEEEEEc-CCCCeecCCCeEEEEEec------------------------------------------------cee
Q 014404 9 QEGNIARWLK-KEGDKVSPGEVLCEVETD------------------------------------------------KAT 39 (425)
Q Consensus 9 ~eg~i~~~~v-~~Gd~V~~g~~l~~vet~------------------------------------------------K~~ 39 (425)
..|.|.+++| ++||.|++||+|+++++. ...
T Consensus 128 ~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~~~~~~~~ 207 (413)
T 3ne5_B 128 AAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTR 207 (413)
T ss_dssp SCEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCCCE
T ss_pred cCEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccc
Confidence 4699999999 999999999999999951 235
Q ss_pred eEEecCCCeEEEEEEecCCCeeeeCCCEEEEEecc
Q 014404 40 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 74 (425)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~~ 74 (425)
..|.||++|+|.++.+++| +.|..|++|+.|.+.
T Consensus 208 ~~I~AP~~G~V~~~~v~~G-~~V~~G~~l~~I~~~ 241 (413)
T 3ne5_B 208 FTLKAPIDGVITAFDLRAG-MNIAKDNVVAKIQGM 241 (413)
T ss_dssp EEEECSSSEEEEECCCCTT-CEECTTSCSEEEEEE
T ss_pred EEEEcCCCeEEEEEEcCCC-CEECCCCcEEEEeCC
Confidence 6899999999999999999 799999999988754
No 56
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.84 E-value=2.3e-05 Score=66.30 Aligned_cols=46 Identities=24% Similarity=0.308 Sum_probs=40.4
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEec
Q 014404 11 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKG 56 (425)
Q Consensus 11 g~i~~~~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~ 56 (425)
|.|+.+.. ++|+.|++||+++.||++|+..+|.||.+|+|.++.-+
T Consensus 54 GdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~ 100 (143)
T 3mxu_A 54 GDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAA 100 (143)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGG
T ss_pred CCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhh
Confidence 45666655 89999999999999999999999999999999988643
No 57
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=97.83 E-value=1.9e-05 Score=77.77 Aligned_cols=65 Identities=17% Similarity=0.267 Sum_probs=57.8
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecce--------------------------------------------------
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDKA-------------------------------------------------- 38 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~-------------------------------------------------- 38 (425)
..|+|.+++|++||.|++||+|+++++...
T Consensus 64 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a 143 (359)
T 3lnn_A 64 LAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAAS 143 (359)
T ss_dssp SCEEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999987532
Q ss_pred --------------------------eeEEecCCCeEEEEEEecCCCeeeeC-CCEEEEEecc
Q 014404 39 --------------------------TVEMECMEEGYLAKIVKGDGSKEIKV-GEVIAITVEE 74 (425)
Q Consensus 39 --------------------------~~~i~a~~~G~v~~~~~~~g~~~v~~-g~~l~~~~~~ 74 (425)
...|.||++|+|..+.+..| +.+.. |++|+.+.+.
T Consensus 144 ~l~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G-~~v~~~g~~l~~i~~~ 205 (359)
T 3lnn_A 144 ESQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATG-AYWNDTTASLMTVADL 205 (359)
T ss_dssp HHHHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBT-CEECCSSCCSEEEECC
T ss_pred HHHHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCC-ceeCCCCcceEEEecC
Confidence 35799999999999999999 79998 9999988764
No 58
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.80 E-value=2.5e-05 Score=65.81 Aligned_cols=44 Identities=25% Similarity=0.368 Sum_probs=39.5
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEE
Q 014404 11 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIV 54 (425)
Q Consensus 11 g~i~~~~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~ 54 (425)
|.|+.+.. ++|+.|++||+++.||++|+..+|.||.+|+|.++.
T Consensus 49 Gdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN 93 (137)
T 3tzu_A 49 GDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVN 93 (137)
T ss_dssp CSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEEC
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEeh
Confidence 45666655 899999999999999999999999999999999885
No 59
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=97.79 E-value=6.5e-06 Score=78.08 Aligned_cols=65 Identities=20% Similarity=0.272 Sum_probs=56.8
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecc---------------------------------------------------
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDK--------------------------------------------------- 37 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K--------------------------------------------------- 37 (425)
..|+|.+|+|++||.|++||+|+++++..
T Consensus 29 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~ 108 (277)
T 2f1m_A 29 VSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQ 108 (277)
T ss_dssp SCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHH
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHH
Confidence 45999999999999999999999998731
Q ss_pred --------------------eeeEEecCCCeEEEEEEecCCCeeeeCC--CEEEEEecc
Q 014404 38 --------------------ATVEMECMEEGYLAKIVKGDGSKEIKVG--EVIAITVEE 74 (425)
Q Consensus 38 --------------------~~~~i~a~~~G~v~~~~~~~g~~~v~~g--~~l~~~~~~ 74 (425)
....|.||++|+|..+.+++| +.|..| ++|+.+.+.
T Consensus 109 ~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G-~~v~~g~~~~l~~i~~~ 166 (277)
T 2f1m_A 109 QANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEG-ALVQNGQATALATVQQL 166 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBT-CEECTTCSSCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCC-CEEcCCCCceeEEEecC
Confidence 124799999999999999999 799999 589888664
No 60
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=97.77 E-value=2.1e-05 Score=76.80 Aligned_cols=65 Identities=15% Similarity=0.241 Sum_probs=56.2
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecc---------------------------------------------------
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDK--------------------------------------------------- 37 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K--------------------------------------------------- 37 (425)
..|+|.+++|++||.|++||+|+++++.-
T Consensus 38 ~~G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 117 (341)
T 3fpp_A 38 VSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLD 117 (341)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHH
T ss_pred CCcEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHH
Confidence 45999999999999999999999998741
Q ss_pred ----------------------------------eeeEEecCCCeEEEEEEecCCCeeeeCCCE---EEEEecc
Q 014404 38 ----------------------------------ATVEMECMEEGYLAKIVKGDGSKEIKVGEV---IAITVEE 74 (425)
Q Consensus 38 ----------------------------------~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~---l~~~~~~ 74 (425)
....|.||++|+|.++.+..| +.|..|++ |+.+.+.
T Consensus 118 ~a~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G-~~v~~g~~~~~l~~i~~~ 190 (341)
T 3fpp_A 118 NAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQG-QTVIAAQQAPNILTLADM 190 (341)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTT-CEECCTTSCCCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCC-CEEecCCCCceEEEEecC
Confidence 115699999999999999999 79999987 8877653
No 61
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=97.59 E-value=9.7e-05 Score=63.25 Aligned_cols=44 Identities=23% Similarity=0.327 Sum_probs=39.0
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEE
Q 014404 11 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIV 54 (425)
Q Consensus 11 g~i~~~~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~ 54 (425)
|.|+.+.. ++|+.|++||++++||+.|+..+|.||.+|+|.++.
T Consensus 59 GdIvfVeLP~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN 103 (155)
T 3hgb_A 59 GDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVN 103 (155)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEEC
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEh
Confidence 44555544 799999999999999999999999999999999885
No 62
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=97.48 E-value=3.4e-05 Score=76.44 Aligned_cols=65 Identities=20% Similarity=0.305 Sum_probs=56.4
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecc---------------------------------------------------
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDK--------------------------------------------------- 37 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K--------------------------------------------------- 37 (425)
..|+|.+++|++||.|++||+|+++++..
T Consensus 50 v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~a~a~l~ 129 (369)
T 1vf7_A 50 VNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVE 129 (369)
T ss_dssp SCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999999998632
Q ss_pred ------eeeEEecCCCeEEEEEEecCCCeeeeCC--CEEEEEecc
Q 014404 38 ------ATVEMECMEEGYLAKIVKGDGSKEIKVG--EVIAITVEE 74 (425)
Q Consensus 38 ------~~~~i~a~~~G~v~~~~~~~g~~~v~~g--~~l~~~~~~ 74 (425)
....|.||++|+|.++.++.| +.|..| ++|+.|.+.
T Consensus 130 ~a~~~l~~~~I~AP~~G~V~~~~v~~G-~~V~~g~g~~l~~i~~~ 173 (369)
T 1vf7_A 130 QARINLRYTKVLSPISGRIGRSAVTEG-ALVTNGQANAMATVQQL 173 (369)
T ss_dssp HHHHHHHTTEEECSSSEEECCCSSCBT-CEECTTCSSCSEEEECC
T ss_pred HHHHhhcCCEEECCCCeEEEEEEcCCC-CeEcCCCCceeEEEecC
Confidence 125799999999999999999 799995 899988653
No 63
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=96.94 E-value=3.9e-05 Score=75.66 Aligned_cols=64 Identities=17% Similarity=0.370 Sum_probs=54.1
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecce--------------------------------------------------
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDKA-------------------------------------------------- 38 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K~-------------------------------------------------- 38 (425)
..|+|.+++|++||.|++||+|+++++...
T Consensus 39 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 118 (369)
T 4dk0_A 39 VSGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLN 118 (369)
T ss_dssp SCSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHH
T ss_pred CCcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHH
Confidence 459999999999999999999999987420
Q ss_pred -----------------------------------eeEEecCCCeEEEEEEecCCCeeeeCCCE---EEEEec
Q 014404 39 -----------------------------------TVEMECMEEGYLAKIVKGDGSKEIKVGEV---IAITVE 73 (425)
Q Consensus 39 -----------------------------------~~~i~a~~~G~v~~~~~~~g~~~v~~g~~---l~~~~~ 73 (425)
...|.||++|+|.++.++.| +.|..|++ |+.+.+
T Consensus 119 ~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G-~~v~~g~~~~~l~~i~~ 190 (369)
T 4dk0_A 119 TAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEG-QTVNSNQTTPTIIKVAD 190 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTT-CBCCTTTSCCCCBBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCC-CCccCCCCcceEEEEcC
Confidence 13499999999999999999 79999998 555433
No 64
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=96.53 E-value=0.0061 Score=59.27 Aligned_cols=58 Identities=22% Similarity=0.260 Sum_probs=48.9
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe----cceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 13 IARWLKKEGDKVSPGEVLCEVET----DKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 13 i~~~~v~~Gd~V~~g~~l~~vet----~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
+.+..++.||.|++||+|++|.. .....+|.||++|+|..... . -.|..|+.|+.+..
T Consensus 267 l~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~~~~--~-~~V~~G~~l~~Ia~ 328 (331)
T 3na6_A 267 LFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRHF--P-GMIKSGDCAAVIGV 328 (331)
T ss_dssp EEEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEEEEC--S-SEECTTCEEEEEEC
T ss_pred EEEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEEEeC--C-CccCCCCEEEEEec
Confidence 66778999999999999999987 35678999999999976653 3 37899999998854
No 65
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=96.33 E-value=0.0098 Score=58.35 Aligned_cols=59 Identities=19% Similarity=0.250 Sum_probs=51.0
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe----cceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEecc
Q 014404 13 IARWLKKEGDKVSPGEVLCEVET----DKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 74 (425)
Q Consensus 13 i~~~~v~~Gd~V~~g~~l~~vet----~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~~ 74 (425)
+.+..++.||.|++||+|+.|+. .+...+|.||.+|+|.... .. ..|..|+.|+.+...
T Consensus 277 ~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~~--~~-~~V~~Gd~l~~ia~~ 339 (354)
T 3cdx_A 277 LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFGA--GP-GRVTRGDAVAVVMED 339 (354)
T ss_dssp EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEEE--CS-SEECTTCEEEEEEEE
T ss_pred EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEEe--CC-CccCCCCEEEEEeee
Confidence 67888999999999999999997 4788999999999998664 55 589999999988653
No 66
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=96.29 E-value=0.01 Score=58.45 Aligned_cols=58 Identities=12% Similarity=0.166 Sum_probs=49.0
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe------cceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 13 IARWLKKEGDKVSPGEVLCEVET------DKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 13 i~~~~v~~Gd~V~~g~~l~~vet------~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
+.+..++.||.|++||+|++|-. .....+|.||.+|+|.-.. .. -.|..|+.|+.|..
T Consensus 300 l~~~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi~~~--~~-p~V~~G~~l~~i~~ 363 (368)
T 3fmc_A 300 MVEYLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPILHF--AS-ASVHQGTELYKVMT 363 (368)
T ss_dssp EEEECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEEEEC--SS-SEECTTCEEEEEEE
T ss_pred EEEEeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEEEEe--CC-CccCCCCEEEEEee
Confidence 55689999999999999999987 4577899999999997654 44 47999999998754
No 67
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.29 E-value=0.002 Score=51.28 Aligned_cols=46 Identities=17% Similarity=0.253 Sum_probs=41.3
Q ss_pred CCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 27 GEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 27 g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
|..+|.++.++-...|.||.+|+|.++++++| +.|+.||+|+.+..
T Consensus 5 ~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~G-d~V~~Gq~L~~le~ 50 (100)
T 2dn8_A 5 SSGTCVFEKENDPTVLRSPSAGKLTQYTVEDG-GHVEAGSSYAEMEV 50 (100)
T ss_dssp CCCCCCCCCCCCTTEEECSSCEEEEEESSCTT-EEECTTCEEEEEEE
T ss_pred CCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCc-CEECCCCEEEEEEe
Confidence 55668888888889999999999999999999 89999999998853
No 68
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=95.35 E-value=0.016 Score=42.63 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=29.1
Q ss_pred EEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 41 EMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 41 ~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
+|.||.+|+|.++++++| +.|+.|++|+.+..
T Consensus 1 ~v~a~~~G~v~~~~v~~G-~~V~~G~~l~~i~~ 32 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAG-DQIEKGQEVAILES 32 (72)
T ss_dssp CEECCSSEEEEEECCCTT-CEECTTCEEEEEEE
T ss_pred CEECcccEEEEEEEcCCc-CEECCCCEEEEEEC
Confidence 378999999999999999 79999999999854
No 69
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=95.30 E-value=0.019 Score=42.75 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=30.7
Q ss_pred eeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 39 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
...|.||.+|+|.++++++| +.|+.|++|+.+..
T Consensus 8 ~~~v~a~~~G~v~~~~v~~G-~~V~~G~~L~~l~~ 41 (77)
T 1dcz_A 8 EGEIPAPLAGTVSKILVKEG-DTVKAGQTVLVLEA 41 (77)
T ss_dssp SSEEEBSSSCEEEEECCCTT-CEECTTSEEEEEEE
T ss_pred CeEEECCCCEEEEEEEcCCc-CEEcCCCEEEEEEc
Confidence 35789999999999999999 79999999998854
No 70
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=95.15 E-value=0.024 Score=41.69 Aligned_cols=33 Identities=12% Similarity=0.240 Sum_probs=30.0
Q ss_pred eEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 40 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
..|.||.+|+|.++++++| +.|+.||+|+.+..
T Consensus 6 ~~v~a~~~G~v~~~~v~~G-~~V~~G~~l~~i~~ 38 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVG-DRVRVGQGLLVLEA 38 (74)
T ss_dssp CEEECSSCEEEEEECCCTT-CEECTTCEEEEEEE
T ss_pred eEEecCCCEEEEEEEcCCC-CEeCCCCEEEEEec
Confidence 4688999999999999999 79999999998854
No 71
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=95.02 E-value=0.021 Score=49.33 Aligned_cols=58 Identities=24% Similarity=0.339 Sum_probs=50.0
Q ss_pred ceEEEEEEEcCCCCeecC----CCeEEEEEecceeeEEecCCCeEEEEE-------------------------------
Q 014404 9 QEGNIARWLKKEGDKVSP----GEVLCEVETDKATVEMECMEEGYLAKI------------------------------- 53 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~----g~~l~~vet~K~~~~i~a~~~G~v~~~------------------------------- 53 (425)
-.|+|+.+. ++.|.|-. |+.++...++ ..+.||++|+|..+
T Consensus 19 ~~G~vv~l~-~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidTV~l~G~ 94 (161)
T 1f3z_A 19 LSGEIVNIE-DVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE 94 (161)
T ss_dssp SCEEEEEGG-GSSSHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTT
T ss_pred CCeEEEEeE-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccchhcCCC
Confidence 358898876 78888877 8999988776 47899999999988
Q ss_pred ----EecCCCeeeeCCCEEEEE
Q 014404 54 ----VKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 54 ----~~~~g~~~v~~g~~l~~~ 71 (425)
++++| |.|+.||+|+.+
T Consensus 95 gF~~~V~~G-d~V~~G~~L~~~ 115 (161)
T 1f3z_A 95 GFKRIAEEG-QRVKVGDTVIEF 115 (161)
T ss_dssp TEEECSCTT-CEECTTCEEEEE
T ss_pred ccEEEEeCc-CEECCCCEEEEE
Confidence 88999 799999999987
No 72
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=94.72 E-value=0.029 Score=45.45 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=30.4
Q ss_pred eEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 40 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
+.|.|+.+|+|.++++++| +.|+.|++|+.+..
T Consensus 2 ~~v~a~~~G~V~~v~v~~G-~~V~~Gq~L~~ld~ 34 (116)
T 2k32_A 2 VIIKPQVSGVIVNKLFKAG-DKVKKGQTLFIIEQ 34 (116)
T ss_dssp EEECCSSCEEEEEECSCTT-SEECTTCEEEEEEC
T ss_pred eEEeCcCCEEEEEEECCCc-CEECCCCEEEEECH
Confidence 6789999999999999999 79999999999854
No 73
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=94.63 E-value=0.1 Score=50.52 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=48.0
Q ss_pred EEEEEEcCCCCeecCCCeEEEEEe----cceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 12 NIARWLKKEGDKVSPGEVLCEVET----DKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 12 ~i~~~~v~~Gd~V~~g~~l~~vet----~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
-+....++.|+.|++||+|+++-. .....+|.||.+|+|.-.. .. -.|..|+.|+.+..
T Consensus 266 G~~~~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~~~~--~~-p~V~~Gd~l~~ia~ 328 (332)
T 2qj8_A 266 GIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAIR--SA-MYVQGNEEVAILAR 328 (332)
T ss_dssp EEEEECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEEEEE--CS-EEECTTCEEEEEEE
T ss_pred eEEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEEEEe--CC-CeeCCCCEEEEEee
Confidence 355678899999999999999954 4677889999999997554 44 57899999988754
No 74
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=94.55 E-value=0.025 Score=43.19 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=30.2
Q ss_pred eEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 40 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
..|.||.+|+|.++++++| +.|..||+|+.+..
T Consensus 6 ~~v~a~~~G~v~~~~v~~G-d~V~~G~~l~~ie~ 38 (84)
T 2kcc_A 6 TVLRSPSAGKLTQYTVEDG-GHVEAGSSYAEMEV 38 (84)
T ss_dssp TEECCSSSCCEEEESSCTT-EEECTTCEEEEEEC
T ss_pred ceEECCCCEEEEEEECCCC-CEECCCCEEEEEEe
Confidence 4689999999999999999 89999999998853
No 75
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=94.42 E-value=0.03 Score=48.04 Aligned_cols=58 Identities=16% Similarity=0.214 Sum_probs=49.2
Q ss_pred ceEEEEEEEcCCCCeecC----CCeEEEEEecceeeEEecCCCeEEEE--------------------------------
Q 014404 9 QEGNIARWLKKEGDKVSP----GEVLCEVETDKATVEMECMEEGYLAK-------------------------------- 52 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~----g~~l~~vet~K~~~~i~a~~~G~v~~-------------------------------- 52 (425)
-.|+|+.+. ++.|.|-. |+.++...++ ..+.||++|+|..
T Consensus 14 ~~G~vv~l~-~v~D~vf~~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGidTv~l~G~ 89 (154)
T 2gpr_A 14 CDGTIITLD-EVEDEVFKERMLGDGFAINPKS---NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDTVSLDGN 89 (154)
T ss_dssp SSEEEECGG-GSSCHHHHTTSSCEEEEEEESS---SEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSGGGGTTC
T ss_pred CCeEEEEee-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcchhhcCCC
Confidence 358888875 88888877 8899988876 5899999999997
Q ss_pred ---EEecCCCeeeeCCCEEEEE
Q 014404 53 ---IVKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 53 ---~~~~~g~~~v~~g~~l~~~ 71 (425)
+++++| |.|+.||+|+.+
T Consensus 90 gF~~~V~~G-d~V~~G~~L~~~ 110 (154)
T 2gpr_A 90 GFESFVTQD-QEVNAGDKLVTV 110 (154)
T ss_dssp SEEECCCTT-CEECTTCEEEEE
T ss_pred ceEEEEcCC-CEEcCCCEEEEE
Confidence 488999 799999999987
No 76
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=93.87 E-value=0.031 Score=48.37 Aligned_cols=58 Identities=14% Similarity=0.207 Sum_probs=49.3
Q ss_pred ceEEEEEEEcCCCCeecC----CCeEEEEEecceeeEEecCCCeEEEEE-------------------------------
Q 014404 9 QEGNIARWLKKEGDKVSP----GEVLCEVETDKATVEMECMEEGYLAKI------------------------------- 53 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~----g~~l~~vet~K~~~~i~a~~~G~v~~~------------------------------- 53 (425)
-.|+|+.+ .++.|.|-. |+.++...+ ...+.||++|+|..+
T Consensus 19 ~~G~vv~l-~~v~D~vfs~~~~G~Giai~p~---~~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHIGidTV~l~G~ 94 (162)
T 1ax3_A 19 ITGEIHPI-TDVPDQVFSGKMMGDGFAILPS---EGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGE 94 (162)
T ss_dssp CSEEEEEG-GGSSSHHHHTCTTSEEEEEEEC---SSEEEESCCEEEEECCSSSSEEEEESSSSCEEEEECSSSTTTTTTT
T ss_pred CceEEEEe-EECCCccccccceeceEEEEeC---CCcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECccchhcCCC
Confidence 45999997 778888877 888987776 457899999999988
Q ss_pred ----EecCCCeeeeCCCEEEEE
Q 014404 54 ----VKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 54 ----~~~~g~~~v~~g~~l~~~ 71 (425)
++++| |.|+.|++|+.+
T Consensus 95 gF~~~V~~G-d~V~~G~~L~~~ 115 (162)
T 1ax3_A 95 GFTSFVSEG-DRVEPGQKLLEV 115 (162)
T ss_dssp TEEESCCCC-SEECSEEEEEEE
T ss_pred ccEEEEeCC-CEEcCCCEEEEE
Confidence 88899 799999999987
No 77
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=93.83 E-value=0.055 Score=47.85 Aligned_cols=32 Identities=16% Similarity=0.362 Sum_probs=27.7
Q ss_pred EEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEE
Q 014404 15 RWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAK 52 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~ 52 (425)
.++|+.|+.|++||.||+-. .|-+..+|+|..
T Consensus 22 ~L~V~dG~~VkkG~~laeWD------PIitE~~G~V~d 53 (193)
T 2xha_A 22 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVD 53 (193)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEE
T ss_pred EEEECCCCEEcCCCEEEEeC------cEEEccCEEEEe
Confidence 57899999999999999765 788889998854
No 78
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=93.05 E-value=0.087 Score=41.48 Aligned_cols=34 Identities=15% Similarity=0.278 Sum_probs=30.6
Q ss_pred eeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 39 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
...|.|+.+|+|.++++++| +.|+.||+|+.+..
T Consensus 14 ~~~v~a~~~G~v~~~~v~~G-d~V~~Gq~L~~ie~ 47 (99)
T 2ejm_A 14 QGGPLAPMTGTIEKVFVKAG-DKVKAGDSLMVMIA 47 (99)
T ss_dssp CSSCBCSSSEEEEEECCCTT-EEECSSCEEEEEES
T ss_pred ceEEecCCCEEEEEEECCCC-CEECCCCEEEEEEc
Confidence 45688999999999999999 89999999998854
No 79
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=92.67 E-value=0.1 Score=48.73 Aligned_cols=52 Identities=15% Similarity=0.075 Sum_probs=38.3
Q ss_pred CCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEe
Q 014404 19 KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 72 (425)
Q Consensus 19 ~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~ 72 (425)
+.|+.-..=..-+.|+.. -...|.++.+|+|.++++++| +.|+.|++|+.+.
T Consensus 3 ~~~~~~~~v~~~G~v~~~-~~~~v~a~~~G~V~~v~v~~G-~~V~kGq~L~~ld 54 (277)
T 2f1m_A 3 KTEPLQITTELPGRTSAY-RIAEVRPQVSGIILKRNFKEG-SDIEAGVSLYQID 54 (277)
T ss_dssp -------CCEEEEEEECS-EEEEECCSSCEEEEEECSCTT-CEECTTSCSEEEC
T ss_pred eeeccceEEEEEEEEEee-eEEEEEccccEEEEEEEcCCC-CEecCCCEEEEEC
Confidence 334444444456678875 467899999999999999999 7999999999884
No 80
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=92.48 E-value=0.16 Score=43.48 Aligned_cols=45 Identities=20% Similarity=0.182 Sum_probs=40.1
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeE-EecCCCeEEEEEE
Q 014404 10 EGNIARWLKKEGDKVSPGEVLCEVETDKATVE-MECMEEGYLAKIV 54 (425)
Q Consensus 10 eg~i~~~~v~~Gd~V~~g~~l~~vet~K~~~~-i~a~~~G~v~~~~ 54 (425)
||..+-..+.+|+.|.+|+.|+-|.|-|-++- +.||++|+|.=+.
T Consensus 108 eG~~V~~i~~~G~rV~kgd~lA~i~T~KGEVR~i~spv~G~Vv~v~ 153 (169)
T 3d4r_A 108 EGYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMN 153 (169)
T ss_dssp CSSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEE
T ss_pred CceEEEEEcCcCcEeccCCeEEEEEecCceEEEecCCCcEEEEEEE
Confidence 56677788999999999999999999999987 8999999997554
No 81
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=92.41 E-value=0.12 Score=38.39 Aligned_cols=27 Identities=33% Similarity=0.576 Sum_probs=24.9
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEe
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet 35 (425)
..|+|.++++++||.|..|++|+.+++
T Consensus 51 ~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (77)
T 2l5t_A 51 VRGKIVKILYREGQVVPVGSTLLQIDT 77 (77)
T ss_dssp CCEEEEEECCCTTCEECSCSEEEEEEC
T ss_pred CCEEEEEEEeCCcCEECCCCEEEEEEC
Confidence 369999999999999999999999875
No 82
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=92.41 E-value=0.057 Score=42.15 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=30.5
Q ss_pred eeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 39 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
...|.||.+|+|.++++++| +.|+.||+|+.+..
T Consensus 25 ~~~v~a~~~G~v~~~~v~~G-d~V~~Gq~L~~ie~ 58 (94)
T 2jku_A 25 SSVLRSPMPGVVVAVSVKPG-DAVAEGQEICVIEA 58 (94)
T ss_dssp CCCCCCSSSCEEEEECCCTT-CCCCTTCCCEEEEC
T ss_pred ceEEECCCCEEEEEEECCCC-CEEcCCCEEEEEec
Confidence 45688999999999999999 79999999998854
No 83
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=91.82 E-value=0.1 Score=39.14 Aligned_cols=33 Identities=15% Similarity=0.237 Sum_probs=29.7
Q ss_pred eEEecCCCeEEEEE-------EecCCCeeeeCCCEEEEEec
Q 014404 40 VEMECMEEGYLAKI-------VKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 40 ~~i~a~~~G~v~~~-------~~~~g~~~v~~g~~l~~~~~ 73 (425)
..|.||..|+|.++ ++++| +.|+.||+|+.+..
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G-~~V~~G~~l~~ie~ 44 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVG-QKVNVGDTLCIVEA 44 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTT-CEECTTCEEEEEEE
T ss_pred eEEEcCCCeEEEEecccCcccccCCc-CEECCCCEEEEEEe
Confidence 46899999999998 89999 79999999998854
No 84
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=90.71 E-value=0.22 Score=48.45 Aligned_cols=32 Identities=16% Similarity=0.362 Sum_probs=27.4
Q ss_pred EEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEE
Q 014404 15 RWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAK 52 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~ 52 (425)
.++|+.|+.|++||.||+-. .|-|..+|+|..
T Consensus 62 ~l~v~~g~~V~~g~~la~wd------pii~e~~G~v~~ 93 (352)
T 2xhc_A 62 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVD 93 (352)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEE
T ss_pred EEEecCCCEEcCCCEEEEec------cEEEecceEEEe
Confidence 67899999999999999875 788888888754
No 85
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=90.66 E-value=0.26 Score=47.81 Aligned_cols=53 Identities=21% Similarity=0.243 Sum_probs=41.7
Q ss_pred CCCeecCCCeEEEEEec-ceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 20 EGDKVSPGEVLCEVETD-KATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 20 ~Gd~V~~g~~l~~vet~-K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
.|+.-..-..-+.|+.+ .-...|.++.+|+|.++++++| +.|+.|++|+.+..
T Consensus 37 ~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G-~~V~kGq~L~~ld~ 90 (359)
T 3lnn_A 37 RETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLG-DEVKAGDVLFTIDS 90 (359)
T ss_dssp EEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTT-CEECTTCEEEEEEC
T ss_pred ecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCC-CEEcCCCEEEEECh
Confidence 33333333455677775 6678999999999999999999 79999999999854
No 86
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=90.46 E-value=0.21 Score=37.21 Aligned_cols=27 Identities=41% Similarity=0.633 Sum_probs=24.8
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEe
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet 35 (425)
..|+|.++++++||.|..|++|+.++.
T Consensus 51 ~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 51 ADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp SCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 369999999999999999999999875
No 87
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=90.41 E-value=0.25 Score=47.53 Aligned_cols=55 Identities=13% Similarity=0.222 Sum_probs=42.2
Q ss_pred EcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 17 LKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
.++.|+.-..=..-+.|+..+ ...|.++.+|+|.++++++| +.|+.|++|+.+..
T Consensus 10 ~v~~~~~~~~v~~~G~v~~~~-~~~v~~~~~G~V~~v~v~~G-~~V~kG~~L~~ld~ 64 (341)
T 3fpp_A 10 IVRPGDLQQSVLATGKLDALR-KVDVGAQVSGQLKTLSVAIG-DKVKKDQLLGVIDP 64 (341)
T ss_dssp ---CCCCCCEEEEEEEEEESS-EEECCCSSCEEEEEECCCTT-CEECTTCEEEEECC
T ss_pred EEEEeceeEEEEEEEEEEeeE-EEEEeccCCcEEEEEEeCCC-CEECCCCEEEEECh
Confidence 345555544445566777764 67899999999999999999 79999999999843
No 88
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=90.06 E-value=0.18 Score=37.72 Aligned_cols=28 Identities=25% Similarity=0.378 Sum_probs=25.4
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEec
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETD 36 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~ 36 (425)
..|+|.++++++|+.|..|++|+.|+..
T Consensus 50 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 77 (80)
T 1qjo_A 50 FAGVVKELKVNVGDKVKTGSLIMIFEVE 77 (80)
T ss_dssp SCEEEEECCCCTTCEECTTCCCEEEESC
T ss_pred CCEEEEEEecCCCCEECCCCEEEEEEcc
Confidence 3599999999999999999999999864
No 89
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=89.68 E-value=0.24 Score=37.82 Aligned_cols=29 Identities=34% Similarity=0.585 Sum_probs=25.9
Q ss_pred ceEEEEEEEcCCCC-eecCCCeEEEEEecc
Q 014404 9 QEGNIARWLKKEGD-KVSPGEVLCEVETDK 37 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd-~V~~g~~l~~vet~K 37 (425)
..|+|.++++++|+ .|..|++|+.++...
T Consensus 55 ~~G~v~~~~v~~G~~~V~~G~~l~~i~~~~ 84 (87)
T 3crk_C 55 EEGYLAKILVPEGTRDVPLGTPLCIIVEKE 84 (87)
T ss_dssp SCEEEEEESSCTTCCCEETTCEEEEEESSS
T ss_pred cCcEEEEEEECCCCeEECCCCEEEEEEccc
Confidence 36999999999999 899999999998643
No 90
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=89.54 E-value=0.32 Score=37.68 Aligned_cols=28 Identities=25% Similarity=0.366 Sum_probs=25.5
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEec
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETD 36 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~ 36 (425)
..|+|.++++++|+.|..|++|++++..
T Consensus 54 ~~G~V~~i~v~~G~~V~~G~~l~~i~~~ 81 (93)
T 1k8m_A 54 YDGVIKKLYYNLDDIAYVGKPLVDIETE 81 (93)
T ss_dssp SCEEEEEECCCSSCEECTTSEEEEEECS
T ss_pred CCEEEEEEEcCCCCEeCCCCEEEEEecC
Confidence 4699999999999999999999999853
No 91
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=89.31 E-value=0.26 Score=36.67 Aligned_cols=27 Identities=30% Similarity=0.454 Sum_probs=24.8
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEec
Q 014404 10 EGNIARWLKKEGDKVSPGEVLCEVETD 36 (425)
Q Consensus 10 eg~i~~~~v~~Gd~V~~g~~l~~vet~ 36 (425)
.|+|.++++++|+.|..|++|+.++..
T Consensus 49 ~G~v~~~~v~~G~~V~~g~~l~~i~~~ 75 (79)
T 1iyu_A 49 AGVVKSVSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp SSEEEEESCCTTCEEETTSEEEEEECC
T ss_pred CEEEEEEEeCCCCEECCCCEEEEEecC
Confidence 689999999999999999999998753
No 92
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=88.16 E-value=0.33 Score=47.41 Aligned_cols=54 Identities=13% Similarity=0.121 Sum_probs=39.0
Q ss_pred cCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 18 KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 18 v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
++.|+.-..-..-+.|+... ...|.++.+|+|.++++++| +.|+.||+|+.+..
T Consensus 23 v~~~~~~~~~~~~G~v~~~~-~~~v~a~v~G~V~~v~v~~G-d~V~kGq~L~~ld~ 76 (369)
T 1vf7_A 23 LEAQTVTLNTELPGRTNAFR-IAEVRPQVNGIILKRLFKEG-SDVKAGQQLYQIDP 76 (369)
T ss_dssp ------CCEEEEEEECEESC-EEEECCSSCEEEEECCSCSS-EEECTTSEEEEECC
T ss_pred EEeeccceEEEEEEEEEeee-EEEEEeeCceEEEEEEcCCC-CEEcCCCEEEEECc
Confidence 44454444444556777654 67899999999999999999 89999999999843
No 93
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=87.64 E-value=0.52 Score=41.73 Aligned_cols=42 Identities=24% Similarity=0.307 Sum_probs=35.2
Q ss_pred EEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCC
Q 014404 15 RWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDG 58 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g 58 (425)
.++|+.|+.|++||.||+. |..+..|-|..+|+|.=-..-+|
T Consensus 63 ~L~V~dG~~V~~G~~laew--Dp~t~pIisE~~G~V~f~dii~G 104 (190)
T 2auk_A 63 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRFTDMIDG 104 (190)
T ss_dssp EESSCTTCEECTTCEEEEC--CSSEEEEECSSCEEEEEESCCBT
T ss_pred EEEecCCCEEcCCCEEEEE--cCcCCcEEeccccEEEEEeccCC
Confidence 6789999999999999976 89999999999999964333333
No 94
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=87.53 E-value=0.48 Score=47.08 Aligned_cols=44 Identities=11% Similarity=0.197 Sum_probs=36.6
Q ss_pred CeEEEEEec-ceeeEEecCCCeEEEEEEe-cCCCeeeeCCCEEEEEe
Q 014404 28 EVLCEVETD-KATVEMECMEEGYLAKIVK-GDGSKEIKVGEVIAITV 72 (425)
Q Consensus 28 ~~l~~vet~-K~~~~i~a~~~G~v~~~~~-~~g~~~v~~g~~l~~~~ 72 (425)
...+.|+.+ .-...|.++.+|+|.++++ ++| +.|+.||+|+.+.
T Consensus 109 ~~~G~V~~~~~~~~~v~a~~~G~V~~v~V~~~G-d~VkkGq~L~~ld 154 (413)
T 3ne5_B 109 SFPANVSYNEYQYAIVQARAAGFIDKVYPLTVG-DKVQKGTPLLDLT 154 (413)
T ss_dssp EEEEEEEEEEEEEEEECCSSCEEEEEECSCCTT-CEECTTCEEEEEE
T ss_pred EEEEEEEECCCceEEEecccCEEEEEEEeCCCC-CEEcCCCEEEEEc
Confidence 345566643 4568899999999999998 999 7999999999985
No 95
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=87.18 E-value=0.33 Score=36.26 Aligned_cols=30 Identities=13% Similarity=0.089 Sum_probs=26.6
Q ss_pred ecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 43 ECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 43 ~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
-++.+|.|.++++++| +.|+.||+|+.+..
T Consensus 11 g~~~~G~i~~~~v~~G-d~V~~G~~l~~ie~ 40 (81)
T 1gjx_A 11 GGHENVDIIAVEVNVG-DTIAVDDTLITLET 40 (81)
T ss_dssp SSCSSEEEEEECCCSS-CBCCSSCCCEEEEC
T ss_pred CCCCcEEEEEEEcCCC-CEECCCCEEEEEEe
Confidence 3578999999999999 79999999998854
No 96
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=86.35 E-value=0.55 Score=38.80 Aligned_cols=28 Identities=36% Similarity=0.591 Sum_probs=25.3
Q ss_pred ceEEEEEEEcCCCC-eecCCCeEEEEEec
Q 014404 9 QEGNIARWLKKEGD-KVSPGEVLCEVETD 36 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd-~V~~g~~l~~vet~ 36 (425)
..|+|.++++++|| .|..||+|++|+..
T Consensus 77 ~~G~V~~i~v~~Gd~~V~~G~~L~~i~~~ 105 (128)
T 1y8o_B 77 EEGYLAKILVPEGTRDVPLGTPLCIIVEK 105 (128)
T ss_dssp SCEEEEEESSCTTCCSEETTCEEEEEESS
T ss_pred CCeEEEEEEeCCCCeeecCCCEEEEEecC
Confidence 37999999999998 89999999999853
No 97
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=86.23 E-value=0.28 Score=37.17 Aligned_cols=28 Identities=25% Similarity=0.378 Sum_probs=25.2
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEec
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETD 36 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~ 36 (425)
..|+|.++++++|+.|..|++|+.|+.+
T Consensus 46 ~~G~V~~~~v~~G~~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 46 FAGVVKELKVNVGDKVKTGSLIMIFEVE 73 (85)
T ss_dssp SCBCCCEECSCTTCCBCTTSEEEEEECC
T ss_pred CCEEEEEEEeCCCCEECCCCEEEEEEcC
Confidence 3589999999999999999999999864
No 98
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.76 E-value=0.48 Score=37.11 Aligned_cols=29 Identities=21% Similarity=0.384 Sum_probs=26.1
Q ss_pred ceEEEEEEEcCCCCee-cCCCeEEEEEecc
Q 014404 9 QEGNIARWLKKEGDKV-SPGEVLCEVETDK 37 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V-~~g~~l~~vet~K 37 (425)
..|+|.++++++||.| ..|++|+.|+...
T Consensus 57 ~~G~v~~i~v~~G~~Vv~~G~~l~~i~~~~ 86 (98)
T 2dnc_A 57 DDGILAKIVVEEGSKNIRLGSLIGLIVEEG 86 (98)
T ss_dssp SCEEEEECSSCTTCCCEESSCEEEEEECTT
T ss_pred CCEEEEEEEeCCCCEEcCCCCEEEEEecCC
Confidence 3699999999999999 9999999998754
No 99
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=84.74 E-value=0.59 Score=37.32 Aligned_cols=27 Identities=30% Similarity=0.492 Sum_probs=24.8
Q ss_pred ceEEEEEEEcCCCC-eecCCCeEEEEEe
Q 014404 9 QEGNIARWLKKEGD-KVSPGEVLCEVET 35 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd-~V~~g~~l~~vet 35 (425)
..|+|.++++++|+ .|..|++|++|+.
T Consensus 57 ~~G~V~~i~v~~G~~~V~~G~~l~~i~~ 84 (108)
T 2dne_A 57 EECYMAKILVAEGTRDVPIGAIICITVG 84 (108)
T ss_dssp SSEEEEECSSCTTCCSEETTCEEEEEES
T ss_pred CCEEEEEEEeCCCCeeecCCCEEEEEec
Confidence 36999999999999 8999999999985
No 100
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=84.18 E-value=0.25 Score=43.68 Aligned_cols=45 Identities=36% Similarity=0.483 Sum_probs=35.5
Q ss_pred cCCCCeecCCCeEEEEEecceeeEEecCCCeEEEE--------------------------E--EecCCCeeeeCCCEEE
Q 014404 18 KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAK--------------------------I--VKGDGSKEIKVGEVIA 69 (425)
Q Consensus 18 v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~--------------------------~--~~~~g~~~v~~g~~l~ 69 (425)
|+.|+.|+.||+|+ | ...|-|..+|+|.= + .+++| |.|..|++|.
T Consensus 85 V~dG~~V~~GdvLA-----K-d~AIiaEIdG~V~fgkgkrrivI~~~~Ge~~eylIPk~k~i~~~V~eG-d~V~~Ge~L~ 157 (193)
T 2xha_A 85 LRVGTKVKQGLPLS-----K-NEEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKG-KEVKQGEMLA 157 (193)
T ss_dssp CCTTCEECTTSBSS-----T-TSCSBCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTT-CEECTTCEEE
T ss_pred cCCCCEEcCCCEEe-----c-CCeEEEccceEEEECCCeEEEEEECCCCCEEEEEeCCCCccccccCCC-CEECCCCCcc
Confidence 78999999999999 2 45567888888751 2 67888 6888888876
No 101
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=82.86 E-value=0.29 Score=47.59 Aligned_cols=54 Identities=20% Similarity=0.254 Sum_probs=42.8
Q ss_pred cCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 18 KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 18 v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
|+.|+.-..=..-+.|+..+ ...|.++.+|+|.++++++| +.|+.||+|+.+..
T Consensus 12 v~~~~~~~~v~~~G~v~~~~-~~~v~~~~~G~V~~v~v~~G-~~V~~Gq~L~~ld~ 65 (369)
T 4dk0_A 12 VKRGNIEKNVVATGSIESIN-TVDVGAQVSGKITKLYVKLG-QQVKKGDLLAEIDS 65 (369)
T ss_dssp CCEECCCCCCEEEEEEECSS-CCCBCCCSCSBCCEECCCTT-SCCCSSCCCEECCC
T ss_pred EEecceeEEEEEeEEEEeee-eEEEecCCCcEEEEEEECCC-CEECCCCEEEEEcC
Confidence 44455555555667788654 67899999999999999999 79999999998844
No 102
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=80.77 E-value=2.5 Score=36.91 Aligned_cols=41 Identities=22% Similarity=0.403 Sum_probs=32.8
Q ss_pred CCeEEEEEecceeeEEecCCCeEEEEE-----------------------------------EecCCCeeeeCCCEEEEE
Q 014404 27 GEVLCEVETDKATVEMECMEEGYLAKI-----------------------------------VKGDGSKEIKVGEVIAIT 71 (425)
Q Consensus 27 g~~l~~vet~K~~~~i~a~~~G~v~~~-----------------------------------~~~~g~~~v~~g~~l~~~ 71 (425)
|+-++..=++- .|.||++|+|..+ ++++| |.|+.||+|+.+
T Consensus 62 GdG~AI~P~~g---~v~AP~dG~V~~vfpT~HAigi~s~~G~EvLIHIGiDTV~L~G~gF~~~V~~G-d~Vk~Gd~L~~f 137 (183)
T 3our_B 62 GDGIAIKPTGN---KMVAPVNGTIGKIFETNHAFSIESDDGVELFVHFGIDTVELKGEGFTRIAEEG-QTVKAGDTVIEF 137 (183)
T ss_dssp CEEEEEEECSS---EEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTTTEEECSCTT-CEECTTCEEEEE
T ss_pred cCeEEEEcCCC---EEEeCCCeEEEEECCCCCEEEEEeCCCCEEEEEecccccccCCccceEEEeCc-CEEcCCCEEEEE
Confidence 66666554433 6889999999887 88999 799999999876
No 103
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=80.65 E-value=1.3 Score=47.15 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=30.6
Q ss_pred eeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 39 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
...|.||..|+|.++++++| |.|+.||+|+.+..
T Consensus 612 ~~~v~ap~~G~v~~~~v~~G-d~V~~g~~l~~iEa 645 (681)
T 3n6r_A 612 SKMLLCPMPGLIVKVDVEVG-QEVQEGQALCTIEA 645 (681)
T ss_dssp CSEEECCSCEEEEEECCCTT-CEECTTCEEEEEEC
T ss_pred CCeEECCCcEEEEEEEeCCC-CEEcCCCEEEEEEe
Confidence 45699999999999999999 79999999998853
No 104
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=79.11 E-value=0.26 Score=36.92 Aligned_cols=27 Identities=22% Similarity=0.436 Sum_probs=24.3
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEe
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet 35 (425)
..|+|.++++++||.|..|++|+.++.
T Consensus 52 ~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 52 ADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp SBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 368999999999999999999998864
No 105
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=78.28 E-value=1.3 Score=37.73 Aligned_cols=22 Identities=18% Similarity=0.347 Sum_probs=19.4
Q ss_pred EEEcCCCCeecCCCeEEEEEec
Q 014404 15 RWLKKEGDKVSPGEVLCEVETD 36 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~vet~ 36 (425)
+.+|++||.|++||+|+++.-+
T Consensus 92 ~~~V~~Gd~V~~G~~L~~~d~~ 113 (154)
T 2gpr_A 92 ESFVTQDQEVNAGDKLVTVDLK 113 (154)
T ss_dssp EECCCTTCEECTTCEEEEECHH
T ss_pred EEEEcCCCEEcCCCEEEEECHH
Confidence 4789999999999999999753
No 106
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=76.33 E-value=18 Score=36.94 Aligned_cols=31 Identities=6% Similarity=0.110 Sum_probs=28.8
Q ss_pred EEEEEEEecccccchHHHHHHHHHHHHHhcC
Q 014404 389 FMSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 419 (425)
Q Consensus 389 ~m~lslt~DHRviDG~~aa~Fl~~l~~~le~ 419 (425)
-|.|++.||-.+.|...+..||+.+++.|-.
T Consensus 486 ~L~l~~~yn~a~~~~e~v~~~l~~v~~~L~~ 516 (519)
T 3fot_A 486 ASTLNIIYNDANYTEAEVQKYLQSIVEFMLA 516 (519)
T ss_dssp EEEEEEEEETTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccccCCHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999998853
No 107
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=73.57 E-value=2.5 Score=47.58 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=30.3
Q ss_pred eEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 40 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
..|.||..|+|.++++++| |.|+.||+|+.+..
T Consensus 1078 ~~v~ap~~G~v~~~~v~~G-d~V~~G~~l~~iea 1110 (1150)
T 3hbl_A 1078 SHIGAQMPGSVTEVKVSVG-ETVKANQPLLITEA 1110 (1150)
T ss_dssp SEEECSSSEEEEEECCCTT-CEECTTCEEEEEES
T ss_pred ceeecCceEEEEEEEeCCC-CEECCCCEEEEEEe
Confidence 4699999999999999999 79999999998854
No 108
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=72.81 E-value=2.6 Score=47.80 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=31.0
Q ss_pred eeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 39 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
...|.||..|+|.++++++| |.|+.||+|+++..
T Consensus 1167 ~~~v~ap~~G~v~~~~v~~G-d~V~~g~~l~~iEa 1200 (1236)
T 3va7_A 1167 AELLYSEYTGRFWKPVAAVG-DHVEAGDGVIIIEA 1200 (1236)
T ss_dssp CEEEECSSCEEEEEESSCTT-CEECSSCEEEEEEE
T ss_pred CcEEeCCCcEEEEEEEcCCC-CEECCCCEEEEEEe
Confidence 45799999999999999999 79999999998854
No 109
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=72.35 E-value=2.7 Score=40.66 Aligned_cols=49 Identities=14% Similarity=0.108 Sum_probs=38.7
Q ss_pred EcCCCCeecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 17 LKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
.++.|+.|++||+|+++- | -+|.+|++|.+.- .. . -.|..|+.++.+..
T Consensus 280 ~~~~g~~V~~G~~La~i~-d---~~v~a~~dG~~i~--~p-~-p~V~~G~~~~~i~~ 328 (350)
T 2bco_A 280 NVENFTSFVHGEVFGHDG-D---KPLMAKNDNEAIV--FP-N-RHVAIGQRAALMVC 328 (350)
T ss_dssp TCCBTEECCTTCEEEEET-T---EEEECSSSSCEEE--SC-C-TTCCTTSEEEEEEE
T ss_pred cccCCCEeCCCCEEEEEC-C---EEEEeCCCCEEEE--ec-C-CCCCCCcEEEEEEE
Confidence 367899999999999984 4 6889999999753 33 4 47999998887654
No 110
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=71.29 E-value=2.9 Score=47.12 Aligned_cols=35 Identities=23% Similarity=0.381 Sum_probs=30.0
Q ss_pred EEEcCCCCeecCCCeEEEEEecceeeEEecCCCeEEE
Q 014404 15 RWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 51 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~ 51 (425)
.++|+.|+.|++||.||+. |--+..|-|..+|+|.
T Consensus 1002 ~l~v~~g~~V~~g~~ia~w--Dp~~~piise~~G~v~ 1036 (1407)
T 3lu0_D 1002 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVR 1036 (1407)
T ss_dssp EESSCSSCEECTTCEEEEC--CSSCCCEECSSCEEEE
T ss_pred EEEEcCCCEecCCCEEEEE--ecCceeEEeccceEEE
Confidence 5789999999999999987 6677888888888775
No 111
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=70.84 E-value=2.1 Score=45.59 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=30.2
Q ss_pred eEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 40 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
..|.||.+|+|.++.+++| +.|+.||+|+.+..
T Consensus 650 ~~v~ap~~G~V~~v~V~~G-d~V~~Gq~L~~iEa 682 (718)
T 3bg3_A 650 GQIGAPMPGKVIDIKVVAG-AKVAKGQPLCVLSA 682 (718)
T ss_dssp SCEECSSCEEEEEECSCTT-CCBCTTCCCEEEES
T ss_pred ceEeCCCCeEEEEEEeCCC-CeeCCCCEEEEEec
Confidence 4699999999999999999 79999999998853
No 112
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=69.65 E-value=2.6 Score=36.77 Aligned_cols=26 Identities=19% Similarity=0.304 Sum_probs=21.7
Q ss_pred EEEEEEcCCCCeecCCCeEEEEEecc
Q 014404 12 NIARWLKKEGDKVSPGEVLCEVETDK 37 (425)
Q Consensus 12 ~i~~~~v~~Gd~V~~g~~l~~vet~K 37 (425)
+-=+++|++||.|++||+|+++.-++
T Consensus 116 ~gF~~~V~~Gd~Vk~Gd~L~~fD~~~ 141 (183)
T 3our_B 116 EGFTRIAEEGQTVKAGDTVIEFDLAL 141 (183)
T ss_dssp TTEEECSCTTCEECTTCEEEEECHHH
T ss_pred ccceEEEeCcCEEcCCCEEEEECHHH
Confidence 33478999999999999999997543
No 113
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=65.97 E-value=1.2 Score=47.12 Aligned_cols=32 Identities=9% Similarity=0.311 Sum_probs=0.0
Q ss_pred eEEecCCCeEEEEEEecCCCeeeeCCCEEEEEe
Q 014404 40 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 72 (425)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~ 72 (425)
..|.||..|+|.++++++| |.|+.||+|+.+.
T Consensus 603 ~~v~ap~~G~v~~~~v~~G-d~V~~g~~l~~iE 634 (675)
T 3u9t_A 603 GGLSAPMNGSIVRVLVEPG-QTVEAGATLVVLE 634 (675)
T ss_dssp ---------------------------------
T ss_pred CeEECCCCEEEEEEEeCCC-CEEcCCCEEEEEE
Confidence 4589999999999999999 7999999999874
No 114
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=65.18 E-value=4 Score=46.07 Aligned_cols=33 Identities=12% Similarity=0.353 Sum_probs=27.3
Q ss_pred eEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 40 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
..|.||..|+|.++.+++| +.|+.||+|+.+..
T Consensus 1096 ~~v~ap~~G~v~~~~v~~G-d~V~~G~~l~~iEa 1128 (1165)
T 2qf7_A 1096 AHVGAPMPGVISRVFVSSG-QAVNAGDVLVSIEA 1128 (1165)
T ss_dssp TEEECSSCEEEEEECCSSC-CCC---CEEEEEEC
T ss_pred ceeeCCCCeEEEEEEcCCc-CEeCCCCEEEEEEc
Confidence 5699999999999999999 79999999998853
No 115
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=64.62 E-value=1.4 Score=44.10 Aligned_cols=29 Identities=21% Similarity=0.369 Sum_probs=0.0
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 014404 9 QEGNIARWLKKEGDKVSPGEVLCEVETDK 37 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~V~~g~~l~~vet~K 37 (425)
.+|+|.++++++||.|..||+|+.|+.+.
T Consensus 52 ~~G~v~~i~v~~G~~V~~G~~l~~i~~~~ 80 (428)
T 3dva_I 52 VKGKVLEILVPEGTVATVGQTLITLDAPG 80 (428)
T ss_dssp -----------------------------
T ss_pred CCeEEEEEEeCCCCEeCCCCEEEEEecCC
Confidence 57999999999999999999999998754
No 116
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=62.23 E-value=3.4 Score=40.07 Aligned_cols=28 Identities=32% Similarity=0.444 Sum_probs=20.3
Q ss_pred cCCCCeecCCCeEEEEEecceeeEEecCCCeEEE
Q 014404 18 KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 51 (425)
Q Consensus 18 v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~ 51 (425)
|+.|+.|+.||+|+ | ...|-|..+|+|.
T Consensus 125 v~~g~~v~~G~vla-----k-~~aiiaeidG~V~ 152 (352)
T 2xhc_A 125 LRVGTKVKQGLPLS-----K-NEEYICELDGKIV 152 (352)
T ss_dssp CCTTCEECTTCBSB-----S-SSSCBCCSCEEEE
T ss_pred cCCCCEEccCcEEe-----c-CceEEeccceEEE
Confidence 88999999999888 2 3445566666554
No 117
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=62.12 E-value=87 Score=30.75 Aligned_cols=28 Identities=11% Similarity=-0.047 Sum_probs=24.9
Q ss_pred EEEEEecccccchHHHHHHHHHHHHHhc
Q 014404 391 SVTLSCDHRVIDGAIGAEWLKAFKGYIE 418 (425)
Q Consensus 391 ~lslt~DHRviDG~~aa~Fl~~l~~~le 418 (425)
-|-|++||-++||.-...|++.|.+...
T Consensus 135 ~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~ 162 (493)
T 4hvm_A 135 VLGVVAHQMLLDARSRYMVLGAVWQAYY 162 (493)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEecchhhccHHHHHHHHHHHHHHhC
Confidence 4568999999999999999999998763
No 118
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=60.01 E-value=5.2 Score=34.23 Aligned_cols=22 Identities=23% Similarity=0.525 Sum_probs=19.0
Q ss_pred EEEcCCCCeecCCCeEEEEEec
Q 014404 15 RWLKKEGDKVSPGEVLCEVETD 36 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~vet~ 36 (425)
+.+|++||.|++||+|+++.-+
T Consensus 97 ~~~V~~Gd~V~~G~~L~~~d~~ 118 (161)
T 1f3z_A 97 KRIAEEGQRVKVGDTVIEFDLP 118 (161)
T ss_dssp EECSCTTCEECTTCEEEEECHH
T ss_pred EEEEeCcCEECCCCEEEEECHH
Confidence 4489999999999999999753
No 119
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=58.66 E-value=7.4 Score=38.33 Aligned_cols=29 Identities=17% Similarity=0.276 Sum_probs=27.1
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhc
Q 014404 390 MSVTLSCDHRVIDGAIGAEWLKAFKGYIE 418 (425)
Q Consensus 390 m~lslt~DHRviDG~~aa~Fl~~l~~~le 418 (425)
+-|+++++|.++||.-+..|++.|.++..
T Consensus 152 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r 180 (421)
T 2bgh_A 152 TAIGVNLSHKIADVLSLATFLNAWTATCR 180 (421)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeeEEechHHHHHHHHHHHHHHhc
Confidence 77899999999999999999999998875
No 120
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=58.19 E-value=7.3 Score=38.72 Aligned_cols=29 Identities=21% Similarity=0.300 Sum_probs=27.3
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhc
Q 014404 390 MSVTLSCDHRVIDGAIGAEWLKAFKGYIE 418 (425)
Q Consensus 390 m~lslt~DHRviDG~~aa~Fl~~l~~~le 418 (425)
+-|+++++|.++||.-+..|++.|.++..
T Consensus 157 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r 185 (453)
T 2xr7_A 157 ISIGFTNHHVAGDGATIVKFVRAWALLNK 185 (453)
T ss_dssp EEEEEEECTTTCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEeeeeeeechhHHHHHHHHHHHHhh
Confidence 77899999999999999999999999876
No 121
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=58.03 E-value=8.2 Score=38.37 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=27.3
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhc
Q 014404 390 MSVTLSCDHRVIDGAIGAEWLKAFKGYIE 418 (425)
Q Consensus 390 m~lslt~DHRviDG~~aa~Fl~~l~~~le 418 (425)
+-|+++++|.++||.-+..|++.|.++..
T Consensus 162 ~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r 190 (454)
T 2e1v_A 162 IAIGITNHHCLGDASTRFCFLKAWTSIAR 190 (454)
T ss_dssp EEEEEEECGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeeeeecchhHHHHHHHHHHHHhc
Confidence 77899999999999999999999999876
No 122
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=57.37 E-value=8 Score=38.34 Aligned_cols=30 Identities=13% Similarity=0.153 Sum_probs=27.4
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhcC
Q 014404 390 MSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 419 (425)
Q Consensus 390 m~lslt~DHRviDG~~aa~Fl~~l~~~le~ 419 (425)
+-|+++++|.++||.-+..|++.+.+....
T Consensus 148 ~~lg~~~~H~v~Dg~g~~~Fl~awa~~~rg 177 (451)
T 2rkv_A 148 LILTVNGQHGAMDMVGQDAVIRLLSKACRN 177 (451)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeehhccccHHHHHHHHHHHHHHhcC
Confidence 778899999999999999999999988754
No 123
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=57.32 E-value=12 Score=37.24 Aligned_cols=43 Identities=21% Similarity=0.360 Sum_probs=36.2
Q ss_pred EEecceeeEEecCCCeEEEEE-------------------------------EecCCCeeeeCCCEEEEEecccc
Q 014404 33 VETDKATVEMECMEEGYLAKI-------------------------------VKGDGSKEIKVGEVIAITVEEEE 76 (425)
Q Consensus 33 vet~K~~~~i~a~~~G~v~~~-------------------------------~~~~g~~~v~~g~~l~~~~~~~~ 76 (425)
+-..|...+|.|+.+|+|..| +.+.| +.|..|++|+++....+
T Consensus 329 ~~~~~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~~d~~~Gi~~~~k~g-~~v~~g~~l~~i~~~~~ 402 (433)
T 1brw_A 329 LPKAAYTSTVTAAADGYVAEMAADDIGTAAMWLGAGRAKKEDVIDLAVGIVLHKKIG-DRVQKGEALATIHSNRP 402 (433)
T ss_dssp SCCCSEEEEEECSSSEEEEEECHHHHHHHHHHHTTSCSSTTCCCCTTCEEEESCCTT-CEECTTCEEEEEEESSS
T ss_pred CCCCCeEEEEecCCCeEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCC-CEECCCCeEEEEEcCCc
Confidence 345788899999999999887 77889 79999999999876543
No 124
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=56.74 E-value=7.8 Score=36.34 Aligned_cols=23 Identities=30% Similarity=0.436 Sum_probs=17.6
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe
Q 014404 13 IARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 13 i~~~~v~~Gd~V~~g~~l~~vet 35 (425)
-++|++++|+.|++||+|++++.
T Consensus 72 ~v~~~~~dG~~v~~g~~v~~i~G 94 (284)
T 1qpo_A 72 RVLDRVEDGARVPPGEALMTLEA 94 (284)
T ss_dssp EEEEECCTTCEECTTCEEEEEEE
T ss_pred EEEEEcCCCCEecCCcEEEEEEE
Confidence 45778888888888888887764
No 125
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=56.24 E-value=11 Score=37.28 Aligned_cols=42 Identities=17% Similarity=0.373 Sum_probs=35.0
Q ss_pred EEecceeeEEecCCCeEEEEE-------------------------------EecCCCeeeeCCCEEEEEecccc
Q 014404 33 VETDKATVEMECMEEGYLAKI-------------------------------VKGDGSKEIKVGEVIAITVEEEE 76 (425)
Q Consensus 33 vet~K~~~~i~a~~~G~v~~~-------------------------------~~~~g~~~v~~g~~l~~~~~~~~ 76 (425)
+-..+ ..+|.|+.+|+|..| +.+.| |.|..|++|+++....+
T Consensus 322 ~~~a~-~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g-~~v~~g~~l~~i~~~~~ 394 (423)
T 2dsj_A 322 LPLAE-EHPLRAEREGVVREVDAYKVGLAVLALGGGRKRKGEPIDHGVGVYLLKKPG-DRVERGEALALVYHRRR 394 (423)
T ss_dssp SCCCE-EEEEECSSCEEEEEECHHHHHHHHHHHTSSCSSTTCCCCTTCEEEESCCTT-CEECTTSEEEEEEECSS
T ss_pred CCCCC-eEEEecCCCeEEEEechHHHHHHHHHcCCCcCcCCCCCCcCcCeeeeccCC-CEeCCCCeEEEEEeCCc
Confidence 34567 889999999999887 77889 79999999999876543
No 126
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=56.13 E-value=13 Score=37.09 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=33.0
Q ss_pred ecceeeEEecCCCeEEEEE-------------------------------EecCCCeeeeCCCEEEEEe
Q 014404 35 TDKATVEMECMEEGYLAKI-------------------------------VKGDGSKEIKVGEVIAITV 72 (425)
Q Consensus 35 t~K~~~~i~a~~~G~v~~~-------------------------------~~~~g~~~v~~g~~l~~~~ 72 (425)
..+...+|.|+.+|+|..| +.+.| +.|..|++|+++.
T Consensus 334 ~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lGagr~~~~d~id~~~Gi~l~~~~G-~~V~~g~~l~~i~ 401 (436)
T 3h5q_A 334 QAQYQIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIG-DKVEEGESLLTIH 401 (436)
T ss_dssp CCSEEEEEECSSCEEEEEECHHHHHHHHHHTTTSCSSTTCCCCTTCEEEESCCTT-CEECTTSEEEEEE
T ss_pred CCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCCCCceEEecCCc-CEeCCCCeEEEEe
Confidence 4577889999999999988 67899 7999999999988
No 127
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=55.37 E-value=7.3 Score=36.58 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=15.9
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 014404 14 ARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 14 ~~~~v~~Gd~V~~g~~l~~vet 35 (425)
++|++++|+.|++||+|++++.
T Consensus 77 v~~~~~dG~~v~~g~~v~~i~G 98 (287)
T 3tqv_A 77 ITWLYSDAQKVPANARIFELKG 98 (287)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEEE
Confidence 4677777777777777777764
No 128
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=55.01 E-value=1.4e+02 Score=28.53 Aligned_cols=112 Identities=10% Similarity=0.001 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhCCCCCceecCCceeeeCccceEEEeecCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHhcCCCCCC
Q 014404 254 NDLVIKAAALALRKVPRCNSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQ 333 (425)
Q Consensus 254 ~~~likA~~~Al~~~P~ln~~~~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~l~~~a~~~~l~~~ 333 (425)
...+-+|+...+.+||.||.++..+.- .+......-+.++.-....+-.+ ++.+...+.....+...
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~~~----------~v~~~~~~~~~~~d~~~~~~~~~---~~~~~~~~~~~~~fdl~ 101 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQGE----------LYWHPFSPPIDYQDLSIHLEAEP---LAWRQIEQDLQRSSTLI 101 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTTCC----------EEECSSCCCCEEEECTTCTTHHH---HHHHHHHHHHTSCCCCB
T ss_pred HHHHHHHHHHHHHHhheeEEEEEecCC----------eECCCcCCCccEEeCCCCCCHHH---HHHHHHHHHhcCCCCcC
Q ss_pred CCCCCeEEEeeCCCCCCccceeeeeCCCCeeEEeeccceEEeeecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHH
Q 014404 334 DYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAF 413 (425)
Q Consensus 334 d~~~~t~tISnlg~~~g~~~~~pii~~p~~ail~vG~i~~~~v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l 413 (425)
.-.---+.+-.++. +. .-|-+++||-++||.-...|++.|
T Consensus 102 ~~pl~r~~l~~~~~---------------------------------~~-------~~l~~~~HH~i~Dg~S~~~l~~~l 141 (436)
T 1l5a_A 102 DAPITSHQVYRLSH---------------------------------SE-------HLIYTRAHHIVLDGYGMMLFEQRL 141 (436)
T ss_dssp TSCSCEEEEEEEET---------------------------------TE-------EEEEEEEETTTCCHHHHHHHHHHH
T ss_pred CCCCeEEEEEEEcC---------------------------------CE-------EEEEEeehhheecHhHHHHHHHHH
Q ss_pred HHHhc
Q 014404 414 KGYIE 418 (425)
Q Consensus 414 ~~~le 418 (425)
.++..
T Consensus 142 ~~~Y~ 146 (436)
T 1l5a_A 142 SQHYQ 146 (436)
T ss_dssp HHHHH
T ss_pred HHHHH
No 129
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=55.01 E-value=2.5 Score=38.39 Aligned_cols=27 Identities=22% Similarity=0.458 Sum_probs=0.0
Q ss_pred ceEEEEEEEcCCCCe-ecCCCeEEEEEe
Q 014404 9 QEGNIARWLKKEGDK-VSPGEVLCEVET 35 (425)
Q Consensus 9 ~eg~i~~~~v~~Gd~-V~~g~~l~~vet 35 (425)
.+|+|.++++++||. |..|++|+.|+.
T Consensus 53 ~~G~v~~i~v~~G~~~V~~G~~l~~i~~ 80 (229)
T 1zy8_K 53 DDGILAKIVVEEGSKNIRLGSLIGLIVE 80 (229)
T ss_dssp ----------------------------
T ss_pred CCeEEEEEEecCCCeeecCCCEEEEEec
Confidence 469999999999997 999999999975
No 130
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=54.77 E-value=9.9 Score=37.64 Aligned_cols=30 Identities=17% Similarity=0.405 Sum_probs=27.4
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhcC
Q 014404 390 MSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 419 (425)
Q Consensus 390 m~lslt~DHRviDG~~aa~Fl~~l~~~le~ 419 (425)
+-|+++++|.++||.-+..|++.|.+....
T Consensus 150 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg 179 (439)
T 4g22_A 150 VSLGVGMRHHAADGFSGLHFINSWSDMARG 179 (439)
T ss_dssp EEEEEEECTTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeeeccCcHHHHHHHHHHHHHHhCC
Confidence 778899999999999999999999988753
No 131
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=54.41 E-value=7.9 Score=36.52 Aligned_cols=22 Identities=27% Similarity=0.279 Sum_probs=16.1
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 014404 14 ARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 14 ~~~~v~~Gd~V~~g~~l~~vet 35 (425)
++|++++|+.|++||+|++++.
T Consensus 86 v~~~~~dG~~v~~g~~v~~i~G 107 (300)
T 3l0g_A 86 YEIHKKDGDITGKNSTLVSGEA 107 (300)
T ss_dssp EEECCCTTCEECSSCEEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEEE
Confidence 4677777777777777777764
No 132
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=54.21 E-value=7.7 Score=36.41 Aligned_cols=22 Identities=27% Similarity=0.320 Sum_probs=16.8
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 014404 14 ARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 14 ~~~~v~~Gd~V~~g~~l~~vet 35 (425)
++|++++|+.|++||+|++++.
T Consensus 74 v~~~~~dG~~v~~g~~v~~i~G 95 (286)
T 1x1o_A 74 FTPLVAEGARVAEGTEVARVRG 95 (286)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCCccCCCEEEEEEE
Confidence 5677888888888888777764
No 133
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=53.87 E-value=5 Score=34.39 Aligned_cols=24 Identities=42% Similarity=0.628 Sum_probs=20.0
Q ss_pred EEEEcCCCCeecCCCeEEEEEecc
Q 014404 14 ARWLKKEGDKVSPGEVLCEVETDK 37 (425)
Q Consensus 14 ~~~~v~~Gd~V~~g~~l~~vet~K 37 (425)
-+.+|++||.|++||+|+++.-++
T Consensus 96 F~~~V~~Gd~V~~G~~L~~~d~~~ 119 (162)
T 1ax3_A 96 FTSFVSEGDRVEPGQKLLEVDLDA 119 (162)
T ss_dssp EEESCCCCSEECSEEEEEEECHHH
T ss_pred cEEEEeCCCEEcCCCEEEEECHHH
Confidence 355899999999999999997543
No 134
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=52.81 E-value=10 Score=35.24 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=10.9
Q ss_pred EEEcCCCCeecCCCeEEEEE
Q 014404 15 RWLKKEGDKVSPGEVLCEVE 34 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~ve 34 (425)
+|.+++|+.|.+|++|++|+
T Consensus 61 ~~~~~eG~~v~~g~~~~~v~ 80 (273)
T 2b7n_A 61 VQTIKDKERFKPKDALMEIR 80 (273)
T ss_dssp EEECCTTCEECTTCEEEEEE
T ss_pred EEEcCCCCCcCCCCEEEEEE
Confidence 45555555555555555554
No 135
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=52.74 E-value=8.4 Score=36.33 Aligned_cols=22 Identities=32% Similarity=0.835 Sum_probs=15.3
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 014404 14 ARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 14 ~~~~v~~Gd~V~~g~~l~~vet 35 (425)
++|++++|+.|++||+|++|+.
T Consensus 88 v~~~~~dG~~v~~g~~l~~v~G 109 (298)
T 3gnn_A 88 VDWRHREGDRMSADSTVCELRG 109 (298)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCEecCCCEEEEEEe
Confidence 4677777777777777777664
No 136
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=52.64 E-value=9.5 Score=37.12 Aligned_cols=33 Identities=9% Similarity=0.141 Sum_probs=29.3
Q ss_pred eeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 39 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
.--|.||.+|.+. ..++.| +.|+.||+|+.|.+
T Consensus 290 ~~~v~A~~~Gl~~-~~v~lG-d~V~kG~~la~I~d 322 (368)
T 3fmc_A 290 YRKFHAPKAGMVE-YLGKVG-VPMKATDPLVNLLR 322 (368)
T ss_dssp EEEEECSSCEEEE-ECSCTT-CCBCTTCEEEEEEC
T ss_pred cEEEecCCCEEEE-EeCCCC-CEeCCCCEEEEEEc
Confidence 4458999999997 778999 79999999999976
No 137
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=52.51 E-value=7.1 Score=36.64 Aligned_cols=22 Identities=18% Similarity=0.391 Sum_probs=13.1
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 014404 14 ARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 14 ~~~~v~~Gd~V~~g~~l~~vet 35 (425)
++|++++|+.|++||+|++++.
T Consensus 73 v~~~~~dG~~v~~g~~v~~i~G 94 (285)
T 1o4u_A 73 SKFNVEDGEYLEGTGVIGEIEG 94 (285)
T ss_dssp EEESCCTTCEEESCEEEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEEE
Confidence 4566666666666666666553
No 138
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=51.27 E-value=9.1 Score=36.47 Aligned_cols=22 Identities=27% Similarity=0.830 Sum_probs=15.6
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 014404 14 ARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 14 ~~~~v~~Gd~V~~g~~l~~vet 35 (425)
++|.+++|+.|++||+|++|+.
T Consensus 110 v~~~~~dG~~v~~g~~l~~v~G 131 (320)
T 3paj_A 110 IEWHVQDGDTLTPNQTLCTLTG 131 (320)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEeCCCCEecCCCEEEEEEe
Confidence 4677777777777777777764
No 139
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=50.04 E-value=5.9 Score=34.55 Aligned_cols=19 Identities=21% Similarity=0.144 Sum_probs=9.3
Q ss_pred EEcCCCCeecCCCeEEEEE
Q 014404 16 WLKKEGDKVSPGEVLCEVE 34 (425)
Q Consensus 16 ~~v~~Gd~V~~g~~l~~ve 34 (425)
+.|++||.|++||+|+.+-
T Consensus 85 i~V~~G~~V~~Gq~IG~vG 103 (182)
T 3it5_A 85 IQVSNGQQVSADTKLGVYA 103 (182)
T ss_dssp CCCCTTCEECTTCEEEEEC
T ss_pred cccCCCCEEcCCCEEEeec
Confidence 3445555555555555443
No 140
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=49.56 E-value=10 Score=35.66 Aligned_cols=22 Identities=18% Similarity=0.540 Sum_probs=16.5
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 014404 14 ARWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 14 ~~~~v~~Gd~V~~g~~l~~vet 35 (425)
++|.+++|+.|.+|++|++|+.
T Consensus 87 v~~~~~dG~~v~~g~~~~~v~G 108 (296)
T 1qap_A 87 LTWHVDDGDAIHANQTVFELQG 108 (296)
T ss_dssp EEESCCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCEecCCCEEEEEEE
Confidence 5677777777777777777764
No 141
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=48.54 E-value=12 Score=37.29 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=35.2
Q ss_pred EecceeeEEecCCCeEEEEE-------------------------------EecCCCeeeeCCCEEEEEeccc
Q 014404 34 ETDKATVEMECMEEGYLAKI-------------------------------VKGDGSKEIKVGEVIAITVEEE 75 (425)
Q Consensus 34 et~K~~~~i~a~~~G~v~~~-------------------------------~~~~g~~~v~~g~~l~~~~~~~ 75 (425)
-..|...+|.|+.+|+|..| +.+.| +.|..|++|+++....
T Consensus 335 ~~a~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g-~~v~~g~~l~~i~~~~ 406 (440)
T 2tpt_A 335 PTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLG-DQVDGQRPLAVIHAKD 406 (440)
T ss_dssp CCCSEEEEECCSSCEEEEEECHHHHHHHHHHHTTSCSSTTCCCCSSCEEESCCCTT-CEEBTTBCSEEEEESS
T ss_pred CCCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCC-CEECCCCeEEEEecCC
Confidence 45678889999999999888 78889 7999999999987543
No 142
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=46.55 E-value=14 Score=35.25 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=29.1
Q ss_pred eeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEecc
Q 014404 38 ATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 74 (425)
Q Consensus 38 ~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~~ 74 (425)
...-|.||.+|.+. ..++.| +.|+.||+|++|.+.
T Consensus 256 ~~~~v~A~~~Gl~~-~~v~~G-d~V~~G~~la~I~dp 290 (331)
T 3na6_A 256 GDCYLFSEHDGLFE-IMIDLG-EPVQEGDLVARVWSP 290 (331)
T ss_dssp SCCCEECSSCEEEE-ESSCTT-CEECTTCEEEEEECS
T ss_pred CcEEEeCCCCeEEE-EcCCCC-CEEcCCCEEEEEEcC
Confidence 34558999999886 468999 799999999998763
No 143
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=44.36 E-value=14 Score=36.55 Aligned_cols=31 Identities=35% Similarity=0.461 Sum_probs=25.5
Q ss_pred CCceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 014404 7 TMQEGNIARWLKKEGDKVSPGEVLCEVETDK 37 (425)
Q Consensus 7 ~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K 37 (425)
.+.-+.=+.++++.||.|++||+|++|=+++
T Consensus 363 ~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 393 (423)
T 2dsj_A 363 PIDHGVGVYLLKKPGDRVERGEALALVYHRR 393 (423)
T ss_dssp CCCTTCEEEESCCTTCEECTTSEEEEEEECS
T ss_pred CCCcCcCeeeeccCCCEeCCCCeEEEEEeCC
Confidence 3445556789999999999999999997654
No 144
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=44.36 E-value=14 Score=36.66 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=25.5
Q ss_pred CCceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 014404 7 TMQEGNIARWLKKEGDKVSPGEVLCEVETDK 37 (425)
Q Consensus 7 ~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K 37 (425)
.+.-+.=+.++++.||.|++||+|++|=+++
T Consensus 371 ~~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 401 (433)
T 1brw_A 371 VIDLAVGIVLHKKIGDRVQKGEALATIHSNR 401 (433)
T ss_dssp CCCTTCEEEESCCTTCEECTTCEEEEEEESS
T ss_pred CCCcCcCeeEeccCCCEECCCCeEEEEEcCC
Confidence 3444556789999999999999999997764
No 145
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=43.95 E-value=12 Score=35.31 Aligned_cols=20 Identities=35% Similarity=0.667 Sum_probs=9.6
Q ss_pred EEEcCCCCeecCCCeEEEEE
Q 014404 15 RWLKKEGDKVSPGEVLCEVE 34 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~ve 34 (425)
+|.+++|+.|.+||+|++|+
T Consensus 74 ~~~~~dG~~v~~g~~l~~v~ 93 (299)
T 2jbm_A 74 SWFLPEGSKLVPVARVAEVR 93 (299)
T ss_dssp EESSCTTCEECSSEEEEEEE
T ss_pred EEEcCCCCCCCCCCEEEEEE
Confidence 34444444444444444444
No 146
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=43.85 E-value=12 Score=37.28 Aligned_cols=31 Identities=29% Similarity=0.332 Sum_probs=25.1
Q ss_pred CCceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 014404 7 TMQEGNIARWLKKEGDKVSPGEVLCEVETDK 37 (425)
Q Consensus 7 ~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K 37 (425)
-+.-+.=+.++++.||.|++||+|++|=.++
T Consensus 374 ~id~~~Gi~l~~~~G~~V~~g~~l~~i~~~~ 404 (436)
T 3h5q_A 374 DIDLAVGIVLNKKIGDKVEEGESLLTIHSNR 404 (436)
T ss_dssp CCCTTCEEEESCCTTCEECTTSEEEEEEESS
T ss_pred CCCCCCceEEecCCcCEeCCCCeEEEEeCCh
Confidence 4455667899999999999999999886333
No 147
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=43.29 E-value=11 Score=34.55 Aligned_cols=26 Identities=19% Similarity=0.341 Sum_probs=20.6
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEec
Q 014404 11 GNIARWLKKEGDKVSPGEVLCEVETD 36 (425)
Q Consensus 11 g~i~~~~v~~Gd~V~~g~~l~~vet~ 36 (425)
+-+.++.|++||.|++||+|+.+-..
T Consensus 130 ~HL~~i~Vk~Gd~V~~Gq~IG~vG~t 155 (245)
T 3tuf_B 130 QSLSEVSVEQGDKVKQNQVIGKSGKN 155 (245)
T ss_dssp EEESEESCCTTCEECTTCEEEECBCC
T ss_pred ecCCccccCCCCEECCCCEEEEeCCc
Confidence 44557889999999999999988653
No 148
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=42.53 E-value=12 Score=35.12 Aligned_cols=19 Identities=37% Similarity=0.410 Sum_probs=9.7
Q ss_pred EEEcCCCCeecCCCeEEEE
Q 014404 15 RWLKKEGDKVSPGEVLCEV 33 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~v 33 (425)
++.|++||.|++||+|+.+
T Consensus 231 ~i~V~~G~~V~~Gq~IG~v 249 (282)
T 2hsi_A 231 KIDVKLGQQVPRGGVLGKV 249 (282)
T ss_dssp EECSCTTCEECTTCEEEEC
T ss_pred ccccCCcCEECCCCEEEEE
Confidence 3445555555555555544
No 149
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=42.25 E-value=17 Score=36.61 Aligned_cols=28 Identities=25% Similarity=0.253 Sum_probs=20.5
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecc
Q 014404 10 EGNIARWLKKEGDKVSPGEVLCEVETDK 37 (425)
Q Consensus 10 eg~i~~~~v~~Gd~V~~g~~l~~vet~K 37 (425)
-+.-+.++++.||.|++||+|++|=+++
T Consensus 409 ~~~Gi~l~~k~G~~V~~g~~l~~i~~~~ 436 (474)
T 1uou_A 409 LGVGAELLVDVGQRLRRGTPWLRVHRDG 436 (474)
T ss_dssp SSCEEEECSCTTCEECTTCEEEEEEESS
T ss_pred CCCceEEEccCCCEECCCCeEEEEEcCC
Confidence 3445678888888888888888876543
No 150
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=41.86 E-value=12 Score=35.08 Aligned_cols=20 Identities=25% Similarity=0.464 Sum_probs=12.6
Q ss_pred EEecCCCeeeeCCCEEEEEec
Q 014404 53 IVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 53 ~~~~~g~~~v~~g~~l~~~~~ 73 (425)
+.|++| +.|+.||+|+.+..
T Consensus 239 i~Vk~G-q~V~~GqvIG~vG~ 258 (291)
T 1qwy_A 239 LTVSAG-DKVKAGDQIAYSGS 258 (291)
T ss_dssp ECCCTT-CEECTTCEEEECCC
T ss_pred cccCCc-CEECCCCEEEEECC
Confidence 346667 56777777766644
No 151
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=41.51 E-value=32 Score=34.54 Aligned_cols=42 Identities=10% Similarity=0.177 Sum_probs=34.4
Q ss_pred EEecceeeEEecCCCeEEEE-----------------------------EEecCCCeeeeCCCEEEEEeccc
Q 014404 33 VETDKATVEMECMEEGYLAK-----------------------------IVKGDGSKEIKVGEVIAITVEEE 75 (425)
Q Consensus 33 vet~K~~~~i~a~~~G~v~~-----------------------------~~~~~g~~~v~~g~~l~~~~~~~ 75 (425)
+-..+...+|.|+.+|+|.. ++.+.| +.|..|++|+++....
T Consensus 366 l~~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lG~gr~~~~id~~~Gi~l~~k~G-~~V~~g~~l~~i~~~~ 436 (474)
T 1uou_A 366 LPRAREQEELLAPADGTVELVRALPLALVLHELGAGRAGEPLRLGVGAELLVDVG-QRLRRGTPWLRVHRDG 436 (474)
T ss_dssp SCCCSEEEEEECSSCEEEEEECHHHHHHHHHHHHC------CCSSCEEEECSCTT-CEECTTCEEEEEEESS
T ss_pred CCCCCeeEEEECCCCeEEEEecHHHHHHHHHHhCCCCcCCccCCCCceEEEccCC-CEECCCCeEEEEEcCC
Confidence 34567888999999999954 477889 7999999999987543
No 152
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=36.57 E-value=16 Score=33.56 Aligned_cols=17 Identities=18% Similarity=0.401 Sum_probs=8.9
Q ss_pred ecCCCeeeeCCCEEEEEe
Q 014404 55 KGDGSKEIKVGEVIAITV 72 (425)
Q Consensus 55 ~~~g~~~v~~g~~l~~~~ 72 (425)
++.| +.|+.||+|+.+.
T Consensus 184 V~~G-~~V~~Gq~IG~vG 200 (252)
T 3nyy_A 184 LEKG-DPVKAGDLLGYMG 200 (252)
T ss_dssp CCTT-CEECTTCEEEECB
T ss_pred CCCC-CEECCCCEEEEEC
Confidence 4555 4555555555544
No 153
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=36.00 E-value=2.8e+02 Score=26.01 Aligned_cols=67 Identities=13% Similarity=0.133 Sum_probs=42.4
Q ss_pred CcccHHHHHHHHHHHHHhhCCCCCceecCCceeeeCccceEEEeec----------CC-----CeEEEEEecCCCCCHHH
Q 014404 249 KRISVNDLVIKAAALALRKVPRCNSSWADEYIRQFKNVNINVAVQT----------EN-----GLYVPVIRDADKKGLST 313 (425)
Q Consensus 249 ~klt~~~~likA~~~Al~~~P~ln~~~~~~~i~~~~~i~i~~av~~----------~~-----gl~~pvi~~~~~~sl~e 313 (425)
.++|++.+++-|.+.+|.++ ...+. +.+-+|+.+.. ++ |.++-.+.-....++.+
T Consensus 233 ~~~t~~~~l~aa~~~~l~r~-----~~~~~-----~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~~~~~~~~ 302 (422)
T 1q9j_A 233 HRLSLNAVVAAAILLTEWQL-----RNTPH-----VPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVD 302 (422)
T ss_dssp TTCCHHHHHHHHHHHHHHHH-----HTCSS-----CCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCCSSCCHHH
T ss_pred hCCCHHHHHHHHHHHHHHhc-----ccCCC-----ceEEEeeeeecccccCCCCChhhhhhhheeeeeeeeccCCCCHHH
Confidence 35899999999999999975 11111 23445555542 11 34444444445668999
Q ss_pred HHHHHHHHHHHH
Q 014404 314 IAEEVRQLAQKA 325 (425)
Q Consensus 314 i~~~~~~l~~~a 325 (425)
+.+++++....+
T Consensus 303 ~l~~v~~~~~~~ 314 (422)
T 1q9j_A 303 LASDIVATLRAD 314 (422)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888765554
No 154
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=34.70 E-value=21 Score=30.61 Aligned_cols=32 Identities=9% Similarity=0.328 Sum_probs=25.7
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDY 170 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~ 170 (425)
+.|.+++.++++|||++.-+ .-.|+.+|++.|
T Consensus 68 ~d~~a~~~l~~~Gid~s~h~----ar~l~~~d~~~~ 99 (173)
T 4etm_A 68 PHEGTQEILRREGISFDGML----ARQVSEQDLDDF 99 (173)
T ss_dssp CCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHC
T ss_pred CCHHHHHHHHHCCccccCCc----cccCCHhhcCCC
Confidence 57999999999999998543 235888888765
No 155
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=33.73 E-value=38 Score=32.50 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=28.7
Q ss_pred ceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 37 KATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 37 K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
+...-+.|+.+|.+. ..++.| +.|+.||+|+.+.+
T Consensus 265 ~~~~~v~A~~~G~~~-~~~~~g-~~V~~G~~La~i~d 299 (354)
T 3cdx_A 265 EADAYVMAPRTGLFE-PTHYVG-EEVRTGETAGWIHF 299 (354)
T ss_dssp CGGGEEECSSCEEEE-ESCCTT-CEECTTSEEEEEEC
T ss_pred CCcEEEECCCCEEEE-EeCCCC-CEeCCCCEEEEEEC
Confidence 445568999999765 567899 79999999999876
No 156
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=33.49 E-value=42 Score=29.03 Aligned_cols=22 Identities=9% Similarity=0.302 Sum_probs=18.2
Q ss_pred EEEEecCCCeeeeCCCEEEEEec
Q 014404 51 AKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 51 ~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
.++.++.| +.|+.||+|+.+..
T Consensus 83 ~~i~V~~G-~~V~~Gq~IG~vG~ 104 (182)
T 3it5_A 83 DQIQVSNG-QQVSADTKLGVYAG 104 (182)
T ss_dssp ESCCCCTT-CEECTTCEEEEECS
T ss_pred CccccCCC-CEEcCCCEEEeecC
Confidence 34568999 79999999998854
No 157
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=31.43 E-value=18 Score=36.00 Aligned_cols=31 Identities=16% Similarity=0.130 Sum_probs=25.5
Q ss_pred CCceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 014404 7 TMQEGNIARWLKKEGDKVSPGEVLCEVETDK 37 (425)
Q Consensus 7 ~~~eg~i~~~~v~~Gd~V~~g~~l~~vet~K 37 (425)
.+.-+.=+.++++.||.|++||+|++|=+++
T Consensus 376 ~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 406 (440)
T 2tpt_A 376 TIDYSVGFTDMARLGDQVDGQRPLAVIHAKD 406 (440)
T ss_dssp CCCSSCEEESCCCTTCEEBTTBCSEEEEESS
T ss_pred CCCcCcCeeEeccCCCEECCCCeEEEEecCC
Confidence 3455556789999999999999999997754
No 158
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=31.35 E-value=52 Score=27.05 Aligned_cols=31 Identities=26% Similarity=0.257 Sum_probs=24.8
Q ss_pred EecCCCeEEEEEEe-cCCCeeeeCCCEEEEEec
Q 014404 42 MECMEEGYLAKIVK-GDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 42 i~a~~~G~v~~~~~-~~g~~~v~~g~~l~~~~~ 73 (425)
+.+|.-|.|..+.+ +.| +.|..|++|+.+..
T Consensus 39 ~a~~~lG~i~~V~lp~vG-d~V~~Gd~l~~VEs 70 (136)
T 1zko_A 39 HAQEQLGDVVYVDLPEVG-REVKKGEVVASIES 70 (136)
T ss_dssp HHHHHHCSEEEEECCCTT-CEECTTCEEEEEEE
T ss_pred hhcccCCCcEEEEecCCC-CEEeCCCEEEEEEE
Confidence 34677787877777 999 79999999998853
No 159
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=30.62 E-value=23 Score=34.24 Aligned_cols=17 Identities=29% Similarity=0.401 Sum_probs=8.2
Q ss_pred ecCCCeeeeCCCEEEEEe
Q 014404 55 KGDGSKEIKVGEVIAITV 72 (425)
Q Consensus 55 ~~~g~~~v~~g~~l~~~~ 72 (425)
++.| +.|+.||+|+.+.
T Consensus 286 v~~G-~~V~~G~~Ig~~G 302 (361)
T 2gu1_A 286 VKKG-QLVKRGQKIALAG 302 (361)
T ss_dssp CCTT-CEECTTCEEEECC
T ss_pred cCCc-CEECCCCEEEEEC
Confidence 4445 4555555555443
No 160
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=30.25 E-value=36 Score=27.79 Aligned_cols=29 Identities=10% Similarity=0.030 Sum_probs=24.4
Q ss_pred cCCCeEEEEEEe-cCCCeeeeCCCEEEEEec
Q 014404 44 CMEEGYLAKIVK-GDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 44 a~~~G~v~~~~~-~~g~~~v~~g~~l~~~~~ 73 (425)
.+.-|.|..+.+ +.| +.|..|++|+.+..
T Consensus 32 ~~~lG~i~~v~lp~~G-~~V~~g~~l~~vEs 61 (131)
T 1hpc_A 32 QDHLGEVVFVELPEPG-VSVTKGKGFGAVES 61 (131)
T ss_dssp HHHHCSEEEEECCCTT-CEECBTSEEEEEEE
T ss_pred cccCCCceEEEecCCC-CEEeCCCEEEEEEe
Confidence 577788888877 999 79999999998843
No 161
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=30.22 E-value=28 Score=28.18 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=24.8
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDY 170 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~ 170 (425)
+.|.+.+.++++|||++.-. .-.|+..|+..|
T Consensus 44 ~~p~a~~~l~~~Gid~s~~~----ar~l~~~~~~~~ 75 (131)
T 1jf8_A 44 VNPKAIEAMKEVDIDISNHT----SDLIDNDILKQS 75 (131)
T ss_dssp CCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHC
T ss_pred CCHHHHHHHHHcCCCcccCc----cccCChHHhccC
Confidence 68999999999999997542 235777777653
No 162
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=29.78 E-value=23 Score=33.24 Aligned_cols=9 Identities=22% Similarity=0.195 Sum_probs=5.8
Q ss_pred eeEEeeccc
Q 014404 363 SGILAVGSA 371 (425)
Q Consensus 363 ~ail~vG~i 371 (425)
+-.+++|+.
T Consensus 271 vD~i~vGs~ 279 (294)
T 3c2e_A 271 IDIYSTSSI 279 (294)
T ss_dssp CSEEECGGG
T ss_pred CCEEEEech
Confidence 456777774
No 163
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=29.66 E-value=53 Score=27.98 Aligned_cols=43 Identities=23% Similarity=0.257 Sum_probs=32.9
Q ss_pred eecCCCeEEEEEecceeeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEeccccc
Q 014404 23 KVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEEED 77 (425)
Q Consensus 23 ~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~~~~~ 77 (425)
.+++|+-|+.++. +|+-.-+.+.+| +.|..|+.|+.+.....+
T Consensus 95 ~lkkGt~L~lvpa-----------eG~~V~~i~~~G-~rV~kgd~lA~i~T~KGE 137 (169)
T 3d4r_A 95 YLKAGTKLISVPA-----------EGYKVYPIMDFG-FRVLKGYRLATLESKKGD 137 (169)
T ss_dssp EECTTCBCEEEEE-----------CSSEEEECCCCS-EEECTTCEEEEEECTTCC
T ss_pred EEcCCCEEEEEEe-----------CceEEEEEcCcC-cEeccCCeEEEEEecCce
Confidence 4677777887765 466666788999 799999999998765444
No 164
>3csq_A Morphogenesis protein 1; hydrolase, infection, late protein; 1.80A {Bacteriophage phi-29}
Probab=28.28 E-value=16 Score=34.98 Aligned_cols=21 Identities=14% Similarity=0.223 Sum_probs=17.1
Q ss_pred EEEcCCCCeecCCCeEEEEEe
Q 014404 15 RWLKKEGDKVSPGEVLCEVET 35 (425)
Q Consensus 15 ~~~v~~Gd~V~~g~~l~~vet 35 (425)
++.|++||.|++||+|+.+-+
T Consensus 250 ~~~V~~G~~V~~Gq~Ig~~G~ 270 (334)
T 3csq_A 250 PLPFDVGKKLKKGDLMGHTGI 270 (334)
T ss_dssp SCCCCTTCEECTTSEEEECBC
T ss_pred cccCCCcCEECCCCEEEeecC
Confidence 457899999999999997753
No 165
>2lmc_B DNA-directed RNA polymerase subunit beta; transferase, transcription; NMR {Escherichia coli k-12}
Probab=28.19 E-value=6.5 Score=29.74 Aligned_cols=16 Identities=31% Similarity=0.526 Sum_probs=11.8
Q ss_pred EEcCCCCeecCCCeEE
Q 014404 16 WLKKEGDKVSPGEVLC 31 (425)
Q Consensus 16 ~~v~~Gd~V~~g~~l~ 31 (425)
+.|++||.|++||.|.
T Consensus 67 l~V~eGd~V~~G~~Lt 82 (84)
T 2lmc_B 67 LNVFEGERVERGDVIS 82 (84)
T ss_dssp CSSCTTEEECBSCSSB
T ss_pred eEeCCCCEECCCCCcc
Confidence 3478888888888764
No 166
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=28.03 E-value=6.7e+02 Score=28.07 Aligned_cols=142 Identities=11% Similarity=0.130 Sum_probs=78.0
Q ss_pred cccHHHHHHHHHHHHHhhCCCCCceecCCceeeeCccceEEEeec-C----C-----Ce---EEEE-EecCCCCCHHHHH
Q 014404 250 RISVNDLVIKAAALALRKVPRCNSSWADEYIRQFKNVNINVAVQT-E----N-----GL---YVPV-IRDADKKGLSTIA 315 (425)
Q Consensus 250 klt~~~~likA~~~Al~~~P~ln~~~~~~~i~~~~~i~i~~av~~-~----~-----gl---~~pv-i~~~~~~sl~ei~ 315 (425)
++|++.+++-|.+..|.++- +. +++-+|+.+.. + + |. ++|+ ++-....++.++.
T Consensus 251 ~~T~~~vllaa~a~~L~r~t-------g~-----~dvv~G~pvsgR~~~~~~~~~~vG~fvntlplr~~~~~~~s~~~ll 318 (1304)
T 2vsq_A 251 HTTLSTALQAVWSVLISRYQ-------QS-----GDLAFGTVVSGRPAEIKGVEHMVGLFINVVPRRVKLSEGITFNGLL 318 (1304)
T ss_dssp TCCHHHHHHHHHHHHHHHHH-------TC-----SEEEEEEEECCCCTTSTTGGGCCSSCCEEEEEEEECCTTCBHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhc-------CC-----CCEEEEEEeCCCCccchhhhcccccceeEEEEEecCCCCCcHHHHH
Confidence 48999999999999998752 21 23556776652 1 1 32 3444 3445568999999
Q ss_pred HHHHHHHHHHhcCC----------CCCCCCCCCeEEEeeCCCCCCcc---------ceeeeeCCCCe-eEEeeccceEEe
Q 014404 316 EEVRQLAQKAKDNS----------LKPQDYEGGTFTVTNLGGPFGIK---------QFCAIINPPQS-GILAVGSAEKRV 375 (425)
Q Consensus 316 ~~~~~l~~~a~~~~----------l~~~d~~~~t~tISnlg~~~g~~---------~~~pii~~p~~-ail~vG~i~~~~ 375 (425)
+++++....+.... +....+....|.+.|.+. .+.. ...++-..+.. .-|.+
T Consensus 319 ~~v~~~~~~a~~hq~~p~~~i~~~l~~~~lf~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~dL~l------- 390 (1304)
T 2vsq_A 319 KRLQEQSLQSEPHQYVPLYDIQSQADQPKLIDHIIVFENYPL-QDAKNEESSENGFDMVDVHVFEKSNYDLNL------- 390 (1304)
T ss_dssp HHHHHHHHHHGGGTTSCHHHHHHSSSCSSSCCCEEEECSSCH-HHHSCCCHHHHSEEEEEEEECCCCCSSEEE-------
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHhCCCcccceeEEEeeccc-ccccccccccCCceeEeeecccccccCeEE-------
Confidence 99988766554432 112222333455555431 1100 00010000000 00111
Q ss_pred eecCCCCceeEEeEEEEEEEecccccchHHHHHHHHHHHHHhc
Q 014404 376 VPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIE 418 (425)
Q Consensus 376 v~~~~~g~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le 418 (425)
.+. .++ -+.+.+.||..+.|-..+.++++.|..+|+
T Consensus 391 ~~~-~~~------~l~~~~~y~~~lf~~~~i~~l~~~~~~lL~ 426 (1304)
T 2vsq_A 391 MAS-PGD------EMLIKLAYNENVFDEAFILRLKSQLLTAIQ 426 (1304)
T ss_dssp EEE-CSS------SCEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEe-cCC------cEEEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 011 122 266789999999999999888887776664
No 167
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=27.13 E-value=41 Score=32.11 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=24.9
Q ss_pred EEEEEecccccchHHHHHHHHHHHHHhc
Q 014404 391 SVTLSCDHRVIDGAIGAEWLKAFKGYIE 418 (425)
Q Consensus 391 ~lslt~DHRviDG~~aa~Fl~~l~~~le 418 (425)
-|.+++||-++||.-...|++.|.++..
T Consensus 117 ~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 117 ELTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp EEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 3678999999999999999999988764
No 168
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=26.69 E-value=37 Score=28.30 Aligned_cols=32 Identities=9% Similarity=-0.049 Sum_probs=25.5
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDY 170 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~ 170 (425)
+.|.+++.++++|||++.-+ .-.|+..|+..|
T Consensus 62 ~dp~a~~vl~e~Gidis~h~----ar~l~~~~~~~~ 93 (148)
T 3rh0_A 62 LNQLSVESIAEVGADMSQGI----PKAIDPELLRTV 93 (148)
T ss_dssp CCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHC
T ss_pred CCHHHHHHHHHcCCCcCCCe----eeECCHHHhcCC
Confidence 68999999999999998543 236888888764
No 169
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=26.50 E-value=51 Score=30.01 Aligned_cols=24 Identities=21% Similarity=0.392 Sum_probs=19.6
Q ss_pred EEEEEecCCCeeeeCCCEEEEEecc
Q 014404 50 LAKIVKGDGSKEIKVGEVIAITVEE 74 (425)
Q Consensus 50 v~~~~~~~g~~~v~~g~~l~~~~~~ 74 (425)
+.++.++.| +.|..||+|+.+...
T Consensus 132 L~~i~Vk~G-d~V~~Gq~IG~vG~t 155 (245)
T 3tuf_B 132 LSEVSVEQG-DKVKQNQVIGKSGKN 155 (245)
T ss_dssp ESEESCCTT-CEECTTCEEEECBCC
T ss_pred CCccccCCC-CEECCCCEEEEeCCc
Confidence 335678999 799999999988654
No 170
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=25.64 E-value=13 Score=42.05 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=27.2
Q ss_pred EEcCCCCeecCCCeEEEE--Eecce--------------------eeEEecCCCeEEE
Q 014404 16 WLKKEGDKVSPGEVLCEV--ETDKA--------------------TVEMECMEEGYLA 51 (425)
Q Consensus 16 ~~v~~Gd~V~~g~~l~~v--et~K~--------------------~~~i~a~~~G~v~ 51 (425)
+.|++|+.|+.||+|+.+ |+.|. ..-|-|+.+|+|.
T Consensus 1107 ~~v~~g~~v~~g~vlakip~~~~k~~DIt~GLprv~eLfEar~pk~~a~i~ei~G~v~ 1164 (1407)
T 3lu0_D 1107 VQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIVS 1164 (1407)
T ss_dssp CCCCSSCEECTTCEEECCCCCCCCSSCCCCSHHHHHHHHTTCCCSSCCCCCSSCSCCE
T ss_pred EEecCCCEeccCceEEecchhhccccchhcCcHHHHHHHhccCCCCceEEeccceEEE
Confidence 468999999999999977 45444 1226688999885
No 171
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=24.89 E-value=27 Score=29.36 Aligned_cols=31 Identities=6% Similarity=0.062 Sum_probs=23.9
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIED 169 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~ 169 (425)
+.|.+++.++++|||++... .-.|+.+|+..
T Consensus 51 ~~~~a~~~l~~~Gid~s~~~----ar~l~~~d~~~ 81 (156)
T 2gi4_A 51 MHYGTKNKLAQLNIEHKNFT----SKKLTQKLCDE 81 (156)
T ss_dssp CCHHHHHHHHHTSCSCCCCC----CCBCCHHHHTT
T ss_pred CCHHHHHHHHHcCCCccCCc----cccCCHHHhcc
Confidence 68999999999999998653 23577777643
No 172
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=24.87 E-value=36 Score=28.63 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=24.5
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDY 170 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~ 170 (425)
+.|.+.+.++++|||++ -.. -.|+..|+..|
T Consensus 54 ~~p~a~~~l~e~Gid~s-~~a----r~l~~~~~~~~ 84 (161)
T 2cwd_A 54 MDPRARRVLEEEGAYFP-HVA----RRLTREDVLAY 84 (161)
T ss_dssp CCHHHHHHHHHHTCCCC-CCC----CBCCHHHHHHC
T ss_pred CCHHHHHHHHHcCcCcc-ccc----cCCCHhHhccC
Confidence 68999999999999998 532 35788887654
No 173
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=24.66 E-value=58 Score=30.78 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=27.8
Q ss_pred eeEEecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 39 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
..-+.|+..|.+. -.++.| +.|+.|++|+.+.+
T Consensus 257 ~~~~~a~~~G~~~-~~~~~g-~~V~~G~~la~i~d 289 (332)
T 2qj8_A 257 SDQLKSPSPGIFE-PRCSVM-DEVEQGDVVGVLHP 289 (332)
T ss_dssp GGEEECSSSEEEE-ECSCTT-CEECTTCEEEEEEC
T ss_pred ceEEeCCCCeEEE-EeCCCC-CEeCCCCEEEEEEC
Confidence 3457899999887 667889 79999999999866
No 174
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=24.51 E-value=43 Score=28.47 Aligned_cols=32 Identities=31% Similarity=0.387 Sum_probs=25.0
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDY 170 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~ 170 (425)
+.|.+++.++++|||++... .-.|+..|+..|
T Consensus 65 ~~p~a~~vl~e~Gid~s~~~----sr~l~~~~~~~~ 96 (167)
T 2fek_A 65 ADPTAISVAAEHQLSLEGHC----ARQISRRLCRNY 96 (167)
T ss_dssp CCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHS
T ss_pred CCHHHHHHHHHcCCCccCCc----CccCCHHHhccC
Confidence 68999999999999997543 235777777654
No 175
>3mfy_A V-type ATP synthase alpha chain; A-type ATP synthase, P loop, phenylalanine mutant, hydrolase; 2.35A {Pyrococcus horikoshii} PDB: 3i4l_A* 3i72_A 3i73_A* 3p20_A 3ikj_A 3qg1_A 3nd8_A 3nd9_A 1vdz_A 3qia_A 3qjy_A 3m4y_A 3se0_A 3sdz_A
Probab=24.44 E-value=1.3e+02 Score=30.96 Aligned_cols=54 Identities=30% Similarity=0.377 Sum_probs=39.7
Q ss_pred EcCCCCeecCCCeEEEEEe-cceeeEE--ecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 17 LKKEGDKVSPGEVLCEVET-DKATVEM--ECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet-~K~~~~i--~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
.+++||.|..||.+.+|.- .-.+..| +....|+|..+ ..+| ...+.++++.+..
T Consensus 123 ~~~~gd~v~~G~i~g~v~e~~~~~~~imvpp~~~g~v~~i-~~~g--~~~v~~~i~~i~~ 179 (588)
T 3mfy_A 123 KAKVGDKVVGGDIIGEVPETSIIVHKIMVPPGIEGEIVEI-AEEG--DYTIEEVIAKVKT 179 (588)
T ss_dssp CCCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEEEEEE-CCSE--EECTTSEEEEEEC
T ss_pred ccccCcccccCceEEEEecccceeeeeecCCCCCceEEEe-ccCC--cccccceEEEEec
Confidence 4799999999999998753 3344444 44578999876 4566 4788899887753
No 176
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=24.33 E-value=79 Score=21.67 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=26.7
Q ss_pred ChhHHhHHHHcCCCCCccccCCCCCccchhhHHHHHHh
Q 014404 136 SPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLAS 173 (425)
Q Consensus 136 sP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~~~~~ 173 (425)
+-.+|.-|+++|++.+ ..|||..+=+++|.+.
T Consensus 15 ~~aIR~WAr~nG~~Vs------dRGRIp~~V~eAY~aA 46 (55)
T 2kng_A 15 SAAIREWARRNGHNVS------TRGRIPADVIDAYHAA 46 (55)
T ss_dssp HHHHHHHHHHTTCCCC------SSSCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCcCC------CCCCCCHHHHHHHHHc
Confidence 4579999999999987 3589999988888754
No 177
>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7
Probab=22.99 E-value=17 Score=34.93 Aligned_cols=36 Identities=6% Similarity=-0.045 Sum_probs=23.4
Q ss_pred EcCCCCeecCCCeEEEEEecc-----eeeEEecCCCeEEEE
Q 014404 17 LKKEGDKVSPGEVLCEVETDK-----ATVEMECMEEGYLAK 52 (425)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~K-----~~~~i~a~~~G~v~~ 52 (425)
.++.|+.|++||+|+++-... ..-+|.+|.+|+|..
T Consensus 278 ~~~~g~~V~~G~~La~i~d~~~~~g~~~~~i~aP~~Gvv~g 318 (341)
T 1yw4_A 278 SVENFTLLPDGMLIAEDGAVRYQATGGEERILFPNPAVKPG 318 (341)
T ss_dssp TCCBTEECCSSCCCC--------CCSSCCEEESCCTTCCSS
T ss_pred cCCCcCEeCCCCEEEEECCCceEeCCCceEEEeCCCCceee
Confidence 357899999999999875432 344688888888743
No 178
>3vr4_A V-type sodium ATPase catalytic subunit A; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_A* 3vr2_A* 3vr5_A 3vr6_A*
Probab=22.92 E-value=1.2e+02 Score=31.39 Aligned_cols=53 Identities=23% Similarity=0.370 Sum_probs=40.0
Q ss_pred EcCCCCeecCCCeEEEEEecc-eeeEE--ecCCCeEEEEEEecCCCeeeeCCCEEEEEec
Q 014404 17 LKKEGDKVSPGEVLCEVETDK-ATVEM--ECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 73 (425)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~K-~~~~i--~a~~~G~v~~~~~~~g~~~v~~g~~l~~~~~ 73 (425)
.+++||.|..||.+++|.-.. ....| +....|+|..| .+| ...+-++++.+.+
T Consensus 130 ~~~~Gd~v~~g~i~g~v~e~~~i~h~im~pp~~~g~v~~i--~~g--~~~v~~~v~~i~~ 185 (600)
T 3vr4_A 130 TIEEGTEVSAGDIIGYVDETKIIQHKIMVPNGIKGTVQKI--ESG--SFTIDDPICVIET 185 (600)
T ss_dssp CSCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEEEEEE--CCE--EECTTSCCEEEEE
T ss_pred ccccCCEecCCceEEEEecCCceeeeeecCCCCCceEEEe--cCC--cceeceeEEEEec
Confidence 379999999999999985433 33444 44478999887 677 5788888887753
No 179
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=22.89 E-value=30 Score=28.13 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=23.4
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIED 169 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~ 169 (425)
+.|.+.+.++++|||++... .-.|+..|+..
T Consensus 45 ~~~~a~~~l~e~Gid~s~~~----sr~l~~~~~~~ 75 (134)
T 2l17_A 45 VHPTAIAMMEEVGIDISGQT----SDPIENFNADD 75 (134)
T ss_dssp CCHHHHHHHHTTTCCCSSCC----CCCGGGCCGGG
T ss_pred CCHHHHHHHHHcCCCcccCc----cccCChHHhcc
Confidence 68999999999999997543 23577776654
No 180
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=22.83 E-value=85 Score=17.48 Aligned_cols=18 Identities=28% Similarity=0.543 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 014404 311 LSTIAEEVRQLAQKAKDN 328 (425)
Q Consensus 311 l~ei~~~~~~l~~~a~~~ 328 (425)
+.++.+.++.+.++.|+|
T Consensus 10 ledlqerlrklrkklrsg 27 (27)
T 3twe_A 10 LEDLQERLRKLRKKLRSG 27 (27)
T ss_dssp HHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 455555566665555543
No 181
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=21.82 E-value=35 Score=28.12 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=23.2
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIED 169 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~ 169 (425)
+.|.+.+.++++|||++... .-.++..|+..
T Consensus 49 ~~p~a~~~l~e~Gid~s~~~----sr~l~~~~~~~ 79 (146)
T 1p8a_A 49 PDTRSQKVCKSNGVDISKQR----ARQITKADFSK 79 (146)
T ss_dssp CTHHHHHHHHHHSCCCCCCC----CCCCCSHHHHS
T ss_pred CCHHHHHHHHHcCCChhcCe----eccCCHhHhhc
Confidence 68999999999999997543 22466666653
No 182
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=21.21 E-value=84 Score=31.86 Aligned_cols=32 Identities=9% Similarity=0.148 Sum_probs=29.1
Q ss_pred EEEEEEEecccccchHHHHHHHHHHHHHhcCc
Q 014404 389 FMSVTLSCDHRVIDGAIGAEWLKAFKGYIENP 420 (425)
Q Consensus 389 ~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p 420 (425)
.+.|.|.++|-++||.-+-.|++.|-+.|.++
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~ 208 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSY 208 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTS
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhh
Confidence 36677999999999999999999999999875
No 183
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=21.04 E-value=38 Score=28.15 Aligned_cols=30 Identities=20% Similarity=0.174 Sum_probs=22.8
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIE 168 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~ 168 (425)
+.|.+.+.++++|||++... .-.|+..|+.
T Consensus 51 ~~p~a~~~l~e~Gid~~~~~----ar~l~~~~~~ 80 (150)
T 2wmy_A 51 ADESAIRVAEKNGLCLKGHR----GTKFTSALAR 80 (150)
T ss_dssp CCHHHHHHHHHTTCCCTTCC----CCBCCHHHHT
T ss_pred CCHHHHHHHHHcCCCccCCc----ccCCCHHHhc
Confidence 68999999999999997543 2346666654
No 184
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=20.85 E-value=2.4e+02 Score=20.19 Aligned_cols=44 Identities=11% Similarity=0.115 Sum_probs=30.7
Q ss_pred ccCccEEEEeeeeeHHHHHHHHHHHhhHHHhhcCCcccHHHHHHHHHHHHHhh
Q 014404 215 KQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRK 267 (425)
Q Consensus 215 ~~~iP~~~~~~~iDvt~l~~~rk~~~~~~~~~~g~klt~~~~likA~~~Al~~ 267 (425)
.+..+.|++..+-++-.-++...+. ...|++.++++++.+++.+
T Consensus 16 sr~~~kf~LRlP~eL~~~L~~~A~~---------~grSlNaeIv~~Le~sl~~ 59 (69)
T 3qoq_A 16 SRTADKFVVRLPEGMREQIAEVARS---------HHRSMNSEIIARLEQSLLQ 59 (69)
T ss_dssp TTTSEEEEEECCTTHHHHHHHHHHH---------TTCCHHHHHHHHHHHHHHH
T ss_pred cccCCceEEECCHHHHHHHHHHHHH---------hCCCHHHHHHHHHHHHHHH
Confidence 3567888888876554443333322 2479999999999999975
No 185
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=20.74 E-value=39 Score=27.58 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=23.1
Q ss_pred cChhHHhHHHHcCCCCCccccCCCCCccchhhHHH
Q 014404 135 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIED 169 (425)
Q Consensus 135 asP~aR~lA~e~gIdl~~v~gtG~~GrI~~~DV~~ 169 (425)
+.|.+.+.++++|||++.-. .-.|+..|+..
T Consensus 44 ~~p~a~~~l~~~Gid~s~~~----sr~l~~~~~~~ 74 (139)
T 1jl3_A 44 LNPNAVKAMKEVGIDISNQT----SDIIDSDILNN 74 (139)
T ss_dssp CCHHHHHHHHHTTCCCTTCC----CCBCCHHHHTT
T ss_pred CCHHHHHHHHHcCCCcccCc----cCcCCHHHhhc
Confidence 68999999999999997542 23466666543
No 186
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=20.27 E-value=81 Score=30.23 Aligned_cols=15 Identities=7% Similarity=0.109 Sum_probs=11.3
Q ss_pred eEEecCCCeEEEEEE
Q 014404 40 VEMECMEEGYLAKIV 54 (425)
Q Consensus 40 ~~i~a~~~G~v~~~~ 54 (425)
..|.|+.+|+|....
T Consensus 243 t~V~A~~~G~V~~~~ 257 (361)
T 2gu1_A 243 APVYSTGDGKVIVVR 257 (361)
T ss_dssp CEEECSSSEEEEEEE
T ss_pred CeEEEeeCEEEEEeE
Confidence 468888888887654
Done!