Your job contains 1 sequence.
>014411
MAATSSTATTHLIVGSTSRLHNTRTTKFFQNGVVLTQKKTLSLRRRRSASIPPTAVLPFD
LSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGD
DRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSIT
EMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSVNGM
PITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAVPMGSNAWEKLRIIKGRPAPGKEL
TNEFNVLEAGLWNSISLDKGCYKGQETISRLITYDGLKQRLWGICLSAPAEPGSPIIVDG
KKVGKLTSYTLGRKESDHFGLGYIKRKDALGGDTVTVGDNIVGTVVEVPFLARQSPPLLS
KSSSS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014411
(425 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206051 - symbol:AT1G60990 species:3702 "Arabi... 1454 6.2e-149 1
TIGR_CMR|CHY_0489 - symbol:CHY_0489 "glycine cleavage sys... 253 4.1e-20 1
TIGR_CMR|SPO_3396 - symbol:SPO_3396 "FAD dependent oxidor... 244 1.2e-17 1
TIGR_CMR|BA_4449 - symbol:BA_4449 "glycine cleavage syste... 205 5.0e-14 1
UNIPROTKB|F1RF50 - symbol:DMGDH "Uncharacterized protein"... 206 2.6e-13 1
MGI|MGI:1921379 - symbol:Dmgdh "dimethylglycine dehydroge... 200 1.2e-12 1
UNIPROTKB|F1MDJ6 - symbol:DMGDH "Uncharacterized protein"... 189 2.0e-11 1
UNIPROTKB|F1PK75 - symbol:DMGDH "Uncharacterized protein"... 185 4.9e-11 1
UNIPROTKB|F1PKA8 - symbol:DMGDH "Uncharacterized protein"... 185 5.3e-11 1
UNIPROTKB|P64220 - symbol:gcvT "Aminomethyltransferase" s... 175 1.4e-10 1
UNIPROTKB|E1BSV1 - symbol:DMGDH "Uncharacterized protein"... 180 2.0e-10 1
RGD|620453 - symbol:Dmgdh "dimethylglycine dehydrogenase"... 179 2.5e-10 1
UNIPROTKB|Q63342 - symbol:Dmgdh "Dimethylglycine dehydrog... 179 2.5e-10 1
UNIPROTKB|Q9UI17 - symbol:DMGDH "Dimethylglycine dehydrog... 178 3.3e-10 1
UNIPROTKB|P49364 - symbol:GDCST "Aminomethyltransferase, ... 172 4.1e-10 1
TAIR|locus:2008900 - symbol:AT1G11860 species:3702 "Arabi... 171 5.4e-10 1
TIGR_CMR|SPO_1246 - symbol:SPO_1246 "aminomethyl transfer... 155 5.6e-09 1
TIGR_CMR|SPO_3400 - symbol:SPO_3400 "aminomethyl transfer... 165 8.1e-09 1
DICTYBASE|DDB_G0292326 - symbol:gcvT "aminomethyltransfer... 159 1.2e-08 1
POMBASE|SPAC31G5.14 - symbol:gcv1 "glycine decarboxylase ... 156 2.3e-08 1
TIGR_CMR|GSU_0375 - symbol:GSU_0375 "glycine cleavage sys... 155 2.5e-08 1
ASPGD|ASPL0000076695 - symbol:AN8654 species:162425 "Emer... 159 4.5e-08 1
TIGR_CMR|SPO_A0311 - symbol:SPO_A0311 "FAD dependent oxid... 154 1.3e-07 1
TIGR_CMR|SPO_0635 - symbol:SPO_0635 "aminomethyl transfer... 152 2.2e-07 1
TIGR_CMR|SPO_A0063 - symbol:SPO_A0063 "FAD dependent oxid... 144 3.2e-07 2
UNIPROTKB|O53825 - symbol:MT0832 "Conserved protein" spec... 145 3.5e-07 1
TIGR_CMR|CPS_3841 - symbol:CPS_3841 "glycine cleavage sys... 141 1.0e-06 1
ZFIN|ZDB-GENE-080227-8 - symbol:dmgdh "dimethylglycine de... 145 1.4e-06 1
UNIPROTKB|P28337 - symbol:AMT "Aminomethyltransferase, mi... 140 1.5e-06 1
WB|WBGene00021355 - symbol:Y37E3.17 species:6239 "Caenorh... 142 2.8e-06 1
MGI|MGI:3646700 - symbol:Amt "aminomethyltransferase" spe... 136 4.3e-06 1
UNIPROTKB|Q8EIH8 - symbol:ygfZ "Folate-dependent protein ... 133 5.7e-06 1
TIGR_CMR|SO_0861 - symbol:SO_0861 "conserved hypothetical... 133 5.7e-06 1
TIGR_CMR|SPO_1648 - symbol:SPO_1648 "aminomethyl transfer... 134 6.0e-06 1
WB|WBGene00017765 - symbol:gcst-1 species:6239 "Caenorhab... 134 7.1e-06 1
UNIPROTKB|B4E1J9 - symbol:DMGDH "cDNA FLJ50354, highly si... 132 1.1e-05 1
WB|WBGene00013718 - symbol:Y106G6H.5 species:6239 "Caenor... 136 1.3e-05 1
RGD|1359408 - symbol:Amt "aminomethyltransferase" species... 131 1.5e-05 1
SGD|S000002426 - symbol:GCV1 "T subunit of the mitochondr... 130 2.0e-05 1
UNIPROTKB|F8W6P8 - symbol:DMGDH "Dimethylglycine dehydrog... 132 2.1e-05 1
TIGR_CMR|CPS_4132 - symbol:CPS_4132 "putative aminomethyl... 128 2.2e-05 1
UNIPROTKB|Q8TCC6 - symbol:DMGDH "Dimethylglycine dehydrog... 132 2.3e-05 1
TIGR_CMR|SPO_A0057 - symbol:SPO_A0057 "glycine cleavage s... 128 2.8e-05 1
FB|FBgn0032287 - symbol:CG6415 species:7227 "Drosophila m... 126 5.7e-05 1
UNIPROTKB|D4A8Z7 - symbol:Sardh "Sarcosine dehydrogenase,... 124 0.00013 1
TIGR_CMR|SPO_0207 - symbol:SPO_0207 "aminomethyl transfer... 126 0.00015 1
TIGR_CMR|CPS_1274 - symbol:CPS_1274 "glycine cleavage sys... 120 0.00021 1
ZFIN|ZDB-GENE-040426-996 - symbol:sardh "sarcosine dehydr... 116 0.00024 2
RGD|621125 - symbol:Sardh "sarcosine dehydrogenase" speci... 124 0.00029 1
UNIPROTKB|Q64380 - symbol:Sardh "Sarcosine dehydrogenase,... 124 0.00029 1
UNIPROTKB|D4A9I9 - symbol:Sardh "Sarcosine dehydrogenase,... 124 0.00029 1
TIGR_CMR|CBU_1716 - symbol:CBU_1716 "glycine cleavage sys... 118 0.00036 1
UNIPROTKB|H0Y695 - symbol:AMT "Aminomethyltransferase" sp... 117 0.00051 1
UNIPROTKB|P48728 - symbol:AMT "Aminomethyltransferase, mi... 117 0.00055 1
ZFIN|ZDB-GENE-041010-114 - symbol:amt "aminomethyltransfe... 117 0.00056 1
UNIPROTKB|F1NG59 - symbol:PDPR "Uncharacterized protein" ... 121 0.00060 1
UNIPROTKB|P25285 - symbol:AMT "Aminomethyltransferase, mi... 116 0.00069 1
>TAIR|locus:2206051 [details] [associations]
symbol:AT1G60990 species:3702 "Arabidopsis thaliana"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IGI] InterPro:IPR006222 Pfam:PF01571 EMBL:CP002684
GO:GO:0009507 eggNOG:COG0354 InterPro:IPR017703 TIGRFAMs:TIGR03317
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
UniGene:At.36556 UniGene:At.71340 EMBL:AK175484 IPI:IPI00536295
RefSeq:NP_001077748.1 RefSeq:NP_001117522.1 RefSeq:NP_176295.3
ProteinModelPortal:Q681Y3 PaxDb:Q681Y3 PRIDE:Q681Y3
EnsemblPlants:AT1G60990.1 EnsemblPlants:AT1G60990.2
EnsemblPlants:AT1G60990.3 GeneID:842391 KEGG:ath:AT1G60990
TAIR:At1g60990 HOGENOM:HOG000232517 InParanoid:Q681Y3 OMA:RLSWLHS
PhylomeDB:Q681Y3 ProtClustDB:CLSN2681534 Genevestigator:Q681Y3
Uniprot:Q681Y3
Length = 432
Score = 1454 (516.9 bits), Expect = 6.2e-149, P = 6.2e-149
Identities = 281/409 (68%), Positives = 331/409 (80%)
Query: 14 VGSTSRLHNTRTTKFFQNGVVLTQKKTLSLR----RRRSASIPPTAV----LPFDLSPPP 65
+ S S + NT NG VL ++++LSLR R R + + L FD SPPP
Sbjct: 16 IDSVSHITNTALLPCLYNGTVL-RRRSLSLRKCGFRERKFQLRCVSASSDSLQFDFSPPP 74
Query: 66 IDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
IDHD L+T+ G K+S +G+VE+F ND EALDA DNGV VDLSHFGRIRVSGDDR F
Sbjct: 75 IDHDFLDTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAHF 134
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
LHNQ+TANFE L EGQGCDTVFVTPTARTIDIAHAWIMKNA++L VSP TC SI EMLNK
Sbjct: 135 LHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLNK 194
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSVNGMPITVG 245
Y+FFADKVEI+DITKQTCLF + GPKSNQ+M LNLGDL+G+ YG H+HYS +GMPITVG
Sbjct: 195 YIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGRHQHYSFDGMPITVG 254
Query: 246 VGNVISEEGFSLLMSPAAAGSVWETLLSQGAVPMGSNAWEKLRIIKGRPAPGKELTNEFN 305
VG++IS+EGF++LMSP A SVW+TLL++GA+PMGS AWEKLRI +GRPAP +EL+ EFN
Sbjct: 255 VGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERELSKEFN 314
Query: 306 VLEAGLWNSISLDKGCYKGQETISRLITYDGLKQRLWGICLSAPAEPGSPIIVDGKKVGK 365
VLEAGLWNSISL+KGCYKGQETI+RL+TYDG+KQRL G+ LSAP+EPGS I VDGKKVGK
Sbjct: 315 VLEAGLWNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVDGKKVGK 374
Query: 366 LTSYTLGRKESDHFGLGYIKRKDALGGDTVTVGDNIVGTVVEVPFLARQ 414
LTSYT G+ S HFGLGYIK++ A G+TVTVG++I G V EVP+LARQ
Sbjct: 375 LTSYTGGKNGSGHFGLGYIKKQAASIGNTVTVGEDISGIVSEVPYLARQ 423
>TIGR_CMR|CHY_0489 [details] [associations]
symbol:CHY_0489 "glycine cleavage system T protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004047 "aminomethyltransferase activity" evidence=ISS]
[GO:0019464 "glycine decarboxylation via glycine cleavage system"
evidence=ISS] InterPro:IPR006222 InterPro:IPR006223
InterPro:IPR022903 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
TIGRFAMs:TIGR00528 HAMAP:MF_00259 RefSeq:YP_359347.1 HSSP:P27248
ProteinModelPortal:Q3AET7 SMR:Q3AET7 STRING:Q3AET7 GeneID:3727042
KEGG:chy:CHY_0489 PATRIC:21274127 OMA:KPAFWGR
BioCyc:CHYD246194:GJCN-490-MONOMER Uniprot:Q3AET7
Length = 360
Score = 253 (94.1 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 82/322 (25%), Positives = 142/322 (44%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID-- 156
A V D+SH G I ++G +F++ T + L G T P T+D
Sbjct: 41 AVRTDVGMFDVSHMGEIEITGKQAERFVNYLITNDVSRLNSGDVIYTTMCYPDGGTVDDL 100
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+A+ + + +++V + + +L +Y + D V + D++ +T + GP++ +++
Sbjct: 101 LAYKYSTERYLLVVNAANKDKDLAHIL-QYRW--DDVTVTDLSDETAEIALQGPRAQEIL 157
Query: 217 RDLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGA 276
+ L DL Y V G+P V E+GF + +P A +W LL+ G
Sbjct: 158 QKLTAFDLNQIKYFGFAEIEVAGVPCLVSRTGYTGEDGFEIYFAPNLATKIWNELLNLGV 217
Query: 277 VPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGCYKGQETISRLITYDG 336
P G A + LR P G EL+ E LEAGL ++ +K + G+E + G
Sbjct: 218 KPAGLGARDTLRFEACLPLYGHELSAEITPLEAGLGWAVKFNKEDFIGKEALLAQKNA-G 276
Query: 337 LKQRLWGICLSAPAEP--GSPIIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGDT 394
LK+++ G+ + P G I+ + + VG +TS T + + + + A G
Sbjct: 277 LKRKIVGLEMIGAGIPRQGYEIVFNQRGVGFVTSGTFAPFLKKNLAMAMVDLEAAEIGTE 336
Query: 395 VTV---GDNIVGTVVEVPFLAR 413
V V G + V+ PF R
Sbjct: 337 VDVIIRGKGVRARVISRPFYKR 358
>TIGR_CMR|SPO_3396 [details] [associations]
symbol:SPO_3396 "FAD dependent oxidoreductase/aminomethyl
transferase" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=ISS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716 OMA:DWFDIVG
KO:K00314 ProtClustDB:CLSK863205 RefSeq:YP_168592.1
ProteinModelPortal:Q5LN16 GeneID:3195707 KEGG:sil:SPO3396
PATRIC:23380247 Uniprot:Q5LN16
Length = 816
Score = 244 (91.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 92/332 (27%), Positives = 155/332 (46%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A G+ D+S FG+IRV G D +L++ + F++ G+ T F+
Sbjct: 472 FDNVAEEHKAIRTGLGMYDMSSFGKIRVEGPDATAYLNHIAGGQFDV-PVGRIVYTQFLN 530
Query: 150 PTART-IDIAHAWIMKNAVILVVSPLT-CSSITEMLNKYVFFADKVEIQDITKQTCLFVV 207
D+ + + A ++V T + T M+ F +V I D+T + V
Sbjct: 531 VNGGIEADVTVTRLSETAYLVVTPAATRYADQTRMMRLVGDF--RVVITDVTAGEGVLAV 588
Query: 208 VGPKSNQVMRDLNLGDLVGEA--YGTHRHYSVNGMPIT-VGVGNVISEEGFSLLMSPAAA 264
+GPK+ ++M ++ D + +GT + + GM + V + E G+ + +S A
Sbjct: 589 MGPKARELMARVSPNDFSNDVNPFGTAQEIEL-GMGLARVHRVTYVGELGWEIYVSSDMA 647
Query: 265 GSVWETLLSQGA-VPM---GSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKG 320
G +ETL G + M G + + RI K G ++T E +VLEAGL ++ DK
Sbjct: 648 GHAFETLFEAGQDLGMKLCGMHVMDCCRIEKAFRHFGHDITPEDHVLEAGLGFAVKTDKP 707
Query: 321 CYKGQETISRLITYDGLKQRLWGICLSAPAEP----GSPIIVDGKKVGKLTSYTLGRKES 376
+ G++ + R +GLK R+ L+ P EP P++ DG+ VG L+S G
Sbjct: 708 DFIGRDAVLRKKD-EGLKTRMVQFRLTDP-EPLLYHNEPLLRDGQIVGYLSSGAYGHHLG 765
Query: 377 DHFGLGYIKRKDALGGDTV--TVGDNIVGTVV 406
G+GY+ + D + T +++GT V
Sbjct: 766 SAIGMGYVPCEGESAADVLASTYEIDVMGTRV 797
>TIGR_CMR|BA_4449 [details] [associations]
symbol:BA_4449 "glycine cleavage system T protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 TIGRFAMs:TIGR00528
RefSeq:NP_846677.1 RefSeq:YP_021093.1 RefSeq:YP_030380.1
ProteinModelPortal:Q81M06 SMR:Q81M06 IntAct:Q81M06 DNASU:1087845
EnsemblBacteria:EBBACT00000011986 EnsemblBacteria:EBBACT00000017692
EnsemblBacteria:EBBACT00000020316 GeneID:1087845 GeneID:2818765
GeneID:2849651 KEGG:ban:BA_4449 KEGG:bar:GBAA_4449 KEGG:bat:BAS4131
HOGENOM:HOG000239381 OMA:LGARDVC ProtClustDB:PRK00389
BioCyc:BANT260799:GJAJ-4187-MONOMER
BioCyc:BANT261594:GJ7F-4328-MONOMER HAMAP:MF_00259 Uniprot:Q81M06
Length = 366
Score = 205 (77.2 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 79/336 (23%), Positives = 137/336 (40%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + V G D + FL T + L+ G T
Sbjct: 32 FSSIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCY 91
Query: 150 PTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T+D + + +LV++ E L +V D + +++ + +
Sbjct: 92 ENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHVI-GDATVV-NVSSEVAQLAIQ 149
Query: 209 GPKSNQVMRDLNLGDLVGEAYGTHRH-YSVNGMPITVGVGNVISEEGFSLLMSPAAAGSV 267
GPK+ +++ + DL + ++ V+G+P V E+GF + A +
Sbjct: 150 GPKAEGILQKVVSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKL 209
Query: 268 WETLLSQGAVP----MGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-Y 322
WE LL GA G A + LR P G+EL+ + +EAG+ ++ +K +
Sbjct: 210 WEKLLEVGAEEGLKACGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEADF 269
Query: 323 KGQETISRLITYDGLKQRLWGICLSAPAEPGS--PIIVDGKKVGKLTSYTLGRKESDHFG 380
G+ T+ +G ++L GI + P + P+ + +K+G++TS T G
Sbjct: 270 FGKATLKEQ-KENGAPRKLVGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIG 328
Query: 381 LGYIKRKDALGGDTVTV---GDNIVGTVVEVPFLAR 413
L I K A V + + VV PF R
Sbjct: 329 LALIDVKYAAVDTEVEIEIRNKRVKAVVVPTPFYKR 364
>UNIPROTKB|F1RF50 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:CU468550 Ensembl:ENSSSCT00000015413 ArrayExpress:F1RF50
Uniprot:F1RF50
Length = 866
Score = 206 (77.6 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 87/328 (26%), Positives = 149/328 (45%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTV--FVTPTART---IDIA 158
V +DLS FG+ V G D ++ L + AN ++ + GC + +TP R D +
Sbjct: 529 VGVIDLSPFGKFTVKGQDSVRLL-DHLFAN--VIPQ-VGCTNISHMLTPKGRVYAEFDCS 584
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
H +V S +T +SI + + V VEI+++T + V GP + +V++
Sbjct: 585 HQ-SPTQSVSPEKSSVTITSIKWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVLQK 643
Query: 219 LNLGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS--- 273
L DL A+ + + V +P+T + E G+ L + ++++ +++
Sbjct: 644 LTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWELYHRREDSAALYDIIMNAGQ 703
Query: 274 -QGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRL 331
+G G+ A LR+ K A G E+ + N LEAGL + L+K + G++ + +
Sbjct: 704 EEGIDNFGTYAMNALRLEKAFRAWGSEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQ- 762
Query: 332 ITYDGLKQRLWGICLSAPAEPGSP-----IIVDGKKVGKLTSYTLGRKESDHFGLGYIKR 386
I GLK+RL +CL+ + P I DGK VG TS + Y+
Sbjct: 763 IKAKGLKRRL--VCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPV 820
Query: 387 KDALGGDTVTV---GDNIVGTVVEVPFL 411
+ + G V V G N TV++ P +
Sbjct: 821 ELSKVGQQVEVELLGKNYPATVIQEPLV 848
>MGI|MGI:1921379 [details] [associations]
symbol:Dmgdh "dimethylglycine dehydrogenase precursor"
species:10090 "Mus musculus" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005542 "folic acid binding"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006544 "glycine metabolic
process" evidence=ISO] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0047865 "dimethylglycine dehydrogenase activity" evidence=ISO]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
UniPathway:UPA00291 MGI:MGI:1921379 GO:GO:0005739 GO:GO:0050660
EMBL:AC131739 GO:GO:0006579 EMBL:CT030023 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005542
eggNOG:COG0665 CTD:29958 HOGENOM:HOG000251716 HOVERGEN:HBG081945
KO:K00315 OMA:REVGKMI OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:AK004755
EMBL:BC024126 IPI:IPI00120123 RefSeq:NP_083048.1 UniGene:Mm.21789
ProteinModelPortal:Q9DBT9 SMR:Q9DBT9 STRING:Q9DBT9
PhosphoSite:Q9DBT9 PaxDb:Q9DBT9 PRIDE:Q9DBT9
Ensembl:ENSMUST00000048001 GeneID:74129 KEGG:mmu:74129
UCSC:uc007rll.1 GeneTree:ENSGT00530000063120 InParanoid:B1B1D0
NextBio:339854 Bgee:Q9DBT9 CleanEx:MM_DMGDH Genevestigator:Q9DBT9
GermOnline:ENSMUSG00000042102 Uniprot:Q9DBT9
Length = 869
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 82/325 (25%), Positives = 147/325 (45%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHAWI 162
V +DLS FG+ + G D Q L + AN I + G + +TP R ++ +
Sbjct: 522 VGVIDLSPFGKFNIKGRDSTQLL-DHLFANV-IPKVGFTNISHMLTPRGRVYAELTVSQQ 579
Query: 163 MKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+L+ + + + F VEIQ+IT + + V GP + +V++ L
Sbjct: 580 SPGEFLLITGSGSELHDLRWIEEAAFRGGYDVEIQNITDEFGVLGVAGPYARRVLQKLTS 639
Query: 222 GDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS----QG 275
DL +A+ + ++++ +P+T + E G+ L + +++E ++S +G
Sbjct: 640 EDLSDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDSATLYERIMSAGQEEG 699
Query: 276 AVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRLITY 334
G+ A LR+ K A G E+ + N LEAGL + L+K + G++ + ++ T
Sbjct: 700 IGDFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKT- 758
Query: 335 DGLKQRLWGICLSAPAEPGSP-----IIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKDA 389
+GLK+RL +CL+ + P I GK VG TS + Y+ + +
Sbjct: 759 EGLKRRL--VCLTVATDDVDPEGNESIWYKGKVVGNTTSGSYSYSIQKSLAFAYVPVQLS 816
Query: 390 LGGDTVTV---GDNIVGTVVEVPFL 411
G V V G N T+++ P +
Sbjct: 817 EVGQQVEVELLGKNYPATIIQEPLV 841
>UNIPROTKB|F1MDJ6 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:DAAA02027819 IPI:IPI00715285 Ensembl:ENSBTAT00000036611
Uniprot:F1MDJ6
Length = 866
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 83/327 (25%), Positives = 146/327 (44%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHA 160
V +DLS FG+ + G D I+ L + AN I + G + +TP R + ++H
Sbjct: 529 VGVIDLSPFGKFNIKGQDSIRLL-DHLFANV-IPKVGFTNISHMLTPKGRVYAELTVSHQ 586
Query: 161 WIMKNAVILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+LV S + + + + VEI++IT + + V GP S +V++ L
Sbjct: 587 --SPGEFLLVTGSGSELHDLRWIEEEAIKGGYDVEIKNITDELGVLGVAGPYSRKVLQKL 644
Query: 220 NLGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS---- 273
DL + + V+ +P+T + E G+ L + ++++ +++
Sbjct: 645 TSEDLSDNVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSAALYDAIMNAGQE 704
Query: 274 QGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRLI 332
+G G+ A LR+ K A G E+ + N LEAGL + + L+K + G++ + + I
Sbjct: 705 EGIDNFGTYAMNALRLEKAFRAWGSEMNCDTNPLEAGLESFVKLNKPADFIGKQALKQ-I 763
Query: 333 TYDGLKQRLWGICLSAPAEPGSP-----IIVDGKKVGKLTSYTLGRKESDHFGLGYIKRK 387
GLK+RL +CL+ + P I DGK VG TS + + Y+ +
Sbjct: 764 KAKGLKRRL--VCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYRIQKSLVFAYVPVE 821
Query: 388 DALGGDTVTV---GDNIVGTVVEVPFL 411
+ G V V G N V++ P +
Sbjct: 822 LSKVGQQVEVELLGKNYPAVVIQEPLV 848
>UNIPROTKB|F1PK75 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 EMBL:AAEX03002116
EMBL:AAEX03002117 EMBL:AAEX03002118 Ensembl:ENSCAFT00000014573
Uniprot:F1PK75
Length = 794
Score = 185 (70.2 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 80/326 (24%), Positives = 145/326 (44%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHA 160
V +DLS FG+ + G D ++ L + AN I + G + +TP R + ++H
Sbjct: 457 VGVIDLSPFGKFNIKGQDSVRLL-DHLFANV-IPKVGFTNISHMLTPKGRVYAELTVSHQ 514
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+++ S + + + V VEI++IT + + + GP + +V++ L
Sbjct: 515 -TPGEFLLITGSGSELHDLRWIEEEAVNGGYDVEIKNITDELGVLGIAGPHARKVLQKLT 573
Query: 221 LGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS----Q 274
DL + + + V+ +P+T + E G+ L + ++++ ++ +
Sbjct: 574 AEDLSDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDIVMDAGQEE 633
Query: 275 GAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRLIT 333
G G+ A LR+ K A G E+ + N LEAGL I L+K + G++ + + I
Sbjct: 634 GIDNFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLDYFIKLNKPADFIGKQALKQ-IK 692
Query: 334 YDGLKQRLWGICLSAPAEPGSP-----IIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKD 388
GLK+RL +CL+ + P I DGK VG TS T Y+ +
Sbjct: 693 AKGLKRRL--VCLTLATDDVDPEGNESIWFDGKVVGNTTSGTYSYSIQKSLAFAYVPIEL 750
Query: 389 ALGGDTVTV---GDNIVGTVVEVPFL 411
+ G V V G N ++++ P +
Sbjct: 751 SKVGQQVEVELLGRNYPASIIQEPLV 776
>UNIPROTKB|F1PKA8 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 OMA:REVGKMI GeneTree:ENSGT00530000063120
EMBL:AAEX03002116 EMBL:AAEX03002117 EMBL:AAEX03002118
Ensembl:ENSCAFT00000014548 Uniprot:F1PKA8
Length = 838
Score = 185 (70.2 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 80/326 (24%), Positives = 145/326 (44%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHA 160
V +DLS FG+ + G D ++ L + AN I + G + +TP R + ++H
Sbjct: 502 VGVIDLSPFGKFNIKGQDSVRLL-DHLFANV-IPKVGFTNISHMLTPKGRVYAELTVSHQ 559
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+++ S + + + V VEI++IT + + + GP + +V++ L
Sbjct: 560 -TPGEFLLITGSGSELHDLRWIEEEAVNGGYDVEIKNITDELGVLGIAGPHARKVLQKLT 618
Query: 221 LGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS----Q 274
DL + + + V+ +P+T + E G+ L + ++++ ++ +
Sbjct: 619 AEDLSDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDIVMDAGQEE 678
Query: 275 GAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRLIT 333
G G+ A LR+ K A G E+ + N LEAGL I L+K + G++ + + I
Sbjct: 679 GIDNFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLDYFIKLNKPADFIGKQALKQ-IK 737
Query: 334 YDGLKQRLWGICLSAPAEPGSP-----IIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKD 388
GLK+RL +CL+ + P I DGK VG TS T Y+ +
Sbjct: 738 AKGLKRRL--VCLTLATDDVDPEGNESIWFDGKVVGNTTSGTYSYSIQKSLAFAYVPIEL 795
Query: 389 ALGGDTVTV---GDNIVGTVVEVPFL 411
+ G V V G N ++++ P +
Sbjct: 796 SKVGQQVEVELLGRNYPASIIQEPLV 821
>UNIPROTKB|P64220 [details] [associations]
symbol:gcvT "Aminomethyltransferase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0040007 GO:GO:0005618
GO:GO:0008483 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842579 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 OMA:KPAFWGR PIR:D70786
RefSeq:NP_216727.1 RefSeq:NP_336739.1 RefSeq:YP_006515631.1
ProteinModelPortal:P64220 SMR:P64220
EnsemblBacteria:EBMYCT00000003464 EnsemblBacteria:EBMYCT00000070612
GeneID:13318900 GeneID:887233 GeneID:924158 KEGG:mtc:MT2267
KEGG:mtu:Rv2211c KEGG:mtv:RVBD_2211c PATRIC:18126736
TubercuList:Rv2211c Uniprot:P64220
Length = 367
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 78/318 (24%), Positives = 134/318 (42%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID- 156
+A V D+SH G+ V G QF+++ T + + G+ T+ T + ID
Sbjct: 43 NATRTAVGLFDVSHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDD 102
Query: 157 -IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
IA+ ++ + + LV + +++ L + I ++ + + V GP S V
Sbjct: 103 LIAY-YVSDDEIFLVPNAANTAAVVGALQAAA--PGGLSITNLHRSYAVLAVQGPCSTDV 159
Query: 216 MRDLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQ- 274
+ L L + Y + S +G+P+ V E G+ LL +AG V++ LL+
Sbjct: 160 LTALGLPTEMD--YMGYADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAV 217
Query: 275 ---GAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGCYKGQETISRL 331
G P G A + LR G P G EL+ + + L+A ++ K + G+ +
Sbjct: 218 SAAGGEPAGLGARDTLRTEMGYPLHGHELSLDISPLQARCGWAVGWRKDAFFGRAALLAE 277
Query: 332 ITYDGLKQRLWGICLSAPA--EPGSPIIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKDA 389
G ++ L G+ + PG ++V + VG TS T GL I DA
Sbjct: 278 KAA-GPRRLLRGLRMVGRGVLRPGLAVLVGDETVGVTTSGTFSPTLQVGIGLALID-SDA 335
Query: 390 LGGDTVTVGDNIVGTVVE 407
D + ++ G VE
Sbjct: 336 GIEDGQQINVDVRGRAVE 353
>UNIPROTKB|E1BSV1 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0047865 "dimethylglycine
dehydrogenase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:AADN02046136 EMBL:AADN02046137 EMBL:AADN02046138
EMBL:AADN02046139 EMBL:AADN02046140 EMBL:AADN02046141
EMBL:AADN02046142 IPI:IPI00588243 ProteinModelPortal:E1BSV1
Ensembl:ENSGALT00000007151 Uniprot:E1BSV1
Length = 862
Score = 180 (68.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 79/322 (24%), Positives = 145/322 (45%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHN--QSTANFEILREGQGCDTVFVTPTARTI-DIAHAWIM 163
+DLS FG+ +V G D ++ L + + AN + G + +TP + ++ + +
Sbjct: 528 IDLSPFGKFKVKGTDSVKLLDHLFANVAN----KVGSTNISHMLTPKGKVYAELTVSQLY 583
Query: 164 KNAVILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+LV S + + + V KVEI+++T + + V GP + QV++ L
Sbjct: 584 PGEFMLVTGSGSELHDLRWIEEEVVRGGYKVEIENMTDEMGVLGVAGPYARQVLQRLTAE 643
Query: 223 DLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLM----SPAAAGSVWETLLSQGA 276
DL ++ RH ++ + +T + E G+ L S A ++ + +G
Sbjct: 644 DLSDGSFKFLQSRHLKLSDIAVTAIRISYTGELGWELYHRKEDSVALYNAIMDAGQKEGI 703
Query: 277 VPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRLITYD 335
G+ A LR+ KG A G E+ + N LEAGL + L+K + G++ + + I
Sbjct: 704 DNFGTYALNALRLEKGFRAWGAEMNCDTNPLEAGLEYFVKLNKPADFIGKKMLKQ-IKEK 762
Query: 336 GLKQRLWGICLSAP-AEP-GSPIIV-DGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGG 392
GLK+RL + L +P G+ + +GK +G TS + Y+ + + G
Sbjct: 763 GLKRRLVYLTLETDDVDPEGNESVWHNGKVIGNTTSGSFSYSAKQSLAFAYVPTELSKVG 822
Query: 393 DTVTV---GDNIVGTVVEVPFL 411
+ V G N T+++ P +
Sbjct: 823 QKLEVELLGKNYSATIIQEPLV 844
>RGD|620453 [details] [associations]
symbol:Dmgdh "dimethylglycine dehydrogenase" species:10116
"Rattus norvegicus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005542 "folic acid binding" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO;IDA;TAS] [GO:0006544
"glycine metabolic process" evidence=ISO] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0006579 "amino-acid betaine
catabolic process" evidence=IEA] [GO:0019695 "choline metabolic
process" evidence=TAS] [GO:0042426 "choline catabolic process"
evidence=TAS] [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA;ISO;IDA;TAS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA;TAS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291 RGD:620453
GO:GO:0005739 GO:GO:0050660 GO:GO:0042426 GO:GO:0006579
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0005542 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:X55995
IPI:IPI00207941 PIR:S16133 UniGene:Rn.3646
ProteinModelPortal:Q63342 STRING:Q63342 PhosphoSite:Q63342
PRIDE:Q63342 UCSC:RGD:620453 InParanoid:Q63342
BioCyc:MetaCyc:MONOMER-16117 BRENDA:1.5.99.2 ArrayExpress:Q63342
Genevestigator:Q63342 GermOnline:ENSRNOG00000023588 Uniprot:Q63342
Length = 857
Score = 179 (68.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 79/326 (24%), Positives = 143/326 (43%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHA 160
V +DLS FG+ + G D Q L + AN I + G + +TP R + ++H
Sbjct: 522 VGVIDLSPFGKFNIKGQDSTQLL-DHLCANV-IPKVGFTNISHMLTPRGRVYAELTVSHQ 579
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+++ S + + V VEI++IT + + V GP + +V++ L
Sbjct: 580 -SPGEFLLITGSGSELHDLRWIEEAAVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLT 638
Query: 221 LGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS----Q 274
DL + + + ++ +P+T + E G+ L + +++E +++ +
Sbjct: 639 SEDLSDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDSAALYERIMNAGQEE 698
Query: 275 GAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRLIT 333
G G+ A LR+ K A G E+ + N LEAGL I L+K + G++ + + I
Sbjct: 699 GIDNFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLDYFIKLNKPADFTGKQALKQ-IK 757
Query: 334 YDGLKQRLWGICLSAPAEPGSP-----IIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKD 388
GLK+RL +CL+ + P + GK +G TS + Y+ +
Sbjct: 758 AKGLKRRL--VCLTLATDDVDPEGNESVWYKGKVIGNTTSGSYSYSIQKSLAFAYVPVEL 815
Query: 389 ALGGDTVTV---GDNIVGTVVEVPFL 411
+ G V V G N T+++ P +
Sbjct: 816 SEVGQQVEVELLGKNYPATIIQEPLV 841
>UNIPROTKB|Q63342 [details] [associations]
symbol:Dmgdh "Dimethylglycine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291
RGD:620453 GO:GO:0005739 GO:GO:0050660 GO:GO:0042426 GO:GO:0006579
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0005542 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:X55995
IPI:IPI00207941 PIR:S16133 UniGene:Rn.3646
ProteinModelPortal:Q63342 STRING:Q63342 PhosphoSite:Q63342
PRIDE:Q63342 UCSC:RGD:620453 InParanoid:Q63342
BioCyc:MetaCyc:MONOMER-16117 BRENDA:1.5.99.2 ArrayExpress:Q63342
Genevestigator:Q63342 GermOnline:ENSRNOG00000023588 Uniprot:Q63342
Length = 857
Score = 179 (68.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 79/326 (24%), Positives = 143/326 (43%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHA 160
V +DLS FG+ + G D Q L + AN I + G + +TP R + ++H
Sbjct: 522 VGVIDLSPFGKFNIKGQDSTQLL-DHLCANV-IPKVGFTNISHMLTPRGRVYAELTVSHQ 579
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+++ S + + V VEI++IT + + V GP + +V++ L
Sbjct: 580 -SPGEFLLITGSGSELHDLRWIEEAAVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLT 638
Query: 221 LGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS----Q 274
DL + + + ++ +P+T + E G+ L + +++E +++ +
Sbjct: 639 SEDLSDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDSAALYERIMNAGQEE 698
Query: 275 GAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRLIT 333
G G+ A LR+ K A G E+ + N LEAGL I L+K + G++ + + I
Sbjct: 699 GIDNFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLDYFIKLNKPADFTGKQALKQ-IK 757
Query: 334 YDGLKQRLWGICLSAPAEPGSP-----IIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKD 388
GLK+RL +CL+ + P + GK +G TS + Y+ +
Sbjct: 758 AKGLKRRL--VCLTLATDDVDPEGNESVWYKGKVIGNTTSGSYSYSIQKSLAFAYVPVEL 815
Query: 389 ALGGDTVTV---GDNIVGTVVEVPFL 411
+ G V V G N T+++ P +
Sbjct: 816 SEVGQQVEVELLGKNYPATIIQEPLV 841
>UNIPROTKB|Q9UI17 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0006579 "amino-acid betaine catabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IMP]
[GO:0019695 "choline metabolic process" evidence=NAS] [GO:0005759
"mitochondrial matrix" evidence=NAS] [GO:0047865 "dimethylglycine
dehydrogenase activity" evidence=IMP] [GO:0009055 "electron carrier
activity" evidence=NAS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291 GO:GO:0009055
GO:GO:0050660 GO:GO:0005759 GO:GO:0019695 EMBL:AC020937
GO:GO:0006544 GO:GO:0006579 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005542
eggNOG:COG0665 EMBL:AF111858 EMBL:AK314736 IPI:IPI00296196
RefSeq:NP_037523.2 UniGene:Hs.655653 ProteinModelPortal:Q9UI17
SMR:Q9UI17 STRING:Q9UI17 PhosphoSite:Q9UI17 DMDM:296434575
PaxDb:Q9UI17 PRIDE:Q9UI17 DNASU:29958 Ensembl:ENST00000255189
GeneID:29958 KEGG:hsa:29958 UCSC:uc003kfs.3 CTD:29958
GeneCards:GC05M078293 H-InvDB:HIX0200737 HGNC:HGNC:24475
HPA:HPA036442 MIM:605849 MIM:605850 neXtProt:NX_Q9UI17
Orphanet:243343 PharmGKB:PA134947212 HOGENOM:HOG000251716
HOVERGEN:HBG081945 InParanoid:Q9UI17 KO:K00315 OMA:REVGKMI
OrthoDB:EOG466VK7 PhylomeDB:Q9UI17 GenomeRNAi:29958 NextBio:52675
ArrayExpress:Q9UI17 Bgee:Q9UI17 CleanEx:HS_DMGDH
Genevestigator:Q9UI17 GermOnline:ENSG00000132837 GO:GO:0047865
Uniprot:Q9UI17
Length = 866
Score = 178 (67.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 80/326 (24%), Positives = 146/326 (44%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHA 160
VA DLS FG+ + G D I+ L + AN I + G + +TP R + ++H
Sbjct: 529 VAVTDLSPFGKFNIKGQDSIRLL-DHLFANV-IPKVGFTNISHMLTPKGRVYAELTVSHQ 586
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+++ S + + + V VEI++IT + + V GP++ +V++ L
Sbjct: 587 -SPGEFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVLQKLT 645
Query: 221 LGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS----Q 274
DL + + + V+ +P+T + E G+ L + ++++ +++ +
Sbjct: 646 SEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEE 705
Query: 275 GAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRLIT 333
G G+ A LR+ K A G E+ + N LEAGL + L+K + G++ + + I
Sbjct: 706 GIDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQ-IK 764
Query: 334 YDGLKQRLWGICLSAPAEPGSP-----IIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKD 388
GLK+RL +CL+ + P I +GK VG TS + Y+ +
Sbjct: 765 AKGLKRRL--VCLTLATDDVDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPVQL 822
Query: 389 ALGGDTVTV---GDNIVGTVVEVPFL 411
+ G V V G N +++ P +
Sbjct: 823 SEVGQQVEVELLGKNYPAVIIQEPLV 848
>UNIPROTKB|P49364 [details] [associations]
symbol:GDCST "Aminomethyltransferase, mitochondrial"
species:3888 "Pisum sativum" [GO:0005960 "glycine cleavage complex"
evidence=IDA] InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005960
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 EMBL:X74793 EMBL:Z25861
EMBL:AJ222771 PIR:S38370 PIR:S56661 ProteinModelPortal:P49364
SMR:P49364 IntAct:P49364 PRIDE:P49364 Uniprot:P49364
Length = 408
Score = 172 (65.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 82/331 (24%), Positives = 137/331 (41%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
L+ NG + D+SH + + G D + FL A+ L G G TVF ID
Sbjct: 73 LNCRQNG-SLFDVSHMCGLSLKGKDVVSFLEKLVIADVAALAHGTGTLTVFTNEKGGAID 131
Query: 157 IAHAW-IMKNAVILVVSPLTCSSITEMLNKYV--FFADKVEIQ-DITKQTCLFVVVGPKS 212
+ + + + LVV+ + +++ F A ++ I + L + GP +
Sbjct: 132 DSVITKVTDDHLYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLA 191
Query: 213 NQVMRDLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAG-SVWETL 271
V++ L DL +G R +NG + E+GF + + P+ G + + L
Sbjct: 192 APVLQHLTKEDLSKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISV-PSEHGVELAKAL 250
Query: 272 L--SQGAVPM-GSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDK---GCYKGQ 325
L S+G + + G A + LR+ G G +L +EAGL +I + G + G
Sbjct: 251 LEKSEGKIRLTGLGARDSLRLEAGLCLYGNDLEQHITPIEAGLTWAIGKRRRAEGGFLGA 310
Query: 326 ETISRLITYDGLKQRLWGICLSAPAEPGSPIIVD--GKKVGKLTSYTLGRKESDHFGLGY 383
+ I + + DG R G S P I D G +G++TS + +GY
Sbjct: 311 DVILKQLA-DGPSIRRVGFISSGPPPRSHSEIQDEGGNNIGEVTSGGFSPCLKKNIAIGY 369
Query: 384 IKRKDALGGDTVTV---GDNIVGTVVEVPFL 411
+K G V + G G V ++PF+
Sbjct: 370 VKSGLHKAGTKVKIIIRGKQNEGVVTKMPFV 400
>TAIR|locus:2008900 [details] [associations]
symbol:AT1G11860 species:3702 "Arabidopsis thaliana"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006546 "glycine catabolic process"
evidence=IEA;RCA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0007389 "pattern specification process" evidence=RCA]
[GO:0008361 "regulation of cell size" evidence=RCA] [GO:0009658
"chloroplast organization" evidence=RCA] [GO:0009926 "auxin polar
transport" evidence=RCA] [GO:0010015 "root morphogenesis"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0048481
"ovule development" evidence=RCA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0046686 GO:GO:0009570
GO:GO:0008483 GO:GO:0016020 GO:GO:0048046 GO:GO:0009941
EMBL:AC002131 GO:GO:0009534 GO:GO:0022626 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 EMBL:AY125509 EMBL:BT006361 EMBL:Z26545
IPI:IPI00538278 PIR:H86252 RefSeq:NP_001184969.1 RefSeq:NP_172650.1
RefSeq:NP_849646.1 UniGene:At.47506 ProteinModelPortal:O65396
SMR:O65396 STRING:O65396 SWISS-2DPAGE:O65396 PaxDb:O65396
PRIDE:O65396 ProMEX:O65396 EnsemblPlants:AT1G11860.1
EnsemblPlants:AT1G11860.2 EnsemblPlants:AT1G11860.3 GeneID:837733
KEGG:ath:AT1G11860 GeneFarm:1742 TAIR:At1g11860 eggNOG:COG0404
HOGENOM:HOG000239380 InParanoid:O65396 OMA:KALYGGM PhylomeDB:O65396
ProtClustDB:PLN02319 Genevestigator:O65396 GermOnline:AT1G11860
TIGRFAMs:TIGR00528 Uniprot:O65396
Length = 408
Score = 171 (65.3 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 77/331 (23%), Positives = 137/331 (41%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
++ +NG + D++H + + G D + FL A+ L G G TVF ID
Sbjct: 73 VNCRENG-SLFDVAHMCGLSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAID 131
Query: 157 IAHAWIMKNAVILVVSPLTC--SSITEMLNKYVFFADKV-EIQ-DITKQTCLFVVVGPKS 212
+ + + I +V C + + F K ++ I + L + GP +
Sbjct: 132 DSVITKVTDEHIYLVVNAGCRDKDLAHIEEHMKAFKSKGGDVSWHIHDERSLLALQGPLA 191
Query: 213 NQVMRDLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLL 272
V++ L DL +G + +NG + E+GF + + A + + +L
Sbjct: 192 APVLQHLTKEDLSKLYFGNFQILDINGSTCFLTRTGYTGEDGFEISVPDEHAVDLAKAIL 251
Query: 273 --SQGAVPM-GSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDK---GCYKGQE 326
S+G V + G A + LR+ G G ++ + +EAGL +I + G + G +
Sbjct: 252 EKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHISPVEAGLTWAIGKRRRAEGGFLGAD 311
Query: 327 TISRLITYDGLKQRLWGICLSAPAEPGSPIIVD--GKKVGKLTSYTLGRKESDHFGLGYI 384
I + + DG R G S P + D G K+G++TS + +GY+
Sbjct: 312 VILQQLK-DGPTIRRVGFFSSGPPARSHSEVHDESGNKIGEITSGGFSPNLKKNIAMGYV 370
Query: 385 KRKDALGGDTVTV---GDNIVGTVVEVPFLA 412
K G V + G G++ ++PF+A
Sbjct: 371 KSGQHKTGTKVKILVRGKPYEGSITKMPFVA 401
>TIGR_CMR|SPO_1246 [details] [associations]
symbol:SPO_1246 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006222 Pfam:PF01571
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR KO:K06980
InterPro:IPR017703 TIGRFAMs:TIGR03317 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 OMA:QEVTARM HOGENOM:HOG000009912
RefSeq:YP_166492.1 ProteinModelPortal:Q5LU13 GeneID:3193070
KEGG:sil:SPO1246 PATRIC:23375793 ProtClustDB:CLSK933481
Uniprot:Q5LU13
Length = 244
Score = 155 (59.6 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 43/122 (35%), Positives = 66/122 (54%)
Query: 280 GSNAWEKLRIIKGRPAPGKELTNEFNVLEAGL--WNSISLDKGCYKGQETISRLITYDGL 337
GS+ W+ +R+ P G ELT + +LE+G N + KGCY GQE +R+ L
Sbjct: 126 GSD-WDAIRVAHCIPETGIELTPDSYLLESGFEALNGLDFRKGCYVGQEVTARMKHKTEL 184
Query: 338 KQRLWGICLSAPAEPGSPIIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGDTVTV 397
++ L + + AEPG+ I DGK VG L +T + DH + Y+ R D GG+ ++
Sbjct: 185 RKGLARVAIEGAAEPGTEITADGKPVGVL--HT---RAGDH-AIAYL-RFDRAGGE-MSA 236
Query: 398 GD 399
G+
Sbjct: 237 GE 238
>TIGR_CMR|SPO_3400 [details] [associations]
symbol:SPO_3400 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_168596.1
ProteinModelPortal:Q5LN12 GeneID:3193141 KEGG:sil:SPO3400
PATRIC:23380255 OMA:DPMPEDF Uniprot:Q5LN12
Length = 815
Score = 165 (63.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 56/210 (26%), Positives = 101/210 (48%)
Query: 193 VEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVISE 252
V ++D+T +V GPKS +++ L+ DL + + TH+ +V G P + + E
Sbjct: 582 VTVEDVTTTRDTLIVTGPKSREILAGLSDADL-SQGWLTHQAATVAGQPAFLIRVSFAGE 640
Query: 253 EGFSLLMSPAAAGSVWETLLSQGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLW 312
G+ + ++++ LL GA P G A LR+ KG A +L+ ++++LE GL
Sbjct: 641 LGWEVHALNEHMPAIYDALLGAGAKPFGMWALNSLRLEKGYRAWKGDLSTDYSMLEGGLE 700
Query: 313 NSISLDKGC-YKGQETISRLITYDGLKQRLWGICLSAPAEPGSPIIV----DGKKVGKLT 367
+ LDK + G+ I G+K+ + + A + +P + DG+ VG+ T
Sbjct: 701 RFVKLDKPQDFPGKAAILAE-KQRGVKKSFVTLLVEA-GDCDAPYMSCLWHDGQIVGETT 758
Query: 368 SYTLGRKESDHFGLGYIKRKDALGGDTVTV 397
S G + + LG ++ A+ G + V
Sbjct: 759 SGAWGYRINASVALGMVRADLAVPGTELEV 788
>DICTYBASE|DDB_G0292326 [details] [associations]
symbol:gcvT "aminomethyltransferase" species:44689
"Dictyostelium discoideum" [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008483 "transaminase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
dictyBase:DDB_G0292326 GO:GO:0005739 GO:GO:0008483
GenomeReviews:CM000155_GR EMBL:AAFI02000189 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528
RefSeq:XP_629708.1 HSSP:P48728 ProteinModelPortal:Q54DD3
STRING:Q54DD3 PRIDE:Q54DD3 EnsemblProtists:DDB0231218
GeneID:8628622 KEGG:ddi:DDB_G0292326 ProtClustDB:CLSZ2429438
Uniprot:Q54DD3
Length = 403
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 62/282 (21%), Positives = 118/282 (41%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G++R+ G DR++F + A+ + L G +VF ID +++
Sbjct: 71 DVSHMGQLRIHGKDRVKFFESIVVADLQALPTGHSKLSVFTNEKGGIIDDTMITNAGDSL 130
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTC----LFVVVGPKSNQVMRD-LN 220
+VV+ C+ I+ + K F D++ Q L + GP + +++ +
Sbjct: 131 YVVVNA-GCADKDISHINEKIKEFKSVNPTHDVSMQLLEDLSLIAIQGPTTESILQKFVK 189
Query: 221 LGDLVGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS------- 273
D+ + T R ++ G+ V E+GF + + A + E L+
Sbjct: 190 DQDITNMEFMTQRPMTIAGIDCIVTRCGYTGEDGFEISVPSKQAVRLAELFLATSNASIE 249
Query: 274 QGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-W--NSISLDKGCYKGQETISR 330
G P G A + LR+ G G +L ++ +EA L W + ++G + G I +
Sbjct: 250 SGIKPAGLGARDSLRLEAGLCLYGHDLNDDITPIEASLNWLISKRRREEGGFPGASIIQK 309
Query: 331 LITYDGLKQRLWGICLSAPAEPGSPIIVDGKKVGKLTSYTLG 372
+ DG Q+ G+ ++ +I+D ++ T G
Sbjct: 310 QLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSG 351
Score = 154 (59.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 61/255 (23%), Positives = 113/255 (44%)
Query: 177 SSITEMLNKY--VFFADKVEIQDITKQTCLFVVVGPKSNQVMRD-LNLGDLVGEAYGTHR 233
S I E + ++ V V +Q + + L + GP + +++ + D+ + T R
Sbjct: 144 SHINEKIKEFKSVNPTHDVSMQ-LLEDLSLIAIQGPTTESILQKFVKDQDITNMEFMTQR 202
Query: 234 HYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS-------QGAVPMGSNAWEK 286
++ G+ V E+GF + + A + E L+ G P G A +
Sbjct: 203 PMTIAGIDCIVTRCGYTGEDGFEISVPSKQAVRLAELFLATSNASIESGIKPAGLGARDS 262
Query: 287 LRIIKGRPAPGKELTNEFNVLEAGL-W--NSISLDKGCYKGQETISRLITYDGLKQRLWG 343
LR+ G G +L ++ +EA L W + ++G + G I + + DG Q+ G
Sbjct: 263 LRLEAGLCLYGHDLNDDITPIEASLNWLISKRRREEGGFPGASIIQKQLQKDGCPQKRVG 322
Query: 344 ICLS-APAEPGSPIIVD---GKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGDTVTV-- 397
+ ++ APA G +I+D +++GK+TS T+ + Y+K + G V V
Sbjct: 323 VIINGAPAREGC-LILDPSTNQEIGKVTSGTISPITRQSISMAYVKTPFSKIGTQVNVSI 381
Query: 398 -GDNIVGTVVEVPFL 411
G I T+ ++PF+
Sbjct: 382 RGKPITATISKMPFV 396
>POMBASE|SPAC31G5.14 [details] [associations]
symbol:gcv1 "glycine decarboxylase T subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS;IDA] [GO:0005960 "glycine cleavage
complex" evidence=ISS] [GO:0008483 "transaminase activity"
evidence=ISS] [GO:0019464 "glycine decarboxylation via glycine
cleavage system" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
PomBase:SPAC31G5.14 GO:GO:0005739 GO:GO:0008483 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0004047 InterPro:IPR013977
Pfam:PF08669 GO:GO:0019464 GO:GO:0005960 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
OMA:KALYGGM TIGRFAMs:TIGR00528 EMBL:D84656 PIR:T38631
RefSeq:NP_594015.1 ProteinModelPortal:O14110 STRING:O14110
PRIDE:O14110 EnsemblFungi:SPAC31G5.14.1 GeneID:2543195
KEGG:spo:SPAC31G5.14 OrthoDB:EOG4WT0K6 NextBio:20804218
Uniprot:O14110
Length = 387
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 66/285 (23%), Positives = 120/285 (42%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + V G++ +L + + ++ + L+ + F T ID
Sbjct: 70 DVSHMVQWFVRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDENT 129
Query: 168 ILVVSPLTCSSITEM-LNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL--NLGDL 224
+V+ CS E L K++ VE++ + + L + GP++ V++ L N+ D
Sbjct: 130 YYIVTNAACSEKDEANLKKHIENWKGVELERVQGRA-LIAIQGPETASVVQKLIPNV-DF 187
Query: 225 VGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAV-PMGSNA 283
+G + G+ E+GF + + + TLL+ V P+G A
Sbjct: 188 SVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIPEEVSVDFASTLLADTRVRPIGLGA 247
Query: 284 WEKLRIIKGRPAPGKELTNEFNVLEAGL-W--NSISLDKGCYKGQETISRLITYDGLKQR 340
+ LR+ G G ++ + + +E L W +G + G I + + DG +R
Sbjct: 248 RDTLRLEAGMCLYGSDIDDTTSPVEGSLSWIIGKRRRKEGGFVGSSRILKELK-DGPSRR 306
Query: 341 LWGICLS-APAEPGSPIIVDGKKVGKLTSYTLGRKESDHFGLGYI 384
G + PA GS + VDG +VG++TS + +GYI
Sbjct: 307 RVGFIVEKVPARHGSAVEVDGVEVGQVTSGCPSPTLGKNIAMGYI 351
>TIGR_CMR|GSU_0375 [details] [associations]
symbol:GSU_0375 "glycine cleavage system T protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
OMA:QRYAMFT RefSeq:NP_951434.1 ProteinModelPortal:Q74G72
GeneID:2685714 KEGG:gsu:GSU0375 PATRIC:22023494
ProtClustDB:CLSK924396 BioCyc:GSUL243231:GH27-391-MONOMER
Uniprot:Q74G72
Length = 362
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 73/314 (23%), Positives = 129/314 (41%)
Query: 108 DLSHFGRIRVSGD---DRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI--DIAHAWI 162
D+ H G +GD D ++ + S A+ + R G F+ I D+ +
Sbjct: 50 DICHMGEFLFTGDIIADGLEDVFTFSVASIPVGRSRYG----FLLNGDGGIMDDLIVFRL 105
Query: 163 MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+N ++VV+ T ++ + QDI+ T + GP S +V+ ++
Sbjct: 106 AQNEAMVVVNAATIGKDFAAISARLGGGG---FQDISAATAKLDLQGPLSREVLVEVIGP 162
Query: 223 DLVGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAV-PMGS 281
++ Y V G V E G+ + + +W+ LL+ V P G
Sbjct: 163 EIAAIPYFKFIRTKVLGADAIVSRTGYTGELGYEIFLPSDRVVELWQRLLADPRVRPAGL 222
Query: 282 NAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGCYKGQETISRLITYDGLKQRL 341
A + LR+ G G ++ LEAGL + +S DK + G++ + +G+ +R
Sbjct: 223 GARDVLRLEVGYSLYGSDIDESTTPLEAGLESFVSFDKS-FVGKDALLAQRA-EGVMRRR 280
Query: 342 WGICLSAPAEPGSP--IIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGDTVTVGD 399
+++ P I+ G++VG +TS GLGY+ A+ G +T+
Sbjct: 281 VAFQVASRRSPRHDYEILFQGEQVGAVTSGVFSPMLGCGLGLGYVTPGTAVPGAPLTIRH 340
Query: 400 NIVG---TVVEVPF 410
V TVV+ PF
Sbjct: 341 ERVSMDATVVDAPF 354
>ASPGD|ASPL0000076695 [details] [associations]
symbol:AN8654 species:162425 "Emericella nidulans"
[GO:0004047 "aminomethyltransferase activity" evidence=RCA]
[GO:0006520 "cellular amino acid metabolic process" evidence=RCA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 EMBL:BN001303
EMBL:AACD01000158 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 eggNOG:COG0665 HOGENOM:HOG000251716 RefSeq:XP_681923.1
ProteinModelPortal:Q5ASS6 SMR:Q5ASS6 STRING:Q5ASS6
EnsemblFungi:CADANIAT00006391 GeneID:2868571 KEGG:ani:AN8654.2
OMA:RRSPIHE OrthoDB:EOG4G4KZH Uniprot:Q5ASS6
Length = 948
Score = 159 (61.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 75/330 (22%), Positives = 139/330 (42%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
N VA D+S F R VSG + L T + ++ R G + + + +
Sbjct: 591 NAVAMYDMSSFHRFIVSGPGAVALLQGLGTVDVDV-RPGTIVYALLLNENGGIY--SDVF 647
Query: 162 IMK-NAVILVVSPLTCSSITEMLNKYVFF-----ADKVEIQDITKQTCLFVVVGPKSNQV 215
+ + + + T + + + K + AD V ++D+T TC + GP++ V
Sbjct: 648 VTRLGSFTYQIGANTATDLAYLARKARYQTQKSPADWVHVEDVTGGTCAIGLWGPRAADV 707
Query: 216 MRDLNLG---DLVGEA--YGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWET 270
+ L L D+ ++ Y + ++ +P+T+ + + E G+ + S +WE
Sbjct: 708 LHSLPLPRETDISNKSLPYMRAKAVTIASIPVTLFRKSYVGEYGWEIQTSAEHGARLWEA 767
Query: 271 LLS----QGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDK--GCYKG 324
+ + G + G A+ LRI KG G ++T E + EAGL ++I+ K G K
Sbjct: 768 IFNAGKRHGLIAAGRAAFNALRIEKGYRTYGVDMTTEHDPYEAGLGSAIANLKLEGTSKK 827
Query: 325 QETISRLITYDGLKQRLWGICLSAPAEPGSPIIVDGKKVGKLTSYTLGRKESDHFGLGYI 384
E + + K+ L + G +++ GK+ L+ +G + FG Y
Sbjct: 828 AEFVGKAALRARGKKALTRRLTCLTVDDGMSMVM-GKEPVYLSGNAVGYVTNAAFG--YT 884
Query: 385 KRKDALGGDTVTVGDNIVGTVVEVPFLARQ 414
RK + V G N G VE+ + ++
Sbjct: 885 IRKPVVYA-WVPAGLN-EGVGVEIGYFGKK 912
>TIGR_CMR|SPO_A0311 [details] [associations]
symbol:SPO_A0311 "FAD dependent
oxidoreductase/aminomethyl transferase" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR
HOGENOM:HOG000251716 RefSeq:YP_165138.1 ProteinModelPortal:Q5LKS0
GeneID:3196955 KEGG:sil:SPOA0311 PATRIC:23381968 OMA:KLRCSPL
ProtClustDB:CLSK863205 Uniprot:Q5LKS0
Length = 799
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 78/289 (26%), Positives = 117/289 (40%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART-I 155
+DA NG A +D S FG+I V G D FL+ A +I EG+ T +
Sbjct: 476 VDACRNGAAILDQSAFGKIMVQGPDACTFLNRLCAAQMDIA-EGRIAYTQILNARGGVES 534
Query: 156 DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQ 214
D+ +++V + +M D +VE D+T + G K+ +
Sbjct: 535 DLTVQRHGPETYLMIVG--AGEVVRDMKRMRETRGDFRVEFTDVTSGYAAIGLAGTKARE 592
Query: 215 VMR---DLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETL 271
V++ + + DL + G G + EEG+ L + A + E L
Sbjct: 593 VLQATTNTPVPDLKRFRFAPVEIGLARGW---AGRLSFTGEEGYELYVPSDMAMAAHEAL 649
Query: 272 LSQGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGCYKGQETISRL 331
++ GA G A LRI G A G ELT EAGL + G + GQ ++
Sbjct: 650 VAAGATHAGLFASGSLRIESGFRAFGHELTPGTTPQEAGLGAFCAFGTG-FVGQGALANA 708
Query: 332 ITYDGLKQRLWGICLSAP-AEP--GSPIIVDGKKVGKLTS----YTLGR 373
K+R+ + P A P PI DG+ VG++TS Y GR
Sbjct: 709 ---GSPKRRVVSLLFDDPNAMPIHDEPIYYDGRVVGQITSAAWSYRFGR 754
>TIGR_CMR|SPO_0635 [details] [associations]
symbol:SPO_0635 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_165890.1 ProteinModelPortal:Q5LVR5
GeneID:3195325 KEGG:sil:SPO0635 PATRIC:23374535 OMA:DEYMLYA
Uniprot:Q5LVR5
Length = 835
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 84/330 (25%), Positives = 148/330 (44%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E A NGV +D + F + V G QFL + T N ++ + G+ + + +A T
Sbjct: 491 EEAKAIRNGVGLIDATAFTKHVVKGPGATQFL-DWFTCN-KLPKVGR-INLTYALTSAGT 547
Query: 155 IDIAHAWIM--KNAVILVVSPLTCSSITEMLNKYVFFADK------VEIQDITKQTCLFV 206
+ + +N +V + + L K DK +EIQD+T Q +F
Sbjct: 548 TRTEYTIVRNGENNYYIVSAGAWTEYDADFLRKAA--EDKMEEFGYIEIQDVTTQWGVFA 605
Query: 207 VVGPKSNQVMRDLNLGDLVGEAYGTHRHYS-VNGMPITVGVG--NVI-----SEEGFSLL 258
+ GPKS V++++ + D E +++ + ++ I +G+ N I E G+ L
Sbjct: 606 IAGPKSRDVLKEV-IKDADPETALSNKRFPWLSARQIELGMCPVNAIRVAYTGELGWELH 664
Query: 259 MSPAAAGSVWETLLSQGAVP----MGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNS 314
+W+ LL+ G +G+ A LR K A G EL + LEA L
Sbjct: 665 HPIEMQRYLWDLLLAAGEKHGMKLVGARAQNWLRQEKSYRAFGTELGRDATPLEADLPRF 724
Query: 315 ISLDKGCYKGQETISRLITYDGLKQRLWGICLSAP--AEP-GSPIIV--DGKKVGKLTS- 368
+ L K + E ++ G++ + + + P A+P G + +G +VG+LTS
Sbjct: 725 VDLGKDFHGKAEMEAK-----GIRSKCCTLLIDGPSDADPWGREALYTPEGARVGRLTSG 779
Query: 369 -YTLGRKESDHFGLGYIKRKDALGGDTVTV 397
Y++ ++S G+GY+K + A+ G + V
Sbjct: 780 GYSVAFEKS--IGMGYVKPELAVEGTKLKV 807
>TIGR_CMR|SPO_A0063 [details] [associations]
symbol:SPO_A0063 "FAD dependent
oxidoreductase/aminomethyl transferase" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0004047 "aminomethyltransferase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
[GO:0016491 "oxidoreductase activity" evidence=ISS] [GO:0050660
"flavin adenine dinucleotide binding" evidence=ISS]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:CP000032
GenomeReviews:CP000032_GR HOGENOM:HOG000251716 KO:K00315
ProtClustDB:CLSK863205 RefSeq:YP_164894.1 ProteinModelPortal:Q5LLG4
GeneID:3196774 KEGG:sil:SPOA0063 PATRIC:23381430 OMA:PVASMEH
Uniprot:Q5LLG4
Length = 811
Score = 144 (55.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 56/239 (23%), Positives = 111/239 (46%)
Query: 181 EMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYG--THRHYSVN 238
+ L++++ + V+++ +T + V+ GP++ V+ GD EA+ + R +
Sbjct: 561 DWLSQHIQPGEDVQLRSLTNDQTILVLAGPRARAVLSACARGDWSREAFPWLSVRECFIG 620
Query: 239 GMPITV-GVGNVISEEGFSLLMSPAAAGSVWETLL----SQGAVPMGSNAWEKLRIIKGR 293
P TV GV + E + + + A+ + + L + G G+ A E +R+ KG
Sbjct: 621 FAPATVMGV-SFSGELAYEIHIPNASLYAAYLALRKAGEAHGLTLFGARAVESMRMEKGF 679
Query: 294 PAPGKELTNEFNVLEAGLWNSISLDKGCYKGQETISRLITYDGLKQRLWGICLS---APA 350
+L EF+ E GL + LDKG + G+ + + DG ++ L + ++ APA
Sbjct: 680 LHWKADLITEFDPFETGLSRFVKLDKGAFIGKPALLDRQS-DGPRKMLVTLQIATDRAPA 738
Query: 351 EPGSPIIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGDTVTV---GDNIVGTVV 406
G+ ++V + VG +TS G + + ++ + A G + + GD + V+
Sbjct: 739 RGGASLMVGQRVVGTVTSGDWGHRVGMNLAYAFVDPELAEPGSEMMLDLCGDMVAARVI 797
Score = 52 (23.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 88 ETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
E F + A N V +++ F RI ++G R FL
Sbjct: 463 EAFDVVAAEVKAVQNSVGLAEVNGFNRIEITGSGRHAFL 501
>UNIPROTKB|O53825 [details] [associations]
symbol:MT0832 "Conserved protein" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR006222
Pfam:PF01571 GO:GO:0005886 GO:GO:0005737 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842574 KO:K06980 InterPro:IPR017703 TIGRFAMs:TIGR03317
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
EMBL:AL123456 PIR:C70809 RefSeq:NP_215326.1 RefSeq:NP_335260.1
RefSeq:YP_006514160.1 DNASU:885401
EnsemblBacteria:EBMYCT00000001220 EnsemblBacteria:EBMYCT00000072104
GeneID:13318707 GeneID:885401 GeneID:926135 KEGG:mtc:MT0832
KEGG:mtu:Rv0811c KEGG:mtv:RVBD_0811c PATRIC:18123568
TubercuList:Rv0811c HOGENOM:HOG000248903 OMA:TIPHELG
ProtClustDB:CLSK871856 Uniprot:O53825
Length = 368
Score = 145 (56.1 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 92/351 (26%), Positives = 144/351 (41%)
Query: 85 GIVETFGND-GEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
G + +G+ GE A VD SH + + G DR +LH+ ST + L EG
Sbjct: 14 GAIWHYGDPLGEQR-AGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPEGAST 72
Query: 144 DTVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+ + R D H WI + L P + L K VF++ +
Sbjct: 73 QNLSLDGQGRVED--H-WIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWS---MVTPRAA 126
Query: 201 QTCLFVVVGPK--SNQVMRDLNLGDLVGE--AYGTHRHYSVNGMPITVGVGNVISEEGFS 256
+ ++GP+ +V+ L L L E A V MP G+ I +
Sbjct: 127 DMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPD--GLAGQIELD--- 181
Query: 257 LLMSPAAAGSVWETLLSQGAV-PMGSNAWEKLRIIKGRPAPGKEL---TNEFNVL-EAGL 311
++ + W+ L+Q V P G A+E R+ PA L T+E + E G
Sbjct: 182 -VVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVG- 239
Query: 312 W------NSISLDKGCYKGQETISRLITYDGLKQRLWGICLSAPAE-P--GSPIIVDGKK 362
W ++ L+KGCY+GQET++R+ + L + L + P G ++ G+
Sbjct: 240 WIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRT 299
Query: 363 VGKLTSYTLGRKESDHFGLGYIKRKDALGGDT--VTVGDNIVGTVVEVPFL 411
VG+L + + E L +KR L GDT VT + V V++V L
Sbjct: 300 VGRLGT-VVEHVELGPVALALLKR--GLPGDTALVTGPEAEVAAVIDVDSL 347
>TIGR_CMR|CPS_3841 [details] [associations]
symbol:CPS_3841 "glycine cleavage system T protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
RefSeq:YP_270503.1 ProteinModelPortal:Q47XG7 STRING:Q47XG7
GeneID:3518894 KEGG:cps:CPS_3841 PATRIC:21470589 OMA:QRYAMFT
ProtClustDB:CLSK910129 BioCyc:CPSY167879:GI48-3858-MONOMER
Uniprot:Q47XG7
Length = 375
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 64/294 (21%), Positives = 127/294 (43%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G++++ G + L + L +G+ +F +D + +
Sbjct: 55 DVSHMGQLKLVGKNAAAALETLVPVDIIDLPQGKQRYALFTNDQGGLLDDLMVSNFGDHL 114
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGE 227
+VV+ + + K++ AD VEI+ I + L + GPK+ +V++ L L +
Sbjct: 115 FVVVNAACKAQDIAHMQKHLP-AD-VEIE-ILEGRALLALQGPKAGEVLKRL-LPESADM 170
Query: 228 AYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAVP-MGSNAWEK 286
+ R G +G E+GF + + A + +L++ + +G A +
Sbjct: 171 VFMDSRVVDFAGAQCIIGRAGYTGEDGFEISIPGEHAERITRLMLAEEEIEWIGLGARDS 230
Query: 287 LRIIKGRPAPGKELTNEFNVLEAGLWNSISLDK-------GCYKGQETI-SRLITYDGLK 338
LR+ G G ++ +EA L +IS + G + G + I ++ T D +
Sbjct: 231 LRLESGLCLYGHDIDQTTTPVEASLLWAISKIRRTDGARAGGFPGADIILDQIATKDVAR 290
Query: 339 QRLWGICLS-APAEPGSPII-VDGKKVGKLTSYTLGRKESDHFGLGYIKRKDAL 390
+R+ + L AP G + G ++G +TS T G + +GY++ + A+
Sbjct: 291 KRIGMVGLGKAPVREGIKLFNAQGDEIGVVTSGTAGPTKGSPIAMGYVQTQYAV 344
>ZFIN|ZDB-GENE-080227-8 [details] [associations]
symbol:dmgdh "dimethylglycine dehydrogenase"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 ZFIN:ZDB-GENE-080227-8
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 EMBL:BC155630 IPI:IPI00511660
UniGene:Dr.5571 ProteinModelPortal:A9JRE6 STRING:A9JRE6
Uniprot:A9JRE6
Length = 875
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 77/323 (23%), Positives = 136/323 (42%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHAWI 162
V +DLS FG+++V+G D + L ++ AN + + GQ + +TP R ++
Sbjct: 540 VGVIDLSPFGKMKVTGADSERLL-DRLLAN-TLPKVGQTNISHMLTPRGRVYAELTVTHT 597
Query: 163 MKNAVILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+L+ S + + + V + ++T + + + GPK+ +++ L
Sbjct: 598 QPGEFLLITGSGSELHDLRWIEREAADGGYDVCVTNVTDEIGVLGIAGPKARTILQKLTS 657
Query: 222 GDLV--GEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAVP- 278
DL G + R + G + + E G+ L M +V++ L+ G
Sbjct: 658 ADLSESGFRFLQCRTIELAGATVQAIRISYTGELGWELYMDMRNMSAVYQALMEAGRDEN 717
Query: 279 ---MGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGC-YKGQETISRLITY 334
G+ A LR+ KG A G E+ + N LEAGL I L+K + G++ + I
Sbjct: 718 IDDFGTYAMNSLRLEKGFRAWGAEMNCDTNPLEAGLDYFIKLNKPADFIGKQALLE-IKA 776
Query: 335 DGLKQRLWGICLSAP-AEP-GSPIIV-DGKKVGKLTSYTLGRKESDHFGLGYIKRKDALG 391
GL +RL + L+ +P G+ + +G+ VG TS + Y+
Sbjct: 777 QGLSRRLAFLTLNTDDIDPEGNESVWHNGEVVGNTTSGSYSYSTHQSVAFAYLPVGLTQL 836
Query: 392 GDTVTV---GDNIVGTVVEVPFL 411
G V V G TV + P +
Sbjct: 837 GQKVEVELLGQKYSATVTKEPLI 859
>UNIPROTKB|P28337 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9031 "Gallus gallus" [GO:0006546 "glycine catabolic
process" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 CTD:275 HOVERGEN:HBG005822
EMBL:D11162 IPI:IPI00578487 PIR:A44167 RefSeq:NP_990119.1
UniGene:Gga.1002 ProteinModelPortal:P28337 SMR:P28337 PRIDE:P28337
GeneID:395566 KEGG:gga:395566 BioCyc:MetaCyc:MONOMER-12927
NextBio:20815640 Uniprot:P28337
Length = 392
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 75/303 (24%), Positives = 122/303 (40%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + RV G DR++FL + + LR GQG T+ DI I+ N
Sbjct: 69 DVSHMLQTRVYGRDRVRFLESLVVGDIAELRPGQGTLTLLTNERG---DIVDDLIVTNTA 125
Query: 168 ---ILVVSPLTCS----SITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+ VVS C+ ++ E + A +++ Q V GP QV++
Sbjct: 126 EDHLYVVSNAGCADKDRAVMEGRAAELRAAGGDVHLEVSGQRAAGVQ-GPSMAQVLQAGL 184
Query: 221 LGDLVGEAYGTHRHYSVNGMP-ITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAV-P 278
DL + T +V G+P V E+G + + A + E LL V P
Sbjct: 185 PDDLTKLTFMTSTATTVFGVPGCRVTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWP 244
Query: 279 MGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-WNSISLDKGC--YKGQETISRLITYD 335
G A + LR+ G G ++ +EAGL W + + G I +
Sbjct: 245 AGLAARDSLRLEAGLCLYGNDIDESTTPVEAGLLWTLGKRRRTAMDFPGAAIIMEQVKEK 304
Query: 336 GLKQRLWGICLSAPAEPGSPII-VDGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGDT 394
++R+ + P P + I+ +G VG +TS + +GY++ + G T
Sbjct: 305 PKRKRVGLTSVGPPLRPPAAILGPEGTPVGTVTSGCPSPSLGKNIAMGYVQAAHSRPGTT 364
Query: 395 VTV 397
+TV
Sbjct: 365 LTV 367
>WB|WBGene00021355 [details] [associations]
symbol:Y37E3.17 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
GeneTree:ENSGT00530000063120 EMBL:FO081769 GeneID:171775
KEGG:cel:CELE_Y37E3.17 CTD:171775 RefSeq:NP_001021746.1
ProteinModelPortal:Q6AW03 SMR:Q6AW03 STRING:Q6AW03 PaxDb:Q6AW03
PRIDE:Q6AW03 EnsemblMetazoa:Y37E3.17b UCSC:Y37E3.17b
WormBase:Y37E3.17b HOGENOM:HOG000022206 InParanoid:Q6AW03
OMA:IWGKELT NextBio:872635 ArrayExpress:Q6AW03 Uniprot:Q6AW03
Length = 837
Score = 142 (55.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 82/337 (24%), Positives = 142/337 (42%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID---IA 158
N +DLS G+I V G+D + L + + A+ +I G+ + +T + I
Sbjct: 502 NKCGVIDLSWKGKIEVKGNDA-EKLMDYAIAS-QIPALGKISSGLMLTRHGGILGPMMIF 559
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK---VEIQDITKQTCLFVVVGPKSNQV 215
H ++A IL+ P S L + A+K V++ +++ +VGPKS +V
Sbjct: 560 HHDRQRSAFILLTEPERESRDLYWLRRAA--AEKKFDVQVSIVSEYLASLALVGPKSREV 617
Query: 216 MRDLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVISEEG---FSLLMSPAAAGSVWETLL 272
+ L D+ E + + P+ V + G + L + A ++ ++
Sbjct: 618 LSALTKSDVSDEGFPQKSTRMIRLGPVGVVCARSSTSTGQLSYELFHNRAETAKLYNAVM 677
Query: 273 S----QGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGCYKGQETI 328
S G V G A +R+ G GKELT + N E G+ + +K + G+E+
Sbjct: 678 SAGREHGIVNFGQAALNMMRLEHGYKIWGKELTLDTNPFECGIGGLVDFEKKEFIGRESA 737
Query: 329 SRLITYDGLKQRLW--------GICLSAPAEP-GSPII-VDGK--KVGKLTSYTLGRKES 376
L D +RL G L P G+ +I +DGK +VG++TS +
Sbjct: 738 LELKKKD-FDRRLALITFDTEEGCVLDDRYVPSGNEVIRIDGKEARVGQITSGAYNVRLQ 796
Query: 377 DHFGLGYIKRKDALGGD---TVTVGDN-IVGTVVEVP 409
+I +A+G + V +GD + T +E P
Sbjct: 797 KPIAFAWID--NAVGKNERLVVDIGDKRLFATSLETP 831
>MGI|MGI:3646700 [details] [associations]
symbol:Amt "aminomethyltransferase" species:10090 "Mus
musculus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006546 "glycine catabolic
process" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008483 "transaminase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 MGI:MGI:3646700 GO:GO:0005739
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528 CTD:275
GeneTree:ENSGT00510000047333 HOVERGEN:HBG005822 OrthoDB:EOG45MN5K
EMBL:AJ437692 IPI:IPI00229274 RefSeq:NP_001013836.1
UniGene:Mm.390225 ProteinModelPortal:Q8CFA2 SMR:Q8CFA2
STRING:Q8CFA2 PhosphoSite:Q8CFA2 PaxDb:Q8CFA2 PRIDE:Q8CFA2
Ensembl:ENSMUST00000035230 GeneID:434437 KEGG:mmu:434437
InParanoid:Q8CFA2 NextBio:409655 Bgee:Q8CFA2 CleanEx:MM_AMT
Genevestigator:Q8CFA2 GermOnline:ENSMUSG00000032607 Uniprot:Q8CFA2
Length = 403
Score = 136 (52.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 68/304 (22%), Positives = 125/304 (41%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + ++ G DR++ L + + LR QG ++F +D
Sbjct: 80 DVSHMLQTKIFGCDRVKLLESVVVGDIAELRPNQGTLSLFTNEAGGILDDLIVSNTSEGH 139
Query: 168 ILVVSPLTC--SSITEMLNKYVFFADK-VEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ VVS C + M +K F ++ +++ + L + GP + QV++ D+
Sbjct: 140 LYVVSNAGCRDKDLALMQDKVKEFQNRGLDVGLEVVENALLALQGPTATQVLQAGVTDDM 199
Query: 225 VGEAYGTH---RHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAVPM-G 280
+ T + V+G +T G E+G + + A + TLL V + G
Sbjct: 200 KKLPFMTSAVMEVFGVSGCRVT-RCGYT-GEDGVEISVPATGAVHLATTLLKNPEVKLAG 257
Query: 281 SNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-WN-----SISLDKGCYKGQETISRLITY 334
A + LR+ G G ++ +E L W I++D + G + I +
Sbjct: 258 LAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRIAMD---FPGAKIIVPQLKG 314
Query: 335 DGLKQRLWGICLSAPAEPGSPII-VDGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGD 393
+ ++R+ IC AP SPI+ +G +G +TS + +GY+ K + G
Sbjct: 315 EVQRRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCPSPSLKKNVAMGYVPFKYSRPGT 374
Query: 394 TVTV 397
+ V
Sbjct: 375 QLLV 378
>UNIPROTKB|Q8EIH8 [details] [associations]
symbol:ygfZ "Folate-dependent protein involved in synthesis
and repair of FeS clusters YgfZ" species:211586 "Shewanella
oneidensis MR-1" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006222 Pfam:PF01571
GO:GO:0005737 EMBL:AE014299 GenomeReviews:AE014299_GR KO:K06980
InterPro:IPR017703 TIGRFAMs:TIGR03317 GO:GO:0004047 GO:GO:0006546
HOGENOM:HOG000261300 OMA:NKRALYI RefSeq:NP_716492.1
ProteinModelPortal:Q8EIH8 GeneID:1168708 KEGG:son:SO_0861
PATRIC:23521383 ProtClustDB:CLSK905978 Uniprot:Q8EIH8
Length = 318
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/131 (26%), Positives = 64/131 (48%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
LDA+ + +LSH G I+V+G+ F+H Q TA+ L Q P + +
Sbjct: 12 LDASMPPLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLA 71
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ +K+A++L++ T L KY F+ K + + +++ CL V G ++NQ +
Sbjct: 72 SFRTFTIKDALLLLMPKDTIEVDLPQLQKYAVFS-KATLSNASEEWCLLGVAGEQANQFV 130
Query: 217 RDLNLGDLVGE 227
+ G++ E
Sbjct: 131 TQ-HFGEVAQE 140
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVIS 251
K + + +++ CL V G ++NQ + + G++ E T H G ++
Sbjct: 106 KATLSNASEEWCLLGVAGEQANQFVTQ-HFGEVAQELTLTE-H------------GAILK 151
Query: 252 E-EGFSLLMSPAAAGSVWETLLSQGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAG 310
+ + F L++ P AA + L+++ V ++AW+ L I G P N++
Sbjct: 152 DADRFILVLQPQAASA----LIAEHTV-FDASAWQALEIAAGYPNLAPSHANQYVPQMCN 206
Query: 311 LW--NSISLDKGCYKGQETISRLITYDGLKQRLW 342
L N IS +KGCY GQET++R+ G K+ L+
Sbjct: 207 LQAINGISFNKGCYMGQETVARMKYRGGNKRALY 240
>TIGR_CMR|SO_0861 [details] [associations]
symbol:SO_0861 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR KO:K06980 InterPro:IPR017703
TIGRFAMs:TIGR03317 GO:GO:0004047 GO:GO:0006546 HOGENOM:HOG000261300
OMA:NKRALYI RefSeq:NP_716492.1 ProteinModelPortal:Q8EIH8
GeneID:1168708 KEGG:son:SO_0861 PATRIC:23521383
ProtClustDB:CLSK905978 Uniprot:Q8EIH8
Length = 318
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/131 (26%), Positives = 64/131 (48%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
LDA+ + +LSH G I+V+G+ F+H Q TA+ L Q P + +
Sbjct: 12 LDASMPPLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLA 71
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ +K+A++L++ T L KY F+ K + + +++ CL V G ++NQ +
Sbjct: 72 SFRTFTIKDALLLLMPKDTIEVDLPQLQKYAVFS-KATLSNASEEWCLLGVAGEQANQFV 130
Query: 217 RDLNLGDLVGE 227
+ G++ E
Sbjct: 131 TQ-HFGEVAQE 140
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVIS 251
K + + +++ CL V G ++NQ + + G++ E T H G ++
Sbjct: 106 KATLSNASEEWCLLGVAGEQANQFVTQ-HFGEVAQELTLTE-H------------GAILK 151
Query: 252 E-EGFSLLMSPAAAGSVWETLLSQGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAG 310
+ + F L++ P AA + L+++ V ++AW+ L I G P N++
Sbjct: 152 DADRFILVLQPQAASA----LIAEHTV-FDASAWQALEIAAGYPNLAPSHANQYVPQMCN 206
Query: 311 LW--NSISLDKGCYKGQETISRLITYDGLKQRLW 342
L N IS +KGCY GQET++R+ G K+ L+
Sbjct: 207 LQAINGISFNKGCYMGQETVARMKYRGGNKRALY 240
>TIGR_CMR|SPO_1648 [details] [associations]
symbol:SPO_1648 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000253737 KO:K00605
PANTHER:PTHR13847:SF5 RefSeq:YP_166889.1 ProteinModelPortal:Q5LSW6
GeneID:3193889 KEGG:sil:SPO1648 PATRIC:23376621 OMA:GKYVPLC
ProtClustDB:CLSK2767249 Uniprot:Q5LSW6
Length = 367
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 58/234 (24%), Positives = 101/234 (43%)
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEA-YGTHRHYSVNGMPITVGVGNVI 250
KVE+ + V GPK+ V+ + GD V + Y R ++G+P+ V
Sbjct: 140 KVEVSE--PDVSPLAVQGPKAETVVASI-FGDWVRDLKYFWFRETEIDGIPVAVARSGWS 196
Query: 251 SEEGFSLLMSPAAAGS-VWETLLSQG---AVPMGSNAWEKLRIIKGRPAPGKELTNEFNV 306
+ GF + + G+ +W + G + G+ W + R+ G + G + + N
Sbjct: 197 KQGGFEIYLMDGTKGTALWNIVKEAGQPQGIGPGNPNWCE-RVESGLVSYGGDSDGQTNP 255
Query: 307 LEAGLWNSISLD-KGCYKGQETISRLITYDGLKQRLWGICL--SAP--AE-PGSPIIVDG 360
E + + LD G E + R I +G K+ G+ L S P AE + I +DG
Sbjct: 256 FEVRMGKYVDLDLPDDTIGIEALRR-IAAEGPKRHQLGVVLDNSEPVKAEFTWNDIDMDG 314
Query: 361 KKVGKLTSYTLGRKESDHFGLGYIKRKDALGGDTVTV---GDNIVGTVVEVPFL 411
++G +T+ + + + G + A GD V V + GT+ ++PFL
Sbjct: 315 MRIGDMTTCVWSYRMNKNIGFALVATS-ARPGDRVVVRRAAGAVEGTLCDLPFL 367
>WB|WBGene00017765 [details] [associations]
symbol:gcst-1 species:6239 "Caenorhabditis elegans"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528
GeneTree:ENSGT00510000047333 EMBL:FO080538 PIR:T25732
RefSeq:NP_504502.1 ProteinModelPortal:Q22968 SMR:Q22968
STRING:Q22968 PaxDb:Q22968 EnsemblMetazoa:F25B4.1.1
EnsemblMetazoa:F25B4.1.2 GeneID:178960 KEGG:cel:CELE_F25B4.1
UCSC:F25B4.1.1 CTD:178960 WormBase:F25B4.1 InParanoid:Q22968
NextBio:903294 Uniprot:Q22968
Length = 402
Score = 134 (52.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 84/364 (23%), Positives = 153/364 (42%)
Query: 70 LLETVKSEGAKI---SGEGIVETFGNDG--EALDAADNGVAAVDLSHFGRIRVSGDDRIQ 124
L+ET K G K+ +G + + + E+ V+ D+SH + ++G DR+
Sbjct: 30 LIETHKKHGGKLVEFAGYDMPTQYADFSIKESTIHTRKHVSLFDVSHMLQTYITGKDRVA 89
Query: 125 FLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA--VILVVSPLTC--SSIT 180
F+ + +TA+ + L+E G +VF D IMK + +V+ C +
Sbjct: 90 FIESLTTADVQGLQENSGTLSVFTNEKGGIKD--DLIIMKTDKDFLFLVTNAGCIEKDLP 147
Query: 181 EMLNKYVFFADK---VEIQDITKQTCLFVVVGPKSNQVMR---DLNLGDLVGEAYGTHRH 234
+ + K V+I+ + + L V GP+ +V++ D++L L +
Sbjct: 148 YLQENAAAWRSKGKDVKIETLDNRG-LVAVQGPEMAKVLQEGTDIDLSKLTFMKTTVGKV 206
Query: 235 YSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLL-SQ-GAVPM-GSNAWEKLRIIK 291
+ ++G +T G E+G + + P A + E LL SQ G+V + G A + LR+
Sbjct: 207 FGIDGCRVT-RCGYT-GEDGVEISVDPTKAEQLVERLLASQAGSVKLAGLGARDALRLEA 264
Query: 292 GRPAPGKELTNEFNVLEAGLWNSISLDKG---CYKGQETISRLITYDGLKQRLWGICLSA 348
G G ++ +EAGL ++ + + G E I + + +R G+ A
Sbjct: 265 GLCLYGSDIEENTTPIEAGLAFVVAKRRRETLDFPGAEHIVKQLKEKSWPKRRVGLLAPA 324
Query: 349 PAEPGS--PII--VDGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGDTVTVGDNIVGT 404
P S P+I +D +G +TS + + Y+ + + G V
Sbjct: 325 GRCPRSHLPLIDPLDKCSIGFVTSGCPSPTLGKNIAIAYVDKSHSKIGTKFVVDFGAKQA 384
Query: 405 VVEV 408
VEV
Sbjct: 385 PVEV 388
>UNIPROTKB|B4E1J9 [details] [associations]
symbol:DMGDH "cDNA FLJ50354, highly similar to
Dimethylglycine dehydrogenase, mitochondrial (EC 1.5.99.2)"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737 EMBL:AC020937
EMBL:AC008502 GO:GO:0004047 GO:GO:0006546 EMBL:AC016559
UniGene:Hs.655653 HGNC:HGNC:24475 EMBL:AK303873 IPI:IPI01013014
SMR:B4E1J9 STRING:B4E1J9 Ensembl:ENST00000540686 UCSC:uc011ctg.1
Uniprot:B4E1J9
Length = 394
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 56/225 (24%), Positives = 104/225 (46%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHA 160
VA DLS FG+ + G D I+ L + AN I + G + +TP R + ++H
Sbjct: 149 VAVTDLSPFGKFNIKGQDSIRLL-DHLFANV-IPKVGFTNISHMLTPKGRVYAELTVSHQ 206
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+++ S + + + V VEI++IT + + V GP++ +V++ L
Sbjct: 207 -SPGEFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVLQKLT 265
Query: 221 LGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS----Q 274
DL + + + V+ +P+T + E G+ L + ++++ +++ +
Sbjct: 266 SEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEE 325
Query: 275 GAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDK 319
G G+ A LR+ K A G E+ + N LEAGL + L+K
Sbjct: 326 GIDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNK 370
>WB|WBGene00013718 [details] [associations]
symbol:Y106G6H.5 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
EMBL:AL032631 HOGENOM:HOG000251716 GeneTree:ENSGT00530000063120
OMA:DWFDIVG RefSeq:NP_492730.2 ProteinModelPortal:Q9U300 SMR:Q9U300
STRING:Q9U300 PaxDb:Q9U300 EnsemblMetazoa:Y106G6H.5.1
EnsemblMetazoa:Y106G6H.5.2 GeneID:172922 KEGG:cel:CELE_Y106G6H.5
UCSC:Y106G6H.5.1 CTD:172922 WormBase:Y106G6H.5 InParanoid:Q9U300
NextBio:877543 Uniprot:Q9U300
Length = 855
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 73/341 (21%), Positives = 139/341 (40%)
Query: 72 ETVKSE-GAKISGE----GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
+T K+E A +SG+ G E F +A V +D+S F + ++G+D +++L
Sbjct: 473 KTPKTERNALMSGQDALIGKPEWFERVASEYEACRERVGLMDMSSFSKYDITGEDAVEYL 532
Query: 127 HNQSTANFEILREGQGCDTVFVTPTAR----TIDIAHAWIMKNAVILVVSPLTCSSITEM 182
+AN + E G TV+ + D + + + +V + +
Sbjct: 533 QFLCSANVD---EPIGT-TVYTGMQHQKGGYVTDCTLSRLGEKKFFMVAPTIQQERVLVW 588
Query: 183 LNKY-VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSVN-GM 240
+ K+ +V +QD+T ++GP S +M D+ + + T R +N GM
Sbjct: 589 MKKWQAILKARVHVQDVTGAYTALDLIGPSSRYLMGDITGLSMSSNDFPTFRCQEINIGM 648
Query: 241 PITVGVGNVI--SEEGFSLLMSPAAAGSVWETLLSQGAV----PMGSNAWEKLRIIKGRP 294
+ +V E G+ + + A +V+E +L G G +LRI K
Sbjct: 649 ATGIRAISVTHCGELGWVIYVPNEVAQNVYEKILDAGKEYSLQHAGYYTLRQLRIEKFYV 708
Query: 295 APGKELTNEFNVLEAGLWNSISLDKGCYKGQETISRLITYDGLKQRLWGICLSA---PAE 351
G+++ +E G + K + G++ + + G+ +R + + +
Sbjct: 709 YWGQDINATVTPVECGRLFRVDFKKD-FIGKKALEEQVER-GVSKRFVQLLVDGHDKETD 766
Query: 352 P----GSPIIVDGKKVGKLTSYTLGRKESDHFGLGYIKRKD 388
P G I+ DG+ VG TS G +GY++ K+
Sbjct: 767 PWPQGGETILKDGRAVGLTTSAAYGFTLGCQVCIGYVENKE 807
>RGD|1359408 [details] [associations]
symbol:Amt "aminomethyltransferase" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 RGD:1359408 GO:GO:0005737 GO:GO:0008483
EMBL:CH473954 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528
CTD:275 HOVERGEN:HBG005822 EMBL:BC083803 IPI:IPI00358872
RefSeq:NP_001014026.1 UniGene:Rn.162376 SMR:Q5XI85 GeneID:306586
KEGG:rno:306586 NextBio:656268 Genevestigator:Q5XI85 Uniprot:Q5XI85
Length = 403
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 67/304 (22%), Positives = 124/304 (40%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + ++ G DR++ + N + LR QG ++F +D
Sbjct: 80 DVSHMLQTKIFGCDRVRLMENIVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGH 139
Query: 168 ILVVSPLTC--SSITEMLNKYVFFADK-VEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ VVS C + M +K F ++ +++ L + GP + QV++ D+
Sbjct: 140 LYVVSNAGCRDKDLALMQDKVKEFQNRGLDVGLEVVDNALLALQGPTAAQVLQAGVTDDM 199
Query: 225 VGEAYGTH---RHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAVPM-G 280
+ T + V+G +T G E+G + + A A + LL V + G
Sbjct: 200 RKLPFMTSAVMEVFGVSGCRVT-RCGYT-GEDGVEISVPAAGAVHLATALLKNPEVKLAG 257
Query: 281 SNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-WN-----SISLDKGCYKGQETISRLITY 334
A + LR+ G G ++ +E L W +++D + G + I +
Sbjct: 258 LAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRVAMD---FPGAKIIIPQLKG 314
Query: 335 DGLKQRLWGICLSAPAEPGSPII-VDGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGD 393
+ ++R+ IC AP SPI+ +G +G +TS + +GY+ K + G
Sbjct: 315 EVQRRRVGLICEGAPMRAHSPILNTEGAVIGTVTSGCPSPSLKKNVAMGYVAFKYSRPGT 374
Query: 394 TVTV 397
+ V
Sbjct: 375 QLLV 378
>SGD|S000002426 [details] [associations]
symbol:GCV1 "T subunit of the mitochondrial glycine
decarboxylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0006544 "glycine
metabolic process" evidence=IMP] [GO:0004375 "glycine dehydrogenase
(decarboxylating) activity" evidence=ISS;IMP] [GO:0006730
"one-carbon metabolic process" evidence=IGI;IMP] [GO:0006546
"glycine catabolic process" evidence=IEA;IC] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005960 "glycine cleavage complex" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 SGD:S000002426 GO:GO:0005739 GO:GO:0008483
EMBL:BK006938 GO:GO:0006730 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:X95966 EMBL:Z49770
GO:GO:0005960 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
GeneTree:ENSGT00510000047333 OMA:KPAFWGR OrthoDB:EOG4WT0K6
EMBL:L41522 EMBL:Z74315 PIR:S54642 RefSeq:NP_010302.1
ProteinModelPortal:P48015 SMR:P48015 IntAct:P48015 STRING:P48015
PaxDb:P48015 PeptideAtlas:P48015 EnsemblFungi:YDR019C GeneID:851582
KEGG:sce:YDR019C CYGD:YDR019c NextBio:969049 Genevestigator:P48015
GermOnline:YDR019C Uniprot:P48015
Length = 400
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 53/216 (24%), Positives = 91/216 (42%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKN 165
D+SH + ++SG ++FL + +F L G G +V + P +D I N
Sbjct: 64 DVSHMLQSKLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDN 123
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQ-DITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+V + TE + + ++ Q I + L + GPK+ V+ L
Sbjct: 124 EFYIVTNAGCAERDTEFFHDELQNGSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTA 183
Query: 225 VG----EAYGTHRH-YSV-NGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAV- 277
G E + RH +++ +G + + G E+GF + ++ A E LL+ +
Sbjct: 184 PGKDLKELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMK 243
Query: 278 PMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-W 312
P+G A + LR+ G G EL +EA L W
Sbjct: 244 PIGLAARDSLRLEAGMCLYGHELDESITPVEAALNW 279
>UNIPROTKB|F8W6P8 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 EMBL:AC020937 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 EMBL:AC016559 HGNC:HGNC:24475 IPI:IPI00178676
ProteinModelPortal:F8W6P8 PRIDE:F8W6P8 Ensembl:ENST00000380311
UCSC:uc011ctf.1 ArrayExpress:F8W6P8 Bgee:F8W6P8 Uniprot:F8W6P8
Length = 573
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 56/225 (24%), Positives = 104/225 (46%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHA 160
VA DLS FG+ + G D I+ L + AN I + G + +TP R + ++H
Sbjct: 328 VAVTDLSPFGKFNIKGQDSIRLL-DHLFANV-IPKVGFTNISHMLTPKGRVYAELTVSHQ 385
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+++ S + + + V VEI++IT + + V GP++ +V++ L
Sbjct: 386 -SPGEFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVLQKLT 444
Query: 221 LGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS----Q 274
DL + + + V+ +P+T + E G+ L + ++++ +++ +
Sbjct: 445 SEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEE 504
Query: 275 GAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDK 319
G G+ A LR+ K A G E+ + N LEAGL + L+K
Sbjct: 505 GIDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNK 549
>TIGR_CMR|CPS_4132 [details] [associations]
symbol:CPS_4132 "putative aminomethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008152
"metabolic process" evidence=ISS] [GO:0008168 "methyltransferase
activity" evidence=ISS] HAMAP:MF_01175 InterPro:IPR006222
InterPro:IPR023758 Pfam:PF01571 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0008033 eggNOG:COG0354 KO:K06980
InterPro:IPR017703 TIGRFAMs:TIGR03317 GO:GO:0004047 GO:GO:0006546
GO:GO:0005542 GO:GO:0009451 RefSeq:YP_270787.1 HSSP:P0ADE8
ProteinModelPortal:Q47WN5 STRING:Q47WN5 GeneID:3519346
KEGG:cps:CPS_4132 PATRIC:21471127 HOGENOM:HOG000261300 OMA:NKRALYI
BioCyc:CPSY167879:GI48-4145-MONOMER Uniprot:Q47WN5
Length = 324
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 61/265 (23%), Positives = 114/265 (43%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
++LS FG I +SG+++ ++L Q T + + E + + I +++
Sbjct: 21 IELSEFGAISLSGEEQSKYLQGQVTCDVNSITESNLLVGAHCDAKGKVFSVFRL-INRSS 79
Query: 167 VILVVSPLTC--SSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
L++ P S+ E L K+ FA KV I DI ++ ++G +++ +++ +
Sbjct: 80 AHLLLQPTASIEGSLKE-LKKFGVFA-KVTI-DIAEELGFIALIGKQASSLIQQ-EFSQV 135
Query: 225 VGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAVPMGSNA- 283
+ + G + + ++ A ++ E L A+P S +
Sbjct: 136 PDSLTPV---VQIGSTSLVYLSGE---QPRYIIIDDKATITAITEKL----ALPTYSQSV 185
Query: 284 WEKLRIIKGRPAPGKELTNEF--NVLEAGLWNSISLDKGCYKGQETISRLITYDGLKQRL 341
W L I +G P + + +L N IS KGCY GQET++R+ Y G +R
Sbjct: 186 WNLLEITQGFPILTANTSGHYVPQMLNLQAINGISFTKGCYLGQETVARM-QYLGKNKRA 244
Query: 342 WGICLSAPAE-PGSPIIVDGKKVGK 365
CL++ E P V K++G+
Sbjct: 245 L-FCLNSQLEQPFQSDDVIEKQLGE 268
>UNIPROTKB|Q8TCC6 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 EMBL:AC020937 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 EMBL:AC016559 UniGene:Hs.655653 HGNC:HGNC:24475
HOGENOM:HOG000251716 EMBL:BC022388 IPI:IPI00985114 SMR:Q8TCC6
STRING:Q8TCC6 Ensembl:ENST00000523732 HOVERGEN:HBG103457
Uniprot:Q8TCC6
Length = 613
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 56/225 (24%), Positives = 104/225 (46%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHA 160
VA DLS FG+ + G D I+ L + AN I + G + +TP R + ++H
Sbjct: 368 VAVTDLSPFGKFNIKGQDSIRLL-DHLFANV-IPKVGFTNISHMLTPKGRVYAELTVSHQ 425
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+++ S + + + V VEI++IT + + V GP++ +V++ L
Sbjct: 426 -SPGEFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVLQKLT 484
Query: 221 LGDLVGEAYG--THRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS----Q 274
DL + + + V+ +P+T + E G+ L + ++++ +++ +
Sbjct: 485 SEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEE 544
Query: 275 GAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDK 319
G G+ A LR+ K A G E+ + N LEAGL + L+K
Sbjct: 545 GIDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNK 589
>TIGR_CMR|SPO_A0057 [details] [associations]
symbol:SPO_A0057 "glycine cleavage system T protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR KO:K00605
PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
OMA:QRYAMFT RefSeq:YP_164888.1 ProteinModelPortal:Q5LLH0
GeneID:3196668 KEGG:sil:SPOA0057 PATRIC:23381418 Uniprot:Q5LLH0
Length = 365
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 76/327 (23%), Positives = 132/327 (40%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A D+SH G++ + GDD L F L EG+ F +D I+
Sbjct: 49 ALFDVSHMGQVILRGDDIGAKLEKLCPQVFLTLPEGKARYGFFTNAEGGIMDDL---IVS 105
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM-------R 217
NA + + + + D VE+ +I + L V GP + V+ R
Sbjct: 106 NAGEYFFVVVNAALRHQDIPHLAAHLDGVEVTEIFDRA-LVAVQGPSAEDVVGRLCPAAR 164
Query: 218 DLNLGD-LVGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLS-QG 275
DL + ++GE ++G+ + E+G+ + + A + L+ +
Sbjct: 165 DLKFMETMLGE---------IDGVDCRISRLGYTGEDGYEISIPEGEAIRISRLFLAHED 215
Query: 276 AVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-W--NSISLDKGCYKGQETISRLI 332
P G A + LR+ G G ++ N + +EA L W ++G + G I + I
Sbjct: 216 CEPAGLGARDSLRLEAGLCLYGNDIDNGTSPIEASLLWAIQKRRREEGGFPGAGRILKEI 275
Query: 333 TYDGLKQRLWGICLS--APAEPGSPI-IVDGKKVGKLTSYTLGRKESDHFGLGYIKRKDA 389
+G ++L GI APA I + G+ +G++TS G +GY+ A
Sbjct: 276 A-EGAPRKLVGIKPEGRAPARQHVEIQSLGGETIGEITSGGFGPTVGAPVAMGYVASAHA 334
Query: 390 LGGDTVTV---GDNIVGTVVEVPFLAR 413
G+ V + G +V +PF+A+
Sbjct: 335 APGEKVNLIIRGKAQPAEIVALPFVAQ 361
>FB|FBgn0032287 [details] [associations]
symbol:CG6415 species:7227 "Drosophila melanogaster"
[GO:0004047 "aminomethyltransferase activity" evidence=ISS]
[GO:0005960 "glycine cleavage complex" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] [GO:0005811 "lipid
particle" evidence=IDA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0008483 GO:GO:0005811
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
PANTHER:PTHR13847:SF5 eggNOG:COG0404 TIGRFAMs:TIGR00528
EMBL:BT021235 ProteinModelPortal:Q5BII9 STRING:Q5BII9 PaxDb:Q5BII9
PRIDE:Q5BII9 UCSC:CG6415-RA FlyBase:FBgn0032287 InParanoid:Q5BII9
OrthoDB:EOG4H44K8 ArrayExpress:Q5BII9 Bgee:Q5BII9 Uniprot:Q5BII9
Length = 409
Score = 126 (49.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + R+ G D L + TA+ EG G TVF +D +
Sbjct: 77 DVSHMLQSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKE 136
Query: 168 ILVVSPLTCSS-----ITEMLNKYVFFADKVEIQDITK-QTCLFVVVGPKSNQVMRDLNL 221
+ VVS + ++ + V I+ +T L V GP QV ++L+
Sbjct: 137 LYVVSNAAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGP---QVAKELSK 193
Query: 222 GDLVGEAYGTHRHYSVNGMPITVGVGNV-------ISEEGFSLLMSPAAAGSVWETLLSQ 274
L G+A ++ + + G+ NV E+G + ++ + A + E+LL
Sbjct: 194 L-LTGKASLDQLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLES 252
Query: 275 GAVPM-GSNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-WNSISLDKGC--YKGQETISR 330
G + + G A + LR+ G G ++ ++ +EA L W + + G + I
Sbjct: 253 GVLKLAGLGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADVILG 312
Query: 331 LITYDGLKQRLWGICLSA----PAEPGSPIIVDGKKVGKLTSYTLGRKESDHFGLGYI 384
+ +G+ +R G+ + PA G I G++VG++TS + +GY+
Sbjct: 313 QLK-EGVSRRRVGLQMLGTKPPPARSGVAIFSQGQQVGQVTSGCPSPSAGRNIAMGYV 369
>UNIPROTKB|D4A8Z7 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
IPI:IPI00781340 Ensembl:ENSRNOT00000061188 ArrayExpress:D4A8Z7
Uniprot:D4A8Z7
Length = 509
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY--GTHRHYSVNGMPITVGVGNV 249
+ ++ D ++ + + GP S +++D+ DL EA+ TH+ G + +
Sbjct: 261 RCQLMDCSEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSF 320
Query: 250 ISEEGFSLLMSPAAAGSVWETLLSQGA----VPMGSNAWEKLRIIKGRPAPGKELTNEFN 305
+ E G+ L + A+ V+ +++ GA V G A + L I KG +L ++ +
Sbjct: 321 VGELGWELHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLSIEKGYRHWHADLRSDDS 380
Query: 306 VLEAGLWNSISLDKGC-YKGQETISRLITYDGLKQRLWGICLSAPAE-P--GSPIIV-DG 360
LEAGL + L + G+E + + GL++RL +CL+ E P G I +G
Sbjct: 381 PLEAGLAFTCKLKTSVPFLGREALEKQRA-TGLRRRL--VCLTVEEEVPMFGLEAIWRNG 437
Query: 361 KKVGKLTSYTLGRKESDHFGLGYIKRKDALGG----DTVTVGD 399
+ VG + G + GYI+ D GG D V GD
Sbjct: 438 QVVGHVRRADFGFTVNKTIAYGYIR--DPSGGPVSLDFVKNGD 478
>TIGR_CMR|SPO_0207 [details] [associations]
symbol:SPO_0207 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_165477.1
ProteinModelPortal:Q5LWZ7 GeneID:3195798 KEGG:sil:SPO0207
PATRIC:23373663 OMA:WHAAANI Uniprot:Q5LWZ7
Length = 805
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 68/307 (22%), Positives = 125/307 (40%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHAWI 162
V +D+S+F + G +L ++ AN EG+ C T + D
Sbjct: 478 VGVIDISNFANYEIKGPGAHDWL-DRLVANRVPTVEGRSCLTPLIGVRGGIAGDFTITMT 536
Query: 163 MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
++A ++V S + N V + + T + + V GP++ ++++ L
Sbjct: 537 GEDAYMMVGSGMAERYHQRFFNM-VDLPEGTTCEVATNRIAGYNVAGPRAREMLQRLTNA 595
Query: 223 DLVGEAYGTHRHYSVN--GMP-ITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQ----G 275
DL + R ++ G+ + + V + + G L + ++ L++ G
Sbjct: 596 DLSNAGFPFMRSATIEVAGVACLAIRV-SFTGDLGCELHCAEGDQVRLYTALIAAAREVG 654
Query: 276 AVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLDKGCYKGQETISRLITYD 335
P+GS A LRI KG + G+E + E+ E GL I DK + + ++ Y
Sbjct: 655 GGPVGSRALGSLRIEKGYGSWGREYSPEYWPQEVGLDRLIKADKD-FLNKAAWLKIKDYP 713
Query: 336 GLKQRLWGICLSA----PAEPGSPIIV-DGKKVGKLTSYTLGRKESDHFGLGYIKRKDAL 390
+++ L + A A G PI DG+ G++TS G +G++ A
Sbjct: 714 -VREVLSVFEIEAVHGADASGGEPIFTPDGRPAGRVTSGAYGYSVGKSLAIGFVNPAVAQ 772
Query: 391 GGDTVTV 397
GD + V
Sbjct: 773 PGDVLEV 779
>TIGR_CMR|CPS_1274 [details] [associations]
symbol:CPS_1274 "glycine cleavage system T protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 HSSP:P27248 RefSeq:YP_268017.1
ProteinModelPortal:Q486J8 SMR:Q486J8 STRING:Q486J8 GeneID:3522650
KEGG:cps:CPS_1274 PATRIC:21465783 OMA:WSIAWEP
BioCyc:CPSY167879:GI48-1355-MONOMER Uniprot:Q486J8
Length = 362
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 66/314 (21%), Positives = 122/314 (38%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANF-EILREGQGCDTVFV 148
+G+ E A D+SH + V G D FL + ++ G+ T +
Sbjct: 30 YGSQIEEHHAVRTDAGMFDVSHMTIVDVQGADAKAFLRRLVINDVAKLATPGKALYTGML 89
Query: 149 TPTARTIDIAHAWIMKNAVI-LVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVV 207
ID + + LVV+ T + K D + I + + + V
Sbjct: 90 NEEGGVIDDLIIYFFSDTDYRLVVNSATRVKDLAWMTKQSTGFD-ITITE-RPEFGMLAV 147
Query: 208 VGPKSNQVMRDLNLGDLVGEAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSV 267
GP++ + L + + G + V + + E+G+ +++ +A
Sbjct: 148 QGPEAKAKVAKLLTAEQIEAVEGMKPFFGVQVGDLFIATTGYTGEDGYEIIVPNNSAEDF 207
Query: 268 WETLLSQGAVPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSIS---LDKGCYKG 324
W+ LL +G VP G A + LR+ G G ++ + L A + +IS D+ + G
Sbjct: 208 WQKLLDEGVVPCGLGARDTLRLEAGMNLYGLDMDETVSPLAANMAWTISWEPTDRD-FIG 266
Query: 325 QETISRLITYDGLKQRLWGICLSAPAEPGS-PIIVDGKKVGKLTSYTLGRKESDHFGLGY 383
++ ++ G + +L G+ L A S ++V G++TS T L
Sbjct: 267 RDVLTAQKAA-GDQPKLVGLVLEAKGVLRSHQVVVTEFGNGEITSGTFSPTLGHSVALAR 325
Query: 384 IKRKDALGGDTVTV 397
+ R +G DT+ V
Sbjct: 326 VPRSVKVG-DTIEV 338
>ZFIN|ZDB-GENE-040426-996 [details] [associations]
symbol:sardh "sarcosine dehydrogenase" species:7955
"Danio rerio" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
ZFIN:ZDB-GENE-040426-996 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 EMBL:AL935290 EMBL:BX323065
EMBL:BX537125 EMBL:CU524648 IPI:IPI00481475
Ensembl:ENSDART00000080904 Ensembl:ENSDART00000131043
Uniprot:F1Q4Q8
Length = 924
Score = 116 (45.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 197 DITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY--GTHRHYSVNGMPITVGVGNVISEEG 254
D T+ + + GPKS ++++++ +L EA+ THR S G + + + E G
Sbjct: 672 DHTEDMGMISIQGPKSRELLQEVLDSELSNEAFPFSTHRIVSAAGHQVRAMRLSFVGEMG 731
Query: 255 FSLLMSPAAAGSVWETLLSQGA----VPMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAG 310
+ L + + V+ +++ GA G A + L I KG +L + LEAG
Sbjct: 732 WELHIPKESCLPVYNAVMAAGAKYGICNAGYRAIDSLSIEKGYRHWHADLRPDDTPLEAG 791
Query: 311 LWNSISLDKGC-YKGQETISRLITYDGLKQRLWGICLSAPAE-P--G-SPIIVDGKKVGK 365
L + L + G+ + +GL++R+ +C + + P G I +G VG
Sbjct: 792 LAFTCKLKTSIPFMGRTALEAQKA-EGLRRRI--VCFTVDEKVPMFGLEAIFRNGVPVGH 848
Query: 366 LTSYTLGRKESDHFGLGYIKRKDA--LGGDTVTVGD 399
L G G GYI+ D + D V GD
Sbjct: 849 LRRSEFGFAIDKTIGYGYIRNPDGGVVSPDFVRSGD 884
Score = 55 (24.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 102 NGVAAVDLSHFGRIRVSGDD 121
N VA D+S+FG+ +SG D
Sbjct: 563 NAVAVFDMSYFGKFYLSGPD 582
>RGD|621125 [details] [associations]
symbol:Sardh "sarcosine dehydrogenase" species:10116 "Rattus
norvegicus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;ISS] [GO:0005759 "mitochondrial
matrix" evidence=IDA] [GO:0006545 "glycine biosynthetic process"
evidence=TAS] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0008480 "sarcosine dehydrogenase activity" evidence=TAS]
[GO:0016491 "oxidoreductase activity" evidence=IEA;NAS] [GO:0042426
"choline catabolic process" evidence=NAS;TAS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IDA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
EMBL:AF067650 RGD:621125 GO:GO:0050660 GO:GO:0005759 GO:GO:0042426
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 GO:GO:0006545 HOGENOM:HOG000251716 CTD:1757
HOVERGEN:HBG002326 KO:K00314 OrthoDB:EOG4XKV66 GO:GO:0008480
EMBL:U62481 EMBL:L79910 IPI:IPI00209807 RefSeq:NP_446116.1
UniGene:Rn.89832 ProteinModelPortal:Q64380 STRING:Q64380
PRIDE:Q64380 GeneID:114123 KEGG:rno:114123 UCSC:RGD:621125
InParanoid:Q64380 BioCyc:MetaCyc:MONOMER-16116 NextBio:618353
ArrayExpress:Q64380 Genevestigator:Q64380
GermOnline:ENSRNOG00000006916 Uniprot:Q64380
Length = 919
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY--GTHRHYSVNGMPITVGVGNV 249
+ ++ D ++ + + GP S +++D+ DL EA+ TH+ G + +
Sbjct: 671 RCQLMDCSEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSF 730
Query: 250 ISEEGFSLLMSPAAAGSVWETLLSQGA----VPMGSNAWEKLRIIKGRPAPGKELTNEFN 305
+ E G+ L + A+ V+ +++ GA V G A + L I KG +L ++ +
Sbjct: 731 VGELGWELHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLSIEKGYRHWHADLRSDDS 790
Query: 306 VLEAGLWNSISLDKGC-YKGQETISRLITYDGLKQRLWGICLSAPAE-P--GSPIIV-DG 360
LEAGL + L + G+E + + GL++RL +CL+ E P G I +G
Sbjct: 791 PLEAGLAFTCKLKTSVPFLGREALEKQRA-TGLRRRL--VCLTVEEEVPMFGLEAIWRNG 847
Query: 361 KKVGKLTSYTLGRKESDHFGLGYIKRKDALGG----DTVTVGD 399
+ VG + G + GYI+ D GG D V GD
Sbjct: 848 QVVGHVRRADFGFTVNKTIAYGYIR--DPSGGPVSLDFVKNGD 888
>UNIPROTKB|Q64380 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
EMBL:AF067650 RGD:621125 GO:GO:0050660 GO:GO:0005759 GO:GO:0042426
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 GO:GO:0006545 HOGENOM:HOG000251716 CTD:1757
HOVERGEN:HBG002326 KO:K00314 OrthoDB:EOG4XKV66 GO:GO:0008480
EMBL:U62481 EMBL:L79910 IPI:IPI00209807 RefSeq:NP_446116.1
UniGene:Rn.89832 ProteinModelPortal:Q64380 STRING:Q64380
PRIDE:Q64380 GeneID:114123 KEGG:rno:114123 UCSC:RGD:621125
InParanoid:Q64380 BioCyc:MetaCyc:MONOMER-16116 NextBio:618353
ArrayExpress:Q64380 Genevestigator:Q64380
GermOnline:ENSRNOG00000006916 Uniprot:Q64380
Length = 919
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY--GTHRHYSVNGMPITVGVGNV 249
+ ++ D ++ + + GP S +++D+ DL EA+ TH+ G + +
Sbjct: 671 RCQLMDCSEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSF 730
Query: 250 ISEEGFSLLMSPAAAGSVWETLLSQGA----VPMGSNAWEKLRIIKGRPAPGKELTNEFN 305
+ E G+ L + A+ V+ +++ GA V G A + L I KG +L ++ +
Sbjct: 731 VGELGWELHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLSIEKGYRHWHADLRSDDS 790
Query: 306 VLEAGLWNSISLDKGC-YKGQETISRLITYDGLKQRLWGICLSAPAE-P--GSPIIV-DG 360
LEAGL + L + G+E + + GL++RL +CL+ E P G I +G
Sbjct: 791 PLEAGLAFTCKLKTSVPFLGREALEKQRA-TGLRRRL--VCLTVEEEVPMFGLEAIWRNG 847
Query: 361 KKVGKLTSYTLGRKESDHFGLGYIKRKDALGG----DTVTVGD 399
+ VG + G + GYI+ D GG D V GD
Sbjct: 848 QVVGHVRRADFGFTVNKTIAYGYIR--DPSGGPVSLDFVKNGD 888
>UNIPROTKB|D4A9I9 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 IPI:IPI00557713
ProteinModelPortal:D4A9I9 Ensembl:ENSRNOT00000043905
ArrayExpress:D4A9I9 Uniprot:D4A9I9
Length = 920
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY--GTHRHYSVNGMPITVGVGNV 249
+ ++ D ++ + + GP S +++D+ DL EA+ TH+ G + +
Sbjct: 672 RCQLMDCSEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSF 731
Query: 250 ISEEGFSLLMSPAAAGSVWETLLSQGA----VPMGSNAWEKLRIIKGRPAPGKELTNEFN 305
+ E G+ L + A+ V+ +++ GA V G A + L I KG +L ++ +
Sbjct: 732 VGELGWELHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLSIEKGYRHWHADLRSDDS 791
Query: 306 VLEAGLWNSISLDKGC-YKGQETISRLITYDGLKQRLWGICLSAPAE-P--GSPIIV-DG 360
LEAGL + L + G+E + + GL++RL +CL+ E P G I +G
Sbjct: 792 PLEAGLAFTCKLKTSVPFLGREALEKQRA-TGLRRRL--VCLTVEEEVPMFGLEAIWRNG 848
Query: 361 KKVGKLTSYTLGRKESDHFGLGYIKRKDALGG----DTVTVGD 399
+ VG + G + GYI+ D GG D V GD
Sbjct: 849 QVVGHVRRADFGFTVNKTIAYGYIR--DPSGGPVSLDFVKNGD 889
>TIGR_CMR|CBU_1716 [details] [associations]
symbol:CBU_1716 "glycine cleavage system T protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 RefSeq:NP_820697.2
ProteinModelPortal:Q83B06 SMR:Q83B06 PRIDE:Q83B06 GeneID:1209627
KEGG:cbu:CBU_1716 PATRIC:17932163
BioCyc:CBUR227377:GJ7S-1688-MONOMER Uniprot:Q83B06
Length = 363
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 75/324 (23%), Positives = 131/324 (40%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILRE-GQGCDTVFVTPTARTIDIAHAW-IMKN 165
D+SH G I + G++ FL + L + G+ T + P ID + +
Sbjct: 48 DVSHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPT 107
Query: 166 AVILVVSPLTCSS-ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
LVV+ T I + K + KV I + + C+ V GP++ + + L
Sbjct: 108 GYRLVVNAATRDKDIAWIKEKGAGY--KVSISE-RPEMCILAVQGPQAIAAAKSIFDEAL 164
Query: 225 VG--EAYGTHRHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAVPMGSN 282
EA S + + E+G +++ + A +W + QG P G
Sbjct: 165 YAQLEALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLG 224
Query: 283 AWEKLRIIKGRPAPGKELTNEFNVLEAGL-----WNSISLDKGCYKGQETISRLITYDGL 337
A + LR+ G G ++ + L + L WN D+ + G+ + + + + +
Sbjct: 225 ARDTLRLEAGLNLYGTDMDETTSPLISNLSWTVSWNDA--DRN-FIGRRALEKQLD-ENV 280
Query: 338 KQRLWGICLSAPAEPGSPIIVDGKKVGKLTSYTLGRKESDHFG--LGY---IKRKDALGG 392
K+RL G+ + EPG I+ + +KV LT G S F LG+ + R
Sbjct: 281 KERLIGLVME---EPG--ILRNHQKVW-LTEDGEGIITSGGFSPTLGHAIALARVPVGEV 334
Query: 393 DTVTV---GDNIVGTVVEVPFLAR 413
+ TV G I +++ PF+ R
Sbjct: 335 EKATVERRGKKIPVKIIKPPFVRR 358
>UNIPROTKB|H0Y695 [details] [associations]
symbol:AMT "Aminomethyltransferase" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0008483 "transaminase
activity" evidence=IEA] [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 HGNC:HGNC:473
ChiTaRS:AMT ProteinModelPortal:H0Y695 Ensembl:ENST00000427987
Uniprot:H0Y695
Length = 384
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 65/293 (22%), Positives = 116/293 (39%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + ++ G DR++ + + + LR QG ++F +D
Sbjct: 78 DVSHMLQTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGH 137
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKV-EIQ----DITKQT---CLFVVVGPKSNQVMRDL 219
+ VVS C DKV E+Q D+ + L + GP + QV++
Sbjct: 138 LYVVSNAGCWE-----KDLALMQDKVRELQNQGRDVGLEVLDNALLALQGPTAAQVLQAG 192
Query: 220 NLGDLVGEAYGTH---RHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGA 276
DL + T + V+G +T G E+G + + A A + +L
Sbjct: 193 VADDLRKLPFMTSAVMEVFGVSGCRVT-RCGYT-GEDGVEISVPVAGAVHLATAILKNPE 250
Query: 277 VPM-GSNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-WNSISLDKGC--YKGQETISRLI 332
V + G A + LR+ G G ++ +E L W + + G + I +
Sbjct: 251 VKLAGLAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGAKVIVPQL 310
Query: 333 TYDGLKQRLWGICLSAPAEPGSPII-VDGKKVGKLTSYTLGRKESDHFGLGYI 384
++R+ +C AP SPI+ ++G K+G +TS + +GY+
Sbjct: 311 KGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCPSPSLKKNVAMGYV 363
>UNIPROTKB|P48728 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9606 "Homo sapiens" [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0008483 "transaminase activity" evidence=IEA]
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739
GO:GO:0008483 DrugBank:DB00157 EMBL:CH471055 DrugBank:DB00116
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 MIM:605899
Orphanet:407 eggNOG:COG0404 HOGENOM:HOG000239380 OMA:KALYGGM
TIGRFAMs:TIGR00528 CTD:275 HOVERGEN:HBG005822 EMBL:D13811
EMBL:D14686 EMBL:AK290600 EMBL:AK293481 EMBL:AK296177 EMBL:BC007546
IPI:IPI00299300 IPI:IPI00793058 IPI:IPI00910686 IPI:IPI00925396
PIR:I54192 RefSeq:NP_000472.2 RefSeq:NP_001158182.1
RefSeq:NP_001158183.1 UniGene:Hs.102 PDB:1WSR PDB:1WSV PDBsum:1WSR
PDBsum:1WSV ProteinModelPortal:P48728 SMR:P48728 STRING:P48728
PhosphoSite:P48728 DMDM:1346122 PaxDb:P48728 PRIDE:P48728
Ensembl:ENST00000273588 Ensembl:ENST00000395338
Ensembl:ENST00000458307 Ensembl:ENST00000538581 GeneID:275
KEGG:hsa:275 UCSC:uc003cww.3 GeneCards:GC03M049429 HGNC:HGNC:473
HPA:HPA005566 MIM:238310 neXtProt:NX_P48728 PharmGKB:PA24780
InParanoid:P48728 PhylomeDB:P48728 SABIO-RK:P48728 ChiTaRS:AMT
EvolutionaryTrace:P48728 GenomeRNAi:275 NextBio:1109
ArrayExpress:P48728 Bgee:P48728 CleanEx:HS_AMT
Genevestigator:P48728 GermOnline:ENSG00000145020 Uniprot:P48728
Length = 403
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 65/293 (22%), Positives = 116/293 (39%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + ++ G DR++ + + + LR QG ++F +D
Sbjct: 80 DVSHMLQTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGH 139
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKV-EIQ----DITKQT---CLFVVVGPKSNQVMRDL 219
+ VVS C DKV E+Q D+ + L + GP + QV++
Sbjct: 140 LYVVSNAGCWE-----KDLALMQDKVRELQNQGRDVGLEVLDNALLALQGPTAAQVLQAG 194
Query: 220 NLGDLVGEAYGTH---RHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGA 276
DL + T + V+G +T G E+G + + A A + +L
Sbjct: 195 VADDLRKLPFMTSAVMEVFGVSGCRVT-RCGYT-GEDGVEISVPVAGAVHLATAILKNPE 252
Query: 277 VPM-GSNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-WNSISLDKGC--YKGQETISRLI 332
V + G A + LR+ G G ++ +E L W + + G + I +
Sbjct: 253 VKLAGLAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGAKVIVPQL 312
Query: 333 TYDGLKQRLWGICLSAPAEPGSPII-VDGKKVGKLTSYTLGRKESDHFGLGYI 384
++R+ +C AP SPI+ ++G K+G +TS + +GY+
Sbjct: 313 KGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCPSPSLKKNVAMGYV 365
>ZFIN|ZDB-GENE-041010-114 [details] [associations]
symbol:amt "aminomethyltransferase" species:7955
"Danio rerio" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
ZFIN:ZDB-GENE-041010-114 GO:GO:0005737 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 CTD:275 HOVERGEN:HBG005822
EMBL:BC083400 EMBL:DQ104411 IPI:IPI00483251 RefSeq:NP_001006021.1
UniGene:Dr.78748 SMR:Q5XJA4 STRING:Q5XJA4 GeneID:450000
KEGG:dre:450000 InParanoid:Q5XJA4 NextBio:20832983 Uniprot:Q5XJA4
Length = 409
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 69/321 (21%), Positives = 133/321 (41%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + +V G DR++F+ + + L++ QG ++F +D
Sbjct: 87 DVSHMLQTKVYGKDRVKFIESLIVGDIAELKDNQGTLSLFTNSKGGIMDDLIVTKTDQDY 146
Query: 168 ILVVSPLTCSS-----ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+ VVS C+ + L ++ V+++ + + L + GP +V++ +G
Sbjct: 147 LYVVSNAGCADKDSAHMQARLQEFKSAGHDVDLEFMEES--LIALQGPSMARVLQK-GVG 203
Query: 223 D-LVGEAYGTH---RHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAVP 278
D L + T + + G +T G E+G + + + E LL+ V
Sbjct: 204 DDLKKLTFMTSVLTPVFGIQGCRVT-RCGYT-GEDGVEISVPSKDVVLLTEKLLADSEVK 261
Query: 279 M-GSNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-WNSISLDKGC--YKGQETISRLITY 334
+ G A + LR+ G G ++ +EA L W + + G + I I
Sbjct: 262 LAGLGARDSLRLEAGLCLYGNDIDETTTPVEATLVWTIGKRRRQARDFPGADIIVPQIKA 321
Query: 335 DGLKQRLWGICLSAPAEPGSPIIV-DGKKVGKLTSYTLGRKESDHFGLGYIKRKDALGGD 393
++R+ I P +PI+ DG+ +G++TS + +GY++ + G
Sbjct: 322 KTPRKRVGLISTGPPVRQHTPILSSDGRVIGEVTSGCPSPCLKQNVAMGYVETAFSKAGT 381
Query: 394 T--VTVGDNIVGTVV-EVPFL 411
+ V V V VV ++PF+
Sbjct: 382 SIQVEVRKKAVPAVVSKMPFV 402
>UNIPROTKB|F1NG59 [details] [associations]
symbol:PDPR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005739 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 OMA:DWFDIVG EMBL:AADN02051588
EMBL:AADN02051589 IPI:IPI00581586 ProteinModelPortal:F1NG59
Ensembl:ENSGALT00000004241 Uniprot:F1NG59
Length = 887
Score = 121 (47.7 bits), Expect = 0.00060, P = 0.00060
Identities = 76/332 (22%), Positives = 138/332 (41%)
Query: 94 GEALDAADNGVAAVDLSHFGRIRVS--GDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
G + V +D+S F + +S GD +Q L + + ++ G T +
Sbjct: 519 GSEVKCCKEAVCVIDMSSFTKFEISSTGDQALQSLQYLFSNDLDV-PVGHVVHTGMLNEN 577
Query: 152 AR-TIDIAHAWIMKNAVILVVSPLTCSSIT--EMLNKYVFFADKVEIQDIT-KQTCLFVV 207
D + A + K + ++ SP T + L ++ + I+D+T K T L ++
Sbjct: 578 GGYENDCSIARLSKRSFFMI-SP-TDQQVHCWAWLKNHLPEDSNLTIEDVTWKYTALNLI 635
Query: 208 VGPKSNQVMRDLNLGDLVGEAYGTH--RHYSV---NGMPITVGVGNVISEEGFSLLMSPA 262
GP++ V+ +L+ + E + + + SV NG+ + + + + E GF L +
Sbjct: 636 -GPRAVDVLSELSYAPMTPEHFPSFFCKEMSVGYANGIRV-MSITHT-GEPGFMLYIPIE 692
Query: 263 AAGSVWETLLSQGAV----PMGSNAWEKLRIIKGRPAPGKELTNEFNVLEAGLWNSISLD 318
A V+ +++ G G A LRI K G++L +E G + L+
Sbjct: 693 YALHVYNEVMNMGQKYGIRNAGYYALRSLRIEKFFAFWGQDLDAFTTPMECGREFQVKLE 752
Query: 319 KGC-YKGQETISRLITYDGLKQRLWGICLS-----APAEP--GSPIIVDGKKVGKLTSYT 370
KG + GQE + +G+ +R L P G PI +G+ VGK TS
Sbjct: 753 KGMDFIGQEALLEQ-KQNGVYKRFTMFILEDHDTDMDLWPWWGEPIFRNGRYVGKTTSSA 811
Query: 371 LGRKESDHFGLGYIKRKDALGGDTVTVGDNIV 402
H LG+++ D G+ + V + +
Sbjct: 812 YSYTLERHVCLGFVQHFDEKTGEELVVTTDFI 843
>UNIPROTKB|P25285 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion"
evidence=IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=TAS] [GO:0031405 "lipoic acid binding" evidence=IDA]
[GO:0006546 "glycine catabolic process" evidence=TAS] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0008483
"transaminase activity" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0008483
GO:GO:0005743 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 GO:GO:0031405
eggNOG:COG0404 HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528
EMBL:M59799 IPI:IPI00700367 PIR:A23707 RefSeq:NP_803451.1
UniGene:Bt.7177 ProteinModelPortal:P25285 SMR:P25285 STRING:P25285
PRIDE:P25285 Ensembl:ENSBTAT00000002992 GeneID:280719
KEGG:bta:280719 CTD:275 GeneTree:ENSGT00510000047333
HOVERGEN:HBG005822 InParanoid:P25285 OrthoDB:EOG45MN5K
NextBio:20804898 Uniprot:P25285
Length = 397
Score = 116 (45.9 bits), Expect = 0.00069, P = 0.00069
Identities = 62/288 (21%), Positives = 113/288 (39%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + ++ G DR++ + + + L+ QG ++F +D
Sbjct: 74 DVSHMLQTKIFGCDRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTSASEGH 133
Query: 168 ILVVSPLTC--SSITEMLNKYVFFADK-VEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ VVS C +T M +K +K ++ L + GP + QV++ DL
Sbjct: 134 LYVVSNAGCREKDLTLMQDKVRELQNKGSDVALEVMDNALLALQGPTAAQVLQAGVADDL 193
Query: 225 VGEAYGTH---RHYSVNGMPITVGVGNVISEEGFSLLMSPAAAGSVWETLLSQGAVPM-G 280
+ T + V+G +T G E+G + + A A + LL V + G
Sbjct: 194 RKLPFMTSAVMEVFGVSGCRVT-RCGYT-GEDGVEISVPAAEAVHLAAALLKNPEVKLAG 251
Query: 281 SNAWEKLRIIKGRPAPGKELTNEFNVLEAGL-WNSISLDKGC--YKGQETISRLITYDGL 337
A + LR+ G G ++ +E L W + + G I +
Sbjct: 252 LAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIVPQLKSKAQ 311
Query: 338 KQRLWGICLSAPAEPGSPIIV-DGKKVGKLTSYTLGRKESDHFGLGYI 384
++R+ +C AP SPI+ +G +G +TS + +GY+
Sbjct: 312 RRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCPSPCLKKNVAMGYV 359
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 425 414 0.00081 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 612 (65 KB)
Total size of DFA: 246 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.93u 0.11s 34.04t Elapsed: 00:00:01
Total cpu time: 33.94u 0.11s 34.05t Elapsed: 00:00:01
Start: Tue May 21 09:30:14 2013 End: Tue May 21 09:30:15 2013