Your job contains 1 sequence.
>014413
MSPSLGSPYQWLRELKSEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDT
MQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTN
QAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAH
RLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIA
LKNSLLANGYGYSQSPDSVSSSPLSPNASAKMDSFLNSLWGLSPKVMVVTEQDSNHNGLT
LMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKL
EKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSA
WSCRK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014413
(425 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 915 6.0e-159 2
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 351 2.5e-62 2
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 407 4.9e-60 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 326 1.6e-58 2
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 338 3.0e-57 2
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 334 1.6e-56 2
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 340 1.9e-56 2
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 321 9.9e-56 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 328 3.7e-55 2
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 324 1.5e-53 2
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 308 3.5e-51 2
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 294 5.3e-48 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 311 1.8e-46 2
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 274 1.3e-41 3
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 290 1.5e-40 2
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 274 6.6e-40 2
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 252 1.2e-35 3
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 253 1.7e-35 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 270 4.3e-34 2
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 265 9.3e-34 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 260 3.5e-33 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 241 9.5e-32 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 207 3.1e-30 2
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 247 4.6e-30 2
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 220 1.1e-23 2
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 148 2.4e-17 2
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 158 5.1e-17 2
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 136 1.1e-13 2
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 139 2.9e-13 2
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 126 2.0e-12 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 185 1.4e-11 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 151 5.3e-09 2
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 120 1.0e-06 1
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 915 (327.2 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 175/230 (76%), Positives = 212/230 (92%)
Query: 7 SPYQWLRELKSEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAA 66
SP+ L++LK EERGLYLIHLLL+CANHVA+GSL+NAN AL+Q+S LASPDGDTMQRIAA
Sbjct: 37 SPFHCLKDLKPEERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAA 96
Query: 67 YFTEALAQRILKSWPGLHKALNST--RISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAII 124
YFTEALA RILKSWPGL+KALN+T R ++VSEE+ VR+LFF+MFP LKV+++LTN+AI+
Sbjct: 97 YFTEALANRILKSWPGLYKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAIL 156
Query: 125 EAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTE 184
EAMEGEK+VHVIDL+A+EPAQW+AL+QA ++RPEGPPHLRITG+H QKEVL+QMAHRL E
Sbjct: 157 EAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIE 216
Query: 185 EAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADD 234
EAEKLDIPFQFN VVS+L+ L+ ++LRVKTGEALA+SSVLQLH+ LA+DD
Sbjct: 217 EAEKLDIPFQFNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASDD 266
Score = 655 (235.6 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 129/204 (63%), Positives = 151/204 (74%)
Query: 222 SVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWG 281
S + L +L ++ A +N + +N GY + DSFLN++WG
Sbjct: 282 SGVDLQRVLMMSHGSAAEARENDM-SNNNGYSPSGDSASSLPLPSS--GRTDSFLNAIWG 338
Query: 282 LSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEE 341
LSPKVMVVTEQDS+HNG TLMERLLE+LY+YAALFDCLE+ V RTS +R+KVEKMLFGEE
Sbjct: 339 LSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEE 398
Query: 342 IKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRIAE 401
IKNII+CEGFER+ERHEKLEKW QR DLA FGNVPLSY MLQARRLLQ DGYRI E
Sbjct: 399 IKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKE 458
Query: 402 DNRCVLICWHDRPLFSVSAWSCRK 425
++ C +ICW DRPL+SVSAW CRK
Sbjct: 459 ESGCAVICWQDRPLYSVSAWRCRK 482
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 351 (128.6 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 80/219 (36%), Positives = 127/219 (57%)
Query: 15 LKSEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQ 74
L S+E G+ L+H LL+CA V +L+ A+ + + LAS M+++A YF E LA+
Sbjct: 143 LDSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLAR 202
Query: 75 RILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVH 134
RI + +P + +SS S+ + + F++ P+LK A NQAI+E + VH
Sbjct: 203 RIYRIYPR-----DDVALSSFSDTLQIH--FYESCPYLKFAHFTANQAILEVFATAEKVH 255
Query: 135 VIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQ 194
VIDL QW ALIQAL+ RP GPP R+TGI + ++ +L + A + + F+
Sbjct: 256 VIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFE 315
Query: 195 FNSV-VSKLENLDFDKLRVKTG-EALAISSVLQLHSLLA 231
F S+ ++ L +L + L ++ G E++A++SV +LH LLA
Sbjct: 316 FKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLA 354
Score = 304 (112.1 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 62/151 (41%), Positives = 90/151 (59%)
Query: 272 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERL 331
+D FL+++ + P +M V EQ++NHNG ++R E+L+ Y++LFD LE S+ +R+
Sbjct: 359 IDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQ---DRV 415
Query: 332 KVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQS 391
E L G +I N++ACEG +R ERHE L +W RF L F V + QA LL
Sbjct: 416 MSELFL-GRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLAL 474
Query: 392 Y-NCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
Y DGY + E+ C+L+ W RPL + SAW
Sbjct: 475 YAGADGYNVEENEGCLLLGWQTRPLIATSAW 505
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 407 (148.3 bits), Expect = 4.9e-60, Sum P(2) = 4.9e-60
Identities = 91/220 (41%), Positives = 136/220 (61%)
Query: 12 LRELKSEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEA 71
++ K +E GL+L+ LLL CA V+ +LE AN L +ISQL++P G + QR+AAYF+EA
Sbjct: 278 IKRQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEA 337
Query: 72 LAQRILKSWPGLHKALNSTRISSVSEEMLVR--KLFFDMFPFLKVAFVLTNQAIIEAMEG 129
++ R+L S G++ AL S + +V ++F + P +K + NQAI EA E
Sbjct: 338 MSARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEK 397
Query: 130 EKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKL 189
E VH+IDL+ + QW L L++RP GPPH+R+TG+ E L RL++ A+KL
Sbjct: 398 EDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKL 457
Query: 190 DIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSL 229
+PF+F + K+ NLD ++L V+ EA+A+ LQ HSL
Sbjct: 458 GLPFEFCPLAEKVGNLDTERLNVRKREAVAVHW-LQ-HSL 495
Score = 235 (87.8 bits), Expect = 4.9e-60, Sum P(2) = 4.9e-60
Identities = 55/151 (36%), Positives = 83/151 (54%)
Query: 277 NSLW---GLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKV 333
++LW L+PKV+ V EQD +H G + + R +EA++ Y+ALFD L +S S ER V
Sbjct: 504 HTLWLLQRLAPKVVTVVEQDLSHAG-SFLGRFVEAIHYYSALFDSLGASYGEESEERHVV 562
Query: 334 EKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYN 393
E+ L +EI+N++A G R K E W ++ F + L+ QA LL +
Sbjct: 563 EQQLLSKEIRNVLAVGGPSRSGE-VKFESWREKMQQCGFKGISLAGNAATQATLLLGMFP 621
Query: 394 CDGYRIAEDNRCVLICWHDRPLFSVSAWSCR 424
DGY + +DN + + W D L + SAW+ R
Sbjct: 622 SDGYTLVDDNGTLKLGWKDLSLLTASAWTPR 652
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 326 (119.8 bits), Expect = 1.6e-58, Sum P(2) = 1.6e-58
Identities = 80/237 (33%), Positives = 131/237 (55%)
Query: 17 SEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRI 76
S+E G+ L+H L++CA + +L A+ + ++ LA M ++A YF +ALA+RI
Sbjct: 173 SQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRI 232
Query: 77 LKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVI 136
+ + + S EE+L F++ P+LK A NQAI+EA+ + VHVI
Sbjct: 233 YRDYTAETDVCAAVNPSF--EEVLEMH-FYESCPYLKFAHFTANQAILEAVTTARRVHVI 289
Query: 137 DLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQK----EVLDQMAHRLTEEAEKLDIP 192
DL + QW AL+QAL+ RP GPP R+TGI P + + L Q+ +L + A+ + +
Sbjct: 290 DLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVE 349
Query: 193 FQFNSVVSK-LENLDFDKLRVKT-GEALAISSVLQLHSLLAADDYASLIALKNSLLA 247
F+F + ++ L +L+ + + E L ++SV +LH LLA S+ L N++ A
Sbjct: 350 FEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARS--GSIEKLLNTVKA 404
Score = 302 (111.4 bits), Expect = 1.6e-58, Sum P(2) = 1.6e-58
Identities = 61/151 (40%), Positives = 90/151 (59%)
Query: 272 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERL 331
++ LN++ + P ++ V EQ++NHNG+ ++R EAL+ Y++LFD LE S S S +R+
Sbjct: 395 IEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRV 454
Query: 332 KVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQS 391
E L G +I N++A EG +R ERHE +W R A F + L QA LL
Sbjct: 455 MSEVYL-GRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSL 513
Query: 392 YNC-DGYRIAEDNRCVLICWHDRPLFSVSAW 421
Y DGYR+ E++ C++I W RPL + SAW
Sbjct: 514 YATGDGYRVEENDGCLMIGWQTRPLITTSAW 544
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 338 (124.0 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 83/221 (37%), Positives = 127/221 (57%)
Query: 17 SEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRI 76
S+E G+ L+H LL+CA V +L A + QI LA M+++A YF EALA+RI
Sbjct: 162 SQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRI 221
Query: 77 LKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVI 136
+ P S S+S+ + + F++ P+LK A NQAI+EA +G+K VHVI
Sbjct: 222 YRLSPS-----QSPIDHSLSDTLQMH--FYETCPYLKFAHFTANQAILEAFQGKKRVHVI 274
Query: 137 DLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQK----EVLDQMAHRLTEEAEKLDIP 192
D + ++ QW AL+QAL+ RP GPP R+TGI P + L ++ +L AE + +
Sbjct: 275 DFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVE 334
Query: 193 FQFNSVVSK-LENLDFDKLRVKTGE--ALAISSVLQLHSLL 230
F++ V+ L +LD L ++ E ++A++SV +LH LL
Sbjct: 335 FEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLL 375
Score = 275 (101.9 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 272 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERL 331
+D L + + P++ V EQ+SNHN ++R E+L+ Y+ LFD LE S +++
Sbjct: 381 IDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPS--GQDKV 438
Query: 332 KVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQS 391
E L G++I N++AC+G +R ERHE L +W RF A F + QA LL
Sbjct: 439 MSEVYL-GKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLAL 497
Query: 392 YNC-DGYRIAEDNRCVLICWHDRPLFSVSAW 421
+N +GYR+ E + C+++ WH RPL + SAW
Sbjct: 498 FNGGEGYRVEESDGCLMLGWHTRPLIATSAW 528
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 334 (122.6 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 81/221 (36%), Positives = 124/221 (56%)
Query: 17 SEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRI 76
S+E G+ L+H L++CA + +L A + QI LA M+++A YF EALA+RI
Sbjct: 214 SQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRI 273
Query: 77 LKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVI 136
+ P +I + L + F++ P+LK A NQAI+EA EG+K VHVI
Sbjct: 274 YRLSPP------QNQIDHCLSDTL-QMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVI 326
Query: 137 DLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIP 192
D + + QW AL+QAL+ R GPP R+TGI P + L ++ +L + AE + +
Sbjct: 327 DFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVE 386
Query: 193 FQFNS-VVSKLENLDFDKLRVKTG--EALAISSVLQLHSLL 230
F++ V + L +LD L ++ EA+A++SV +LH LL
Sbjct: 387 FEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLL 427
Score = 277 (102.6 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 57/141 (40%), Positives = 82/141 (58%)
Query: 282 LSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEE 341
+ P + V EQ+SNHNG ++R E+L+ Y+ LFD LE + S +++ E L G++
Sbjct: 443 IKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPN--SQDKVMSEVYL-GKQ 499
Query: 342 IKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNC-DGYRIA 400
I N++ACEG +R ERHE L +W RF + L QA LL +N GYR+
Sbjct: 500 ICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVE 559
Query: 401 EDNRCVLICWHDRPLFSVSAW 421
E N C+++ WH RPL + SAW
Sbjct: 560 ESNGCLMLGWHTRPLITTSAW 580
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 340 (124.7 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 79/218 (36%), Positives = 128/218 (58%)
Query: 18 EERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRIL 77
EE G+ L+ L++CA V +L A+ + ++ LA+ M ++A YF EALA+RI
Sbjct: 151 EETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIY 210
Query: 78 KSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVID 137
+ P ++ I EE+L F+D P+LK A NQAI+EA+ +VVHVID
Sbjct: 211 RIHP------SAAAIDPSFEEILQMN-FYDSCPYLKFAHFTANQAILEAVTTSRVVHVID 263
Query: 138 LNAAEPAQWIALIQALSTRPEGPPHLRITGI-HPQ-KEVLDQMAHRLTEEAEKLDIPFQF 195
L + QW AL+QAL+ RP GPP R+TG+ +P +E + ++ +L + A+ + + F+F
Sbjct: 264 LGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFKF 323
Query: 196 NSVVS-KLENLDFDKLRVKT-GEALAISSVLQLHSLLA 231
N + + +L +L+ D +T E L ++SV +LH +L+
Sbjct: 324 NGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLS 361
Score = 264 (98.0 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 58/151 (38%), Positives = 88/151 (58%)
Query: 272 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERL 331
++ L ++ + P ++ V EQ++NHNG ++R EAL+ Y++LFD LE V S +R+
Sbjct: 366 IEKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRV 425
Query: 332 KVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQ- 390
E L G +I N++A EG +R ERHE L +W +R A F V L QA LL
Sbjct: 426 MSEVYL-GRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLAL 484
Query: 391 SYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
S DGYR+ E++ +++ W +PL + SAW
Sbjct: 485 SGGGDGYRVEENDGSLMLAWQTKPLIAASAW 515
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 321 (118.1 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 74/220 (33%), Positives = 123/220 (55%)
Query: 27 LLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKA 86
+L++CA V+ +L A + ++ + S G+ +QR+ AY E L R+ S ++K+
Sbjct: 53 VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112
Query: 87 LNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQW 146
L S S E + + ++ P+ K ++ N AI EAM+ E+ +H+ID + +QW
Sbjct: 113 LQSREPESY-EFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQW 171
Query: 147 IALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLD 206
IALIQA + RP G P++RITG+ VL + RL + A+K D+PF+FN+V ++
Sbjct: 172 IALIQAFAARPGGAPNIRITGVG-DGSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVE 230
Query: 207 FDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLL 246
+ L V+ GEAL ++ LH L D+ S+ ++ LL
Sbjct: 231 VENLDVRDGEALGVNFAYMLHHL--PDESVSMENHRDRLL 268
Score = 271 (100.5 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 60/149 (40%), Positives = 82/149 (55%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK 332
D L + LSPKV+ + EQ+ N N + R LE L Y A+F+ ++ + R ER+
Sbjct: 265 DRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERIN 324
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY 392
+E+ ++ NIIACEG ER ERHE L KW RF +A F PLS R LL+ Y
Sbjct: 325 IEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDY 384
Query: 393 NCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
+ +GY I E + + + W DR L S AW
Sbjct: 385 S-NGYAIEERDGALYLGWMDRILVSSCAW 412
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 328 (120.5 bits), Expect = 3.7e-55, Sum P(2) = 3.7e-55
Identities = 69/208 (33%), Positives = 116/208 (55%)
Query: 28 LLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKAL 87
L+SCA ++ L A+ ++++ Q+ S G+ +QR+ AY E L ++ S ++KAL
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182
Query: 88 NSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWI 147
N + +E + + +++ P+ K ++ N AI EAM+ E VH+ID + +QW+
Sbjct: 183 NRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWV 242
Query: 148 ALIQALSTRPEGPPHLRITGIHPQKEV------LDQMAHRLTEEAEKLDIPFQFNSVVSK 201
LIQA + RP GPP +RITGI L + +RL + A++ ++PF+FNSV
Sbjct: 243 TLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVS 302
Query: 202 LENLDFDKLRVKTGEALAISSVLQLHSL 229
+ + L V+ GEALA++ LH +
Sbjct: 303 VSEVKPKNLGVRPGEALAVNFAFVLHHM 330
Score = 261 (96.9 bits), Expect = 3.7e-55, Sum P(2) = 3.7e-55
Identities = 56/149 (37%), Positives = 84/149 (56%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK 332
D L + LSPKV+ + EQ+SN N R +E + YAA+F+ ++ ++ R +R+
Sbjct: 342 DRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRIN 401
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY 392
VE+ ++ NIIACEG +R ERHE L KW RF +A F PLS + LL++Y
Sbjct: 402 VEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNY 461
Query: 393 NCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
+ D YR+ E + + + W R L + AW
Sbjct: 462 S-DKYRLEERDGALYLGWMHRDLVASCAW 489
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 324 (119.1 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 76/224 (33%), Positives = 119/224 (53%)
Query: 13 RELKSEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEAL 72
R ++ RG L +L CA V N LE + + Q+ Q+ S G+ +QR+ AY E L
Sbjct: 217 RSMEMISRG-DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGL 275
Query: 73 AQRILKSWPGLHKALNSTRISSVSEEMLV-RKLFFDMFPFLKVAFVLTNQAIIEAMEGEK 131
R+ S ++KAL E+L + ++ P+ K + N AI EA++ E
Sbjct: 276 VARLASSGSSIYKALRCK--DPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNES 333
Query: 132 VVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIH-PQKEV-----LDQMAHRLTEE 185
VH+ID ++ QW++LI+AL RP GPP++RITGI P+ L+ + RL +
Sbjct: 334 FVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKL 393
Query: 186 AEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSL 229
AE +PF+F+ ++ +KL V+ GEALA++ L LH +
Sbjct: 394 AEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHM 437
Score = 260 (96.6 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 54/149 (36%), Positives = 85/149 (57%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK 332
D L + LSP V+ + EQ++N N + R +E + Y A+F+ ++ ++R ER+
Sbjct: 449 DRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERIN 508
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY 392
VE+ E+ N+IACEG ER+ERHE L KW RF +A F PLS + LL+SY
Sbjct: 509 VEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESY 568
Query: 393 NCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
+ + Y + E + + + W ++PL + AW
Sbjct: 569 S-EKYTLEERDGALYLGWKNQPLITSCAW 596
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 308 (113.5 bits), Expect = 3.5e-51, Sum P(2) = 3.5e-51
Identities = 75/236 (31%), Positives = 123/236 (52%)
Query: 19 ERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDT-MQRIAAYFTEALAQRIL 77
+R L++LL C + + + ++ N + + LASP G T M R+ AY+ EALA R+
Sbjct: 269 QRDFELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVA 328
Query: 78 KSWPGLHKALNSTRISSVSEEMLVRKLFF--DMFPFLKVAFVLTNQAIIEAMEGEKVVHV 135
+ WP + E+ L F + P K N+ ++ A EG++ VH+
Sbjct: 329 RMWPHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHI 388
Query: 136 IDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQF 195
ID + + QW + Q+L++R P H+RITGI K L++ RL AE +++ F+F
Sbjct: 389 IDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQFEF 448
Query: 196 NSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLL------AADDYASLIALKNSL 245
+ VV +LE++ L VK GE++A++ V+Q+H L A D+ LI N +
Sbjct: 449 HPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPI 504
Score = 257 (95.5 bits), Expect = 3.5e-51, Sum P(2) = 3.5e-51
Identities = 58/166 (34%), Positives = 97/166 (58%)
Query: 270 AKMDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSME 329
A + FL + +P +V+ EQ++ HN L R+ +L Y+A+FD + ++++ S+
Sbjct: 489 AAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLM 548
Query: 330 RLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLL 389
R+KVE+MLFG EI+NI+ACEG R+ERH W + + F ++ +S +LQ++ LL
Sbjct: 549 RVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLL 608
Query: 390 QSYNCD--GY----RIAEDNRC-------VLICWHDRPLFSVSAWS 422
+ Y D G+ R EDN V + W ++PL+++SAW+
Sbjct: 609 RMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAWT 654
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 294 (108.6 bits), Expect = 5.3e-48, Sum P(2) = 5.3e-48
Identities = 73/226 (32%), Positives = 122/226 (53%)
Query: 27 LLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKA 86
+L+SCA ++ G LE A ++++ Q+ S GD QRIAAY E LA R+ S +++A
Sbjct: 225 ILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRA 284
Query: 87 LNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQW 146
L S E + ++ F++ P K F+ N AI+EA++GE+ VH+ID + + Q+
Sbjct: 285 LKCKEPPS-DERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQY 343
Query: 147 IALIQALSTRPEGPPHLRITGIHPQKEV------LDQMAHRLTEEAEKLDIPFQFNSVVS 200
+ LI++++ P P LR+TGI + V L + RL + AE + F+F ++ S
Sbjct: 344 MTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPS 403
Query: 201 KLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLL 246
K + L K GE L ++ QLH + D+ + + ++ LL
Sbjct: 404 KTSIVSPSTLGCKPGETLIVNFAFQLHHM--PDESVTTVNQRDELL 447
Score = 257 (95.5 bits), Expect = 5.3e-48, Sum P(2) = 5.3e-48
Identities = 53/149 (35%), Positives = 82/149 (55%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK 332
D L+ + L+PK++ V EQD N N R +EA Y+A+F+ L+ ++ R S ER+
Sbjct: 444 DELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMN 503
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY 392
VE+ +I NI+ACEG ER ER+E KW R +A F P+S + L++
Sbjct: 504 VERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQ 563
Query: 393 NCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
C+ Y++ E+ + CW ++ L SAW
Sbjct: 564 YCNKYKLKEEMGELHFCWEEKSLIVASAW 592
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 311 (114.5 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 68/201 (33%), Positives = 112/201 (55%)
Query: 24 LIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSW-PG 82
L+ LLL CA +VA L A+ L +IS++ SP G + +R+ AYF +AL R++ S+ G
Sbjct: 40 LLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSG 99
Query: 83 LHKALNSTRISSVSEEMLVRKL--FFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNA 140
L+ ++ V + + L + + P +K + NQAI +A++GE VH+IDL+
Sbjct: 100 ACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDV 159
Query: 141 AEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVS 200
+ QW AL L++RP +RITG ++L RL + A L++PF+F+ +
Sbjct: 160 MQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEG 219
Query: 201 KLENL-DFDKLRVKTGEALAI 220
+ NL D +L + GEA+ +
Sbjct: 220 IIGNLIDPSQLATRQGEAVVV 240
Score = 193 (73.0 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 51/147 (34%), Positives = 75/147 (51%)
Query: 276 LNSLWGLSPKVMVVTEQDSNHN-GLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVE 334
L L L P ++ V EQ+ +++ G + + R +EAL+ Y+ALFD L + S ER VE
Sbjct: 258 LEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVE 317
Query: 335 KMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNC 394
+++ G EI+NI+A G RK KW + F V L QA LL
Sbjct: 318 QIVLGTEIRNIVAHGGGRRKRM-----KWKEELSRVGFRPVSLRGNPATQAGLLLGMLPW 372
Query: 395 DGYRIAEDNRCVLICWHDRPLFSVSAW 421
+GY + E+N + + W D L + SAW
Sbjct: 373 NGYTLVEENGTLRLGWKDLSLLTASAW 399
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 274 (101.5 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 54/148 (36%), Positives = 91/148 (61%)
Query: 275 FLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVE 334
FL+++ L+ +++ + E+++NH + + R EA+ Y A+FD LE+++ S ERL +E
Sbjct: 297 FLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLE 356
Query: 335 KMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQ-SYN 393
+ FG+EI +++A E ERK+RH + E W + F NVP+ + QA+ LL+ Y
Sbjct: 357 QRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYP 416
Query: 394 CDGYRIAEDNRCVLICWHDRPLFSVSAW 421
+GY + N + + W +RPLFSVS+W
Sbjct: 417 SEGYNLQFLNNSLFLGWQNRPLFSVSSW 444
Score = 165 (63.1 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 46/137 (33%), Positives = 74/137 (54%)
Query: 110 PFLKVAFVLTNQAIIEAMEGEK--VVHVIDLNAAEPAQWIALIQALSTR---PEGPP-HL 163
PF++ + NQAI++A E +H++DL+ ++ QW L+QAL+ R P PP L
Sbjct: 154 PFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSL 213
Query: 164 RITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKT-------GE 216
RITG L++ RLT A+ L + FQF+++V E+L L+++ GE
Sbjct: 214 RITGCGRDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGE 273
Query: 217 ALAISSVLQLHSLLAAD 233
+A++ V LH + D
Sbjct: 274 TIAVNCVHFLHKIFNDD 290
Score = 83 (34.3 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 23 YLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRI 76
+L LL + AN V+ + A L +S +SP GD+ +R+ FT+AL+ RI
Sbjct: 40 HLRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 290 (107.1 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 65/211 (30%), Positives = 116/211 (54%)
Query: 27 LLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKA 86
LL+ CA V+ AN L QI + +SP G+ +R+A YF +L R+ + ++ A
Sbjct: 396 LLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTA 455
Query: 87 LNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQW 146
L+S + +S ++ + + + + PF K A + N +++ +H+ID + QW
Sbjct: 456 LSSKK-TSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQW 514
Query: 147 IALIQALS-TRPEGPPHLRITGIH-PQK-----EVLDQMAHRLTEEAEKLDIPFQFNSVV 199
ALI LS +RP G P LRITGI PQ+ E + + HRL ++ ++PF++N++
Sbjct: 515 PALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIA 574
Query: 200 SKLENLDFDKLRVKTGEALAISSVLQLHSLL 230
K E + + L+++ GE + ++S+ + +LL
Sbjct: 575 QKWETIQVEDLKLRQGEYVVVNSLFRFRNLL 605
Score = 199 (75.1 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 45/149 (30%), Positives = 76/149 (51%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK 332
D+ L + ++P V + N+N + R EAL+ Y+A+FD +S ++R RL
Sbjct: 616 DAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLM 675
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY 392
EK +G EI N++ACEG ER ER E ++W R A F +PL M + +++
Sbjct: 676 YEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENG 735
Query: 393 NCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
+ + ++ +L W R +++ S W
Sbjct: 736 YDKNFDVDQNGNWLLQGWKGRIVYASSLW 764
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 274 (101.5 bits), Expect = 6.6e-40, Sum P(2) = 6.6e-40
Identities = 71/215 (33%), Positives = 114/215 (53%)
Query: 24 LIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGL 83
L+ + CA +++ A+ L QI + S GD +R+A YFTEAL+ R+ + P
Sbjct: 217 LLKAIYDCAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPA- 274
Query: 84 HKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEP 143
S+ SS + +L K D P+ K A + NQAI+EA E +H++D +
Sbjct: 275 ----TSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQG 330
Query: 144 AQWIALIQALSTRPEGPP-HLRITGI-------HPQKEVLDQMAHRLTEEAEKLDIPFQF 195
QW AL+QAL+TR G P +R++GI P+ ++ +RL + A+ LD+ F F
Sbjct: 331 IQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLI-ATGNRLRDFAKVLDLNFDF 389
Query: 196 NSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLL 230
+++ + L+ RV E LA++ +LQL+ LL
Sbjct: 390 IPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLL 424
Score = 212 (79.7 bits), Expect = 6.6e-40, Sum P(2) = 6.6e-40
Identities = 54/154 (35%), Positives = 86/154 (55%)
Query: 272 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERL 331
+D+ L L+P+V+ + E + + N + R+ AL Y+A+F+ LE ++ R S ER+
Sbjct: 431 VDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERV 490
Query: 332 KVEKMLFGEEIKNIIACE--GFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLL 389
+VE+ LFG I +I E G R ER E+ E+W + A F +V LS + QA+ LL
Sbjct: 491 RVERELFGRRISGLIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILL 549
Query: 390 QSYNCDG-YRIAEDNR-CVLICWHDRPLFSVSAW 421
+YN Y I E + + W+D PL ++S+W
Sbjct: 550 WNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSW 583
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 252 (93.8 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 67/202 (33%), Positives = 104/202 (51%)
Query: 27 LLLSCANHVANGSLENANLALDQI-SQLASPDGDTMQRIAAYFTEALAQRI-LKSWPGLH 84
LLL+CA+ + G L A A + + + ASP GD R+A +F ALA R+ K+ G H
Sbjct: 53 LLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHG-H 111
Query: 85 KALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPA 144
+ S + F + PFL+ A + NQAI+EA++G + VH++DL+A
Sbjct: 112 VVVGGGAARPASSGAYLA--FNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGV 169
Query: 145 QWIALIQALSTRPE---GPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVV-S 200
QW L+QA++ R + GPP +R+TG ++ L + +RL A + +PF F ++ S
Sbjct: 170 QWPPLLQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFHFTPLLLS 229
Query: 201 KLENLDFDKLRVKTGEALAISS 222
TG A A S+
Sbjct: 230 CATTAPHHVAGTSTGAAAAAST 251
Score = 177 (67.4 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 53/158 (33%), Positives = 81/158 (51%)
Query: 271 KMDSFLNSLWGLSPKVMVVTEQDSNHNGL------TLMERLLEALYSYAALFDCLESSVS 324
++ +FL + +SP V+ + E+++ G L R+ A+ Y+A+F+ LE++V
Sbjct: 282 ELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVP 341
Query: 325 RTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQ 384
S ERL VE+ + G EI+ + G R R +E+W A F PLS + Q
Sbjct: 342 PGSRERLAVEQEVLGREIEAAVGPSG-GRWWRG--IERWGGAARAAGFAARPLSAFAVSQ 398
Query: 385 ARRLLQ-SYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
AR LL+ Y +GY + E + W RPL SVSAW
Sbjct: 399 ARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAW 436
Score = 47 (21.6 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 216 EALAISSVLQLHSLLAADDYASLI 239
E LA++ V+ LH+L D+ A+ +
Sbjct: 264 ETLAVNCVMFLHNLAGHDELAAFL 287
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 253 (94.1 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 66/224 (29%), Positives = 114/224 (50%)
Query: 16 KSEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQR 75
K + R + LL CA V+ G A+ L QI + SP GD QR+A +F AL R
Sbjct: 307 KKKSRAVDFRTLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEAR 366
Query: 76 ILKSWPGLHKALN---STRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKV 132
+ S + ++ S++ + ++ + +F PF+ + + +N+ I++A + V
Sbjct: 367 LEGSTGTMIQSYYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASV 426
Query: 133 VHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIH-PQK-----EVLDQMAHRLTEEA 186
+H++D QW IQ LS G LRITGI PQ E + RLTE
Sbjct: 427 LHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYC 486
Query: 187 EKLDIPFQFNSVVSK-LENLDFDKLRVKTGEALAISSVLQLHSL 229
++ +PF++N++ SK E + ++ +++ E LA+++VL+ +L
Sbjct: 487 KRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNL 530
Score = 200 (75.5 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 50/152 (32%), Positives = 80/152 (52%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK 332
D FL + ++P V + + + + N R EAL+ Y+ALFD +++S+ + ER+
Sbjct: 543 DGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIH 602
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQA-RRLLQS 391
E +G E+ N+IACEG +R ER E ++W R A F P+ ++Q R ++
Sbjct: 603 FEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVE-AELVQLFREKMKK 661
Query: 392 --YNCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
Y+ D + + ED+ L W R LFS S W
Sbjct: 662 WGYHKD-FVLDEDSNWFLQGWKGRILFSSSCW 692
Score = 43 (20.2 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 79 SWPGLHKALNSTRISSVSEEMLVRKLFFD 107
S+PG + + + E+LVR +F D
Sbjct: 159 SFPGSNMLRGGEQFGQPANEILVRSMFSD 187
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 270 (100.1 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 73/228 (32%), Positives = 116/228 (50%)
Query: 27 LLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSW-PGLHK 85
LL CA VA+ A L +I +S +GD QR+A YF EAL RI + P +
Sbjct: 227 LLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSN 286
Query: 86 ALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIE-AMEGEKVVHVIDLNAAEPA 144
S+ S V + + KLF P + N++I E AM+ K+ H++D
Sbjct: 287 PFPSSTTSMV-DILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKL-HIVDFGVLYGF 344
Query: 145 QWIALIQALSTRPEGPPHLRITGIH-PQ-----KEVLDQMAHRLTEEAEKLDIPFQFNSV 198
QW L++ALS RP GPP LR+TGI PQ + +++ RL ++ ++PF+FN +
Sbjct: 345 QWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFI 404
Query: 199 VSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLL 246
K E + D+L + GE ++ + +L D+ SL + ++++L
Sbjct: 405 AKKWETITLDELMINPGETTVVNCIHRLQ--YTPDETVSLDSPRDTVL 450
Score = 163 (62.4 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 43/152 (28%), Positives = 76/152 (50%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTS--MER 330
D+ L ++P + V E + +N M R EAL+ Y++LFD ++++ R
Sbjct: 447 DTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNR 506
Query: 331 LKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQ 390
+E+ L + ++I+CEG ER R E ++W R A F +S M +A+ +++
Sbjct: 507 SLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVR 566
Query: 391 S-YNCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
Y+ D + I DN +L W R +++ S W
Sbjct: 567 KRYHRD-FVIDSDNNWMLQGWKGRVIYAFSCW 597
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 265 (98.3 bits), Expect = 9.3e-34, Sum P(2) = 9.3e-34
Identities = 74/220 (33%), Positives = 117/220 (53%)
Query: 27 LLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHK- 85
+LL A ++ A L +++L+SP GDT Q++A+YF +AL R+ S ++
Sbjct: 146 VLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRT 205
Query: 86 ----ALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAA 141
A S S V K F ++ P+ V N AI+EA++GE +H++D+++
Sbjct: 206 MVTAAATEKTCSFESTRKTVLK-FQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISST 264
Query: 142 EPAQWIALIQALSTRPEGPPHLRITGIH-PQKEVLDQMA-HRLTEEA----EK----LDI 191
QW L++AL+TR + PHLR+T + K V DQ A HR+ +E EK + +
Sbjct: 265 FCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGV 324
Query: 192 PFQFNSV--VSKLENLDFDKLRVKTGEALAISSVLQLHSL 229
PF+FN + V L D ++L VK E LAI+ V +H +
Sbjct: 325 PFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGI 364
Score = 163 (62.4 bits), Expect = 9.3e-34, Sum P(2) = 9.3e-34
Identities = 46/158 (29%), Positives = 75/158 (47%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSN-----HNGLT--LMERLLEALYSYAALFDCLESSVSR 325
D+ ++S L P+++ V E++++ G + E L + F+ E S R
Sbjct: 372 DAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPR 431
Query: 326 TSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQA 385
TS ERL +E+ G I +++ACE + ER E KW +R + FG V S
Sbjct: 432 TSNERLMLERAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDV 490
Query: 386 RRLLQSYNCDGYRIAE--DNRCVLICWHDRPLFSVSAW 421
R LL+ Y + + + D + +CW D+P+ SAW
Sbjct: 491 RALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAW 528
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 260 (96.6 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
Identities = 76/247 (30%), Positives = 124/247 (50%)
Query: 6 GSPYQWLRELKSEERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIA 65
GS ++ ++ KS++ + + +LL+ CA VA+ A L +I + +S GD QR+
Sbjct: 193 GSSNRY-KQQKSDQP-VDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLG 250
Query: 66 AYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIE 125
+F EAL RI + A S+R S V + + K F P L + + N+ I E
Sbjct: 251 YHFAEALEARITGTMTTPISA-TSSRTSMV-DILKAYKGFVQACPTLIMCYFTANRTINE 308
Query: 126 AMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIH-PQK-----EVLDQMA 179
+H+ID QW LIQALS R GPP LR+TGI PQ E +++
Sbjct: 309 LASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETG 368
Query: 180 HRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLI 239
RL +K ++PF+++ + EN+ D L + +GE ++ +L+L D+ SL
Sbjct: 369 RRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQ--YTPDETVSLN 426
Query: 240 ALKNSLL 246
+ +++ L
Sbjct: 427 SPRDTAL 433
Score = 166 (63.5 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK 332
D+ L ++P + V E + +N + R EAL+ ++LFD E+++S R
Sbjct: 430 DTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTL 489
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQS- 391
VE+ L + ++IACEG ER R E ++W R A F LS + + +++
Sbjct: 490 VERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKER 549
Query: 392 YNCDGYRIAEDNRCVLICWHDRPLFSVSAWSCRK 425
Y+ D + I DN + W R L++VS W K
Sbjct: 550 YHKD-FVIDNDNHWMFQGWKGRVLYAVSCWKPAK 582
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 241 (89.9 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
Identities = 67/201 (33%), Positives = 108/201 (53%)
Query: 47 LDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFF 106
L +I + S GD +QR+ YF EAL+ + +S P +S+ SS+ + +L K
Sbjct: 195 LIRIKESVSESGDPIQRVGYYFAEALSHKETES-P------SSSSSSSLEDFILSYKTLN 247
Query: 107 DMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPP-HLRI 165
D P+ K A + NQAI+EA +H++D + QW AL+QAL+TR G P +RI
Sbjct: 248 DACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRI 307
Query: 166 TGIHPQKEVLDQ-------MAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEAL 218
+GI P + D +RL + A LD+ F+F V++ ++ L+ RV E L
Sbjct: 308 SGI-PAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVL 366
Query: 219 AISSVLQLHSLLAADDYASLI 239
++ +L+L+ LL D+ A+ +
Sbjct: 367 VVNFMLELYKLL--DETATTV 385
Score = 174 (66.3 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
Identities = 45/147 (30%), Positives = 80/147 (54%)
Query: 282 LSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEE 341
L+P+++ + E + + N + R+ +L Y+A+F+ LE ++ R S ERL+VE++LFG
Sbjct: 395 LNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRR 454
Query: 342 IKNIIACEGFERKE--RH---EKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDG 396
I +++ + K R E+ E+W + A F V S + QA+ LL +YN
Sbjct: 455 IMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYST 514
Query: 397 -YRIAEDNR-CVLICWHDRPLFSVSAW 421
Y + E + + W++ PL +VS+W
Sbjct: 515 LYSLVESEPGFISLAWNNVPLLTVSSW 541
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 207 (77.9 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 58/209 (27%), Positives = 99/209 (47%)
Query: 27 LLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKA 86
LL+ CA VA A L QI ++P GD QR+A F L R+ + ++K
Sbjct: 347 LLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKG 406
Query: 87 LNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQW 146
+ S + S + + +LF PF K+++ +TN+ I + + + VHVID QW
Sbjct: 407 IVS-KPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQW 465
Query: 147 IALIQALSTRPEGPPHLRITGIH-PQK-----EVLDQMAHRLTEEAEKLDIPFQFNSVVS 200
LI S G P +RITGI PQ + +++ RL A+ +PF++ ++
Sbjct: 466 PTLIHRFSMY--GSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAK 523
Query: 201 KLENLDFDKLRVKTGEALAISSVLQLHSL 229
K + + + L + E ++ + + +L
Sbjct: 524 KWDAIQLEDLDIDRDEITVVNCLYRAENL 552
Score = 203 (76.5 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 47/149 (31%), Positives = 79/149 (53%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK 332
D+ LN + ++P + V + +N + R EAL+ ++++FD LE+ V R ER+
Sbjct: 564 DTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMF 623
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY 392
+E +FG E N+IACEG+ER ER E ++W R + VP M + + ++
Sbjct: 624 LEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTF 683
Query: 393 NCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
+ I +DNR +L W R + ++S W
Sbjct: 684 YHKDFVIDQDNRWLLQGWKGRTVMALSVW 712
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 247 (92.0 bits), Expect = 4.6e-30, Sum P(2) = 4.6e-30
Identities = 69/225 (30%), Positives = 121/225 (53%)
Query: 14 ELKSEE-RGLYLIHLLLSCANHV--ANGSLENANLALDQISQLASP-DGDTMQRIAAYFT 69
E K++E +GL L+HLL++ A+ AN S E + L ++ L SP D M+R+AA+FT
Sbjct: 93 EPKTDESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFT 152
Query: 70 EALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEG 129
L+ ++L+ L + + ++ + +L +M P++ ++ QAI+EA++
Sbjct: 153 NGLS-KLLERDSVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKY 211
Query: 130 EKVVHVIDLNAAEPAQWIALIQALSTRPEGPP--HLRITGI----HPQKEV--LDQMAHR 181
E+ +H++D + E QW +L+QAL +R GP HLRIT + + +K V + + R
Sbjct: 212 ERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRR 271
Query: 182 LTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQL 226
LT A+ + PF + L++ GEA+ I+ +L L
Sbjct: 272 LTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVINCMLHL 316
Score = 148 (57.2 bits), Expect = 4.6e-30, Sum P(2) = 4.6e-30
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 274 SFLNSLWGLSPKVMVVTEQDSNHNGLT-LMERLLEALYSYAALFDCLESSVSRTSMERLK 332
SFL+ L+PK++ + ++ G + R ++ L+ ++A+FD LE+ +S + R
Sbjct: 329 SFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGF 388
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY 392
VE++ G + N + E E W Q + F + +S+ QA+ LL +
Sbjct: 389 VERVFIGPWVANWLTRITANDAEV-ESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLF 447
Query: 393 NCDGYRIAEDNRCVLIC-WHDRPLFSVSAW-SCR 424
N DG+R+ E + L+ W R L S S W SC+
Sbjct: 448 N-DGFRVEELGQNGLVLGWKSRRLVSASFWASCQ 480
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 220 (82.5 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 52/149 (34%), Positives = 80/149 (53%)
Query: 273 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK 332
D L + GL P+V+ + EQ+ N N + R+ E+ Y AL + +ES+V T+ +R K
Sbjct: 493 DELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAK 552
Query: 333 VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY 392
VE+ + G ++ N +ACEG +R ER E KW R +A F +PLS + ++ + +
Sbjct: 553 VEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSE-KIAESMKSRGNR 610
Query: 393 NCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
G+ + EDN V W R L SAW
Sbjct: 611 VHPGFTVKEDNGGVCFGWMGRALTVASAW 639
Score = 124 (48.7 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 47/193 (24%), Positives = 86/193 (44%)
Query: 28 LLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKAL 87
++ A +A G E A L ++SQ + + ++ +++ + AL RI L+
Sbjct: 269 VMEIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRIASPVTELYG-- 326
Query: 88 NSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAME----GEKVVHVIDLNAAEP 143
E ++ +L +++ P K+ F N AI++A + G + HVID + E
Sbjct: 327 --------KEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIGEG 378
Query: 144 AQWIALIQALSTRPEGP------PHLRITGIHPQ----------KEVLDQMAHRLTEEAE 187
Q++ L++ LSTR G P ++IT + +E L + L++ +
Sbjct: 379 GQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGD 438
Query: 188 KLDIPFQFNSVVS 200
+L I FN V S
Sbjct: 439 RLGISVSFNVVTS 451
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 148 (57.2 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 40/145 (27%), Positives = 72/145 (49%)
Query: 282 LSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLES-SVSRTSMERLKVEKMLFGE 340
LSP ++V +++ L ++L +L+S+ ALF+ L++ + + +M+ K+E+ L
Sbjct: 418 LSPTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQ--KIERFLIQP 475
Query: 341 EIKNIIACEGFERKERHEK-LEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRI 399
EI+ ++ +R E+ + W F F V S QA L+Q G+ +
Sbjct: 476 EIEKLV----LDRSRPIERPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHV 531
Query: 400 AEDNRCVLICWHDRPLFSVSAWSCR 424
+ + +L+CW L VSAW CR
Sbjct: 532 EKKHNSLLLCWQRTELVGVSAWRCR 556
Score = 141 (54.7 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 47/149 (31%), Positives = 70/149 (46%)
Query: 52 QLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPF 111
QL+SP G ++R A YF EAL LH + S+ ++ K F ++ P
Sbjct: 233 QLSSPVGKPLERAAFYFKEALNNL-------LHNVSQTLNPYSLIFKIAAYKSFSEISPV 285
Query: 112 LKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPP-HLRITGI-- 168
L+ A +NQA++E+ G +H+ID + QW +L+Q L R P L+IT
Sbjct: 286 LQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLMQELVLRDNAAPLSLKITVFAS 345
Query: 169 ---HPQKEV---LDQMAHRLTEEAEKLDI 191
H Q E+ D + H +E LDI
Sbjct: 346 PANHDQLELGFTQDNLKHFASEINISLDI 374
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 158 (60.7 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 57/210 (27%), Positives = 101/210 (48%)
Query: 21 GLYLIHLLLSCANHVANGSLENANLALDQISQ-LASPDGDTMQRIAAYFTEALAQRILKS 79
G I L+ + V + L+ A + L +++Q L SP G +QR A YF EAL +
Sbjct: 119 GFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLT-- 176
Query: 80 WPGLHKALNSTRISSVSEEML-VR--KLFFDMFPFLKVAFVLTNQAIIEAMEGEK---VV 133
G ++ N R+SS SE + +R K + + P + NQAI++++ + V
Sbjct: 177 --GSNR--NPIRLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFV 232
Query: 134 HVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQ--MAHRLTEEAEKLDI 191
HV+D Q+ +L++ ++ + LR+T + ++ ++ + LT+ A ++ I
Sbjct: 233 HVVDFEIGFGGQYASLMREITEKSVSGGFLRVTAVVAEECAVETRLVKENLTQFAAEMKI 292
Query: 192 PFQFNSVVSK-LENLDFDKLRVKTGEALAI 220
FQ V+ K E L F +R GE +
Sbjct: 293 RFQIEFVLMKTFEMLSFKAIRFVEGERTVV 322
Score = 125 (49.1 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 39/150 (26%), Positives = 68/150 (45%)
Query: 275 FLNSLWGLSPKVMVVTEQD--SNHNGLTLMER-LLEALYSYAALFDCLESSVSRTSMERL 331
F+N+L +SPKV+V + + + G R + AL Y + + L+++ + +
Sbjct: 338 FVNNLRRVSPKVVVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKK 397
Query: 332 KVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQS 391
VE + +I + +R RH W + F A + LS QA LL+
Sbjct: 398 IVEAFVLRPKISAAVETAA-DR--RHTGEMTWREAFCAAGMRPIQLSQFADFQAECLLEK 454
Query: 392 YNCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
G+ +A+ +++CWH R L + SAW
Sbjct: 455 AQVRGFHVAKRQGELVLCWHGRALVATSAW 484
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 136 (52.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 56/199 (28%), Positives = 88/199 (44%)
Query: 3 PSLGSPYQWLRELKSEERGLYLIHLLLSCANHVA-NGSLENANLA---LDQISQ-LASPD 57
P L P + +++ +I L S A + NG N LA L +++ L + +
Sbjct: 222 PFLTPPKIAGEDQNDQDQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNNNN 281
Query: 58 GDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRIS--SVS--EEMLVR----KLFFDMF 109
DT F A A I ++ LH L + +S S+S + ++ R + F +
Sbjct: 282 DDTNNNPKPPFHRA-ASYITEA---LHSLLQDSSLSPPSLSPPQNLIFRIAAYRAFSETS 337
Query: 110 PFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALS---TRPEGPPHLRIT 166
PFL+ NQ I+E+ EG +H++D + QW +LIQ L+ R P L+IT
Sbjct: 338 PFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKIT 397
Query: 167 GIHPQKEVLDQMAHRLTEE 185
V D+ R TEE
Sbjct: 398 AFASPSTVSDEFELRFTEE 416
Score = 120 (47.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 37/152 (24%), Positives = 64/152 (42%)
Query: 276 LNSLWGLSPKVMVVTEQDSNHNG-LTLMERLLEALYSYAALFDCLESSVSRTSMERLKVE 334
L L +SP V+V +++ + N ++ AL Y +L + L+S + +E
Sbjct: 476 LRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAATSIE 535
Query: 335 KMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNC 394
+ I+ ++ R E+ W F F V LS QA LLQ
Sbjct: 536 RFCVQPSIQKLLT----NRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPM 591
Query: 395 DGYRIAE---DNRCVLICWHDRPLFSVSAWSC 423
G+ + + + +++CW + L +VSAW C
Sbjct: 592 RGFHLEKRQSSSPSLVLCWQRKELVTVSAWKC 623
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 139 (54.0 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 52/208 (25%), Positives = 96/208 (46%)
Query: 21 GLYLIHLLLSCANHVANGSLENANLALDQISQ-LASPDGDTMQRIAAYFTEALAQRILKS 79
G I L+ + + + L A++ L Q++Q L + G +QR A YF EAL +
Sbjct: 96 GFDYIEDLIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLT-- 153
Query: 80 WPGLHK-ALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEK---VVHV 135
G ++ L S S + +++ K F + P + NQAI++++ + VHV
Sbjct: 154 --GTNRNQLFSW--SDIVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHV 209
Query: 136 IDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQ--MAHRLTEEAEKLDIPF 193
+D Q+ +L++ ++ + LR+T + + ++ + LT+ A ++ I F
Sbjct: 210 VDFEIGFGGQYASLMREIAEKSANGGFLRVTAVVAEDCAVETRLVKENLTQFAAEMKIRF 269
Query: 194 QFNSVVSK-LENLDFDKLRVKTGEALAI 220
Q V+ K E L F +R GE +
Sbjct: 270 QIEFVLMKTFEILSFKAIRFVDGERTVV 297
Score = 109 (43.4 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 36/150 (24%), Positives = 64/150 (42%)
Query: 275 FLNSLWGLSPKVMVVTEQD--SNHNGLTLMER-LLEALYSYAALFDCLESSVSRTSMERL 331
F+N+L +SP V+V + + + G R + A Y + + L+++ + +
Sbjct: 313 FVNNLGRVSPNVVVFVDSEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKK 372
Query: 332 KVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQS 391
VE L +I + R+ + W + A V LS QA LL+
Sbjct: 373 IVETFLLRPKISAAVETAA-NRRSAGQMT--WREMLCAAGMRPVQLSQFADFQAECLLEK 429
Query: 392 YNCDGYRIAEDNRCVLICWHDRPLFSVSAW 421
G+ +A+ +++CWH R L + SAW
Sbjct: 430 AQVRGFHVAKRQGELVLCWHGRALVATSAW 459
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 64/221 (28%), Positives = 99/221 (44%)
Query: 35 VANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRIL-KSWPGLHKALNST-RI 92
+A G L N L+ S SP QR A++ EAL I +S P L N RI
Sbjct: 292 LAQGILARLNHHLNTSSNHKSP----FQRAASHIAEALLSLIHNESSPPLITPENLILRI 347
Query: 93 SSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAME--GEKVVHVIDLNAAEPAQWIALI 150
++ + F + PFL+ NQ+I+E+ G +H+ID + QW +L+
Sbjct: 348 AAY-------RSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLM 400
Query: 151 QALSTRPEGPPHLRITGIH------PQKEVLDQMAHRLTEE-----AEKLDIPFQFNSV- 198
Q L++ G R + + P V D+ R TEE A ++ IPF+ +
Sbjct: 401 QELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLS 460
Query: 199 VSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLI 239
V L N + L +++ E AI+ L ++S+ A Y LI
Sbjct: 461 VELLLNPAYWPLSLRSSEKEAIAVNLPVNSV--ASGYLPLI 499
Score = 119 (46.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 36/150 (24%), Positives = 69/150 (46%)
Query: 276 LNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSR--TSMERLKV 333
L L LSP ++V +++ + N ++ +L + +L + L+++ ++ +S+ER V
Sbjct: 500 LRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDANQNQDDSSIERFWV 559
Query: 334 EKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYN 393
+ I+ ++ +R E+ W F F LS QA LLQ
Sbjct: 560 QP-----SIEKLL----MKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQAECLLQRNP 610
Query: 394 CDGYRIAEDNRCVLICWHDRPLFSVSAWSC 423
G+ + + +++CW + L +VSAW C
Sbjct: 611 VRGFHVEKRQSSLVMCWQRKELVTVSAWKC 640
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 72/305 (23%), Positives = 131/305 (42%)
Query: 23 YLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPG 82
++ LLL CA + + + L ++ +A PDGD+ QR+ + F AL R + P
Sbjct: 26 FMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPT 85
Query: 83 LHKALNSTRISSVSEEMLVRKL--FFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNA 140
L ++ + V +L F D+ P+ + F+ N AI+ A+EG VH++DL+
Sbjct: 86 LSSTISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSL 145
Query: 141 AEPAQWIALIQALSTR-PEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVV 199
Q LI A+++R + PP L++T + D + E+L N
Sbjct: 146 THCMQIPTLIDAMASRLNKPPPLLKLTVVSSS----DHFPPFINISYEELGSKL-VNFAT 200
Query: 200 SKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXX 259
++ N+ + V + + SS+LQ + Y S + +L+ N +
Sbjct: 201 TR--NITMEFTIVPSTYSDGFSSLLQQLRI-----YPS--SFNEALVVNCH---MMLRYI 248
Query: 260 XXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCL 319
+ FL L L+P+++ + E+D + L+ RL A + FD
Sbjct: 249 PEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTT 308
Query: 320 ESSVS 324
++ +S
Sbjct: 309 DTFMS 313
Score = 144 (55.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 38/148 (25%), Positives = 72/148 (48%)
Query: 275 FLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVE 334
FL L L+P+++ + E+D + L+ RL A + FD ++ +S +R E
Sbjct: 264 FLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFMSE---QRRWYE 320
Query: 335 KMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNC 394
+ +I+N++A EG ER ER E +WI+R A FG V + + + +L+ +
Sbjct: 321 AEI-SWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAV 379
Query: 395 D-GYRIAEDNRCVLICWHDRPLFSVSAW 421
G + +D+ +++ W + + W
Sbjct: 380 GWGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 151 (58.2 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 47/161 (29%), Positives = 78/161 (48%)
Query: 19 ERGLYLIHLLLSCANHVANGSLENANLALDQISQLASPDGDTMQRIAAYFTEALAQRILK 78
+ G + LL CA + + L +S+LAS GD +R+AA+ AL +
Sbjct: 140 KEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSS 199
Query: 79 S------WPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAM----E 128
S WP A S + + +L F+++ P+ + + N AI++ + +
Sbjct: 200 SSVSSSFWPVFTFA--SAEVKMFQKTLLK---FYEVSPWFALPNNMANSAILQILAQDPK 254
Query: 129 GEKVVHVIDLNAAEPAQWIALIQALSTRPEGPP-HLRITGI 168
+K +H+ID+ + QW L++ALS R EGPP +RIT I
Sbjct: 255 DKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVI 295
Score = 56 (24.8 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 32/147 (21%), Positives = 58/147 (39%)
Query: 276 LNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEK 335
L ++ L PK +V+ E + + Y F L+S+ S E + K
Sbjct: 370 LKAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKF--LDSTSSGFKEENSEERK 427
Query: 336 MLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCD 395
++ GE K ++ G + +E EKW +R A F + A+ LL+ Y+ +
Sbjct: 428 LMEGEATK-VLMNAG----DMNEGKEKWYERMREAGFFVEAFEEDAVDGAKSLLRKYDNN 482
Query: 396 G-YRIAEDNRCVLICWHDRPLFSVSAW 421
R+ + + + W + S W
Sbjct: 483 WEIRMEDGDTFAGLMWKGEAVSFCSLW 509
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 120 (47.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 352 ERKERHEKLEKWIQRFDLACFGNVPLS-YCGMLQARRLLQSYNCDGYRIAEDNRCVLICW 410
ER ERHE L KW RF +A F PLS Y + + L++ Y+ + Y + E + +L+ W
Sbjct: 2 ERVERHELLGKWKLRFTMAGFHQYPLSSYVNSV-IKSLMRCYS-EHYTLVEKDGAMLLGW 59
Query: 411 HDRPLFSVSAW 421
R L S SAW
Sbjct: 60 KKRNLISASAW 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 425 408 0.00079 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 626 (67 KB)
Total size of DFA: 267 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.40u 0.10s 32.50t Elapsed: 00:00:01
Total cpu time: 32.41u 0.10s 32.51t Elapsed: 00:00:01
Start: Tue May 21 09:33:48 2013 End: Tue May 21 09:33:49 2013