Query 014417
Match_columns 425
No_of_seqs 202 out of 761
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 11:12:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 96.5 0.034 1.2E-06 49.5 12.5 51 227-302 73-123 (200)
2 4hf7_A Putative acylhydrolase; 74.7 1.4 4.9E-05 39.2 2.5 30 270-302 101-130 (209)
3 1yzf_A Lipase/acylhydrolase; s 73.1 13 0.00045 31.4 8.3 50 228-302 67-116 (195)
4 3hp4_A GDSL-esterase; psychrot 61.8 2.6 8.8E-05 36.1 1.3 46 228-298 66-111 (185)
5 3rjt_A Lipolytic protein G-D-S 55.4 4.7 0.00016 35.0 1.9 26 269-297 112-137 (216)
6 3dci_A Arylesterase; SGNH_hydr 55.0 1.1E+02 0.0038 26.9 11.6 33 269-301 122-158 (232)
7 1ivn_A Thioesterase I; hydrola 50.9 5.2 0.00018 34.5 1.3 27 269-298 81-107 (190)
8 3mil_A Isoamyl acetate-hydroly 46.2 6 0.0002 35.1 1.0 55 227-302 71-125 (240)
9 1yzf_A Lipase/acylhydrolase; s 46.0 6.5 0.00022 33.4 1.2 13 133-145 2-14 (195)
10 3p94_A GDSL-like lipase; serin 43.2 8.1 0.00028 33.3 1.4 31 269-302 96-126 (204)
11 2q0q_A ARYL esterase; SGNH hyd 43.1 7.6 0.00026 33.9 1.2 32 269-300 104-141 (216)
12 3dci_A Arylesterase; SGNH_hydr 40.2 8.9 0.0003 34.4 1.2 13 133-145 24-36 (232)
13 2hsj_A Putative platelet activ 38.6 12 0.00042 32.5 1.9 14 131-144 33-46 (214)
14 1vcc_A DNA topoisomerase I; DN 37.3 4.6 0.00016 30.6 -1.0 15 133-147 55-70 (77)
15 1vjg_A Putative lipase from th 37.1 9.5 0.00033 33.5 0.8 29 269-301 112-140 (218)
16 3dc7_A Putative uncharacterize 35.6 12 0.00042 33.1 1.4 50 355-414 174-225 (232)
17 1fxw_F Alpha2, platelet-activa 34.9 15 0.00052 32.7 1.9 105 269-411 111-215 (229)
18 1es9_A PAF-AH, platelet-activa 34.8 15 0.00053 32.6 1.9 33 269-302 110-142 (232)
19 3skv_A SSFX3; jelly roll, GDSL 34.1 1.2E+02 0.0042 29.8 8.6 30 270-300 264-293 (385)
20 2w9x_A AXE2A, CJCE2B, putative 33.7 1.2E+02 0.0043 29.1 8.5 28 269-297 266-293 (366)
21 3bzw_A Putative lipase; protei 33.0 15 0.00053 33.8 1.6 27 271-298 142-168 (274)
22 1fll_X B-cell surface antigen 32.4 14 0.00049 22.1 0.8 10 387-396 7-16 (26)
23 1fxw_F Alpha2, platelet-activa 31.4 2.6E+02 0.0088 24.3 11.3 23 124-146 29-53 (229)
24 2vpt_A Lipolytic enzyme; ester 30.5 18 0.00062 31.8 1.6 13 133-145 6-18 (215)
25 3p94_A GDSL-like lipase; serin 30.0 1.5E+02 0.005 24.9 7.5 17 133-149 23-39 (204)
26 1es9_A PAF-AH, platelet-activa 26.8 3.1E+02 0.011 23.7 10.9 16 131-146 37-52 (232)
27 2w9x_A AXE2A, CJCE2B, putative 26.4 25 0.00086 34.2 1.9 15 131-145 141-155 (366)
28 2waa_A Acetyl esterase, xylan 25.2 22 0.00076 34.3 1.2 28 269-297 245-272 (347)
29 2wao_A Endoglucanase E; plant 24.3 24 0.00084 33.8 1.3 28 269-297 233-260 (341)
30 1k7c_A Rhamnogalacturonan acet 24.3 24 0.00083 31.7 1.3 28 271-301 109-136 (233)
31 2o14_A Hypothetical protein YX 20.4 38 0.0013 33.2 1.8 27 269-298 251-277 (375)
32 2jy0_A Protease NS2-3; membran 20.1 50 0.0017 20.2 1.6 14 25-38 12-25 (27)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=96.47 E-value=0.034 Score=49.45 Aligned_cols=51 Identities=16% Similarity=0.269 Sum_probs=35.7
Q ss_pred CCccEEEEcccccccccceeeeCCceeccccCCCCCcccccHHHHHHHHHHHHHHHHHhcCCCCcEEEEeecCCCC
Q 014417 227 ENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSH 302 (425)
Q Consensus 227 ~~~DvlV~ntG~Ww~r~~~~~~~g~~~g~~~~~~~~~~~~~~~~Ayr~al~t~~~wv~~~~~~~t~VffRt~SP~H 302 (425)
..+|+|||+.|..=. . ...+.|+..++++++.++.. .++++++|-+..|..
T Consensus 73 ~~pd~Vvi~~G~ND~----------~--------------~~~~~~~~~l~~ii~~l~~~-~p~~~ii~~~~~P~~ 123 (200)
T 4h08_A 73 TKFDVIHFNNGLHGF----------D--------------YTEEEYDKSFPKLIKIIRKY-APKAKLIWANTTPVR 123 (200)
T ss_dssp SCCSEEEECCCSSCT----------T--------------SCHHHHHHHHHHHHHHHHHH-CTTCEEEEECCCCCE
T ss_pred CCCCeEEEEeeeCCC----------C--------------CCHHHHHHHHHHHHHHHhhh-CCCccEEEeccCCCc
Confidence 468999999985410 0 12467888888888877543 456788998888865
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=74.66 E-value=1.4 Score=39.21 Aligned_cols=30 Identities=10% Similarity=-0.056 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEeecCCCC
Q 014417 270 HAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSH 302 (425)
Q Consensus 270 ~Ayr~al~t~~~wv~~~~~~~t~VffRt~SP~H 302 (425)
+.+...++++++.+. .++++|++-|..|..
T Consensus 101 ~~~~~~l~~ii~~~~---~~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 101 DYTFGNIASMAELAK---ANKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHHHHH---HTTCEEEEECCCCCS
T ss_pred HHHHHHHHHhhHHHh---ccCceEEEEeeeccC
Confidence 455556666665443 356789999988864
No 3
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=73.06 E-value=13 Score=31.42 Aligned_cols=50 Identities=16% Similarity=0.067 Sum_probs=30.9
Q ss_pred CccEEEEcccccccccceeeeCCceeccccCCCCCcccccHHHHHHHHHHHHHHHHHhcCCCCcEEEEeecCCCC
Q 014417 228 NFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSH 302 (425)
Q Consensus 228 ~~DvlV~ntG~Ww~r~~~~~~~g~~~g~~~~~~~~~~~~~~~~Ayr~al~t~~~wv~~~~~~~t~VffRt~SP~H 302 (425)
.+|+|||..|.-=. ..+.. ...+.|+..++.+++.+. ..+|++-+..|..
T Consensus 67 ~pd~vvi~~G~ND~-----~~~~~---------------~~~~~~~~~l~~~i~~~~-----~~~vi~~~~~p~~ 116 (195)
T 1yzf_A 67 KPDEVVIFFGANDA-----SLDRN---------------ITVATFRENLETMIHEIG-----SEKVILITPPYAD 116 (195)
T ss_dssp CCSEEEEECCTTTT-----CTTSC---------------CCHHHHHHHHHHHHHHHC-----GGGEEEECCCCCC
T ss_pred CCCEEEEEeecccc-----CccCC---------------CCHHHHHHHHHHHHHHhc-----CCEEEEEcCCCCc
Confidence 58999999885311 10000 124667777777777554 5668887777653
No 4
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=61.84 E-value=2.6 Score=36.11 Aligned_cols=46 Identities=15% Similarity=0.095 Sum_probs=28.7
Q ss_pred CccEEEEcccccccccceeeeCCceeccccCCCCCcccccHHHHHHHHHHHHHHHHHhcCCCCcEEEEeec
Q 014417 228 NFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTF 298 (425)
Q Consensus 228 ~~DvlV~ntG~Ww~r~~~~~~~g~~~g~~~~~~~~~~~~~~~~Ayr~al~t~~~wv~~~~~~~t~VffRt~ 298 (425)
.+|+|||..|.- .... + ...+.|+..++.+++.+... ..+|++-++
T Consensus 66 ~pd~vvi~~G~N-----D~~~-~----------------~~~~~~~~~~~~~i~~~~~~---~~~vvl~~~ 111 (185)
T 3hp4_A 66 EPTHVLIELGAN-----DGLR-G----------------FPVKKMQTNLTALVKKSQAA---NAMTALMEI 111 (185)
T ss_dssp CCSEEEEECCHH-----HHHT-T----------------CCHHHHHHHHHHHHHHHHHT---TCEEEEECC
T ss_pred CCCEEEEEeecc-----cCCC-C----------------cCHHHHHHHHHHHHHHHHHc---CCeEEEEeC
Confidence 589999999843 1110 0 11367888888888877543 456666554
No 5
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=55.40 E-value=4.7 Score=34.96 Aligned_cols=26 Identities=23% Similarity=0.238 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEee
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRT 297 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt 297 (425)
.+.|+..++.+++.+... +.+|++-+
T Consensus 112 ~~~~~~~l~~~i~~~~~~---~~~vil~~ 137 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPR---VREMFLLS 137 (216)
T ss_dssp HHHHHHHHHHHHHHHGGG---SSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhc---CCeEEEEC
Confidence 577888888888877543 56777766
No 6
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=55.00 E-value=1.1e+02 Score=26.87 Aligned_cols=33 Identities=9% Similarity=0.022 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHhcC----CCCcEEEEeecCCC
Q 014417 269 YHAYRMAFRTAFRTLQRLK----NYKGITFLRTFSPS 301 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~----~~~t~VffRt~SP~ 301 (425)
.+.|+..++++++.+.... .++++|++-+..|.
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~ 158 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPC 158 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCc
Confidence 4678888888888776432 15677887775543
No 7
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=50.85 E-value=5.2 Score=34.48 Aligned_cols=27 Identities=7% Similarity=0.137 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEeec
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRTF 298 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt~ 298 (425)
.+.|+..++.+++.+... +.+|++-+.
T Consensus 81 ~~~~~~~l~~li~~~~~~---~~~vil~~~ 107 (190)
T 1ivn_A 81 PQQTEQTLRQILQDVKAA---NAEPLLMQI 107 (190)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHc---CCCEEEEec
Confidence 466788888887777543 356776664
No 8
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=46.17 E-value=6 Score=35.06 Aligned_cols=55 Identities=9% Similarity=-0.049 Sum_probs=32.8
Q ss_pred CCccEEEEcccccccccceeeeCCceeccccCCCCCcccccHHHHHHHHHHHHHHHHHhcCCCCcEEEEeecCCCC
Q 014417 227 ENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSH 302 (425)
Q Consensus 227 ~~~DvlV~ntG~Ww~r~~~~~~~g~~~g~~~~~~~~~~~~~~~~Ayr~al~t~~~wv~~~~~~~t~VffRt~SP~H 302 (425)
..+|+|||..|.-=.. . .+ ... .-.+.|+..++.+++.+... +.+|++-+..|..
T Consensus 71 ~~pd~vvi~~G~ND~~----~-~~------------~~~-~~~~~~~~~l~~~i~~~~~~---~~~vil~~~~p~~ 125 (240)
T 3mil_A 71 SNIVMATIFLGANDAC----S-AG------------PQS-VPLPEFIDNIRQMVSLMKSY---HIRPIIIGPGLVD 125 (240)
T ss_dssp CCEEEEEEECCTTTTS----S-SS------------TTC-CCHHHHHHHHHHHHHHHHHT---TCEEEEECCCCCC
T ss_pred CCCCEEEEEeecCcCC----c-cC------------CCC-CCHHHHHHHHHHHHHHHHHc---CCeEEEEcCCCCC
Confidence 4699999999852110 0 00 001 12467888888887776543 3578887766543
No 9
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=46.00 E-value=6.5 Score=33.40 Aligned_cols=13 Identities=23% Similarity=0.593 Sum_probs=11.6
Q ss_pred CeEEEEechhhHH
Q 014417 133 KSLAFVGDSVGRN 145 (425)
Q Consensus 133 K~l~FVGDSl~Rn 145 (425)
|+|+|+|||++..
T Consensus 2 ~~i~~~GDS~t~g 14 (195)
T 1yzf_A 2 RKIVLFGDSITAG 14 (195)
T ss_dssp EEEEEEESHHHHC
T ss_pred CeEEEEccccccC
Confidence 5899999999976
No 10
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=43.18 E-value=8.1 Score=33.25 Aligned_cols=31 Identities=3% Similarity=-0.119 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEeecCCCC
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSH 302 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt~SP~H 302 (425)
.+.|+..++.+++.+.. ++.+|++-+..|..
T Consensus 96 ~~~~~~~~~~~i~~~~~---~~~~vil~~~~p~~ 126 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA---NHIKVIFCSVLPAY 126 (204)
T ss_dssp HHHHHHHHHHHHHHHHH---TTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHHHHHh---CCCeEEEEeCCCCC
Confidence 46677778877776653 46678888887754
No 11
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=43.13 E-value=7.6 Score=33.87 Aligned_cols=32 Identities=3% Similarity=-0.068 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHhcC------CCCcEEEEeecCC
Q 014417 269 YHAYRMAFRTAFRTLQRLK------NYKGITFLRTFSP 300 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~------~~~t~VffRt~SP 300 (425)
.+.|+..++.+++.+.... .++++|++-+..|
T Consensus 104 ~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~ 141 (216)
T 2q0q_A 104 PLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCC
Confidence 4678888888888776432 0456777776543
No 12
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=40.23 E-value=8.9 Score=34.35 Aligned_cols=13 Identities=31% Similarity=0.414 Sum_probs=11.2
Q ss_pred CeEEEEechhhHH
Q 014417 133 KSLAFVGDSVGRN 145 (425)
Q Consensus 133 K~l~FVGDSl~Rn 145 (425)
|+|+|+|||++..
T Consensus 24 ~~I~~lGDSit~G 36 (232)
T 3dci_A 24 KTVLAFGDSLTWG 36 (232)
T ss_dssp EEEEEEESHHHHT
T ss_pred CEEEEEECccccC
Confidence 6899999999853
No 13
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=38.63 E-value=12 Score=32.46 Aligned_cols=14 Identities=29% Similarity=0.546 Sum_probs=0.0
Q ss_pred cCCeEEEEechhhH
Q 014417 131 RGKSLAFVGDSVGR 144 (425)
Q Consensus 131 rgK~l~FVGDSl~R 144 (425)
...+|+|+|||++.
T Consensus 33 ~~~~i~~~GDSit~ 46 (214)
T 2hsj_A 33 VEPNILFIGDSIVE 46 (214)
T ss_dssp SCCSEEEEESHHHH
T ss_pred ccCCEEEEecchhc
No 14
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=37.31 E-value=4.6 Score=30.62 Aligned_cols=15 Identities=60% Similarity=0.875 Sum_probs=12.3
Q ss_pred CeEEEEe-chhhHHHH
Q 014417 133 KSLAFVG-DSVGRNQM 147 (425)
Q Consensus 133 K~l~FVG-DSl~Rn~~ 147 (425)
.+++||| ||-+|.||
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 3599999 89888776
No 15
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=37.06 E-value=9.5 Score=33.53 Aligned_cols=29 Identities=10% Similarity=0.039 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEeecCCC
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPS 301 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt~SP~ 301 (425)
.+.|+..++.+++.+... ++|++-+..|.
T Consensus 112 ~~~~~~~l~~li~~l~~~----~~iil~~~~p~ 140 (218)
T 1vjg_A 112 IAETIKNTREILTQAKKL----YPVLMISPAPY 140 (218)
T ss_dssp HHHHHHHHHHHHHHHHHH----SCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHh----CcEEEECCCCc
Confidence 466788888887777543 56888777654
No 16
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=35.63 E-value=12 Score=33.12 Aligned_cols=50 Identities=14% Similarity=-0.027 Sum_probs=27.4
Q ss_pred cEEEeecccccccCCC--CCCCCCCCCCCCCCCCCCccccccCChhhHHHHHHHHHHHhhhh
Q 014417 355 KFSLLDTTEIMLLRPD--GHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYMLKIERQ 414 (425)
Q Consensus 355 ~v~lLDIT~lS~~R~D--~HPs~y~~~~~~~~~~~DC~HWCLPGvpDtWNelL~~~L~~~~~ 414 (425)
.+.++|+...+...+. .++..|. .|.+|.=--| -..|-+.|+..|..+.+
T Consensus 174 ~v~~iD~~~~~~~~~~~~~~~~~~~---------~DgvHpn~~G-~~~iA~~i~~~l~~~~~ 225 (232)
T 3dc7_A 174 GVPHLSLYRDAGMTFAIPAQAAIYS---------VDTLHPNNAG-HRVIARKLQSFLDSHFL 225 (232)
T ss_dssp TCCEEEHHHHSSCCTTSHHHHHHHB---------SSSSSBCHHH-HHHHHHHHHHHHHHHCG
T ss_pred CCcEEecccccCCCccchhhhhhcc---------CCCCCCCHHH-HHHHHHHHHHHHHHHHH
Confidence 5888999887543321 1111111 5777654433 35667777776665443
No 17
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=34.93 E-value=15 Score=32.67 Aligned_cols=105 Identities=12% Similarity=0.058 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEeecCCCCCCCCCCCCCCCCCccccCCCCccccCCcchHHHHHHHHHHHHHHHh
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQ 348 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt~SP~Hf~~g~W~~gg~C~~t~P~~~~~~~~~~~~~~~~~i~~eef~~~~~~ 348 (425)
.+.|+..++.+++.+... .++++|++-+..|.... |. .++. ..+++.+++++
T Consensus 111 ~~~~~~~l~~~i~~l~~~-~p~~~iil~~~~p~~~~--------------~~------------~~~~-~~~~~n~~l~~ 162 (229)
T 1fxw_F 111 AEEVAGGIEAIVQLINTR-QPQAKIIVLGLLPRGEK--------------PN------------PLRQ-KNAKVNQLLKV 162 (229)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCEEEEECCCCCSSS--------------CC------------HHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCeEEEEeCCCCCCc--------------hh------------hHHH-HHHHHHHHHHH
Confidence 356777777777776543 34577888777765421 00 0111 12233333333
Q ss_pred ccccCccEEEeecccccccCCCCCCCCCCCCCCCCCCCCCccccccCChhhHHHHHHHHHHHh
Q 014417 349 GMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYMLKI 411 (425)
Q Consensus 349 ~~~~~~~v~lLDIT~lS~~R~D~HPs~y~~~~~~~~~~~DC~HWCLPGvpDtWNelL~~~L~~ 411 (425)
......++.++|+.....- +++.+..+ . ..|-+|----| -..|-+.|+..|..
T Consensus 163 ~a~~~~~v~~iD~~~~~~~-~~g~~~~~-------~-~~DgvHpn~~G-~~~~a~~l~~~l~~ 215 (229)
T 1fxw_F 163 SLPKLANVQLLDTDGGFVH-SDGAISCH-------D-MFDFLHLTGGG-YAKICKPLHELIMQ 215 (229)
T ss_dssp HSSSSSSEEEECCCCSCBC-TTSCBCTT-------T-BTTSSSBCHHH-HHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEeCHHHhhc-cCCCcchh-------h-cCCCCCcCHHH-HHHHHHHHHHHHHH
Confidence 2222467999999875431 22221110 0 15778866544 35566666665544
No 18
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=34.82 E-value=15 Score=32.60 Aligned_cols=33 Identities=3% Similarity=0.001 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEeecCCCC
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSH 302 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt~SP~H 302 (425)
.+.|+..++.+++.+... .++++|++-+..|..
T Consensus 110 ~~~~~~~l~~~i~~l~~~-~p~~~ii~~~~~p~~ 142 (232)
T 1es9_A 110 AEQVTGGIKAIVQLVNER-QPQARVVVLGLLPRG 142 (232)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCeEEEecCCCCC
Confidence 456777777777776543 346788888887743
No 19
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=34.11 E-value=1.2e+02 Score=29.78 Aligned_cols=30 Identities=3% Similarity=-0.050 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEeecCC
Q 014417 270 HAYRMAFRTAFRTLQRLKNYKGITFLRTFSP 300 (425)
Q Consensus 270 ~Ayr~al~t~~~wv~~~~~~~t~VffRt~SP 300 (425)
+.|+..++.+++.++. ..++++|++-+.-|
T Consensus 264 ~~~~~~l~~li~~ir~-~~P~a~Illv~p~~ 293 (385)
T 3skv_A 264 VDFPANLVGFVQIIRE-RHPLTPIVLGSSVY 293 (385)
T ss_dssp TTHHHHHHHHHHHHHT-TCSSSCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHH-HCCCCcEEEEcCCC
Confidence 3466677777666653 23466787777654
No 20
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=33.73 E-value=1.2e+02 Score=29.12 Aligned_cols=28 Identities=14% Similarity=0.141 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEee
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRT 297 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt 297 (425)
.+.|+.+++.+++.++.. .++++|++-+
T Consensus 266 ~~~~~~~l~~li~~ir~~-~p~a~Iil~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSN-NARAQFILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCeEEEEe
Confidence 467888888888877543 3566777666
No 21
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=33.01 E-value=15 Score=33.76 Aligned_cols=27 Identities=22% Similarity=0.181 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEeec
Q 014417 271 AYRMAFRTAFRTLQRLKNYKGITFLRTF 298 (425)
Q Consensus 271 Ayr~al~t~~~wv~~~~~~~t~VffRt~ 298 (425)
.|+..++.+++.+... .++++|++-+.
T Consensus 142 ~~~~~l~~li~~lr~~-~p~a~Iilitp 168 (274)
T 3bzw_A 142 TYRGRINIGITQLKKL-FPDKQIVLLTP 168 (274)
T ss_dssp SHHHHHHHHHHHHHHH-CTTSEEEEECC
T ss_pred HHHHHHHHHHHHHHHH-CCCCeEEEEec
Confidence 4666777777666443 35677888554
No 22
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=32.45 E-value=14 Score=22.15 Aligned_cols=10 Identities=20% Similarity=0.318 Sum_probs=9.0
Q ss_pred CCccccccCC
Q 014417 387 NDCVHWCLPG 396 (425)
Q Consensus 387 ~DC~HWCLPG 396 (425)
+|-+|||+|-
T Consensus 7 qeTl~~~qPV 16 (26)
T 1fll_X 7 QETLHGSQPV 16 (26)
T ss_dssp CCCCCCSSSC
T ss_pred hHHhhcCccc
Confidence 8999999994
No 23
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=31.44 E-value=2.6e+02 Score=24.27 Aligned_cols=23 Identities=26% Similarity=0.343 Sum_probs=16.9
Q ss_pred HHHHHHH--cCCeEEEEechhhHHH
Q 014417 124 VQFLEIV--RGKSLAFVGDSVGRNQ 146 (425)
Q Consensus 124 ~~fl~~L--rgK~l~FVGDSl~Rn~ 146 (425)
..|.+.. ...+|+|+|||++...
T Consensus 29 ~~~~~~~~~~~~~i~~~GDSit~g~ 53 (229)
T 1fxw_F 29 NRFVLDCKDKEPDVLFVGDSMVQLM 53 (229)
T ss_dssp HHHHHHHHHCCCSEEEEESHHHHGG
T ss_pred HHHHHHcccCCCCEEEEecchhcCC
Confidence 3454443 5679999999999764
No 24
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=30.51 E-value=18 Score=31.77 Aligned_cols=13 Identities=31% Similarity=0.332 Sum_probs=11.3
Q ss_pred CeEEEEechhhHH
Q 014417 133 KSLAFVGDSVGRN 145 (425)
Q Consensus 133 K~l~FVGDSl~Rn 145 (425)
.+|+|+|||++..
T Consensus 6 ~~i~~~GDSit~G 18 (215)
T 2vpt_A 6 IKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEESHHHHT
T ss_pred eEEEecccccccC
Confidence 4899999999864
No 25
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=30.05 E-value=1.5e+02 Score=24.89 Aligned_cols=17 Identities=18% Similarity=0.423 Sum_probs=13.3
Q ss_pred CeEEEEechhhHHHHHH
Q 014417 133 KSLAFVGDSVGRNQMES 149 (425)
Q Consensus 133 K~l~FVGDSl~Rn~~eS 149 (425)
++|+|+|||++..+-..
T Consensus 23 ~~i~~~GDSit~g~~~~ 39 (204)
T 3p94_A 23 SNVVFMGNSITDGWWPA 39 (204)
T ss_dssp EEEEEEESHHHHTHHHH
T ss_pred ceEEEEccchhhcccch
Confidence 39999999999764433
No 26
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=26.83 E-value=3.1e+02 Score=23.69 Aligned_cols=16 Identities=25% Similarity=0.480 Sum_probs=13.9
Q ss_pred cCCeEEEEechhhHHH
Q 014417 131 RGKSLAFVGDSVGRNQ 146 (425)
Q Consensus 131 rgK~l~FVGDSl~Rn~ 146 (425)
...+|+|+|||++...
T Consensus 37 ~~~~i~~~GDSit~g~ 52 (232)
T 1es9_A 37 KEPEVVFIGDSLVQLM 52 (232)
T ss_dssp CCCSEEEEESHHHHTH
T ss_pred CCCCEEEEechHhhcc
Confidence 5679999999999884
No 27
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=26.43 E-value=25 Score=34.22 Aligned_cols=15 Identities=33% Similarity=0.674 Sum_probs=12.7
Q ss_pred cCCeEEEEechhhHH
Q 014417 131 RGKSLAFVGDSVGRN 145 (425)
Q Consensus 131 rgK~l~FVGDSl~Rn 145 (425)
..++|+|+|||++-.
T Consensus 141 ~~~~I~~iGDSIT~G 155 (366)
T 2w9x_A 141 RKRQIEFIGDSFTVG 155 (366)
T ss_dssp CCCEEEEEESHHHHT
T ss_pred CCceEEEEecccccc
Confidence 568999999999854
No 28
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=25.18 E-value=22 Score=34.32 Aligned_cols=28 Identities=18% Similarity=0.160 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEee
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRT 297 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt 297 (425)
.+.|+.+++.+++.+... .++++|++-+
T Consensus 245 ~~~~~~~l~~li~~ir~~-~p~~~I~l~~ 272 (347)
T 2waa_A 245 RATYINTYTRFVRTLLDN-HPQATIVLTE 272 (347)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCEEEEEe
Confidence 356777777777766542 3566777754
No 29
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=24.28 E-value=24 Score=33.81 Aligned_cols=28 Identities=11% Similarity=0.144 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEee
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRT 297 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt 297 (425)
.+.|+.+++.+++.+... .++++|++-+
T Consensus 233 ~~~~~~~l~~li~~ir~~-~p~a~Iil~~ 260 (341)
T 2wao_A 233 KTKFVTAYKNLISEVRRN-YPDAHIFCCV 260 (341)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCeEEEEe
Confidence 356777777777776543 3466777776
No 30
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=24.28 E-value=24 Score=31.70 Aligned_cols=28 Identities=11% Similarity=0.199 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEeecCCC
Q 014417 271 AYRMAFRTAFRTLQRLKNYKGITFLRTFSPS 301 (425)
Q Consensus 271 Ayr~al~t~~~wv~~~~~~~t~VffRt~SP~ 301 (425)
.|+..|+.+++-+.. .+.++++-|..|.
T Consensus 109 ~~~~~l~~~i~~~~~---~g~~vil~tp~p~ 136 (233)
T 1k7c_A 109 TFPAYLENAAKLFTA---KGAKVILSSQTPN 136 (233)
T ss_dssp BHHHHHHHHHHHHHH---TTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHH---CCCEEEEECCCCc
Confidence 477777777765542 2356777666554
No 31
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=20.43 E-value=38 Score=33.24 Aligned_cols=27 Identities=15% Similarity=0.167 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEeec
Q 014417 269 YHAYRMAFRTAFRTLQRLKNYKGITFLRTF 298 (425)
Q Consensus 269 ~~Ayr~al~t~~~wv~~~~~~~t~VffRt~ 298 (425)
.+.|+..++.+++.+... +.+|++-+.
T Consensus 251 ~~~~~~~l~~ii~~lr~~---~a~vilvtP 277 (375)
T 2o14_A 251 EAEFKEVMRDMIRQVKAK---GADVILSTP 277 (375)
T ss_dssp HHHHHHHHHHHHHHHHTT---TCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHC---CCEEEEECC
Confidence 466888888888776532 456777663
No 32
>2jy0_A Protease NS2-3; membrane segment, HCV NS2 protein, membrane protein, viral protein; NMR {Synthetic}
Probab=20.11 E-value=50 Score=20.23 Aligned_cols=14 Identities=36% Similarity=0.384 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHhhh
Q 014417 25 LLAIILSLLTVIPL 38 (425)
Q Consensus 25 ~~~~~~~~~~~~~~ 38 (425)
.++++|.++|+.|.
T Consensus 12 ~vlv~lti~TLsP~ 25 (27)
T 2jy0_A 12 AVFVGLVLLTLSPH 25 (27)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhcCcc
Confidence 45667777888775
Done!