BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014418
(425 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93788|REMO_SOLTU Remorin OS=Solanum tuberosum PE=1 SV=1
Length = 198
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 308 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 364
L R+ EKR S AW E+EKSK + +++ I AWE+ +KA LEAE++++E ++E+
Sbjct: 81 LARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKK 140
Query: 365 RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGW 424
+A+ KM KI++ + +EEKRA EA++ D + R TG P G
Sbjct: 141 KAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKK---ILGI 197
Query: 425 F 425
F
Sbjct: 198 F 198
>sp|Q9M2D8|Y3126_ARATH Uncharacterized protein At3g61260 OS=Arabidopsis thaliana
GN=At3g61260 PE=1 SV=1
Length = 212
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 74/124 (59%), Gaps = 12/124 (9%)
Query: 308 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 364
L + EKR S AW E+EKSK + +++ + AWE+ +KA +EA++++IE ++E+
Sbjct: 95 LADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKK 154
Query: 365 RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRD---AERTAAQGEYIRQTGQIPSSHFTC 421
+A+ +M K++ + +EE+RA EA++ D AE TAA+ R TG +P +
Sbjct: 155 KAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAK---YRATGIVPKA---T 208
Query: 422 CGWF 425
CG F
Sbjct: 209 CGCF 212
>sp|O80837|REMO_ARATH Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1
Length = 190
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 295 NTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEM 354
++ SA+++ + +LE+ + AW E+EKSK R +++ + AWE+ +KA +EA++
Sbjct: 63 SSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQL 122
Query: 355 RRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQI 414
R+IE ++E+ +AQ KM K++ + +EEKRA EA+K + + G R TG +
Sbjct: 123 RKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVV 182
Query: 415 PSSHFTCCGWF 425
P + CG F
Sbjct: 183 PKA---TCGCF 190
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 40.4 bits (93), Expect = 0.024, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 300 EKNSDMEELERIEYEKRASAWAEAE-KSKHIARFKREE-IKIQAWESRQKAKLEAEMRRI 357
E+ +E ER+E EK+ E E K + R ++EE +K Q E QK E E++R
Sbjct: 2750 EEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQK---EEELKR- 2805
Query: 358 EAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQ 410
E E++ + Q ++ K+ + RQ +E+ EA K ++ ER + E RQ
Sbjct: 2806 -QEQERLEREKQEQLQKEEELKRQE-QERLQKEEALKRQEQERLQKEEELKRQ 2856
Score = 33.9 bits (76), Expect = 2.7, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 306 EELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIR 365
+E ER+E EK+ E E K + ++ K +A + +++ +L+ E E E++
Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLE 2762
Query: 366 AQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQ 410
+ Q ++ K+ + RQ +E+ EA K ++ ER + E RQ
Sbjct: 2763 REKQEQLQKEEELKRQE-QERLQKEEALKRQEQERLQKEEELKRQ 2806
>sp|Q9KW51|PAS_STRIT Probable cell-surface antigen I/II OS=Streptococcus intermedius
GN=pas PE=3 SV=2
Length = 1310
Score = 32.3 bits (72), Expect = 7.0, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 22/242 (9%)
Query: 186 RSVCMRDMGTEMTPVASQE-PSRTATPVGATTPLRSPTSSIPST--PRGRAPASTPMEQT 242
+++C +G + + Q+ + T +TT + + P+T P + AS EQ+
Sbjct: 17 KTLCGAVLGAALLAMVDQQVAAEETTKSNSTTNVAVTATGNPATNLPEAQGSASKEAEQS 76
Query: 243 ----GIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSS 298
G PVE K DL + + K+ V VQ +N + E +
Sbjct: 77 QNQAGETNGSIPVEVPKTDLDQAAKEAKSAGVNV---VQDADVNKGTVKTAGE------A 127
Query: 299 AEKNSDMEELERIEYEKRASAWAEA--EKSKHIARFKREEIKIQAWESRQKAKLEAEMRR 356
A+K ++++E +Y K+A + + +A + E KI+A K + E +M
Sbjct: 128 AQKETEIKE----DYTKQAEDIKKTTDQYKSDVAAHEAEVAKIKAKNQATKEQYEKDMAA 183
Query: 357 IEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPS 416
+AEVE+I A A + Q E + EA + +A A Y + ++
Sbjct: 184 HKAEVERINAANAASKAAYETKLAQYQAELKRVQEANATNEANYQAKLTAYKTELARVQK 243
Query: 417 SH 418
++
Sbjct: 244 AN 245
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.122 0.344
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,620,034
Number of Sequences: 539616
Number of extensions: 5933321
Number of successful extensions: 33383
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 1368
Number of HSP's that attempted gapping in prelim test: 27809
Number of HSP's gapped (non-prelim): 4978
length of query: 425
length of database: 191,569,459
effective HSP length: 120
effective length of query: 305
effective length of database: 126,815,539
effective search space: 38678739395
effective search space used: 38678739395
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)