Query 014418
Match_columns 425
No_of_seqs 152 out of 231
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 11:13:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014418.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014418hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2d4ca1 a.238.1.1 (A:11-247) E 19.0 2.1E+02 0.015 22.7 9.2 49 328-376 151-199 (237)
2 d1x58a1 a.4.1.1 (A:8-56) Hypot 7.4 43 0.0032 23.1 0.0 10 36-45 29-38 (49)
3 d1gpja1 a.151.1.1 (A:303-404) 6.9 4.2E+02 0.031 19.1 5.9 49 328-378 5-53 (102)
4 d2clyb1 f.53.1.1 (B:4-123) ATP 5.9 2.2E+02 0.016 22.2 3.7 18 348-365 102-119 (120)
5 d1eh1a_ d.67.3.1 (A:) Ribosome 5.6 6.8E+02 0.049 20.2 8.1 53 319-372 118-172 (185)
6 d2azea1 e.63.1.1 (A:199-346) T 5.4 7E+02 0.051 20.1 6.8 30 349-378 6-35 (148)
7 d2c0sa1 a.30.7.1 (A:1-57) Hypo 5.1 4.2E+02 0.03 18.5 4.3 16 353-368 2-17 (57)
8 d1t92a_ d.24.1.3 (A:) Pullulan 4.8 3.8E+02 0.027 20.1 4.4 23 345-367 6-28 (108)
9 d1ugoa_ a.7.7.1 (A:) BAG-famil 4.4 5.7E+02 0.042 19.0 5.2 73 345-417 18-98 (99)
10 d1gqea_ e.38.1.1 (A:) Polypept 4.0 1.1E+03 0.083 20.7 11.1 83 303-386 22-110 (362)
No 1
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.03 E-value=2.1e+02 Score=22.70 Aligned_cols=49 Identities=14% Similarity=0.301 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014418 328 HIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKI 376 (425)
Q Consensus 328 ~~~RykREEakI~AWEN~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKl 376 (425)
....|........++.+.....++.+|+..+.++|..+..+...|.+=+
T Consensus 151 ~rk~~d~~~~~~~~~~~k~~~~~~e~l~~a~~~~e~~~~~~~~~l~~l~ 199 (237)
T d2d4ca1 151 HLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEIAESSMFNLL 199 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555666666666788899999999999988888887643
No 2
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.37 E-value=43 Score=23.06 Aligned_cols=10 Identities=60% Similarity=1.095 Sum_probs=8.6
Q ss_pred cccccccccc
Q 014418 36 SFEFHKGERS 45 (425)
Q Consensus 36 sFEFhk~e~a 45 (425)
||.||+|+++
T Consensus 29 s~PF~~GR~~ 38 (49)
T d1x58a1 29 SFPFQKGRRA 38 (49)
T ss_dssp HSCCCTTCCH
T ss_pred ccCCCCCchh
Confidence 6899998876
No 3
>d1gpja1 a.151.1.1 (A:303-404) Glutamyl tRNA-reductase dimerization domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=6.91 E-value=4.2e+02 Score=19.09 Aligned_cols=49 Identities=8% Similarity=0.118 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014418 328 HIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISM 378 (425)
Q Consensus 328 ~~~RykREEakI~AWEN~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKlA~ 378 (425)
+..=...+-.....|-+ .-++.--|+.+-.++|..|..-++|..++|..
T Consensus 5 AE~II~ee~~~F~~w~~--~~~~~p~I~~lr~~~e~ir~~Elekal~kl~~ 53 (102)
T d1gpja1 5 VEKLIEEELSTVEEELE--KLKERRLVADVAKSLHEIKDRELERALRRLKT 53 (102)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCC
T ss_pred HHHHHHHHHHHHHHHHH--hccchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33445566677777744 44566778888888888888888888887763
No 4
>d2clyb1 f.53.1.1 (B:4-123) ATP synthase subunit d, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.90 E-value=2.2e+02 Score=22.20 Aligned_cols=18 Identities=22% Similarity=0.497 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014418 348 AKLEAEMRRIEAEVEQIR 365 (425)
Q Consensus 348 AKAEA~mrKiE~KLEkkR 365 (425)
...++.|..+|.+||+++
T Consensus 102 ~~s~~rI~~lekeLe~ik 119 (120)
T d2clyb1 102 TQSKTRIQEYEKELEKMR 119 (120)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 344555667777777765
No 5
>d1eh1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermus thermophilus [TaxId: 274]}
Probab=5.65 E-value=6.8e+02 Score=20.20 Aligned_cols=53 Identities=28% Similarity=0.283 Sum_probs=31.2
Q ss_pred hHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014418 319 AWAEAEKSKHIARFKREEI--KIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKM 372 (425)
Q Consensus 319 AWEeaEkaK~~~RykREEa--kI~AWEN~QKAKAEA~mrKiE~KLEkkRA~a~EK~ 372 (425)
+++..|.+|..-|--|.++ +|..++..+ .--|-..+++|.++++.=-.+..++
T Consensus 118 ~k~~~E~akv~iR~iR~~~~~~ikk~~k~~-~iseD~~k~~~~eiq~ltd~~~~~i 172 (185)
T d1eh1a_ 118 VRQYAEEGRVAIRNIRREALDKLKKLAKEL-HLSEDETKRAEAEIQKITDEFIAKA 172 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888888888777654 555554322 1235666666666665544443333
No 6
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.41 E-value=7e+02 Score=20.11 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014418 349 KLEAEMRRIEAEVEQIRAQAQAKMVKKISM 378 (425)
Q Consensus 349 KAEA~mrKiE~KLEkkRA~a~EK~~NKlA~ 378 (425)
+.|++.+++...+++|++.+.|=++..++.
T Consensus 6 ~Le~E~~~~~erI~~K~~~LqeLi~Q~iaf 35 (148)
T d2azea1 6 NLEVERQRRLERIKQKQSQLQELILQQIAF 35 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666667777777776666665544
No 7
>d2c0sa1 a.30.7.1 (A:1-57) Hypothetical protein BAS4809, C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=5.09 E-value=4.2e+02 Score=18.49 Aligned_cols=16 Identities=6% Similarity=0.335 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 014418 353 EMRRIEAEVEQIRAQA 368 (425)
Q Consensus 353 ~mrKiE~KLEkkRA~a 368 (425)
+|++++..+|.||-+.
T Consensus 2 e~~~L~~~IE~KK~eL 17 (57)
T d2c0sa1 2 NVTKLNDRIEAKKKEL 17 (57)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH
Confidence 4778888888777554
No 8
>d1t92a_ d.24.1.3 (A:) Pullulanase secretion protein PulG {Klebsiella pneumoniae [TaxId: 573]}
Probab=4.84 E-value=3.8e+02 Score=20.14 Aligned_cols=23 Identities=9% Similarity=0.320 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 014418 345 RQKAKLEAEMRRIEAEVEQIRAQ 367 (425)
Q Consensus 345 ~QKAKAEA~mrKiE~KLEkkRA~ 367 (425)
-+.++|.++|+.|+.-||.-+..
T Consensus 6 Ak~~~a~~di~~i~~aL~~Y~~d 28 (108)
T d1t92a_ 6 ADRQKVVSDLVALEGALDMYKLD 28 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 45667888899998877766543
No 9
>d1ugoa_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-5, BAG-5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.41 E-value=5.7e+02 Score=19.00 Aligned_cols=73 Identities=18% Similarity=0.203 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCCCC
Q 014418 345 RQKAKLEAEMRRIEAEVEQ--------IRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPS 416 (425)
Q Consensus 345 ~QKAKAEA~mrKiE~KLEk--------kRA~a~EK~~NKlA~a~rkAEekRA~AEAkr~ee~~K~~EkA~kiR~TGk~Ps 416 (425)
.+-.++..++.+|+.+++. ...++.|-|++.|-.+.-+--+-...+...|...+.++..--+++=..+.-|+
T Consensus 18 ~~I~~i~~ev~~L~~~V~~f~~~~~dke~~~L~E~L~~~LlkLD~Ie~~G~~~vR~~RK~~vk~vQ~~l~~LD~ka~~ps 97 (99)
T d1ugoa_ 18 SRLQEIQREVKAIEPQVVGFSGLSDDKNYKRLERILTKQLFEIDSVDTEGKGDIQQARKRAAQETERLLKELEQNASGPS 97 (99)
T ss_dssp HHHHHHHHHHHHSHHHHHTCCCCTTSSHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q ss_pred C
Q 014418 417 S 417 (425)
Q Consensus 417 s 417 (425)
+
T Consensus 98 s 98 (99)
T d1ugoa_ 98 S 98 (99)
T ss_dssp C
T ss_pred C
No 10
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=3.99 E-value=1.1e+03 Score=20.72 Aligned_cols=83 Identities=12% Similarity=0.145 Sum_probs=0.0
Q ss_pred chhHHHHH--HHHHHhhh---hHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014418 303 SDMEELER--IEYEKRAS---AWAEAEKSK-HIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKI 376 (425)
Q Consensus 303 ~~~~e~~k--~~~EsrAa---AWEeaEkaK-~~~RykREEakI~AWEN~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKl 376 (425)
+|++..+. .+++..++ -|...++++ +..+|...+..|..|+.+++.-.+++- -+|.-.+.......+.+...|
T Consensus 22 fDld~kk~Rl~ELE~~lsdP~fW~D~~kAqkl~KE~s~L~~iVe~~~~l~~~leDl~e-L~Ela~ee~deel~~e~~~~l 100 (362)
T d1gqea_ 22 LDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSG-LLELAVEADDEETFNEAVAEL 100 (362)
T ss_dssp TTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcCChhhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhhhHHHHHHHHHHH
Q ss_pred HHHHHHHHHH
Q 014418 377 SMSRQRSEEK 386 (425)
Q Consensus 377 A~a~rkAEek 386 (425)
..+...-++.
T Consensus 101 ~~l~~~l~~l 110 (362)
T d1gqea_ 101 DALEEKLAQL 110 (362)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhhhhhHH
Done!