BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014424
(425 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IHX|A Chain A, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|B Chain B, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|C Chain C, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|D Chain D, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHY|A Chain A, Gapdh Complexed With Adp-Ribose
pdb|1IHY|B Chain B, Gapdh Complexed With Adp-Ribose
pdb|1IHY|C Chain C, Gapdh Complexed With Adp-Ribose
pdb|1IHY|D Chain D, Gapdh Complexed With Adp-Ribose
Length = 333
Score = 457 bits (1175), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/332 (66%), Positives = 260/332 (78%), Gaps = 2/332 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHG+FKG + V
Sbjct: 1 SKIGINGFGRIGRLVLRTALEMGAQVVAV-NDPFIALEYMVYMFKYDSTHGMFKGEVKV- 58
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKV+IS
Sbjct: 59 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIIS 118
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNASCTTNCLAP+AKV+HE F I+EGLM
Sbjct: 119 APSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 178
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGA+QNIIPSSTGAAKAVGKV+P+L+GKLTGMAFRVPTPNVSV
Sbjct: 179 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSV 238
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K SY+D+KAA+K ASEG L+G+LGYT++DVVS DF GD+RSSIFDAKAGI
Sbjct: 239 VDLTVRLGKECSYDDIKAAMKTASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQ 298
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMALV 421
LS +F+K+VSWYDNE+GYS RV+DLI+HM V
Sbjct: 299 LSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKV 330
>pdb|1GPD|G Chain G, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|1GPD|R Chain R, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 334
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/332 (66%), Positives = 261/332 (78%), Gaps = 2/332 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHGVFKG + +
Sbjct: 2 SKIGINGFGRIGRLVLRAALSCGAQVVAV-NDPFIALEYMVYMFKYDSTHGVFKGEVKM- 59
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKVVIS
Sbjct: 60 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVIS 119
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNASCTTNCLAP+AKV+HE F I+EGLM
Sbjct: 120 APSADAPMFVCGVNLEKYSKDMTVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 179
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGA+QNIIPSSTGAAKAVGKV+P+L+GKLTGMAFRVPTP+VSV
Sbjct: 180 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPDVSV 239
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K SY+D+KAA+K ASEG L+G LGYT++DVVS+DF+GD+RSSIFDAKAGI
Sbjct: 240 VDLTVRLGKECSYDDIKAAMKTASEGPLQGFLGYTEDDVVSSDFIGDNRSSIFDAKAGIQ 299
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMALV 421
LS +F+K+VSWYDNE+GYS RV+DL++HM V
Sbjct: 300 LSKTFVKVVSWYDNEFGYSQRVIDLLKHMQKV 331
>pdb|4GPD|1 Chain 1, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|2 Chain 2, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|3 Chain 3, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|4 Chain 4, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
Length = 333
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/332 (66%), Positives = 261/332 (78%), Gaps = 2/332 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHGVFKG + +
Sbjct: 1 SKIGINGFGRIGRLVLRAALSCGAQVVAV-NDPFIALEYMVYMFKYDSTHGVFKGEVKM- 58
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKVVIS
Sbjct: 59 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVIS 118
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNASCTTNCLAP+AKV+HE F I+EGLM
Sbjct: 119 APSADAPMFVCGVNLEKYSKDMTVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 178
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGA+QNIIPSSTGAAKAVGKV+P+L+GKLTGMAFRVPTP+VSV
Sbjct: 179 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPDVSV 238
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K SY+D+KAA+K ASEG L+G LGYT++DVVS+DF+GD+RSSIFDAKAGI
Sbjct: 239 VDLTVRLGKECSYDDIKAAMKTASEGPLQGFLGYTEDDVVSSDFIGDNRSSIFDAKAGIQ 298
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMALV 421
LS +F+K+VSWYDNE+GYS RV+DL++HM V
Sbjct: 299 LSKTFVKVVSWYDNEFGYSQRVIDLLKHMQKV 330
>pdb|1SZJ|G Chain G, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1SZJ|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1CRW|G Chain G, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
pdb|1CRW|R Chain R, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
Length = 333
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/332 (66%), Positives = 259/332 (78%), Gaps = 2/332 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHG+FKG +
Sbjct: 1 SKIGINGFGRIGRLVLRAALEMGAQVVAV-NDPFIALEYMVYMFKYDSTHGMFKGEVKA- 58
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKV+IS
Sbjct: 59 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIIS 118
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNASCTTNCLAP+AKV+HE F I+EGLM
Sbjct: 119 APSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 178
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGA+QNIIPSSTGAAKAVGKV+P+L+GKLTGMAFRVPTPNVSV
Sbjct: 179 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSV 238
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K SY+D+KAA+K ASEG L+G+LGYT++DVVS DF GD+RSSIFDAKAGI
Sbjct: 239 VDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQ 298
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMALV 421
LS +F+K+VSWYDNE+GYS RV+DLI+HM V
Sbjct: 299 LSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKV 330
>pdb|3E5R|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3V1Y|O Chain O, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|A Chain A, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|B Chain B, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|C Chain C, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
Length = 337
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/333 (66%), Positives = 254/333 (76%), Gaps = 1/333 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGT-I 146
G K+GINGFGRIGRL NDPFI YM YMFKYD+ HG +K + I
Sbjct: 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDI 61
Query: 147 NVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKV 206
+ D TL + K + VF R+P EIPW + G +YVVES+GVFT KA+AH+KGGAKKV
Sbjct: 62 KIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKV 121
Query: 207 VISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXX 266
VISAPS DAPMFV GVNE Y +++IVSNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 122 VISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVH 181
Query: 267 XXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPN 326
DGPS KDWRGGR AS NIIPSSTGAAKAVGKVLPDLNGKLTGM+FRVPT +
Sbjct: 182 AITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVD 241
Query: 327 VSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKA 386
VSVVDLT R+ K ASY+ +K+AIK ASEG LKGI+GY +ED+VS DFVGDSRSSIFDAKA
Sbjct: 242 VSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKA 301
Query: 387 GIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
GI L+ +F+KLV+WYDNEWGYSNRV+DLI HMA
Sbjct: 302 GIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMA 334
>pdb|3E6A|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
Length = 336
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/333 (66%), Positives = 254/333 (76%), Gaps = 1/333 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGT-I 146
G K+GINGFGRIGRL NDPFI YM YMFKYD+ HG +K + I
Sbjct: 1 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDI 60
Query: 147 NVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKV 206
+ D TL + K + VF R+P EIPW + G +YVVES+GVFT KA+AH+KGGAKKV
Sbjct: 61 KIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKV 120
Query: 207 VISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXX 266
VISAPS DAPMFV GVNE Y +++IVSNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 121 VISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVH 180
Query: 267 XXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPN 326
DGPS KDWRGGR AS NIIPSSTGAAKAVGKVLPDLNGKLTGM+FRVPT +
Sbjct: 181 AITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVD 240
Query: 327 VSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKA 386
VSVVDLT R+ K ASY+ +K+AIK ASEG LKGI+GY +ED+VS DFVGDSRSSIFDAKA
Sbjct: 241 VSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKA 300
Query: 387 GIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
GI L+ +F+KLV+WYDNEWGYSNRV+DLI HMA
Sbjct: 301 GIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMA 333
>pdb|1DSS|G Chain G, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
pdb|1DSS|R Chain R, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
Length = 333
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 258/332 (77%), Gaps = 2/332 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHG+FKG +
Sbjct: 1 SKIGINGFGRIGRLVLRAALEMGAQVVAV-NDPFIALEYMVYMFKYDSTHGMFKGEVKA- 58
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKV+IS
Sbjct: 59 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIIS 118
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNAS TTNCLAP+AKV+HE F I+EGLM
Sbjct: 119 APSADAPMFVCGVNLEKYSKDMKVVSNASXTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 178
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGA+QNIIPSSTGAAKAVGKV+P+L+GKLTGMAFRVPTPNVSV
Sbjct: 179 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSV 238
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K SY+D+KAA+K ASEG L+G+LGYT++DVVS DF GD+RSSIFDAKAGI
Sbjct: 239 VDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQ 298
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMALV 421
LS +F+K+VSWYDNE+GYS RV+DLI+HM V
Sbjct: 299 LSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKV 330
>pdb|1J0X|O Chain O, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|P Chain P, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|Q Chain Q, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|R Chain R, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
Length = 332
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 252/329 (76%), Gaps = 1/329 (0%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVG+NGFGRIGRL NDPFID YM YMF+YDSTHG F GT+ +
Sbjct: 2 KVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKA-E 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L INGK I +F +RDPA I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISA
Sbjct: 61 NGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISA 120
Query: 211 PSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXX 270
PSADAPMFV+GVN + Y ++ IVSNAS TTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 121 PSADAPMFVMGVNHEKYDNSLKIVSNASXTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 180
Query: 271 XXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVV 330
DGPS K WR GRGA+QNIIP+STGAAKAVGKV+P+LNGKLTGMAFRVPTPNVSVV
Sbjct: 181 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 240
Query: 331 DLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGL 390
DLTCRL K A Y+D+K +K ASEG LKGILGYT++ VVS DF D+ SS FDA AGI L
Sbjct: 241 DLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIAL 300
Query: 391 SASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ F+KL+SWYDNE+GYSNRV+DL+ HMA
Sbjct: 301 NDHFVKLISWYDNEFGYSNRVVDLMVHMA 329
>pdb|1ZNQ|O Chain O, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|P Chain P, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|R Chain R, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|Q Chain Q, Crsytal Structure Of Human Liver Gapdh
Length = 338
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/332 (64%), Positives = 252/332 (75%), Gaps = 1/332 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIN 147
G KVG+NGFGRIGRL NDPFID YM YMF+YDSTHG F GT+
Sbjct: 5 GKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVK 64
Query: 148 VVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVV 207
++ L ING I +F +RDP++I WGD G +YVVES+GVFTT+ KA AH++GGAK+V+
Sbjct: 65 A-ENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVI 123
Query: 208 ISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
ISAPSADAPMFV+GVN + Y ++ I+SNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 124 ISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHA 183
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
DGPS K WR GRGA QNIIP+STGAAKAVGKV+P+LNGKLTGMAFRVPT NV
Sbjct: 184 ITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANV 243
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDLTCRL K A Y+D+K +K ASEG LKGILGYT+ VVS+DF D+ SS FDA AG
Sbjct: 244 SVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAG 303
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
I L+ F+KL+SWYDNE+GYSNRV+DL+ HMA
Sbjct: 304 IALNDHFVKLISWYDNEFGYSNRVVDLMAHMA 335
>pdb|1U8F|O Chain O, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|P Chain P, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|Q Chain Q, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|R Chain R, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
Length = 335
Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/332 (64%), Positives = 252/332 (75%), Gaps = 1/332 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIN 147
G KVG+NGFGRIGRL NDPFID YM YMF+YDSTHG F GT+
Sbjct: 2 GKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVK 61
Query: 148 VVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVV 207
++ L ING I +F +RDP++I WGD G +YVVES+GVFTT+ KA AH++GGAK+V+
Sbjct: 62 A-ENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVI 120
Query: 208 ISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
ISAPSADAPMFV+GVN + Y ++ I+SNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 121 ISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHA 180
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
DGPS K WR GRGA QNIIP+STGAAKAVGKV+P+LNGKLTGMAFRVPT NV
Sbjct: 181 ITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANV 240
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDLTCRL K A Y+D+K +K ASEG LKGILGYT+ VVS+DF D+ SS FDA AG
Sbjct: 241 SVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAG 300
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
I L+ F+KL+SWYDNE+GYSNRV+DL+ HMA
Sbjct: 301 IALNDHFVKLISWYDNEFGYSNRVVDLMAHMA 332
>pdb|3GPD|R Chain R, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
pdb|3GPD|G Chain G, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 334
Score = 440 bits (1132), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/332 (63%), Positives = 253/332 (76%), Gaps = 1/332 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIN 147
G KVG++GFGRIGRL NDPFID YM YMF+YDSTHG F GT+
Sbjct: 1 GKVKVGVDGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVK 60
Query: 148 VVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVV 207
+D L I+GK I +F +RDP I WGD G YVVES+GVFTT+ KA AH+KGGAK++V
Sbjct: 61 A-EDGKLVIDGKAITIFQERDPENIKWGDAGTAYVVESTGVFTTMEKAGAHLKGGAKRIV 119
Query: 208 ISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
ISAPSADAPMFV+GVN Y ++ I+SNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 120 ISAPSADAPMFVMGVNHFKYANSLKIISNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHA 179
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
D PS K WRGGRGA+QN+IP+STGAAKAVGKV+P+L+GKLTGMAFRVPT NV
Sbjct: 180 ITATQKTVDSPSGKLWRGGRGAAQNLIPASTGAAKAVGKVIPELDGKLTGMAFRVPTANV 239
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SV+DLTCRL K A Y+D+K +K ASEG LKGILGYT+++VVS+DF G + SSIFDA AG
Sbjct: 240 SVLDLTCRLEKPAKYDDIKKVVKEASEGPLKGILGYTEDEVVSDDFNGSNHSSIFDAGAG 299
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
I L+ +F+KLVSWYDNE+GYS RV+DL+ HMA
Sbjct: 300 IELNDTFVKLVSWYDNEFGYSERVVDLMAHMA 331
>pdb|2VYN|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 334
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/335 (62%), Positives = 250/335 (74%), Gaps = 15/335 (4%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIN--- 147
KVGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KGT+
Sbjct: 3 KVGINGFGRIGRLVLRVCMEKGVRVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGTVEHKN 61
Query: 148 ---VVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAK 204
VVD+ LEIN VF ++P EIPW G YVVE++GV+ +I AS H+ GA+
Sbjct: 62 GRLVVDN--LEIN-----VFQXKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGAR 114
Query: 205 KVVISAPSADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMX 263
+V+++APS DAPM V+GVNEK Y P +M +VSNAS TTNCLAPLAKV+HE FGI+EGLM
Sbjct: 115 RVIVTAPSPDAPMLVMGVNEKDYNPGSMTVVSNASXTTNCLAPLAKVIHERFGIVEGLMT 174
Query: 264 XXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 323
DGPS KDWRGGRGA QNIIPSSTGAAKAVGKV+P+LNGKLTGMAFRVP
Sbjct: 175 TVHAYTATQKTVDGPSKKDWRGGRGAHQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVP 234
Query: 324 TPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 383
TPNVSVVDLTCRLA+ ASY +K A+K A++G + GIL YT++ VVS DF GDS SSIFD
Sbjct: 235 TPNVSVVDLTCRLAQPASYTAIKEAVKAAAKGPMAGILAYTEDQVVSTDFNGDSHSSIFD 294
Query: 384 AKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHM 418
AKAGI L+ +F+KLVSWYDNE+GYS+RV+DL+ +M
Sbjct: 295 AKAGIALNDNFVKLVSWYDNEYGYSHRVVDLLRYM 329
>pdb|2I5P|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
pdb|2I5P|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
Length = 342
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/328 (61%), Positives = 242/328 (73%), Gaps = 2/328 (0%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
+ INGFGRIGRL NDPFI Y AYMFKYDSTHG +KG ++ D
Sbjct: 17 IAINGFGRIGRLVLRIALERKNIDVVAINDPFISVDYAAYMFKYDSTHGKYKGEVSH-DG 75
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
S L INGK + VF ++DPA +PWG GVD V+S+GVF + A H+ GAKKVVI+AP
Sbjct: 76 SNLIINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAP 135
Query: 212 SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXX 271
S APMFVVGVNE Y IVSNASCTTNCLAP+AK++++EFGI EGLM
Sbjct: 136 SKTAPMFVVGVNEDKYNGE-KIVSNASCTTNCLAPIAKIINDEFGIEEGLMTTVHSITAT 194
Query: 272 XXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVD 331
DGPS KDWRGGR AS NIIPSSTGAAKAVGKVLP+L GKLTGMAFRVPT +VSVVD
Sbjct: 195 QKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTTDVSVVD 254
Query: 332 LTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLS 391
LT +L K A+Y+++KAA+K SEG LK ++GYT++ VVS+DF+GD+ S+IFDA AGI LS
Sbjct: 255 LTVKLVKAATYDEIKAAVKKVSEGKLKDVVGYTEDAVVSSDFLGDTHSTIFDAAAGIQLS 314
Query: 392 ASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
F+KLV+WYDNE+GYS RV+DL+EH+A
Sbjct: 315 PKFVKLVAWYDNEYGYSTRVVDLVEHVA 342
>pdb|3H9E|A Chain A, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3H9E|B Chain B, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3PFW|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3PFW|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3H9E|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
pdb|3H9E|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
Length = 346
Score = 410 bits (1055), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/328 (60%), Positives = 245/328 (74%), Gaps = 3/328 (0%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG++ +
Sbjct: 10 VGINGFGRIGRLVLRACMEKGVKVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGSVEF-RN 67
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
L ++ I V+ ++P +IPW G YVVES+GV+ +I AS H+ GA++VVISAP
Sbjct: 68 GQLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAP 127
Query: 212 SADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXX 270
S DAPMFV+GVNE Y P +MNIVSNASCTTNCLAPLAKV+HE FGI+EGLM
Sbjct: 128 SPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTA 187
Query: 271 XXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVV 330
DGPS K WR GRGA QNIIP+STGAAKAV KV+P+L GKLTGMAFRVPTP+VSVV
Sbjct: 188 TQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVV 247
Query: 331 DLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGL 390
DLTCRLA+ A Y +K A+K A++G + GIL YT+++VVS DF+GD+ SSIFDAKAGI L
Sbjct: 248 DLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIAL 307
Query: 391 SASFMKLVSWYDNEWGYSNRVLDLIEHM 418
+ +F+KL+SWYDNE+GYS+RV+DL+ +M
Sbjct: 308 NDNFVKLISWYDNEYGYSHRVVDLLRYM 335
>pdb|3PYM|A Chain A, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
pdb|3PYM|B Chain B, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
Length = 332
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/329 (60%), Positives = 242/329 (73%), Gaps = 1/329 (0%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
+V INGFGRIGRL NDPFI Y AYMFKYDSTHG + G ++ D
Sbjct: 3 RVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH-D 61
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D + ++GK I + +RDPA +PWG VD ++S+GVF + A H+ GAKKVVI+A
Sbjct: 62 DKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITA 121
Query: 211 PSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXX 270
PS+ APMFV+GVNE+ Y ++ IVSNASCTTNCLAPLAKV+++ FGI EGLM
Sbjct: 122 PSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSLTA 181
Query: 271 XXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVV 330
DGPS KDWRGGR AS NIIPSSTGAAKAVGKVLP+L GKLTGMAFRVPT +VSVV
Sbjct: 182 TQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVV 241
Query: 331 DLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGL 390
DLT +L K +Y+++K +K A+EG LKG+LGYT++ VVS+DF+GDS SSIFDA AGI L
Sbjct: 242 DLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQL 301
Query: 391 SASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
S F+KLVSWYDNE+GYS RV+DL+EH+A
Sbjct: 302 SPKFVKLVSWYDNEYGYSTRVVDLVEHVA 330
>pdb|4IQ8|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase 3 From Saccharomyces Cerevisiae
Length = 340
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/329 (60%), Positives = 242/329 (73%), Gaps = 1/329 (0%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
+V INGFGRIGRL NDPFI Y AYMFKYDSTHG + G ++ D
Sbjct: 11 RVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH-D 69
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D + ++GK I + +RDPA +PWG VD ++S+GVF + A H+ GAKKVVI+A
Sbjct: 70 DKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITA 129
Query: 211 PSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXX 270
PS+ APMFV+GVNE+ Y ++ IVSNASCTTNCLAPLAKV+++ FGI EGLM
Sbjct: 130 PSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSLTA 189
Query: 271 XXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVV 330
DGPS KDWRGGR AS NIIPSSTGAAKAVGKVLP+L GKLTGMAFRVPT +VSVV
Sbjct: 190 TQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVV 249
Query: 331 DLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGL 390
DLT +L K +Y+++K +K A+EG LKG+LGYT++ VVS+DF+GDS SSIFDA AGI L
Sbjct: 250 DLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQL 309
Query: 391 SASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
S F+KLVSWYDNE+GYS RV+DL+EH+A
Sbjct: 310 SPKFVKLVSWYDNEYGYSTRVVDLVEHVA 338
>pdb|1GAD|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAD|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1DC3|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC3|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC5|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC5|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC6|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes.
pdb|1DC6|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
Length = 330
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/330 (62%), Positives = 244/330 (73%), Gaps = 4/330 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V
Sbjct: 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-K 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV++
Sbjct: 61 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 120
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D PMFV G N Y +IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 121 PSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT 179
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGASQNIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVPTPNVSV
Sbjct: 180 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV 239
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K A+YE +KAA+K A+EG +KG+LGYT++DVVS DF G+ +S+FDAKAGI
Sbjct: 240 VDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA 299
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
L+ +F+KLVSWYDNE GYSN+VLDLI H++
Sbjct: 300 LNDNFVKLVSWYDNETGYSNKVLDLIAHIS 329
>pdb|1S7C|A Chain A, Crystal Structure Of Mes Buffer Bound Form Of
Glyceraldehyde 3- Phosphate Dehydrogenase From
Escherichia Coli
Length = 331
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/330 (62%), Positives = 244/330 (73%), Gaps = 4/330 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V
Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-K 61
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV++
Sbjct: 62 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 121
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D PMFV G N Y +IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 122 PSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT 180
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGASQNIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVPTPNVSV
Sbjct: 181 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV 240
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K A+YE +KAA+K A+EG +KG+LGYT++DVVS DF G+ +S+FDAKAGI
Sbjct: 241 VDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA 300
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
L+ +F+KLVSWYDNE GYSN+VLDLI H++
Sbjct: 301 LNDNFVKLVSWYDNETGYSNKVLDLIAHIS 330
>pdb|1GAE|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAE|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
Length = 330
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/330 (62%), Positives = 243/330 (73%), Gaps = 4/330 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V
Sbjct: 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-K 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV++
Sbjct: 61 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 120
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D PMFV G N Y +IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 121 PSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT 179
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGASQNIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVPTPNVSV
Sbjct: 180 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV 239
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K A+YE +KAA+K A+EG +KG+LGYT++DVVS DF G+ +S+FDAKAGI
Sbjct: 240 VDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA 299
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
L+ +F+KLVSWYD E GYSN+VLDLI H++
Sbjct: 300 LNDNFVKLVSWYDTETGYSNKVLDLIAHIS 329
>pdb|2VYN|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 331
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/330 (62%), Positives = 243/330 (73%), Gaps = 4/330 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V
Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-K 61
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV++
Sbjct: 62 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 121
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D PMFV G N Y +IVSNAS TTNCLAPLAKV+++ FGI+EGLM
Sbjct: 122 PSKDNTPMFVKGANFDKY-AGQDIVSNASXTTNCLAPLAKVINDNFGIIEGLMTTVHATT 180
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGASQNIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVPTPNVSV
Sbjct: 181 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV 240
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K A+YE +KAA+K A+EG +KG+LGYT++DVVS DF G+ +S+FDAKAGI
Sbjct: 241 VDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVXTSVFDAKAGIA 300
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
L+ +F+KLVSWYDNE GYSN+VLDLI H++
Sbjct: 301 LNDNFVKLVSWYDNETGYSNKVLDLIAHIS 330
>pdb|3CPS|A Chain A, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|3CPS|B Chain B, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 354
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/332 (60%), Positives = 241/332 (72%), Gaps = 5/332 (1%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
+GINGFGRIGRL NDPF+D +YMAY+ KYDS HG F GT+ V
Sbjct: 20 LGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SG 78
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
L INGK++KVF +DPAEIPWG G V ES+GVFTT KAS H+KGGAKKV+ISAP
Sbjct: 79 KDLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 138
Query: 212 SAD-APMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
D PM+V+GVN Y P+ N++SNASCTTNCLAPLAK+++++FGI+EGLM
Sbjct: 139 PKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLT 198
Query: 270 XXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
DGPS KDWR GR A NIIP+STGAAKAVGKV+P LNGKLTGMA RVPTP+V
Sbjct: 199 ANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDV 258
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDLTC+LAK AS E++ A+K AS G +KGI+GYT +DVVS DF+G SSIFD A
Sbjct: 259 SVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNAC 318
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
I L+ SF+KL+SWYDNE GYSNR++DL ++A
Sbjct: 319 IALNDSFVKLISWYDNESGYSNRLVDLAVYVA 350
>pdb|1VSU|A Chain A, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|B Chain B, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|C Chain C, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|D Chain D, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|A Chain A, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|B Chain B, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|C Chain C, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|D Chain D, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/332 (60%), Positives = 241/332 (72%), Gaps = 5/332 (1%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
+GINGFGRIGRL NDPF+D +YMAY+ KYDS HG F GT+ V
Sbjct: 25 LGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SG 83
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
L INGK++KVF +DPAEIPWG G V ES+GVFTT KAS H+KGGAKKV+ISAP
Sbjct: 84 KDLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 143
Query: 212 SAD-APMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
D PM+V+GVN Y P+ N++SNASCTTNCLAPLAK+++++FGI+EGLM
Sbjct: 144 PKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLT 203
Query: 270 XXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
DGPS KDWR GR A NIIP+STGAAKAVGKV+P LNGKLTGMA RVPTP+V
Sbjct: 204 ANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDV 263
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDLTC+LAK AS E++ A+K AS G +KGI+GYT +DVVS DF+G SSIFD A
Sbjct: 264 SVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNAC 323
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
I L+ SF+KL+SWYDNE GYSNR++DL ++A
Sbjct: 324 IALNDSFVKLISWYDNESGYSNRLVDLAVYVA 355
>pdb|3CIF|A Chain A, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|B Chain B, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|C Chain C, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|D Chain D, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/332 (59%), Positives = 239/332 (71%), Gaps = 5/332 (1%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
+GINGFGRIGRL NDPF+D +YMAY+ KYDS HG F GT+ V
Sbjct: 25 LGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SG 83
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
L INGK++KVF +DPAEIPWG G V ES+GVFTT KAS H+KGGAKKV+ISAP
Sbjct: 84 KDLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 143
Query: 212 SAD-APMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
D PM+V+GVN Y P+ N++SNAS TTNCLAPLAK+++++FGI+EGLM
Sbjct: 144 PKDNVPMYVMGVNNTEYDPSKFNVISNASSTTNCLAPLAKIINDKFGIVEGLMTTVHSLT 203
Query: 270 XXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
DGPS KDWR GR A NIIP+STGAAKAVGKV+P LNGKLTGMA RVPTP+V
Sbjct: 204 ANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDV 263
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDLTC+LAK AS E++ A+K AS G +KGI+GYT +DVVS DF+G SSI D A
Sbjct: 264 SVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSILDKNAC 323
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
I L+ SF+KL+SWYDNE GYSNR++DL ++A
Sbjct: 324 IALNDSFVKLISWYDNESGYSNRLVDLAVYVA 355
>pdb|1DC4|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC4|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
Length = 330
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/330 (60%), Positives = 237/330 (71%), Gaps = 4/330 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA Y AY KYDSTHG F GT+ V
Sbjct: 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYXAYXLKYDSTHGRFDGTVEV-K 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV +
Sbjct: 61 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVXTG 120
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D P FV G N Y +IVSNASCTTNCLAPLAKV+++ FGI+EGL
Sbjct: 121 PSKDNTPXFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLXTTVHATT 179
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
DGPS KDWRGGRGASQNIIPSSTGAAKAVGKVLP+LNGKLTG AFRVPTPNVSV
Sbjct: 180 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGXAFRVPTPNVSV 239
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDLT RL K A+YE +KAA+K A+EG KG+LGYT++DVVS DF G+ +S+FDAKAGI
Sbjct: 240 VDLTVRLEKAATYEQIKAAVKAAAEGEXKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA 299
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
L+ +F+KLVSWYDNE GYSN+VLDLI H++
Sbjct: 300 LNDNFVKLVSWYDNETGYSNKVLDLIAHIS 329
>pdb|2B4R|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
Length = 345
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/332 (59%), Positives = 234/332 (70%), Gaps = 4/332 (1%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
TK+GINGFGRIGRL NDPF+D ++ Y+ KYDS HG F +
Sbjct: 12 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHA 71
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
D L I K + VF+++DP++IPWG VD V ES+GVF T AS+H+KGGAKKV++S
Sbjct: 72 DGFLL-IGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMS 130
Query: 210 APSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
AP D P++V+G+N Y IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 131 APPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAS 190
Query: 269 XXXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPN 326
DGPS KDWR GR A NIIP+STGAAKAVGKVLP+LNGKLTG+AFRVP
Sbjct: 191 TANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGT 250
Query: 327 VSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKA 386
VSVVDL CRL K A YE+V IK A+EG LKGILGYT+++VVS DFV D+RSSIFD KA
Sbjct: 251 VSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKA 310
Query: 387 GIGLSASFMKLVSWYDNEWGYSNRVLDLIEHM 418
G+ L+ +F KLVSWYDNEWGYSNRVLDL H+
Sbjct: 311 GLALNDNFFKLVSWYDNEWGYSNRVLDLAVHI 342
>pdb|1YWG|O Chain O, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|P Chain P, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|Q Chain Q, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|R Chain R, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
Length = 337
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/332 (59%), Positives = 234/332 (70%), Gaps = 4/332 (1%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
TK+GINGFGRIGRL NDPF+D ++ Y+ KYDS HG F +
Sbjct: 4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHA 63
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
D L I K + VF+++DP++IPWG VD V ES+GVF T AS+H+KGGAKKV++S
Sbjct: 64 DGFLL-IGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMS 122
Query: 210 APSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
AP D P++V+G+N Y IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 123 APPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAS 182
Query: 269 XXXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPN 326
DGPS KDWR GR A NIIP+STGAAKAVGKVLP+LNGKLTG+AFRVP
Sbjct: 183 TANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGT 242
Query: 327 VSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKA 386
VSVVDL CRL K A YE+V IK A+EG LKGILGYT+++VVS DFV D+RSSIFD KA
Sbjct: 243 VSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKA 302
Query: 387 GIGLSASFMKLVSWYDNEWGYSNRVLDLIEHM 418
G+ L+ +F KLVSWYDNEWGYSNRVLDL H+
Sbjct: 303 GLALNDNFFKLVSWYDNEWGYSNRVLDLAVHI 334
>pdb|3STH|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
Length = 361
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/334 (57%), Positives = 238/334 (71%), Gaps = 5/334 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
K+GINGFGRIGRL NDPF+ YM Y+ +YDS HG + G ++
Sbjct: 25 KLGINGFGRIGRLVFRAAMERGDVEVLAINDPFMSLDYMVYLLRYDSVHGHYPGEVSH-K 83
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L + GK + VF++++P IPWG GV Y+ ES+G+F T KA AH+ GAKKV++SA
Sbjct: 84 DGKLIVGGKAVTVFNEKEPTAIPWGQAGVHYICESTGIFLTKEKAQAHLTNGAKKVIMSA 143
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P D PMFV+GVN YK + IVSNASCTTNCLAPLAK+VH++FGI+EGLM
Sbjct: 144 PPKDDTPMFVMGVNNDQYKSSDVIVSNASCTTNCLAPLAKIVHDKFGIVEGLMTTVHAMT 203
Query: 270 XXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
DGPS KDWR GR A NIIP+STGAAKAVGK++P LNGKLTGMAFRVP P+V
Sbjct: 204 ANQLTVDGPSKGGKDWRAGRSAGVNIIPASTGAAKAVGKIIPSLNGKLTGMAFRVPVPDV 263
Query: 328 SVVDLTCRLAKGASYEDVKAAIKY-ASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKA 386
SVVDLTC+LAK A YED+ AA+K A+ G +KGI+ YTDE+VVS+DFV SS+FD A
Sbjct: 264 SVVDLTCKLAKPAKYEDIVAAVKEAATSGPMKGIISYTDEEVVSSDFVHCKFSSVFDINA 323
Query: 387 GIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMAL 420
GI L+ +F+KLVSWYDNEWGYSNR+++L +M++
Sbjct: 324 GIMLNDTFVKLVSWYDNEWGYSNRLVELAHYMSV 357
>pdb|2X0N|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|O Chain O, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|P Chain P, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|Q Chain Q, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|R Chain R, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
Length = 359
Score = 345 bits (885), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/348 (52%), Positives = 232/348 (66%), Gaps = 19/348 (5%)
Query: 91 KVGINGFGRIGRLXXXXX----XXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ D DA+Y AY KYDS HG FK ++
Sbjct: 4 KVGINGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFKHSV 63
Query: 147 N-------VVDDSTLEING-KLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
+ V D TL +NG +++ V ++R+PA++PWG GV+YV+ES+G+FT + A H
Sbjct: 64 STTKSKPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKV-VHEEF 255
++GGA+KVVISAP S A FV+GVN Y P ++VSNASCTTNCLAPL V V E F
Sbjct: 124 LRGGARKVVISAPASGGAKTFVMGVNHNNYNPREQHVVSNASCTTNCLAPLVHVLVKEGF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKL 315
GI GLM DG S+KDWRGGR A+ NIIPS+TGAAKAVG V+P GKL
Sbjct: 184 GISTGLMTTVHSYTATQKTVDGVSVKDWRGGRAAALNIIPSTTGAAKAVGMVIPSTQGKL 243
Query: 316 TGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVG 375
TGMAFRVPT +VSVVDLT + S +++ AA+K AS+ +K ILGYTDE++VS DF+
Sbjct: 244 TGMAFRVPTADVSVVDLTFIATRDTSIKEIDAALKRASKTYMKNILGYTDEELVSADFIS 303
Query: 376 DSRSSIFDAKAGIGLSA----SFMKLVSWYDNEWGYSNRVLDLIEHMA 419
DSRSSI+D+KA + + F K+VSWYDNEWGYS+RV+DL+ HMA
Sbjct: 304 DSRSSIYDSKATLQNNLPNERRFFKIVSWYDNEWGYSHRVVDLVRHMA 351
>pdb|1K3T|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1ML3|A Chain A, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|B Chain B, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|C Chain C, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|D Chain D, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1QXS|C Chain C, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|D Chain D, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|A Chain A, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|B Chain B, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|3DMT|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3IDS|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
Length = 359
Score = 344 bits (883), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 181/348 (52%), Positives = 233/348 (66%), Gaps = 19/348 (5%)
Query: 91 KVGINGFGRIGRLXXXXXXXX----XXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ D DA+Y AY +YD+ HG FK +
Sbjct: 4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEV 63
Query: 147 -------NVVDDSTLEING-KLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
+V D TL +NG +++ V ++R+PA++PWG GV+YV+ES+G+FT A A H
Sbjct: 64 TTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKV-VHEEF 255
++GGA+KVVISAP S A V+GVN Y P+ ++VSNASCTTNCLAP+ V V E F
Sbjct: 124 LRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASCTTNCLAPIVHVLVKEGF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKL 315
G+ GLM DG S+KDWRGGR A+ NIIPS+TGAAKAVG V+P GKL
Sbjct: 184 GVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQGKL 243
Query: 316 TGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVG 375
TGM+FRVPTP+VSVVDLT A+ S +++ AA+K AS+ +KGILGYTDE++VS DF+
Sbjct: 244 TGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSADFIN 303
Query: 376 DSRSSIFDAKAGIG----LSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
D+RSSI+D+KA + F K+VSWYDNEWGYS+RV+DL+ HMA
Sbjct: 304 DNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMA 351
>pdb|3DMT|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
Length = 359
Score = 340 bits (871), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/348 (51%), Positives = 232/348 (66%), Gaps = 19/348 (5%)
Query: 91 KVGINGFGRIGRLXXXXXXXX----XXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ D DA+Y AY +YD+ HG FK +
Sbjct: 4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEV 63
Query: 147 -------NVVDDSTLEING-KLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
+V D TL +NG +++ V ++R+PA++PWG GV+YV+ES+G+FT A A H
Sbjct: 64 TTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKV-VHEEF 255
++GGA+KVVISAP S A V+GVN Y P+ ++VSNAS TTNCLAP+ V V E F
Sbjct: 124 LRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASXTTNCLAPIVHVLVKEGF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKL 315
G+ GLM DG S+KDWRGGR A+ NIIPS+TGAAKAVG V+P GKL
Sbjct: 184 GVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQGKL 243
Query: 316 TGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVG 375
TGM+FRVPTP+VSVVDLT A+ S +++ AA+K AS+ +KGILGYTDE++VS DF+
Sbjct: 244 TGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSADFIN 303
Query: 376 DSRSSIFDAKAGIG----LSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
D+RSSI+D+KA + F K+VSWYDNEWGYS+RV+DL+ HMA
Sbjct: 304 DNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMA 351
>pdb|1GYP|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYQ|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
Length = 358
Score = 334 bits (857), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/348 (51%), Positives = 231/348 (66%), Gaps = 19/348 (5%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFID----AKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ +D A+Y AY K+D+ HG K T+
Sbjct: 4 KVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTV 63
Query: 147 NVVDDS-------TLEINGKLIK-VFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
V S L +NG IK V ++R+PA++PWG GVDYV+ES+G+FT KA H
Sbjct: 64 EAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEE-F 255
+KGGAKKVVISAP S A V+GVN+ Y P + ++VSNASCTTNCLAP+ V+ +E F
Sbjct: 124 IKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKL 315
GI GLM DG S+KDWRGGR A+ NIIPS+TGAAKAVG V+P GKL
Sbjct: 184 GIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKL 243
Query: 316 TGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVG 375
TGM+FRVPTP+VSVVDLT R + S +++ AIK A++ +KGILG+TDE++VS DF+
Sbjct: 244 TGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFIN 303
Query: 376 DSRSSIFDAKAGIGLS----ASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
D+RSS++D+KA + + F K+VSWYDNEW YS+RV+DL+ +MA
Sbjct: 304 DNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMA 351
>pdb|1A7K|A Chain A, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|B Chain B, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|C Chain C, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|D Chain D, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1I32|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
Length = 360
Score = 334 bits (857), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 179/348 (51%), Positives = 231/348 (66%), Gaps = 19/348 (5%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFID----AKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ +D A+Y AY K+D+ HG K T+
Sbjct: 4 KVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTV 63
Query: 147 NVVDDS-------TLEINGKLIK-VFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
V S L +NG IK V ++R+PA++PWG GVDYV+ES+G+FT KA H
Sbjct: 64 EAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEE-F 255
+KGGAKKVVISAP S A V+GVN+ Y P + ++VSNASCTTNCLAP+ V+ +E F
Sbjct: 124 IKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKL 315
GI GLM DG S+KDWRGGR A+ NIIPS+TGAAKAVG V+P GKL
Sbjct: 184 GIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKL 243
Query: 316 TGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVG 375
TGM+FRVPTP+VSVVDLT R + S +++ AIK A++ +KGILG+TDE++VS DF+
Sbjct: 244 TGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFIN 303
Query: 376 DSRSSIFDAKAGIGLS----ASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
D+RSS++D+KA + + F K+VSWYDNEW YS+RV+DL+ +MA
Sbjct: 304 DNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMA 351
>pdb|1GD1|O Chain O, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|P Chain P, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|Q Chain Q, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|2GD1|O Chain O, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|P Chain P, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|Q Chain Q, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|R Chain R, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|3CMC|O Chain O, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|P Chain P, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|Q Chain Q, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|R Chain R, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
Length = 334
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/331 (49%), Positives = 217/331 (65%), Gaps = 5/331 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND DA +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNASCTTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P KD R R A+++IIP++TGAAKAV VLP+L GKL GMA RVPTPNVS
Sbjct: 181 TNDQRILDLPH-KDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVS 239
Query: 329 VVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGI 388
VVDL L K + E+V AA+K A+EG LKGIL Y++E +VS D+ G + SS DA + +
Sbjct: 240 VVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTM 299
Query: 389 GLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ +K+VSWYDNE GYS+RV+DL ++A
Sbjct: 300 VIDGKMVKVVSWYDNETGYSHRVVDLAAYIA 330
>pdb|1DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|2DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/331 (49%), Positives = 216/331 (65%), Gaps = 5/331 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR N DA +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNG-LTDANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNASCTTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D S KD R R A+++IIP++TGAAKAV VLP+L GKL GMA RVPTPNVS
Sbjct: 181 TNDQRILDA-SHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVS 239
Query: 329 VVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGI 388
VVDL L K + E+V AA+K A+EG LKGIL Y++E +VS D+ G + SS DA + +
Sbjct: 240 VVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTM 299
Query: 389 GLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ +K+VSWYDNE GYS+RV+DL ++A
Sbjct: 300 VIDGKMVKVVSWYDNETGYSHRVVDLAAYIA 330
>pdb|1NPT|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NQA|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
Length = 334
Score = 309 bits (791), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/331 (49%), Positives = 216/331 (65%), Gaps = 5/331 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND DA +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNAS TTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASATTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P KD R R A+++IIP++TGAAKAV VLP+L GKL GMA RVPTPNVS
Sbjct: 181 TNDQRILDLPH-KDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVS 239
Query: 329 VVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGI 388
VVDL L K + E+V AA+K A+EG LKGIL Y++E +VS D+ G + SS DA + +
Sbjct: 240 VVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTM 299
Query: 389 GLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ +K+VSWYDNE GYS+RV+DL ++A
Sbjct: 300 VIDGKMVKVVSWYDNETGYSHRVVDLAAYIA 330
>pdb|1NQ5|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQO|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
Length = 334
Score = 309 bits (791), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/331 (49%), Positives = 216/331 (65%), Gaps = 5/331 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND DA +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNAS TTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASSTTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P KD R R A+++IIP++TGAAKAV VLP+L GKL GMA RVPTPNVS
Sbjct: 181 TNDQRILDLPH-KDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVS 239
Query: 329 VVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGI 388
VVDL L K + E+V AA+K A+EG LKGIL Y++E +VS D+ G + SS DA + +
Sbjct: 240 VVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTM 299
Query: 389 GLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ +K+VSWYDNE GYS+RV+DL ++A
Sbjct: 300 VIDGKMVKVVSWYDNETGYSHRVVDLAAYIA 330
>pdb|3DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|4DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 307 bits (787), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 163/331 (49%), Positives = 216/331 (65%), Gaps = 5/331 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND A +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDTG-GANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNASCTTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D S KD R R A+++IIP++TGAAKAV VLP+L GKL GMA RVPTPNVS
Sbjct: 181 TNDQRILDA-SHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVS 239
Query: 329 VVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGI 388
VVDL L K + E+V AA+K A+EG LKGIL Y++E +VS D+ G + SS DA + +
Sbjct: 240 VVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTM 299
Query: 389 GLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ +K+VSWYDNE GYS+RV+DL ++A
Sbjct: 300 VIDGKMVKVVSWYDNETGYSHRVVDLAAYIA 330
>pdb|1HDG|O Chain O, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
pdb|1HDG|Q Chain Q, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
Length = 332
Score = 300 bits (769), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 155/331 (46%), Positives = 212/331 (64%), Gaps = 6/331 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXX--XXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGRL ND D K +A++ KYDS H F G +
Sbjct: 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAIND-LTDTKTLAHLLKYDSVHKKFPGKVEY 60
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
++S L ++GK IKVF++ DP+++PW D GVD+V+ES+GVF KA H++ GAKKV+I
Sbjct: 61 TENS-LIVDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVII 119
Query: 209 SAPSADAPM-FVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP+ + V+G NE KP I+S ASCTTN +AP+ KV+HE+FGI+ G++
Sbjct: 120 TAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAPIVKVLHEKFGIVSGMLTTVHS 179
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
D P KD R R A+ NIIP++TGAAKAV V+P++ GKL GMA RVPTP+
Sbjct: 180 YTNDQRVLDLPH-KDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDG 238
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
S+ DLT + K + E+V A +K A+EG LKGI+GY DE +VS+D +G + S IFDA
Sbjct: 239 SITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATIT 298
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHM 418
+ +K+ SWYDNE+GYSNRV+D +E +
Sbjct: 299 NVIGGKLVKVASWYDNEYGYSNRVVDTLELL 329
>pdb|2EP7|A Chain A, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
pdb|2EP7|B Chain B, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
Length = 342
Score = 298 bits (764), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/339 (47%), Positives = 223/339 (65%), Gaps = 14/339 (4%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND DAK++A++ KYDS HG+FKG++ D
Sbjct: 4 KVGINGFGRIGRSFFRASWGREEIEIVAIND-LTDAKHLAHLLKYDSVHGIFKGSVEAKD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
DS + ++GK IKVF+++DP++IPWGD GVD V+E++GVF AS H++GGAKKV+I+A
Sbjct: 63 DSIV-VDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITA 121
Query: 211 PSADAPMFVV-GVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + VV GVNE+ Y P NI+SNASCTTNCLAP KV++E FG+ +G M
Sbjct: 122 PAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVHAY 181
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P KD+R R A+ NI+P++TGAAKA+G+V+P+L GKL G A RVP P+ S
Sbjct: 182 TNDQRLLDLPH-KDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDGS 240
Query: 329 VVDLTCRLAKG-ASYEDV-----KAAIKYASEGS--LKGILGYTDEDVVSNDFVGDSRSS 380
++DLT + K +S E+V +AA KY G LK IL Y ++ +VS D VG+ S+
Sbjct: 241 LIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSA 300
Query: 381 IFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
IFDA + + + + +WYDNEWGYS R+ DL+ ++A
Sbjct: 301 IFDAPL-TQVIDNLVHIAAWYDNEWGYSCRLRDLVIYLA 338
>pdb|3L0D|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
pdb|3L0D|B Chain B, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
Length = 356
Score = 281 bits (718), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/328 (45%), Positives = 203/328 (61%), Gaps = 6/328 (1%)
Query: 89 NTKVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTI 146
+ +V INGFGRIGR L ND + A++ +YDS HG F GT+
Sbjct: 23 SVRVAINGFGRIGRNILRAIIESGRQDIEVVALND-LGSVETNAHLLRYDSVHGCFPGTV 81
Query: 147 NVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKV 206
VV D+ ++I LIKVF++RDPA++PW +D +E +G+FT KASAH+ GAK+V
Sbjct: 82 QVVGDA-IDIGSSLIKVFAERDPAQLPWKALDIDIALECTGIFTARDKASAHLDAGAKRV 140
Query: 207 VISAPSADAPMFVV-GVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
++SAPS A + VV GVN + +++SNASCTTNCLAP+A+V+H GI +G M
Sbjct: 141 LVSAPSEGADLTVVYGVNHQFLSKEHHVISNASCTTNCLAPVAQVLHNTVGIEKGFMTTI 200
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325
D +D R A+ ++IP+STGAAKAVG VLP+L G L G++ RVPTP
Sbjct: 201 HSYTGDQPVLD-TMHRDLYRARAAALSMIPTSTGAAKAVGLVLPELKGLLDGVSIRVPTP 259
Query: 326 NVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAK 385
NVSVVDLT + + E++ AI+ A++GSLKGIL YTDE +VS DF + S+IF
Sbjct: 260 NVSVVDLTFTAKRSTTIEEINTAIRTAAQGSLKGILDYTDEKLVSCDFNHNPHSAIFHND 319
Query: 386 AGIGLSASFMKLVSWYDNEWGYSNRVLD 413
+ +++ WYDNEWG+SNR+ D
Sbjct: 320 QTKVIDGQLCRVLVWYDNEWGFSNRMCD 347
>pdb|3GNQ|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|E Chain E, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|F Chain F, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|G Chain G, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|H Chain H, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
Length = 344
Score = 274 bits (701), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 155/328 (47%), Positives = 203/328 (61%), Gaps = 9/328 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V ING+GRIGR L + DAK A++ +YD+ HG F G ++V
Sbjct: 12 RVAINGYGRIGRNTLRAFYENGKKHDLEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVSV 71
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D L +NG I+V + R+PAE+PWG+ GVD V+E +G FT+ KASAH+KGGAKKV+I
Sbjct: 72 -DGDYLVVNGDRIRVLANRNPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAKKVII 130
Query: 209 SAP---SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
SAP DA + V GVN K ++SNASCTTNCLAPL K ++++ G+ GLM
Sbjct: 131 SAPGGKDVDATI-VYGVNHDVLKAEHTVISNASCTTNCLAPLVKPLNDKIGLETGLMTTI 189
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325
D +D R R A+ + IP+ TGAA AVG VLP+LNGKL G A RVPT
Sbjct: 190 HAYTNDQVLTD-VYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI 248
Query: 326 NVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAK 385
NVS+VDL+ + + +V A +K ASEG+LKGILGY + +VS DF + SS FDA
Sbjct: 249 NVSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYNEAPLVSIDFNHNPASSTFDAT 308
Query: 386 AGIGLSASFMKLVSWYDNEWGYSNRVLD 413
+S +K+ SWYDNEWG+SNR+LD
Sbjct: 309 L-TKVSGRLVKVSSWYDNEWGFSNRMLD 335
>pdb|2PKQ|O Chain O, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|Q Chain Q, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|T Chain T, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 368
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/335 (47%), Positives = 205/335 (61%), Gaps = 8/335 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K ++ KYDS G FK + +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKSATHLLKYDSILGTFKADVKI 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
+D+ T I+GK IKV S RDP ++PW + G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 IDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 121
Query: 209 SAPS--ADAPMFVVGVNEKTYKPNM-NIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
+AP+ +D P +VVGVNEK Y ++ NI+SNASCTTNCLAP KV+ EE GI++G M
Sbjct: 122 TAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTTT 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325
D S +D R R A+ NI+P+STGAAKAV VLP L GKL G+A RVPTP
Sbjct: 182 HSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTP 240
Query: 326 NVSVVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDA 384
NVSVVDL + K G + EDV A + A+ G LKG+L D +VS DF SS D+
Sbjct: 241 NVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDS 300
Query: 385 KAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ + +K+V+WYDNEWGYS RV+DL + +A
Sbjct: 301 SLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVA 335
>pdb|3HJA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
Length = 356
Score = 271 bits (694), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/344 (43%), Positives = 211/344 (61%), Gaps = 12/344 (3%)
Query: 83 KSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVF 142
+++ G+ K+ INGFGRIGR ND D K +A++ KYDST GV+
Sbjct: 15 QTQGPGSMKLAINGFGRIGR-NVFKIAFERGIDIVAIND-LTDPKTLAHLLKYDSTFGVY 72
Query: 143 KGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASA----H 198
+ D + + ++G+ IK+ ++RDP +PW G+D V+ES+GVF++ H
Sbjct: 73 NKKVESRDGAIV-VDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDH 131
Query: 199 M-KGGAKKVVISAPSADA-PMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFG 256
+ GAKKV+++ P+ D V+GVN+ ++ VSNASCTTNCLAPLAKV+HE FG
Sbjct: 132 VNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFG 191
Query: 257 ILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLT 316
I +GLM D P D R R A+ +IIP+STGAAKAVG VLP+L GKL
Sbjct: 192 IEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLN 250
Query: 317 GMAFRVPTPNVSVVDLTCRLAK-GASYEDVKAAIKYASEG-SLKGILGYTDEDVVSNDFV 374
G + RVP P S+VDLT +L K + E++ + ++ ASE LKGILGYT++ +VS+D
Sbjct: 251 GTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIK 310
Query: 375 GDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHM 418
G+S SSI D + L F K++SWYDNE+GYS RV+DL + +
Sbjct: 311 GNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKL 354
>pdb|1CER|O Chain O, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|P Chain P, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|Q Chain Q, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|R Chain R, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|A Chain A, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|B Chain B, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|C Chain C, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|D Chain D, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
Length = 331
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/328 (47%), Positives = 205/328 (62%), Gaps = 7/328 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND D K +A++ KYDS + F G + D
Sbjct: 2 KVGINGFGRIGR-QVFRILHSRGVEVALIND-LTDNKTLAHLLKYDSIYHRFPGEV-AYD 58
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L ++GK I+ + +DP EIPW + GV V+ES+GVFT KA AH++GGAKKV+I+A
Sbjct: 59 DQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITA 118
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + V+GVN + Y P+ +I+SNASCTTN LAP+ KV+ E FG+ + LM
Sbjct: 119 PAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMKVLEEAFGVEKALMTTVHSY 178
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P KD R R A+ NIIP++TGAAKA VLP L G+ GMA RVPT S
Sbjct: 179 TNDQRLLDLPH-KDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGS 237
Query: 329 VVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGI 388
+ D+T L + + E+V AA+K A+EG LKGIL YT++++V D V D SSI DAK
Sbjct: 238 ISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTK 297
Query: 389 GLSASFMKLVSWYDNEWGYSNRVLDLIE 416
L + +K+ +WYDNEWGY+NRV DL+E
Sbjct: 298 AL-GNMVKVFAWYDNEWGYANRVADLVE 324
>pdb|4DIB|A Chain A, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|B Chain B, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|C Chain C, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|D Chain D, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|E Chain E, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|F Chain F, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|G Chain G, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|H Chain H, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
Length = 345
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 205/327 (62%), Gaps = 5/327 (1%)
Query: 86 SDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGT 145
S+ T+V INGFGRIGR+ N + ++ +A++ KYD+ HG F GT
Sbjct: 1 SNAMTRVAINGFGRIGRMVFRQAIKESAFEIVAINASY-PSETLAHLIKYDTVHGKFDGT 59
Query: 146 INVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKK 205
+ +D L ++GK+I++ + RDP E+PW D GV+ V+E++G F + KA H++ GAKK
Sbjct: 60 VEAFEDHLL-VDGKMIRLLNNRDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKK 118
Query: 206 VVISAPSADAPM-FVVGVNEKTYK-PNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMX 263
V+++AP + + VVGVNE ++SNASCTTNCLAP+ KV+ E+FGI GLM
Sbjct: 119 VILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMT 178
Query: 264 XXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 323
D P KD R R Q+IIP++TGAAKA+ KVLP LNGKL GMA RVP
Sbjct: 179 TVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVP 237
Query: 324 TPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 383
TPNVS+VDL + + + E + A K + G+LKGI+ +++E +VS DF ++ S+I D
Sbjct: 238 TPNVSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIID 297
Query: 384 AKAGIGLSASFMKLVSWYDNEWGYSNR 410
+ + + +K+++WYDNEWGYS R
Sbjct: 298 GLSTMVMGDRKVKVLAWYDNEWGYSRR 324
>pdb|1RM3|O Chain O, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|A Chain A, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|B Chain B, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 202/332 (60%), Gaps = 5/332 (1%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDAG-GVKQASHLLKYDSILGTFDADVKT 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
DS + ++GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 AGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 121
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 TAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 181
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
D S +D R R A NI+P+STGAAKAV VLP+L GKL G+A RVPTPNV
Sbjct: 182 YTGDQRLLDA-SHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 240
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDL +++K E+V AA + +++ LKGIL DE +VS DF SS D+
Sbjct: 241 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLT 300
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ + +K+++WYDNEWGYS RV+DL + +A
Sbjct: 301 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 332
>pdb|1NBO|O Chain O, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|A Chain A, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|B Chain B, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1RM4|O Chain O, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|A Chain A, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|B Chain B, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|2HKI|A Chain A, Crystal Structure Of Photosynthetic
Glyceraldehyde-3-Phosphate Dehydrogenase A4 Isoform
pdb|2PKQ|P Chain P, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|R Chain R, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|S Chain S, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 337
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 202/332 (60%), Gaps = 5/332 (1%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVKT 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
DS + ++GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 AGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 121
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 TAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 181
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
D S +D R R A NI+P+STGAAKAV VLP+L GKL G+A RVPTPNV
Sbjct: 182 YTGDQRLLDA-SHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 240
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDL +++K E+V AA + +++ LKGIL DE +VS DF SS D+
Sbjct: 241 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLT 300
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ + +K+++WYDNEWGYS RV+DL + +A
Sbjct: 301 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 332
>pdb|1VC2|A Chain A, Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Thermus Thermophilus Hb8
Length = 331
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/328 (47%), Positives = 205/328 (62%), Gaps = 7/328 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND D K +A++ KYDST+G F G + D
Sbjct: 2 KVGINGFGRIGR-QVFRILHERGVEVALIND-LTDNKTLAHLLKYDSTYGRFPGAVGY-D 58
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L ++GK I+ + +DP EIPW GV VVES+GVFT KA AH++ GAKKV+I+A
Sbjct: 59 EENLYVDGKAIRATAIKDPREIPWKQAGVGVVVESTGVFTDGEKARAHLEAGAKKVIITA 118
Query: 211 PSADAPMFVV-GVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + VV GVN + Y P +I+SNASCTTN LAP+ KV+ + FG+ + LM
Sbjct: 119 PAKNEDITVVLGVNHEQYDPAKHHILSNASCTTNSLAPVMKVLEKAFGVEKALMTTVHSY 178
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P KD R R A+ NIIP++TGAAKA VLP L G+ GMA RVPTP S
Sbjct: 179 TNDQRLLDLPH-KDLRRARAAALNIIPTTTGAAKATALVLPSLKGRFDGMALRVPTPTGS 237
Query: 329 VVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGI 388
+ D+T L + + E+V AA+K A+EG LKGIL YT++++V D V D SSI D K
Sbjct: 238 ISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLRDIVMDPHSSIVDGKLTK 297
Query: 389 GLSASFMKLVSWYDNEWGYSNRVLDLIE 416
+ + +K+ +WYDNEWGY+NRV DL+E
Sbjct: 298 AI-GNLVKVFAWYDNEWGYANRVADLVE 324
>pdb|2PKR|O Chain O, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|R Chain R, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|P Chain P, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|Q Chain Q, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|A Chain A, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|B Chain B, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|C Chain C, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|D Chain D, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|H Chain H, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|I Chain I, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|L Chain L, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|M Chain M, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
Length = 365
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 202/332 (60%), Gaps = 5/332 (1%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVKT 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
DS + ++GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 AGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 121
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 TAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 181
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
D S +D R R A NI+P+STGAAKAV VLP+L GKL G+A RVPTPNV
Sbjct: 182 YTGDQRLLDA-SHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 240
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDL +++K E+V AA + +++ LKGIL DE +VS DF SS D+
Sbjct: 241 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLT 300
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ + +K+++WYDNEWGYS RV+DL + +A
Sbjct: 301 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 332
>pdb|1RM5|O Chain O, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|A Chain A, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|B Chain B, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 268 bits (685), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 202/332 (60%), Gaps = 5/332 (1%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVKT 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
DS + ++GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 AGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 121
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 TAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 181
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
D + +D R R A NI+P+STGAAKAV VLP+L GKL G+A RVPTPNV
Sbjct: 182 YTGDQRLLDA-AHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 240
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDL +++K E+V AA + +++ LKGIL DE +VS DF SS D+
Sbjct: 241 SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLT 300
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ + +K+++WYDNEWGYS RV+DL + +A
Sbjct: 301 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 332
>pdb|3DOC|A Chain A, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|B Chain B, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|C Chain C, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|D Chain D, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
Length = 335
Score = 267 bits (683), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 206/330 (62%), Gaps = 14/330 (4%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR L ND + A++ +YDS HG F + V
Sbjct: 4 RVAINGFGRIGRNILRAIVESGRTDIQVVAIND-LGPVETNAHLLRYDSVHGRFPKEVEV 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D T+++ IKV + R+PAE+PW + VD +E +G+FT+ KA+ H++ GAK+V++
Sbjct: 63 AGD-TIDVGYGPIKVHAVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIV 121
Query: 209 SAPSADAPMFVV-GVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
SAP+ A + VV GVN + ++SNASCTTNCLAP+A+V+++ GI +G M
Sbjct: 122 SAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLAPVAQVLNDTIGIEKGFMTTIHS 181
Query: 268 XXXXXXXXDGPSM----KDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 323
D P++ KD R A+ ++IP+STGAAKAVG VLP+L GKL G+A RVP
Sbjct: 182 YTG-----DQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVP 236
Query: 324 TPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 383
TPNVSVVDLT + + E+V AI+ A+ G LKGILGYTDE +VS+DF DS SS+F
Sbjct: 237 TPNVSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTDEKLVSHDFNHDSHSSVFH 296
Query: 384 AKAGIGLSASFMKLVSWYDNEWGYSNRVLD 413
+ + ++++SWYDNEWG+S+R+ D
Sbjct: 297 TDQTKVMDGTMVRILSWYDNEWGFSSRMSD 326
>pdb|2G82|O Chain O, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|P Chain P, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|Q Chain Q, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|R Chain R, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|A Chain A, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|B Chain B, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|C Chain C, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|D Chain D, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
Length = 331
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/328 (47%), Positives = 204/328 (62%), Gaps = 7/328 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND D K +A++ KYDS + F G + D
Sbjct: 2 KVGINGFGRIGR-QVFRILHSRGVEVALIND-LTDNKTLAHLLKYDSIYHRFPGEV-AYD 58
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L ++GK I+ + +DP EIPW + GV V+ES+GVFT KA AH++GGAKKV+I+A
Sbjct: 59 DQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITA 118
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + V+GVN + Y P+ +I+SNAS TTN LAP+ KV+ E FG+ + LM
Sbjct: 119 PAKGEDITIVMGVNHEAYDPSRHHIISNASXTTNSLAPVMKVLEEAFGVEKALMTTVHSY 178
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P KD R R A+ NIIP++TGAAKA VLP L G+ GMA RVPT S
Sbjct: 179 TNDQRLLDLPH-KDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGS 237
Query: 329 VVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGI 388
+ D+T L + + E+V AA+K A+EG LKGIL YT++++V D V D SSI DAK
Sbjct: 238 ISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTK 297
Query: 389 GLSASFMKLVSWYDNEWGYSNRVLDLIE 416
L + +K+ +WYDNEWGY+NRV DL+E
Sbjct: 298 AL-GNMVKVFAWYDNEWGYANRVADLVE 324
>pdb|1JN0|O Chain O, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|A Chain A, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|B Chain B, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
Length = 335
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/330 (45%), Positives = 198/330 (60%), Gaps = 3/330 (0%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGR + K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAG 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
DS + + GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I+A
Sbjct: 63 DSAISV-GKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 PGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYT 181
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329
D S +D R R A NI+P+STGAAKAV VLP L GKL G+A RVPTPNVSV
Sbjct: 182 GDQRLLDA-SHRDLRRARAACLNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSV 240
Query: 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIG 389
VDL +++K E+V AA + +++ LKGIL DE +VS DF SS D+ +
Sbjct: 241 VDLVVQVSKKTFAEEVNAAFRESADQELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMV 300
Query: 390 LSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ +K+++WYDNEWGYS RV+DL + +A
Sbjct: 301 MGDDMVKVIAWYDNEWGYSQRVVDLADIVA 330
>pdb|1OBF|O Chain O, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution.
pdb|1OBF|P Chain P, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution
Length = 335
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 200/327 (61%), Gaps = 7/327 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V ING+GRIGR L + D K A++ +YD+ HG F GT++V
Sbjct: 3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSV 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
+ S + +NG I+V + R+PA++PWG VD V+E +G FTT KA AH+KGGAKKV+I
Sbjct: 63 -NGSYMVVNGDKIRVDANRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVII 121
Query: 209 SAPS-ADAPMFVV-GVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXX 266
SAP AD VV GVN T K ++SNAS TTNCLAPL K ++++ G+ +GLM
Sbjct: 122 SAPGGADVDATVVYGVNHGTLKSTDTVISNASXTTNCLAPLVKPLNDKLGLQDGLMTTVH 181
Query: 267 XXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPN 326
D +D R R A+ ++IP+ TGAA AVG VLP+L+GKL G A RVPT N
Sbjct: 182 AYTNNQVLTD-VYHEDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPTIN 240
Query: 327 VSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKA 386
VS+VDL+ + + E+V +K ASEG LKGIL Y E +VS D+ D SS DA
Sbjct: 241 VSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYNTEPLVSVDYNHDPASSTVDASL 300
Query: 387 GIGLSASFMKLVSWYDNEWGYSNRVLD 413
+S +K+ SWYDNEWG+SNR+LD
Sbjct: 301 -TKVSGRLVKVSSWYDNEWGFSNRMLD 326
>pdb|2D2I|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|B Chain B, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|O Chain O, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|P Chain P, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|Q Chain Q, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|R Chain R, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2DUU|A Chain A, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|B Chain B, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|O Chain O, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|P Chain P, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|Q Chain Q, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|R Chain R, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp
Length = 380
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 211/334 (63%), Gaps = 8/334 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR L N+ DA+ A++ +YDS G F I+
Sbjct: 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTS-DARTAAHLLEYDSVLGRFNADISY 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D++++ +NGK +K+ R+P +PW ++ +D V+ES+GVF T AS H++ GAKKV+I
Sbjct: 63 -DENSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121
Query: 209 SAP--SADAPMFVVGVNEKTYK-PNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
+AP + +V+GVN+ Y+ + ++SNASCTTNCLAP+AKV+H+ FGI++G M
Sbjct: 122 TAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTT 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325
D S +D R R A+ NI+P++TGAAKAV V+P+L GKL G+A RVPTP
Sbjct: 182 HSYTLDQRILDA-SHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTP 240
Query: 326 NVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAK 385
NVSVVDL ++ K E V ++ AS+ ++KGI+ Y+D +VS+DF G SSI D+
Sbjct: 241 NVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSS 300
Query: 386 AGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ + +K+++WYDNEWGYS RV+DL E A
Sbjct: 301 LTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAA 334
>pdb|3B1J|A Chain A, Crystal Structure Of Dehydrogenese
pdb|3B1J|B Chain B, Crystal Structure Of Dehydrogenese
pdb|3B1K|A Chain A, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|B Chain B, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|G Chain G, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|H Chain H, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B20|A Chain A, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|B Chain B, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|O Chain O, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|P Chain P, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|Q Chain Q, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|R Chain R, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
Length = 339
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 211/334 (63%), Gaps = 8/334 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR L N+ DA+ A++ +YDS G F I+
Sbjct: 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTS-DARTAAHLLEYDSVLGRFNADISY 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D++++ +NGK +K+ R+P +PW ++ +D V+ES+GVF T AS H++ GAKKV+I
Sbjct: 63 -DENSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121
Query: 209 SAPSADAPM--FVVGVNEKTYK-PNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
+AP + +V+GVN+ Y+ + ++SNASCTTNCLAP+AKV+H+ FGI++G M
Sbjct: 122 TAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTT 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325
D S +D R R A+ NI+P++TGAAKAV V+P+L GKL G+A RVPTP
Sbjct: 182 HSYTLDQRILDA-SHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTP 240
Query: 326 NVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAK 385
NVSVVDL ++ K E V ++ AS+ ++KGI+ Y+D +VS+DF G SSI D+
Sbjct: 241 NVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSS 300
Query: 386 AGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ + +K+++WYDNEWGYS RV+DL E A
Sbjct: 301 LTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAA 334
>pdb|3K2B|A Chain A, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|B Chain B, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|C Chain C, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|D Chain D, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|E Chain E, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|F Chain F, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|G Chain G, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|H Chain H, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|O Chain O, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|Q Chain Q, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3QV1|A Chain A, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|B Chain B, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|C Chain C, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|D Chain D, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|E Chain E, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|F Chain F, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3RVD|A Chain A, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|B Chain B, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|C Chain C, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|D Chain D, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|E Chain E, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|F Chain F, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|G Chain G, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|H Chain H, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|O Chain O, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|Q Chain Q, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana
Length = 337
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 204/332 (61%), Gaps = 5/332 (1%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDST G+F +
Sbjct: 4 KVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADVKP 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
++ + ++GK+I+V S R+P+ +PW + G+D V+E +GVF A H++ GAKKV+I
Sbjct: 63 SGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVII 122
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVN Y + I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 123 TAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 182
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327
D S +D R R A+ NI+P+STGAAKAV VLP+L GKL G+A RVPTPNV
Sbjct: 183 YTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV 241
Query: 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
SVVDL +++K E+V AA + ++E LKGIL DE +VS DF S+ D+
Sbjct: 242 SVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLT 301
Query: 388 IGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+ + +K+++WYDNEWGYS RV+DL + +A
Sbjct: 302 MVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 333
>pdb|3VAZ|P Chain P, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|R Chain R, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|O Chain O, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|Q Chain Q, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|B Chain B, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|A Chain A, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
Length = 344
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 198/335 (59%), Gaps = 12/335 (3%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 12 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 70
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 71 GG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 129
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 130 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 189
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P K D R R A++NIIP+STGAAKA+GKV+P+++GKL G A RVP S
Sbjct: 190 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGS 249
Query: 329 VVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
+ +LT L K + E V A+K AS S GYT++++VS+D VG + S+FDA
Sbjct: 250 LTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQT 305
Query: 388 IGLSA---SFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+S +K+ +WYDNE Y+ +++ + ++A
Sbjct: 306 RVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLA 340
>pdb|3LVF|P Chain P, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|R Chain R, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|O Chain O, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|Q Chain Q, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
Length = 338
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 198/335 (59%), Gaps = 12/335 (3%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 6 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 64
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 65 GG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 123
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 124 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 183
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P K D R R A++NIIP+STGAAKA+GKV+P+++GKL G A RVP S
Sbjct: 184 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGS 243
Query: 329 VVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
+ +LT L K + E V A+K AS S GYT++++VS+D VG + S+FDA
Sbjct: 244 LTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQT 299
Query: 388 IGLSA---SFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+S +K+ +WYDNE Y+ +++ + ++A
Sbjct: 300 RVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLA 334
>pdb|3LC7|O Chain O, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|R Chain R, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|Q Chain Q, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|P Chain P, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
Length = 339
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 198/335 (59%), Gaps = 12/335 (3%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 7 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 65
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 66 GG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 124
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 125 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 184
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P K D R R A++NIIP+STGAAKA+GKV+P+++GKL G A RVP S
Sbjct: 185 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGS 244
Query: 329 VVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
+ +LT L K + E V A+K AS S GYT++++VS+D VG + S+FDA
Sbjct: 245 LTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQT 300
Query: 388 IGLSA---SFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+S +K+ +WYDNE Y+ +++ + ++A
Sbjct: 301 RVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLA 335
>pdb|3LC1|P Chain P, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|R Chain R, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|O Chain O, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|Q Chain Q, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution
Length = 336
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 198/335 (59%), Gaps = 12/335 (3%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 GG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTINAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P K D R R A++NIIP+STGAAKA+GKV+P+++GKL G A RVP S
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGS 241
Query: 329 VVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
+ +LT L K + E V A+K AS S GYT++++VS+D VG + S+FDA
Sbjct: 242 LTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQT 297
Query: 388 IGLSA---SFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+S +K+ +WYDNE Y+ +++ + ++A
Sbjct: 298 RVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLA 332
>pdb|3K73|Q Chain Q, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|O Chain O, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|P Chain P, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|R Chain R, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3L6O|Q Chain Q, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|P Chain P, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|R Chain R, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|O Chain O, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3LC2|O Chain O, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|Q Chain Q, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|R Chain R, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|P Chain P, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
Length = 336
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 198/335 (59%), Gaps = 12/335 (3%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 GG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P K D R R A++NIIP+STGAAKA+GKV+P+++GKL G A RVP S
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGS 241
Query: 329 VVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
+ +LT L K + E V A+K AS S GYT++++VS+D VG + S+FDA
Sbjct: 242 LTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQT 297
Query: 388 IGLSA---SFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+S +K+ +WYDNE Y+ +++ + ++A
Sbjct: 298 RVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLA 332
>pdb|3KSD|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSZ|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
Length = 336
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/335 (41%), Positives = 197/335 (58%), Gaps = 12/335 (3%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 GG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS AS TTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASSTTNSLAPVAKVLNDDFGLVEGLMTTINAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P K D R R A++NIIP+STGAAKA+GKV+P+++GKL G A RVP S
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGS 241
Query: 329 VVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
+ +LT L K + E V A+K AS S GYT++++VS+D VG + S+FDA
Sbjct: 242 LTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQT 297
Query: 388 IGLSA---SFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+S +K+ +WYDNE Y+ +++ + ++A
Sbjct: 298 RVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLA 332
>pdb|3HQ4|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3KV3|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
Length = 336
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/335 (41%), Positives = 197/335 (58%), Gaps = 12/335 (3%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 GG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS AS TTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASSTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P K D R R A++NIIP+STGAAKA+GKV+P+++GKL G A RVP S
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGS 241
Query: 329 VVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
+ +LT L K + E V A+K AS S GYT++++VS+D VG + S+FDA
Sbjct: 242 LTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQT 297
Query: 388 IGLSA---SFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+S +K+ +WYDNE Y+ +++ + ++A
Sbjct: 298 RVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLA 332
>pdb|3K9Q|Q Chain Q, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|O Chain O, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|P Chain P, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|R Chain R, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3L4S|Q Chain Q, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|P Chain P, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|O Chain O, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|R Chain R, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
Length = 336
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/335 (41%), Positives = 197/335 (58%), Gaps = 12/335 (3%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 GG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS AS TTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASGTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVS 328
D P K D R R A++NIIP+STGAAKA+GKV+P+++GKL G A RVP S
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGS 241
Query: 329 VVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAG 387
+ +LT L K + E V A+K AS S GYT++++VS+D VG + S+FDA
Sbjct: 242 LTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQT 297
Query: 388 IGLSA---SFMKLVSWYDNEWGYSNRVLDLIEHMA 419
+S +K+ +WYDNE Y+ +++ + ++A
Sbjct: 298 RVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLA 332
>pdb|2XF8|A Chain A, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|B Chain B, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|C Chain C, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|D Chain D, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|E Chain E, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|F Chain F, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|G Chain G, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|H Chain H, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|I Chain I, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|J Chain J, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|K Chain K, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|L Chain L, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|M Chain M, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|N Chain N, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|O Chain O, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|P Chain P, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
Length = 338
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 174/337 (51%), Gaps = 8/337 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR + + DA MA++ KYD++HG F +
Sbjct: 3 RVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D L + I+V +R +PW + GVD V++ +GV+ + AH+ GAKKV+
Sbjct: 63 ERDQ-LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLF 121
Query: 209 SAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
S P + DA + V GVN+ + IVSNASCTTNC+ P+ K++ + +GI G +
Sbjct: 122 SHPGSNDLDATV-VYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTI 180
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325
D D R R ASQ+IIP T A + + P N + +A RVPT
Sbjct: 181 HSAMHDQQVIDA-YHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTI 239
Query: 326 NVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAK 385
NV+ +DL+ + K +V ++ A++G+ GI+ YT+ +VS DF D S+I D
Sbjct: 240 NVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGT 299
Query: 386 AGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMALVA 422
A +K + W DNEWG++NR+LD MA VA
Sbjct: 300 QTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMATVA 336
>pdb|2X5J|O Chain O, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|P Chain P, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|Q Chain Q, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|R Chain R, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 174/337 (51%), Gaps = 8/337 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR + + DA MA++ KYD++HG F +
Sbjct: 4 RVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ 63
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D L + I+V +R +PW + GVD V++ +GV+ + AH+ GAKKV+
Sbjct: 64 ERDQ-LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLF 122
Query: 209 SAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
S P + DA + V GVN+ + IVSNASCTTNC+ P+ K++ + +GI G +
Sbjct: 123 SHPGSNDLDATV-VYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTI 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325
D D R R ASQ+IIP T A + + P N + +A RVPT
Sbjct: 182 HSAMHDQQVIDA-YHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTI 240
Query: 326 NVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAK 385
NV+ +DL+ + K +V ++ A++G+ GI+ YT+ +VS DF D S+I D
Sbjct: 241 NVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGT 300
Query: 386 AGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMALVA 422
A +K + W DNEWG++NR+LD MA VA
Sbjct: 301 QTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMATVA 337
>pdb|2X5K|O Chain O, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|P Chain P, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|Q Chain Q, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|R Chain R, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 172/337 (51%), Gaps = 8/337 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR + + DA MA++ KYD++HG F +
Sbjct: 4 RVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ 63
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D L + I+V +R +PW + GVD V++ +GV+ + AH+ GAKKV+
Sbjct: 64 ERDQ-LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLF 122
Query: 209 SAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
S P + DA + V GVN+ + IVSNAS TTN + P+ K++ + +GI G +
Sbjct: 123 SHPGSNDLDATV-VYGVNQDQLRAEHRIVSNASATTNSIIPVIKLLDDAYGIESGTVTTI 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325
D D R R ASQ+IIP T A + + P N + +A RVPT
Sbjct: 182 HSAMHDQQVIDA-YHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTI 240
Query: 326 NVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAK 385
NV+ +DL+ + K +V ++ A++G+ GI+ YT+ +VS DF D S+I D
Sbjct: 241 NVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGT 300
Query: 386 AGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMALVA 422
A +K + W DNEWG++NR+LD MA VA
Sbjct: 301 QTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMATVA 337
>pdb|2YV3|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
pdb|2YV3|B Chain B, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
Length = 331
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 172 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKT 226
+P G VD V+ S+G + AKA +GGA +V+ SA P+ V VN +
Sbjct: 55 LPEGPLPVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREK 112
Query: 227 YKPNMNIVSNASCTTNCLAPLAKVVHEEF 255
+ I++N +CTT LA +H F
Sbjct: 113 IFQHRGIIANPNCTTAILAMALWPLHRAF 141
>pdb|3TZ6|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Inhibitor Smcs (Cys) And Phosphate From
Mycobacterium Tuberculosis H37rv
Length = 344
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 178 GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVN--EKTYKPN 230
G+D + S+G + ++K A A VI SA D P+ V VN ++
Sbjct: 63 GLDIALFSAG--SAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRP 120
Query: 231 MNIVSNASCTTNCLAPLAKVVHEE 254
I++N +CTT P+ KV+H+E
Sbjct: 121 KGIIANPNCTTMAAMPVLKVLHDE 144
>pdb|3VOS|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Glycerol And Sulfate From Mycobacterium
Tuberculosis H37rv
Length = 362
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 178 GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVN--EKTYKPN 230
G+D + S+G + ++K A A VI SA D P+ V VN ++
Sbjct: 81 GLDIALFSAG--SAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRP 138
Query: 231 MNIVSNASCTTNCLAPLAKVVHEE 254
I++N +CTT P+ KV+H+E
Sbjct: 139 KGIIANPNCTTMAAMPVLKVLHDE 162
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Query: 141 VFKGTINVVDDSTLEINGK-------LIKVFSKRDPAEIPWGDYGVDYVVESSGVF 189
V KG VD TLE+NG+ LI + +IP GV+Y ++S G F
Sbjct: 110 VIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIP----GVEYGIDSDGFF 161
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Query: 141 VFKGTINVVDDSTLEINGK-------LIKVFSKRDPAEIPWGDYGVDYVVESSGVF 189
V KG VD TLE+NG+ LI + +IP GV+Y ++S G F
Sbjct: 110 VIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIP----GVEYGIDSDGFF 161
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,902,863
Number of Sequences: 62578
Number of extensions: 411049
Number of successful extensions: 1287
Number of sequences better than 100.0: 76
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 924
Number of HSP's gapped (non-prelim): 76
length of query: 425
length of database: 14,973,337
effective HSP length: 102
effective length of query: 323
effective length of database: 8,590,381
effective search space: 2774693063
effective search space used: 2774693063
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)