Query 014424
Match_columns 425
No_of_seqs 250 out of 1671
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 11:20:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014424.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014424hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 2E-121 5E-126 915.7 36.9 330 90-420 2-331 (332)
2 3v1y_O PP38, glyceraldehyde-3- 100.0 2E-121 5E-126 917.2 35.0 334 89-422 3-337 (337)
3 4dib_A GAPDH, glyceraldehyde 3 100.0 2E-120 5E-125 910.9 34.1 333 89-424 4-338 (345)
4 3h9e_O Glyceraldehyde-3-phosph 100.0 5E-120 2E-124 909.2 37.6 334 89-424 7-341 (346)
5 3doc_A Glyceraldehyde 3-phosph 100.0 4E-120 1E-124 906.4 34.6 330 88-420 1-333 (335)
6 3ids_C GAPDH, glyceraldehyde-3 100.0 2E-120 6E-125 914.7 31.3 336 88-423 1-355 (359)
7 3lvf_P GAPDH 1, glyceraldehyde 100.0 5E-118 2E-122 891.3 34.4 330 87-422 2-337 (338)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 3E-117 1E-121 889.9 29.2 330 87-420 19-356 (356)
9 2b4r_O Glyceraldehyde-3-phosph 100.0 1E-115 4E-120 878.8 33.2 333 87-420 9-344 (345)
10 1obf_O Glyceraldehyde 3-phosph 100.0 6E-115 2E-119 872.2 35.8 328 90-421 2-334 (335)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 6E-115 2E-119 873.3 30.3 330 88-421 1-340 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 7E-108 2E-112 821.8 33.9 328 90-422 1-330 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 3E-107 9E-112 829.0 35.2 331 88-421 1-336 (380)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 2E-106 6E-111 812.7 36.2 331 89-421 1-334 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 1E-105 5E-110 807.4 37.3 331 88-421 1-336 (339)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 3E-105 1E-109 803.6 35.1 329 90-421 2-332 (334)
17 3cps_A Glyceraldehyde 3-phosph 100.0 4E-105 1E-109 807.2 33.4 334 87-421 15-352 (354)
18 3e5r_O PP38, glyceraldehyde-3- 100.0 2E-104 7E-109 798.5 35.5 335 87-421 1-336 (337)
19 1hdg_O Holo-D-glyceraldehyde-3 100.0 4E-104 1E-108 795.1 34.4 328 90-420 1-331 (332)
20 1gad_O D-glyceraldehyde-3-phos 100.0 5E-104 2E-108 793.8 33.3 328 89-419 1-329 (330)
21 1u8f_O GAPDH, glyceraldehyde-3 100.0 3E-103 1E-107 789.6 34.5 334 87-421 1-334 (335)
22 2x5j_O E4PDH, D-erythrose-4-ph 100.0 4E-103 1E-107 789.6 31.5 331 88-421 1-336 (339)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 4.3E-59 1.5E-63 470.1 15.4 240 88-355 1-253 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 1.4E-48 4.8E-53 391.6 24.3 290 90-420 1-329 (331)
25 2hjs_A USG-1 protein homolog; 100.0 1.1E-48 3.8E-53 393.5 23.3 300 88-421 5-336 (340)
26 2r00_A Aspartate-semialdehyde 100.0 9.5E-48 3.3E-52 386.2 27.0 298 89-420 3-333 (336)
27 1cf2_P Protein (glyceraldehyde 100.0 2.3E-49 7.7E-54 398.2 10.4 273 89-404 1-285 (337)
28 1b7g_O Protein (glyceraldehyde 100.0 1.3E-45 4.4E-50 371.3 15.4 225 90-354 2-245 (340)
29 2czc_A Glyceraldehyde-3-phosph 100.0 2.9E-45 1E-49 367.2 13.0 237 88-356 1-245 (334)
30 1t4b_A Aspartate-semialdehyde 100.0 1.9E-45 6.6E-50 373.7 9.1 237 90-353 2-299 (367)
31 1xyg_A Putative N-acetyl-gamma 100.0 2.4E-42 8.1E-47 349.9 17.5 295 89-420 16-345 (359)
32 2ep5_A 350AA long hypothetical 100.0 4.5E-43 1.5E-47 353.7 11.5 239 89-354 4-270 (350)
33 1ys4_A Aspartate-semialdehyde 100.0 4.9E-42 1.7E-46 346.3 12.9 249 87-361 6-283 (354)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 3.2E-39 1.1E-43 325.3 17.2 293 89-420 4-331 (345)
35 4dpk_A Malonyl-COA/succinyl-CO 100.0 9.5E-39 3.3E-43 323.7 20.1 306 88-421 6-354 (359)
36 4dpl_A Malonyl-COA/succinyl-CO 100.0 9.5E-39 3.3E-43 323.7 18.6 306 88-421 6-354 (359)
37 3pwk_A Aspartate-semialdehyde 100.0 7.3E-37 2.5E-41 310.5 22.7 298 88-420 1-343 (366)
38 3hsk_A Aspartate-semialdehyde 100.0 5.3E-38 1.8E-42 320.4 13.0 244 87-355 17-301 (381)
39 3uw3_A Aspartate-semialdehyde 100.0 5.3E-38 1.8E-42 319.9 10.0 290 90-419 5-375 (377)
40 3pzr_A Aspartate-semialdehyde 100.0 1E-37 3.5E-42 317.1 10.7 293 90-420 1-368 (370)
41 3tz6_A Aspartate-semialdehyde 100.0 7.7E-36 2.6E-40 300.8 23.8 293 90-419 2-341 (344)
42 3dr3_A N-acetyl-gamma-glutamyl 100.0 8.5E-36 2.9E-40 299.8 17.3 288 90-420 5-329 (337)
43 2nqt_A N-acetyl-gamma-glutamyl 100.0 8.3E-35 2.8E-39 294.1 16.9 297 89-420 9-338 (352)
44 1vkn_A N-acetyl-gamma-glutamyl 100.0 2.7E-30 9.1E-35 261.0 12.5 289 89-420 13-337 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.5 1.1E-07 3.6E-12 94.4 6.2 149 89-267 4-161 (312)
46 1f06_A MESO-diaminopimelate D- 97.9 2.3E-05 8E-10 77.3 8.7 90 88-212 2-91 (320)
47 4hkt_A Inositol 2-dehydrogenas 97.8 3.7E-05 1.3E-09 75.3 7.7 94 88-211 2-95 (331)
48 3kux_A Putative oxidoreductase 97.8 5.8E-05 2E-09 74.8 8.6 92 89-211 7-99 (352)
49 3bio_A Oxidoreductase, GFO/IDH 97.7 3.9E-05 1.3E-09 75.1 7.0 87 89-209 9-95 (304)
50 3ezy_A Dehydrogenase; structur 97.7 4.6E-05 1.6E-09 75.2 7.2 97 88-212 1-97 (344)
51 3ec7_A Putative dehydrogenase; 97.7 6.6E-05 2.3E-09 74.8 7.9 101 85-212 19-120 (357)
52 3i23_A Oxidoreductase, GFO/IDH 97.6 9.4E-05 3.2E-09 73.2 8.2 96 88-211 1-97 (349)
53 3mz0_A Inositol 2-dehydrogenas 97.6 0.0001 3.5E-09 72.7 8.3 98 88-212 1-99 (344)
54 3db2_A Putative NADPH-dependen 97.6 0.00014 4.7E-09 72.0 8.5 97 87-212 3-99 (354)
55 3euw_A MYO-inositol dehydrogen 97.6 0.00018 6E-09 70.8 8.8 94 89-211 4-97 (344)
56 3ohs_X Trans-1,2-dihydrobenzen 97.6 0.00013 4.4E-09 71.6 7.7 97 88-212 1-99 (334)
57 3uuw_A Putative oxidoreductase 97.6 0.00014 4.6E-09 70.6 7.7 96 86-212 3-99 (308)
58 4f3y_A DHPR, dihydrodipicolina 97.5 9.3E-05 3.2E-09 72.0 6.3 144 89-266 7-160 (272)
59 3mtj_A Homoserine dehydrogenas 97.5 0.00013 4.3E-09 75.8 7.7 94 87-211 7-111 (444)
60 3rc1_A Sugar 3-ketoreductase; 97.5 0.00016 5.5E-09 71.7 7.8 94 89-211 27-121 (350)
61 3gdo_A Uncharacterized oxidore 97.5 0.0002 6.8E-09 71.2 8.2 92 89-211 5-97 (358)
62 3e9m_A Oxidoreductase, GFO/IDH 97.5 0.00013 4.6E-09 71.6 6.9 96 88-211 4-99 (330)
63 4had_A Probable oxidoreductase 97.4 0.00023 7.9E-09 70.0 8.0 94 90-211 24-118 (350)
64 3e18_A Oxidoreductase; dehydro 97.4 0.00034 1.2E-08 69.6 8.7 94 89-212 5-98 (359)
65 3e82_A Putative oxidoreductase 97.4 0.00031 1.1E-08 70.0 8.2 92 89-211 7-99 (364)
66 3f4l_A Putative oxidoreductase 97.4 0.00019 6.4E-09 70.9 6.4 96 88-212 1-98 (345)
67 3ijp_A DHPR, dihydrodipicolina 97.4 0.00025 8.6E-09 69.6 7.1 97 88-208 20-117 (288)
68 2ho3_A Oxidoreductase, GFO/IDH 97.4 0.00049 1.7E-08 67.1 9.1 94 89-211 1-94 (325)
69 3qy9_A DHPR, dihydrodipicolina 97.3 0.0002 6.7E-09 68.6 5.8 33 89-122 3-35 (243)
70 1h6d_A Precursor form of gluco 97.3 0.00072 2.5E-08 69.2 10.1 99 89-211 83-182 (433)
71 2dc1_A L-aspartate dehydrogena 97.3 9.3E-05 3.2E-09 69.4 3.2 135 90-268 1-136 (236)
72 3ic5_A Putative saccharopine d 97.3 0.00046 1.6E-08 56.0 7.0 98 88-210 4-101 (118)
73 3cea_A MYO-inositol 2-dehydrog 97.3 0.00048 1.6E-08 67.5 8.3 95 89-211 8-103 (346)
74 1ydw_A AX110P-like protein; st 97.3 0.00037 1.3E-08 69.1 7.6 98 89-211 6-103 (362)
75 4ew6_A D-galactose-1-dehydroge 97.3 0.00019 6.4E-09 70.9 5.3 87 89-211 25-113 (330)
76 3evn_A Oxidoreductase, GFO/IDH 97.3 0.0002 6.9E-09 70.2 5.1 96 89-212 5-100 (329)
77 3fhl_A Putative oxidoreductase 97.2 0.00028 9.6E-09 70.2 5.9 92 89-211 5-97 (362)
78 1p9l_A Dihydrodipicolinate red 97.2 0.001 3.5E-08 63.6 9.6 120 90-266 1-132 (245)
79 4h3v_A Oxidoreductase domain p 97.2 0.00027 9.2E-09 69.6 5.7 98 87-212 4-108 (390)
80 2ixa_A Alpha-N-acetylgalactosa 97.2 0.0006 2.1E-08 69.8 8.3 102 88-211 19-123 (444)
81 4gqa_A NAD binding oxidoreduct 97.2 0.00029 1E-08 71.1 5.9 96 89-212 26-129 (412)
82 3q2i_A Dehydrogenase; rossmann 97.2 0.00054 1.8E-08 67.7 7.5 94 89-211 13-107 (354)
83 2ejw_A HDH, homoserine dehydro 97.2 0.0007 2.4E-08 67.6 8.3 85 89-208 3-96 (332)
84 3moi_A Probable dehydrogenase; 97.2 0.00036 1.2E-08 70.1 6.1 95 88-211 1-96 (387)
85 1xea_A Oxidoreductase, GFO/IDH 97.2 0.0012 4.2E-08 64.3 9.7 94 88-211 1-95 (323)
86 3ing_A Homoserine dehydrogenas 97.2 0.0018 6.1E-08 64.4 10.5 34 89-122 4-43 (325)
87 3m2t_A Probable dehydrogenase; 97.1 0.0006 2E-08 67.9 6.9 96 89-212 5-101 (359)
88 3c1a_A Putative oxidoreductase 97.1 0.00035 1.2E-08 67.9 5.0 93 89-212 10-102 (315)
89 1tlt_A Putative oxidoreductase 97.1 0.00076 2.6E-08 65.6 7.2 92 89-211 5-97 (319)
90 3do5_A HOM, homoserine dehydro 97.1 0.00094 3.2E-08 66.4 7.6 34 89-122 2-43 (327)
91 3c8m_A Homoserine dehydrogenas 97.1 0.00074 2.5E-08 67.1 6.7 34 89-122 6-46 (331)
92 1j5p_A Aspartate dehydrogenase 96.9 0.00081 2.8E-08 64.9 5.5 79 90-209 13-91 (253)
93 1zh8_A Oxidoreductase; TM0312, 96.9 0.0015 5.1E-08 64.4 7.3 96 89-212 18-115 (340)
94 3u3x_A Oxidoreductase; structu 96.9 0.0011 3.7E-08 66.1 6.0 95 89-212 26-121 (361)
95 4fb5_A Probable oxidoreductase 96.8 0.0024 8.2E-08 62.8 8.2 96 89-212 25-127 (393)
96 2glx_A 1,5-anhydro-D-fructose 96.8 0.0026 9E-08 61.8 8.1 93 90-211 1-94 (332)
97 3ip3_A Oxidoreductase, putativ 96.8 0.00079 2.7E-08 66.1 4.2 98 88-212 1-100 (337)
98 1lc0_A Biliverdin reductase A; 96.8 0.0023 7.8E-08 62.0 7.4 89 89-212 7-98 (294)
99 3upl_A Oxidoreductase; rossman 96.6 0.0027 9.1E-08 65.9 6.8 109 89-208 23-137 (446)
100 1dih_A Dihydrodipicolinate red 96.6 0.003 1E-07 61.1 6.7 98 89-210 5-103 (273)
101 2nvw_A Galactose/lactose metab 96.6 0.0033 1.1E-07 65.4 7.3 99 89-212 39-147 (479)
102 3dty_A Oxidoreductase, GFO/IDH 96.6 0.0037 1.3E-07 62.9 7.5 97 89-211 12-117 (398)
103 1r0k_A 1-deoxy-D-xylulose 5-ph 96.6 0.0015 5.2E-08 66.6 4.6 110 89-209 4-123 (388)
104 3o9z_A Lipopolysaccaride biosy 96.5 0.0031 1.1E-07 61.6 5.9 93 90-211 4-104 (312)
105 3v5n_A Oxidoreductase; structu 96.4 0.0059 2E-07 62.0 8.1 97 89-211 37-142 (417)
106 2p2s_A Putative oxidoreductase 96.3 0.0066 2.3E-07 59.3 7.3 95 89-212 4-99 (336)
107 3oa2_A WBPB; oxidoreductase, s 96.3 0.0043 1.5E-07 60.8 5.9 93 90-211 4-105 (318)
108 3btv_A Galactose/lactose metab 96.1 0.0027 9.3E-08 64.9 3.7 99 89-212 20-128 (438)
109 3abi_A Putative uncharacterize 95.8 0.0069 2.4E-07 60.3 4.7 93 89-209 16-108 (365)
110 3ius_A Uncharacterized conserv 95.6 0.091 3.1E-06 49.0 11.5 34 87-121 3-36 (286)
111 3a06_A 1-deoxy-D-xylulose 5-ph 95.4 0.05 1.7E-06 55.1 9.4 109 90-210 4-116 (376)
112 2dt5_A AT-rich DNA-binding pro 95.4 0.013 4.3E-07 54.8 4.7 93 90-212 81-174 (211)
113 3oqb_A Oxidoreductase; structu 95.3 0.013 4.5E-07 58.2 4.7 95 89-211 6-115 (383)
114 2vt3_A REX, redox-sensing tran 95.2 0.033 1.1E-06 52.1 7.0 93 90-212 86-179 (215)
115 3ggo_A Prephenate dehydrogenas 95.0 0.13 4.5E-06 50.2 10.7 42 87-132 31-74 (314)
116 3qvo_A NMRA family protein; st 94.8 0.022 7.6E-07 52.3 4.5 36 86-121 20-56 (236)
117 4gmf_A Yersiniabactin biosynth 94.7 0.092 3.1E-06 52.8 9.1 91 89-211 7-102 (372)
118 3dhn_A NAD-dependent epimerase 94.7 0.062 2.1E-06 48.4 7.2 31 90-121 5-36 (227)
119 3keo_A Redox-sensing transcrip 94.6 0.02 7E-07 53.6 3.5 95 90-212 85-182 (212)
120 1ebf_A Homoserine dehydrogenas 94.5 0.029 9.9E-07 56.3 4.6 34 89-122 4-40 (358)
121 3dqp_A Oxidoreductase YLBE; al 94.2 0.17 5.8E-06 45.4 8.9 30 91-121 2-32 (219)
122 2r6j_A Eugenol synthase 1; phe 94.1 0.048 1.6E-06 52.0 5.2 99 88-209 10-114 (318)
123 3i6i_A Putative leucoanthocyan 94.0 0.055 1.9E-06 52.4 5.4 101 89-209 10-118 (346)
124 3m2p_A UDP-N-acetylglucosamine 94.0 0.1 3.4E-06 49.6 7.2 33 88-121 1-34 (311)
125 4ina_A Saccharopine dehydrogen 93.9 0.1 3.6E-06 52.7 7.4 154 90-262 2-167 (405)
126 3e48_A Putative nucleoside-dip 93.7 0.032 1.1E-06 52.4 3.0 95 90-209 1-104 (289)
127 2g1u_A Hypothetical protein TM 93.7 0.17 5.9E-06 43.5 7.5 32 89-121 19-50 (155)
128 1y81_A Conserved hypothetical 93.7 0.39 1.3E-05 41.4 9.7 84 89-210 14-101 (138)
129 2bma_A Glutamate dehydrogenase 93.6 0.22 7.5E-06 51.9 9.2 103 89-206 252-364 (470)
130 1vm6_A DHPR, dihydrodipicolina 93.4 1.8 6E-05 40.9 14.4 154 90-328 13-175 (228)
131 2yfq_A Padgh, NAD-GDH, NAD-spe 93.2 0.14 4.9E-06 52.5 7.1 34 89-123 212-245 (421)
132 3b1f_A Putative prephenate deh 93.2 0.41 1.4E-05 45.3 9.9 32 89-120 6-38 (290)
133 1qyd_A Pinoresinol-lariciresin 93.1 0.17 5.9E-06 47.7 7.1 100 90-209 5-115 (313)
134 3d1l_A Putative NADP oxidoredu 93.0 0.29 9.9E-06 45.7 8.4 37 90-129 11-47 (266)
135 3c1o_A Eugenol synthase; pheny 93.0 0.37 1.3E-05 45.7 9.2 100 90-209 5-112 (321)
136 1hdo_A Biliverdin IX beta redu 92.8 0.18 6E-06 44.2 6.3 31 90-121 4-35 (206)
137 3ew7_A LMO0794 protein; Q8Y8U8 92.8 0.42 1.4E-05 42.3 8.9 31 90-121 1-32 (221)
138 3gpi_A NAD-dependent epimerase 92.7 0.14 4.9E-06 47.8 5.9 31 90-121 4-34 (286)
139 3fwz_A Inner membrane protein 92.3 0.25 8.6E-06 41.9 6.4 41 87-131 5-45 (140)
140 3e8x_A Putative NAD-dependent 92.2 0.97 3.3E-05 40.9 10.7 32 89-121 21-53 (236)
141 2tmg_A Protein (glutamate dehy 91.9 0.36 1.2E-05 49.5 8.0 92 89-205 209-310 (415)
142 3r3j_A Glutamate dehydrogenase 91.8 0.48 1.7E-05 49.1 8.9 103 89-206 239-351 (456)
143 2nu8_A Succinyl-COA ligase [AD 91.7 0.27 9.2E-06 47.6 6.6 86 90-208 8-94 (288)
144 3c7a_A Octopine dehydrogenase; 91.6 0.51 1.7E-05 47.1 8.7 33 88-120 1-33 (404)
145 1qyc_A Phenylcoumaran benzylic 91.5 0.29 1E-05 46.0 6.5 100 90-209 5-112 (308)
146 2duw_A Putative COA-binding pr 91.5 0.4 1.4E-05 41.6 6.8 84 90-209 14-101 (145)
147 4huj_A Uncharacterized protein 90.8 0.19 6.6E-06 46.1 4.3 33 89-122 23-55 (220)
148 2d59_A Hypothetical protein PH 90.6 0.96 3.3E-05 39.0 8.4 82 90-209 23-108 (144)
149 1zej_A HBD-9, 3-hydroxyacyl-CO 90.5 1 3.4E-05 43.9 9.3 40 90-134 13-52 (293)
150 1bgv_A Glutamate dehydrogenase 90.3 0.35 1.2E-05 50.0 6.2 101 90-206 231-342 (449)
151 3ego_A Probable 2-dehydropanto 90.2 1.7 6E-05 41.8 10.8 32 88-121 1-32 (307)
152 3ruf_A WBGU; rossmann fold, UD 90.1 0.45 1.5E-05 45.6 6.5 32 89-121 25-57 (351)
153 2gas_A Isoflavone reductase; N 90.1 0.19 6.6E-06 47.2 3.8 31 90-121 3-34 (307)
154 2hjr_A Malate dehydrogenase; m 89.6 0.87 3E-05 44.7 8.2 35 87-122 12-46 (328)
155 3llv_A Exopolyphosphatase-rela 89.0 0.36 1.2E-05 40.5 4.3 36 90-129 7-42 (141)
156 3c24_A Putative oxidoreductase 88.8 0.39 1.3E-05 45.5 4.9 32 88-120 10-42 (286)
157 3ff4_A Uncharacterized protein 88.8 1.3 4.5E-05 37.5 7.7 80 91-209 6-89 (122)
158 1vpd_A Tartronate semialdehyde 88.8 0.31 1.1E-05 46.2 4.1 31 88-119 4-34 (299)
159 3aoe_E Glutamate dehydrogenase 88.2 1.5 5.2E-05 44.9 9.0 86 90-204 219-313 (419)
160 1lss_A TRK system potassium up 88.2 0.52 1.8E-05 38.7 4.6 31 90-121 5-35 (140)
161 1id1_A Putative potassium chan 88.1 0.48 1.6E-05 40.5 4.5 31 90-121 4-34 (153)
162 3slg_A PBGP3 protein; structur 88.1 0.35 1.2E-05 46.9 4.1 36 86-121 21-57 (372)
163 4fcc_A Glutamate dehydrogenase 88.0 1.1 3.9E-05 46.3 8.0 102 89-206 235-346 (450)
164 2ew2_A 2-dehydropantoate 2-red 87.9 0.43 1.5E-05 45.0 4.5 41 88-132 2-42 (316)
165 1evy_A Glycerol-3-phosphate de 87.8 0.45 1.5E-05 46.7 4.7 37 84-121 9-46 (366)
166 3gt0_A Pyrroline-5-carboxylate 87.8 0.41 1.4E-05 44.4 4.2 42 88-132 1-45 (247)
167 3pp8_A Glyoxylate/hydroxypyruv 87.7 0.42 1.4E-05 47.0 4.4 31 90-121 140-170 (315)
168 4g2n_A D-isomer specific 2-hyd 87.6 0.47 1.6E-05 47.3 4.7 31 90-121 174-204 (345)
169 2x0j_A Malate dehydrogenase; o 87.6 1 3.5E-05 43.9 7.0 31 90-121 1-32 (294)
170 1iuk_A Hypothetical protein TT 87.4 1.1 3.8E-05 38.6 6.4 86 90-211 14-103 (140)
171 2i76_A Hypothetical protein; N 87.4 0.19 6.4E-06 47.7 1.6 38 88-129 1-38 (276)
172 2pi1_A D-lactate dehydrogenase 87.3 0.47 1.6E-05 47.0 4.5 31 90-121 142-172 (334)
173 1y1p_A ARII, aldehyde reductas 87.0 3.9 0.00013 38.5 10.7 31 90-121 12-43 (342)
174 3mog_A Probable 3-hydroxybutyr 87.0 1.9 6.4E-05 44.8 9.0 40 90-133 6-45 (483)
175 3hg7_A D-isomer specific 2-hyd 86.8 0.52 1.8E-05 46.6 4.5 31 90-121 141-171 (324)
176 3evt_A Phosphoglycerate dehydr 86.8 0.53 1.8E-05 46.5 4.5 31 90-121 138-168 (324)
177 3kb6_A D-lactate dehydrogenase 86.7 0.53 1.8E-05 46.6 4.5 30 90-120 142-171 (334)
178 2gn4_A FLAA1 protein, UDP-GLCN 86.7 1.3 4.3E-05 43.1 7.2 33 89-121 21-55 (344)
179 3nep_X Malate dehydrogenase; h 86.6 2.4 8.1E-05 41.6 9.1 30 90-119 1-31 (314)
180 2v6b_A L-LDH, L-lactate dehydr 86.5 2.4 8.3E-05 40.9 9.0 30 90-119 1-31 (304)
181 4ezb_A Uncharacterized conserv 86.5 0.65 2.2E-05 45.2 4.9 33 88-120 23-55 (317)
182 4h7p_A Malate dehydrogenase; s 86.5 2.5 8.5E-05 42.1 9.3 24 89-112 24-48 (345)
183 2vns_A Metalloreductase steap3 86.5 0.54 1.8E-05 42.9 4.1 32 89-121 28-59 (215)
184 1xdw_A NAD+-dependent (R)-2-hy 86.5 0.55 1.9E-05 46.2 4.5 31 90-121 147-177 (331)
185 1qp8_A Formate dehydrogenase; 86.4 0.55 1.9E-05 45.8 4.4 30 90-120 125-154 (303)
186 1oi7_A Succinyl-COA synthetase 86.4 0.89 3E-05 44.0 5.8 86 90-208 8-94 (288)
187 2yq5_A D-isomer specific 2-hyd 86.2 0.57 2E-05 46.7 4.5 31 90-121 149-179 (343)
188 2g76_A 3-PGDH, D-3-phosphoglyc 86.2 0.63 2.1E-05 46.1 4.7 31 90-121 166-196 (335)
189 3gg9_A D-3-phosphoglycerate de 86.2 0.58 2E-05 46.7 4.5 31 90-121 161-191 (352)
190 1dxy_A D-2-hydroxyisocaproate 86.2 0.58 2E-05 46.2 4.5 31 90-121 146-176 (333)
191 2axq_A Saccharopine dehydrogen 85.9 0.68 2.3E-05 47.9 5.0 91 89-203 23-113 (467)
192 3jtm_A Formate dehydrogenase, 85.8 0.6 2.1E-05 46.6 4.4 31 90-121 165-195 (351)
193 4e5n_A Thermostable phosphite 85.7 0.54 1.9E-05 46.4 4.0 31 90-121 146-176 (330)
194 1gdh_A D-glycerate dehydrogena 85.7 0.7 2.4E-05 45.3 4.7 31 90-121 147-177 (320)
195 4dgs_A Dehydrogenase; structur 85.6 0.7 2.4E-05 46.0 4.7 30 90-120 172-201 (340)
196 1mx3_A CTBP1, C-terminal bindi 85.6 0.7 2.4E-05 46.0 4.7 30 90-120 169-198 (347)
197 1gtm_A Glutamate dehydrogenase 85.4 0.7 2.4E-05 47.3 4.7 32 90-122 213-245 (419)
198 3gvx_A Glycerate dehydrogenase 85.3 0.56 1.9E-05 45.6 3.8 31 90-121 123-153 (290)
199 4hy3_A Phosphoglycerate oxidor 85.3 0.68 2.3E-05 46.6 4.5 31 90-121 177-207 (365)
200 3qha_A Putative oxidoreductase 85.0 0.6 2E-05 44.7 3.8 31 89-120 15-45 (296)
201 3g0o_A 3-hydroxyisobutyrate de 85.0 0.76 2.6E-05 44.0 4.6 41 88-132 6-46 (303)
202 3l4b_C TRKA K+ channel protien 85.0 0.59 2E-05 42.4 3.6 36 90-129 1-36 (218)
203 1q0q_A 1-deoxy-D-xylulose 5-ph 84.9 1.1 3.9E-05 45.5 5.9 46 86-133 7-54 (406)
204 2cuk_A Glycerate dehydrogenase 84.9 0.75 2.6E-05 44.9 4.5 30 90-120 145-174 (311)
205 2y1e_A 1-deoxy-D-xylulose 5-ph 84.8 0.81 2.8E-05 46.5 4.7 44 90-133 22-67 (398)
206 2ahr_A Putative pyrroline carb 84.7 0.83 2.8E-05 42.3 4.5 38 90-131 4-41 (259)
207 3doj_A AT3G25530, dehydrogenas 84.6 0.96 3.3E-05 43.6 5.1 30 90-120 22-51 (310)
208 3sc6_A DTDP-4-dehydrorhamnose 84.6 0.63 2.2E-05 43.2 3.7 34 87-121 3-37 (287)
209 1wwk_A Phosphoglycerate dehydr 84.5 0.8 2.7E-05 44.6 4.5 31 90-121 143-173 (307)
210 1yb4_A Tartronic semialdehyde 84.5 0.55 1.9E-05 44.2 3.3 30 90-120 4-33 (295)
211 3two_A Mannitol dehydrogenase; 84.5 1.9 6.5E-05 41.9 7.2 81 91-203 179-259 (348)
212 1ldn_A L-lactate dehydrogenase 84.4 1.4 4.8E-05 42.9 6.3 31 89-119 6-37 (316)
213 3jv7_A ADH-A; dehydrogenase, n 84.4 2.6 9E-05 40.7 8.2 90 91-210 174-271 (345)
214 1j4a_A D-LDH, D-lactate dehydr 84.3 0.8 2.7E-05 45.1 4.5 31 90-121 147-177 (333)
215 2w2k_A D-mandelate dehydrogena 84.3 0.88 3E-05 45.1 4.8 31 90-121 164-195 (348)
216 2ekl_A D-3-phosphoglycerate de 84.2 0.84 2.9E-05 44.6 4.5 31 90-121 143-173 (313)
217 3hwr_A 2-dehydropantoate 2-red 84.2 6.1 0.00021 38.0 10.7 30 89-119 19-48 (318)
218 3oet_A Erythronate-4-phosphate 84.1 0.83 2.8E-05 46.3 4.5 30 90-120 120-149 (381)
219 3fpc_A NADP-dependent alcohol 84.0 3.7 0.00013 39.9 9.1 99 91-211 169-268 (352)
220 1sc6_A PGDH, D-3-phosphoglycer 84.0 0.83 2.8E-05 46.4 4.5 30 90-120 146-175 (404)
221 3gg2_A Sugar dehydrogenase, UD 84.0 0.84 2.9E-05 46.9 4.6 42 88-133 1-42 (450)
222 2yjz_A Metalloreductase steap4 84.3 0.21 7.2E-06 45.6 0.0 43 74-119 6-48 (201)
223 1t2d_A LDH-P, L-lactate dehydr 83.8 2.7 9.1E-05 41.1 8.0 32 90-122 5-36 (322)
224 2o4c_A Erythronate-4-phosphate 83.8 0.86 3E-05 46.1 4.5 30 90-120 117-146 (380)
225 3ba1_A HPPR, hydroxyphenylpyru 83.7 0.86 2.9E-05 45.1 4.4 30 90-120 165-194 (333)
226 2gcg_A Glyoxylate reductase/hy 83.7 0.82 2.8E-05 44.9 4.2 31 90-121 156-186 (330)
227 1ez4_A Lactate dehydrogenase; 83.6 2.6 8.9E-05 41.2 7.8 32 89-121 5-37 (318)
228 2zcu_A Uncharacterized oxidore 83.3 1.3 4.4E-05 40.9 5.2 31 91-121 1-33 (286)
229 2dbq_A Glyoxylate reductase; D 83.3 0.95 3.3E-05 44.5 4.5 31 90-121 151-181 (334)
230 3aog_A Glutamate dehydrogenase 83.3 2.9 0.0001 43.1 8.3 33 89-122 235-267 (440)
231 3c85_A Putative glutathione-re 83.3 1 3.5E-05 39.4 4.3 36 90-129 40-76 (183)
232 2z2v_A Hypothetical protein PH 83.2 1.2 4.1E-05 44.4 5.3 92 90-209 17-108 (365)
233 3l6d_A Putative oxidoreductase 83.2 1.1 3.6E-05 43.2 4.8 40 89-132 9-48 (306)
234 2d0i_A Dehydrogenase; structur 83.2 0.93 3.2E-05 44.6 4.4 31 90-121 147-177 (333)
235 1bg6_A N-(1-D-carboxylethyl)-L 83.0 1 3.6E-05 43.4 4.6 31 89-120 4-34 (359)
236 2a35_A Hypothetical protein PA 82.9 0.93 3.2E-05 39.9 3.9 34 88-121 4-39 (215)
237 4dll_A 2-hydroxy-3-oxopropiona 82.9 1 3.4E-05 43.7 4.4 38 90-131 32-69 (320)
238 2nac_A NAD-dependent formate d 82.8 0.96 3.3E-05 45.9 4.4 31 90-121 192-222 (393)
239 2zqz_A L-LDH, L-lactate dehydr 82.7 3.5 0.00012 40.4 8.3 31 90-121 10-41 (326)
240 2yv1_A Succinyl-COA ligase [AD 82.7 1.9 6.5E-05 41.8 6.3 85 90-208 14-100 (294)
241 2hmt_A YUAA protein; RCK, KTN, 82.6 0.98 3.4E-05 37.1 3.7 31 90-121 7-37 (144)
242 3h2s_A Putative NADH-flavin re 82.4 1.2 4.1E-05 39.6 4.5 31 90-121 1-32 (224)
243 4b4o_A Epimerase family protei 82.4 1.1 3.9E-05 42.0 4.5 31 90-121 1-32 (298)
244 3r6d_A NAD-dependent epimerase 82.2 1.2 4.3E-05 39.7 4.5 33 88-121 4-38 (221)
245 4e21_A 6-phosphogluconate dehy 82.1 1.1 3.9E-05 44.5 4.6 40 89-132 22-61 (358)
246 2uyy_A N-PAC protein; long-cha 81.9 1.2 4.1E-05 42.6 4.5 30 90-120 31-60 (316)
247 2wtb_A MFP2, fatty acid multif 81.7 4.5 0.00015 44.1 9.4 37 90-130 313-349 (725)
248 2h78_A Hibadh, 3-hydroxyisobut 81.6 1.1 3.9E-05 42.5 4.2 39 90-132 4-42 (302)
249 3dtt_A NADP oxidoreductase; st 81.6 1.3 4.5E-05 41.1 4.6 33 87-120 17-49 (245)
250 4egb_A DTDP-glucose 4,6-dehydr 81.5 1.1 3.6E-05 42.9 4.0 33 89-121 24-58 (346)
251 2rcy_A Pyrroline carboxylate r 81.5 1 3.5E-05 41.7 3.7 24 89-112 4-27 (262)
252 4gbj_A 6-phosphogluconate dehy 81.3 1 3.6E-05 43.4 3.9 33 87-120 3-35 (297)
253 3vps_A TUNA, NAD-dependent epi 81.2 1.3 4.4E-05 41.5 4.4 33 88-121 6-39 (321)
254 3l9w_A Glutathione-regulated p 81.1 1.7 5.9E-05 44.1 5.6 38 91-132 6-43 (413)
255 2pv7_A T-protein [includes: ch 81.1 1.6 5.5E-05 41.8 5.1 32 88-120 20-52 (298)
256 2j6i_A Formate dehydrogenase; 81.1 1.1 3.9E-05 44.7 4.1 30 90-120 165-195 (364)
257 3cky_A 2-hydroxymethyl glutara 81.0 1.2 4.3E-05 42.0 4.3 31 89-120 4-34 (301)
258 3k5p_A D-3-phosphoglycerate de 80.8 1.3 4.4E-05 45.4 4.5 30 90-120 157-186 (416)
259 3ip1_A Alcohol dehydrogenase, 80.8 5.4 0.00018 39.6 9.0 38 91-132 216-254 (404)
260 2g5c_A Prephenate dehydrogenas 80.7 1.5 5E-05 41.2 4.6 31 90-120 2-33 (281)
261 3dfu_A Uncharacterized protein 80.6 0.61 2.1E-05 44.0 1.9 31 90-121 7-37 (232)
262 1f0y_A HCDH, L-3-hydroxyacyl-C 80.5 1.5 5E-05 41.9 4.6 30 90-120 16-45 (302)
263 3dfz_A SIRC, precorrin-2 dehyd 80.4 5.2 0.00018 37.4 8.2 93 90-211 32-124 (223)
264 2cvz_A Dehydrogenase, 3-hydrox 80.2 1.2 4.2E-05 41.6 3.9 29 90-120 2-30 (289)
265 1ur5_A Malate dehydrogenase; o 80.1 1.5 5.2E-05 42.5 4.6 34 88-122 1-34 (309)
266 3pef_A 6-phosphogluconate dehy 80.1 1.6 5.3E-05 41.3 4.6 30 90-120 2-31 (287)
267 3d4o_A Dipicolinate synthase s 80.0 1.5 5.1E-05 41.9 4.5 31 90-121 156-186 (293)
268 2x4g_A Nucleoside-diphosphate- 80.0 1.6 5.5E-05 41.3 4.7 31 90-121 14-45 (342)
269 1yqd_A Sinapyl alcohol dehydro 79.9 1.3 4.6E-05 43.5 4.2 30 91-121 190-219 (366)
270 3nkl_A UDP-D-quinovosamine 4-d 79.9 2 6.8E-05 35.8 4.7 33 90-122 5-37 (141)
271 1xq6_A Unknown protein; struct 79.6 2.1 7.1E-05 38.4 5.1 33 89-121 4-38 (253)
272 2f1k_A Prephenate dehydrogenas 79.5 1.7 5.7E-05 40.7 4.5 38 90-131 1-38 (279)
273 4dvj_A Putative zinc-dependent 79.3 3 0.0001 40.9 6.6 96 90-208 173-269 (363)
274 1jay_A Coenzyme F420H2:NADP+ o 79.3 1.9 6.6E-05 38.4 4.7 31 90-121 1-32 (212)
275 2o3j_A UDP-glucose 6-dehydroge 79.2 1.5 5E-05 45.4 4.4 42 88-132 8-50 (481)
276 3i83_A 2-dehydropantoate 2-red 79.2 1.8 6E-05 41.8 4.7 33 88-121 1-33 (320)
277 2rir_A Dipicolinate synthase, 79.1 1.7 5.7E-05 41.7 4.5 31 90-121 158-188 (300)
278 2yv2_A Succinyl-COA synthetase 79.1 2.8 9.7E-05 40.6 6.1 86 89-208 13-101 (297)
279 3uog_A Alcohol dehydrogenase; 78.9 3.4 0.00012 40.4 6.7 91 90-209 191-287 (363)
280 4ej6_A Putative zinc-binding d 78.9 6.1 0.00021 38.8 8.6 89 91-204 185-279 (370)
281 3au8_A 1-deoxy-D-xylulose 5-ph 78.9 2 6.9E-05 44.5 5.1 44 89-133 77-125 (488)
282 1n7h_A GDP-D-mannose-4,6-dehyd 78.9 1.7 5.9E-05 42.2 4.5 34 87-121 26-60 (381)
283 2d8a_A PH0655, probable L-thre 78.8 2.8 9.6E-05 40.6 6.1 30 91-121 170-200 (348)
284 3ktd_A Prephenate dehydrogenas 78.7 2.6 8.8E-05 41.8 5.8 40 89-132 8-47 (341)
285 2ydy_A Methionine adenosyltran 78.5 2 6.9E-05 40.3 4.8 32 88-120 1-33 (315)
286 2dq4_A L-threonine 3-dehydroge 78.3 2.4 8.4E-05 41.0 5.4 30 91-121 167-197 (343)
287 3ldh_A Lactate dehydrogenase; 78.2 5.1 0.00018 39.6 7.8 140 90-258 22-182 (330)
288 4e12_A Diketoreductase; oxidor 78.1 2.1 7.2E-05 40.6 4.8 39 90-132 5-43 (283)
289 2raf_A Putative dinucleotide-b 78.0 2 7E-05 38.9 4.5 30 89-119 19-48 (209)
290 3tri_A Pyrroline-5-carboxylate 78.0 1.7 5.9E-05 41.3 4.2 40 89-132 3-45 (280)
291 3pdu_A 3-hydroxyisobutyrate de 77.3 1.3 4.5E-05 41.8 3.1 30 90-120 2-31 (287)
292 1ff9_A Saccharopine reductase; 77.2 3.4 0.00012 42.3 6.4 90 90-203 4-93 (450)
293 4g65_A TRK system potassium up 77.2 2.3 7.9E-05 43.7 5.2 39 90-132 4-42 (461)
294 3gvi_A Malate dehydrogenase; N 77.2 4.2 0.00014 39.9 6.8 30 89-119 7-37 (324)
295 3st7_A Capsular polysaccharide 77.0 2.4 8.3E-05 41.0 5.0 44 90-134 1-45 (369)
296 2qyt_A 2-dehydropantoate 2-red 76.8 2 6.7E-05 40.7 4.2 32 89-120 8-44 (317)
297 1ygy_A PGDH, D-3-phosphoglycer 76.7 2.1 7.2E-05 44.8 4.7 30 90-120 143-172 (529)
298 1e6u_A GDP-fucose synthetase; 76.7 2.1 7.2E-05 40.2 4.4 31 89-120 3-34 (321)
299 2yy7_A L-threonine dehydrogena 76.4 1.6 5.4E-05 40.8 3.3 34 88-121 1-36 (312)
300 1i36_A Conserved hypothetical 76.2 2.1 7.1E-05 39.7 4.1 29 91-121 2-30 (264)
301 2gf2_A Hibadh, 3-hydroxyisobut 76.1 1.8 6.3E-05 40.7 3.8 29 91-120 2-30 (296)
302 3qsg_A NAD-binding phosphogluc 76.1 1.8 6.2E-05 41.7 3.8 30 90-120 25-55 (312)
303 3hn2_A 2-dehydropantoate 2-red 76.1 1.9 6.4E-05 41.5 3.9 33 88-121 1-33 (312)
304 1z82_A Glycerol-3-phosphate de 75.7 2.4 8.3E-05 41.0 4.6 34 87-121 12-45 (335)
305 1uuf_A YAHK, zinc-type alcohol 75.4 2.1 7.3E-05 42.1 4.2 30 91-121 197-226 (369)
306 2rh8_A Anthocyanidin reductase 75.2 2.6 8.8E-05 40.0 4.6 32 88-120 8-40 (338)
307 4b8w_A GDP-L-fucose synthase; 75.2 2.3 7.8E-05 39.3 4.1 26 87-112 4-30 (319)
308 3g17_A Similar to 2-dehydropan 75.1 1.4 4.8E-05 42.0 2.7 33 88-121 1-33 (294)
309 4id9_A Short-chain dehydrogena 75.1 2.2 7.6E-05 40.6 4.1 31 90-121 20-51 (347)
310 2q3e_A UDP-glucose 6-dehydroge 74.7 2 6.9E-05 44.0 3.9 39 90-131 6-45 (467)
311 2wm3_A NMRA-like family domain 74.7 2.2 7.6E-05 39.8 3.9 32 90-121 6-38 (299)
312 1ek6_A UDP-galactose 4-epimera 74.4 2.7 9.1E-05 40.0 4.4 33 88-121 1-34 (348)
313 1e3j_A NADP(H)-dependent ketos 74.3 13 0.00045 35.8 9.5 29 91-120 171-199 (352)
314 1ks9_A KPA reductase;, 2-dehyd 74.1 2.9 9.8E-05 38.8 4.5 30 91-121 2-31 (291)
315 3eag_A UDP-N-acetylmuramate:L- 74.0 11 0.00039 36.3 9.0 86 90-203 5-91 (326)
316 3k92_A NAD-GDH, NAD-specific g 74.0 5.2 0.00018 41.0 6.7 33 89-122 221-253 (424)
317 3ghy_A Ketopantoate reductase 74.0 2.7 9.2E-05 40.8 4.4 30 90-120 4-33 (335)
318 3p7m_A Malate dehydrogenase; p 73.6 7.3 0.00025 38.1 7.5 30 89-119 5-35 (321)
319 2izz_A Pyrroline-5-carboxylate 73.5 2.7 9.1E-05 40.7 4.2 33 89-121 22-57 (322)
320 3qwb_A Probable quinone oxidor 73.4 5 0.00017 38.5 6.2 90 91-208 151-246 (334)
321 4aj2_A L-lactate dehydrogenase 73.3 5.5 0.00019 39.3 6.5 31 90-121 20-51 (331)
322 1rpn_A GDP-mannose 4,6-dehydra 73.1 3 0.0001 39.3 4.5 32 89-121 14-46 (335)
323 3mw9_A GDH 1, glutamate dehydr 73.0 21 0.0007 37.4 10.9 32 89-121 244-275 (501)
324 1xa0_A Putative NADPH dependen 73.0 5.9 0.0002 37.8 6.5 30 91-121 152-182 (328)
325 3d64_A Adenosylhomocysteinase; 72.9 3 0.0001 43.6 4.7 30 90-120 278-307 (494)
326 3phh_A Shikimate dehydrogenase 72.4 30 0.001 33.0 11.3 32 90-122 119-150 (269)
327 2b69_A UDP-glucuronate decarbo 72.2 3.3 0.00011 39.4 4.5 32 89-121 27-59 (343)
328 1y7t_A Malate dehydrogenase; N 72.1 3.6 0.00012 39.8 4.8 32 89-120 4-42 (327)
329 3ay3_A NAD-dependent epimerase 72.0 1.6 5.5E-05 40.2 2.2 33 88-121 1-34 (267)
330 3krt_A Crotonyl COA reductase; 71.9 5.6 0.00019 40.2 6.4 39 91-133 231-270 (456)
331 1yqg_A Pyrroline-5-carboxylate 71.9 2.8 9.6E-05 38.6 3.8 39 90-131 1-39 (263)
332 3s2e_A Zinc-containing alcohol 71.8 4.1 0.00014 39.3 5.1 83 91-203 169-257 (340)
333 3oj0_A Glutr, glutamyl-tRNA re 71.8 1.5 5.2E-05 36.9 1.8 36 90-129 22-57 (144)
334 1np3_A Ketol-acid reductoisome 71.5 3.2 0.00011 40.6 4.3 31 90-121 17-47 (338)
335 3jyn_A Quinone oxidoreductase; 71.4 3.7 0.00013 39.3 4.7 40 90-133 142-182 (325)
336 1piw_A Hypothetical zinc-type 71.3 7.4 0.00025 37.8 6.9 30 91-121 182-211 (360)
337 3fbg_A Putative arginate lyase 70.7 5.1 0.00018 38.8 5.6 89 91-203 153-242 (346)
338 3goh_A Alcohol dehydrogenase, 70.7 3.6 0.00012 39.2 4.4 29 91-120 145-173 (315)
339 2hun_A 336AA long hypothetical 70.7 3.2 0.00011 39.2 4.0 32 90-121 4-37 (336)
340 1t2a_A GDP-mannose 4,6 dehydra 70.6 3.7 0.00013 39.6 4.6 33 88-121 23-56 (375)
341 4gwg_A 6-phosphogluconate dehy 70.5 3.3 0.00011 43.1 4.3 40 90-133 5-44 (484)
342 2cf5_A Atccad5, CAD, cinnamyl 70.4 1.9 6.5E-05 42.1 2.4 30 91-121 183-212 (357)
343 3g79_A NDP-N-acetyl-D-galactos 70.1 1.7 5.8E-05 45.2 2.1 32 90-121 19-51 (478)
344 1pl8_A Human sorbitol dehydrog 70.0 7.4 0.00025 37.8 6.6 30 91-121 174-204 (356)
345 3kkj_A Amine oxidase, flavin-c 69.9 4.1 0.00014 34.9 4.2 32 88-120 1-32 (336)
346 2b5w_A Glucose dehydrogenase; 69.7 5.6 0.00019 38.7 5.6 31 90-121 174-207 (357)
347 1vj0_A Alcohol dehydrogenase, 69.7 3.3 0.00011 40.8 4.0 39 91-132 198-236 (380)
348 3uko_A Alcohol dehydrogenase c 69.6 6.5 0.00022 38.5 6.1 30 90-120 195-225 (378)
349 4a2c_A Galactitol-1-phosphate 69.5 16 0.00054 34.9 8.8 89 91-204 163-255 (346)
350 2bll_A Protein YFBG; decarboxy 69.3 4.3 0.00015 38.3 4.6 31 91-121 2-33 (345)
351 2iz1_A 6-phosphogluconate dehy 69.2 3.8 0.00013 42.1 4.4 40 89-132 5-44 (474)
352 1f8f_A Benzyl alcohol dehydrog 69.2 3.9 0.00013 40.0 4.4 29 91-120 193-222 (371)
353 3h9u_A Adenosylhomocysteinase; 69.1 4 0.00014 42.1 4.5 31 90-122 212-242 (436)
354 3n58_A Adenosylhomocysteinase; 69.1 4 0.00014 42.4 4.5 29 90-119 248-276 (464)
355 1v8b_A Adenosylhomocysteinase; 69.0 3.1 0.00011 43.3 3.8 30 90-120 258-287 (479)
356 5mdh_A Malate dehydrogenase; o 68.7 5.2 0.00018 39.4 5.1 23 90-112 4-27 (333)
357 1rjw_A ADH-HT, alcohol dehydro 68.7 7.3 0.00025 37.5 6.2 30 91-121 167-196 (339)
358 1mv8_A GMD, GDP-mannose 6-dehy 68.5 3.7 0.00013 41.5 4.1 39 90-132 1-39 (436)
359 1p0f_A NADP-dependent alcohol 68.4 6.6 0.00023 38.3 5.8 29 91-120 194-223 (373)
360 2c20_A UDP-glucose 4-epimerase 68.3 4.5 0.00015 38.1 4.5 31 90-121 2-33 (330)
361 1yj8_A Glycerol-3-phosphate de 68.3 2.7 9.3E-05 41.4 3.0 24 88-111 20-43 (375)
362 2c5a_A GDP-mannose-3', 5'-epim 68.1 5.9 0.0002 38.5 5.4 31 90-121 30-61 (379)
363 2ph5_A Homospermidine synthase 68.1 3.7 0.00012 42.8 4.0 94 89-208 13-113 (480)
364 1lld_A L-lactate dehydrogenase 68.0 5 0.00017 38.3 4.7 31 90-120 8-39 (319)
365 1c1d_A L-phenylalanine dehydro 67.7 4.4 0.00015 40.5 4.4 31 90-122 176-206 (355)
366 3m6i_A L-arabinitol 4-dehydrog 67.7 11 0.00036 36.6 7.2 94 91-204 182-278 (363)
367 2x6t_A ADP-L-glycero-D-manno-h 67.4 4.5 0.00016 38.7 4.3 32 90-121 47-79 (357)
368 1txg_A Glycerol-3-phosphate de 67.4 3.9 0.00013 38.9 3.9 29 91-120 2-30 (335)
369 2d4a_B Malate dehydrogenase; a 67.1 4.1 0.00014 39.5 4.0 29 91-121 1-30 (308)
370 1e3i_A Alcohol dehydrogenase, 67.1 7.9 0.00027 37.8 6.1 29 91-120 198-227 (376)
371 2jhf_A Alcohol dehydrogenase E 67.0 11 0.00036 36.9 7.0 29 91-120 194-223 (374)
372 3d0o_A L-LDH 1, L-lactate dehy 67.0 4.3 0.00015 39.5 4.1 33 88-121 5-38 (317)
373 3gqv_A Enoyl reductase; medium 66.9 11 0.00037 36.9 7.1 29 91-120 167-196 (371)
374 2p4q_A 6-phosphogluconate dehy 66.8 4.2 0.00015 42.2 4.3 42 87-132 8-49 (497)
375 3pid_A UDP-glucose 6-dehydroge 66.6 5.2 0.00018 41.0 4.8 40 89-133 36-75 (432)
376 7mdh_A Protein (malate dehydro 66.5 10 0.00034 38.2 6.8 24 89-112 32-56 (375)
377 1orr_A CDP-tyvelose-2-epimeras 66.4 5.1 0.00018 37.8 4.5 31 90-121 2-33 (347)
378 2zyd_A 6-phosphogluconate dehy 66.4 4.6 0.00016 41.7 4.4 41 89-133 15-55 (480)
379 3ouz_A Biotin carboxylase; str 66.4 4.1 0.00014 40.9 4.0 36 84-120 1-36 (446)
380 3vku_A L-LDH, L-lactate dehydr 66.3 7.9 0.00027 38.1 5.9 31 90-121 10-41 (326)
381 1x0v_A GPD-C, GPDH-C, glycerol 65.9 3.6 0.00012 39.8 3.3 23 89-111 8-30 (354)
382 2aef_A Calcium-gated potassium 65.8 3.3 0.00011 37.6 2.9 30 89-120 9-38 (234)
383 2q1w_A Putative nucleotide sug 65.7 5.7 0.0002 37.7 4.7 31 90-121 22-53 (333)
384 4g65_A TRK system potassium up 65.7 3.5 0.00012 42.4 3.3 93 90-208 236-331 (461)
385 1pgj_A 6PGDH, 6-PGDH, 6-phosph 65.3 4.6 0.00016 41.6 4.1 39 90-132 2-40 (478)
386 2pgd_A 6-phosphogluconate dehy 65.1 4.8 0.00016 41.5 4.2 31 90-121 3-33 (482)
387 3ko8_A NAD-dependent epimerase 64.9 5.8 0.0002 36.9 4.5 31 90-121 1-32 (312)
388 1pjq_A CYSG, siroheme synthase 64.8 21 0.0007 36.5 8.9 94 90-212 13-107 (457)
389 2eih_A Alcohol dehydrogenase; 64.5 10 0.00035 36.5 6.3 31 90-121 168-199 (343)
390 3nx4_A Putative oxidoreductase 64.3 7.5 0.00026 36.9 5.2 30 91-121 149-179 (324)
391 3mwd_B ATP-citrate synthase; A 64.3 12 0.00041 37.1 6.7 95 90-210 11-113 (334)
392 2pzm_A Putative nucleotide sug 63.9 7.5 0.00026 36.9 5.1 32 89-121 20-52 (330)
393 3gvp_A Adenosylhomocysteinase 63.9 5.8 0.0002 40.8 4.5 29 90-119 221-249 (435)
394 2q1s_A Putative nucleotide sug 63.6 6.5 0.00022 38.1 4.7 32 90-121 33-65 (377)
395 2dph_A Formaldehyde dismutase; 63.5 12 0.00041 36.9 6.7 30 91-121 188-218 (398)
396 3zwc_A Peroxisomal bifunctiona 63.4 12 0.00041 40.9 7.2 146 90-257 317-487 (742)
397 3enk_A UDP-glucose 4-epimerase 63.4 7.3 0.00025 36.7 4.9 32 89-121 5-37 (341)
398 1cdo_A Alcohol dehydrogenase; 63.4 11 0.00039 36.6 6.5 29 91-120 195-224 (374)
399 4a0s_A Octenoyl-COA reductase/ 63.2 13 0.00043 37.3 6.8 39 90-132 222-261 (447)
400 1leh_A Leucine dehydrogenase; 63.0 9.2 0.00031 38.2 5.7 36 90-129 174-209 (364)
401 2fzw_A Alcohol dehydrogenase c 62.9 9.4 0.00032 37.2 5.7 29 91-120 193-222 (373)
402 1xgk_A Nitrogen metabolite rep 62.1 6.4 0.00022 38.3 4.3 32 89-121 5-37 (352)
403 2vn8_A Reticulon-4-interacting 62.1 6.7 0.00023 38.4 4.5 31 90-121 185-216 (375)
404 1vl0_A DTDP-4-dehydrorhamnose 62.1 7.3 0.00025 35.9 4.5 31 90-121 13-44 (292)
405 3ehe_A UDP-glucose 4-epimerase 61.9 6.3 0.00022 36.8 4.1 30 90-121 2-32 (313)
406 3k96_A Glycerol-3-phosphate de 61.6 7.8 0.00027 38.3 4.9 40 89-132 29-68 (356)
407 1kew_A RMLB;, DTDP-D-glucose 4 61.5 5.9 0.0002 37.7 3.9 31 91-121 2-33 (361)
408 2h6e_A ADH-4, D-arabinose 1-de 61.5 3.5 0.00012 39.9 2.3 29 91-120 173-203 (344)
409 3oh8_A Nucleoside-diphosphate 61.4 6.8 0.00023 40.2 4.6 31 90-121 148-179 (516)
410 2cdc_A Glucose dehydrogenase g 61.4 5 0.00017 39.1 3.4 31 90-121 182-212 (366)
411 2y0c_A BCEC, UDP-glucose dehyd 61.2 6.9 0.00024 40.3 4.6 40 90-133 9-48 (478)
412 2pk3_A GDP-6-deoxy-D-LYXO-4-he 60.3 8 0.00027 36.1 4.5 31 90-121 13-44 (321)
413 1dlj_A UDP-glucose dehydrogena 59.9 7.3 0.00025 39.0 4.4 37 90-131 1-37 (402)
414 2ewd_A Lactate dehydrogenase,; 59.8 7.7 0.00026 37.4 4.4 32 89-121 4-35 (317)
415 4dup_A Quinone oxidoreductase; 59.7 9.7 0.00033 36.9 5.1 39 90-132 169-208 (353)
416 1oc2_A DTDP-glucose 4,6-dehydr 59.5 6.7 0.00023 37.1 3.9 32 90-121 5-38 (348)
417 2bka_A CC3, TAT-interacting pr 59.5 6.6 0.00023 35.1 3.6 32 90-121 19-52 (242)
418 1sb8_A WBPP; epimerase, 4-epim 59.3 8.4 0.00029 36.7 4.5 31 90-121 28-59 (352)
419 1smk_A Malate dehydrogenase, g 59.3 7.1 0.00024 38.0 4.1 33 88-120 7-41 (326)
420 3obb_A Probable 3-hydroxyisobu 59.1 7.7 0.00026 37.4 4.2 40 90-133 4-43 (300)
421 1v9l_A Glutamate dehydrogenase 59.0 8.8 0.0003 39.3 4.8 32 90-122 211-242 (421)
422 2d5c_A AROE, shikimate 5-dehyd 59.0 7.9 0.00027 36.0 4.2 29 91-120 118-146 (263)
423 2dpo_A L-gulonate 3-dehydrogen 58.7 12 0.00042 36.4 5.6 40 90-133 7-46 (319)
424 2p5y_A UDP-glucose 4-epimerase 58.3 9.6 0.00033 35.5 4.7 30 91-121 2-32 (311)
425 1n2s_A DTDP-4-, DTDP-glucose o 58.0 7.7 0.00026 35.8 3.9 29 91-121 2-31 (299)
426 1eq2_A ADP-L-glycero-D-mannohe 57.9 9.6 0.00033 35.2 4.6 31 91-121 1-32 (310)
427 1tt7_A YHFP; alcohol dehydroge 57.5 5.3 0.00018 38.2 2.8 30 91-121 153-183 (330)
428 3iup_A Putative NADPH:quinone 57.4 14 0.00047 36.3 5.9 39 91-133 173-213 (379)
429 3sxp_A ADP-L-glycero-D-mannohe 57.1 11 0.00036 36.2 4.9 32 89-121 10-44 (362)
430 2vhw_A Alanine dehydrogenase; 57.1 9 0.00031 38.0 4.5 31 90-121 169-199 (377)
431 2i99_A MU-crystallin homolog; 57.0 12 0.0004 36.1 5.2 38 90-129 136-173 (312)
432 3vtf_A UDP-glucose 6-dehydroge 56.7 9.2 0.00032 39.3 4.5 39 90-132 22-60 (444)
433 2jl1_A Triphenylmethane reduct 56.5 6.6 0.00022 36.1 3.1 31 91-121 2-34 (287)
434 1qor_A Quinone oxidoreductase; 56.4 12 0.0004 35.7 5.0 31 90-121 142-173 (327)
435 3ce6_A Adenosylhomocysteinase; 56.4 9.1 0.00031 39.9 4.5 30 90-120 275-304 (494)
436 3orq_A N5-carboxyaminoimidazol 56.2 13 0.00046 36.4 5.5 31 89-120 12-42 (377)
437 3gms_A Putative NADPH:quinone 56.2 7.5 0.00026 37.4 3.6 31 90-121 146-177 (340)
438 3h8v_A Ubiquitin-like modifier 56.2 5 0.00017 39.0 2.4 25 88-112 35-59 (292)
439 2z1m_A GDP-D-mannose dehydrata 55.4 11 0.00037 35.4 4.5 31 90-121 4-35 (345)
440 2v6g_A Progesterone 5-beta-red 55.3 9.4 0.00032 36.3 4.1 32 90-121 2-38 (364)
441 1hyh_A L-hicdh, L-2-hydroxyiso 55.2 9.2 0.00031 36.6 4.0 30 90-119 2-32 (309)
442 1i24_A Sulfolipid biosynthesis 54.8 11 0.00036 36.5 4.5 31 90-121 12-43 (404)
443 4eye_A Probable oxidoreductase 54.8 10 0.00035 36.6 4.3 31 90-121 161-192 (342)
444 1wly_A CAAR, 2-haloacrylate re 54.1 14 0.00048 35.3 5.1 30 91-121 148-178 (333)
445 3k6j_A Protein F01G10.3, confi 53.8 19 0.00066 37.1 6.4 30 90-120 55-84 (460)
446 2j8z_A Quinone oxidoreductase; 53.8 18 0.00063 35.0 6.0 31 90-121 164-195 (354)
447 2csu_A 457AA long hypothetical 53.7 47 0.0016 33.9 9.3 82 90-208 9-94 (457)
448 3q2o_A Phosphoribosylaminoimid 53.7 11 0.00038 37.0 4.5 31 90-121 15-45 (389)
449 3tqh_A Quinone oxidoreductase; 53.5 6.7 0.00023 37.5 2.7 30 91-121 155-185 (321)
450 3d7l_A LIN1944 protein; APC893 53.4 13 0.00045 32.2 4.5 29 91-121 5-34 (202)
451 2hrz_A AGR_C_4963P, nucleoside 53.3 13 0.00044 35.1 4.7 33 89-121 14-53 (342)
452 1udb_A Epimerase, UDP-galactos 53.2 12 0.00041 35.2 4.5 29 91-120 2-31 (338)
453 3pi7_A NADH oxidoreductase; gr 53.1 18 0.00061 34.8 5.8 30 91-121 167-197 (349)
454 1db3_A GDP-mannose 4,6-dehydra 53.0 12 0.00042 35.6 4.5 31 90-121 2-33 (372)
455 3ado_A Lambda-crystallin; L-gu 52.4 17 0.00057 35.7 5.4 36 90-129 7-42 (319)
456 3pqe_A L-LDH, L-lactate dehydr 52.4 11 0.00037 37.1 4.0 30 90-119 6-36 (326)
457 1gpj_A Glutamyl-tRNA reductase 52.2 9.9 0.00034 38.1 3.9 31 90-121 168-199 (404)
458 1pzg_A LDH, lactate dehydrogen 51.9 12 0.00042 36.4 4.4 32 90-122 10-41 (331)
459 1x13_A NAD(P) transhydrogenase 51.5 13 0.00043 37.5 4.5 30 90-120 173-202 (401)
460 1rkx_A CDP-glucose-4,6-dehydra 51.4 13 0.00046 35.3 4.5 31 90-121 10-41 (357)
461 2hk9_A Shikimate dehydrogenase 51.1 11 0.00038 35.4 3.8 31 90-121 130-160 (275)
462 2c0c_A Zinc binding alcohol de 51.0 13 0.00044 36.2 4.4 30 91-121 166-196 (362)
463 1r6d_A TDP-glucose-4,6-dehydra 51.0 14 0.00049 34.7 4.6 31 91-121 2-38 (337)
464 3gaz_A Alcohol dehydrogenase s 50.9 20 0.00068 34.5 5.7 29 90-119 152-181 (343)
465 4eez_A Alcohol dehydrogenase 1 50.8 18 0.00063 34.5 5.4 31 91-121 166-196 (348)
466 3tl2_A Malate dehydrogenase; c 50.7 15 0.00052 35.7 4.8 29 90-119 9-38 (315)
467 2r85_A PURP protein PF1517; AT 50.6 13 0.00044 35.1 4.2 32 88-121 1-32 (334)
468 1a5z_A L-lactate dehydrogenase 50.6 11 0.00038 36.4 3.8 29 90-119 1-31 (319)
469 1ryi_A Glycine oxidase; flavop 50.5 16 0.00054 34.9 4.9 43 78-121 6-48 (382)
470 1kol_A Formaldehyde dehydrogen 50.2 28 0.00097 34.0 6.8 29 91-120 188-217 (398)
471 1b8p_A Protein (malate dehydro 50.2 15 0.00051 35.7 4.7 31 89-119 5-42 (329)
472 3hhp_A Malate dehydrogenase; M 49.8 12 0.00043 36.4 4.0 30 90-119 1-33 (312)
473 1l7d_A Nicotinamide nucleotide 49.5 14 0.00049 36.6 4.5 30 90-120 173-202 (384)
474 1zcj_A Peroxisomal bifunctiona 49.3 20 0.00069 36.5 5.7 30 90-120 38-67 (463)
475 3itj_A Thioredoxin reductase 1 48.5 14 0.00047 34.3 4.0 35 86-121 19-53 (338)
476 1z7e_A Protein aRNA; rossmann 48.4 15 0.00051 38.8 4.7 33 89-121 315-348 (660)
477 2ggs_A 273AA long hypothetical 48.0 15 0.00051 33.3 4.1 29 91-121 2-31 (273)
478 2eez_A Alanine dehydrogenase; 48.0 16 0.00053 36.0 4.5 30 90-120 167-196 (369)
479 2fp4_A Succinyl-COA ligase [GD 47.8 22 0.00075 34.5 5.4 86 90-208 14-101 (305)
480 4f6l_B AUSA reductase domain p 47.7 11 0.00039 38.2 3.5 31 90-121 151-182 (508)
481 3p2y_A Alanine dehydrogenase/p 47.5 13 0.00044 37.5 3.8 30 90-120 185-214 (381)
482 4dim_A Phosphoribosylglycinami 47.5 13 0.00045 36.3 3.8 35 86-121 3-38 (403)
483 4a7p_A UDP-glucose dehydrogena 47.3 16 0.00056 37.3 4.6 32 89-121 8-39 (446)
484 1omo_A Alanine dehydrogenase; 47.2 14 0.00047 35.9 3.8 38 90-129 126-163 (322)
485 1oju_A MDH, malate dehydrogena 47.1 14 0.00049 35.6 3.9 31 90-121 1-32 (294)
486 3o38_A Short chain dehydrogena 46.8 23 0.00078 32.3 5.2 31 90-121 23-55 (266)
487 1gy8_A UDP-galactose 4-epimera 46.6 17 0.00059 35.0 4.5 30 91-121 4-35 (397)
488 1h2b_A Alcohol dehydrogenase; 46.5 25 0.00084 34.1 5.6 38 91-132 189-227 (359)
489 1y6j_A L-lactate dehydrogenase 46.5 17 0.00058 35.2 4.4 30 90-119 8-38 (318)
490 4gx0_A TRKA domain protein; me 46.4 15 0.00051 38.0 4.2 31 90-121 349-379 (565)
491 2p4h_X Vestitone reductase; NA 46.4 18 0.00062 33.6 4.5 29 91-120 3-32 (322)
492 4f6c_A AUSA reductase domain p 46.2 20 0.00068 35.3 4.9 31 90-121 70-101 (427)
493 2dkn_A 3-alpha-hydroxysteroid 46.1 19 0.00066 32.0 4.5 30 91-121 3-33 (255)
494 4gx0_A TRKA domain protein; me 45.9 27 0.00094 36.0 6.2 39 87-129 125-163 (565)
495 3h5n_A MCCB protein; ubiquitin 45.9 16 0.00054 36.1 4.1 24 89-112 118-141 (353)
496 1guz_A Malate dehydrogenase; o 45.5 20 0.00067 34.4 4.7 30 90-119 1-31 (310)
497 3fi9_A Malate dehydrogenase; s 44.6 23 0.00077 35.0 5.0 33 87-119 6-40 (343)
498 1iow_A DD-ligase, DDLB, D-ALA\ 44.4 20 0.00069 33.2 4.4 33 88-121 1-42 (306)
499 4dio_A NAD(P) transhydrogenase 44.3 19 0.00065 36.6 4.5 31 90-122 191-221 (405)
500 1gu7_A Enoyl-[acyl-carrier-pro 43.7 16 0.00054 35.3 3.7 30 91-121 170-200 (364)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=1.5e-121 Score=915.73 Aligned_cols=330 Identities=66% Similarity=1.082 Sum_probs=324.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
+||||||||||||+++|+++++++++||||||+++++++|+|||||||+||+|+++++++ +++|.|||++|++++++||
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~-~~~l~i~Gk~I~v~~e~dp 80 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHD-DKHIIVDGKKIATYQERDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEC-SSEEEETTEEEEEECCSSG
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEc-CCEEEECCEEEEEEeeccc
Confidence 699999999999999999999989999999999899999999999999999999999996 5699999999999999999
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCCcEEeecCccccCCCCcEEecCCchhhhHHhHHH
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAK 249 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~lk 249 (425)
+++||++.|+||||||||.|+++|+|++|+++||||||||+|++|+||||||||++.|+++++||||||||||||+|++|
T Consensus 81 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~lk 160 (332)
T 3pym_A 81 ANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAK 160 (332)
T ss_dssp GGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHHH
T ss_pred ccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred HHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeecccee
Q 014424 250 VVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSV 329 (425)
Q Consensus 250 ~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~~gs~ 329 (425)
+|||+|||++++||||||+|++|+++|+++++|||++|++++||||++||++|+++||||+|+||+++|||||||++||+
T Consensus 161 vL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~ 240 (332)
T 3pym_A 161 VINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSV 240 (332)
T ss_dssp HHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSCEE
T ss_pred HHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCcEe
Confidence 99999999999999999999999999999878999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCcchhh
Q 014424 330 VDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSN 409 (425)
Q Consensus 330 ~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~gys~ 409 (425)
+||+|+|+|++++|||+++|++++||+|||||+|||+|+|||||+||+||||||+.+|++++++|+||++||||||||||
T Consensus 241 ~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~ 320 (332)
T 3pym_A 241 VDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYGYST 320 (332)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECTTHHHHH
T ss_pred eEEEEEECCcCCHHHHHHHHHHhccCccCceeEEEcCCeEeeccCCCCcceEEccccccccCCCEEEEEEEECCccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHH
Q 014424 410 RVLDLIEHMAL 420 (425)
Q Consensus 410 r~vdl~~~~~~ 420 (425)
||+||+.||++
T Consensus 321 r~~dl~~~~~~ 331 (332)
T 3pym_A 321 RVVDLVEHVAK 331 (332)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999975
No 2
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=1.6e-121 Score=917.16 Aligned_cols=334 Identities=72% Similarity=1.146 Sum_probs=326.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccc-eEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~-~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||||||||||+++|+++++++++||||||+++++++|+|||||||+||+|++ +++++++++|.|||++|++++++
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e~ 82 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECCS
T ss_pred ceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEec
Confidence 47999999999999999999999899999999998999999999999999999999 99997544899999999999999
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCCcEEeecCccccCCCCcEEecCCchhhhHHhH
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPL 247 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~ 247 (425)
||+++||++.|+||||||||.|+++|+|++|+++||||||||+|++|+||||||||++.|++.++||||||||||||+|+
T Consensus 83 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~ 162 (337)
T 3v1y_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPL 162 (337)
T ss_dssp SGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred CcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeeccc
Q 014424 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327 (425)
Q Consensus 248 lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~~g 327 (425)
+|+|||+|||++++||||||+|++|+++|+++++|||++|++++||||+++|++|+++||||+|+||+++|||||||++|
T Consensus 163 lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~ 242 (337)
T 3v1y_O 163 AKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDV 242 (337)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSCSSC
T ss_pred HHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCCCCc
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCcch
Q 014424 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGY 407 (425)
Q Consensus 328 s~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~gy 407 (425)
|++||+|+|+|++++|||+++|+++++|+|||||+|||+|+||+||+||+||||||+.+|++++++|+||++||||||||
T Consensus 243 s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gy 322 (337)
T 3v1y_O 243 SVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGY 322 (337)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTTTBTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHH
T ss_pred EEEEEEEEECCCCcHHHHHHHHHHhccCccCCeeEEEcCCEEeeccCCCCcceEEecccCeEECCCEEEEEEEECCccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhh
Q 014424 408 SNRVLDLIEHMALVA 422 (425)
Q Consensus 408 s~r~vdl~~~~~~~~ 422 (425)
||||+||+.||++++
T Consensus 323 s~r~~dl~~~~~~~~ 337 (337)
T 3v1y_O 323 SNRVIDLIRHMAKTQ 337 (337)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhccC
Confidence 999999999998753
No 3
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=1.6e-120 Score=910.93 Aligned_cols=333 Identities=47% Similarity=0.820 Sum_probs=312.6
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
|+||||||||||||+++|+++++++++||||||+ .++++|+|||||||+||+|+++++++ +++|.|||++|++++++|
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~~~v~~~-~~~l~inGk~I~v~~e~d 81 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFDGTVEAF-EDHLLVDGKMIRLLNNRD 81 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEC-SSEEEETTEEEEEECCSC
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCCCcEEEc-CCEEEECCEEEEEeecCC
Confidence 4799999999999999999999989999999998 79999999999999999999999996 569999999999999999
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-CCCcEEeecCccccCC-CCcEEecCCchhhhHHh
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAP 246 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-Dvp~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap 246 (425)
|+++||++.|+||||||||.|+++|+|++|+++||||||||+|++ |+||||||||++.|++ .++||||||||||||+|
T Consensus 82 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~Lap 161 (345)
T 4dib_A 82 PKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAP 161 (345)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred hhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhHH
Confidence 999999999999999999999999999999999999999999997 5999999999999997 68999999999999999
Q ss_pred HHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeecc
Q 014424 247 LAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPN 326 (425)
Q Consensus 247 ~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~~ 326 (425)
++|+|||+|||++++||||||+|++|+++|+++ +|||++|++++||||+++|++|+++||||+|+||++||||||||++
T Consensus 162 ~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 240 (345)
T 4dib_A 162 VVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPN 240 (345)
T ss_dssp HHHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCSS
T ss_pred HHHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCcc
Confidence 999999999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred ceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCcc
Q 014424 327 VSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWG 406 (425)
Q Consensus 327 gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~g 406 (425)
||++||+|+|+|++++|||+++|+++++|+|||||+|||+|+|||||+||+||||||+.+|++++++|+||++|||||||
T Consensus 241 ~s~~dlt~~lek~~t~eei~~~lk~As~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~G 320 (345)
T 4dib_A 241 VSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNEWG 320 (345)
T ss_dssp EEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEETTHH
T ss_pred cEEEEEEEEECCCCCHHHHHHHHHHhhcCcccceeeeEcCcEeeeecCCCCcchhhhhhccEEECCCEEEEEEEECCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhC
Q 014424 407 YSNRVLDLIEHMALVAAH 424 (425)
Q Consensus 407 ys~r~vdl~~~~~~~~~~ 424 (425)
|||||+||+.||+++.++
T Consensus 321 ys~r~~dl~~~~~~~~~~ 338 (345)
T 4dib_A 321 YSRRVVDLVTLVVDELAK 338 (345)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHhhccc
Confidence 999999999999987664
No 4
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=4.8e-120 Score=909.22 Aligned_cols=334 Identities=66% Similarity=1.081 Sum_probs=326.7
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
++||||||||||||+++|++++++ ++||+|||++.++++|+|||||||+||+|+++++++ +++|.|||++|++++++|
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~-~~~l~i~Gk~I~v~~e~d 84 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFR-NGQLVVDNHEISVYQCKE 84 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEE-TTEEEETTEEEEEECCSS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEc-CCEEEECCEEEEEEecCC
Confidence 369999999999999999999987 999999999999999999999999999999999997 569999999999999999
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCCcEEeecCccccCC-CCcEEecCCchhhhHHhH
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPL 247 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap~ 247 (425)
|+++||++.|+||||||||.|+++|+|+.|+++||||||||+|++|+||||||||++.|++ +++||||||||||||+|+
T Consensus 85 p~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap~ 164 (346)
T 3h9e_O 85 PKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPL 164 (346)
T ss_dssp GGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHHH
T ss_pred hhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997 789999999999999999
Q ss_pred HHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeeccc
Q 014424 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327 (425)
Q Consensus 248 lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~~g 327 (425)
+|+|||+|||++++||||||+|++|+++||++++|||++|++++||||++||++|+++||||+|+||+++|||||||++|
T Consensus 165 lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~~ 244 (346)
T 3h9e_O 165 AKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDV 244 (346)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEcccccc
Confidence 99999999999999999999999999999998789999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCcch
Q 014424 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGY 407 (425)
Q Consensus 328 s~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~gy 407 (425)
|++||+|+|+|++++|||+++|++++|++|||||+|||+|+|||||+||+||||||+.+|++++|+|+||++||||||||
T Consensus 245 s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gy 324 (346)
T 3h9e_O 245 SVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGY 324 (346)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHH
T ss_pred eeEEEEEEECCcCCHHHHHHHHHHhccCccCCceeEEcCCeEeeccCCCCCceeEcccccEEecCCEEEEEEEECCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhC
Q 014424 408 SNRVLDLIEHMALVAAH 424 (425)
Q Consensus 408 s~r~vdl~~~~~~~~~~ 424 (425)
||||+||+.||+++++.
T Consensus 325 s~r~~dl~~~~~~~~~~ 341 (346)
T 3h9e_O 325 SHRVVDLLRYMFSRDAE 341 (346)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhhcc
Confidence 99999999999987764
No 5
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=4.1e-120 Score=906.39 Aligned_cols=330 Identities=47% Similarity=0.760 Sum_probs=323.0
Q ss_pred CceeEEEEccChHHHHHHHHHHcC--CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~--~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
|++||||||||||||+++|+++++ ++++||||||+ .++++|+|||||||+||+|+++++++ +++|.|||++|++++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~~~v~~~-~~~l~i~Gk~I~v~~ 78 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFPKEVEVA-GDTIDVGYGPIKVHA 78 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECSSCCEEC-SSEEESSSSEEEEEC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCCCeEEEe-cCEEEECCEEEEEEe
Confidence 678999999999999999999987 68999999998 89999999999999999999999996 569999999999999
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCC-CCcEEeecCccccCCCCcEEecCCchhhhH
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCL 244 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~D-vp~vV~gVN~~~~~~~~~IISnaSCTTn~L 244 (425)
++||+++||++.|+||||||||.|+++|+|++|+++||||||||+|++| +||||||||++.|++.++||||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~L 158 (335)
T 3doc_A 79 VRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCL 158 (335)
T ss_dssp CSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred ecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhh
Confidence 9999999999999999999999999999999999999999999999987 799999999999998889999999999999
Q ss_pred HhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeee
Q 014424 245 APLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPT 324 (425)
Q Consensus 245 ap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv 324 (425)
+|++|+|||+|||++++||||||+|++|+++|+++ +|||++|++++||||+++|++|+++||||+|+||+++|||||||
T Consensus 159 ap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~-kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 237 (335)
T 3doc_A 159 APVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMH-KDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPT 237 (335)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESC
T ss_pred HHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCcc-ccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEecc
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred ccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCC
Q 014424 325 PNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNE 404 (425)
Q Consensus 325 ~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE 404 (425)
++||++||+|+|+|++++|||+++|+++++|+|||||+|||+|+||+||+||+||||||+.+|++++++|+||++|||||
T Consensus 238 ~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE 317 (335)
T 3doc_A 238 PNVSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTDEKLVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDNE 317 (335)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECTT
T ss_pred ccccceEEEEEECCCCCHHHHHHHHHHhhcCCcCCeeEEEcCCeEeeeeCCCCCccccCchhhEEEcCCEEEEEEEEcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHHHH
Q 014424 405 WGYSNRVLDLIEHMAL 420 (425)
Q Consensus 405 ~gys~r~vdl~~~~~~ 420 (425)
|||||||+||+.||++
T Consensus 318 ~gys~r~~dl~~~~~~ 333 (335)
T 3doc_A 318 WGFSSRMSDTAVALGK 333 (335)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHh
Confidence 9999999999999986
No 6
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=1.8e-120 Score=914.65 Aligned_cols=336 Identities=58% Similarity=0.969 Sum_probs=327.0
Q ss_pred CceeEEEEccChHHHHHHHH----HHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEe-------CCCeEEE
Q 014424 88 GNTKVGINGFGRIGRLVLRV----AAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVV-------DDSTLEI 156 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~----l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~-------~~~~l~i 156 (425)
|++||||||||||||+++|+ ++++++++|||||||+.++++|+|||||||+||+|++++++. ++++|.|
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 67899999999999999999 778888999999998899999999999999999999999982 4679999
Q ss_pred CCEEEEEEe-cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-CCCcEEeecCccccCC-CCcE
Q 014424 157 NGKLIKVFS-KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAPMFVVGVNEKTYKP-NMNI 233 (425)
Q Consensus 157 ~Gk~I~v~~-~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-Dvp~vV~gVN~~~~~~-~~~I 233 (425)
||++|++++ +++|+++||++.|+||||||||.|+++|+|++|+++||||||||+|++ |+||||||||++.|++ .++|
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~I 160 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHV 160 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCSE
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCCE
Confidence 999999998 999999999999999999999999999999999999999999999997 7999999999999997 7899
Q ss_pred EecCCchhhhHHhHHHHH-HhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCC
Q 014424 234 VSNASCTTNCLAPLAKVV-HEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLN 312 (425)
Q Consensus 234 ISnaSCTTn~Lap~lk~L-~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~ 312 (425)
|||||||||||+|++|+| ||+|||++++||||||+|++|+++|+++++|||++|++++||||++||++|+++||||+|+
T Consensus 161 ISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~ 240 (359)
T 3ids_C 161 VSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQ 240 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGGT
T ss_pred EECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhhc
Confidence 999999999999999999 9999999999999999999999999999789999999999999999999999999999999
Q ss_pred CceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCccccc-
Q 014424 313 GKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLS- 391 (425)
Q Consensus 313 gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~- 391 (425)
||++||||||||++||++||+|+|+|++++|||+++|+++++++|||||+|||+|+||+||+||+||||||+.+|++++
T Consensus 241 gkltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~ 320 (359)
T 3ids_C 241 GKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSADFINDNRSSIYDSKATLQNNL 320 (359)
T ss_dssp TSEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEHHHHHHSSC
T ss_pred CceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHHHHHhccCccCCceeEecCCEEeeecCCCCcceeEecccceeecc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---CCeEEEEEEeCCCcchhhhHHHHHHHHHHhhh
Q 014424 392 ---ASFMKLVSWYDNEWGYSNRVLDLIEHMALVAA 423 (425)
Q Consensus 392 ---~~~vKl~~WyDNE~gys~r~vdl~~~~~~~~~ 423 (425)
++|+||++||||||||||||+||+.||+++++
T Consensus 321 ~~~~~~vk~~~WYDNE~Gys~r~vdl~~~~~~~~~ 355 (359)
T 3ids_C 321 PKERRFFKIVSWYDNEWGYSHRVVDLVRHMASKDR 355 (359)
T ss_dssp TTCSSEEEEEEEECTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeEEECCCcchHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999998765
No 7
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=5.3e-118 Score=891.31 Aligned_cols=330 Identities=46% Similarity=0.749 Sum_probs=321.2
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
+|++||||||||||||+++|+++++++++||+||| +.++++|+|||||||+||+|+++++++ +++|.|||++|+++++
T Consensus 2 ~m~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind-~~d~~~~a~l~kyDS~hG~f~~~v~~~-~~~l~inGk~I~v~~e 79 (338)
T 3lvf_P 2 SMAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVV-DGGFRVNGKEVKSFSE 79 (338)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSCHHHHHHHHHCCTTTCCCSSCEEEE-TTEEEETTEEEEEECC
T ss_pred CccEEEEEECCCcHHHHHHHHHHHCCCceEEEEec-CCCHHHHHHHhccCCCCCCcCCeEEEc-CCEEEECCEEEEEEEe
Confidence 57799999999999999999999998999999999 689999999999999999999999997 5699999999999999
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-CCCcEEeecCccccCCCCcEEecCCchhhhHH
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLA 245 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-Dvp~vV~gVN~~~~~~~~~IISnaSCTTn~La 245 (425)
+||+++||++.|+||||||||.|+++|+|++|+++||||||||+|++ |+||||||||++.|++.++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~La 159 (338)
T 3lvf_P 80 PDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLA 159 (338)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHH
T ss_pred cccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhH
Confidence 99999999999999999999999999999999999999999999997 69999999999999988899999999999999
Q ss_pred hHHHHHHhhcCeeEEEEEeeeecccccccccCCCCC-cccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeee
Q 014424 246 PLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMK-DWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPT 324 (425)
Q Consensus 246 p~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~k-d~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv 324 (425)
|++|+|||+|||++++||||||+|++|+++|+++++ |||++|++++||||++||++|+++||||+|+||++||||||||
T Consensus 160 p~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 239 (338)
T 3lvf_P 160 PVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPV 239 (338)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCC
Confidence 999999999999999999999999999999999966 9999999999999999999999999999999999999999999
Q ss_pred ccceeeeEEEEecC-CCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCccccc---CCeEEEEEE
Q 014424 325 PNVSVVDLTCRLAK-GASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLS---ASFMKLVSW 400 (425)
Q Consensus 325 ~~gs~~dltv~lek-~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~---~~~vKl~~W 400 (425)
++||++||+|+|+| ++++|||+++|+++++++ |+|||+|+|||||+||+||||||+.+|++++ ++|+||++|
T Consensus 240 ~~~s~~dlt~~lek~~~t~eei~~~lk~As~g~----l~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~vk~~~W 315 (338)
T 3lvf_P 240 ATGSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAW 315 (338)
T ss_dssp SSCEEEEEEEEESSSSCCHHHHHHHHHHTCCSS----EEEECSCCCGGGGTTCCCSEEEEGGGCEEEEETTEEEEEEEEE
T ss_pred CceEEEEEEEEEccCCCCHHHHHHHHHHhhcCC----cccccCCEEeEeeCCCCcceEEecccceEecCCCCCEEEEEEE
Confidence 99999999999999 999999999999999987 9999999999999999999999999999999 899999999
Q ss_pred eCCCcchhhhHHHHHHHHHHhh
Q 014424 401 YDNEWGYSNRVLDLIEHMALVA 422 (425)
Q Consensus 401 yDNE~gys~r~vdl~~~~~~~~ 422 (425)
|||||||||||+||+.||+++.
T Consensus 316 YDNE~gys~r~~dl~~~~~~~~ 337 (338)
T 3lvf_P 316 YDNEMSYTAQLVRTLAYLAELS 337 (338)
T ss_dssp ECTTHHHHHHHHHHHHHHHHHT
T ss_pred ECCccchHHHHHHHHHHHHhhc
Confidence 9999999999999999998753
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=3.5e-117 Score=889.91 Aligned_cols=330 Identities=50% Similarity=0.844 Sum_probs=319.6
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
+|++||||||||||||+++|+|+++ +|+||+|||+ .++++|+|||||||+||+|+++++.+ +++|.|||++|+++++
T Consensus 19 ~~~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~~~v~~~-~~~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 19 PGSMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYNKKVESR-DGAIVVDGREIKIIAE 95 (356)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEE-TTEEEETTEEEEEECC
T ss_pred CCCeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCCCCEEEc-CCEEEECCEEEEEEEc
Confidence 4578999999999999999999999 7999999997 79999999999999999999999987 5699999999999999
Q ss_pred CCCCCCCCcccCcCEEEEccCcccC----HHHHHHHHh-CCCCEEEEeCCCCC-CCcEEeecCccccCCCCcEEecCCch
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTT----IAKASAHMK-GGAKKVVISAPSAD-APMFVVGVNEKTYKPNMNIVSNASCT 240 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s----~e~a~~hl~-aGakkVVISaps~D-vp~vV~gVN~~~~~~~~~IISnaSCT 240 (425)
+||+++||++.|+||||||||.|++ +|+++.|++ +||||||||+|++| +||||||||++.|++.++||||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCT 175 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCT 175 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHH
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccc
Confidence 9999999999999999999999999 999999999 99999999999986 79999999999999878999999999
Q ss_pred hhhHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEE
Q 014424 241 TNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAF 320 (425)
Q Consensus 241 Tn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~av 320 (425)
||||+|++|+|||+|||++++||||||+|++|+++|+++ +|||++|++++||||+++|++|+++||||+|+||++++||
T Consensus 176 Tn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~av 254 (356)
T 3hja_A 176 TNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSM 254 (356)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEE
T ss_pred hhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEE
Confidence 999999999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred EeeeccceeeeEEEEe-cCCCCHHHHHHHHHHhhcCC-CCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEE
Q 014424 321 RVPTPNVSVVDLTCRL-AKGASYEDVKAAIKYASEGS-LKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLV 398 (425)
Q Consensus 321 RVPv~~gs~~dltv~l-ek~~s~eeI~~alk~a~~~~-lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~ 398 (425)
||||++||++||+|+| +|++++|||+++|+++++++ |||||+|+|+|+||+||+||+||||||+.+|++++++|+||+
T Consensus 255 RVPv~~~s~~dlt~~l~ek~~t~eeI~~~lk~Aa~g~~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~ 334 (356)
T 3hja_A 255 RVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKIL 334 (356)
T ss_dssp EESCSSCEEEEEEEEESCTTCCHHHHHHHHHHHHHSTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEECSTTEEEEE
T ss_pred EcCCCccEeEEEEEEEccCCCCHHHHHHHHHHHhcCchhccccceecCCeEeeeccCCCCceEEcCcCCEEEcCCEEEEE
Confidence 9999999999999999 99999999999999999999 999999999999999999999999999999999999999999
Q ss_pred EEeCCCcchhhhHHHHHHHHHH
Q 014424 399 SWYDNEWGYSNRVLDLIEHMAL 420 (425)
Q Consensus 399 ~WyDNE~gys~r~vdl~~~~~~ 420 (425)
+||||||||||||+||+.||++
T Consensus 335 ~WYDNE~Gys~r~vdl~~~~~~ 356 (356)
T 3hja_A 335 SWYDNEFGYSTRVVDLAQKLVK 356 (356)
T ss_dssp EEECTTHHHHHHHHHHHHHHC-
T ss_pred EEECCccchHHHHHHHHHHHhC
Confidence 9999999999999999999963
No 9
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=1.3e-115 Score=878.84 Aligned_cols=333 Identities=64% Similarity=1.037 Sum_probs=322.7
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
|-++||||||||||||+++|+++++++||||+||||+.++++++|||+|||+||+|.++++++ +++|.++|+.|.++++
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~-~~~l~v~Gk~i~v~~~ 87 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHA-DGFLLIGEKKVSVFAE 87 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEE-TTEEEESSCEEEEECC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEc-CCEEEECCEEEEEEEc
Confidence 337899999999999999999999999999999998799999999999999999999999997 5699999999999999
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCC-CCcEEeecCccccCCCCcEEecCCchhhhHH
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLA 245 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~D-vp~vV~gVN~~~~~~~~~IISnaSCTTn~La 245 (425)
+||++++|++.|+||||||||.|+++|+++.|+++||||||||+|++| +||||||||++.|+..++||||||||||||+
T Consensus 88 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~La 167 (345)
T 2b4r_O 88 KDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLA 167 (345)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHHH
Confidence 999999999999999999999999999999999999999999999976 8999999999999976789999999999999
Q ss_pred hHHHHHHhhcCeeEEEEEeeeecccccccccCCC--CCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEee
Q 014424 246 PLAKVVHEEFGILEGLMTTVHATTATQKTVDGPS--MKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 323 (425)
Q Consensus 246 p~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~--~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVP 323 (425)
|++|+|||+|||++++||||||+|++|+++|+++ ++|||++|++++||||+++|++|+++||||+|+||+++||+|||
T Consensus 168 p~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVP 247 (345)
T 2b4r_O 168 PLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVP 247 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEECS
T ss_pred HHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEec
Confidence 9999999999999999999999999999999998 47999999999999999999999999999999999999999999
Q ss_pred eccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCC
Q 014424 324 TPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDN 403 (425)
Q Consensus 324 v~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDN 403 (425)
|++||++||+|+|+|++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+||++||||
T Consensus 248 v~~gs~~dltv~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~~VS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~WyDN 327 (345)
T 2b4r_O 248 IGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDN 327 (345)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEEEEEEEEETTEEEEEEEECT
T ss_pred ccceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCcccccCCCceEEeeCCCCcccccccccCeEecCCEEEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhHHHHHHHHHH
Q 014424 404 EWGYSNRVLDLIEHMAL 420 (425)
Q Consensus 404 E~gys~r~vdl~~~~~~ 420 (425)
||||||||+||+.||++
T Consensus 328 E~gys~r~~dl~~~~~~ 344 (345)
T 2b4r_O 328 EWGYSNRVLDLAVHITT 344 (345)
T ss_dssp THHHHHHHHHHHHHHHC
T ss_pred CcchHhHHHHHHHHHhc
Confidence 99999999999999964
No 10
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=5.6e-115 Score=872.16 Aligned_cols=328 Identities=50% Similarity=0.773 Sum_probs=320.0
Q ss_pred eeEEEEccChHHHHHHHHHHcC---CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 90 TKVGINGFGRIGRLVLRVAAFR---DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~---~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
+||||||||||||+++|+|+++ ++||||+|||+ .++++++|||+|||+||+|+++++++ +++|.++|+.|+++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~~~v~~~-~~~l~v~g~~i~v~~~ 79 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFPGTVSVN-GSYMVVNGDKIRVDAN 79 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEE-TTEEEETTEEEEEECC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCCCCEEEe-CCEEEECCEEEEEEEc
Confidence 6999999999999999999998 89999999995 89999999999999999999999997 5699999999999999
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-CCC-cEEeecCccccCCCCcEEecCCchhhhH
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAP-MFVVGVNEKTYKPNMNIVSNASCTTNCL 244 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-Dvp-~vV~gVN~~~~~~~~~IISnaSCTTn~L 244 (425)
+||++++|++.|+||||||||.|+++|+++.|+++||||||||+|++ |+| |||||||++.|+..++||||||||||||
T Consensus 80 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~L 159 (335)
T 1obf_O 80 RNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNCL 159 (335)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHHH
T ss_pred CCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999997 799 9999999999997678999999999999
Q ss_pred HhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeee
Q 014424 245 APLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPT 324 (425)
Q Consensus 245 ap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv 324 (425)
+|++|+|||+|||++++||||||+|++|+++|+++ +|||++|++++||||++||++|+++||||+|+||+++|||||||
T Consensus 160 ap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv 238 (335)
T 1obf_O 160 APLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYH-EDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPT 238 (335)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccc-cccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEeec
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred ccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCC
Q 014424 325 PNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNE 404 (425)
Q Consensus 325 ~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE 404 (425)
++||++||+|+|+|++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++ +++|+||++|||||
T Consensus 239 ~~~s~~dl~v~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~-~~~~vk~~~WyDNE 317 (335)
T 1obf_O 239 INVSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYNTEPLVSVDYNHDPASSTVDASLTKV-SGRLVKVSSWYDNE 317 (335)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEE-ETTEEEEEEEECTT
T ss_pred cceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCeecccCCceEeeeeCCCCccceeccccccc-cCCEEEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cchhhhHHHHHHHHHHh
Q 014424 405 WGYSNRVLDLIEHMALV 421 (425)
Q Consensus 405 ~gys~r~vdl~~~~~~~ 421 (425)
|||||||+||+.||+++
T Consensus 318 ~gys~r~~dl~~~~~~~ 334 (335)
T 1obf_O 318 WGFSNRMLDTTVALMSA 334 (335)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred cchHhHHHHHHHHHhcc
Confidence 99999999999999754
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=6.5e-115 Score=873.35 Aligned_cols=330 Identities=50% Similarity=0.865 Sum_probs=320.3
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
|++||||||||||||+++|+|+++++||||+||| +.+++|++|||+|||+||+|+++++++ +++|.++|+.|++++++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd-~~~~~~~a~ll~yDs~hG~~~~~v~~~-~~~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGREEIEIVAIND-LTDAKHLAHLLKYDSVHGIFKGSVEAK-DDSIVVDGKEIKVFAQK 78 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTCTTCEEEEEEC-SSCHHHHHHHHHEETTTEECSSCEEEC-SSEEEETTEEEEEECCS
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEec-CCChHHHhhhhhcccccccCCCcEEEc-CCEEEECCEEEEEEEcC
Confidence 5579999999999999999999999999999999 489999999999999999999999987 56999999999999999
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCC-cEEeecCccccCC-CCcEEecCCchhhhHH
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAP-MFVVGVNEKTYKP-NMNIVSNASCTTNCLA 245 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp-~vV~gVN~~~~~~-~~~IISnaSCTTn~La 245 (425)
+|++++|++.|+||||||||.|+++|+++.|+++|||+||||+|++|+| |||||||++.|++ .++||||||||||||+
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999997 5789999999999999
Q ss_pred hHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeec
Q 014424 246 PLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325 (425)
Q Consensus 246 p~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~ 325 (425)
|++|+|||+|||++++||||||+|++|+++|+++ +|||++|++++||||++||++|+++||||+|+||+++|||||||+
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~ 237 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPH-KDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVP 237 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchhhhcCCc-chhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEeccc
Confidence 9999999999999999999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred cceeeeEEEEecC-CCCHHHHHHHHHHhhcC-------CCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEE
Q 014424 326 NVSVVDLTCRLAK-GASYEDVKAAIKYASEG-------SLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKL 397 (425)
Q Consensus 326 ~gs~~dltv~lek-~~s~eeI~~alk~a~~~-------~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl 397 (425)
+||++||+|+|+| ++++|||+++|++++++ +|||||+|+|+|+|||||+||+||||||+.+|+++ ++|+||
T Consensus 238 ~~s~~dltv~lek~~~t~eei~~~lk~a~~~~~~~~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~-~~~vk~ 316 (342)
T 2ep7_A 238 DGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVI-DNLVHI 316 (342)
T ss_dssp SCEEEEEEEEESSCCSCHHHHHHHHHHHHHHHHTSCCGGGTTSEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEE
T ss_pred ceEEEEEEEEEcCCCCCHHHHHHHHHHHhcCCcccccccccccccccCCCeEeeeECCCCccceecccccccc-CCEEEE
Confidence 9999999999999 99999999999999999 99999999999999999999999999999999999 899999
Q ss_pred EEEeCCCcchhhhHHHHHHHHHHh
Q 014424 398 VSWYDNEWGYSNRVLDLIEHMALV 421 (425)
Q Consensus 398 ~~WyDNE~gys~r~vdl~~~~~~~ 421 (425)
++||||||||||||+||+.||+++
T Consensus 317 ~~wyDNE~gys~r~~dl~~~~~~~ 340 (342)
T 2ep7_A 317 AAWYDNEWGYSCRLRDLVIYLAER 340 (342)
T ss_dssp EEEECTTHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCccchhHHHHHHHHHHhc
Confidence 999999999999999999999765
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=6.5e-108 Score=821.76 Aligned_cols=328 Identities=51% Similarity=0.807 Sum_probs=318.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
+||||||||||||+++|+|++| +|+|++|||+ .++++++|||+|||+||+|.++++.+ ++.|.++|+.|.+++++||
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~~~v~~~-~~~l~v~g~~i~v~~~~dp 77 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYD-DQYLYVDGKAIRATAVKDP 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEEC-SSEEEETTEEEEEECCSSG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCCceEEEc-CCEEEECCEEEEEEecCCh
Confidence 4999999999999999999999 8999999995 89999999999999999999999986 5689999999999989999
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCC-CCcEEeecCccccCC-CCcEEecCCchhhhHHhH
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPL 247 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~D-vp~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap~ 247 (425)
++++|++.++||||||||.|+++|+++.|+++|+||||||+|++| +|+||||||++.|++ .++||||||||||||+|+
T Consensus 78 ~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap~ 157 (331)
T 2g82_O 78 KEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPV 157 (331)
T ss_dssp GGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHHH
T ss_pred hhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHHH
Confidence 999999899999999999999999999999999999999999987 899999999999996 478999999999999999
Q ss_pred HHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeeccc
Q 014424 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327 (425)
Q Consensus 248 lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~~g 327 (425)
+|+|||+|||++++||||||+|++|+++|++| +|||++|++++||||+++|++|+++||||+|+||++++|+||||++|
T Consensus 158 lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~g 236 (331)
T 2g82_O 158 MKVLEEAFGVEKALMTTVHSYTNDQRLLDLPH-KDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATG 236 (331)
T ss_dssp HHHHHHHTCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHHhcCccEEEEEEEeecccccchhcccc-ccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCCE
Confidence 99999999999999999999999999999998 79999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCcch
Q 014424 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGY 407 (425)
Q Consensus 328 s~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~gy 407 (425)
|++|++++|+|++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|+++ ++|+|+++||||||||
T Consensus 237 s~~dl~v~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~-~~~~k~~~wydne~gy 315 (331)
T 2g82_O 237 SISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKAL-GNMVKVFAWYDNEWGY 315 (331)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHhhcCccCCccCCCCCCeeeeeeCCCCccceecchhcccc-CCEEEEEEEECCCchh
Confidence 999999999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred hhhHHHHHHHHHHhh
Q 014424 408 SNRVLDLIEHMALVA 422 (425)
Q Consensus 408 s~r~vdl~~~~~~~~ 422 (425)
||||+||+.||++++
T Consensus 316 s~r~~d~~~~~~~~~ 330 (331)
T 2g82_O 316 ANRVADLVELVLRKG 330 (331)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998753
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=2.7e-107 Score=828.95 Aligned_cols=331 Identities=47% Similarity=0.813 Sum_probs=321.3
Q ss_pred CceeEEEEccChHHHHHHHHHHcC--CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~--~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
|++||||||||||||+++|+|++| ++++||+||++ .++++++|||+|||+||+|.++++++ ++.|.++|+.|.+++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~~~v~~~-~~~l~v~g~~i~v~~ 78 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFNADISYD-ENSITVNGKTMKIVC 78 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCCSCEEEE-TTEEEETTEEEEEEC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCCCcEEEe-CCeEEECCeEEEEEe
Confidence 568999999999999999999998 89999999995 79999999999999999999999986 568999999999999
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCC-CC-cEEeecCccccCC-CCcEEecCCchhh
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-AP-MFVVGVNEKTYKP-NMNIVSNASCTTN 242 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~D-vp-~vV~gVN~~~~~~-~~~IISnaSCTTn 242 (425)
++||++++|++.++||||||||.|+++|+++.|+++|+||||||+|++| +| +||||||++.|++ .++||||||||||
T Consensus 79 ~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 9999999998889999999999999999999999999999999999987 78 9999999999997 4789999999999
Q ss_pred hHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEe
Q 014424 243 CLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRV 322 (425)
Q Consensus 243 ~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRV 322 (425)
||+|++|+||++|||++++|||||++|++|+++|++| ++||+||++++||||++||++++++||||+|+||++++|+||
T Consensus 159 ~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~-~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRV 237 (380)
T 2d2i_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRV 237 (380)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccch-hhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEe
Confidence 9999999999999999999999999999999999999 799999999999999999999999999999999999999999
Q ss_pred eeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeC
Q 014424 323 PTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYD 402 (425)
Q Consensus 323 Pv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyD 402 (425)
||++||++|++++|+|++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+||++|||
T Consensus 238 Pt~~gs~~dlt~~l~k~~t~eeI~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~wyD 317 (380)
T 2d2i_A 238 PTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYD 317 (380)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEC
T ss_pred ccCCEEEEEEEEEECCcCCHHHHHHHHHHHhhCCCCCccCCcCCCeeeeeeCCCCcceEEecccCceecCCEEEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHh
Q 014424 403 NEWGYSNRVLDLIEHMALV 421 (425)
Q Consensus 403 NE~gys~r~vdl~~~~~~~ 421 (425)
|||||||||+||+.||+++
T Consensus 318 Ne~gys~r~~d~~~~~~~~ 336 (380)
T 2d2i_A 318 NEWGYSQRVVDLAELAARK 336 (380)
T ss_dssp TTHHHHHHHHHHHHHHHTT
T ss_pred CCcchHhHHHHHHHHHHhh
Confidence 9999999999999999875
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=1.9e-106 Score=812.70 Aligned_cols=331 Identities=49% Similarity=0.802 Sum_probs=320.3
Q ss_pred ceeEEEEccChHHHHHHHHHHcC--CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~--~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
++||||||||||||+++|+|++| |++|||+||| +.++++++|||+|||+||+|.+++.+.+++.|.++|+.|.++++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd-~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~ 79 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVIND-TGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSD 79 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEEC-TTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECC
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEc-CCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEec
Confidence 36999999999999999999999 9999999999 48999999999999999999999994345689999999999999
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCC-CCcEEeecCccccCCCCcEEecCCchhhhHH
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLA 245 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~D-vp~vV~gVN~~~~~~~~~IISnaSCTTn~La 245 (425)
+||++++|++.++||||||||.|+++|+++.|+++|+|+|++|+|+.| +|+||||||++.|++.++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~la 159 (337)
T 1rm4_O 80 RNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLA 159 (337)
T ss_dssp SCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred CChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHHH
Confidence 999999998889999999999999999999999999999999999976 7999999999999866899999999999999
Q ss_pred hHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeec
Q 014424 246 PLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325 (425)
Q Consensus 246 p~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~ 325 (425)
|++|+||++|||++++||||||+|++|+++|++| +|||++|++++||||++||++++++|+||+|+||++++|+||||+
T Consensus 160 p~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~-~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~~ 238 (337)
T 1rm4_O 160 PFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTP 238 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCeeEEEEEEEEecCCccchhhcch-hhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecCC
Confidence 9999999999999999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred cceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCc
Q 014424 326 NVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEW 405 (425)
Q Consensus 326 ~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~ 405 (425)
+||++|++++++|++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+||++||||||
T Consensus 239 ~gs~~dl~~~l~k~~t~eei~~~lk~a~~~~lkgil~y~~~~~vs~d~~~~~~s~i~d~~~~~~~~~~~~k~~~wydne~ 318 (337)
T 1rm4_O 239 NVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEW 318 (337)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTH
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHHHHhhCCcCceecCcCCCeeecccCCCCcccccchhccceecCCEEEEEEEECCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHh
Q 014424 406 GYSNRVLDLIEHMALV 421 (425)
Q Consensus 406 gys~r~vdl~~~~~~~ 421 (425)
||||||+||+.||+++
T Consensus 319 gys~r~~d~~~~~~~~ 334 (337)
T 1rm4_O 319 GYSQRVVDLADIVANK 334 (337)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred cchhhHHHHHHHHhhh
Confidence 9999999999999874
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=1.4e-105 Score=807.41 Aligned_cols=331 Identities=47% Similarity=0.814 Sum_probs=321.2
Q ss_pred CceeEEEEccChHHHHHHHHHHcC--CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~--~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
|++||||||||||||+++|+|++| |+|+||+|||+ .++++++|||+|||+||+|.++++++ ++.|.++|+.|.+++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~~~v~~~-~~~l~v~g~~i~v~~ 78 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFNADISYD-ENSITVNGKTMKIVC 78 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCCSCEEEE-TTEEEETTEEEEEEC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCCCcEEEc-CCeeeecCceEEEEe
Confidence 568999999999999999999999 89999999995 79999999999999999999999986 568999999999999
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCC-CC-cEEeecCccccCC-CCcEEecCCchhh
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-AP-MFVVGVNEKTYKP-NMNIVSNASCTTN 242 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~D-vp-~vV~gVN~~~~~~-~~~IISnaSCTTn 242 (425)
++||++++|++.++|+||||||.|+++++++.|+++|+||||||+|++| +| ++|||||++.|++ .++||||||||||
T Consensus 79 ~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 9999999999889999999999999999999999999999999999987 78 9999999999997 4789999999999
Q ss_pred hHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEe
Q 014424 243 CLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRV 322 (425)
Q Consensus 243 ~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRV 322 (425)
||+|++|+||++|||++++|||||++|++|+++|++| ++||+||++++||||++||++++++||||+|+||++++|+||
T Consensus 159 ~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~-~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rV 237 (339)
T 3b1j_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRV 237 (339)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccch-hhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEe
Confidence 9999999999999999999999999999999999999 799999999999999999999999999999999999999999
Q ss_pred eeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeC
Q 014424 323 PTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYD 402 (425)
Q Consensus 323 Pv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyD 402 (425)
||++||+++++++|+|++++|||+++|+++++++|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|||
T Consensus 238 P~~~g~~~dl~v~l~k~~t~eeI~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 317 (339)
T 3b1j_A 238 PTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYD 317 (339)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHSTTBTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEEC
T ss_pred ccCCEEEEEEEEEEcCcCCHHHHHHHHHHhhcCCCCCccCccCCceeehhcCCCCCceEEecccCceecCCEEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHh
Q 014424 403 NEWGYSNRVLDLIEHMALV 421 (425)
Q Consensus 403 NE~gys~r~vdl~~~~~~~ 421 (425)
|||||||||+||+.||+++
T Consensus 318 ne~gys~r~~d~~~~~~~~ 336 (339)
T 3b1j_A 318 NEWGYSQRVVDLAELAARK 336 (339)
T ss_dssp TTHHHHHHHHHHHHHHHHT
T ss_pred CCcchHhHHHHHHHHHhhh
Confidence 9999999999999999875
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=3.1e-105 Score=803.56 Aligned_cols=329 Identities=54% Similarity=0.857 Sum_probs=319.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
+||||||||||||+++|+|++||+++||+||+. .++++++|||+|||+||+|.++++++ ++.|.++|+.|.+++++||
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~~~v~~~-~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLDAEVSVN-GNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEE-TTEEEETTEEEEEECCSSG
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcCceEEEc-cCcEEECCEEEEEEecCCh
Confidence 799999999999999999999999999999994 79999999999999999999999987 5689999999999989999
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCC-CCcEEeecCccccCC-CCcEEecCCchhhhHHhH
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPL 247 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~D-vp~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap~ 247 (425)
++++|++.++|+||||||.|+++|+++.|+++|+||||||+|++| +|++|||||++.|++ .++||||||||||||+|+
T Consensus 80 ~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap~ 159 (334)
T 3cmc_O 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPF 159 (334)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHHH
T ss_pred hhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHHH
Confidence 999999889999999999999999999999999999999999987 799999999999986 478999999999999999
Q ss_pred HHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeeccc
Q 014424 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327 (425)
Q Consensus 248 lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~~g 327 (425)
+||||++|||++++||||||+|++|+++|++| ++||++|++++||||+++|++++++|+||+|+||++++|+||||++|
T Consensus 160 lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~-~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~g 238 (334)
T 3cmc_O 160 AKVLHEQFGIVRGMMTTVHSYTNDQRILDLPH-KDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238 (334)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHhcCceeeeEEEEEeccchhhhccccc-cccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCCE
Confidence 99999999999999999999999999999998 79999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCcch
Q 014424 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGY 407 (425)
Q Consensus 328 s~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~gy 407 (425)
|+++++++|++++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||||||
T Consensus 239 s~~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gy 318 (334)
T 3cmc_O 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGY 318 (334)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHHhhCccCCcccCCCCCEeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHh
Q 014424 408 SNRVLDLIEHMALV 421 (425)
Q Consensus 408 s~r~vdl~~~~~~~ 421 (425)
||||+||+.||+++
T Consensus 319 s~r~~d~~~~~~~~ 332 (334)
T 3cmc_O 319 SHRVVDLAAYIASK 332 (334)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHhc
Confidence 99999999999765
No 17
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=4.3e-105 Score=807.24 Aligned_cols=334 Identities=65% Similarity=1.051 Sum_probs=319.4
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
++++||||||||||||+++|+|++||+||||+||||..++++++|||+|||+||+|.+.++++ ++.|.+||+.|.++++
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~-~~~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVS-GKDLCINGKVVKVFQA 93 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEEC-C-CEEETTEEEEEECC
T ss_pred CcceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEe-CCEEEECCeEEEEEec
Confidence 346799999999999999999999999999999996689999999999999999999999986 5689999999999999
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCC-CCcEEeecCccccCCC-CcEEecCCchhhhH
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKPN-MNIVSNASCTTNCL 244 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~D-vp~vV~gVN~~~~~~~-~~IISnaSCTTn~L 244 (425)
+||++++|++.++|+||||||.|+++|+++.|+++|+||||||+|++| +|++|||||++.|++. ++||||||||||||
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~l 173 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCL 173 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHH
Confidence 999999998889999999999999999999999999999999999986 7999999999999864 78999999999999
Q ss_pred HhHHHHHHhhcCeeEEEEEeeeecccccccccCCCC--CcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEe
Q 014424 245 APLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSM--KDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRV 322 (425)
Q Consensus 245 ap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~--kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRV 322 (425)
+|++|||+++|||++++||||||+|++|+++|++++ ++||++|++++||||+++|++++++|+||+|+||++++++||
T Consensus 174 ap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~rV 253 (354)
T 3cps_A 174 APLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRV 253 (354)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEEe
Confidence 999999999999999999999999999999999973 689999999999999999999999999999999999999999
Q ss_pred eeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeC
Q 014424 323 PTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYD 402 (425)
Q Consensus 323 Pv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyD 402 (425)
||++||++|++++|++++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+||++|||
T Consensus 254 P~~~gs~~dl~~~l~k~~t~eeI~~~~k~a~~~~lkgil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 333 (354)
T 3cps_A 254 PTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 333 (354)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEEC
T ss_pred ccCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCCCCCccCccCCCeeeEEEcCCCcceEEecccCeEecCCEEEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHh
Q 014424 403 NEWGYSNRVLDLIEHMALV 421 (425)
Q Consensus 403 NE~gys~r~vdl~~~~~~~ 421 (425)
|||||||||+||+.||+++
T Consensus 334 ne~gys~r~~d~~~~~~~~ 352 (354)
T 3cps_A 334 NESGYSNRLVDLAVYVASR 352 (354)
T ss_dssp TTHHHHHHHHHHHHHHHHT
T ss_pred CCcchHhHHHHHHHHHHhc
Confidence 9999999999999999764
No 18
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=2.1e-104 Score=798.49 Aligned_cols=335 Identities=72% Similarity=1.148 Sum_probs=322.2
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCcc-ceEEEeCCCeEEECCEEEEEEe
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFK-GTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~-~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
||++||||||||||||+++|+|.++|+++||+|||++.++++++|||+|||+||+|. +.++..+++.|.++|+.|.+++
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 356899999999999999999999999999999996579999999999999999999 9988723568999999999999
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCCcEEeecCccccCCCCcEEecCCchhhhHH
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLA 245 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp~vV~gVN~~~~~~~~~IISnaSCTTn~La 245 (425)
++||++++|++.++|+||||||.|+++|.++.|+++|+|+||||+|++|+|++|||||++.|++.++||||||||||||+
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la 160 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999866789999999999999
Q ss_pred hHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeec
Q 014424 246 PLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTP 325 (425)
Q Consensus 246 p~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~ 325 (425)
|++||||++|||++++|||+||+|++|+++|++++++||++|++++||||+++|++++++|+||+|+||++++++||||+
T Consensus 161 ~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 240 (337)
T 3e5r_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccC
Confidence 99999999999999999999999999999999987799999999999999999999999999999999999999999999
Q ss_pred cceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCc
Q 014424 326 NVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEW 405 (425)
Q Consensus 326 ~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~ 405 (425)
+||++|++++|++++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||||
T Consensus 241 ~g~~~~l~~~l~k~~t~eei~~~~~~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 320 (337)
T 3e5r_O 241 DVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEW 320 (337)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTH
T ss_pred CeEEEEEEEEECCCccHHHHHHHHHHHhhCCCCCcccCCCCCeeeeeecCCCCceEEecccCcEecCCEEEEEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHh
Q 014424 406 GYSNRVLDLIEHMALV 421 (425)
Q Consensus 406 gys~r~vdl~~~~~~~ 421 (425)
||||||+||+.||+++
T Consensus 321 gys~r~~~~~~~~~~~ 336 (337)
T 3e5r_O 321 GYSNRVIDLIRHMAKT 336 (337)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred chHhHHHHHHHHHhcc
Confidence 9999999999999753
No 19
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.7e-104 Score=795.12 Aligned_cols=328 Identities=51% Similarity=0.856 Sum_probs=318.6
Q ss_pred eeEEEEccChHHHHHHHHHHcC--CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~--~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
+||||||||||||+++|+|++| |+||||+||+. .++++++|||+|||+||+|.++++.+ ++.|.++|+.|.+++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~~~v~~~-~~~l~v~g~~i~v~~~~ 78 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFPGKVEYT-ENSLIVDGKEIKVFAEP 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCSSCEEEC-SSEEEETTEEEEEECCS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcCCcEEEc-CCEEEECCeEEEEEecC
Confidence 4999999999999999999999 99999999994 79999999999999999999999986 56899999999999889
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCC-cEEeecCccccCCCCcEEecCCchhhhHHh
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAP-MFVVGVNEKTYKPNMNIVSNASCTTNCLAP 246 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp-~vV~gVN~~~~~~~~~IISnaSCTTn~Lap 246 (425)
||++++|++.++|+||||||.|+++|+++.|+++|+||||||+|++|+| ++|||||++.|+..++||||||||||||+|
T Consensus 79 dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~lap 158 (332)
T 1hdg_O 79 DPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAP 158 (332)
T ss_dssp SGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred ChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHHH
Confidence 9999999888999999999999999999999999999999999999999 999999999998657899999999999999
Q ss_pred HHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeecc
Q 014424 247 LAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPN 326 (425)
Q Consensus 247 ~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~~ 326 (425)
++|||+++|||++++||||||+|++|+++|+++ ++||++|++++||||++||++++++|+||+|+||++++|+||||++
T Consensus 159 ~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~-~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~~ 237 (332)
T 1hdg_O 159 IVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPH-KDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPD 237 (332)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHhcCeeEeEEEEEEeccchhhhhcCcc-cccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEccccC
Confidence 999999999999999999999999999999998 7999999999999999999999999999999999999999999999
Q ss_pred ceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCcc
Q 014424 327 VSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWG 406 (425)
Q Consensus 327 gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~g 406 (425)
||+++++++|++++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++|||||||
T Consensus 238 g~l~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~g 317 (332)
T 1hdg_O 238 GSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYG 317 (332)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEETTTEEEEEEEECTTHH
T ss_pred cEEEEEEEEECCCCCHHHHHHHHHHHhhcccCCcccccCCCeeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHH
Q 014424 407 YSNRVLDLIEHMAL 420 (425)
Q Consensus 407 ys~r~vdl~~~~~~ 420 (425)
|||||+||+.||++
T Consensus 318 ys~r~~d~~~~~~~ 331 (332)
T 1hdg_O 318 YSNRVVDTLELLLK 331 (332)
T ss_dssp HHHHHHHHHHHGGG
T ss_pred chhHHHHHHHHHhc
Confidence 99999999999864
No 20
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=4.8e-104 Score=793.85 Aligned_cols=328 Identities=69% Similarity=1.097 Sum_probs=318.4
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
++||||||||||||+++|+|++||+++||+||+. .++++++|||+|||+||+|.+.++++ ++.|.+||+.|.+++++|
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~~~v~~~-~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFDGTVEVK-DGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEEE-TTEEEETTEEEEEECCSS
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCCCeEEEc-CCEEEECCEEEEEEEcCC
Confidence 3799999999999999999999999999999994 79999999999999999999999886 568999999999999999
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-CCCcEEeecCccccCCCCcEEecCCchhhhHHhH
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPL 247 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-Dvp~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~ 247 (425)
|++++|++.++|+||||||.|+++|+++.|+++|+|+|++|+|++ |+|++|||||++.|+ .++||||||||||||+|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 999999888999999999999999999999999999999999996 489999999999998 678999999999999999
Q ss_pred HHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeeccc
Q 014424 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNV 327 (425)
Q Consensus 248 lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~~g 327 (425)
+||||++|||++++|||+||+|++|+++|++++++||++|++++||||+++|++++++|+||+|+||++++|+||||++|
T Consensus 158 lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g 237 (330)
T 1gad_O 158 AKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 237 (330)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSSC
T ss_pred HHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccccE
Confidence 99999999999999999999999999999998789999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCcch
Q 014424 328 SVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGY 407 (425)
Q Consensus 328 s~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~gy 407 (425)
|+++++++|++++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||||||
T Consensus 238 ~~~~l~~~l~k~~t~eei~~~~k~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gy 317 (330)
T 1gad_O 238 SVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGY 317 (330)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEETTTCEEEETTEEEEEEEECTTHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHHhcCCCCCEEeeECCceeeeeECCCCcceEEecccCeEecCCEEEEEEEECCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHH
Q 014424 408 SNRVLDLIEHMA 419 (425)
Q Consensus 408 s~r~vdl~~~~~ 419 (425)
||||+||+.||+
T Consensus 318 s~r~~d~~~~~~ 329 (330)
T 1gad_O 318 SNKVLDLIAHIS 329 (330)
T ss_dssp HHHHHHHHHHTT
T ss_pred hhHHHHHHHHhc
Confidence 999999999985
No 21
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=2.9e-103 Score=789.60 Aligned_cols=334 Identities=69% Similarity=1.122 Sum_probs=321.6
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
||++||||||||||||+++|+|.++|+++||+|||++.++++++||++|||+||+|.+.++++ ++.|.++|+.|.++++
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~-~~~l~v~g~~i~v~~~ 79 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAE-NGKLVINGNPITIFQE 79 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEE-TTEEEETTEEEEEECC
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEc-CCeEEECCeEEEEEec
Confidence 466899999999999999999999999999999996579999999999999999999999886 5689999999999999
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCCcEEeecCccccCCCCcEEecCCchhhhHHh
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAP 246 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp~vV~gVN~~~~~~~~~IISnaSCTTn~Lap 246 (425)
+||++++|++.++|+||||||.|+++|.++.|+++|+|+|++|+|++|+|++|||||++.|++.++||||||||||||+|
T Consensus 80 ~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~~ 159 (335)
T 1u8f_O 80 RDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAP 159 (335)
T ss_dssp SSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHHH
T ss_pred CCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHHH
Confidence 99999999888999999999999999999999999999999999988899999999999998667899999999999999
Q ss_pred HHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEeeecc
Q 014424 247 LAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPN 326 (425)
Q Consensus 247 ~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRVPv~~ 326 (425)
++||||++|||++++|||+|++|++|+.+|++++++||++|++++||||+++|++++++|+||+|+||++++++||||++
T Consensus 160 ~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~ 239 (335)
T 1u8f_O 160 LAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTAN 239 (335)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccCC
Confidence 99999999999999999999999999999999867999999999999999999999999999999999999999999999
Q ss_pred ceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCCcc
Q 014424 327 VSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWG 406 (425)
Q Consensus 327 gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE~g 406 (425)
||+++++++|++++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+||++|||||||
T Consensus 240 g~~~~l~~~l~~~~t~eei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~g 319 (335)
T 1u8f_O 240 VSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFG 319 (335)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHH
T ss_pred EEEEEEEEEECCCCCHHHHHHHHHHHhhCccCcEEcccCCCcceeeecCCCCceEEeCCCCEEecCCEEEEEEEEcCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHh
Q 014424 407 YSNRVLDLIEHMALV 421 (425)
Q Consensus 407 ys~r~vdl~~~~~~~ 421 (425)
|||||+||+.||+++
T Consensus 320 y~~r~~~~~~~~~~~ 334 (335)
T 1u8f_O 320 YSNRVVDLMAHMASK 334 (335)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred hHhHHHHHHHHHhcc
Confidence 999999999999764
No 22
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=4.1e-103 Score=789.60 Aligned_cols=331 Identities=38% Similarity=0.647 Sum_probs=309.1
Q ss_pred CceeEEEEccChHHHHHHHHHHc---CCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEE
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAF---RDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~---~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~ 164 (425)
|++||||||||+|||+++|+|++ ||+|+||+||+. .++++++|||+|||+||+|.++++.+ ++.|.++|+.|.++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~~~v~~~-~~~l~v~g~~i~v~ 78 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFAWEVRQE-RDQLFVGDDAIRVL 78 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEEE-TTEEEETTEEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCCceEEEc-CCeeEECCEEEEEE
Confidence 56899999999999999999999 899999999995 79999999999999999999999986 56899999999999
Q ss_pred ecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC-CCCC-cEEeecCccccCCCCcEEecCCchhh
Q 014424 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS-ADAP-MFVVGVNEKTYKPNMNIVSNASCTTN 242 (425)
Q Consensus 165 ~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps-~Dvp-~vV~gVN~~~~~~~~~IISnaSCTTn 242 (425)
+++||++++|++.++|+||||||.|+++|+++.|+++|+||||||+|+ .|+| ++|||||++.|+++.+||||||||||
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn 158 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTN 158 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHH
Confidence 889999999987899999999999999999999999999999999998 6788 99999999999865699999999999
Q ss_pred hHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEEEe
Q 014424 243 CLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRV 322 (425)
Q Consensus 243 ~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~avRV 322 (425)
||+|++||||++|||++++|||+|++|++|+++|++| +|||++|++++||||++||++++++|+||+|+||++++|+||
T Consensus 159 ~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~-~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rV 237 (339)
T 2x5j_O 159 CIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYH-PDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRV 237 (339)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEEC
T ss_pred HHHHHHHHHHHccCcceeeEEEEEecccccccccccc-ccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEe
Confidence 9999999999999999999999999999999999999 799999999999999999999999999999999999999999
Q ss_pred eeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeC
Q 014424 323 PTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYD 402 (425)
Q Consensus 323 Pv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyD 402 (425)
||++||+++++++|++++++|||+++|+++++++|||||+|+|+|+||+||+|++||+|||+.+|++++++|+|+++|||
T Consensus 238 P~~~g~~~~l~v~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 317 (339)
T 2x5j_O 238 PTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCD 317 (339)
T ss_dssp SSCSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEEEEEEEETTTEEEEEEEEC
T ss_pred cccCcEEEEEEEEECCCCCHHHHHHHHHHHhhcCCCcEEcccCCcccccccCCCCCceEEEcccceeccCCEEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHh
Q 014424 403 NEWGYSNRVLDLIEHMALV 421 (425)
Q Consensus 403 NE~gys~r~vdl~~~~~~~ 421 (425)
|||||||||+||+.||+++
T Consensus 318 ne~gys~r~~d~~~~~~~~ 336 (339)
T 2x5j_O 318 NEWGFANRMLDTTLAMATV 336 (339)
T ss_dssp HHHHHHHHHHHHHHHHHCC
T ss_pred CCcccHhHHHHHHHHHhhh
Confidence 9999999999999999764
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.3e-59 Score=470.14 Aligned_cols=240 Identities=20% Similarity=0.238 Sum_probs=216.1
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcc--cccCCc--cceE-EEeCCCeEEECCEEEE
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYD--STHGVF--KGTI-NVVDDSTLEINGKLIK 162 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yD--S~~g~f--~~~v-~~~~~~~l~i~Gk~I~ 162 (425)
||+||||||||+|||+++|+|.++++|+||+|||. ++++++|||+|| ++||+| .+.+ +.+ ++.+.++|
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~-~~~l~v~~---- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDNERVKLFE-DAGIPVEG---- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCHHHHHHHH-HTTCCCCC----
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCCceeeccc-CCeEEECC----
Confidence 45899999999999999999999999999999995 599999999999 999999 5555 333 34566665
Q ss_pred EEecCCCCCCCCcccCcCEEEEccCcccCHHHHH-HHHhCCCCEEEEeCCCC-C-CC-cEEeecCccccCCCCcEEecCC
Q 014424 163 VFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKAS-AHMKGGAKKVVISAPSA-D-AP-MFVVGVNEKTYKPNMNIVSNAS 238 (425)
Q Consensus 163 v~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~-~hl~aGakkVVISaps~-D-vp-~vV~gVN~~~~~~~~~IISnaS 238 (425)
++.++.| ++|+||||||.+.+.+.++ .|+++| ++||+|+|.+ | +| +||||||++.|+. ++||+|||
T Consensus 74 -----~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~s 143 (343)
T 2yyy_A 74 -----TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVVS 143 (343)
T ss_dssp -----BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEECC
T ss_pred -----chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc-CCEEeccc
Confidence 3444545 7999999999999999996 999999 5688999986 6 89 9999999999985 78999999
Q ss_pred chhhhHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecC----CCChhHHHHhhcCCCCCc
Q 014424 239 CTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPS----STGAAKAVGKVLPDLNGK 314 (425)
Q Consensus 239 CTTn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~----~tGaakav~kVLPeL~gk 314 (425)
||||||+|++|+|||+|||++++|||||++|+. + +++|++++||||+ .+|++|+++||||+|+||
T Consensus 144 CtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~-------~----~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~gk 212 (343)
T 2yyy_A 144 CNTTGLCRILYAINSIADIKKARIVLVRRAADP-------N----DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEGK 212 (343)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCT-------T----CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTTS
T ss_pred hhhHHHHHHHHHHHHHcCceEEEEEeeeeccCc-------C----cchhhHHhcccCCCCCCCCcchHHHHHhhhccccc
Confidence 999999999999999999999999999999982 2 5678899999999 999999999999999999
Q ss_pred eeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcC
Q 014424 315 LTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEG 355 (425)
Q Consensus 315 it~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~ 355 (425)
++++|+||||++||+++++++|++++++|||+++|+++++.
T Consensus 213 l~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a~~v 253 (343)
T 2yyy_A 213 ILTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIKKTPRI 253 (343)
T ss_dssp EEEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHHHSTTE
T ss_pred eeeEEEEecccceEEEEEEEEECCCCCHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999864
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-48 Score=391.58 Aligned_cols=290 Identities=22% Similarity=0.239 Sum_probs=231.3
Q ss_pred eeEEEEc-cChHHHHHHHHHHcC--CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 90 TKVGING-FGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~--~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
||||||| ||+|||+++|+|+++ |.++++.+.. . +. .++.+.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s--------------~----------~~-~g~~l~~~g~~i~v~~~ 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYAS--------------P----------RS-AGVRLAFRGEEIPVEPL 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEEC--------------G----------GG-SSCEEEETTEEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeec--------------c----------cc-CCCEEEEcCceEEEEeC
Confidence 4999999 999999999999954 4344322111 0 01 14578899999999866
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC---CCCCcEEeecCccccCCCCcEEecCCchhhh
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYKPNMNIVSNASCTTNC 243 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps---~Dvp~vV~gVN~~~~~~~~~IISnaSCTTn~ 243 (425)
+++ +| ++|+||+|+|.|.++++++.|+++|++.|.+|++. +|+|++|||||++.|+..++||+||||||||
T Consensus 56 -~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt~ 129 (331)
T 2yv3_A 56 -PEG--PL---PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTAI 129 (331)
T ss_dssp -CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHHH
T ss_pred -Chh--hc---CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHHH
Confidence 554 58 79999999999999999999999999555555543 2689999999999998656799999999999
Q ss_pred HHhHHHHHHhhcCeeEEEEEeeeecccc------------cccccCCCCCcccCcccCcceeecCC--------CChhHH
Q 014424 244 LAPLAKVVHEEFGILEGLMTTVHATTAT------------QKTVDGPSMKDWRGGRGASQNIIPSS--------TGAAKA 303 (425)
Q Consensus 244 Lap~lk~L~d~fGI~~~~~TTvhAvt~~------------q~~vDg~~~kd~r~gr~aa~NIIP~~--------tGaaka 303 (425)
|+|+||||+++|||+++.|||+|++||+ |+++|+++.++|+++|++++||||++ |++++.
T Consensus 130 ~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~~ 209 (331)
T 2yv3_A 130 LAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEMK 209 (331)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHHH
T ss_pred HHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHHH
Confidence 9999999999999999999999999999 88899876679999999999999998 777766
Q ss_pred H----Hhhc--CCCCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCcccc------ccCCceEee
Q 014424 304 V----GKVL--PDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILG------YTDEDVVSN 371 (425)
Q Consensus 304 v----~kVL--PeL~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~------yte~~~VS~ 371 (425)
+ +|+| |+|+ ++++|+|||+++||++++++++++++++|||+++|++++- --++. |++ | .
T Consensus 210 i~~e~~kil~~~~l~--v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~~~---v~v~~~~~~~~~p~-~---~ 280 (331)
T 2yv3_A 210 VVWETHKIFGDDTIR--ISATAVRVPTLRAHAEAVSVEFARPVTPEAAREVLKEAPG---VEVVDEPEAKRYPM-P---L 280 (331)
T ss_dssp HHHHHHHHTTCTTCE--EEEECCBCSCSSEEEEEEEEEESSCCCHHHHHHHHTTSTT---CCBCCBTTTTBCCC-H---H
T ss_pred HHHHHHHHhCCCCce--EEEEEEEeccCceEEEEEEEEECCCCCHHHHHHHHHcCCC---eEEEeCCCcCCCCC-h---h
Confidence 7 8999 8876 9999999999999999999999999999999999998552 12221 221 1 1
Q ss_pred cCCCCCcceEeeCCCcccccCCeEEEEEEeCCC-cchhhhHHHHHHHHHH
Q 014424 372 DFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNE-WGYSNRVLDLIEHMAL 420 (425)
Q Consensus 372 Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE-~gys~r~vdl~~~~~~ 420 (425)
+..|..+-.|--...... .++.+.+++|.||- +|.|-+-|-.|+.|..
T Consensus 281 ~~~g~~~~~igr~~~d~~-~~~~l~~~~~~DNl~kGAAg~AVq~~nl~~~ 329 (331)
T 2yv3_A 281 TASGKWDVEVGRIRKSLA-FENGLDFFVVGDQLLKGAALNAVQIAEEWLK 329 (331)
T ss_dssp HHTTCSSEEEEEEEECSS-STTEEEEEEEEETTHHHHTTHHHHHHHHHC-
T ss_pred hccCCceEEEEEEEECCC-CCCEEEEEEEechHHHHHHHHHHHHHHHHhh
Confidence 445544444421111111 34678999999999 9999999988888753
No 25
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.1e-48 Score=393.50 Aligned_cols=300 Identities=15% Similarity=0.124 Sum_probs=237.4
Q ss_pred CceeEEEEc-cChHHHHHHHHHH--cCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEE
Q 014424 88 GNTKVGING-FGRIGRLVLRVAA--FRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~--~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~ 164 (425)
|++||+|+| ||+||++++|+|+ .+|.++++++++.. .. ++.+.++|+.+.+.
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~--------------~~-----------g~~~~~~g~~i~~~ 59 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE--------------SA-----------GQRMGFAESSLRVG 59 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT--------------TT-----------TCEEEETTEEEECE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC--------------CC-----------CCccccCCcceEEe
Confidence 457999999 9999999999999 66889999998731 01 12344677777665
Q ss_pred ecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC--CCCcEEeecCccccCCCC--cEEecCCch
Q 014424 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA--DAPMFVVGVNEKTYKPNM--NIVSNASCT 240 (425)
Q Consensus 165 ~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~--Dvp~vV~gVN~~~~~~~~--~IISnaSCT 240 (425)
+.+++. |. ++|+||+|+|.+.+++.++.|+++|+|+|++|++.. ++|++|||||++.|+..+ +||+|||||
T Consensus 60 -~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~ 134 (340)
T 2hjs_A 60 -DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAV 134 (340)
T ss_dssp -EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHH
T ss_pred -cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHH
Confidence 334543 74 899999999999999999999999999888888874 479999999999998532 799999999
Q ss_pred hhhHHhHHHHHHhhcCeeEEEEEeeeecccccc-cccCCCC--CcccC---------cccCcceeecCCC-----Ch---
Q 014424 241 TNCLAPLAKVVHEEFGILEGLMTTVHATTATQK-TVDGPSM--KDWRG---------GRGASQNIIPSST-----GA--- 300 (425)
Q Consensus 241 Tn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~-~vDg~~~--kd~r~---------gr~aa~NIIP~~t-----Ga--- 300 (425)
||||+|+++||+++|||++++|||+|++||+|+ .+|+++. ++||+ +|++++|+||+++ |+
T Consensus 135 tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~E 214 (340)
T 2hjs_A 135 AAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAI 214 (340)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBHH
T ss_pred HHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccHH
Confidence 999999999999999999999999999999996 5776442 35655 4778999999987 74
Q ss_pred ----hHHHHhhcCCCCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCC
Q 014424 301 ----AKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGD 376 (425)
Q Consensus 301 ----akav~kVLPeL~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~ 376 (425)
.++++||||++++|++++|+||||++||+++++++|++++++|||+++|++++ +--++...+-|-.-.|..|.
T Consensus 215 e~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~~---~V~v~~~~~~p~~~~~v~g~ 291 (340)
T 2hjs_A 215 ERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDATK---GIEWVGEGDYPTVVGDALGQ 291 (340)
T ss_dssp HHHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHST---TEEECCTTCCCCCCCCCTTS
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCCCCHHHHHHHHhcCC---CcEEeCCCCCCccHHHcCCC
Confidence 45568899999999999999999999999999999999999999999999744 22233211112111145555
Q ss_pred CcceEeeCCCcccccCCeEEEEEEeCC-CcchhhhHHHHHHHHHHh
Q 014424 377 SRSSIFDAKAGIGLSASFMKLVSWYDN-EWGYSNRVLDLIEHMALV 421 (425)
Q Consensus 377 ~~s~i~d~~~~~~~~~~~vKl~~WyDN-E~gys~r~vdl~~~~~~~ 421 (425)
.+..|--...... .++.+.+++|.|| .+|.|-.-+-.++.|...
T Consensus 292 ~~~~vgr~r~~~~-~~~~l~~~~~~DNl~kGAA~~avq~~~l~~~~ 336 (340)
T 2hjs_A 292 DETYVGRVRAGQA-DPCQVNLWIVSDNVRKGAALNAVLLGELLIKH 336 (340)
T ss_dssp SCEEEEEEEECSS-CTTEEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEecCC-CCCEEEEEEEechHHHHHHHHHHHHHHHHHHh
Confidence 4444433222221 3567899999999 999999999999888653
No 26
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=9.5e-48 Score=386.16 Aligned_cols=298 Identities=19% Similarity=0.172 Sum_probs=219.4
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcC--CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~--~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
++||||+| ||+||++++|+|+++ |++++++|++.. +. ++.+.++|+.+.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-~~------------------------G~~~~~~~~~i~~~- 56 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-SE------------------------GKTYRFNGKTVRVQ- 56 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-TT------------------------TCEEEETTEEEEEE-
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-CC------------------------CCceeecCceeEEe-
Confidence 47999999 999999999999998 889999998731 00 22445777777774
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC---CCCCcEEeecCccccCCC--CcEEecCCch
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYKPN--MNIVSNASCT 240 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps---~Dvp~vV~gVN~~~~~~~--~~IISnaSCT 240 (425)
+.+++ +|. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. +|+|++|||||++.|+.. .+||+|||||
T Consensus 57 ~~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C~ 132 (336)
T 2r00_A 57 NVEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNCS 132 (336)
T ss_dssp EGGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCHH
T ss_pred cCChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCChH
Confidence 44443 674 89999999999999999999999999655556554 268999999999999852 6799999999
Q ss_pred hhhHHhHHHHHHhhcCeeEEEEEeeeecccccc-cccCCCC-----------CcccCcccCcceeecCCC-----Ch---
Q 014424 241 TNCLAPLAKVVHEEFGILEGLMTTVHATTATQK-TVDGPSM-----------KDWRGGRGASQNIIPSST-----GA--- 300 (425)
Q Consensus 241 Tn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~-~vDg~~~-----------kd~r~gr~aa~NIIP~~t-----Ga--- 300 (425)
||||+|+|+||+++|||+++.|||+|++||+|+ .+|+++. .+++++|++++|+||+++ |+
T Consensus 133 tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~E 212 (336)
T 2r00_A 133 TIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTKE 212 (336)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSCBHH
T ss_pred HHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccHH
Confidence 999999999999999999999999999999974 8888763 278999999999999975 74
Q ss_pred ----hHHHHhhcCCCCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCC
Q 014424 301 ----AKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGD 376 (425)
Q Consensus 301 ----akav~kVLPeL~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~ 376 (425)
.++++||||++++|++++|+||||++||++++++++++++++|||+++|++++ +--++...+-|-.-.+..|.
T Consensus 213 e~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~~t~~ei~~~~~~~~---~v~v~~~~~~p~~~~~v~g~ 289 (336)
T 2r00_A 213 EMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAPIDAEQVMDMLEQTD---GIELFRGADFPTQVRDAGGK 289 (336)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSCCCHHHHHHHHHHST---TEEECCCCSSGGGCCCCCSS
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCCCCHHHHHHHHHhCC---CeEEECCCCCCcCHHHhCCC
Confidence 46678899999999999999999999999999999999999999999999843 22222211112111144444
Q ss_pred CcceEeeCCCcccccCCeEEEEEEeCCC-cchhhhHHHHHHHHHH
Q 014424 377 SRSSIFDAKAGIGLSASFMKLVSWYDNE-WGYSNRVLDLIEHMAL 420 (425)
Q Consensus 377 ~~s~i~d~~~~~~~~~~~vKl~~WyDNE-~gys~r~vdl~~~~~~ 420 (425)
.+-.|--...... .++.+.++++.||- +|-|-+-|-.|+.|..
T Consensus 290 ~~~~vgr~~~d~~-~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~~ 333 (336)
T 2r00_A 290 DHVLVGRVRNDIS-HHSGINLWVVADNVRKGAATNAVQIAELLVR 333 (336)
T ss_dssp SCEEEEEEEEETT-EEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEecCC-CCCEEEEEEEehhHHHhHHHHHHHHHHHHHh
Confidence 4333321111110 23467899999998 8999998888888764
No 27
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.3e-49 Score=398.22 Aligned_cols=273 Identities=19% Similarity=0.265 Sum_probs=221.6
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcc--cccCCccceE-EEeCCCeEEECCEEEEEEe
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYD--STHGVFKGTI-NVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yD--S~~g~f~~~v-~~~~~~~l~i~Gk~I~v~~ 165 (425)
|+||||+|+|+|||+++|+|.++|+|++++|++. ++++.+++++|+ ++||+|.+.+ ..+ +..+.+++.
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~~~v~~~~-~~~l~v~~~------ 71 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIPERVKLFE-KAGIEVAGT------ 71 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSGGGHHHHH-HTTCCCCEE------
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccccceeeec-CCceEEcCC------
Confidence 3799999999999999999999999999999995 577888999988 8999988754 222 223545431
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-CC--CcEEeecCccccCCCCcEEecCCchhh
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DA--PMFVVGVNEKTYKPNMNIVSNASCTTN 242 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-Dv--p~vV~gVN~~~~~~~~~IISnaSCTTn 242 (425)
++++. .++|+||+|||.+.+.+.++.|+++|++ ||.++|.+ |+ |++|||||++.++. .+||+|||||||
T Consensus 72 ---~~~~~---~~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt 143 (337)
T 1cf2_P 72 ---VDDML---DEADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTT 143 (337)
T ss_dssp ---HHHHH---HTCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHH
T ss_pred ---HHHHh---cCCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHH
Confidence 22221 2799999999999999999999999965 77777765 44 99999999999985 689999999999
Q ss_pred hHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecC----CCChhHHHHhhcCCCCCceeEE
Q 014424 243 CLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPS----STGAAKAVGKVLPDLNGKLTGM 318 (425)
Q Consensus 243 ~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~----~tGaakav~kVLPeL~gkit~~ 318 (425)
||+|+||||+++|||+++.|||+|++|+ ++ +.+|++++||+|+ .++.+++++|+| +|+ ++++
T Consensus 144 ~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p~----~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l~--v~~t 209 (337)
T 1cf2_P 144 GLCRTLKPLHDSFGIKKVRAVIVRRGAD-------PA----QVSKGPINAIIPNPPKLPSHHGPDVKTVL-DIN--IDTM 209 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEESSC-------TT----CTTCCCSSCCEESSSSSSCTHHHHHHTTS-CCC--EEEE
T ss_pred HHHHHHHHHHHhcCcceeEEEEEEEeec-------CC----ccccchhcCEEeccCCCCCcchHHHHhhh-eeE--EEEE
Confidence 9999999999999999999999999887 22 4566889999999 688889999999 885 9999
Q ss_pred EEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccCCceEeecCCCCCcceEeeCCC--cccccCCeEE
Q 014424 319 AFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKA--GIGLSASFMK 396 (425)
Q Consensus 319 avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte~~~VS~Df~~~~~s~i~d~~~--~~~~~~~~vK 396 (425)
|+||||++||+++++++|++++++|||+++|++++...+ .++ +++.++.+.+|+... +...+| +.+
T Consensus 210 ~~rVPv~~g~~~~~~v~l~~~~t~eei~~~~~~~~~v~v------~~~-----~~~~~~~~~~~~~~~~~gr~r~d-~~~ 277 (337)
T 1cf2_P 210 AVIVPTTLMHQHNVMVEVEETPTVDDIIDVFEDTPRVIL------ISA-----EDGLTSTAEIMEYAKELGRSRND-LFE 277 (337)
T ss_dssp EEEESCCSCEEEEEEEEESSCCCHHHHHHHHHHSTTEEE------ECT-----TTTCCSHHHHHHHHHHHTCGGGC-CCS
T ss_pred EEEcCccCeEEEEEEEEECCCCCHHHHHHHHHhCCCcEE------ecc-----ccCCCCCcchhhhhhhcCCCccC-chh
Confidence 999999999999999999999999999999999864321 111 222333444443332 444444 788
Q ss_pred EEEEeCCC
Q 014424 397 LVSWYDNE 404 (425)
Q Consensus 397 l~~WyDNE 404 (425)
+..||||=
T Consensus 278 ~~~w~~~~ 285 (337)
T 1cf2_P 278 IPVWRESI 285 (337)
T ss_dssp EEEEGGGC
T ss_pred heeehhee
Confidence 99999974
No 28
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.3e-45 Score=371.33 Aligned_cols=225 Identities=17% Similarity=0.247 Sum_probs=189.9
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
+||||+|+|+|||.++|+|.++|+++|++|+|. ++++..++++|+. + .++..+++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~--~~~~~~~~a~~~g----~-------------------~~~~~~~~ 56 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT--SPNYEAFIAHRRG----I-------------------RIYVPQQS 56 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--SCSHHHHHHHHTT----C-------------------CEECCGGG
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC--ChHHHHHHHHhcC----c-------------------ceecCcCH
Confidence 799999999999999999999999999999995 5677778887641 0 11111122
Q ss_pred CCCCCcc-------------cCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCC--CCcEEeecCccccCCCCcEE
Q 014424 170 AEIPWGD-------------YGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD--APMFVVGVNEKTYKPNMNIV 234 (425)
Q Consensus 170 ~~i~W~~-------------~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~D--vp~vV~gVN~~~~~~~~~II 234 (425)
+++ |++ .++|+||+|||.+.+.+.++.|+++|+|+|++|++..+ +++||+++|++.+.. .++|
T Consensus 57 ~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iI 134 (340)
T 1b7g_O 57 IKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYI 134 (340)
T ss_dssp HHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEE
T ss_pred HHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCc
Confidence 222 321 26999999999999999999999999999999988754 479999999655432 4599
Q ss_pred ecCCchhhhHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecC----CCChhHHHHhhcCC
Q 014424 235 SNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPS----STGAAKAVGKVLPD 310 (425)
Q Consensus 235 SnaSCTTn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~----~tGaakav~kVLPe 310 (425)
+|||||||||+|++|+|+++|||++++|||+|+++. ++ ++ .|++..||+|. .+|+++++++++|+
T Consensus 135 snpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~-------~~-~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~ 203 (340)
T 1b7g_O 135 RVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD-------QK-EV---KKGPINSLVPDPATVPSHHAKDVNSVIRN 203 (340)
T ss_dssp EECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC-------TT-CC---SCCCSSCCEESSSSSSCTHHHHHHTTSTT
T ss_pred ccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC-------cc-cc---hHHHHcCCCCCCcCCCCCchhHHHHhCCC
Confidence 999999999999999999999999999999997752 33 33 45788999987 68999999999999
Q ss_pred CCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhc
Q 014424 311 LNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASE 354 (425)
Q Consensus 311 L~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~ 354 (425)
|+ ++++|+||||++||+++++++|++++++|||+++|+++++
T Consensus 204 l~--l~~~a~rVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a~~ 245 (340)
T 1b7g_O 204 LD--IATMAVIAPTTLMHMHFINITLKDKVEKKDILSVLENTPR 245 (340)
T ss_dssp CE--EEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHTCTT
T ss_pred Cc--EEEEEEEeccCCeEEEEEEEEECCCCCHHHHHHHHHcCCC
Confidence 87 9999999999999999999999999999999999998875
No 29
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.9e-45 Score=367.22 Aligned_cols=237 Identities=23% Similarity=0.285 Sum_probs=205.4
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcc--cccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYD--STHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yD--S~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
|++||||+|+|+|||.++|+|.++|+++|++|+|. +++++.++++|+ ++||+|.+.+...+++.+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~------- 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAG------- 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSC-------
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCccccccccccceeccCCceEEcC-------
Confidence 56899999999999999999999999999999995 578888999988 8899988765111111222322
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-C-C-CcEEeecCccccCCCCcEEecCCchhh
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-D-A-PMFVVGVNEKTYKPNMNIVSNASCTTN 242 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-D-v-p~vV~gVN~~~~~~~~~IISnaSCTTn 242 (425)
+++++.| ++|+||+||+.+...+.++.|+++| |+|++++|.+ | . |++|||||++.|+. +++|+||||+||
T Consensus 72 --d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~t~ 144 (334)
T 2czc_A 72 --TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCNTT 144 (334)
T ss_dssp --BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHHHH
T ss_pred --cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCcHHH
Confidence 3333333 7999999999999999999999999 6788999975 5 4 59999999998874 689999999999
Q ss_pred hHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecC---CCChhHHHHhhcCCCCCceeEEE
Q 014424 243 CLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPS---STGAAKAVGKVLPDLNGKLTGMA 319 (425)
Q Consensus 243 ~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~---~tGaakav~kVLPeL~gkit~~a 319 (425)
||+|++|+|++. |+++.|+|+|++++. ||++|++++||+|+ .+|++++++++|| |+ ++++|
T Consensus 145 ~l~P~~~~l~~~--I~~g~i~ti~a~s~~-----------~~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~~~ 208 (334)
T 2czc_A 145 GLVRTLSAIREY--ADYVYAVMIRRAADP-----------NDTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IETMA 208 (334)
T ss_dssp HHHHHHHHHGGG--EEEEEEEEEEESSCT-----------TCCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEEEE
T ss_pred HHHHHHHHHHHH--hccccEEEEEEecCc-----------cccccChhhcEEeccCCCCchhhhhheEEE-EE--EEEEE
Confidence 999999999987 999999999999985 46778999999999 8999999999999 87 99999
Q ss_pred EEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCC
Q 014424 320 FRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGS 356 (425)
Q Consensus 320 vRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~ 356 (425)
+||||++||++++++++++++++||++++|+++++..
T Consensus 209 ~rVPv~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~~ 245 (334)
T 2czc_A 209 FVVPTTLMHVHSVMVELKKPLTKDDVIDIFENTTRVL 245 (334)
T ss_dssp EEESCSSCEEEEEEEEESSCCCHHHHHHHHHTSTTEE
T ss_pred EEcCCCceEEEEEEEEECCCCCHHHHHHHHHhccCCE
Confidence 9999999999999999999999999999999998653
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=1.9e-45 Score=373.67 Aligned_cols=237 Identities=19% Similarity=0.180 Sum_probs=197.4
Q ss_pred eeEEEEc-cChHHHHHHH-HHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 90 TKVGING-FGRIGRLVLR-VAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr-~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
+||||+| ||+||++++| +|.+| ++++++| |+|.|+| +|+- +. .++|+.+.+....
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~-~~~~v~i-----------~~~~~~s-~G~~---v~-------~~~g~~i~~~~~~ 58 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEER-DFDAIRP-----------VFFSTSQ-LGQA---AP-------SFGGTTGTLQDAF 58 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-GGGGSEE-----------EEEESSS-TTSB---CC-------GGGTCCCBCEETT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcC-CCCeEEE-----------EEEEeCC-CCCC---cc-------ccCCCceEEEecC
Confidence 6999999 9999999999 66666 4654433 5677776 7761 11 1334556666544
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-----CCCcEEeecCccccCCC--C--cEEecCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKPN--M--NIVSNAS 238 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-----Dvp~vV~gVN~~~~~~~--~--~IISnaS 238 (425)
+++. |. ++|+||+|+|.+.+++.++.|+++|+|++||+++++ |+|++|||||++.|+.. + ++|+|||
T Consensus 59 ~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp~ 134 (367)
T 1t4b_A 59 DLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGN 134 (367)
T ss_dssp CHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeCC
Confidence 4443 64 899999999999999999999999999999999985 68999999999998742 2 6999999
Q ss_pred chhhhHHhHHHHHHhhcCeeEEEEEeeeeccccccc-------------------ccCCCCC--cccC------------
Q 014424 239 CTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKT-------------------VDGPSMK--DWRG------------ 285 (425)
Q Consensus 239 CTTn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~-------------------vDg~~~k--d~r~------------ 285 (425)
|||||++|+|+||+++|+|+++.|||||++||+++- +|+++.+ ||||
T Consensus 135 Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~~ 214 (367)
T 1t4b_A 135 CTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELP 214 (367)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccccCc
Confidence 999999999999999999999999999999999531 4556521 6655
Q ss_pred ----cccCcceeecCCCC------------hhHHHHhhcCC-CCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHH
Q 014424 286 ----GRGASQNIIPSSTG------------AAKAVGKVLPD-LNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAA 348 (425)
Q Consensus 286 ----gr~aa~NIIP~~tG------------aakav~kVLPe-L~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~a 348 (425)
++.+++|+||+++| ..++++|++|+ ...+++++|+|||+++||++++++++++++++|||+++
T Consensus 215 ~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~~t~eei~~~ 294 (367)
T 1t4b_A 215 VDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEEL 294 (367)
T ss_dssp CTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSCCCHHHHHHH
T ss_pred ccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCCCCHHHHHHH
Confidence 68899999999987 66888999976 56689999999999999999999999999999999999
Q ss_pred HHHhh
Q 014424 349 IKYAS 353 (425)
Q Consensus 349 lk~a~ 353 (425)
|++++
T Consensus 295 l~~~~ 299 (367)
T 1t4b_A 295 LAAHN 299 (367)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 99985
No 31
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=2.4e-42 Score=349.89 Aligned_cols=295 Identities=16% Similarity=0.109 Sum_probs=223.5
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+| ||+||++++|+|.++|++++++|++. .+. -++|+++|++|.+.+ . . .+.+ ++
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~-~~~-----g~~~~~~~~~~~~~v-~--~-dl~~--------~~- 76 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD-RKA-----GQSMESVFPHLRAQK-L--P-TLVS--------VK- 76 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS-TTT-----TSCHHHHCGGGTTSC-C--C-CCBC--------GG-
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc-hhc-----CCCHHHhCchhcCcc-c--c-ccee--------cc-
Confidence 58999999 99999999999999999999999984 222 257899999887653 1 0 1211 11
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-CC------------------CcEEeec---Ccc
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DA------------------PMFVVGV---NEK 225 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-Dv------------------p~vV~gV---N~~ 225 (425)
++ .|. ++|+||+|||.+.+++.++.| ++|++.+.+|++.. +. |.+|||+ |++
T Consensus 77 --~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n~~ 150 (359)
T 1xyg_A 77 --DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEILRE 150 (359)
T ss_dssp --GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTCEEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHHHH
T ss_pred --hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCCEEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCccCHH
Confidence 22 574 899999999999999999999 99995444444331 22 4677777 999
Q ss_pred ccCCCCcEEecCCchhhhHHhHHHHHHhhcCee--EEEEEeeeecccccc-cccCCCCCcccCcccCcceeecCCCChhH
Q 014424 226 TYKPNMNIVSNASCTTNCLAPLAKVVHEEFGIL--EGLMTTVHATTATQK-TVDGPSMKDWRGGRGASQNIIPSSTGAAK 302 (425)
Q Consensus 226 ~~~~~~~IISnaSCTTn~Lap~lk~L~d~fGI~--~~~~TTvhAvt~~q~-~vDg~~~kd~r~gr~aa~NIIP~~tGaak 302 (425)
.++. .+||+||||||||++|+|+||+++|+|+ ++.|||+|++||+|+ .+|+++ .++ +..|++|+.+|.++
T Consensus 151 ~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~~-----~~~ni~py~~~~h~ 223 (359)
T 1xyg_A 151 DIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANL-YSE-----IAEGISSYGVTRHR 223 (359)
T ss_dssp HHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGB-HHH-----HTTCCEECSCSCCT
T ss_pred Hhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhh-hHH-----HhcCeecccccccc
Confidence 9875 6899999999999999999999999999 999999999999997 477665 233 56899999988643
Q ss_pred H---H----HhhcCCCCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcC-CCCccccccCCceEeecCC
Q 014424 303 A---V----GKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEG-SLKGILGYTDEDVVSNDFV 374 (425)
Q Consensus 303 a---v----~kVLPeL~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~-~lkgil~yte~~~VS~Df~ 374 (425)
. + ++++.+ +.+++++|+|||+++||+++++++++++++.|||+++|++++++ ++--++...+-|-.- +..
T Consensus 224 h~pEi~~~l~~~~~~-~~~v~~t~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~y~~~~~V~v~~~~~~p~~~-~v~ 301 (359)
T 1xyg_A 224 HVPEIEQGLSDVAQS-KVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRTH-NVR 301 (359)
T ss_dssp HHHHHHHHHHHHHTS-CCCCEEECEEESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCSSEEECCTTCCCBGG-GTT
T ss_pred cHHHHHHHHHHhcCC-CCCEEEEEEEecccceEEEEEEEEeCCCCCHHHHHHHHHHhhCCCCCEEEcCCCCCCCHH-Hhc
Confidence 2 2 344332 34799999999999999999999999999999999999998864 443333321122211 444
Q ss_pred CCCcceEeeCCCcccccCCeEEEEEEeCCC-cchhhhHHHHHHHHHH
Q 014424 375 GDSRSSIFDAKAGIGLSASFMKLVSWYDNE-WGYSNRVLDLIEHMAL 420 (425)
Q Consensus 375 ~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE-~gys~r~vdl~~~~~~ 420 (425)
|..+-.|- ..... .++.+.+++|.||- +|.|-+-|-.|+.|..
T Consensus 302 g~n~~~ig-~~~d~--~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~g 345 (359)
T 1xyg_A 302 GSNYCHMS-VFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIMLG 345 (359)
T ss_dssp TSSCEEEE-EEECS--STTEEEEEEEECTTTTTTHHHHHHHHHHHTT
T ss_pred CCCeEEEE-EEEeC--CCCEEEEEEEehhhhHhHHHHHHHHHHHHhC
Confidence 54444332 11111 23568899999999 8999999999888864
No 32
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.5e-43 Score=353.72 Aligned_cols=239 Identities=20% Similarity=0.200 Sum_probs=196.5
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+| ||+||++++|+|.++|+++|++|++. ... ....|++.|+.+. ++.+.++++.+.+ ++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s---~~~--~g~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~ 70 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSAS---PSK--IGKKYKDAVKWIE-------QGDIPEEVQDLPI-VST 70 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECC---GGG--TTSBHHHHCCCCS-------SSSCCHHHHTCBE-ECS
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecC---hhh--cCCCHHHhcCccc-------ccccccCCceeEE-eeC
Confidence 58999999 99999999999999999999999842 110 1123677787653 1122233333334 333
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-----CCCcEEeecCccccCC----------CCc
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKP----------NMN 232 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-----Dvp~vV~gVN~~~~~~----------~~~ 232 (425)
+++. | .++|+||+|||.+.+.+.++.|+++|++ ||+++++ |+|++|||||++.|.. ..+
T Consensus 71 d~~~--~--~~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~~ 144 (350)
T 2ep5_A 71 NYED--H--KDVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKGI 144 (350)
T ss_dssp SGGG--G--TTCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSSE
T ss_pred CHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCce
Confidence 4443 5 3899999999999999999999999995 7777764 6899999999998873 236
Q ss_pred EEecCCchhhhHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCCh-hHHH---Hhhc
Q 014424 233 IVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-AKAV---GKVL 308 (425)
Q Consensus 233 IISnaSCTTn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGa-akav---~kVL 308 (425)
||+||||||||++|+|+||+++|||+++.|||+|++||+|+. +.+ .+.+++|++|+++|+ +|.+ +|+|
T Consensus 145 iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~~------~~~~~~ni~py~~~~e~k~~~E~~~~l 216 (350)
T 2ep5_A 145 LVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GIS------FMAIEGNIIPYIKGEEDKIAKELTKLN 216 (350)
T ss_dssp EEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SSB------HHHHTTCCBCCCTTHHHHHHHHHHHHT
T ss_pred EEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CCC------ChHHhCCEEeccCCcchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999876 322 356899999999996 6554 7999
Q ss_pred CCCCC--------ceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhc
Q 014424 309 PDLNG--------KLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASE 354 (425)
Q Consensus 309 PeL~g--------kit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~ 354 (425)
|+|+| +++++|+|||+++||++++++++++++++|||+++|+++++
T Consensus 217 ~~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~~~ 270 (350)
T 2ep5_A 217 GKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLKNFKS 270 (350)
T ss_dssp CEECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSCCCHHHHHHHHHTCCC
T ss_pred hhccccccccccccEEEEeEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhc
Confidence 99876 79999999999999999999999999999999999999884
No 33
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.9e-42 Score=346.34 Aligned_cols=249 Identities=21% Similarity=0.241 Sum_probs=197.2
Q ss_pred CCceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC-CCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEE
Q 014424 87 DGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND-PFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (425)
Q Consensus 87 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd-~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~ 164 (425)
+|++||||+| ||+||+.++|+|.++|+++|++|++ ..... -.|++.|+.+... .+..+++.+.+
T Consensus 6 ~M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g------~~~~~~~~~~~~~-------~~~~~~~~~~~- 71 (354)
T 1ys4_A 6 KMKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAG------KKYKDACYWFQDR-------DIPENIKDMVV- 71 (354)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTT------SBHHHHSCCCCSS-------CCCHHHHTCBC-
T ss_pred cccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccccccc------ccHHHhccccccc-------ccccCceeeEE-
Confidence 4668999999 9999999999999999999999984 21111 1246777765210 01111122223
Q ss_pred ecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-----CCCcEEeecCccccCC----------
Q 014424 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKP---------- 229 (425)
Q Consensus 165 ~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-----Dvp~vV~gVN~~~~~~---------- 229 (425)
.+.++++ |.+.++|+||+|+|.+.+.+.++.++++|++ |||++++ |.|++|||+|++.|+.
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~ 147 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGW 147 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCC
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhccc
Confidence 2235544 6434899999999999999999999999984 8888874 4899999999998873
Q ss_pred CCcEEecCCchhhhHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCCh-h---HHHH
Q 014424 230 NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-A---KAVG 305 (425)
Q Consensus 230 ~~~IISnaSCTTn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGa-a---kav~ 305 (425)
..+||+||||+|||++|+|+||+++|||+++.|||+|++||+|+. +.+ .+.+++|++|+++|+ + .++.
T Consensus 148 ~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~~------~~~~~~ni~py~~~~~~k~~~Ei~ 219 (354)
T 1ys4_A 148 DGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GVP------SMAILDNLIPFIKNEEEKMQTESL 219 (354)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TSC------HHHHTTCCBSCCTTHHHHHHHHHH
T ss_pred CCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--ccc------chHHhCCEEeccCchhhHHHHHHH
Confidence 235999999999999999999999999999999999999999876 222 245789999999995 4 4567
Q ss_pred hhcCCCCC--------ceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccc
Q 014424 306 KVLPDLNG--------KLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGIL 361 (425)
Q Consensus 306 kVLPeL~g--------kit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil 361 (425)
++|+++.| +++++++|||+++||+++++++++++++.|||+++|+++++.+..++.
T Consensus 220 ~~l~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~~~~~~~~~~ 283 (354)
T 1ys4_A 220 KLLGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMDKFDPLKDLNLP 283 (354)
T ss_dssp HHTSEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHCCTTTTSCCT
T ss_pred HHHhccccccccCCCceEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhcccccccc
Confidence 78887655 799999999999999999999999999999999999999853333443
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=3.2e-39 Score=325.30 Aligned_cols=293 Identities=16% Similarity=0.066 Sum_probs=213.6
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+| ||+||++++|+|.++|++++++|++. .+. -.+|++.|++|.+.. .+ .+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~-~~~-----g~~~~~~~~~~~g~~------~~-------~~~--- 61 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR-RFA-----GEPVHFVHPNLRGRT------NL-------KFV--- 61 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS-TTT-----TSBGGGTCGGGTTTC------CC-------BCB---
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc-hhh-----CchhHHhCchhcCcc------cc-------ccc---
Confidence 57999999 99999999999999999999999984 222 256788998876421 11 111
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-CC-----------------CcEEeec---Cccc
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DA-----------------PMFVVGV---NEKT 226 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-Dv-----------------p~vV~gV---N~~~ 226 (425)
+.+ +| .++|+||+|+|.+.+.+.++.|+++|++.|.+|++.. +. +.+|||+ |++.
T Consensus 62 ~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~~ 137 (345)
T 2ozp_A 62 PPE--KL--EPADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYREA 137 (345)
T ss_dssp CGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHHH
T ss_pred chh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHHH
Confidence 222 36 3899999999999999999999999997555555442 21 3566666 9998
Q ss_pred cCCCCcEEecCCchhhhHHhHHHHHHhhcCee--EEEEEeeeecccccc-cccCCCCCcccCcccCcceeecCCCChhH-
Q 014424 227 YKPNMNIVSNASCTTNCLAPLAKVVHEEFGIL--EGLMTTVHATTATQK-TVDGPSMKDWRGGRGASQNIIPSSTGAAK- 302 (425)
Q Consensus 227 ~~~~~~IISnaSCTTn~Lap~lk~L~d~fGI~--~~~~TTvhAvt~~q~-~vDg~~~kd~r~gr~aa~NIIP~~tGaak- 302 (425)
++. .+||+||||+|||++|+|+||+++|+|+ ++.|||+|++||+|+ .+|+++ .++ +..|++|+.+|+++
T Consensus 138 i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~~-----~~~n~~py~~~~h~~ 210 (345)
T 2ozp_A 138 LKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASH-HPE-----RAGSIRVYKPTGHRH 210 (345)
T ss_dssp HHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGC-HHH-----HTTCCEEEECSCCTH
T ss_pred hhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCcccccccc-chh-----hccccccCCCCCccC
Confidence 875 6899999999999999999999999999 999999999999985 477665 233 56899999988643
Q ss_pred --HHHhhcCCCCC-ceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcC-CCCccccc--cC--CceEeecCC
Q 014424 303 --AVGKVLPDLNG-KLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEG-SLKGILGY--TD--EDVVSNDFV 374 (425)
Q Consensus 303 --av~kVLPeL~g-kit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~-~lkgil~y--te--~~~VS~Df~ 374 (425)
++.+.+. .+ +++++|+|||+++||+++++++++++++.|||+++|++++++ ++--++.= .+ -|-.- +-.
T Consensus 211 ~pei~~~l~--~~~~v~~~~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~y~~~~~v~v~~~~~~~~~~p~~~-~~~ 287 (345)
T 2ozp_A 211 TAEVVENLP--GRPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAGEPFIRLVKQKKGVHRYPDPR-FVQ 287 (345)
T ss_dssp HHHHHHTSS--SCCCEEEEEEECSCSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECCCSSSSCCSCCHH-HHT
T ss_pred hHhHHHHhC--CCCCeEEEEEEeccccEEEEEEEEEeCCCCCHHHHHHHHHHHhCCCCCEEEEeCCCCcCCCCCHH-Hhc
Confidence 4444444 14 899999999999999999999999999999999999998864 32222200 00 11111 222
Q ss_pred CCCcceEeeCCCcccccCCeEEEEEEeCCC-cchhhhHHHHHHHHHH
Q 014424 375 GDSRSSIFDAKAGIGLSASFMKLVSWYDNE-WGYSNRVLDLIEHMAL 420 (425)
Q Consensus 375 ~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE-~gys~r~vdl~~~~~~ 420 (425)
|..+-.|- .... ...+.+.+++=-||= +|=|-+-|-.|+.|..
T Consensus 288 g~~~~~ig-~~~d--~~~~~~~~~~~~DNl~kGAAg~Avq~~nl~~g 331 (345)
T 2ozp_A 288 GTNYADIG-FELE--EDTGRLVVMTAIDNLVKGTAGHALQALNVRMG 331 (345)
T ss_dssp TSCCEEEE-EEEE--TTTTEEEEEEEECTTTTTTHHHHHHHHHHHTT
T ss_pred CCceEEEE-EEEe--CCCCEEEEEEEeccHHHHHHHHHHHHHHHHhC
Confidence 22222221 0000 113456677778994 6777777766666643
No 35
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=9.5e-39 Score=323.65 Aligned_cols=306 Identities=16% Similarity=0.165 Sum_probs=217.5
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
|++||||+| +|++|++++|+|.+||+++|+.+......-+.+...+.+. .|..+... ++.+.+ ++
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~~~------------~~~~~v-~~ 71 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVPKE------------IADMEI-KP 71 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCCHH------------HHTCBC-EE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccccc------------cccceE-Ee
Confidence 358999999 9999999999999999999999865311111111110000 00001100 000112 12
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC---CCCCcEEeecCccccCC--C--------CcE
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYKP--N--------MNI 233 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps---~Dvp~vV~gVN~~~~~~--~--------~~I 233 (425)
.+++. | .++|+||+|+|.+.+++.++.|+++|++.|++|++. +|+|++|||||++.++. . .+|
T Consensus 72 ~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23333 3 389999999999999999999999999888888886 35899999999999853 1 259
Q ss_pred EecCCchhhhHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCCh-hH---HHHhhcC
Q 014424 234 VSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-AK---AVGKVLP 309 (425)
Q Consensus 234 ISnaSCTTn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGa-ak---av~kVLP 309 (425)
|+||||+|||++++|+||+++|||+++.|||+|++||+|+. +.+ .+.+++|++|+++|+ +| |++|+|+
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB------GGGTTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999875 222 246889999999886 44 5889999
Q ss_pred CCCC----------ceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCC-CCccccccCCceEeecCC----
Q 014424 310 DLNG----------KLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGS-LKGILGYTDEDVVSNDFV---- 374 (425)
Q Consensus 310 eL~g----------kit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~-lkgil~yte~~~VS~Df~---- 374 (425)
+++| +++++|+|||+++||+++++++++++++.|||+++|+++++.+ ..+++..++..+.-.|-.
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~~~~~P~ 299 (359)
T 4dpk_A 220 EVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMNEDTRPQ 299 (359)
T ss_dssp TSCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEECCSTTCCC
T ss_pred hcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCCccEEEcCCCCCCC
Confidence 8876 7999999999999999999999999999999999999998651 222222222211111110
Q ss_pred ------CCC---cceEeeCCCcccccCCeEEEEEEeCCC-cchhhhHHHHHHHHHHh
Q 014424 375 ------GDS---RSSIFDAKAGIGLSASFMKLVSWYDNE-WGYSNRVLDLIEHMALV 421 (425)
Q Consensus 375 ------~~~---~s~i~d~~~~~~~~~~~vKl~~WyDNE-~gys~r~vdl~~~~~~~ 421 (425)
.+. ..+.+ .... ..+++.+.+++=-||= +|=|-.-+-.++.|..+
T Consensus 300 ~~~~~g~~~~~~~~~~V-gr~r-~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpk_A 300 VYFDRWAGDIPGMSVVV-GRLK-QVNKRMIRLVSLIHNTVRGAAGGGILAAELLVEK 354 (359)
T ss_dssp HHHHTTCTTTTTCSEEE-EEEE-EEETTEEEEEEEECTTTTTTHHHHHHHHHHHHHT
T ss_pred HHHhhccCCCcCCeEEE-EEEE-EcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHHc
Confidence 000 11110 0000 0234567788889994 67777777777777553
No 36
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=9.5e-39 Score=323.65 Aligned_cols=306 Identities=16% Similarity=0.165 Sum_probs=217.7
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
|++||||+| +|++|++++|+|.+||+++|+.+......-+.+...+.+. .|..+... ++.+.+ ++
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~~~------------~~~~~v-~~ 71 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVPKE------------IADMEI-KP 71 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCCHH------------HHTCBC-EE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccccc------------cccceE-Ee
Confidence 358999999 9999999999999999999999865311111111110000 00001100 000112 12
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC---CCCCcEEeecCccccCC--C--------CcE
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYKP--N--------MNI 233 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps---~Dvp~vV~gVN~~~~~~--~--------~~I 233 (425)
.+++. | .++|+||+|+|.+.+++.++.|+++|++.|++|++. +|+|++|||||++.++. . .+|
T Consensus 72 ~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23333 3 389999999999999999999999999888888886 35899999999999853 1 259
Q ss_pred EecCCchhhhHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCCh-hH---HHHhhcC
Q 014424 234 VSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-AK---AVGKVLP 309 (425)
Q Consensus 234 ISnaSCTTn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGa-ak---av~kVLP 309 (425)
|+||||+|||++++|+||+++|||+++.|||+|++||+|+. +.+ .+.+++|++|+++|+ +| |++|+|+
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEECCHHHHHHHHHHHHHHHT
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999865 222 245789999999886 44 5889999
Q ss_pred CCCC----------ceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCC-CCccccccCCceEeecCC----
Q 014424 310 DLNG----------KLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGS-LKGILGYTDEDVVSNDFV---- 374 (425)
Q Consensus 310 eL~g----------kit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~-lkgil~yte~~~VS~Df~---- 374 (425)
+++| +++++|+|||+++||+++++++++++++.|||+++|+++++.+ ..+++..++..+.-.|-.
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~~~~~P~ 299 (359)
T 4dpl_A 220 EVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMNEDTRPQ 299 (359)
T ss_dssp TSCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEEECSTTCCC
T ss_pred hcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCCccEEEcCCCCCCC
Confidence 8876 7999999999999999999999999999999999999998651 222322222211111110
Q ss_pred ------CCC---cceEeeCCCcccccCCeEEEEEEeCCC-cchhhhHHHHHHHHHHh
Q 014424 375 ------GDS---RSSIFDAKAGIGLSASFMKLVSWYDNE-WGYSNRVLDLIEHMALV 421 (425)
Q Consensus 375 ------~~~---~s~i~d~~~~~~~~~~~vKl~~WyDNE-~gys~r~vdl~~~~~~~ 421 (425)
.+. ..+.+ .... ..+++.+.+++=-||= +|=|-.-+-.++.|..+
T Consensus 300 ~~~~~g~~~~~~~~~~V-gr~r-~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpl_A 300 VYFDRWAGDIPGMSVVV-GRLK-QVNKRMIRLVSLIHNTVRGAAGGGILAAELLVEK 354 (359)
T ss_dssp HHHHTTCTTTTTCSEEE-EEEE-EEETTEEEEEEEECTTTTTTHHHHHHHHHHHHHT
T ss_pred HHHhhccCCCcCCeEEE-EEEE-EcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHHc
Confidence 000 11110 0000 0234567788889994 67777777777777553
No 37
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=7.3e-37 Score=310.51 Aligned_cols=298 Identities=16% Similarity=0.154 Sum_probs=214.6
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcC--CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEE
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~--~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~ 164 (425)
|++||||+| +|++|++++|+|.+| |.++++.+... .+ .|+.+.+.|+.+.+.
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-------------~s------------aG~~~~~~~~~~~~~ 55 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-------------RS------------AGKSLKFKDQDITIE 55 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-------------TT------------TTCEEEETTEEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-------------cc------------CCCcceecCCCceEe
Confidence 678999999 999999999999998 66777666542 01 134555677766664
Q ss_pred ecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC---CCCCcEEeecCccccCCCCcEEecCCchh
Q 014424 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYKPNMNIVSNASCTT 241 (425)
Q Consensus 165 ~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps---~Dvp~vV~gVN~~~~~~~~~IISnaSCTT 241 (425)
+.+++. | .++|+||+|+|.+.+++.++.++++|++.|.+|++. +|+|++|||||++.++...+||+||||||
T Consensus 56 -~~~~~~--~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC~t 130 (366)
T 3pwk_A 56 -ETTETA--F--EGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCST 130 (366)
T ss_dssp -ECCTTT--T--TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCHHH
T ss_pred -eCCHHH--h--cCCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCcHH
Confidence 334443 4 389999999999999999999999999766666665 35899999999999986578999999999
Q ss_pred hhHHhHHHHHHhhcCeeEEEEEeeeecccccc-ccc-----------C------CCCCcc-----cCcccCcceeecCC-
Q 014424 242 NCLAPLAKVVHEEFGILEGLMTTVHATTATQK-TVD-----------G------PSMKDW-----RGGRGASQNIIPSS- 297 (425)
Q Consensus 242 n~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~-~vD-----------g------~~~kd~-----r~gr~aa~NIIP~~- 297 (425)
||++|+|+||+++|||+++.|||+|++||+++ .++ + ...+.+ ++-+.+++|++|.+
T Consensus 131 t~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~ 210 (366)
T 3pwk_A 131 IQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQID 210 (366)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSS
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccceec
Confidence 99999999999999999999999999999853 221 1 000111 12278999999997
Q ss_pred ----CChhHHHH-------hhcCCCCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCccccccC-
Q 014424 298 ----TGAAKAVG-------KVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTD- 365 (425)
Q Consensus 298 ----tGaakav~-------kVLPeL~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yte- 365 (425)
+|.++++. |++.....+++.+|+|||+++||+++++++++++++.+|++++|++++. --++...+
T Consensus 211 ~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~~s~eei~~~l~~~~~---V~v~~~~~~ 287 (366)
T 3pwk_A 211 VFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAFPG---AVLEDDVAH 287 (366)
T ss_dssp CBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHSTT---EEECCBGGG
T ss_pred ccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCCCCHHHHHHHHHhCCC---cEEecCccc
Confidence 46666554 5666666789999999999999999999999999999999999999741 11111100
Q ss_pred --CceEeecCCCCCcceEeeCCCcccccCCeEEEEEEeCCC-cchhhhHHHHHHHHHH
Q 014424 366 --EDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNE-WGYSNRVLDLIEHMAL 420 (425)
Q Consensus 366 --~~~VS~Df~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE-~gys~r~vdl~~~~~~ 420 (425)
-|-. .+..|.-+..|-=..... ..++.+.+++=-||= +|=|-+-|-.|+.|..
T Consensus 288 ~~~P~~-~~v~gtn~~~Vgr~r~d~-~~~~~l~~~~~~DNL~KGAAg~AVQn~nlm~~ 343 (366)
T 3pwk_A 288 QIYPQA-INAVGSRDTFVGRIRKDL-DAEKGIHMWVVSDNLLKGAAWNSVQIAETLHE 343 (366)
T ss_dssp TBCCCH-HHHTTCSSEEEEEEEECS-SCTTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred CCCCch-hHcCCCCEEEEEEEEecC-CCCCEEEEEEEEccHHHhHHHHHHHHHHHHHH
Confidence 0111 122333222221000000 123556677778994 6777777777777654
No 38
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=5.3e-38 Score=320.39 Aligned_cols=244 Identities=21% Similarity=0.237 Sum_probs=184.3
Q ss_pred CCceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC-C-CCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEE
Q 014424 87 DGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND-P-FIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKV 163 (425)
Q Consensus 87 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd-~-~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v 163 (425)
|+++||||+| +|++|++++|+|.+||+++|+.+.. . +... .+ ...| +|.. +..|..+++.+.+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk-~~------~~~~-~~~~------~~~~p~~~~~~~v 82 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGK-KY------KDAA-SWKQ------TETLPETEQDIVV 82 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTS-BH------HHHC-CCCC------SSCCCHHHHTCBC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCC-CH------HHhc-cccc------ccccccccccceE
Confidence 4578999999 9999999999999999999988742 1 1111 11 1111 0100 0000000011122
Q ss_pred EecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC---CCCCcEEeecCccccC------------
Q 014424 164 FSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYK------------ 228 (425)
Q Consensus 164 ~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps---~Dvp~vV~gVN~~~~~------------ 228 (425)
++.++++ .| .++|+||+|+|.+.+++.++.++++|++.|.+|++. +|+|++|++||++.|.
T Consensus 83 -~~~~~~~-~~--~~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~~ 158 (381)
T 3hsk_A 83 -QECKPEG-NF--LECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVSK 158 (381)
T ss_dssp -EESSSCT-TG--GGCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHHT
T ss_pred -EeCchhh-hc--ccCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhccc
Confidence 2223331 34 389999999999999999999999999777677665 3589999999999885
Q ss_pred ---CCCcEEecCCchhhhHHhHHHHHHhhcC-eeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCCh-h--
Q 014424 229 ---PNMNIVSNASCTTNCLAPLAKVVHEEFG-ILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-A-- 301 (425)
Q Consensus 229 ---~~~~IISnaSCTTn~Lap~lk~L~d~fG-I~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGa-a-- 301 (425)
...+||+||||+|+|++++|+||+++|| |+++.|+|+|++||+++.. +.+ .+.+++|++|+++|. .
T Consensus 159 ~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~----~~~---~~~~~~N~~Py~~~~e~k~ 231 (381)
T 3hsk_A 159 GGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSP----GVS---GMDILDNIVPYISGEEDKL 231 (381)
T ss_dssp TCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC----------CC---HHHHTTCCBCCCTTHHHHH
T ss_pred ccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccC----Ccc---hhhhhcChhhcccchHHHH
Confidence 2356999999999999999999999999 9999999999999997521 011 236889999999987 3
Q ss_pred -HHHHhhcCCCCC-------------ceeEEEEEeeeccceeeeEEEEecC--CCCHHHHHHHHHHhhcC
Q 014424 302 -KAVGKVLPDLNG-------------KLTGMAFRVPTPNVSVVDLTCRLAK--GASYEDVKAAIKYASEG 355 (425)
Q Consensus 302 -kav~kVLPeL~g-------------kit~~avRVPv~~gs~~dltv~lek--~~s~eeI~~alk~a~~~ 355 (425)
.|++|+|+.+.+ +++++|+|||+++||++++++++++ +++.|||+++|++++++
T Consensus 232 ~~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~~t~eei~~~l~~~y~~ 301 (381)
T 3hsk_A 232 EWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLREYECA 301 (381)
T ss_dssp HHHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSCCCHHHHHHHHHHCBCH
T ss_pred HHHHHHHhhhcccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCCCCHHHHHHHHHHhhcc
Confidence 557899987765 7999999999999999999999999 99999999999999854
No 39
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=5.3e-38 Score=319.88 Aligned_cols=290 Identities=16% Similarity=0.179 Sum_probs=206.2
Q ss_pred eeEEEEc-cChHHHHHHH-HHHcCC--CceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 90 TKVGING-FGRIGRLVLR-VAAFRD--DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr-~l~~~~--~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
+||||+| +|++|++++| +|++|| .++++.+.... ..+++.. +.|+.+.+..
T Consensus 5 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~--------------aG~~~~~-----------~~~~~~~v~~ 59 (377)
T 3uw3_A 5 MNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN--------------AGGKAPS-----------FAKNETTLKD 59 (377)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC--------------TTSBCCT-----------TCCSCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh--------------cCCCHHH-----------cCCCceEEEe
Confidence 5999999 9999999999 999997 46766664421 0111100 2222222322
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-----CCCcEEeecCccccCCC--C--cEEec
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKPN--M--NIVSN 236 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-----Dvp~vV~gVN~~~~~~~--~--~IISn 236 (425)
..+++. | .++|+||+|+|.+.+++.++.|+++|+|++|||++++ |+|++|||||++.++.. + ++|+|
T Consensus 60 ~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 135 (377)
T 3uw3_A 60 ATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFIG 135 (377)
T ss_dssp TTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEEc
Confidence 112222 3 3899999999999999999999999999899999983 57999999999988642 3 45999
Q ss_pred CCchhhhHHhHHHHHHhhcCeeEEEEEeeeecccccc-cc-----------cC-------C------------------C
Q 014424 237 ASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQK-TV-----------DG-------P------------------S 279 (425)
Q Consensus 237 aSCTTn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~-~v-----------Dg-------~------------------~ 279 (425)
|||||||++|+|+||+++|||+++.|||+|++||+.+ .+ ++ + .
T Consensus 136 p~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~~~ 215 (377)
T 3uw3_A 136 GNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNGDA 215 (377)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHSTT
T ss_pred CCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999753 11 11 1 0
Q ss_pred CCcccCcccCcceeecCCC-----ChhHH-------HHhhcCCC------CCceeEEEEEeeeccceeeeEEEEecCCCC
Q 014424 280 MKDWRGGRGASQNIIPSST-----GAAKA-------VGKVLPDL------NGKLTGMAFRVPTPNVSVVDLTCRLAKGAS 341 (425)
Q Consensus 280 ~kd~r~gr~aa~NIIP~~t-----Gaaka-------v~kVLPeL------~gkit~~avRVPv~~gs~~dltv~lek~~s 341 (425)
...-.+++++++|++|++. |.+++ ++|++..+ ..+++++|+||||++||+..++++++++++
T Consensus 216 ~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~~~ 295 (377)
T 3uw3_A 216 MPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKDVP 295 (377)
T ss_dssp SCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSCCC
T ss_pred cccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCCCC
Confidence 0112456789999999974 44444 67788764 567999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcccc--------ccCCceEeecCCCCCcceE----eeCCCcccccCCeEEEEEEeCC-Ccchh
Q 014424 342 YEDVKAAIKYASEGSLKGILG--------YTDEDVVSNDFVGDSRSSI----FDAKAGIGLSASFMKLVSWYDN-EWGYS 408 (425)
Q Consensus 342 ~eeI~~alk~a~~~~lkgil~--------yte~~~VS~Df~~~~~s~i----~d~~~~~~~~~~~vKl~~WyDN-E~gys 408 (425)
.+|++++|+++. ++--++. |. .|. +..|.-+..| .|. .+++.+.+++=-|| -||=|
T Consensus 296 ~eei~~~l~~~~--p~V~v~~~~~~~~~~~P-~p~---~v~G~n~v~VGrir~d~-----~~~~~l~~~~v~DNL~KGAA 364 (377)
T 3uw3_A 296 LDEINGILASAN--DWVKVVPNEREASMRDL-SPA---KVTGTLSVPVGRLRKLA-----MGGEYLSAFTVGDQLLWGAA 364 (377)
T ss_dssp HHHHHHHHHTSC--SSEEECCSSHHHHHHHS-SHH---HHTTSSCEEEEEEEECT-----TCTTEEEEEEEEETTCCCCC
T ss_pred HHHHHHHHHhCC--CCEEEecCCcccccCCC-CHH---HhcCCCcEEEEEEEECC-----CCCCEEEEEEEehhhhHhHH
Confidence 999999999872 2211211 11 111 2233222211 011 12355666666888 57877
Q ss_pred hhHHHHHHHHH
Q 014424 409 NRVLDLIEHMA 419 (425)
Q Consensus 409 ~r~vdl~~~~~ 419 (425)
-+.+-.|..|-
T Consensus 365 gqAvqn~nl~~ 375 (377)
T 3uw3_A 365 EPLRRMLRILL 375 (377)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 77777777664
No 40
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=1e-37 Score=317.08 Aligned_cols=293 Identities=16% Similarity=0.139 Sum_probs=206.2
Q ss_pred eeEEEEc-cChHHHHHHH-HHHcCC--CceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 90 TKVGING-FGRIGRLVLR-VAAFRD--DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr-~l~~~~--~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
|||||+| +|++|++++| +|.+|| .++++.+... +..+++. .+.|+.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~aG~~~~-----------~~~~~~~~~~~ 55 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS--------------QIGVPAP-----------NFGKDAGMLHD 55 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------STTSBCC-----------CSSSCCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc--------------ccCcCHH-----------HhCCCceEEEe
Confidence 4999999 9999999999 999998 4677666542 1111111 02222233332
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-----CCCcEEeecCccccCCC--C--cEEec
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKPN--M--NIVSN 236 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-----Dvp~vV~gVN~~~~~~~--~--~IISn 236 (425)
..+++. | .++|+||+|+|.+.+++.++.|+++|+|++|||++++ |+|++|||||++.++.. + ++|+|
T Consensus 56 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 131 (370)
T 3pzr_A 56 AFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVG 131 (370)
T ss_dssp TTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEc
Confidence 222222 3 3899999999999999999999999999999999983 57999999999998642 3 46999
Q ss_pred CCchhhhHHhHHHHHHhhcCeeEEEEEeeeeccccccc-cc------------------------------------CCC
Q 014424 237 ASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKT-VD------------------------------------GPS 279 (425)
Q Consensus 237 aSCTTn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~-vD------------------------------------g~~ 279 (425)
|||||||++|+|+||+++|||+++.|||+|++||+.+- ++ +..
T Consensus 132 p~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~~ 211 (370)
T 3pzr_A 132 GNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSGS 211 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSTT
T ss_pred CChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999997531 10 100
Q ss_pred CCcccCcccCcceeecCCC-----ChhH-------HHHhhcCC--CCCceeEEEEEeeeccceeeeEEEEecCCCCHHHH
Q 014424 280 MKDWRGGRGASQNIIPSST-----GAAK-------AVGKVLPD--LNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDV 345 (425)
Q Consensus 280 ~kd~r~gr~aa~NIIP~~t-----Gaak-------av~kVLPe--L~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI 345 (425)
...-.+++++++|++|++. |+++ +++|++.. -..+++++|+|||+++||+..++++++++++.+|+
T Consensus 212 ~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~~~~~ei 291 (370)
T 3pzr_A 212 FPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDEI 291 (370)
T ss_dssp SCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSCCCHHHH
T ss_pred cccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHHH
Confidence 0112456779999999974 4443 35677764 24569999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcccc--------ccCCceEeecCCCCCcceEeeCCCccc--ccCCeEEEEEEeCC-CcchhhhHHHH
Q 014424 346 KAAIKYASEGSLKGILG--------YTDEDVVSNDFVGDSRSSIFDAKAGIG--LSASFMKLVSWYDN-EWGYSNRVLDL 414 (425)
Q Consensus 346 ~~alk~a~~~~lkgil~--------yte~~~VS~Df~~~~~s~i~d~~~~~~--~~~~~vKl~~WyDN-E~gys~r~vdl 414 (425)
+++|+++. |+--++. |+ .|. +..|.-+..| +.... .+++.+.+++=-|| -||=|-+.+-.
T Consensus 292 ~~~l~~~~--p~V~v~~~~~~~~~~~P-~p~---~v~G~n~v~V---Grir~d~~~~~~l~~~~v~DNL~KGAAgqAvQn 362 (370)
T 3pzr_A 292 EEMIATHN--DWVKVIPNERDITAREL-TPA---KVTGTLSVPV---GRLRKMAMGDDFLNAFTVGDQLLWGAAEPLRRT 362 (370)
T ss_dssp HHHHHTSC--SSEEECCSCHHHHHHHS-SHH---HHTTSCCEEE---EEEEEETTEEEEEEEEEEEETTTTTTHHHHHHH
T ss_pred HHHHHhCC--CCEEEecCCcccccCCC-CHH---HhcCCccEEE---EEEEECCCCCCEEEEEEEehhhhHhHHHHHHHH
Confidence 99999882 2211221 11 111 2233222211 00000 01233445555788 57888888888
Q ss_pred HHHHHH
Q 014424 415 IEHMAL 420 (425)
Q Consensus 415 ~~~~~~ 420 (425)
|..|..
T Consensus 363 ~Nl~~~ 368 (370)
T 3pzr_A 363 LRIILA 368 (370)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777754
No 41
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=7.7e-36 Score=300.80 Aligned_cols=293 Identities=20% Similarity=0.251 Sum_probs=209.4
Q ss_pred eeEEEEc-cChHHHHHHHHHHcC--CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 90 TKVGING-FGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~--~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
+||||+| +|++|++++|+|.+| |.++++.+... .+ + |+.+.+.|+.+.+. +
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-------------~~----------a--G~~~~~~~~~~~~~-~ 55 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-------------RS----------Q--GRKLAFRGQEIEVE-D 55 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------TT----------S--SCEEEETTEEEEEE-E
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-------------cc----------C--CCceeecCCceEEE-e
Confidence 6999999 999999999999998 66677666442 11 1 34556777777664 3
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC---CCCCcEEeecCc-cccCCC-CcEEecCCchh
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNE-KTYKPN-MNIVSNASCTT 241 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps---~Dvp~vV~gVN~-~~~~~~-~~IISnaSCTT 241 (425)
.+++ .| .++|+||+|+|.+.+++.++.|+++|++.|.+|++. +|+|++|||||+ +.++.. ++||+||||||
T Consensus 56 ~~~~--~~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~t 131 (344)
T 3tz6_A 56 AETA--DP--SGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTT 131 (344)
T ss_dssp TTTS--CC--TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHHH
T ss_pred CCHH--Hh--ccCCEEEECCChHHHHHHHHHHHhCCCEEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcHH
Confidence 3443 34 389999999999999999999999999555455543 458999999999 988754 68999999999
Q ss_pred hhHHhHHHHHHhhcCeeEEEEEeeeeccccccc--------------------ccCCCC---CcccCcccCcceeecCCC
Q 014424 242 NCLAPLAKVVHEEFGILEGLMTTVHATTATQKT--------------------VDGPSM---KDWRGGRGASQNIIPSST 298 (425)
Q Consensus 242 n~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~--------------------vDg~~~---kd~r~gr~aa~NIIP~~t 298 (425)
||++|+|+||+++|||+++.|||+|++||+.+- +++... +....+...++|++|++.
T Consensus 132 t~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i~ 211 (344)
T 3tz6_A 132 MAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAG 211 (344)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCCS
T ss_pred HHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999997531 233210 112456678999999852
Q ss_pred -----Ch--hHH-------HHhhcCCCCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcCCCCcccccc
Q 014424 299 -----GA--AKA-------VGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYT 364 (425)
Q Consensus 299 -----Ga--aka-------v~kVLPeL~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~~lkgil~yt 364 (425)
|. ++| .+|++..-..+++.+|+|||+++||++.++++++++++.+|++++|++++ .--++.|.
T Consensus 212 ~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~~s~eei~~~l~~~p---~V~v~~~P 288 (344)
T 3tz6_A 212 SLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGAT---GVQLVDVP 288 (344)
T ss_dssp CBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHHHHHHHHHCT---TEEECSSC
T ss_pred ccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCCCCHHHHHHHHhcCC---CeEEECCC
Confidence 43 344 34677433456999999999999999999999999999999999999653 22223332
Q ss_pred CCceEeecCCCCCcceEeeCCCcccc-cCCeEEEEEEeCC-CcchhhhHHHHHHHHH
Q 014424 365 DEDVVSNDFVGDSRSSIFDAKAGIGL-SASFMKLVSWYDN-EWGYSNRVLDLIEHMA 419 (425)
Q Consensus 365 e~~~VS~Df~~~~~s~i~d~~~~~~~-~~~~vKl~~WyDN-E~gys~r~vdl~~~~~ 419 (425)
. |. +..|.-+..|-=....... +++.+.+++=-|| -||=|-.-|-.|+.|.
T Consensus 289 ~-p~---~v~gtn~~~Vgrir~d~~~~~~~~l~~~~~~DNL~KGAAg~AVQ~anll~ 341 (344)
T 3tz6_A 289 T-PL---AAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLT 341 (344)
T ss_dssp C-HH---HHTTCSSEEEEEEEECTTSGGGCEEEEEEEECTTTTTTHHHHHHHHHHHT
T ss_pred C-hH---HhCCCceEEEEEEEecCCCCCCCEEEEEEEEcchhHhHHHHHHHHHHHHH
Confidence 1 11 2233322222100000000 1235677777899 4677766666666653
No 42
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=8.5e-36 Score=299.75 Aligned_cols=288 Identities=16% Similarity=0.146 Sum_probs=209.7
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCC---CChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPF---IDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~---~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
+||+|+| +|++|++++|+|.+||+++++++.... ...+.+ ...|..|.+.. .+.+.
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~------~~~~p~~~~~~-------------~~~v~- 64 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI------SDLHPQLKGIV-------------ELPLQ- 64 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH------HHHCGGGTTTC-------------CCBEE-
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch------HHhCccccCcc-------------ceeEe-
Confidence 6999999 999999999999999999999885421 001111 12232232210 11121
Q ss_pred cC-CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC--CC--CC---------------cEEeec---
Q 014424 166 KR-DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS--AD--AP---------------MFVVGV--- 222 (425)
Q Consensus 166 ~~-dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps--~D--vp---------------~vV~gV--- 222 (425)
+. ++++ |. .++|+||+|+|.+.+++.++.++++|+|.|.+|++. +| +| .+|||+
T Consensus 65 ~~~~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEv 141 (337)
T 3dr3_A 65 PMSDISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEW 141 (337)
T ss_dssp EESSGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTT
T ss_pred ccCCHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEcccc
Confidence 11 2333 31 379999999999999999999999999888888775 23 32 345555
Q ss_pred CccccCCCCcEEecCCchhhhHHhHHHHHHh--hcCeeEE-EEEeeeeccccc-ccccCCCCCcccCcccCcceeecCCC
Q 014424 223 NEKTYKPNMNIVSNASCTTNCLAPLAKVVHE--EFGILEG-LMTTVHATTATQ-KTVDGPSMKDWRGGRGASQNIIPSST 298 (425)
Q Consensus 223 N~~~~~~~~~IISnaSCTTn~Lap~lk~L~d--~fGI~~~-~~TTvhAvt~~q-~~vDg~~~kd~r~gr~aa~NIIP~~t 298 (425)
|++.+.. .+||+||||+|||++++|+||++ .|+++++ .|+|+|++||++ +.+|+.+ .+++ |++|+.+
T Consensus 142 n~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~-~~~~-------n~~py~~ 212 (337)
T 3dr3_A 142 CGNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS-FCEV-------SLQPYGV 212 (337)
T ss_dssp CCHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTS-GGGC-------SEEECST
T ss_pred CHHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccc-cccc-------ceEccCc
Confidence 9988874 68999999999999999999999 6999999 999999999986 6777666 3433 9999998
Q ss_pred ChhHHHHhhcCCCCC----ceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcC-CCCccccccCCceEeecC
Q 014424 299 GAAKAVGKVLPDLNG----KLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEG-SLKGILGYTDEDVVSNDF 373 (425)
Q Consensus 299 Gaakav~kVLPeL~g----kit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~-~lkgil~yte~~~VS~Df 373 (425)
+.++ .+||+.+ +++++++|||+++||+++++++++++++.|||+++|++++++ ++--++.-.+ |.. -+.
T Consensus 213 ~~h~----h~Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~~t~eev~~~l~~~Y~~~p~V~v~~~~~-P~~-~~v 286 (337)
T 3dr3_A 213 FTHR----HQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKGV-PAL-KNV 286 (337)
T ss_dssp TTCT----HHHHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECSSSC-CCG-GGT
T ss_pred ccce----echhHHhhhcCCEEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHHhCCCCCEEECCCCC-CCH-HHh
Confidence 8743 3344333 899999999999999999999999999999999999998754 4433332111 322 244
Q ss_pred CCCCcceEeeCCCcccccCCeEEEEEEeCC-CcchhhhHHHHHHHHHH
Q 014424 374 VGDSRSSIFDAKAGIGLSASFMKLVSWYDN-EWGYSNRVLDLIEHMAL 420 (425)
Q Consensus 374 ~~~~~s~i~d~~~~~~~~~~~vKl~~WyDN-E~gys~r~vdl~~~~~~ 420 (425)
.|..+--|- ...+++.+.+++..|| -+|=|-+-+-.|+.|-.
T Consensus 287 ~gtn~~~ig-----~~~~~~~l~~~~~~DNL~KGAAgqAVQ~~nlm~g 329 (337)
T 3dr3_A 287 VGLPFCDIG-----FAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFG 329 (337)
T ss_dssp TTSSCEEEE-----EEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHT
T ss_pred CCCCcEEEE-----EEEeCCEEEEEEEechHHHHHHHHHHHHHHHHhC
Confidence 444433321 1111456788888999 67888888888888754
No 43
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=8.3e-35 Score=294.11 Aligned_cols=297 Identities=14% Similarity=0.062 Sum_probs=215.7
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCC-----CceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEE
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRD-----DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIK 162 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~-----~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~ 162 (425)
|+||+|+| +|+||++++|.|.+|+ ++++++++... +.. -.+++.|++|.+..+ + .
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-~ag-----k~~~~~~~~l~~~~~------~-------~ 69 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-SAG-----STLGEHHPHLTPLAH------R-------V 69 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-CTT-----SBGGGTCTTCGGGTT------C-------B
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-cCC-----Cchhhhcccccccce------e-------e
Confidence 57999999 9999999999999999 89999997531 111 125677777764211 1 1
Q ss_pred EEecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC--C-C--------------CcEEeec--C
Q 014424 163 VFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA--D-A--------------PMFVVGV--N 223 (425)
Q Consensus 163 v~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~--D-v--------------p~vV~gV--N 223 (425)
+. +.+++. |. ++|+||+|+|.+.+++.++.+ ++|++.|++|++.. | . |..|||+ |
T Consensus 70 ~~-~~~~~~--~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n 143 (352)
T 2nqt_A 70 VE-PTEAAV--LG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGA 143 (352)
T ss_dssp CE-ECCHHH--HT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTH
T ss_pred ec-cCCHHH--hc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccC
Confidence 11 112222 53 899999999999999999999 99998777888763 3 2 7788888 9
Q ss_pred ccccCCCCcEEecCCchhhhHHhHHHHHHhhcCee-EEEEEeeeecccc-cccccCCCCCcccCcccCcceeecCCCChh
Q 014424 224 EKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGIL-EGLMTTVHATTAT-QKTVDGPSMKDWRGGRGASQNIIPSSTGAA 301 (425)
Q Consensus 224 ~~~~~~~~~IISnaSCTTn~Lap~lk~L~d~fGI~-~~~~TTvhAvt~~-q~~vDg~~~kd~r~gr~aa~NIIP~~tGaa 301 (425)
++.++ ..+||+||||+|||++++|+||+++++|+ ++.|+|+|++||+ ++.+|+.+ .++++++..++|++|++ -..
T Consensus 144 ~~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~-~~~~~~~~~ay~~~~~h-~h~ 220 (352)
T 2nqt_A 144 RDQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLL-GAEVIGSARAYNIAGVH-RHT 220 (352)
T ss_dssp HHHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGS-HHHHTTCCEECSTTTTS-TTH
T ss_pred HHHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccccc-HHHHhhhcccccCCCcc-eec
Confidence 99987 46899999999999999999999999999 9999999999998 77777766 46777777788888832 123
Q ss_pred HH----HHhhcCCCCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcC-CCCccccccCCceEeecCCCC
Q 014424 302 KA----VGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEG-SLKGILGYTDEDVVSNDFVGD 376 (425)
Q Consensus 302 ka----v~kVLPeL~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~-~lkgil~yte~~~VS~Df~~~ 376 (425)
++ ++|++. .+.+++++|+|||+++||+++++++++++ .|||+++|++++++ ++--++.-.+-|-. .+..|.
T Consensus 221 pEi~~e~~ki~~-~~~~v~ft~~rvP~~rG~~~ti~~~l~~~--~~ei~~~~~~~y~~~~~V~v~~~~~~p~~-~~v~g~ 296 (352)
T 2nqt_A 221 PEIAQGLRAVTD-RDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYEKAYHAEPFIYLMPEGQLPRT-GAVIGS 296 (352)
T ss_dssp HHHHHHHHTTCS-SCCEEEEEEEECSCSSCEEEEEEEECCSC--HHHHHHHHHHHHTTCTTEEECCTTCCCCG-GGTTTS
T ss_pred HHHHHHHHHHhC-CCCCEEEEEEEEccccEEEEEEEEEECCC--HHHHHHHHHHhhCCCCCEEEeCCCCCcCh-HHhcCC
Confidence 33 466665 36789999999999999999999999988 99999999998754 33323221111111 133443
Q ss_pred CcceEeeCCCcccccCCeEEEEEEeCCC-cchhhhHHHHHHHHHH
Q 014424 377 SRSSIFDAKAGIGLSASFMKLVSWYDNE-WGYSNRVLDLIEHMAL 420 (425)
Q Consensus 377 ~~s~i~d~~~~~~~~~~~vKl~~WyDNE-~gys~r~vdl~~~~~~ 420 (425)
.+-.|- .. .--.++.+.+++=-||= +|=|-+-|-.|+.|..
T Consensus 297 n~~~ig-~~--~d~~~~~l~~~~~~DNL~KGAAg~AVQ~~nl~~g 338 (352)
T 2nqt_A 297 NAAHIA-VA--VDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALG 338 (352)
T ss_dssp SCEEEE-EE--EETTTTEEEEEEEECTTTTTTHHHHHHHHHHHHT
T ss_pred cEEEEE-EE--EeCCCCEEEEEEEEcchhHhHHHHHHHHHHHHhC
Confidence 333321 00 00123456677778994 6777776766666643
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.96 E-value=2.7e-30 Score=260.96 Aligned_cols=289 Identities=13% Similarity=0.076 Sum_probs=199.2
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
|+||||+| +|++|++++|+|.+||+++|+.+.... +. -.+|++.|+.|.. + + .+ ++.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~-~a-----G~~~~~~~p~~~~------~--l-------~~-~~~ 70 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT-YA-----GKKLEEIFPSTLE------N--S-------IL-SEF 70 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST-TT-----TSBHHHHCGGGCC------C--C-------BC-BCC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc-cc-----cCChHHhChhhcc------C--c-------eE-EeC
Confidence 48999999 999999999999999999999997631 11 1234555655541 1 1 12 122
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC----C-C------------------CcEEeecCc
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA----D-A------------------PMFVVGVNE 224 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~----D-v------------------p~vV~gVN~ 224 (425)
+++++ | .++|+||+|+|...+++.++.+ +|+ +||+++++ | . |..+||+|.
T Consensus 71 ~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~ 143 (351)
T 1vkn_A 71 DPEKV-S--KNCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHR 143 (351)
T ss_dssp CHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHH
T ss_pred CHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCH
Confidence 33332 2 3799999999999999999877 677 67877763 2 1 566777798
Q ss_pred cccCCCCcEEecCCchhhhHHhHHHHHHhhcCee--EEEEEeeeecccccc-cccCCCCCcccCcccCcceeecCCCChh
Q 014424 225 KTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGIL--EGLMTTVHATTATQK-TVDGPSMKDWRGGRGASQNIIPSSTGAA 301 (425)
Q Consensus 225 ~~~~~~~~IISnaSCTTn~Lap~lk~L~d~fGI~--~~~~TTvhAvt~~q~-~vDg~~~kd~r~gr~aa~NIIP~~tGaa 301 (425)
+.+.. .+||+||+|+|+++++.|+||+++++|+ ++.++|+|++||+++ .++..+ ...+..|+.|+..+.+
T Consensus 144 e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~------~~e~~~n~~~y~~~~h 216 (351)
T 1vkn_A 144 EEIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYL------FSEVNESLRPYNVAKH 216 (351)
T ss_dssp HHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGB------HHHHTTCCEECSCSCC
T ss_pred HHhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccc------hhHHhcccccCCcccc
Confidence 88874 5899999999999999999999999999 999999999999965 333322 1134568888887644
Q ss_pred -------HHHHhhcCCCCCceeEEEEEeeeccceeeeEEEEecCCCCHHHHHHHHHHhhcC-CCCccccccCCceEeecC
Q 014424 302 -------KAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEG-SLKGILGYTDEDVVSNDF 373 (425)
Q Consensus 302 -------kav~kVLPeL~gkit~~avRVPv~~gs~~dltv~lek~~s~eeI~~alk~a~~~-~lkgil~yte~~~VS~Df 373 (425)
++++|++.. ..+++.+|+|||+++||+++++++++ ++.+|++++|++++++ ++--++.-.+-|-.- +-
T Consensus 217 ~h~pEi~~el~~i~~~-~~~v~ftp~rvPv~rG~~~tv~v~l~--~~~eei~~~l~~~Y~~~pfV~v~~~~~~P~~~-~v 292 (351)
T 1vkn_A 217 RHVPEMEQELGKISGK-KVNVVFTPHLVPMTRGILSTIYVKTD--KSLEEIHEAYLEFYKNEPFVHVLPMGIYPSTK-WC 292 (351)
T ss_dssp THHHHHHHHHHHHHTS-CCEEEEEEEEESSSSCEEEEEEEECS--SCHHHHHHHHHHHHTTCTTEEECCTTCCCCGG-GG
T ss_pred ccHHHHHHHHHHhhCC-CCCEEEEEEEeccccEEEEEEEEEEc--CCHHHHHHHHHHhhCCCCCEEEeCCCCCcChH-Hh
Confidence 334555542 35799999999999999999999998 8999999999998763 333332211112111 22
Q ss_pred CCCCcceEeeCCCcccccCCeEEEEEEeCCC-cchhhhHHHHHHHHHH
Q 014424 374 VGDSRSSIFDAKAGIGLSASFMKLVSWYDNE-WGYSNRVLDLIEHMAL 420 (425)
Q Consensus 374 ~~~~~s~i~d~~~~~~~~~~~vKl~~WyDNE-~gys~r~vdl~~~~~~ 420 (425)
.|..+..|- .... ...+.+.+++=-||= +|=|-+-|-.|+.|..
T Consensus 293 ~gtn~~~Ig-~~~d--~~~~~l~~~s~~DNL~KGAAgqAVQn~nlm~G 337 (351)
T 1vkn_A 293 YGSNHVFIG-MQME--ERTNTLILMSAIDNLVKGASGQAVQNMNIMFG 337 (351)
T ss_dssp TTSSCEEEE-EEEE--TTTTEEEEEEEECTTTTTTHHHHHHHHHHHTT
T ss_pred cCCceEEEE-EEEc--CCCCEEEEEEEcccHHHhHHHHHHHHHHHHhC
Confidence 232222221 1000 012445555558994 5666666666666643
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.49 E-value=1.1e-07 Score=94.36 Aligned_cols=149 Identities=19% Similarity=0.226 Sum_probs=92.8
Q ss_pred ceeEEEEccChHHHHHHHHHHc-CCCceEEEEcCCCCCh--HHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 89 NTKVGINGFGRIGRLVLRVAAF-RDDVDVVAVNDPFIDA--KYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~-~~~~evvaInd~~~~~--~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
++||||+|+|.||+.+++.+.+ ++.++++++.|...+. ..++. + +|. .. ..++ + . .+.
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~--~----~g~---~~-~~~~--~--e----~ll- 64 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ--R----MGV---TT-TYAG--V--E----GLI- 64 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH--H----TTC---CE-ESSH--H--H----HHH-
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHH--H----cCC---Cc-ccCC--H--H----HHH-
Confidence 5899999999999999999976 7889999999853221 11111 1 111 00 0000 0 0 000
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhC--CCCEEEEe-CCCCCCCcEEeecCccccCC--CCcEEecCCch
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKG--GAKKVVIS-APSADAPMFVVGVNEKTYKP--NMNIVSNASCT 240 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~a--GakkVVIS-aps~Dvp~vV~gVN~~~~~~--~~~IISnaSCT 240 (425)
++.+| .++|+||+|||.....+.+...+++ |. .|++ .|..-.|..++++|.+.... ..+++++++|.
T Consensus 65 ----~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~g~~ 136 (312)
T 1nvm_B 65 ----KLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGGQA 136 (312)
T ss_dssp ----HSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHHHHH
T ss_pred ----hccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCcccccccccCccCHHHHHhccCCcEEEeCCcc
Confidence 11112 3799999999988888999999988 76 4443 33222466677778666532 23577777775
Q ss_pred hhhHHhHHHHHHhhcCeeEE-EEEeeee
Q 014424 241 TNCLAPLAKVVHEEFGILEG-LMTTVHA 267 (425)
Q Consensus 241 Tn~Lap~lk~L~d~fGI~~~-~~TTvhA 267 (425)
+ .|++..+.+.+..... .+.++++
T Consensus 137 ~---ipl~~a~~~~~~~~~~~iv~~i~s 161 (312)
T 1nvm_B 137 T---IPMVAAVSRVAKVHYAEIVASISS 161 (312)
T ss_dssp H---HHHHHHHHTTSCEEEEEEEEEEEG
T ss_pred c---chHHHHhhhhccchhHhHhhhhhc
Confidence 4 5777777777765432 4555553
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.91 E-value=2.3e-05 Score=77.27 Aligned_cols=90 Identities=23% Similarity=0.225 Sum_probs=64.5
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
+++||||+|+|++|+.+++.+.++++++++++.|+.. .+ ++. -| +.++ .
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~-~~-------------~~~-------------~g--v~~~--~ 50 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRA-TL-------------DTK-------------TP--VFDV--A 50 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSS-CC-------------SSS-------------SC--EEEG--G
T ss_pred CCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCH-HH-------------hhc-------------CC--Ccee--C
Confidence 3579999999999999999999888999999988521 10 000 01 1111 2
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+.+++- .++|+|++||+.....+.+..++++|. .|+++.|.
T Consensus 51 d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 51 DVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp GGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred CHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 333332 379999999998888888889998875 67776653
No 47
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.78 E-value=3.7e-05 Score=75.29 Aligned_cols=94 Identities=22% Similarity=0.232 Sum_probs=67.0
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
|++||||+|+|.+|+..++.+.+.+++++++|.|+ +++....+.+. +|. . ..
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~~---~~~---~--~~------------------ 53 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAGA---YGC---E--VR------------------ 53 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHHH---TTC---E--EC------------------
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHHH---hCC---C--cC------------------
Confidence 67899999999999999999998888999999995 55543333220 110 0 10
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+.++|+|+-||......+.+...+++| |.|++-.|
T Consensus 54 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 54 TIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 11111 01236899999999998899999999998 67887666
No 48
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.75 E-value=5.8e-05 Score=74.76 Aligned_cols=92 Identities=23% Similarity=0.357 Sum_probs=65.7
Q ss_pred ceeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+. .++++.+.++++|++|.|+ +++... - .|.+. . ++ .
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~--~-------~~~~~-~---------------~~--~ 57 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVH--A-------DWPAI-P---------------VV--S 57 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHH--T-------TCSSC-C---------------EE--S
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHH--h-------hCCCC-c---------------eE--C
Confidence 589999999999997 7888888889999999995 555432 0 11110 0 11 0
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++-.|
T Consensus 58 ~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 58 DPQML-FNDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp CHHHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 11211 01236899999999988899999999999 67888666
No 49
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.73 E-value=3.9e-05 Score=75.12 Aligned_cols=87 Identities=20% Similarity=0.245 Sum_probs=59.9
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
++||||+|+|.||+.+++.+.++++++|++|.|+ +++.... +|. ....+ .+
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~--~~~~~~~-------~g~------------------~~~~~--~~ 59 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR--NPAEVPF-------ELQ------------------PFRVV--SD 59 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------CCT------------------TSCEE--SS
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHH-------cCC------------------CcCCH--HH
Confidence 5899999999999999999998889999999885 3332110 110 00011 12
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEe
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVIS 209 (425)
..+. .++|+|+.||+.....+.+...+++|. .|+..
T Consensus 60 l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~e 95 (304)
T 3bio_A 60 IEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADS 95 (304)
T ss_dssp GGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEEC
T ss_pred HHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEEC
Confidence 2222 379999999999998999999999875 45543
No 50
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.72 E-value=4.6e-05 Score=75.18 Aligned_cols=97 Identities=28% Similarity=0.360 Sum_probs=67.4
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
|++||||+|+|.+|+..++.+.+.+++++++|.|+ +++....+.+ .+|. . . ++ .
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~---~-~---------------~~--~ 54 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAISDV--REDRLREMKE---KLGV---E-K---------------AY--K 54 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHHH---HHTC---S-E---------------EE--S
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HhCC---C-c---------------ee--C
Confidence 66899999999999999999988889999999985 5554333221 1110 0 0 11 0
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+.+++ ..+.++|+|+-||......+.+...+++| |.|++-.|.
T Consensus 55 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 97 (344)
T 3ezy_A 55 DPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKPL 97 (344)
T ss_dssp SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred CHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECCC
Confidence 11111 01237899999999988889999999998 678776663
No 51
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.69 E-value=6.6e-05 Score=74.75 Aligned_cols=101 Identities=26% Similarity=0.236 Sum_probs=67.4
Q ss_pred CCCCceeEEEEccChHHHHHHHHHH-cCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEE
Q 014424 85 RSDGNTKVGINGFGRIGRLVLRVAA-FRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKV 163 (425)
Q Consensus 85 ~~~m~ikVaInGfGrIGr~vlr~l~-~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v 163 (425)
.+||++||||+|+|.||+..++.+. ..++++|++|.|+ +++....+.+ .||. ... .
T Consensus 19 ~~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~g~---~~~---------------~ 75 (357)
T 3ec7_A 19 FQGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI--VAGRAQAALD---KYAI---EAK---------------D 75 (357)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS--STTHHHHHHH---HHTC---CCE---------------E
T ss_pred cCCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH---HhCC---CCe---------------e
Confidence 4466899999999999999999998 6788999999996 3333222211 1110 001 1
Q ss_pred EecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 164 FSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 164 ~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+ .+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++-.|.
T Consensus 76 ~--~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKPl 120 (357)
T 3ec7_A 76 Y--NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKPL 120 (357)
T ss_dssp E--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred e--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecCc
Confidence 1 011111 01236899999999999999999999999 678886663
No 52
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.64 E-value=9.4e-05 Score=73.22 Aligned_cols=96 Identities=21% Similarity=0.282 Sum_probs=65.6
Q ss_pred CceeEEEEccChHHH-HHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 88 GNTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 88 m~ikVaInGfGrIGr-~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
|++||||+|+|.+|+ ..++++.+.++++|++|.|+. ..+.++.- | +.+. +. ++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~--~----~~~~--~~---------------~~-- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAP--F----KEKG--VN---------------FT-- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHH--H----HTTT--CE---------------EE--
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHh--h----CCCC--Ce---------------EE--
Confidence 678999999999998 678888888899999999963 22222111 1 1100 01 11
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+.+++- .+.++|+|+-||....-.+.+...+++| |.|++--|
T Consensus 55 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (349)
T 3i23_A 55 ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKP 97 (349)
T ss_dssp SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECC
Confidence 1222221 1236899999999988899999999999 67877555
No 53
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.64 E-value=0.0001 Score=72.66 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=68.0
Q ss_pred CceeEEEEccChHHHHHHHHHH-cCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 88 GNTKVGINGFGRIGRLVLRVAA-FRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~-~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
|++||||+|+|.+|+..++.+. ..++++|++|.|+ +++....+.+ .||. ... ++
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~~---~~g~---~~~---------------~~-- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVVE---QYQL---NAT---------------VY-- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHHH---HTTC---CCE---------------EE--
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCC---CCe---------------ee--
Confidence 6689999999999999999998 6788999999985 5554322221 1221 001 11
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+.+++ ..+.++|+|+-||......+.+..++++| |.|++-.|.
T Consensus 56 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP~ 99 (344)
T 3mz0_A 56 PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKPL 99 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCCC
Confidence 011111 01236899999999998899999999999 678886663
No 54
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.59 E-value=0.00014 Score=71.98 Aligned_cols=97 Identities=11% Similarity=0.078 Sum_probs=67.9
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
+|++||||+|+|.+|+..++.+.+.++++|++|.|+ +++....+.+ .+|. ...
T Consensus 3 ~~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~-----~~~----------------- 55 (354)
T 3db2_A 3 YNPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGK---RYNC-----AGD----------------- 55 (354)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHH---HHTC-----CCC-----------------
T ss_pred CCcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcCC-----CCc-----------------
Confidence 346899999999999999999998888999999985 5554332221 0110 000
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+.+++ ..+.++|+|+-||......+.+...+++| |.|++-.|.
T Consensus 56 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 99 (354)
T 3db2_A 56 ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKPI 99 (354)
T ss_dssp SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccCC
Confidence 011111 01236899999999988889999999988 578776663
No 55
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.56 E-value=0.00018 Score=70.84 Aligned_cols=94 Identities=20% Similarity=0.330 Sum_probs=66.9
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
++||||+|+|.+|+..++.|.+.++++|++|.|. +++....+.+ .+| +.. + .+
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g-----~~~---------------~--~~ 56 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADP--FIEGAQRLAE---ANG-----AEA---------------V--AS 56 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---TTT-----CEE---------------E--SS
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcC-----Cce---------------e--CC
Confidence 4799999999999999999998888999999985 5554322221 111 111 1 01
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+++ ..+.++|+|+-||......+.+..++++| |.|++-.|
T Consensus 57 ~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 97 (344)
T 3euw_A 57 PDEV-FARDDIDGIVIGSPTSTHVDLITRAVERG-IPALCEKP 97 (344)
T ss_dssp HHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEECSC
T ss_pred HHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEEECC
Confidence 2111 11237899999999998899999999998 56777666
No 56
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.55 E-value=0.00013 Score=71.65 Aligned_cols=97 Identities=20% Similarity=0.160 Sum_probs=66.2
Q ss_pred CceeEEEEccChHHHHHHHHHHcCC--CceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRD--DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~--~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
|++||||+|+|.||+..++.+...+ +++|++|.|+ +++....+.+ .||. . . ++
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~--~~~~a~~~a~---~~~~---~-~---------------~~- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFAQ---KHDI---P-K---------------AY- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS--SHHHHHHHHH---HHTC---S-C---------------EE-
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC--CHHHHHHHHH---HcCC---C-c---------------cc-
Confidence 6789999999999999999998765 4799999985 5554322221 1111 0 0 00
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++--|.
T Consensus 56 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP~ 99 (334)
T 3ohs_X 56 -GSYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKPM 99 (334)
T ss_dssp -SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred -CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCC
Confidence 011111 01236899999999998899999999998 678886663
No 57
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.55 E-value=0.00014 Score=70.55 Aligned_cols=96 Identities=16% Similarity=0.193 Sum_probs=66.0
Q ss_pred CCCceeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEE
Q 014424 86 SDGNTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (425)
Q Consensus 86 ~~m~ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~ 164 (425)
.|+++||||+|+|.+|+. +++.|.+.+++++++|.|+ +++....+.+ .||. .. .
T Consensus 3 ~M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~~---~~-~---------------- 57 (308)
T 3uuw_A 3 AMKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKICS---DYRI---MP-F---------------- 57 (308)
T ss_dssp --CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHHH---HHTC---CB-C----------------
T ss_pred ccccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC---CC-c----------------
Confidence 345789999999999996 8999988888999999995 5554433221 0110 00 0
Q ss_pred ecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 165 ~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+.+++ -+ ++|+|+-||......+.+...+++|. .|++--|.
T Consensus 58 --~~~~~l--l~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~ 99 (308)
T 3uuw_A 58 --DSIESL--AK-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKPL 99 (308)
T ss_dssp --SCHHHH--HT-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred --CCHHHH--Hh-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCCC
Confidence 011111 01 68999999999988999999999884 57775554
No 58
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.54 E-value=9.3e-05 Score=71.99 Aligned_cols=144 Identities=20% Similarity=0.277 Sum_probs=80.7
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
|+||+|+| +|++||.+++++.++++++||++-|...+. + .|+-.+++- + +.- | +.++ .
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~-~----------~G~d~gel~---g--~~~-g--v~v~--~ 65 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP-Q----------LGQDAGAFL---G--KQT-G--VALT--D 65 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT-T----------TTSBTTTTT---T--CCC-S--CBCB--C
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc-c----------ccccHHHHh---C--CCC-C--ceec--C
Confidence 47999999 999999999999999999999987742111 0 011100000 0 000 1 1111 1
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCCcEEeecCccccC------CCCcEEec--CCc
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYK------PNMNIVSN--ASC 239 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp~vV~gVN~~~~~------~~~~IISn--aSC 239 (425)
|.+++ -.++|+|||+|......+.+...++.|.. +|+... |.+++.++ ....++-. =|=
T Consensus 66 dl~~l---l~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVigTT---------G~s~~~~~~L~~aa~~~~vv~a~N~s~ 132 (272)
T 4f3y_A 66 DIERV---CAEADYLIDFTLPEGTLVHLDAALRHDVK-LVIGTT---------GFSEPQKAQLRAAGEKIALVFSANMSV 132 (272)
T ss_dssp CHHHH---HHHCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCC---------CCCHHHHHHHHHHTTTSEEEECSCCCH
T ss_pred CHHHH---hcCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECC---------CCCHHHHHHHHHHhccCCEEEECCCCH
Confidence 22221 12589999999776677788888888874 445332 22333221 12334443 444
Q ss_pred hhhhHHhHHHHHHhhcC-eeEEEEEeee
Q 014424 240 TTNCLAPLAKVVHEEFG-ILEGLMTTVH 266 (425)
Q Consensus 240 TTn~Lap~lk~L~d~fG-I~~~~~TTvh 266 (425)
-.|-|.-+++..-+.|+ =-.+.+.-.|
T Consensus 133 Gv~l~~~~~~~aa~~l~~~~diei~E~H 160 (272)
T 4f3y_A 133 GVNVTMKLLEFAAKQFAQGYDIEIIEAH 160 (272)
T ss_dssp HHHHHHHHHHHHHHHTSSSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCcCCCEEEEEec
Confidence 45555555555555553 1134455566
No 59
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.54 E-value=0.00013 Score=75.75 Aligned_cols=94 Identities=21% Similarity=0.264 Sum_probs=62.6
Q ss_pred CC-ceeEEEEccChHHHHHHHHHHcC---------CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEE
Q 014424 87 DG-NTKVGINGFGRIGRLVLRVAAFR---------DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEI 156 (425)
Q Consensus 87 ~m-~ikVaInGfGrIGr~vlr~l~~~---------~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i 156 (425)
|| ++||||+|+|.||+.+++.|.++ ++++|++|.|. +.+....++ + . ..
T Consensus 7 MMk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~--~~~~~~~~~--~-------~-~~--------- 65 (444)
T 3mtj_A 7 GMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR--NLDKAEALA--G-------G-LP--------- 65 (444)
T ss_dssp SCSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS--CHHHHHHHH--T-------T-CC---------
T ss_pred hhCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC--CHHHhhhhc--c-------c-Cc---------
Confidence 44 58999999999999999988653 57999999985 443321111 0 0 00
Q ss_pred CCEEEEEEecCCCCCCCCcccCcCEEEEccCc-ccCHHHHHHHHhCCCCEEEEeCC
Q 014424 157 NGKLIKVFSKRDPAEIPWGDYGVDYVVESSGV-FTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 157 ~Gk~I~v~~~~dp~~i~W~~~gvDiV~esTG~-f~s~e~a~~hl~aGakkVVISap 211 (425)
++ .|++++ ..+.++|+|++||+. ....+.+..++++|. .|+..+|
T Consensus 66 ------~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 66 ------LT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp ------EE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred ------cc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 11 122111 112478999999985 677788899999885 5666555
No 60
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.51 E-value=0.00016 Score=71.74 Aligned_cols=94 Identities=16% Similarity=0.137 Sum_probs=65.6
Q ss_pred ceeEEEEccChHHH-HHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr-~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+ .+++.|.+.++++|++|.|+ +++....+.+ .||. . .+ .
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g~---~-----------------~~--~ 79 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFTE---RFGG---E-----------------PV--E 79 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHHH---HHCS---E-----------------EE--E
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHHH---HcCC---C-----------------Cc--C
Confidence 58999999999998 78999998888999999985 5544322221 0110 0 00 0
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+.++|+|+-||....-.+.+...+++| |.|++--|
T Consensus 80 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 121 (350)
T 3rc1_A 80 GYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAG-KHVLAEKP 121 (350)
T ss_dssp SHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CcEEEeCC
Confidence 11111 01236899999999999899999999998 46777665
No 61
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.49 E-value=0.0002 Score=71.21 Aligned_cols=92 Identities=21% Similarity=0.325 Sum_probs=65.6
Q ss_pred ceeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+. .++++...++++|++|.|+ +++..+. +| .+. . ++ .
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~~-------~~~-~---------------~~--~ 55 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKR--DF-------PDA-E---------------VV--H 55 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHH--HC-------TTS-E---------------EE--S
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--hC-------CCC-c---------------eE--C
Confidence 479999999999997 7888888888999999995 4544221 11 110 1 11 1
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++--|
T Consensus 56 ~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 56 ELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp STHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 22222 11247999999999999999999999999 67877666
No 62
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.49 E-value=0.00013 Score=71.56 Aligned_cols=96 Identities=15% Similarity=0.140 Sum_probs=66.1
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
+++||||+|+|.+|+.+++.+.+.++++|++|.|+ +++....+.+ .||. . .. + .
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~---~-~~---------------~--~ 57 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR--RLENAQKMAK---ELAI---P-VA---------------Y--G 57 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS--SSHHHHHHHH---HTTC---C-CC---------------B--S
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHH---HcCC---C-ce---------------e--C
Confidence 35799999999999999999998888999999985 4443322221 1111 0 00 0 0
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+.++|+|+-||......+.+...+++| |.|++-.|
T Consensus 58 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 99 (330)
T 3e9m_A 58 SYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKP 99 (330)
T ss_dssp SHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSS
T ss_pred CHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCC
Confidence 11111 01236899999999998889999999998 56777665
No 63
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.45 E-value=0.00023 Score=69.97 Aligned_cols=94 Identities=22% Similarity=0.222 Sum_probs=65.1
Q ss_pred eeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
+||||+|+|.||+. +++++.+.|+++|+||.|+ +++....+.+ .||. . .+ +. +
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~---~-~~---------------y~--d 77 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMAD---RFSV---P-HA---------------FG--S 77 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHHH---HHTC---S-EE---------------ES--S
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC---C-ee---------------eC--C
Confidence 79999999999986 6788888889999999995 5554322221 1111 0 11 10 1
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+++ ..+.++|.|+=||....-.+.+..++++| |.|++=-|
T Consensus 78 ~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKP 118 (350)
T 4had_A 78 YEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAG-KHVVCEKP 118 (350)
T ss_dssp HHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred HHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcC-CEEEEeCC
Confidence 1111 11247899999999999999999999998 57777555
No 64
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.41 E-value=0.00034 Score=69.60 Aligned_cols=94 Identities=22% Similarity=0.290 Sum_probs=66.8
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
++||||+|+|.||+..++.+.+.++++|++|.|+ +++.....-+| |. .. + .+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~a~~~----g~-----~~---------------~--~~ 56 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI--LAEKREAAAQK----GL-----KI---------------Y--ES 56 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS--SHHHHHHHHTT----TC-----CB---------------C--SC
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHhc----CC-----ce---------------e--CC
Confidence 5899999999999999999998889999999985 55543221111 11 00 0 01
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+++ ..+.++|+|+-||....-.+.+..++++| |.|++-.|.
T Consensus 57 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP~ 98 (359)
T 3e18_A 57 YEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKPV 98 (359)
T ss_dssp HHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred HHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCCC
Confidence 1111 01237899999999998899999999998 578776663
No 65
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.39 E-value=0.00031 Score=70.02 Aligned_cols=92 Identities=21% Similarity=0.290 Sum_probs=64.9
Q ss_pred ceeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+. .++++.+.++++|++|.|+ +++.... + |.+. . ++ .
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~-------~~~~-~---------------~~--~ 57 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVKR--D-------LPDV-T---------------VI--A 57 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHH--H-------CTTS-E---------------EE--S
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--h-------CCCC-c---------------EE--C
Confidence 579999999999996 7888888889999999995 5554321 1 1111 1 11 0
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++--|
T Consensus 58 ~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 99 (364)
T 3e82_A 58 SPEAA-VQHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKP 99 (364)
T ss_dssp CHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCC
Confidence 11111 01237899999999999999999999998 56777555
No 66
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.38 E-value=0.00019 Score=70.86 Aligned_cols=96 Identities=21% Similarity=0.213 Sum_probs=63.3
Q ss_pred CceeEEEEccChHHHH-HHH-HHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 88 GNTKVGINGFGRIGRL-VLR-VAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 88 m~ikVaInGfGrIGr~-vlr-~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
|++||||+|+|.+|+. .++ ++...++++|++|.|+. ++.. ..++ +|.+. . ++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~--~~~~-~~~~------~~~~~-~---------------~~- 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRH--AKPE-EQAP------IYSHI-H---------------FT- 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSS--CCGG-GGSG------GGTTC-E---------------EE-
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCC--HhHH-HHHH------hcCCC-c---------------eE-
Confidence 5689999999999995 677 55677889999999963 2211 1111 11110 1 11
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+.+++ ..+.++|+|+-||....-.+.+...+++| |.|++--|.
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (345)
T 3f4l_A 55 -SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKPF 98 (345)
T ss_dssp -SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 122222 11236899999999998889999999998 677775553
No 67
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.38 E-value=0.00025 Score=69.58 Aligned_cols=97 Identities=18% Similarity=0.252 Sum_probs=60.3
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
|++||+|+| +|++||.+++++.++|+++||++-|...+. + .|+-.+++ + + +.-.| +.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~-~----------~G~d~gel-~--G--~~~~g--v~v~-- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSS-F----------VDKDASIL-I--G--SDFLG--VRIT-- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCT-T----------TTSBGGGG-T--T--CSCCS--CBCB--
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc-c----------cccchHHh-h--c--cCcCC--ceee--
Confidence 468999999 999999999999999999999998852111 0 01101100 0 0 00001 1122
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
.|.+++- .++|+|+|+|......+.+...++.|.. +|+
T Consensus 80 ~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 80 DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 1333321 2689999999766667777888888874 444
No 68
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.37 E-value=0.00049 Score=67.09 Aligned_cols=94 Identities=22% Similarity=0.262 Sum_probs=65.4
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
|+||||+|+|.+|+.+++.+.+.+++++++|.|. +++....+.+ .+|. .. ++ .+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~~~---~~~~----~~---------------~~--~~ 54 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR--KLETAATFAS---RYQN----IQ---------------LF--DQ 54 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHHGG---GSSS----CE---------------EE--SC
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHH---HcCC----Ce---------------Ee--CC
Confidence 3699999999999999999988888999999985 5554322211 1111 01 11 12
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+++- +.++|+|+.||......+.+..++++| |.|++-.|
T Consensus 55 ~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~g-k~V~~EKP 94 (325)
T 2ho3_A 55 LEVFF--KSSFDLVYIASPNSLHFAQAKAALSAG-KHVILEKP 94 (325)
T ss_dssp HHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred HHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcC-CcEEEecC
Confidence 22221 247899999999888888899999988 46777555
No 69
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.35 E-value=0.0002 Score=68.59 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.4
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
|+||+|+|+|++||.+++++.++++ +|+++-|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~ 35 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGH-EIVGVIEN 35 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEec
Confidence 4799999999999999999999998 99998774
No 70
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.32 E-value=0.00072 Score=69.25 Aligned_cols=99 Identities=20% Similarity=0.120 Sum_probs=65.9
Q ss_pred ceeEEEEccChHHH-HHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr-~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+ .+++.+.+.++++|++|.|+ +.+....+.+ .||.-...+. ++ .
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~a~---~~g~~~~~~~---------------~~--~ 140 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVAA---EYGVDPRKIY---------------DY--S 140 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS--CHHHHHHHHH---HTTCCGGGEE---------------CS--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCCCccccc---------------cc--C
Confidence 58999999999997 89999888888999999995 5554322211 1111000011 11 1
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++- .+.++|+|+.||....-.+.+..++++| |.|++--|
T Consensus 141 ~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aG-k~Vl~EKP 182 (433)
T 1h6d_A 141 NFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAG-KHVMCEKP 182 (433)
T ss_dssp SGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 222221 1237999999999988889999999998 46777544
No 71
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.32 E-value=9.3e-05 Score=69.36 Aligned_cols=135 Identities=19% Similarity=0.212 Sum_probs=78.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
|||||+|+|++|+.+++.|.+ ++++++++.|.. .+ . .. .+ .++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~-~g~~lv~v~d~~--~~--------------------~--~~----------~~--~~~ 43 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER-NGFEIAAILDVR--GE--------------------H--EK----------MV--RGI 43 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEECSS--CC--------------------C--TT----------EE--SSH
T ss_pred CEEEEECCCHHHHHHHHHHhc-CCCEEEEEEecC--cc--------------------h--hh----------hc--CCH
Confidence 499999999999999999884 579998888741 10 0 00 11 123
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCC-CCCcEEeecCccccCCCCcEEecCCchhhhHHhHH
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLA 248 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~-Dvp~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~l 248 (425)
+++- +.++|+|++|++.....+.+..++++|. .|++..|.. +.+.+...+-...-.....++-.+++... ...+
T Consensus 44 ~~l~--~~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~--~~~~ 118 (236)
T 2dc1_A 44 DEFL--QREMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGG--LDAI 118 (236)
T ss_dssp HHHT--TSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSC--HHHH
T ss_pred HHHh--cCCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccC--hHHH
Confidence 2221 0378999999998888888889999887 344433321 11100001110000012333333444322 2334
Q ss_pred HHHHhhcCeeEEEEEeeeec
Q 014424 249 KVVHEEFGILEGLMTTVHAT 268 (425)
Q Consensus 249 k~L~d~fGI~~~~~TTvhAv 268 (425)
+..+. |+++..+++.|..
T Consensus 119 ~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 119 FSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHTGG--GEEEEEEEEEEEG
T ss_pred HHhhc--cccEEEEEEEcCh
Confidence 44443 8999999998865
No 72
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.32 E-value=0.00046 Score=56.01 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=61.7
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
|++||.|.|.|.+|+.+++.|.+++..+|+.+.. +++.+..+..+ | +.. + .....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~----~-----~~~-----~--------~~d~~ 58 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRM----G-----VAT-----K--------QVDAK 58 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTT----T-----CEE-----E--------ECCTT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhC----C-----CcE-----E--------EecCC
Confidence 4469999999999999999999886477776654 34443332210 0 000 0 00011
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISa 210 (425)
+++.+.-.-.++|+||.|+|.......+...++.|.++++++.
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCS
T ss_pred CHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecC
Confidence 1111110013789999999988888888888899998776653
No 73
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.31 E-value=0.00048 Score=67.46 Aligned_cols=95 Identities=18% Similarity=0.230 Sum_probs=64.3
Q ss_pred ceeEEEEccChHHHHHHHHHH-cCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRLVLRVAA-FRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~-~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+..++.+. ..+++++++|.|+ +++....+.+ .+|. . . ++.
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a~---~~g~---~-~---------------~~~-- 61 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAKN---ELGV---E-T---------------TYT-- 61 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHHH---TTCC---S-E---------------EES--
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHHH---HhCC---C-c---------------ccC--
Confidence 479999999999999999998 7778999999985 5554322211 1111 0 0 110
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+.++|+|+.||+.....+.+...+++| |.|++-.|
T Consensus 62 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp 103 (346)
T 3cea_A 62 NYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKP 103 (346)
T ss_dssp CHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCC
Confidence 11111 01136899999999988889999999988 56766444
No 74
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.31 E-value=0.00037 Score=69.06 Aligned_cols=98 Identities=13% Similarity=0.198 Sum_probs=65.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
++||||+|+|.||+.+++.+.+.+++++++|.|+ +++....+.+ .||... ... ++. +
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a~---~~~~~~-~~~---------------~~~--~ 62 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR--SLEKAKAFAT---ANNYPE-STK---------------IHG--S 62 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HTTCCT-TCE---------------EES--S
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCCCC-CCe---------------eeC--C
Confidence 5799999999999999999998888999999985 5544322211 122100 001 110 1
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+++ ..+.++|+|+.||......+.+..++++| |.|++-.|
T Consensus 63 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~V~~EKP 103 (362)
T 1ydw_A 63 YESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKG-KHILLEKP 103 (362)
T ss_dssp HHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTT-CEEEECSS
T ss_pred HHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCC-CeEEEecC
Confidence 1111 01236899999999888889999999988 46777555
No 75
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.30 E-value=0.00019 Score=70.85 Aligned_cols=87 Identities=20% Similarity=0.220 Sum_probs=63.6
Q ss_pred ceeEEEEccChHHH-HHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr-~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.||+ ..++++.+.++++|++|.|+. .+ ++ + ++.+.
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~--~~-------------~~--------g---------~~~~~-- 70 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH--GT-------------VE--------G---------VNSYT-- 70 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS--CC-------------CT--------T---------SEEES--
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC--hh-------------hc--------C---------CCccC--
Confidence 58999999999999 799999998899999999962 11 01 0 01111
Q ss_pred CCCCCCCcc-cCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGD-YGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~-~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+ .++|+|+-||....-.+.+..++++| |.|++--|
T Consensus 71 ~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 113 (330)
T 4ew6_A 71 TIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKP 113 (330)
T ss_dssp SHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCC
Confidence 12211 011 36899999999888889999999999 67877655
No 76
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.27 E-value=0.0002 Score=70.16 Aligned_cols=96 Identities=15% Similarity=0.206 Sum_probs=64.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
++||||+|+|.||+.+++.+...+++++++|.|+ +++....+. ..||. . ..+ .+
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~--~~~~~~~~a---~~~~~---~----------------~~~--~~ 58 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR--TLESAQAFA---NKYHL---P----------------KAY--DK 58 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS--CSSTTCC------CCCC---S----------------CEE--SC
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHH---HHcCC---C----------------ccc--CC
Confidence 5799999999999999999988888999999885 222110000 00000 0 011 12
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+++- .+.++|+|+-||....-.+.+...+++| |.|++-.|.
T Consensus 59 ~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 100 (329)
T 3evn_A 59 LEDML-ADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKPF 100 (329)
T ss_dssp HHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred HHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccCC
Confidence 22211 1237899999999988889999999998 577776663
No 77
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.25 E-value=0.00028 Score=70.16 Aligned_cols=92 Identities=18% Similarity=0.286 Sum_probs=64.6
Q ss_pred ceeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+. .++++.+.++++|++|.|+ +++..+ .+|.+. . ++ .
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~---------~~~~~~-~---------------~~--~ 55 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER--SKELSK---------ERYPQA-S---------------IV--R 55 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS--SCCGGG---------TTCTTS-E---------------EE--S
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHH---------HhCCCC-c---------------eE--C
Confidence 589999999999997 7888888889999999996 332211 111111 1 11 1
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++--|
T Consensus 56 ~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (362)
T 3fhl_A 56 SFKEL-TEDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKP 97 (362)
T ss_dssp CSHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecC
Confidence 22222 11236999999999998899999999998 57777666
No 78
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.25 E-value=0.001 Score=63.64 Aligned_cols=120 Identities=18% Similarity=0.269 Sum_probs=73.9
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
|||+|+| +|++||.+++++.++++++|+++-|...+.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~----------------------------------------- 39 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS----------------------------------------- 39 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH-----------------------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH-----------------------------------------
Confidence 4999999 7999999999998888899999877411110
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCCcEEeecCccccCC---------CCcEE--ecC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKP---------NMNIV--SNA 237 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp~vV~gVN~~~~~~---------~~~II--Sna 237 (425)
.+. ..++|+|+|+|......+.+...++.|... |+..+ |.+++.++. ...++ +|-
T Consensus 40 --~~~--~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~-VigTT---------G~~~e~~~~l~~aa~~~~~~~vv~a~N~ 105 (245)
T 1p9l_A 40 --LLT--DGNTEVVIDFTHPDVVMGNLEFLIDNGIHA-VVGTT---------GFTAERFQQVESWLVAKPNTSVLIAPNF 105 (245)
T ss_dssp --HHH--HTTCCEEEECSCTTTHHHHHHHHHHTTCEE-EECCC---------CCCHHHHHHHHHHHHTSTTCEEEECSCC
T ss_pred --HHh--ccCCcEEEEccChHHHHHHHHHHHHcCCCE-EEcCC---------CCCHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 000 025688888887777777777778877643 33222 333332210 12233 333
Q ss_pred CchhhhHHhHHHHHHhhcCeeEEEEEeee
Q 014424 238 SCTTNCLAPLAKVVHEEFGILEGLMTTVH 266 (425)
Q Consensus 238 SCTTn~Lap~lk~L~d~fGI~~~~~TTvh 266 (425)
|=-.|-|.-+++..-+.|. .+.+.-.|
T Consensus 106 siGv~ll~~l~~~aa~~~~--dieIiE~H 132 (245)
T 1p9l_A 106 AIGAVLSMHFAKQAARFFD--SAEVIELH 132 (245)
T ss_dssp CHHHHHHHHHHHHHGGGCS--EEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhhcC--CEEEEECc
Confidence 4444555556666656663 66666666
No 79
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.25 E-value=0.00027 Score=69.62 Aligned_cols=98 Identities=17% Similarity=0.111 Sum_probs=66.5
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCC-------ceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCE
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDD-------VDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGK 159 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~-------~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk 159 (425)
|-++||||+|+|.||+.-++++...|. .+|++|.|+ +++....+.+ .||. . .+
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--~~~~a~~~a~---~~g~---~-~~----------- 63 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--DAEAVRAAAG---KLGW---S-TT----------- 63 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--SHHHHHHHHH---HHTC---S-EE-----------
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--CHHHHHHHHH---HcCC---C-cc-----------
Confidence 336899999999999998888876543 489999995 5654433221 1111 0 11
Q ss_pred EEEEEecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 160 LIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 160 ~I~v~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+ .|.+++ ..+.++|.|+=||....-.+.+.+++++| |.|++=-|-
T Consensus 64 ----~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKPl 108 (390)
T 4h3v_A 64 ----E--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKPL 108 (390)
T ss_dssp ----E--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred ----c--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecCc
Confidence 1 011111 11247999999999999999999999999 578886663
No 80
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.23 E-value=0.0006 Score=69.84 Aligned_cols=102 Identities=26% Similarity=0.308 Sum_probs=67.9
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhh-cccccCCccceEEEeCCCeEEECCEEEEEEe-
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDSTLEINGKLIKVFS- 165 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~-yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~- 165 (425)
+++||||+|+|.+|+..++.+...++++|++|.|+ +++....+.+ +. .+|. . ... ++.
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~-~~g~-~-~~~---------------~~~~ 78 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--DPYMVGRAQEILK-KNGK-K-PAK---------------VFGN 78 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--CHHHHHHHHHHHH-HTTC-C-CCE---------------EECS
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHH-hcCC-C-CCc---------------eecc
Confidence 36899999999999999999998889999999995 5554433221 10 0110 0 001 111
Q ss_pred -cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 166 -KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 166 -~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+.+++ ..+.++|+|+-||....-.+.+.+++++|. .|++--|
T Consensus 79 ~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP 123 (444)
T 2ixa_A 79 GNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVS 123 (444)
T ss_dssp STTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCC
T ss_pred CCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 1122221 112469999999999888899999999984 6777544
No 81
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.23 E-value=0.00029 Score=71.06 Aligned_cols=96 Identities=22% Similarity=0.210 Sum_probs=65.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcC--------CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFR--------DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKL 160 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~--------~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~ 160 (425)
++||||+|+|.||+..++++.+. ++++||||.|+ +++....+.+ .||. . .+
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~--~~~~a~~~a~---~~~~---~-~~------------ 84 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ--DQAMAERHAA---KLGA---E-KA------------ 84 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS--SHHHHHHHHH---HHTC---S-EE------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC--CHHHHHHHHH---HcCC---C-eE------------
Confidence 58999999999999988888653 35799999995 5554332221 1111 1 11
Q ss_pred EEEEecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 161 IKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 161 I~v~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+. |.+++ ..+.++|+|+-||....-.+.+.+++++| |.|++--|-
T Consensus 85 ---y~--d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP~ 129 (412)
T 4gqa_A 85 ---YG--DWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKPL 129 (412)
T ss_dssp ---ES--SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred ---EC--CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecCC
Confidence 10 11111 11247899999999999999999999999 578886664
No 82
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.21 E-value=0.00054 Score=67.73 Aligned_cols=94 Identities=15% Similarity=0.202 Sum_probs=66.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcC-CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~-~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+..++.+.+. +++++++|.|+ +++....+.+ .+| +. .+ .
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~---~~~-----~~---------------~~--~ 65 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVE---RTG-----AR---------------GH--A 65 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HHC-----CE---------------EE--S
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHH---HcC-----Cc---------------ee--C
Confidence 47999999999999999999987 78999999995 5554332221 011 11 11 1
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+++ ..+.++|+|+-||....-.+.+...+++| |.|++-.|
T Consensus 66 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 107 (354)
T 3q2i_A 66 SLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKP 107 (354)
T ss_dssp CHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCC
Confidence 22211 11237899999999988889999999998 67777655
No 83
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.21 E-value=0.0007 Score=67.57 Aligned_cols=85 Identities=16% Similarity=0.240 Sum_probs=58.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcCC--------CceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRD--------DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKL 160 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~--------~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~ 160 (425)
++||||+|+|.||+.+++.+.+++ +++|++|.|. +++. . .+ +. . .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~--~~~~-------~--~~-~~-------~-~------- 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR--DPRK-------P--RA-IP-------Q-E------- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS--CTTS-------C--CS-SC-------G-G-------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC--CHHH-------h--hc-cC-------c-c-------
Confidence 589999999999999999998876 6899999885 2210 0 00 10 0 0
Q ss_pred EEEEecCCCCCCCCcccCcCEEEEccCcc-cCHHHHHHHHhCCCCEEEE
Q 014424 161 IKVFSKRDPAEIPWGDYGVDYVVESSGVF-TTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 161 I~v~~~~dp~~i~W~~~gvDiV~esTG~f-~s~e~a~~hl~aGakkVVI 208 (425)
.++ .|++++- ++|+|++||+.. ...+.+.++|++|. .||.
T Consensus 56 -~~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK-hVVt 96 (332)
T 2ejw_A 56 -LLR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI-PLIT 96 (332)
T ss_dssp -GEE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC-CEEE
T ss_pred -ccc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC-eEEE
Confidence 011 2455542 799999999876 34678888999886 3444
No 84
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.20 E-value=0.00036 Score=70.11 Aligned_cols=95 Identities=22% Similarity=0.272 Sum_probs=66.9
Q ss_pred CceeEEEEccC-hHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 88 GNTKVGINGFG-RIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 88 m~ikVaInGfG-rIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
|++||||+|+| .+|+..++.+...++++|++|.|+ +++....+.+ .||. . .+
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g~-----~---------------~~-- 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP--NEDVRERFGK---EYGI-----P---------------VF-- 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS--CHHHHHHHHH---HHTC-----C---------------EE--
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHH---HcCC-----C---------------eE--
Confidence 56899999999 999999999998889999999995 5554322211 0110 0 11
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+.+++ ..+.++|+|+-||....-.+.+...+++| |.|++-.|
T Consensus 54 ~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 96 (387)
T 3moi_A 54 ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKP 96 (387)
T ss_dssp SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCC
Confidence 011111 11236899999999988889999999998 67877665
No 85
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.19 E-value=0.0012 Score=64.26 Aligned_cols=94 Identities=20% Similarity=0.266 Sum_probs=62.6
Q ss_pred CceeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 88 GNTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 88 m~ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
|++||||+|+|.+|+. +++.|.+.++++++ |.|+ +++....+.+ .+|. . . .+ .
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a~---~~g~---~-~---------------~~-~ 54 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLAT---RYRV---S-A---------------TC-T 54 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHHH---HTTC---C-C---------------CC-S
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHHH---HcCC---C-c---------------cc-c
Confidence 5689999999999984 89999887789999 8885 5554322221 1110 0 0 00 0
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
...+.+ +.++|+|+.||....-.+.+...+++|. .|++-.|
T Consensus 55 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 95 (323)
T 1xea_A 55 DYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKP 95 (323)
T ss_dssp STTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESC
T ss_pred CHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCC
Confidence 011222 2479999999998888888888899884 4666544
No 86
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.15 E-value=0.0018 Score=64.43 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=30.9
Q ss_pred ceeEEEEccChHHHHHHHHHHcC------CCceEEEEcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFR------DDVDVVAVNDP 122 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~------~~~evvaInd~ 122 (425)
++||||+|+|.||+.++++|.++ ++++|++|.|.
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 68999999999999999999875 67999999885
No 87
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.13 E-value=0.0006 Score=67.86 Aligned_cols=96 Identities=20% Similarity=0.236 Sum_probs=66.2
Q ss_pred ceeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.||+. +++.+.+.++++|++|.|+ +++....+.+ +|... . ++ .
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~------~~~~~-~---------------~~--~ 58 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRVHR------FISDI-P---------------VL--D 58 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGGGG------TSCSC-C---------------EE--S
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHH------hcCCC-c---------------cc--C
Confidence 589999999999995 8999998889999999995 5554422221 11100 0 11 0
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+.+++ ..+.++|+|+-||....-.+.+...+++| |.|++-.|.
T Consensus 59 ~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 101 (359)
T 3m2t_A 59 NVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKG-VNVFVEKPP 101 (359)
T ss_dssp SHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTT-CEEEECSCS
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEEECCC
Confidence 11111 01236899999999888889999999998 567776553
No 88
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.12 E-value=0.00035 Score=67.93 Aligned_cols=93 Identities=18% Similarity=0.218 Sum_probs=65.0
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
++||||+|+|.+|+.+++.|.+.+++++++|.|+ +++....+ . .. +..+ .+
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~~~----------~-------~~--------~~~~--~~ 60 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLALV----------P-------PG--------CVIE--SD 60 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHTTC----------C-------TT--------CEEE--SS
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHH----------H-------hh--------Cccc--CC
Confidence 4799999999999999999998888999999985 45432111 1 00 1112 12
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+++ ..+.++|+|+.||......+.+...+++| |.|++-.|.
T Consensus 61 ~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP~ 102 (315)
T 3c1a_A 61 WRSV-VSAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKPL 102 (315)
T ss_dssp THHH-HTCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred HHHH-hhCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCCC
Confidence 2222 01237899999999888888898999988 467775553
No 89
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.11 E-value=0.00076 Score=65.58 Aligned_cols=92 Identities=17% Similarity=0.234 Sum_probs=62.4
Q ss_pred ceeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+. +++.+.+.+++++++|.|.. ++....+.+ .+|. . . + .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~--~~~~~~~~~---~~g~---~--~---------------~--~ 57 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPT--RAKALPICE---SWRI---P--Y---------------A--D 57 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSS--CTTHHHHHH---HHTC---C--B---------------C--S
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCC--HHHHHHHHH---HcCC---C--c---------------c--C
Confidence 579999999999996 88988887889999998853 322211111 0110 0 0 0 1
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+.+ +.++|+|+.||....-.+.+...+++|. .|++-.|
T Consensus 58 ~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 58 SLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp SHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred cHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 12222 2378999999998888888889999884 5666555
No 90
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.07 E-value=0.00094 Score=66.45 Aligned_cols=34 Identities=32% Similarity=0.510 Sum_probs=31.3
Q ss_pred ceeEEEEccChHHHHHHHHHHcC--------CCceEEEEcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFR--------DDVDVVAVNDP 122 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~--------~~~evvaInd~ 122 (425)
|+||||+|+|.||+.+++.+.++ ++++|++|.|.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 37999999999999999999887 78999999985
No 91
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.06 E-value=0.00074 Score=67.13 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=30.4
Q ss_pred ceeEEEEccChHHHHHHHHHHcCC-------CceEEEEcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRD-------DVDVVAVNDP 122 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~-------~~evvaInd~ 122 (425)
++||||+|+|.||+.+++.+.+++ +++|++|.|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 589999999999999999998764 5899999885
No 92
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.93 E-value=0.00081 Score=64.86 Aligned_cols=79 Identities=22% Similarity=0.298 Sum_probs=57.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
|||+|.|||.||+.++|. + ++|++++-+ +. .| .| | +.. ..|.
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-----~k----------~g------------el---g--v~a--~~d~ 54 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-----RI----------SK------------DI---P--GVV--RLDE 54 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S-CCSEEEEEC-----SS----------CC------------CC---S--SSE--ECSS
T ss_pred ceEEEECcCHHHHHHHhc---C-CcEEEEEEe-----cc----------cc------------cc---C--cee--eCCH
Confidence 599999999999999998 4 799988754 00 01 11 1 111 2356
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEe
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVIS 209 (425)
+++- . +.|+|+||++...-.+...+.|++|...|+.|
T Consensus 55 d~ll--a-~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 55 FQVP--S-DVSTVVECASPEAVKEYSLQILKNPVNYIIIS 91 (253)
T ss_dssp CCCC--T-TCCEEEECSCHHHHHHHHHHHTTSSSEEEECC
T ss_pred HHHh--h-CCCEEEECCCHHHHHHHHHHHHHCCCCEEEcC
Confidence 6665 2 78999999998877788899999998655554
No 93
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.90 E-value=0.0015 Score=64.42 Aligned_cols=96 Identities=21% Similarity=0.174 Sum_probs=66.8
Q ss_pred ceeEEEEccC-hHHHHHHHHHHcC-CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 89 NTKVGINGFG-RIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 89 ~ikVaInGfG-rIGr~vlr~l~~~-~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
++||||+|+| .+|+..++.+.+. ++++|++|.|+ +++....+.+ .||. .. ++.
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~~~----~~---------------~~~- 72 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR--TRSHAEEFAK---MVGN----PA---------------VFD- 72 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS--SHHHHHHHHH---HHSS----CE---------------EES-
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC--CHHHHHHHHH---HhCC----Cc---------------ccC-
Confidence 5799999999 8999999999887 78999999995 5554433221 1111 01 110
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++--|.
T Consensus 73 -~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 115 (340)
T 1zh8_A 73 -SYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKPI 115 (340)
T ss_dssp -CHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred -CHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCCC
Confidence 11111 01236899999999988889999999998 577776653
No 94
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.86 E-value=0.0011 Score=66.08 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=63.2
Q ss_pred ceeEEEEccChHHH-HHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr-~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|+ .+++++. +++++|++|.|+ +++....+.+ .||. .. ++ .
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~--~~~~a~~~a~---~~~~----~~---------------~~--~ 78 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEK--DDALAAEFSA---VYAD----AR---------------RI--A 78 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECS--CHHHHHHHHH---HSSS----CC---------------EE--S
T ss_pred CcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcC--CHHHHHHHHH---HcCC----Cc---------------cc--C
Confidence 68999999999996 4566665 468999999995 5654322221 1110 00 11 0
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++-.|-
T Consensus 79 ~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 121 (361)
T 3u3x_A 79 TAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKPG 121 (361)
T ss_dssp CHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESCS
T ss_pred CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 11111 01236899999999988889999999998 578776663
No 95
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.84 E-value=0.0024 Score=62.82 Aligned_cols=96 Identities=18% Similarity=0.147 Sum_probs=61.7
Q ss_pred ceeEEEEccChHHHHHHHHHHc-------CCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAF-------RDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLI 161 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~-------~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I 161 (425)
++||||+|+|.||+.-++++.. .++++||||.|+ +++....+.+ .||. . .+
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~---~-~~------------- 82 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA--NAGLAEARAG---EFGF---E-KA------------- 82 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHHH---HHTC---S-EE-------------
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC--CHHHHHHHHH---HhCC---C-ee-------------
Confidence 6899999999999987776543 357899999996 3333222211 1111 1 11
Q ss_pred EEEecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 162 KVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 162 ~v~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+ .|.+++ ..+.++|.|+=||....-.+.+..++++|. .|++=-|-
T Consensus 83 --y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKPl 127 (393)
T 4fb5_A 83 --T--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKPM 127 (393)
T ss_dssp --E--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSCS
T ss_pred --c--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccCC
Confidence 1 011111 012368999999999999999999999885 67775553
No 96
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.80 E-value=0.0026 Score=61.79 Aligned_cols=93 Identities=23% Similarity=0.238 Sum_probs=61.7
Q ss_pred eeEEEEccChHHHHH-HHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGINGFGRIGRLV-LRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInGfGrIGr~v-lr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
+||||+|+|.+|+.+ ++.+.+ +++++++|.|+ +++....+.+ .+|. . .. + .+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~--~~~~~~~~~~---~~g~---~-~~---------------~--~~ 53 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMST--SAERGAAYAT---ENGI---G-KS---------------V--TS 53 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECS--CHHHHHHHHH---HTTC---S-CC---------------B--SC
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECC--CHHHHHHHHH---HcCC---C-cc---------------c--CC
Confidence 499999999999997 888877 78999999985 5554322221 1111 0 00 0 01
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+++ ..+.++|+|+.||......+.+...+++| |.|++-.|
T Consensus 54 ~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ekP 94 (332)
T 2glx_A 54 VEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAG-KHVLCEKP 94 (332)
T ss_dssp HHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred HHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCC-CeEEEeCC
Confidence 1111 01136899999999888888888999988 46666444
No 97
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.77 E-value=0.00079 Score=66.13 Aligned_cols=98 Identities=9% Similarity=0.031 Sum_probs=63.4
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCC--ChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFI--DAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~--~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
|++||||+|+|.+|+..++.+ .++++|++|.|+.. ..+..+..++ .||. .... +
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~---~~~~---~~~~---------------~- 56 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAIS---EMNI---KPKK---------------Y- 56 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHH---TTTC---CCEE---------------C-
T ss_pred CceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHH---HcCC---CCcc---------------c-
Confidence 678999999999999888887 67899999998632 1223322221 0110 0011 1
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++--|-
T Consensus 57 -~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 100 (337)
T 3ip3_A 57 -NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERK-IHAFVEKPI 100 (337)
T ss_dssp -SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTT-CEEEECSSS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCC-CcEEEeCCC
Confidence 112211 11246899999999888889999999998 467775553
No 98
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.77 E-value=0.0023 Score=61.98 Aligned_cols=89 Identities=15% Similarity=0.173 Sum_probs=61.7
Q ss_pred ceeEEEEccChHHHHHHHHHHc---CCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 89 NTKVGINGFGRIGRLVLRVAAF---RDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~---~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
++||||+|+|.||+..++.+.. .+++++++|.|.. . + ...+ + + .
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~--~------~--a~~~-----------g--~-------~--- 53 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR--E------L--GSLD-----------E--V-------R--- 53 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS--C------C--CEET-----------T--E-------E---
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECch--H------H--HHHc-----------C--C-------C---
Confidence 4799999999999999998876 5679999998841 0 0 0000 1 0 0
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
..+.+++ ..+.++|+|+.||....-.+.+...+++|. .|++--|.
T Consensus 54 ~~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPl 98 (294)
T 1lc0_A 54 QISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYPM 98 (294)
T ss_dssp BCCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESCS
T ss_pred CCCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCCC
Confidence 0122221 112379999999999888999999999884 67775553
No 99
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.61 E-value=0.0027 Score=65.90 Aligned_cols=109 Identities=17% Similarity=0.264 Sum_probs=63.8
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccC-CccceEEEeCC-CeEE---ECCEEEEE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHG-VFKGTINVVDD-STLE---INGKLIKV 163 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g-~f~~~v~~~~~-~~l~---i~Gk~I~v 163 (425)
++||||+|+|++|+.+++.+.+.++++|++|.|. +++......+ ..|| ++. +...++ ..+. -.| .+.+
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~--~~era~~~a~--~~yG~~~~--~~~~~~~~~i~~a~~~g-~~~v 95 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR--RLPNTFKAIR--TAYGDEEN--AREATTESAMTRAIEAG-KIAV 95 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS--STHHHHHHHH--HHHSSSTT--EEECSSHHHHHHHHHTT-CEEE
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH--HhcCCccc--cccccchhhhhhhhccC-CceE
Confidence 5799999999999999999988889999999995 5554333321 0012 111 110000 0000 000 0112
Q ss_pred EecCCCCCCCCcccCcCEEEEccCcc-cCHHHHHHHHhCCCCEEEE
Q 014424 164 FSKRDPAEIPWGDYGVDYVVESSGVF-TTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 164 ~~~~dp~~i~W~~~gvDiV~esTG~f-~s~e~a~~hl~aGakkVVI 208 (425)
+ .|.+++ ..+.++|+|++||+.. ...+.+..++++|. .|++
T Consensus 96 ~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK-HVv~ 137 (446)
T 3upl_A 96 T--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK-HLVM 137 (446)
T ss_dssp E--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred E--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC-cEEe
Confidence 2 122222 1234799999999864 45678889999885 4443
No 100
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.59 E-value=0.003 Score=61.12 Aligned_cols=98 Identities=21% Similarity=0.294 Sum_probs=60.1
Q ss_pred ceeEEEEcc-ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGf-GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
+|||+|+|. |++|+.+++.+.+.++++|+++-|.. .+.. ...| -|.+.+ .. . .| +.+. .
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~--~~~~---~g~d--~~~~~g---~~---~---~~--v~~~--~ 64 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE--GSSL---LGSD--AGELAG---AG---K---TG--VTVQ--S 64 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT--TCTT---CSCC--TTCSSS---SS---C---CS--CCEE--S
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC--chhh---hhhh--HHHHcC---CC---c---CC--ceec--C
Confidence 369999995 99999999999888889999887741 1100 0000 011110 00 0 01 1222 2
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISa 210 (425)
+.+++- .++|+|+|+|......+.+...+++|.. +|+..
T Consensus 65 dl~~~l---~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigT 103 (273)
T 1dih_A 65 SLDAVK---DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGT 103 (273)
T ss_dssp CSTTTT---TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECC
T ss_pred CHHHHh---cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEEC
Confidence 333321 2689999999766677888888999874 55533
No 101
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.57 E-value=0.0033 Score=65.39 Aligned_cols=99 Identities=13% Similarity=0.134 Sum_probs=67.8
Q ss_pred ceeEEEEcc----ChHHHHHHHHHHcC-CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEE
Q 014424 89 NTKVGINGF----GRIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKV 163 (425)
Q Consensus 89 ~ikVaInGf----GrIGr~vlr~l~~~-~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v 163 (425)
++||||+|+ |.+|+..++.|... ++++|++|.|+ +++....+.+ .||. . .+. +
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~-~-~~~---------------~ 96 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTIE---QLQL-K-HAT---------------G 96 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHHH---HTTC-T-TCE---------------E
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC-C-cce---------------e
Confidence 589999999 99999999999887 88999999995 5544322211 1111 0 000 1
Q ss_pred EecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCC-----CEEEEeCCC
Q 014424 164 FSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA-----KKVVISAPS 212 (425)
Q Consensus 164 ~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGa-----kkVVISaps 212 (425)
+. +.+++ ..+.++|+|+-||....-.+.+..++++|. |.|++--|.
T Consensus 97 ~~--d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPl 147 (479)
T 2nvw_A 97 FD--SLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL 147 (479)
T ss_dssp ES--CHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred eC--CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCC
Confidence 10 11111 012368999999998888899999999994 788886654
No 102
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.57 E-value=0.0037 Score=62.90 Aligned_cols=97 Identities=20% Similarity=0.150 Sum_probs=64.1
Q ss_pred ceeEEEEccCh---HHHHHHHHHHcCCCceEEE-EcCCCCChHHHhHhhh-ccc----ccCCccceEEEeCCCeEEECCE
Q 014424 89 NTKVGINGFGR---IGRLVLRVAAFRDDVDVVA-VNDPFIDAKYMAYMFK-YDS----THGVFKGTINVVDDSTLEINGK 159 (425)
Q Consensus 89 ~ikVaInGfGr---IGr~vlr~l~~~~~~evva-Ind~~~~~~~~ayll~-yDS----~~g~f~~~v~~~~~~~l~i~Gk 159 (425)
++||||+|+|. ||+..++++...++++|++ |.|+ +++....+.+ |.- .|..|. .
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~~~g~~~~~~~~~~~---------~------ 74 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI--DPIRGSAFGEQLGVDSERCYADYL---------S------ 74 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS--SHHHHHHHHHHTTCCGGGBCSSHH---------H------
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC--CHHHHHHHHHHhCCCcceeeCCHH---------H------
Confidence 68999999999 9999999888887899998 8884 5554322221 210 010000 0
Q ss_pred EEEEEecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 160 LIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 160 ~I~v~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+... +... +.++|+|+-||....-.+.+...+++| |.|++--|
T Consensus 75 ---ll~~--~~~~---~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 117 (398)
T 3dty_A 75 ---MFEQ--EARR---ADGIQAVSIATPNGTHYSITKAALEAG-LHVVCEKP 117 (398)
T ss_dssp ---HHHH--HTTC---TTCCSEEEEESCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred ---HHhc--cccc---CCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEeCC
Confidence 0000 0000 025899999999999999999999998 46777544
No 103
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.56 E-value=0.0015 Score=66.58 Aligned_cols=110 Identities=20% Similarity=0.222 Sum_probs=61.1
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCC-ceEEEE-cCCCCChHHHhHhhh-cccccCCccceEEEeCCCe---EE--ECCE
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDD-VDVVAV-NDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDST---LE--INGK 159 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~-~evvaI-nd~~~~~~~~ayll~-yDS~~g~f~~~v~~~~~~~---l~--i~Gk 159 (425)
|+||+|+| ||.||+.+++++.++|+ |+++++ .+ .+.+.+....+ |.- + .+.+.+.+. +. +.+.
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag--~ni~~l~~~~~~f~~---~---~v~v~d~~~~~~l~~~l~~~ 75 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN--RNVKDLADAAKRTNA---K---RAVIADPSLYNDLKEALAGS 75 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES--SCHHHHHHHHHHTTC---S---EEEESCGGGHHHHHHHTTTC
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcC--CCHHHHHHHHHHcCC---c---EEEEcChHHHHHHHHHhccC
Confidence 37999999 59999999999999886 999988 44 35554433332 110 1 111110000 00 0110
Q ss_pred EEEEEe-cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEe
Q 014424 160 LIKVFS-KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 160 ~I~v~~-~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVIS 209 (425)
.+.++. ..+..++- ... +|+|+++++.+.-.+.+-+++++| |+|++.
T Consensus 76 ~~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aG-K~VvlA 123 (388)
T 1r0k_A 76 SVEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKG-KTVALA 123 (388)
T ss_dssp SSEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTT-SEEEEC
T ss_pred CcEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCC-CEEEEe
Confidence 111211 11111110 123 899999994455677777888888 556553
No 104
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.45 E-value=0.0031 Score=61.61 Aligned_cols=93 Identities=23% Similarity=0.330 Sum_probs=63.1
Q ss_pred eeEEEEcc-ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInGf-GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
+||||+|+ |.||+..++++.+. +.++++|.|+..+.. .. .. +|.. .. ++. +
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~---~~---~~---~~~~-~~---------------~~~--~ 55 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVG---LV---DS---FFPE-AE---------------FFT--E 55 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG---GG---GG---TCTT-CE---------------EES--C
T ss_pred eEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHH---HH---Hh---hCCC-Cc---------------eeC--C
Confidence 69999998 89999999999887 589999999632221 11 11 1111 11 110 1
Q ss_pred CCCCC-----C--cccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 169 PAEIP-----W--GDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 169 p~~i~-----W--~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+++. | .+.++|+|+-||....-.+.+..++++| |.|++--|
T Consensus 56 ~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 104 (312)
T 3o9z_A 56 PEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKP 104 (312)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred HHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECC
Confidence 11110 0 1247999999999999999999999999 57777555
No 105
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.43 E-value=0.0059 Score=61.98 Aligned_cols=97 Identities=22% Similarity=0.248 Sum_probs=63.7
Q ss_pred ceeEEEEccCh---HHHHHHHHHHcCCCceEEE-EcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEE
Q 014424 89 NTKVGINGFGR---IGRLVLRVAAFRDDVDVVA-VNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (425)
Q Consensus 89 ~ikVaInGfGr---IGr~vlr~l~~~~~~evva-Ind~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~ 164 (425)
++||||+|+|+ ||+..++++...++++|++ |.|+ +++....+.+ .||.-. ..+ +
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~---~~g~~~--~~~---------------~ 94 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS--TPEKAEASGR---ELGLDP--SRV---------------Y 94 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS--SHHHHHHHHH---HHTCCG--GGB---------------C
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC--CHHHHHHHHH---HcCCCc--ccc---------------c
Confidence 68999999999 9999999888888899997 8885 5554322221 111100 000 0
Q ss_pred ecCCCCCCCCcc-----cCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 165 SKRDPAEIPWGD-----YGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 165 ~~~dp~~i~W~~-----~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+.+++ ..+ .++|+|+-||....-.+.+..++++| |.|++-.|
T Consensus 95 --~~~~~l-l~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 142 (417)
T 3v5n_A 95 --SDFKEM-AIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRG-IHVICDKP 142 (417)
T ss_dssp --SCHHHH-HHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTT-CEEEEESS
T ss_pred --CCHHHH-HhcccccCCCCcEEEECCCcHHHHHHHHHHHhCC-CeEEEECC
Confidence 011111 001 25899999999998899999999988 56777666
No 106
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.31 E-value=0.0066 Score=59.29 Aligned_cols=95 Identities=11% Similarity=0.107 Sum_probs=60.6
Q ss_pred ceeEEEEccChHHH-HHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr-~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+|.+|. .+++.+. +++++|++|.|+ +++....+.+ .|| + ... + .
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~--~~~~~~~~a~---~~~---~-~~~---------------~--~ 56 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFES--DSDNRAKFTS---LFP---S-VPF---------------A--A 56 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECS--CTTSCHHHHH---HST---T-CCB---------------C--S
T ss_pred ccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCC--CHHHHHHHHH---hcC---C-Ccc---------------c--C
Confidence 57999999999996 6777775 457999999985 3322111111 111 0 000 0 0
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
+.+++ ..+.++|+|+-||....-.+.+...+++| |.|++--|.
T Consensus 57 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP~ 99 (336)
T 2p2s_A 57 SAEQL-ITDASIDLIACAVIPCDRAELALRTLDAG-KDFFTAKPP 99 (336)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSC
T ss_pred CHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCC-CcEEEeCCC
Confidence 11111 01236899999999988899999999988 467775553
No 107
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.30 E-value=0.0043 Score=60.79 Aligned_cols=93 Identities=18% Similarity=0.166 Sum_probs=63.4
Q ss_pred eeEEEEcc-ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInGf-GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
+||||+|+ |.||+..++++.+. +.++++|.|+..+.. . + +. +|... . ++. +
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~---~-~--~~---~~~~~-~---------------~~~--~ 55 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVG---I-I--DS---ISPQS-E---------------FFT--E 55 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG---G-G--GG---TCTTC-E---------------EES--S
T ss_pred eEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHH---H-H--Hh---hCCCC-c---------------EEC--C
Confidence 69999999 89999999999887 689999999632211 1 1 11 11111 1 111 1
Q ss_pred CCCCC--------CcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 169 PAEIP--------WGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 169 p~~i~--------W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+++- ..+.++|+|+-||....-.+.+..++++| |.|++--|
T Consensus 56 ~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 105 (318)
T 3oa2_A 56 FEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKP 105 (318)
T ss_dssp HHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred HHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECC
Confidence 11110 01347999999999999999999999998 57888655
No 108
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.14 E-value=0.0027 Score=64.95 Aligned_cols=99 Identities=11% Similarity=0.100 Sum_probs=67.9
Q ss_pred ceeEEEEcc----ChHHHHHHHHHHcC-CCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEE
Q 014424 89 NTKVGINGF----GRIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKV 163 (425)
Q Consensus 89 ~ikVaInGf----GrIGr~vlr~l~~~-~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v 163 (425)
++||||+|+ |.+|+..++.|.+. ++++||+|.|+ +.+....+.+ .||. . .+. +
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~g~-~-~~~---------------~ 77 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATIQ---RLKL-S-NAT---------------A 77 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HTTC-T-TCE---------------E
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC-C-cce---------------e
Confidence 489999999 99999999999988 88999999995 5554322221 1111 0 001 1
Q ss_pred EecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCC-----CEEEEeCCC
Q 014424 164 FSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA-----KKVVISAPS 212 (425)
Q Consensus 164 ~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGa-----kkVVISaps 212 (425)
+. +.+++ ..+.++|+|+-||....-.+.+..++++|. |.|++--|.
T Consensus 78 ~~--~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~ 128 (438)
T 3btv_A 78 FP--TLESF-ASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWAL 128 (438)
T ss_dssp ES--SHHHH-HHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSC
T ss_pred eC--CHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcc
Confidence 11 12221 012368999999998888899999999994 788886553
No 109
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.78 E-value=0.0069 Score=60.25 Aligned_cols=93 Identities=20% Similarity=0.180 Sum_probs=57.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
+|||.|+|.|.||+.+++.|.++.++.+ .|. +.+.+..+.+ +...+.+ + ..|
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~---~~~--~~~~~~~~~~-------~~~~~~~--------d--------~~d 67 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYI---GDV--NNENLEKVKE-------FATPLKV--------D--------ASN 67 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEE---EES--CHHHHHHHTT-------TSEEEEC--------C--------TTC
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEE---EEc--CHHHHHHHhc-------cCCcEEE--------e--------cCC
Confidence 3599999999999999999977654443 332 3343322211 1111111 0 112
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEe
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVIS 209 (425)
++.+.=.-.++|+|+.|+|.+....-+++.+++|+--+.+|
T Consensus 68 ~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 68 FDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp HHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCcceEeee
Confidence 22111001378999999999988888999999998555554
No 110
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.61 E-value=0.091 Score=49.05 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=28.3
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.|++||.|.|.|.||+.+++.|.+++ .+|+++..
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 36 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQG-WRIIGTSR 36 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGT-CEEEEEES
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCC-CEEEEEEc
Confidence 35579999999999999999999884 78888865
No 111
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=95.42 E-value=0.05 Score=55.07 Aligned_cols=109 Identities=14% Similarity=0.192 Sum_probs=62.1
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhh-cccccCCccceEEEeCCCeE--EECCEEEEEEe
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDSTL--EINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~-yDS~~g~f~~~v~~~~~~~l--~i~Gk~I~v~~ 165 (425)
.||+|+| ||.||+..++++.++++|+|+++.. ..+.+.+....+ |.. + .+.+.+.... .+.. . +..
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a-~~n~~~l~~q~~~f~p---~---~v~v~~~~~~~~~l~~-~--~~G 73 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISF-HSNLELAFKIVKEFNV---K---NVAITGDVEFEDSSIN-V--WKG 73 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEE-SSCHHHHHHHHHHHTC---C---EEEECSSCCCCCSSSE-E--EES
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEc-cCCHHHHHHHHHHcCC---C---EEEEccHHHHHHHHHH-H--ccC
Confidence 5899999 8999999999998887799999943 246666554432 221 1 1111100000 0000 0 110
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeC
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISa 210 (425)
+....++- ...++|+|+.++-.+.-.+-.-+++++| |+|.+.+
T Consensus 74 ~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaLAN 116 (376)
T 3a06_A 74 SHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCLAN 116 (376)
T ss_dssp TTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEECC
T ss_pred HHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEeC
Confidence 00000110 1136899999996666666666778888 5666633
No 112
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.42 E-value=0.013 Score=54.81 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=62.7
Q ss_pred eeEEEEccChHHHHHHHHH-HcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGINGFGRIGRLVLRVA-AFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l-~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
.||+|+|.|.+|+.+++.+ .+. .+++|++-|. +++.. |+ .++|.+ +....+
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~--dp~k~----------g~-------------~i~gv~--V~~~~d 132 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV--DPEKV----------GR-------------PVRGGV--IEHVDL 132 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES--CTTTT----------TC-------------EETTEE--EEEGGG
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC--CHHHH----------hh-------------hhcCCe--eecHHh
Confidence 5999999999999999863 334 7999999873 33211 11 123322 322223
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+++ ..+ ++|.|+-|+......+.+...+++|.+.++.-.|-
T Consensus 133 l~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 133 LPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp HHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 2222 134 79999999988877788888889998877776665
No 113
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.28 E-value=0.013 Score=58.21 Aligned_cols=95 Identities=16% Similarity=0.153 Sum_probs=60.3
Q ss_pred ceeEEEEc-cChHHHH-HH----HHHHcCCCceEE---------EEcCCCCChHHHhHhhhcccccCCccceEEEeCCCe
Q 014424 89 NTKVGING-FGRIGRL-VL----RVAAFRDDVDVV---------AVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDST 153 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~-vl----r~l~~~~~~evv---------aInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~ 153 (425)
++||||+| +|.+|+. .+ +++.+.+.++++ +|.|. +++....+.+ .||. . .
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~--~~~~a~~~a~---~~~~---~-~------ 70 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR--SAEKVEALAK---RFNI---A-R------ 70 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS--SSHHHHHHHH---HTTC---C-C------
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC--CHHHHHHHHH---HhCC---C-c------
Confidence 68999999 9999997 66 777766655543 67774 4444322221 1111 0 0
Q ss_pred EEECCEEEEEEecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 154 LEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 154 l~i~Gk~I~v~~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
++ .+.+++ ..+.++|+|+-||+...-.+.+..++++| |.|++=-|
T Consensus 71 ---------~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP 115 (383)
T 3oqb_A 71 ---------WT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAG-KHVYCEKP 115 (383)
T ss_dssp ---------EE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSC
T ss_pred ---------cc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCC
Confidence 11 011111 01236899999999999999999999998 56776444
No 114
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.24 E-value=0.033 Score=52.13 Aligned_cols=93 Identities=16% Similarity=0.211 Sum_probs=59.0
Q ss_pred eeEEEEccChHHHHHHHH-HHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGINGFGRIGRLVLRV-AAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~-l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
+||+|+|.|.+|+.+++. ...++.+++|++-|. +++.. |+ .++|.+ +....+
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k~----------g~-------------~i~gv~--V~~~~d 138 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESKI----------GT-------------EVGGVP--VYNLDD 138 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTTT----------TC-------------EETTEE--EEEGGG
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHHH----------Hh-------------HhcCCe--eechhh
Confidence 489999999999999994 334457999999883 33211 11 123322 222222
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+++- . .. |+|+.|+......+.+...+++|.+.++.-+|-
T Consensus 139 l~eli-~-~~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 139 LEQHV-K-DE-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp HHHHC-S-SC-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHH-H-hC-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 22221 1 23 999999988777788888899999888877775
No 115
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.96 E-value=0.13 Score=50.24 Aligned_cols=42 Identities=12% Similarity=0.085 Sum_probs=31.0
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCc--eEEEEcCCCCChHHHhHh
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDV--DVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~--evvaInd~~~~~~~~ayl 132 (425)
+|.+||+|+|+|.||+.+.+.|.+.+ + +|++.+. +.+.+..+
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~dr---~~~~~~~a 74 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYDI---NPESISKA 74 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTT-CCSEEEEECS---CHHHHHHH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEEEEC---CHHHHHHH
Confidence 45579999999999999999998875 4 6665543 45554443
No 116
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.84 E-value=0.022 Score=52.32 Aligned_cols=36 Identities=22% Similarity=0.188 Sum_probs=28.5
Q ss_pred CCCceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 86 SDGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 86 ~~m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|+++|.|.| +|.||+.+++.|.+++..+|+++..
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc
Confidence 35567899999 9999999999999886478776654
No 117
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.75 E-value=0.092 Score=52.85 Aligned_cols=91 Identities=15% Similarity=0.199 Sum_probs=59.0
Q ss_pred ceeEEEEccChHHHHHHHHHHcCC-CceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRD-DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~-~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
++||||+|+| .|+.-++++.+.+ .++||+|.|+ +.+....+-+ .||. +.+ .
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~--~~~~a~~~a~---~~gv--------------------~~~--~ 58 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ--GSARSRELAH---AFGI--------------------PLY--T 58 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC--SSHHHHHHHH---HTTC--------------------CEE--S
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC--CHHHHHHHHH---HhCC--------------------CEE--C
Confidence 4799999999 6999999887765 5999999995 3433212111 1111 112 1
Q ss_pred CCCCCCCcccCcCEEEEccCcccC----HHHHHHHHhCCCCEEEEeCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTT----IAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s----~e~a~~hl~aGakkVVISap 211 (425)
+.+++. .++|+|+=||....- .+.+.+.|++|. .|++=-|
T Consensus 59 ~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKP 102 (372)
T 4gmf_A 59 SPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHP 102 (372)
T ss_dssp SGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESC
T ss_pred CHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecC
Confidence 333332 258988889876654 688889999885 6777555
No 118
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.73 E-value=0.062 Score=48.38 Aligned_cols=31 Identities=32% Similarity=0.380 Sum_probs=27.3
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEc
Confidence 5999999 9999999999999885 78887765
No 119
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.56 E-value=0.02 Score=53.61 Aligned_cols=95 Identities=22% Similarity=0.269 Sum_probs=63.4
Q ss_pred eeEEEEccChHHHHHHHHHH-cCCCceEEEEcCCCCChH-HHhHhhhcccccCC-ccceEEEeCCCeEEECCEEEEEEec
Q 014424 90 TKVGINGFGRIGRLVLRVAA-FRDDVDVVAVNDPFIDAK-YMAYMFKYDSTHGV-FKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~-~~~~~evvaInd~~~~~~-~~ayll~yDS~~g~-f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
.||+|+|.|..|+.+++.+. ++.++++|++-|. +++ . .|+ . ++| ++|..-
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~k----------iG~~~-------------i~G--vpV~~~ 137 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSNDL----------VGKTT-------------EDG--IPVYGI 137 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTSTT----------TTCBC-------------TTC--CBEEEG
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchhc----------cCcee-------------ECC--eEEeCH
Confidence 59999999999999998743 3347999998773 332 1 122 1 122 123321
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps 212 (425)
.+.+++ -.+.++|+++-|+......+.+....++|.|-+.--+|-
T Consensus 138 ~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 138 STINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp GGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 121111 123589999999988877788888889999988887775
No 120
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.45 E-value=0.029 Score=56.32 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=30.4
Q ss_pred ceeEEEEccChHHHHHHHHHHcCC---CceEEEEcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRD---DVDVVAVNDP 122 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~---~~evvaInd~ 122 (425)
++||||+|+|.||+.+++.+.+++ +++|++|.|.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 479999999999999999998875 6899999883
No 121
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.22 E-value=0.17 Score=45.45 Aligned_cols=30 Identities=30% Similarity=0.433 Sum_probs=26.7
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGAR 32 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 899999 9999999999999885 78887765
No 122
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.14 E-value=0.048 Score=51.98 Aligned_cols=99 Identities=14% Similarity=0.030 Sum_probs=55.9
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCC-ChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFI-DAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~-~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
|+.+|.|.| +|.||+.+++.|.+++ .+|+++..... ..+.+..+ .-. .++. .. ..
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~l-~~~--------~v~~------v~-------~D 66 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDEF-QSL--------GAII------VK-------GE 66 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECTTCSCHHHHHHH-HHT--------TCEE------EE-------CC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCC-CcEEEEECCCCchhhHHHHh-hcC--------CCEE------EE-------ec
Confidence 445899999 9999999999999885 67777754211 11111111 100 0111 00 00
Q ss_pred cCCCCCCCCcccCcCEEEEccCcc---cCHHHHHHHHhCC-CCEEEEe
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVF---TTIAKASAHMKGG-AKKVVIS 209 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f---~s~e~a~~hl~aG-akkVVIS 209 (425)
-.|++.+.-.-.++|+||.++|.. .....+.+..++| .+++|.|
T Consensus 67 l~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S 114 (318)
T 2r6j_A 67 LDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPS 114 (318)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECS
T ss_pred CCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEee
Confidence 112222211123799999999743 3445556666778 8888754
No 123
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.00 E-value=0.055 Score=52.40 Aligned_cols=101 Identities=18% Similarity=0.093 Sum_probs=57.3
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCC-CChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPF-IDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~-~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
++||.|.| +|.||+.+++.|.+++ .+|+++.... .+++....+-+... ..+.. ... .-
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~l~~------~~v~~------~~~-------Dl 69 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKIFKALED------KGAII------VYG-------LI 69 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHHHHHH------TTCEE------EEC-------CT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHHHHHHHh------CCcEE------EEe-------ec
Confidence 35899999 8999999999999885 7777776531 12333221111110 00111 000 01
Q ss_pred CCCCCCCCccc--CcCEEEEccCcc---cCHHHHHHHHhCC-CCEEEEe
Q 014424 167 RDPAEIPWGDY--GVDYVVESSGVF---TTIAKASAHMKGG-AKKVVIS 209 (425)
Q Consensus 167 ~dp~~i~W~~~--gvDiV~esTG~f---~s~e~a~~hl~aG-akkVVIS 209 (425)
.|++.+.-.-. ++|+||.++|.. .+...+.+..++| .|++|.|
T Consensus 70 ~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S 118 (346)
T 3i6i_A 70 NEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPS 118 (346)
T ss_dssp TCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECS
T ss_pred CCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeec
Confidence 12222221112 899999999763 2345556666778 9998864
No 124
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.99 E-value=0.1 Score=49.56 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=28.0
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|++||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTR 34 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 557999999 9999999999999885 68887765
No 125
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.86 E-value=0.1 Score=52.72 Aligned_cols=154 Identities=12% Similarity=0.135 Sum_probs=81.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEcCCCCChHHHhHhhh-cccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd~~~~~~~~ayll~-yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
+||+|.|.|.||+.+++.|.+++++ ..|.+.+. +.+....+.+ +.. +....+.. +.+ ...
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r--~~~~~~~la~~l~~---~~~~~~~~-----~~~--------D~~ 63 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR--TLSKCQEIAQSIKA---KGYGEIDI-----TTV--------DAD 63 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES--CHHHHHHHHHHHHH---TTCCCCEE-----EEC--------CTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC--CHHHHHHHHHHhhh---hcCCceEE-----EEe--------cCC
Confidence 5999999999999999999988765 33445553 3443322221 110 00000110 000 001
Q ss_pred CCCCCC--CcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCC-CCCCcEEeecCccccC-----CCCcEEecCCc
Q 014424 168 DPAEIP--WGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS-ADAPMFVVGVNEKTYK-----PNMNIVSNASC 239 (425)
Q Consensus 168 dp~~i~--W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps-~Dvp~vV~gVN~~~~~-----~~~~IISnaSC 239 (425)
+++++. ..+.++|+||.|+|.+.....+...+++|...++++.-. ++...+.+..- ..+. ....++.+.+|
T Consensus 64 d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~-~~l~~~a~~aG~~~i~g~G~ 142 (405)
T 4ina_A 64 SIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQ-WAFHDRYKEKGVMALLGSGF 142 (405)
T ss_dssp CHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHH-HTTHHHHHHHTCEEEECCBT
T ss_pred CHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHH-HHHHHHHHHhCCEEEEcCCC
Confidence 111111 011248999999999888788888899998655442211 11111111110 1121 13467888888
Q ss_pred hhhhHHhHHHHHHhh-cC-eeEEEE
Q 014424 240 TTNCLAPLAKVVHEE-FG-ILEGLM 262 (425)
Q Consensus 240 TTn~Lap~lk~L~d~-fG-I~~~~~ 262 (425)
........+..+.++ |+ |+++.+
T Consensus 143 ~PG~~~l~a~~~~~~~~~~i~~i~i 167 (405)
T 4ina_A 143 DPGVTNVFCAYAQKHYFDEIHEIDI 167 (405)
T ss_dssp TTBHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CccHHHHHHHHHHHhccCcccEEEE
Confidence 766655555555554 55 555554
No 126
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=93.68 E-value=0.032 Score=52.37 Aligned_cols=95 Identities=13% Similarity=0.127 Sum_probs=55.3
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
|||.|.| +|.||+.+++.|.+++..+|+++... ++....+. ...++. . ...-.|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~---~~~~~~~~---------~~~v~~------~-------~~D~~d 55 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRN---VEKVPDDW---------RGKVSV------R-------QLDYFN 55 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS---GGGSCGGG---------BTTBEE------E-------ECCTTC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC---HHHHHHhh---------hCCCEE------E-------EcCCCC
Confidence 3899999 99999999999887755788877652 22111110 000111 0 001112
Q ss_pred CCCCCCcccCcCEEEEccCcccC--------HHHHHHHHhCCCCEEEEe
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTT--------IAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s--------~e~a~~hl~aGakkVVIS 209 (425)
++.+.-.-.++|+||.++|.... ...+....++|.+++|..
T Consensus 56 ~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~ 104 (289)
T 3e48_A 56 QESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFI 104 (289)
T ss_dssp HHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEE
Confidence 32222112489999999986432 334556667898888763
No 127
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.65 E-value=0.17 Score=43.50 Aligned_cols=32 Identities=31% Similarity=0.480 Sum_probs=26.9
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
..+|.|.|+|.+|+.+++.|...+ .+|+.+..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG-HSVVVVDK 50 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 359999999999999999998875 68777754
No 128
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=93.65 E-value=0.39 Score=41.37 Aligned_cols=84 Identities=26% Similarity=0.402 Sum_probs=58.0
Q ss_pred ceeEEEEcc----ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEE
Q 014424 89 NTKVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (425)
Q Consensus 89 ~ikVaInGf----GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~ 164 (425)
+.+|||+|. |.+|+.+++.|.+.+ ++|..+|-. ++ + +.|. +++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vnp~------------~~--------~----------i~G~--~~~ 60 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPN------------YD--------E----------IEGL--KCY 60 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT------------CS--------E----------ETTE--ECB
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeCCC------------CC--------e----------ECCe--eec
Confidence 468999998 999999999998874 787766641 01 1 1221 122
Q ss_pred ecCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeC
Q 014424 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210 (425)
Q Consensus 165 ~~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISa 210 (425)
.++++++ ..+|+|+-++......+-+...++.|.+.+++..
T Consensus 61 --~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 61 --RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp --SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred --CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 2455554 3699999999865556666667788999888743
No 129
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=93.55 E-value=0.22 Score=51.88 Aligned_cols=103 Identities=15% Similarity=0.246 Sum_probs=68.4
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCC--------CChHHHhHhhhccccc-CCccceEEEeCCCeEEECCE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF--------IDAKYMAYMFKYDSTH-GVFKGTINVVDDSTLEINGK 159 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~--------~~~~~~ayll~yDS~~-g~f~~~v~~~~~~~l~i~Gk 159 (425)
-.+|+|-|||-||+.+++.|.+. ...||+|.|.. .+.+.+..|+++...+ |+...-.+ .+. +.+
T Consensus 252 g~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~-----~~~-~a~ 324 (470)
T 2bma_A 252 KQTAVVSGSGNVALYCVQKLLHL-NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLN-----HSS-TAK 324 (470)
T ss_dssp GCEEEEECSSHHHHHHHHHHHHT-TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGG-----TCS-SCE
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHh-----hcC-CcE
Confidence 35899999999999999999887 48999998842 3666666777655433 22211100 000 111
Q ss_pred EEEEEecCCCCCCCCcccCcCEEEEcc-CcccCHHHHHHHHhCCCCEE
Q 014424 160 LIKVFSKRDPAEIPWGDYGVDYVVESS-GVFTTIAKASAHMKGGAKKV 206 (425)
Q Consensus 160 ~I~v~~~~dp~~i~W~~~gvDiV~esT-G~f~s~e~a~~hl~aGakkV 206 (425)
.. +++++ | ...+||.+-|+ +.-++.+.++..++.+||.|
T Consensus 325 ---~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V 364 (470)
T 2bma_A 325 ---YF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCILV 364 (470)
T ss_dssp ---EC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCCEE
T ss_pred ---Ee---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcEEE
Confidence 11 22333 7 47899999998 66778888988888888643
No 130
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=93.41 E-value=1.8 Score=40.95 Aligned_cols=154 Identities=19% Similarity=0.168 Sum_probs=89.6
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
||-.|+| +||+||.+.+++ +.++++||+.-|.. + .
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~------------~----------------~--------------- 48 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVN------------G----------------V--------------- 48 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETT------------E----------------E---------------
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCC------------C----------------c---------------
Confidence 4889999 799999998876 44579998775520 0 0
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCCCCCCCcEEeecCcccc------CCCCcEEecCCch--
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTY------KPNMNIVSNASCT-- 240 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISaps~Dvp~vV~gVN~~~~------~~~~~IISnaSCT-- 240 (425)
+++ .++|+|+|-|-.....+.++..++.|..-|+=+. |.+++.+ .....++-.||=+
T Consensus 49 -~~l----~~~DVvIDFT~P~a~~~~~~~~~~~g~~~ViGTT----------G~~~~~~~~l~~~a~~~~vv~apNfSlG 113 (228)
T 1vm6_A 49 -EEL----DSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTT----------ALKEEHLQMLRELSKEVPVVQAYNFSIG 113 (228)
T ss_dssp -EEC----SCCSEEEECSCGGGHHHHHHHHHHHTCEEEECCC----------SCCHHHHHHHHHHTTTSEEEECSCCCHH
T ss_pred -ccc----cCCCEEEECCCHHHHHHHHHHHHHcCCCEEEeCC----------CCCHHHHHHHHHHHhhCCEEEeccccHH
Confidence 011 1479999988777777778888888875433221 2332221 1123455555443
Q ss_pred hhhHHhHHHHHHhhcCeeEEEEEeeeecccccccccCCCCCcccCcccCcceeecCCCChhHHHHhhcCCCCCceeEEEE
Q 014424 241 TNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAF 320 (425)
Q Consensus 241 Tn~Lap~lk~L~d~fGI~~~~~TTvhAvt~~q~~vDg~~~kd~r~gr~aa~NIIP~~tGaakav~kVLPeL~gkit~~av 320 (425)
.|-|.-+++.+-+.|.==.+.+.-.|- . .=+|.|+ |.|..+.+.++ ..+--.++
T Consensus 114 vnll~~l~~~aA~~l~~ydiEIiE~HH---~-~K~DAPS-------------------GTAl~lae~i~---~~I~i~sv 167 (228)
T 1vm6_A 114 INVLKRFLSELVKVLEDWDVEIVETHH---R-FKKDAPS-------------------GTAILLESALG---KSVPIHSL 167 (228)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEEEC---T-TCCCSSC-------------------HHHHHHHHHTT---SCCCEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEcCC---C-CCCCCCC-------------------HHHHHHHHhcc---cCCCEEEE
Confidence 444444555544444201233444551 1 1133333 66777777774 34677889
Q ss_pred Eeeeccce
Q 014424 321 RVPTPNVS 328 (425)
Q Consensus 321 RVPv~~gs 328 (425)
|.|-.-|+
T Consensus 168 R~g~ivg~ 175 (228)
T 1vm6_A 168 RVGGVPGD 175 (228)
T ss_dssp ECTTCCCE
T ss_pred ECCCCcEE
Confidence 98866665
No 131
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=93.18 E-value=0.14 Score=52.53 Aligned_cols=34 Identities=21% Similarity=0.435 Sum_probs=30.0
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF 123 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~ 123 (425)
..||+|-|||-||+.+++.|.+.. ..||+|.|..
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~G-akvVavsD~~ 245 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQG-GKVCAIAEWD 245 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHTT-CCEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CEEEEEEecC
Confidence 358999999999999999998874 8999999963
No 132
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.16 E-value=0.41 Score=45.27 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=25.2
Q ss_pred ceeEEEEccChHHHHHHHHHHcCC-CceEEEEc
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRD-DVDVVAVN 120 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~-~~evvaIn 120 (425)
++||+|+|+|.+|+.+.+.|.+.+ ..+|+..+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d 38 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYN 38 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEc
Confidence 359999999999999999887653 46765443
No 133
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.09 E-value=0.17 Score=47.66 Aligned_cols=100 Identities=17% Similarity=0.153 Sum_probs=56.5
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCC--hHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFID--AKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~--~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
++|.|.| +|.||+.+++.|.+++ .+|+++...... ++....+..... ..++. +.+ .-
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~------~~~~~-------~~~------D~ 64 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQ------LGAKL-------IEA------SL 64 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHT------TTCEE-------ECC------CS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCcccchhHHHHHHHHHh------CCeEE-------EeC------CC
Confidence 4899999 9999999999999885 788777552111 332211111100 00111 100 01
Q ss_pred CCCCCCCCcccCcCEEEEccCcc-------cCHHHHHHHHhCC-CCEEEEe
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVF-------TTIAKASAHMKGG-AKKVVIS 209 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f-------~s~e~a~~hl~aG-akkVVIS 209 (425)
.|++.+.-.-.++|+||.++|.. .....+.+..++| .|++|.|
T Consensus 65 ~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S 115 (313)
T 1qyd_A 65 DDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPS 115 (313)
T ss_dssp SCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECS
T ss_pred CCHHHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEec
Confidence 12222211123799999999754 1344556666788 9998864
No 134
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.99 E-value=0.29 Score=45.72 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=28.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
+||+|+|+|.+|+.+.+.|...+ +++|.+-|. +.+..
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g-~~~v~~~~~--~~~~~ 47 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG-FRIVQVYSR--TEESA 47 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CCEEEEECS--SHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC-CeEEEEEeC--CHHHH
Confidence 49999999999999999988764 675666663 45544
No 135
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=92.97 E-value=0.37 Score=45.73 Aligned_cols=100 Identities=17% Similarity=0.132 Sum_probs=56.3
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCC-C--ChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPF-I--DAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~-~--~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
++|.|.| +|.||+.+++.|.+++ .+|+++.... . +++....+-.... ..++. .. ..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~l~~~~~------~~v~~------v~-------~D 64 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLTPDSTPSSVQLREEFRS------MGVTI------IE-------GE 64 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCCTTCCHHHHHHHHHHHH------TTCEE------EE-------CC
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcccccChHHHHHHHHhhc------CCcEE------EE-------ec
Confidence 5899999 9999999999999875 7777775421 0 1222211110000 00111 00 00
Q ss_pred cCCCCCCCCcccCcCEEEEccCcc---cCHHHHHHHHhCC-CCEEEEe
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVF---TTIAKASAHMKGG-AKKVVIS 209 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f---~s~e~a~~hl~aG-akkVVIS 209 (425)
-.|++.+.-.-.++|+||.++|.. .....+.+..++| .+++|.|
T Consensus 65 ~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S 112 (321)
T 3c1o_A 65 MEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPS 112 (321)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECS
T ss_pred CCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEecc
Confidence 112222211123799999999753 3455666667778 9998753
No 136
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.84 E-value=0.18 Score=44.24 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=26.8
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 4899999 8999999999999885 78877754
No 137
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.82 E-value=0.42 Score=42.32 Aligned_cols=31 Identities=39% Similarity=0.528 Sum_probs=27.2
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 3899999 9999999999999885 78888765
No 138
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.70 E-value=0.14 Score=47.83 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=27.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+||.|.|.|.||+.+++.|.+++ .+|+++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG-HEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 58999999999999999999884 68887765
No 139
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.28 E-value=0.25 Score=41.88 Aligned_cols=41 Identities=20% Similarity=0.300 Sum_probs=32.0
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhH
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ay 131 (425)
.|+-+|.|.|+|++|+.+++.|.+++ .+++.|.. +++....
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~---~~~~~~~ 45 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASD-IPLVVIET---SRTRVDE 45 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTT-CCEEEEES---CHHHHHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEEC---CHHHHHH
Confidence 35568999999999999999998874 78887865 4555433
No 140
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.23 E-value=0.97 Score=40.89 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=27.6
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG-HEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC-CeEEEEEC
Confidence 45999999 8999999999999885 68887765
No 141
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=91.90 E-value=0.36 Score=49.52 Aligned_cols=92 Identities=24% Similarity=0.318 Sum_probs=56.4
Q ss_pred ceeEEEEccChHHHHHHHHHHc-CCCceEEEEcCCC--------CChHHHhHhhhcccccCCccceEEEeCCCeEEECCE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAF-RDDVDVVAVNDPF--------IDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGK 159 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~-~~~~evvaInd~~--------~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk 159 (425)
..+|+|.|||-||+.+++.|.+ . ...||+|.|.. .+++.+..+ -..+|+...- .+ .+
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~-GakvVavsD~~G~i~dp~Gld~~~l~~~---~~~~g~l~~y----~~------a~ 274 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQEL-GSKVVAVSDSRGGIYNPEGFDVEELIRY---KKEHGTVVTY----PK------GE 274 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECSSCEEECTTCCCHHHHHHH---HHHSSCSTTC----SS------SE
T ss_pred CCEEEEECCcHHHHHHHHHHHHhc-CCEEEEEEeCCCeEECCCCCCHHHHHHH---HHhhCCcccC----CC------ce
Confidence 3599999999999999999988 5 59999998852 145443332 2223332110 00 11
Q ss_pred EEEEEecCCCCCCCCcccCcCEEEEcc-CcccCHHHHHHHHhCCCCE
Q 014424 160 LIKVFSKRDPAEIPWGDYGVDYVVESS-GVFTTIAKASAHMKGGAKK 205 (425)
Q Consensus 160 ~I~v~~~~dp~~i~W~~~gvDiV~esT-G~f~s~e~a~~hl~aGakk 205 (425)
.+ +++++ |. ..+|+++.|+ +...+.+.+.. -+||.
T Consensus 275 ~~------~~~ei-l~-~~~DIliP~A~~n~i~~~~a~~---l~ak~ 310 (415)
T 2tmg_A 275 RI------TNEEL-LE-LDVDILVPAALEGAIHAGNAER---IKAKA 310 (415)
T ss_dssp EE------CHHHH-TT-CSCSEEEECSSTTSBCHHHHTT---CCCSE
T ss_pred Ec------Cchhh-hc-CCCcEEEecCCcCccCcccHHH---cCCeE
Confidence 11 12222 54 5899999998 66667766543 25653
No 142
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=91.78 E-value=0.48 Score=49.12 Aligned_cols=103 Identities=14% Similarity=0.237 Sum_probs=64.2
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCC--------CChHHHhHhhhcccccC-CccceEEEeCCCeEEECCE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF--------IDAKYMAYMFKYDSTHG-VFKGTINVVDDSTLEINGK 159 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~--------~~~~~~ayll~yDS~~g-~f~~~v~~~~~~~l~i~Gk 159 (425)
-.+|+|-|||-||+.+++.|.+.. ..||+|.|.. .|.+.+..+.++...++ +....+... .+.+
T Consensus 239 g~~VaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~------~~a~ 311 (456)
T 3r3j_A 239 NKKCLVSGSGNVAQYLVEKLIEKG-AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYS------KTAK 311 (456)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHT-CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTC------SSCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcC------CCce
Confidence 358999999999999999988764 6788888742 45666655544443222 111000000 0111
Q ss_pred EEEEEecCCCCCCCCcccCcCEEEEcc-CcccCHHHHHHHHhCCCCEE
Q 014424 160 LIKVFSKRDPAEIPWGDYGVDYVVESS-GVFTTIAKASAHMKGGAKKV 206 (425)
Q Consensus 160 ~I~v~~~~dp~~i~W~~~gvDiV~esT-G~f~s~e~a~~hl~aGakkV 206 (425)
.. +++++ |. ..+||.+=|+ +.-++.+.++..++.+||-|
T Consensus 312 ---~v---~~~~i-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V 351 (456)
T 3r3j_A 312 ---YF---ENQKP-WN-IPCDIAFPCATQNEINENDADLFIQNKCKMI 351 (456)
T ss_dssp ---EE---CSCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHHTCCEE
T ss_pred ---Ee---CCccc-cc-cCccEEEeCCCccchhhHHHHHHHhcCCeEE
Confidence 11 23333 64 6899999987 66788888888777778543
No 143
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=91.71 E-value=0.27 Score=47.62 Aligned_cols=86 Identities=23% Similarity=0.185 Sum_probs=57.9
Q ss_pred eeEEEEcc-ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInGf-GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
+||+|+|+ |++|+.+++.+.+. .+++++.-+|. . .| . + +.| ++++. +
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~----~----------~g----~-~--------~~G--~~vy~--s 55 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPG----K----------GG----T-T--------HLG--LPVFN--T 55 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTT----C----------TT----C-E--------ETT--EEEES--S
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCC----c----------cc----c-e--------eCC--eeccC--C
Confidence 59999995 99999999998876 47877655541 0 00 0 0 122 22331 2
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
.++++ .+.++|+|+.++......+.+...+++|.+.+|+
T Consensus 56 l~el~-~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 56 VREAV-AATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp HHHHH-HHHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred HHHHh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22221 0126899999999888888899999999987555
No 144
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.61 E-value=0.51 Score=47.06 Aligned_cols=33 Identities=30% Similarity=0.288 Sum_probs=25.4
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
|+|||+|+|.|.+|..+...|..+...+|..+.
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 446999999999999999888663246776664
No 145
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=91.54 E-value=0.29 Score=45.95 Aligned_cols=100 Identities=19% Similarity=0.235 Sum_probs=56.3
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCC---ChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFI---DAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~---~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
++|.|.| +|.||+.+++.|.+++ .+|+++..... +++....+-.... ..++. +.+ .
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~~~l~~------~~v~~-------v~~------D 64 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKA------SGANI-------VHG------S 64 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHT------TTCEE-------ECC------C
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccccCHHHHHHHHHHHh------CCCEE-------EEe------c
Confidence 4899999 8999999999999885 67777654211 1222211111100 00111 000 0
Q ss_pred cCCCCCCCCcccCcCEEEEccCcc---cCHHHHHHHHhCC-CCEEEEe
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVF---TTIAKASAHMKGG-AKKVVIS 209 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f---~s~e~a~~hl~aG-akkVVIS 209 (425)
-.|++.+.-.-.++|+||.++|.. .....+.+..++| .+++|.|
T Consensus 65 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S 112 (308)
T 1qyc_A 65 IDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPS 112 (308)
T ss_dssp TTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECS
T ss_pred cCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeec
Confidence 112222211123799999999753 3455566667778 9998854
No 146
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=91.47 E-value=0.4 Score=41.58 Aligned_cols=84 Identities=19% Similarity=0.210 Sum_probs=57.1
Q ss_pred eeEEEEcc----ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 90 TKVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInGf----GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
.+|||+|. |.+|+.+++-|.+.+ ++|..+|-. . . ++. +.|. +++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vnp~---~----------------~-------g~~--i~G~--~~~- 61 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVSPK---V----------------A-------GKT--LLGQ--QGY- 61 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEECSS---S----------------T-------TSE--ETTE--ECC-
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeCCc---c----------------c-------ccc--cCCe--ecc-
Confidence 48999997 899999999998775 777666541 0 0 001 1231 222
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEe
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVIS 209 (425)
.++++++ ..+|+|+-|+......+-+...++.|+|.+++.
T Consensus 62 -~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~ 101 (145)
T 2duw_A 62 -ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQ 101 (145)
T ss_dssp -SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECC
T ss_pred -CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEc
Confidence 2456665 379999999986655666666777899988884
No 147
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.78 E-value=0.19 Score=46.08 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=27.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
++||+|+|+|.+|+.+++.|.+.. .+++.+.+.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g-~~V~~v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ-IPAIIANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT-CCEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECC
Confidence 469999999999999999998874 677765663
No 148
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=90.58 E-value=0.96 Score=39.03 Aligned_cols=82 Identities=24% Similarity=0.312 Sum_probs=57.6
Q ss_pred eeEEEEcc----ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 90 TKVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInGf----GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
.+|||+|. |++|+.+++.|.+.+ ++|..||-. ++ + +.|. +++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vnp~------------~~----------~--------i~G~--~~y- 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPK------------YE----------E--------VLGR--KCY- 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT------------CS----------E--------ETTE--ECB-
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEECCC------------CC----------e--------ECCe--ecc-
Confidence 58999996 799999999998874 787777531 01 0 1221 122
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEe
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVIS 209 (425)
.+.++++ ..+|+|+-++......+.+...++.|+|.+++.
T Consensus 69 -~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~ 108 (144)
T 2d59_A 69 -PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQ 108 (144)
T ss_dssp -SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred -CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEC
Confidence 2345554 369999999987766777777888999988774
No 149
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.50 E-value=1 Score=43.86 Aligned_cols=40 Identities=25% Similarity=0.203 Sum_probs=31.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFK 134 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~ 134 (425)
.||||+|.|.+|..+.+.+. . .++|+..+- +++.+..+.+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~---~~~~~~~~~~ 52 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDV---SEKALEAARE 52 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEECS---CHHHHHHHHH
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEEEC---CHHHHHHHHH
Confidence 49999999999999999998 7 588776653 5666655554
No 150
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=90.34 E-value=0.35 Score=50.04 Aligned_cols=101 Identities=15% Similarity=0.242 Sum_probs=66.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCC--------C-ChHHHhHhhhccccc-CCccceEEEeCCCeEEECCE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF--------I-DAKYMAYMFKYDSTH-GVFKGTINVVDDSTLEINGK 159 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~--------~-~~~~~ayll~yDS~~-g~f~~~v~~~~~~~l~i~Gk 159 (425)
.+|+|-|||-+|+.+++.|.+. ...||+|.|.. . +++.+..|++|...+ |.+..-. +.+ +.+
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~-----~~~--~a~ 302 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYA-----DKF--GVQ 302 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHH-TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHH-----HHH--TCE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcc-----ccc--CCE
Confidence 5899999999999999999887 48999988731 2 454555666654332 2222100 000 112
Q ss_pred EEEEEecCCCCCCCCcccCcCEEEEcc-CcccCHHHHHHHHhCCCCEE
Q 014424 160 LIKVFSKRDPAEIPWGDYGVDYVVESS-GVFTTIAKASAHMKGGAKKV 206 (425)
Q Consensus 160 ~I~v~~~~dp~~i~W~~~gvDiV~esT-G~f~s~e~a~~hl~aGakkV 206 (425)
.+ +++++ | ...+|+.+-|+ +..++.+.++.....|||.|
T Consensus 303 ~i------~~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV 342 (449)
T 1bgv_A 303 FF------PGEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVKYY 342 (449)
T ss_dssp EE------ETCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCCEE
T ss_pred Ee------Cchhh-h-cCCcceeeccccccccchhhHHHHHhcCCeEE
Confidence 11 12333 7 46899999998 77788898988777788643
No 151
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.22 E-value=1.7 Score=41.76 Aligned_cols=32 Identities=31% Similarity=0.315 Sum_probs=25.4
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|+|||+|+|.|.+|..+...|. . ..+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-L-YHDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-c-CCceEEEEC
Confidence 5679999999999999998888 5 367766654
No 152
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.14 E-value=0.45 Score=45.63 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=27.7
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++||-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 57 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDN 57 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 46999999 9999999999999885 78887755
No 153
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.12 E-value=0.19 Score=47.17 Aligned_cols=31 Identities=26% Similarity=0.268 Sum_probs=26.1
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-CcEEEEEC
Confidence 4899999 8999999999998875 67776654
No 154
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.64 E-value=0.87 Score=44.72 Aligned_cols=35 Identities=29% Similarity=0.262 Sum_probs=26.6
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
+|++||+|+|.|.+|..+...+..++.++ |.+-|.
T Consensus 12 ~~~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di 46 (328)
T 2hjr_A 12 IMRKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDI 46 (328)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 45569999999999999998888775347 445553
No 155
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.00 E-value=0.36 Score=40.46 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=29.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
.+|.|.|+|++|+.+++.|.+++ .+++.+.. +++..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g-~~V~~id~---~~~~~ 42 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG-KKVLAVDK---SKEKI 42 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEES---CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEEC---CHHHH
Confidence 48999999999999999999874 78887754 45544
No 156
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.84 E-value=0.39 Score=45.53 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=26.5
Q ss_pred CceeEEEEcc-ChHHHHHHHHHHcCCCceEEEEc
Q 014424 88 GNTKVGINGF-GRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 88 m~ikVaInGf-GrIGr~vlr~l~~~~~~evvaIn 120 (425)
|++||+|+|. |.+|+.+.+.|.+.+ ++|+.++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g-~~V~~~~ 42 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSA-HHLAAIE 42 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSS-SEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 4469999998 999999999998874 6877554
No 157
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=88.83 E-value=1.3 Score=37.52 Aligned_cols=80 Identities=18% Similarity=0.130 Sum_probs=57.8
Q ss_pred eEEEEcc----ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 91 KVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 91 kVaInGf----GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
+|||+|. +++|..+++-|.+++ ++|..||-. +++ +.|.+ . -
T Consensus 6 siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~------------~~~------------------i~G~~--~--y 50 (122)
T 3ff4_A 6 KTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK------------KGE------------------VLGKT--I--I 50 (122)
T ss_dssp CEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS------------CSE------------------ETTEE--C--B
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC------------CCc------------------CCCee--c--c
Confidence 7999992 889999999999875 798888841 122 12211 1 1
Q ss_pred CCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEe
Q 014424 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 167 ~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVIS 209 (425)
.+.+++| . +|+|+-++......+..+...+.|+|.|+++
T Consensus 51 ~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~ 89 (122)
T 3ff4_A 51 NERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFN 89 (122)
T ss_dssp CSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEEC
T ss_pred CChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEEC
Confidence 2456665 4 8999999987766666777778899987775
No 158
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.80 E-value=0.31 Score=46.19 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=24.7
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEE
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaI 119 (425)
|++||+|+|+|.+|+.+.+.|...+ ++|..+
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~ 34 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAG-YSLVVS 34 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT-CEEEEE
T ss_pred ccceEEEECchHHHHHHHHHHHhCC-CEEEEE
Confidence 4569999999999999999998774 676544
No 159
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=88.23 E-value=1.5 Score=44.94 Aligned_cols=86 Identities=22% Similarity=0.319 Sum_probs=54.9
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCC--------CChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF--------IDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLI 161 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~--------~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I 161 (425)
.+|+|-|||-||+.+++.|.+. ...||+|.|.. .+.+.+..+.+ .+|... + +
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~-GakVVavsD~~G~i~dp~Gld~~~l~~~~~---~~g~v~-------~--~------- 278 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERL-GMRVVAVATSMGGMYAPEGLDVAEVLSAYE---ATGSLP-------R--L------- 278 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETTEEEECTTCCCHHHHHHHHH---HHSSCS-------C--C-------
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEEcCCCeEECCCCCCHHHHHHHHH---hhCCcc-------e--e-------
Confidence 5899999999999999999887 48999998841 14444433321 122111 0 0
Q ss_pred EEEecCCCCCCCCcccCcCEEEEcc-CcccCHHHHHHHHhCCCC
Q 014424 162 KVFSKRDPAEIPWGDYGVDYVVESS-GVFTTIAKASAHMKGGAK 204 (425)
Q Consensus 162 ~v~~~~dp~~i~W~~~gvDiV~esT-G~f~s~e~a~~hl~aGak 204 (425)
..+++++ |. ..+|+.+.|+ +...+.+.++. -+||
T Consensus 279 ----~~~~~e~-~~-~~~DVliP~A~~n~i~~~~A~~---l~ak 313 (419)
T 3aoe_E 279 ----DLAPEEV-FG-LEAEVLVLAAREGALDGDRARQ---VQAQ 313 (419)
T ss_dssp ----CBCTTTG-GG-SSCSEEEECSCTTCBCHHHHTT---CCCS
T ss_pred ----eccchhh-hc-cCceEEEecccccccccchHhh---CCce
Confidence 0122333 64 6899999998 55667665543 2665
No 160
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.15 E-value=0.52 Score=38.72 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=26.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+||.|.|+|.+|+.+++.|.+.+ .+++.+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG-HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 38999999999999999998874 78776654
No 161
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.11 E-value=0.48 Score=40.51 Aligned_cols=31 Identities=10% Similarity=0.111 Sum_probs=26.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|.|.|+|++|+.+++.|.+.+ .+++.|..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g-~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG-QNVTVISN 34 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 48999999999999999998874 78887754
No 162
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=88.05 E-value=0.35 Score=46.88 Aligned_cols=36 Identities=28% Similarity=0.198 Sum_probs=29.1
Q ss_pred CCCceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 86 SDGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 86 ~~m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|++||.|.| +|.||+.+++.|.+++..+|+++..
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 57 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM 57 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC
Confidence 34457999999 9999999999999874578888765
No 163
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=88.01 E-value=1.1 Score=46.28 Aligned_cols=102 Identities=16% Similarity=0.230 Sum_probs=64.3
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCC--------CChHHHhHhhhcc-cccCCccceEEEeCCCeEEECCE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF--------IDAKYMAYMFKYD-STHGVFKGTINVVDDSTLEINGK 159 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~--------~~~~~~ayll~yD-S~~g~f~~~v~~~~~~~l~i~Gk 159 (425)
-.+|+|=|||-||..+++.|.+.. ..||++.|.. .|.+.+.++++.. +..|+.....+.. + .+
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~-g------~~ 306 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEFG-ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEF-G------LV 306 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHH-T------CE
T ss_pred CCEEEEeCCChHHHHHHHHHHhcC-CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccC-C------cE
Confidence 359999999999999999998874 7899887632 3555665555422 1122211100000 1 01
Q ss_pred EEEEEecCCCCCCCCcccCcCEEEEcc-CcccCHHHHHHHHhCCCCEE
Q 014424 160 LIKVFSKRDPAEIPWGDYGVDYVVESS-GVFTTIAKASAHMKGGAKKV 206 (425)
Q Consensus 160 ~I~v~~~~dp~~i~W~~~gvDiV~esT-G~f~s~e~a~~hl~aGakkV 206 (425)
.. +++++ |. ..+||.+=|. +.-++.+.++...+.|+|-|
T Consensus 307 ---~~---~~~~i-~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~I 346 (450)
T 4fcc_A 307 ---YL---EGQQP-WS-VPVDIALPCATQNELDVDAAHQLIANGVKAV 346 (450)
T ss_dssp ---EE---ETCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCEE
T ss_pred ---Ee---cCccc-cc-CCccEEeeccccccccHHHHHHHHhcCceEE
Confidence 11 12332 64 6899999987 66788888888777788644
No 164
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.91 E-value=0.43 Score=45.02 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=29.2
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
|++||+|+|.|.+|..+.+.|.+.+ .+|..++. +.+.+..+
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r---~~~~~~~~ 42 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLIDQ---WPAHIEAI 42 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC-CcEEEEEC---CHHHHHHH
Confidence 3469999999999999999998774 67766643 44444333
No 165
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=87.83 E-value=0.45 Score=46.70 Aligned_cols=37 Identities=16% Similarity=0.030 Sum_probs=28.4
Q ss_pred CCCCCce-eEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 84 SRSDGNT-KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 84 ~~~~m~i-kVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++.+|+| ||+|+|.|.+|..+...|.+.. .+|..++.
T Consensus 9 ~~~~m~M~kI~iIG~G~mG~~la~~L~~~G-~~V~~~~r 46 (366)
T 1evy_A 9 KDELLYLNKAVVFGSGAFGTALAMVLSKKC-REVCVWHM 46 (366)
T ss_dssp CCCCCCEEEEEEECCSHHHHHHHHHHTTTE-EEEEEECS
T ss_pred hhHhhccCeEEEECCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 3555655 9999999999999999988763 67665543
No 166
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.82 E-value=0.41 Score=44.42 Aligned_cols=42 Identities=14% Similarity=0.298 Sum_probs=29.7
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCc---eEEEEcCCCCChHHHhHh
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDV---DVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~---evvaInd~~~~~~~~ayl 132 (425)
|++||+|+|+|.+|+.+.+.|.+...+ +|... |. +++.+..+
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~-~r--~~~~~~~~ 45 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICS-DL--NTANLKNA 45 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEE-CS--CHHHHHHH
T ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEE-eC--CHHHHHHH
Confidence 456999999999999999999887421 65544 43 45554443
No 167
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=87.66 E-value=0.42 Score=46.98 Aligned_cols=31 Identities=23% Similarity=0.211 Sum_probs=26.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.|... .++|++.+.
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~-G~~V~~~dr 170 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW-GFPLRCWSR 170 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEcC
Confidence 4899999999999999999877 488776654
No 168
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=87.64 E-value=0.47 Score=47.32 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=26.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.|... .++|.+.+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~~dr 204 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF-GLAIHYHNR 204 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT-TCEEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHC-CCEEEEECC
Confidence 4899999999999999999877 488876654
No 169
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=87.58 E-value=1 Score=43.92 Aligned_cols=31 Identities=29% Similarity=0.475 Sum_probs=23.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
|||+|+|.|.||+.+.-+|..++.+ ||+ +-|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~-L~D 32 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIA-LVD 32 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEE-EEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEE-EEe
Confidence 4999999999999998877766544 444 445
No 170
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=87.38 E-value=1.1 Score=38.56 Aligned_cols=86 Identities=13% Similarity=0.115 Sum_probs=56.8
Q ss_pred eeEEEEcc----ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 90 TKVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInGf----GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
.+|||+|. |+.|+.+++.|.+++ ++|..||- +. .+++ +.|. +++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vnp-----~~-----~~~~------------------i~G~--~~~- 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVNP-----RF-----QGEE------------------LFGE--EAV- 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEECG-----GG-----TTSE------------------ETTE--ECB-
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeCC-----Cc-----ccCc------------------CCCE--Eec-
Confidence 48999996 899999999998874 78766653 10 0111 1232 222
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.+.++++ ..+|+|+-++......+.+....+.|+|.+++...
T Consensus 62 -~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 62 -ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp -SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred -CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 2344554 36899999987655555566677789998888643
No 171
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=87.36 E-value=0.19 Score=47.74 Aligned_cols=38 Identities=13% Similarity=0.127 Sum_probs=23.9
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
|++||+|+|.|.+|+.+.+.|... ++|+.+.+. +.+..
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~--~~~~~ 38 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKDR--YEIGYILSR--SIDRA 38 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC------CCCEECS--SHHHH
T ss_pred CCceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeC--CHHHH
Confidence 456999999999999999988765 676545553 45444
No 172
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=87.30 E-value=0.47 Score=47.01 Aligned_cols=31 Identities=26% Similarity=0.331 Sum_probs=26.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.|...+ ++|.+.+.
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G-~~V~~~d~ 172 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFG-MKVLCYDV 172 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEECcCHHHHHHHHHHHHCc-CEEEEECC
Confidence 58999999999999999998774 88876654
No 173
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=87.03 E-value=3.9 Score=38.47 Aligned_cols=31 Identities=16% Similarity=0.105 Sum_probs=26.6
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 43 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHG-YKVRGTAR 43 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 5899999 8999999999999885 68877654
No 174
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=86.98 E-value=1.9 Score=44.79 Aligned_cols=40 Identities=25% Similarity=0.291 Sum_probs=30.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
.||||+|.|.+|..+...+.... ++|+.. |. +.+.+..+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG-~~V~l~-D~--~~e~l~~~~ 45 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG-HQVLLY-DI--SAEALTRAI 45 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--CHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CeEEEE-EC--CHHHHHHHH
Confidence 48999999999999999998874 787655 42 566554443
No 175
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=86.81 E-value=0.52 Score=46.57 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=26.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.|... .++|.+.+.
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~dr 171 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF-GMKVLGVSR 171 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred ceEEEEEECHHHHHHHHHHHhC-CCEEEEEcC
Confidence 4899999999999999999877 488776653
No 176
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=86.78 E-value=0.53 Score=46.50 Aligned_cols=31 Identities=29% Similarity=0.405 Sum_probs=26.8
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.|... .++|.+.+.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~-G~~V~~~dr 168 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL-GMHVIGVNT 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCEEEEECC
Confidence 4899999999999999999877 488877654
No 177
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=86.70 E-value=0.53 Score=46.61 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=25.9
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.+... .+++.+.+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g~~v~~~d 171 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred cEEEEECcchHHHHHHHhhccc-CceeeecC
Confidence 5899999999999999999877 48887664
No 178
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=86.67 E-value=1.3 Score=43.12 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=26.8
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcC-CCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFR-DDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~-~~~evvaInd 121 (425)
.++|-|.| +|.||+.+++.|.++ +..+|+++..
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 35899999 999999999999887 5337777654
No 179
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=86.59 E-value=2.4 Score=41.57 Aligned_cols=30 Identities=37% Similarity=0.464 Sum_probs=23.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaI 119 (425)
|||+|+|.|.||..++..+..++-+ +|+-+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~ 31 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMV 31 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 4999999999999999888876533 55544
No 180
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=86.55 E-value=2.4 Score=40.91 Aligned_cols=30 Identities=30% Similarity=0.463 Sum_probs=23.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaI 119 (425)
+||+|+|.|.+|..++..|...+.+ +|+-+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~ 31 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLV 31 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 3999999999999999888877522 65544
No 181
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=86.51 E-value=0.65 Score=45.18 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=26.7
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
|++||+|+|+|.+|..+.+.|.+.+..+|...+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~d 55 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYD 55 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEe
Confidence 557999999999999999999887426766554
No 182
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=86.50 E-value=2.5 Score=42.09 Aligned_cols=24 Identities=29% Similarity=0.445 Sum_probs=19.8
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRD 112 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~ 112 (425)
.+||+|.| .|.||+.++-+|...+
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~~ 48 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARGA 48 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHTT
T ss_pred CCEEEEECcCcHHHHHHHHHHHhcc
Confidence 68999999 6999999887766543
No 183
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.48 E-value=0.54 Score=42.94 Aligned_cols=32 Identities=28% Similarity=0.262 Sum_probs=25.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++||+|+|+|.+|+.+++.|.+.+ .+|+.++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 359999999999999999998774 57665543
No 184
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=86.46 E-value=0.55 Score=46.25 Aligned_cols=31 Identities=29% Similarity=0.491 Sum_probs=26.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.+... .++|.+.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d~ 177 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM-GATVIGEDV 177 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999999876 488766543
No 185
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=86.38 E-value=0.55 Score=45.77 Aligned_cols=30 Identities=30% Similarity=0.406 Sum_probs=25.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.|...+ ++|.+.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALG-AQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998774 7876554
No 186
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=86.36 E-value=0.89 Score=43.99 Aligned_cols=86 Identities=21% Similarity=0.204 Sum_probs=56.5
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
+||+|+| +|+.|+.+++.+.+. .+++++.-+|.. .+. + +.| ++++. +
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~------------------~g~-~--------i~G--~~vy~--s 55 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGK------------------GGM-E--------VLG--VPVYD--T 55 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC------------------TTC-E--------ETT--EEEES--S
T ss_pred CEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCC------------------CCc-e--------ECC--EEeeC--C
Confidence 5999999 599999999998876 588764333310 000 0 222 22331 1
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
.++++- +.++|+++.++......+.+...++.|.+.+|+
T Consensus 56 l~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 56 VKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp HHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 222220 126899999998888888888889999996665
No 187
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=86.24 E-value=0.57 Score=46.66 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=26.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.|... .++|.+.+.
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G~~V~~~d~ 179 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-GAKVIAYDV 179 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CeEEEEecCHHHHHHHHHHhhC-CCEEEEECC
Confidence 4899999999999999999877 488876654
No 188
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=86.23 E-value=0.63 Score=46.12 Aligned_cols=31 Identities=29% Similarity=0.445 Sum_probs=26.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.|...+ ++|++.+.
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G-~~V~~~d~ 196 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFG-MKTIGYDP 196 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998764 88877654
No 189
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=86.22 E-value=0.58 Score=46.72 Aligned_cols=31 Identities=29% Similarity=0.514 Sum_probs=26.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~ 191 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFG-MNVLVWGR 191 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEECC
Confidence 48999999999999999998774 88877653
No 190
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=86.20 E-value=0.58 Score=46.18 Aligned_cols=31 Identities=26% Similarity=0.461 Sum_probs=26.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 176 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFG-AKVIAYDP 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998774 88776543
No 191
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.92 E-value=0.68 Score=47.93 Aligned_cols=91 Identities=14% Similarity=0.099 Sum_probs=53.7
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
+.||.|.|.|.+|+.+++.|.+++.++|+.++. +.+....+.+. .+ +.. +.+ ...+
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R---~~~ka~~la~~---~~-----~~~-----~~~--------D~~d 78 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVACR---TLANAQALAKP---SG-----SKA-----ISL--------DVTD 78 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEES---SHHHHHHHHGG---GT-----CEE-----EEC--------CTTC
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEEC---CHHHHHHHHHh---cC-----CcE-----EEE--------ecCC
Confidence 358999999999999999999886678665554 34433233221 11 000 000 0011
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGa 203 (425)
++.+.-.-.++|+||.|++.+.....+...+++|.
T Consensus 79 ~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~ 113 (467)
T 2axq_A 79 DSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT 113 (467)
T ss_dssp HHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC
Confidence 11110001378999999998765555666777776
No 192
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=85.83 E-value=0.6 Score=46.61 Aligned_cols=31 Identities=26% Similarity=0.434 Sum_probs=26.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~-G~~V~~~dr 195 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF-GCNLLYHDR 195 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCEEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHC-CCEEEEeCC
Confidence 4899999999999999999876 488776653
No 193
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=85.74 E-value=0.54 Score=46.40 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=26.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.|... .++|++.+.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~d~ 176 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW-GATLQYHEA 176 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS-CCEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEECC
Confidence 4999999999999999998766 488776653
No 194
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=85.70 E-value=0.7 Score=45.30 Aligned_cols=31 Identities=32% Similarity=0.522 Sum_probs=26.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d~ 177 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFD-MDIDYFDT 177 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998764 78876653
No 195
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=85.65 E-value=0.7 Score=45.98 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=25.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.+... .++|.+.+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~-G~~V~~~d 201 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF-GMSVRYWN 201 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEc
Confidence 4999999999999999999876 47876554
No 196
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=85.58 E-value=0.7 Score=45.99 Aligned_cols=30 Identities=30% Similarity=0.450 Sum_probs=25.8
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.|...+ ++|.+.+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G-~~V~~~d 198 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFG-FNVLFYD 198 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998774 8877654
No 197
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=85.38 E-value=0.7 Score=47.33 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=29.1
Q ss_pred eeEEEEccChHHHHHHHHHHc-CCCceEEEEcCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAF-RDDVDVVAVNDP 122 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~-~~~~evvaInd~ 122 (425)
.+|+|.|||.||+.+++.|.+ . .+.|++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~-G~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF-GMKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc-CCEEEEEeCC
Confidence 489999999999999999988 6 5899999885
No 198
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=85.31 E-value=0.56 Score=45.59 Aligned_cols=31 Identities=35% Similarity=0.538 Sum_probs=26.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.|... .++|.+.+.
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF-GMRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhh-CcEEEEEec
Confidence 4899999999999999999876 488876653
No 199
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=85.29 E-value=0.68 Score=46.57 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=26.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.+... .++|.+.+.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f-G~~V~~~d~ 207 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF-RARIRVFDP 207 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS-CCEEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhC-CCEEEEECC
Confidence 4899999999999999999776 488876653
No 200
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=85.04 E-value=0.6 Score=44.74 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=26.2
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
++||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G-~~V~~~d 45 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP-GGVTVYD 45 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST-TCEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC-CeEEEEe
Confidence 469999999999999999998874 6776554
No 201
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.04 E-value=0.76 Score=44.00 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=30.4
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
|++||+|+|+|.+|+.+.+.|.+.+ ++|+..+. +++.+..+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~dr---~~~~~~~~ 46 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG-LSTWGADL---NPQACANL 46 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CeEEEEEC---CHHHHHHH
Confidence 3469999999999999999998874 67776643 45554443
No 202
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.03 E-value=0.59 Score=42.37 Aligned_cols=36 Identities=28% Similarity=0.213 Sum_probs=29.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
|||.|.|+|++|+.+++.|.++ ..+++.|.. +++..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g~~v~vid~---~~~~~ 36 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-KYGVVIINK---DRELC 36 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-TCCEEEEES---CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEC---CHHHH
Confidence 3899999999999999999887 478887764 45544
No 203
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=84.90 E-value=1.1 Score=45.54 Aligned_cols=46 Identities=26% Similarity=0.216 Sum_probs=35.9
Q ss_pred CCCceeEEEEc-cChHHHHHHHHHHcCCC-ceEEEEcCCCCChHHHhHhh
Q 014424 86 SDGNTKVGING-FGRIGRLVLRVAAFRDD-VDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 86 ~~m~ikVaInG-fGrIGr~vlr~l~~~~~-~evvaInd~~~~~~~~ayll 133 (425)
+.| .+|.|.| ||-||.+.|+.+..+|+ |+|+++.. ..+.+.|+...
T Consensus 7 ~~~-k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~a-g~nv~~L~~q~ 54 (406)
T 1q0q_A 7 SGM-KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-GKNVTRMVEQC 54 (406)
T ss_dssp --C-EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSCHHHHHHHH
T ss_pred CCc-eeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEc-CCCHHHHHHHH
Confidence 355 4999999 99999999999998875 99999977 35666665443
No 204
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=84.86 E-value=0.75 Score=44.91 Aligned_cols=30 Identities=33% Similarity=0.451 Sum_probs=25.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.+...+ ++|.+.+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 174 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFG-MRVVYHA 174 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998774 7876554
No 205
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=84.75 E-value=0.81 Score=46.47 Aligned_cols=44 Identities=25% Similarity=0.219 Sum_probs=34.9
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCC-ceEEEEcCCCCChHHHhHhh
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDD-VDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~-~evvaInd~~~~~~~~ayll 133 (425)
.||.|.| ||-||.+.|+.+..+|+ |+|+++..-..+.+.++...
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~ 67 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQR 67 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHH
Confidence 4899999 99999999999998875 99999976224566655443
No 206
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=84.67 E-value=0.83 Score=42.35 Aligned_cols=38 Identities=13% Similarity=0.280 Sum_probs=27.9
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ay 131 (425)
+||+|+|+|.+|+.+++.|.+.+ .+| .+-|. +++....
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v-~~~~~--~~~~~~~ 41 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HEL-IISGS--SLERSKE 41 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEE-EEECS--SHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeE-EEECC--CHHHHHH
Confidence 49999999999999999998775 454 45553 4554433
No 207
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=84.64 E-value=0.96 Score=43.57 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=25.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+||+|+|+|.+|+.+.+.|.+.+ ++|+..+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~d 51 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNG-FKVTVWN 51 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CeEEEEe
Confidence 49999999999999999998875 6776554
No 208
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=84.63 E-value=0.63 Score=43.23 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=27.7
Q ss_pred CCceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 87 DGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 87 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.|+|||-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 3 ~M~m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (287)
T 3sc6_A 3 AMKERVIITGANGQLGKQLQEELNPEE-YDIYPFDK 37 (287)
T ss_dssp --CEEEEEESTTSHHHHHHHHHSCTTT-EEEEEECT
T ss_pred cceeEEEEECCCCHHHHHHHHHHHhCC-CEEEEecc
Confidence 3667999999 9999999999998874 78887753
No 209
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=84.54 E-value=0.8 Score=44.61 Aligned_cols=31 Identities=32% Similarity=0.611 Sum_probs=26.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.+...+ ++|.+.+.
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 173 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALG-MNILLYDP 173 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEEccCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998774 88876654
No 210
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=84.52 E-value=0.55 Score=44.25 Aligned_cols=30 Identities=20% Similarity=0.237 Sum_probs=25.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+||+|+|+|.+|+.+.+.|.+.+ ++|+.++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAG-HQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTT-CEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEEEc
Confidence 49999999999999999998764 6776554
No 211
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.49 E-value=1.9 Score=41.87 Aligned_cols=81 Identities=17% Similarity=0.318 Sum_probs=50.6
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCCC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPA 170 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp~ 170 (425)
+|.|+|.|.||...++++.... .+|+++... .+.+.++.+ +|. + .+ + .+++
T Consensus 179 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~---~~~~~~~~~----lGa---------~-~v-~----------~~~~ 229 (348)
T 3two_A 179 KVGVAGFGGLGSMAVKYAVAMG-AEVSVFARN---EHKKQDALS----MGV---------K-HF-Y----------TDPK 229 (348)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEEECSS---STTHHHHHH----TTC---------S-EE-E----------SSGG
T ss_pred EEEEECCcHHHHHHHHHHHHCC-CeEEEEeCC---HHHHHHHHh----cCC---------C-ee-c----------CCHH
Confidence 8999999999999999888775 688877532 222223322 110 0 11 1 1232
Q ss_pred CCCCcccCcCEEEEccCcccCHHHHHHHHhCCC
Q 014424 171 EIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (425)
Q Consensus 171 ~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGa 203 (425)
.+ . .++|+||||+|.....+.+-..++.|-
T Consensus 230 ~~--~-~~~D~vid~~g~~~~~~~~~~~l~~~G 259 (348)
T 3two_A 230 QC--K-EELDFIISTIPTHYDLKDYLKLLTYNG 259 (348)
T ss_dssp GC--C-SCEEEEEECCCSCCCHHHHHTTEEEEE
T ss_pred HH--h-cCCCEEEECCCcHHHHHHHHHHHhcCC
Confidence 22 1 289999999998766666655555444
No 212
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=84.44 E-value=1.4 Score=42.86 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=23.7
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCc-eEEEE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~-evvaI 119 (425)
++||+|+|.|.||..++..|..++-+ +|+.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~ 37 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLI 37 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEE
Confidence 45999999999999998888765422 55544
No 213
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=84.35 E-value=2.6 Score=40.70 Aligned_cols=90 Identities=19% Similarity=0.244 Sum_probs=54.5
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCCC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPA 170 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp~ 170 (425)
+|.|+|.|.||...++++......+|+++.. +.+.+.++.++ |. ...++ . .
T Consensus 174 ~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~l----Ga-----------~~~i~--------~---~ 224 (345)
T 3jv7_A 174 TAVVIGVGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREV----GA-----------DAAVK--------S---G 224 (345)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHT----TC-----------SEEEE--------C---S
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHc----CC-----------CEEEc--------C---C
Confidence 7999999999999998887654467777743 34444444332 11 00110 0 0
Q ss_pred CCCC--------cccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeC
Q 014424 171 EIPW--------GDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210 (425)
Q Consensus 171 ~i~W--------~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISa 210 (425)
+ +| +..++|+||||+|.....+.+-..++.|-+-+++..
T Consensus 225 ~-~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 225 A-GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp T-THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSC
T ss_pred C-cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECC
Confidence 0 12 123899999999976556666667766654444433
No 214
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=84.33 E-value=0.8 Score=45.11 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=26.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+++.+...+ ++|.+.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 177 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFG-AKVITYDI 177 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998774 88876654
No 215
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=84.26 E-value=0.88 Score=45.09 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=26.0
Q ss_pred eeEEEEccChHHHHHHHHHH-cCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAA-FRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~-~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+++.+. ..+ ++|++.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G-~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLG-MKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhcC-CEEEEECC
Confidence 48999999999999999998 764 78776653
No 216
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=84.22 E-value=0.84 Score=44.58 Aligned_cols=31 Identities=39% Similarity=0.536 Sum_probs=26.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d~ 173 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMG-MKVLAYDI 173 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998774 88876654
No 217
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.15 E-value=6.1 Score=38.02 Aligned_cols=30 Identities=27% Similarity=0.315 Sum_probs=24.4
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaI 119 (425)
++||+|+|.|.+|..+...|.+.+ .+|..+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE
Confidence 359999999999999999988764 566656
No 218
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=84.08 E-value=0.83 Score=46.26 Aligned_cols=30 Identities=17% Similarity=0.338 Sum_probs=25.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.|... .++|.+.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL-GIRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 4899999999999999999877 48877553
No 219
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=83.99 E-value=3.7 Score=39.85 Aligned_cols=99 Identities=24% Similarity=0.252 Sum_probs=54.8
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
+|.|+|.|.||...++++.... . +|+++.. +.+.+.++.++ |- ...++-+.-.+.+ ..
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~---~~~~~~~~~~l----Ga-----------~~vi~~~~~~~~~--~v 227 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHLG-AGRIFAVGS---RKHCCDIALEY----GA-----------TDIINYKNGDIVE--QI 227 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTTT-CSSEEEECC---CHHHHHHHHHH----TC-----------CEEECGGGSCHHH--HH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CcEEEEECC---CHHHHHHHHHh----CC-----------ceEEcCCCcCHHH--HH
Confidence 7999999999999999888764 5 6776643 34444333321 11 0111100000000 00
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
.++. ...++|+||||+|.-...+.+-..++.|-+.+.+..+
T Consensus 228 ~~~t-~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 228 LKAT-DGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp HHHT-TTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCC
T ss_pred HHHc-CCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEeccc
Confidence 0000 1237999999999865566666777766544444433
No 220
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=83.97 E-value=0.83 Score=46.42 Aligned_cols=30 Identities=30% Similarity=0.388 Sum_probs=25.9
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.+...+ ++|++.+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G-~~V~~~d 175 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLG-MYVYFYD 175 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEc
Confidence 48999999999999999998774 8887664
No 221
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=83.96 E-value=0.84 Score=46.89 Aligned_cols=42 Identities=14% Similarity=0.218 Sum_probs=31.3
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
|+|||+|+|.|.+|..+...|.+.. .+|+.++- +.+.+..+-
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G-~~V~~~D~---~~~~v~~l~ 42 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELG-ANVRCIDT---DRNKIEQLN 42 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcC-CEEEEEEC---CHHHHHHHH
Confidence 4469999999999999999998874 78776643 565554443
No 222
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=84.29 E-value=0.21 Score=45.60 Aligned_cols=43 Identities=28% Similarity=0.229 Sum_probs=31.5
Q ss_pred cccCCccccCCCCCCceeEEEEccChHHHHHHHHHHcCCCceEEEE
Q 014424 74 ATEIPPTIQKSRSDGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (425)
Q Consensus 74 ~~~~~~~~~~~~~~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaI 119 (425)
+.++|-....+ .|.+||+|+|+|.+|+.+.+.|.+.. .+|..+
T Consensus 6 ~~~~~~~~~~~--~~~~~I~iIG~G~mG~~la~~L~~~G-~~V~~~ 48 (201)
T 2yjz_A 6 ADEFPLTVDSS--EKQGVVCIFGTGDFGKSLGLKMLQCG-YSVVFG 48 (201)
Confidence 44667666555 45569999999999999999887663 555433
No 223
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=83.81 E-value=2.7 Score=41.13 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=25.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
+||+|+|.|.+|..+...|..++.++ +.+-|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 59999999999999998888775447 445563
No 224
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=83.80 E-value=0.86 Score=46.06 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=25.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.|... .++|.+.+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL-GWKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHC-CCEEEEEc
Confidence 5899999999999999999877 48876543
No 225
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=83.71 E-value=0.86 Score=45.06 Aligned_cols=30 Identities=37% Similarity=0.484 Sum_probs=25.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.+...+ ++|.+.+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~d 194 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFD-CPISYFS 194 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998764 7776554
No 226
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=83.68 E-value=0.82 Score=44.87 Aligned_cols=31 Identities=32% Similarity=0.435 Sum_probs=26.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|||+|+|+||+.+++.+...+ ++|.+.+.
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~ 186 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFG-VQRFLYTG 186 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CCEEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998764 78776653
No 227
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=83.62 E-value=2.6 Score=41.16 Aligned_cols=32 Identities=25% Similarity=0.252 Sum_probs=24.1
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
++||+|+|.|.||..++-.|..++.+ +|+ +-|
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~-L~D 37 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFV-IVD 37 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEE-EEC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEE-EEe
Confidence 35999999999999888887766533 444 445
No 228
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=83.34 E-value=1.3 Score=40.90 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=25.7
Q ss_pred eEEEEc-cChHHHHHHHHHHcC-CCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFR-DDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~-~~~evvaInd 121 (425)
||.|.| +|.||+.+++.|.++ +..+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence 578999 899999999999886 3478887754
No 229
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=83.31 E-value=0.95 Score=44.50 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=26.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|||+|+|+||+.+.+.+...+ ++|.+.+.
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~ 181 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFN-MRILYYSR 181 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEEECC
Confidence 48999999999999999998774 78776653
No 230
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=83.27 E-value=2.9 Score=43.07 Aligned_cols=33 Identities=36% Similarity=0.557 Sum_probs=29.5
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
..||+|-|||-||+.+++.|.+. ...||+|.|.
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~-GakvVavsD~ 267 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDH-GARVVAVQDH 267 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS
T ss_pred CCEEEEeccCHHHHHHHHHHHHC-CCEEEEEEcC
Confidence 35999999999999999999987 4899999985
No 231
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.25 E-value=1 Score=39.39 Aligned_cols=36 Identities=22% Similarity=0.189 Sum_probs=28.5
Q ss_pred eeEEEEccChHHHHHHHHHHcC-CCceEEEEcCCCCChHHH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~-~~~evvaInd~~~~~~~~ 129 (425)
.+|.|.|+|++|+.+++.|.++ + .+++.+.. +++..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~---~~~~~ 76 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG-KISLGIEI---REEAA 76 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC-SCEEEEES---CHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccC-CeEEEEEC---CHHHH
Confidence 4899999999999999999875 4 67777754 45544
No 232
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=83.24 E-value=1.2 Score=44.40 Aligned_cols=92 Identities=20% Similarity=0.163 Sum_probs=55.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
.||+|+|.|.+|+.+++.|.++ .+|. |.+. +.+....+.+ .+ ..+.. ...+.
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~--~~V~-V~~R--~~~~a~~la~------~~-~~~~~----------------d~~~~ 68 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE--FDVY-IGDV--NNENLEKVKE------FA-TPLKV----------------DASNF 68 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEE-EEES--CHHHHHHHTT------TS-EEEEC----------------CTTCH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC--CeEE-EEEC--CHHHHHHHHh------hC-CeEEE----------------ecCCH
Confidence 4999999999999999999876 5654 5553 4555433321 01 00111 00011
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEe
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVIS 209 (425)
+.+.=--.++|+|+.|++.....+.+.+.+++|+--+.+|
T Consensus 69 ~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 69 DKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp HHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCeEEEcc
Confidence 1110001268999999987666667788899888544443
No 233
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=83.22 E-value=1.1 Score=43.22 Aligned_cols=40 Identities=20% Similarity=0.271 Sum_probs=30.2
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
++||+|+|+|.+|+.+.+.|.+.. ++|+..+. +++....+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~dr---~~~~~~~~ 48 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIWNR---SPGKAAAL 48 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---SHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHH
Confidence 459999999999999999998874 67765543 45554443
No 234
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=83.17 E-value=0.93 Score=44.64 Aligned_cols=31 Identities=32% Similarity=0.396 Sum_probs=26.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+.+.+...+ ++|.+.+.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~d~ 177 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFG-VKLYYWSR 177 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998764 78776553
No 235
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=82.97 E-value=1 Score=43.42 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=25.6
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
++||+|+|.|.+|..+.+.|...+ .+|..++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g-~~V~~~~ 34 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKG-QSVLAWD 34 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 469999999999999999888764 6766554
No 236
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=82.94 E-value=0.93 Score=39.94 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=27.7
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
|.+||.|.| +|.||+.+++.|.+++.+ +|+++..
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r 39 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR 39 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 446999999 999999999999998643 7766544
No 237
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=82.87 E-value=1 Score=43.71 Aligned_cols=38 Identities=18% Similarity=0.127 Sum_probs=29.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ay 131 (425)
+||+|+|+|.+|+.+.+.|.+.. ++|+..+. +++....
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~dr---~~~~~~~ 69 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAG-YALQVWNR---TPARAAS 69 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTT-CEEEEECS---CHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHhCC-CeEEEEcC---CHHHHHH
Confidence 59999999999999999998874 78765543 4554433
No 238
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=82.80 E-value=0.96 Score=45.91 Aligned_cols=31 Identities=39% Similarity=0.390 Sum_probs=26.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|||+|+|+||+.+++.|...+ ++|.+.+.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~~d~ 222 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFD-VHLHYTDR 222 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEEcC
Confidence 48999999999999999998764 88776653
No 239
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=82.69 E-value=3.5 Score=40.45 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=23.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
+||+|+|.|.||..++-.|..++-+ +|+ +-|
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~~~~~el~-L~D 41 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIG-IVD 41 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EEC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEE-EEe
Confidence 5999999999999988877766533 444 445
No 240
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=82.66 E-value=1.9 Score=41.77 Aligned_cols=85 Identities=21% Similarity=0.239 Sum_probs=56.0
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEE-EEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVV-AVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evv-aInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
.||+|.| .|+.|+.+++.+.+. .+++| .|| |... | . + +.| ++++.
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~Vn-P~~~--------------g----~-~--------i~G--~~vy~-- 60 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVT-PGKG--------------G----Q-N--------VHG--VPVFD-- 60 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCCEEEEEC-TTCT--------------T----C-E--------ETT--EEEES--
T ss_pred CEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeC-CCCC--------------C----c-e--------ECC--EeeeC--
Confidence 5899999 699999999999887 47765 444 4100 0 0 0 122 23332
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
+.++++- +.++|+++.++......+.+...+++|.+.+|+
T Consensus 61 sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 61 TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 2222320 126899999998888888888899999996554
No 241
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=82.59 E-value=0.98 Score=37.08 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=25.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|.|.|.|.+|+.+++.|.+.+ .+++.+..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d~ 37 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG-HEVLAVDI 37 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 37999999999999999998874 67666643
No 242
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=82.41 E-value=1.2 Score=39.57 Aligned_cols=31 Identities=32% Similarity=0.446 Sum_probs=27.0
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEe
Confidence 3899999 8999999999999885 78887765
No 243
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=82.37 E-value=1.1 Score=41.96 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=26.9
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|||-|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 8999999999999884 78887754
No 244
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=82.21 E-value=1.2 Score=39.72 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=26.4
Q ss_pred CceeEEEEc-cChHHHHHHHHHH-cCCCceEEEEcC
Q 014424 88 GNTKVGING-FGRIGRLVLRVAA-FRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~-~~~~~evvaInd 121 (425)
|+.+|.|.| +|.||+.+++.|. ++ ..+|+++..
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT-DMHITLYGR 38 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC-CCEEEEEES
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC-CceEEEEec
Confidence 433499999 9999999999998 55 478877754
No 245
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=82.14 E-value=1.1 Score=44.55 Aligned_cols=40 Identities=18% Similarity=0.334 Sum_probs=30.6
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
++||+|+|+|.+|+.+.+.|.+.. ++|+..+. +++....+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~dr---~~~~~~~l 61 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECVVYDL---NVNAVQAL 61 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEEEEeC---CHHHHHHH
Confidence 369999999999999999998885 77765543 45554444
No 246
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=81.88 E-value=1.2 Score=42.60 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=24.9
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+||+|+|+|.+|+.+.+.|...+ ++|..++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g-~~V~~~~ 60 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMG-HTVTVWN 60 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHHhCC-CEEEEEe
Confidence 59999999999999999998764 6765554
No 247
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=81.67 E-value=4.5 Score=44.08 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=28.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMA 130 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~a 130 (425)
.||||+|.|.+|..+...+.... ++|+.++- +.+.+.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG-~~V~l~D~---~~~~~~ 349 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSN-YPVILKEV---NEKFLE 349 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEECS---SHHHHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCC-CEEEEEEC---CHHHHH
Confidence 48999999999999999998874 78765543 455443
No 248
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=81.57 E-value=1.1 Score=42.47 Aligned_cols=39 Identities=8% Similarity=0.045 Sum_probs=29.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
+||+|+|+|.+|+.+.+.|.+.. ++|+..+. +.+....+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~d~---~~~~~~~~ 42 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG-YLLNVFDL---VQSAVDGL 42 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEECS---SHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCC-CeEEEEcC---CHHHHHHH
Confidence 49999999999999999998874 67766643 45544333
No 249
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=81.55 E-value=1.3 Score=41.06 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=26.2
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+.+||+|+|+|.+|+.+.+.|.+.. .+|...+
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~~ 49 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLG-HEVTIGT 49 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 34569999999999999999998874 6776554
No 250
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=81.50 E-value=1.1 Score=42.85 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=27.9
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCC-CceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRD-DVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~-~~evvaInd 121 (425)
++||-|.| +|.||+.+++.|.+++ +++|+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 46999999 8999999999998763 588888764
No 251
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=81.48 E-value=1 Score=41.68 Aligned_cols=24 Identities=29% Similarity=0.501 Sum_probs=20.9
Q ss_pred ceeEEEEccChHHHHHHHHHHcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRD 112 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~ 112 (425)
++||+|+|.|.+|+.+.+.|.+..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC
Confidence 359999999999999999887654
No 252
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=81.31 E-value=1 Score=43.42 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=26.7
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.|..|||++|+|.+|..+.+-|.+.. ++|+.-|
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G-~~V~v~d 35 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAG-YELVVWN 35 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTT-CEEEEC-
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCC-CeEEEEe
Confidence 56679999999999999999998874 7876544
No 253
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=81.21 E-value=1.3 Score=41.47 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=27.7
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|++||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG-EEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 456999999 8999999999999885 68887754
No 254
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.08 E-value=1.7 Score=44.08 Aligned_cols=38 Identities=29% Similarity=0.518 Sum_probs=30.7
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
+|.|.|+|++|+.+.+.|.++ ..+++.|.. +++.+..+
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~-g~~vvvId~---d~~~v~~~ 43 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSS-GVKMVVLDH---DPDHIETL 43 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEEC---CHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHHHHH
Confidence 899999999999999999987 488888854 56654333
No 255
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=81.07 E-value=1.6 Score=41.77 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=25.5
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEc
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaIn 120 (425)
|+.||+|+| +|.||..+.+.|.+.. .+|..++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~~ 52 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG-YPISILD 52 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 445999999 9999999999998764 5665443
No 256
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=81.05 E-value=1.1 Score=44.69 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=25.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCce-EEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVD-VVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~e-vvaIn 120 (425)
.+|||+|+|+||+.+++.|...+ ++ |.+.+
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G-~~~V~~~d 195 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFN-PKELLYYD 195 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CcEEEEEC
Confidence 48999999999999999998764 76 77665
No 257
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=81.04 E-value=1.2 Score=41.95 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=25.3
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
++||+|+|+|.+|+.+.+.|.... ++|+.++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG-VTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEEEEe
Confidence 359999999999999999998764 6766443
No 258
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=80.84 E-value=1.3 Score=45.38 Aligned_cols=30 Identities=30% Similarity=0.427 Sum_probs=25.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.+...+ ++|.+.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLG-MTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998774 8877654
No 259
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.81 E-value=5.4 Score=39.61 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=28.2
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEcCCCCChHHHhHh
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaInd~~~~~~~~ayl 132 (425)
+|.|+|.|.||...++++.... . .|+++.. +.+.+.++
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~---~~~~~~~~ 254 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHAG-ASKVILSEP---SEVRRNLA 254 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEECS---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEECC---CHHHHHHH
Confidence 7999999999999999888775 5 7776643 34444333
No 260
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=80.71 E-value=1.5 Score=41.17 Aligned_cols=31 Identities=16% Similarity=0.158 Sum_probs=24.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCC-CceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRD-DVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~-~~evvaIn 120 (425)
+||+|+|+|.+|+.+.+.|...+ ..+|+.++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d 33 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYD 33 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEe
Confidence 48999999999999999998764 12666553
No 261
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=80.65 E-value=0.61 Score=44.05 Aligned_cols=31 Identities=16% Similarity=0.010 Sum_probs=26.8
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+||+|+|.|.+|..+.+.|.+.+ .+|+.++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G-~~V~~~~~ 37 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVG-HYVTVLHA 37 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTT-CEEEECSS
T ss_pred cEEEEEeeCHHHHHHHHHHHHCC-CEEEEecC
Confidence 59999999999999999998874 78877765
No 262
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.48 E-value=1.5 Score=41.89 Aligned_cols=30 Identities=33% Similarity=0.352 Sum_probs=25.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.||+|+|.|.+|..+...|.... ++|+.++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G-~~V~~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG-HTVVLVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 48999999999999999988774 7876554
No 263
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=80.42 E-value=5.2 Score=37.35 Aligned_cols=93 Identities=16% Similarity=0.146 Sum_probs=50.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
.+|-|+|.|.+|...++.|.+.+ -+|+-|+ +..+++ +..|.+. +.+.+. . .+.++
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G-A~VtVva-p~~~~~-l~~l~~~--------~~i~~i-------~-------~~~~~ 86 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG-AAITVVA-PTVSAE-INEWEAK--------GQLRVK-------R-------KKVGE 86 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC-CCEEEEC-SSCCHH-HHHHHHT--------TSCEEE-------C-------SCCCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC-CCCCHH-HHHHHHc--------CCcEEE-------E-------CCCCH
Confidence 48999999999999999998874 4554444 333433 3333321 112221 1 12234
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEeCC
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVISap 211 (425)
+.+ .++|+||-|||.-..-+......+.|...-+++.|
T Consensus 87 ~dL----~~adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD~p 124 (223)
T 3dfz_A 87 EDL----LNVFFIVVATNDQAVNKFVKQHIKNDQLVNMASSF 124 (223)
T ss_dssp GGS----SSCSEEEECCCCTHHHHHHHHHSCTTCEEEC----
T ss_pred hHh----CCCCEEEECCCCHHHHHHHHHHHhCCCEEEEeCCc
Confidence 444 37999999998764433333333344433334444
No 264
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=80.20 E-value=1.2 Score=41.58 Aligned_cols=29 Identities=24% Similarity=0.259 Sum_probs=24.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+||+|+|+|.+|+.+.+.|.. + ++|+.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g-~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R-FPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T-SCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC-C-CeEEEEe
Confidence 489999999999999999887 4 7766554
No 265
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=80.15 E-value=1.5 Score=42.51 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=26.5
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
|++||+|+|.|.+|..++..+...+.++ +.+-|.
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di 34 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKELGD-IVLLDI 34 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeC
Confidence 4569999999999999998888776557 455563
No 266
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=80.14 E-value=1.6 Score=41.34 Aligned_cols=30 Identities=23% Similarity=0.323 Sum_probs=25.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+||+|+|+|.+|+.+.+.|.+.+ ++|+..+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEEEEc
Confidence 49999999999999999998875 7776553
No 267
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=79.99 E-value=1.5 Score=41.95 Aligned_cols=31 Identities=29% Similarity=0.330 Sum_probs=26.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|+|+|+|+||+.+++.|...+ ++|.+.+.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 48999999999999999998775 68776654
No 268
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=79.99 E-value=1.6 Score=41.33 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=26.8
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEec
Confidence 4999999 9999999999999875 78887754
No 269
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=79.94 E-value=1.3 Score=43.47 Aligned_cols=30 Identities=23% Similarity=0.516 Sum_probs=25.3
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|.|.|.||...++++.... .+|+++..
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 219 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAFG-SKVTVIST 219 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 7999999999999999988775 67777654
No 270
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=79.92 E-value=2 Score=35.83 Aligned_cols=33 Identities=24% Similarity=0.238 Sum_probs=29.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
.+|.|+|.|..|+.+++.+.+++.++++++-|.
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 489999999999999999988778999998773
No 271
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=79.60 E-value=2.1 Score=38.41 Aligned_cols=33 Identities=18% Similarity=0.199 Sum_probs=27.7
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCC-CceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRD-DVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~-~~evvaInd 121 (425)
+++|-|.| +|.||+.+++.|.+++ ..+|+++..
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 45899999 9999999999999884 578877754
No 272
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=79.47 E-value=1.7 Score=40.68 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=28.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ay 131 (425)
|||+|+|+|.+|+.+.+.|.+.. ++|+.+ +. +.+....
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~~--~~~~~~~ 38 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG-HYLIGV-SR--QQSTCEK 38 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC-CEEEEE-EC--CHHHHHH
Confidence 38999999999999999998774 677665 42 4554433
No 273
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=79.34 E-value=3 Score=40.87 Aligned_cols=96 Identities=17% Similarity=0.237 Sum_probs=54.3
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
-+|.|+| .|.||...++++......+|+++.. +.+.+.++.++ |. ...++-+. .+. ..
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~l----Ga-----------d~vi~~~~-~~~--~~ 231 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSL----GA-----------HHVIDHSK-PLA--AE 231 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHT----TC-----------SEEECTTS-CHH--HH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHc----CC-----------CEEEeCCC-CHH--HH
Confidence 3799999 9999999998887533468877754 34444444321 21 11111100 000 00
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
..++ ...++|+||||+|.....+.+-..++.|-+-+++
T Consensus 232 v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 232 VAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence 1111 2348999999999765556666677666543333
No 274
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=79.28 E-value=1.9 Score=38.42 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=26.0
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|||+|+| +|.+|+.+++.|.+++ .+|+.++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 3899999 9999999999998874 68776654
No 275
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=79.21 E-value=1.5 Score=45.37 Aligned_cols=42 Identities=21% Similarity=0.203 Sum_probs=31.0
Q ss_pred CceeEEEEccChHHHHHHHHHHcCC-CceEEEEcCCCCChHHHhHh
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRD-DVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~-~~evvaInd~~~~~~~~ayl 132 (425)
|++||+|+|.|++|..+...|.+.. ..+|+.++- +.+.+..+
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~---~~~~v~~l 50 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDM---NTAKIAEW 50 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECS---CHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEEC---CHHHHHHH
Confidence 3469999999999999998887762 478877643 45555443
No 276
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=79.20 E-value=1.8 Score=41.83 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=25.8
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|++||+|+|.|.+|..+...|.+.. .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTG-HCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 5579999999999999999888764 57766654
No 277
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=79.09 E-value=1.7 Score=41.72 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=26.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|+|+|+|+||+.+++.|...+ ++|.+.+.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVGAR 188 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 48999999999999999998775 78776654
No 278
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=79.06 E-value=2.8 Score=40.59 Aligned_cols=86 Identities=20% Similarity=0.257 Sum_probs=56.3
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEE-EEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEec
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVV-AVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evv-aInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~ 166 (425)
+.||+|.| .|+.|+.+++.+.+. .+++| .|| |... | . + +.| ++++.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~Vn-P~~~--------------g----~-~--------i~G--~~vy~- 60 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVT-PGKG--------------G----S-E--------VHG--VPVYD- 60 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEEC-TTCT--------------T----C-E--------ETT--EEEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeC-CCCC--------------C----c-e--------ECC--EeeeC-
Confidence 35899999 699999999998886 47765 444 4100 0 0 0 122 23332
Q ss_pred CCCCCCCCcccC-cCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 167 RDPAEIPWGDYG-VDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 167 ~dp~~i~W~~~g-vDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
+.++++- +.+ +|+++.++......+.+...++.|.+.+|+
T Consensus 61 -sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 61 -SVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp -SHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred -CHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2222320 114 899999998888888889999999995555
No 279
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=78.93 E-value=3.4 Score=40.43 Aligned_cols=91 Identities=20% Similarity=0.303 Sum_probs=53.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
-+|.|.|.|.||...++++...+ .+++++.. +.+.+..+.++ |- ...+ . .+.
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~l----Ga-----------~~vi--------~-~~~ 242 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATG-AEVIVTSS---SREKLDRAFAL----GA-----------DHGI--------N-RLE 242 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTT-CEEEEEES---CHHHHHHHHHH----TC-----------SEEE--------E-TTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEec---CchhHHHHHHc----CC-----------CEEE--------c-CCc
Confidence 38999999999999999888775 68877753 34444333322 11 0011 1 010
Q ss_pred CCC----C--CcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEEe
Q 014424 170 AEI----P--WGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (425)
Q Consensus 170 ~~i----~--W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVIS 209 (425)
+++ . -...++|+||||+| ....+.+-..++.|-+-+++.
T Consensus 243 ~~~~~~v~~~~~g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 243 EDWVERVYALTGDRGADHILEIAG-GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEETT-SSCHHHHHHHEEEEEEEEEEC
T ss_pred ccHHHHHHHHhCCCCceEEEECCC-hHHHHHHHHHhhcCCEEEEEe
Confidence 000 0 01237999999999 455666666666555444443
No 280
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=78.91 E-value=6.1 Score=38.79 Aligned_cols=89 Identities=28% Similarity=0.339 Sum_probs=50.6
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
+|.|+|.|.||...++++.... . .|+++.. +.+.+..+.++ |- ...++- ...+.
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~---~~~~~~~a~~l----Ga-----------~~vi~~------~~~~~ 239 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLAG-ATTVILSTR---QATKRRLAEEV----GA-----------TATVDP------SAGDV 239 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEECS---CHHHHHHHHHH----TC-----------SEEECT------TSSCH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEECC---CHHHHHHHHHc----CC-----------CEEECC------CCcCH
Confidence 8999999999999999888775 5 6666533 34444333221 10 011110 00000
Q ss_pred ----CC-CCCcccCcCEEEEccCcccCHHHHHHHHhCCCC
Q 014424 170 ----AE-IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAK 204 (425)
Q Consensus 170 ----~~-i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGak 204 (425)
.+ ..+...++|+||||+|.....+.+-..++.|-+
T Consensus 240 ~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~ 279 (370)
T 4ej6_A 240 VEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGT 279 (370)
T ss_dssp HHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEE
T ss_pred HHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCE
Confidence 00 012223899999999976555666666665543
No 281
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=78.89 E-value=2 Score=44.55 Aligned_cols=44 Identities=20% Similarity=0.107 Sum_probs=34.7
Q ss_pred ceeEEEEc-cChHHHHHHHHHHc---CC-CceEEEEcCCCCChHHHhHhh
Q 014424 89 NTKVGING-FGRIGRLVLRVAAF---RD-DVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~---~~-~~evvaInd~~~~~~~~ayll 133 (425)
|.||.|.| ||-||.+.|+.+.+ +| .|+|+++.. ....+.|+...
T Consensus 77 mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaA-g~Nv~lL~eQ~ 125 (488)
T 3au8_A 77 PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYV-NKSVNELYEQA 125 (488)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEE-SSCHHHHHHHH
T ss_pred ceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEc-CCCHHHHHHHH
Confidence 35899999 99999999999988 44 599999976 35666665443
No 282
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=78.86 E-value=1.7 Score=42.16 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=27.2
Q ss_pred CCceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 87 DGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 87 ~m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.|+.+|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 26 ~M~k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r 60 (381)
T 1n7h_A 26 EPRKIALITGITGQDGSYLTEFLLGKG-YEVHGLIR 60 (381)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred hhCCeEEEEcCCchHHHHHHHHHHHCC-CEEEEEec
Confidence 3545899999 8999999999999875 68877754
No 283
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=78.79 E-value=2.8 Score=40.62 Aligned_cols=30 Identities=30% Similarity=0.356 Sum_probs=25.0
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
+|.|+|.|.||...++++.... . +|+++..
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~ 200 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASG-AYPVIVSEP 200 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEECC
Confidence 7999999999999999988774 5 7776643
No 284
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=78.74 E-value=2.6 Score=41.78 Aligned_cols=40 Identities=25% Similarity=0.211 Sum_probs=30.4
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
..||+|+|+|.||..+.+.|...+ .+|++.+. +++.+..+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G-~~V~~~dr---~~~~~~~a 47 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN-HSVFGYNR---SRSGAKSA 47 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEEEECS---CHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHH
Confidence 359999999999999999998874 77776653 45555443
No 285
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=78.48 E-value=2 Score=40.30 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=26.7
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEc
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaIn 120 (425)
|.++|.|.| +|.||+.+++.|.+++ .+|+++.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 445899999 8999999999999875 7887765
No 286
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=78.29 E-value=2.4 Score=40.97 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=24.9
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
+|.|+|.|.||...++++.... . +|+++..
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~ 197 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRASG-AGPILVSDP 197 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEECC
Confidence 7999999999999999888774 6 7776653
No 287
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=78.20 E-value=5.1 Score=39.60 Aligned_cols=140 Identities=17% Similarity=0.124 Sum_probs=70.8
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEcCCCCChHHHhHhhhcccccC-CccceEEEeCCCeEEECCEEEEEEecC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYMFKYDSTHG-VFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd~~~~~~~~ayll~yDS~~g-~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
+||+|+|.|.||..++..+..++-+ +|+ +-|. +.+.+ .-..-|-.|+ .|.. ...+ ....
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~-L~Di--~~~~~-~g~a~DL~~~~~~~~------~~~i---------~~t~ 82 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVA-LVDV--MEDKL-KGEMMDLEHGSLFLH------TAKI---------VSGK 82 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEE-EECS--CHHHH-HHHHHHHHHHGGGSC------CSEE---------EEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEEC--CHHHH-HHHHHHhhhhhhccc------CCeE---------EEcC
Confidence 4999999999999999888877533 554 4453 33221 1111111121 1110 0111 1123
Q ss_pred CCCCCCCcccCcCEEEEccCcccC----------------HHHHHHHHh--CCCCEEEEeCCCCC-CCcEEeecCccccC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTT----------------IAKASAHMK--GGAKKVVISAPSAD-APMFVVGVNEKTYK 228 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s----------------~e~a~~hl~--aGakkVVISaps~D-vp~vV~gVN~~~~~ 228 (425)
|++++ .++|+||.+.|.-.. ++.++...+ -.+..+++|||..- ++. +. ....|.
T Consensus 83 d~~~~----~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvdi~t~~-~~--k~sg~p 155 (330)
T 3ldh_A 83 DYSVS----AGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGTDKNKQ-DW--KLSGLP 155 (330)
T ss_dssp SSCSC----SSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHH-HH--HHHCCC
T ss_pred CHHHh----CCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccHHHHHH-HH--HHhCCC
Confidence 55554 489999999876431 122222222 34555666877421 110 00 001121
Q ss_pred CCCcEEecCCchhhhHHhHHHHHHhhcCee
Q 014424 229 PNMNIVSNASCTTNCLAPLAKVVHEEFGIL 258 (425)
Q Consensus 229 ~~~~IISnaSCTTn~Lap~lk~L~d~fGI~ 258 (425)
..++|. .||+-=-+.+-..|.+.+|+.
T Consensus 156 -~~rViG--~gt~LDs~R~~~~lA~~lgv~ 182 (330)
T 3ldh_A 156 -MHRIIG--SGCNLDSARFRYLMGERLGVH 182 (330)
T ss_dssp -GGGEEC--CTTHHHHHHHHHHHHHHHTSC
T ss_pred -HHHeec--ccCchhHHHHHHHHHHHhCCC
Confidence 245663 566544456667777777765
No 288
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=78.06 E-value=2.1 Score=40.56 Aligned_cols=39 Identities=26% Similarity=0.322 Sum_probs=29.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
.||+|+|.|.+|+.+.+.+.... ++|+.. |. +.+.+..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G-~~V~l~-d~--~~~~~~~~ 43 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG-FAVTAY-DI--NTDALDAA 43 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--SHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEE-eC--CHHHHHHH
Confidence 48999999999999999998874 787654 43 45544333
No 289
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=78.01 E-value=2 Score=38.89 Aligned_cols=30 Identities=17% Similarity=0.220 Sum_probs=24.1
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaI 119 (425)
++||+|+|+|.+|+.+.+.|.+.. .+|..+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g-~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG-HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 359999999999999999998764 566544
No 290
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=77.99 E-value=1.7 Score=41.33 Aligned_cols=40 Identities=8% Similarity=0.183 Sum_probs=28.6
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCc---eEEEEcCCCCChHHHhHh
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDV---DVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~---evvaInd~~~~~~~~ayl 132 (425)
++||+|+|.|.+|+.+++.|.+.+ + +|... |+ +.+.+..+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g-~~~~~V~v~-dr--~~~~~~~l 45 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANG-YDPNRICVT-NR--SLDKLDFF 45 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTT-CCGGGEEEE-CS--SSHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC-CCCCeEEEE-eC--CHHHHHHH
Confidence 469999999999999999998774 4 55544 43 34444343
No 291
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=77.35 E-value=1.3 Score=41.82 Aligned_cols=30 Identities=27% Similarity=0.302 Sum_probs=25.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+||+|+|+|.+|+.+.+.|.+.. .+|...+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~d 31 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVWN 31 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEEC
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEEc
Confidence 49999999999999999998774 6766554
No 292
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=77.23 E-value=3.4 Score=42.28 Aligned_cols=90 Identities=12% Similarity=0.028 Sum_probs=48.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
.+|.|.|.|.||+.+++.|.+.+ .+|+.++. +.+....+.+ .+.. +.. +.+ ...++
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G-~~V~v~~R---~~~~a~~la~------~~~~-~~~-----~~~--------Dv~d~ 59 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSG-IKVTVACR---TLESAKKLSA------GVQH-STP-----ISL--------DVNDD 59 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTT-CEEEEEES---SHHHHHHTTT------TCTT-EEE-----EEC--------CTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEEC---CHHHHHHHHH------hcCC-ceE-----EEe--------ecCCH
Confidence 48999999999999999998764 67554443 3443322211 1110 000 000 00111
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCC
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGa 203 (425)
+.+.=.-.++|+|+.|+|.+...+.+...++.|.
T Consensus 60 ~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~ 93 (450)
T 1ff9_A 60 AALDAEVAKHDLVISLIPYTFHATVIKSAIRQKK 93 (450)
T ss_dssp HHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCcEEEECCccccchHHHHHHHhCCC
Confidence 1110001278999999998765555556677665
No 293
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=77.22 E-value=2.3 Score=43.67 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=30.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
|||-|.|+|++|+.+++.|.++ +.+++.|.. +++.+-.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~---d~~~~~~~ 42 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE-NNDITIVDK---DGDRLREL 42 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST-TEEEEEEES---CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHHHHH
Confidence 4999999999999999999776 478887754 56655444
No 294
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=77.20 E-value=4.2 Score=39.94 Aligned_cols=30 Identities=30% Similarity=0.557 Sum_probs=24.1
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCc-eEEEE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~-evvaI 119 (425)
++||+|+|.|.+|..++..|..++ + +|+-+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~-~~~v~L~ 37 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKE-LGDVVLF 37 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCeEEEE
Confidence 459999999999999998887764 4 65544
No 295
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=77.01 E-value=2.4 Score=41.00 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=34.2
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhh
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFK 134 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~ 134 (425)
|||.|.| +|.||+.+++.|.+++.++++.+.- ..+.+.+..+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~-~~d~~~l~~~~~ 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR-QTKEEELESALL 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT-TCCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC-CCCHHHHHHHhc
Confidence 3899999 9999999999999887568776643 246777666654
No 296
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=76.76 E-value=2 Score=40.65 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=24.7
Q ss_pred ceeEEEEccChHHHHHHHHHHcC-----CCceEEEEc
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFR-----DDVDVVAVN 120 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~-----~~~evvaIn 120 (425)
+|||+|+|.|.+|..+.+.|.+. +..+|..++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 46999999999999999888765 215666554
No 297
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=76.70 E-value=2.1 Score=44.79 Aligned_cols=30 Identities=43% Similarity=0.585 Sum_probs=26.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|||+|+|+||+.+.+.|... .++|++.+
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~-G~~V~~~d 172 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF-GAYVVAYD 172 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEC
Confidence 5899999999999999999877 47887664
No 298
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=76.65 E-value=2.1 Score=40.19 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=25.8
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEc
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+||.|.| +|.||+.+++.|.+++ .+++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLR 34 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT-TEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEe
Confidence 46999999 9999999999999874 6766553
No 299
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=76.39 E-value=1.6 Score=40.83 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=27.5
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcC-CCceEEEEcC
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFR-DDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~-~~~evvaInd 121 (425)
|.+||.|.| +|.||+.+++.|.++ +..+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 446899999 899999999999876 3467777654
No 300
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=76.17 E-value=2.1 Score=39.65 Aligned_cols=29 Identities=31% Similarity=0.510 Sum_probs=24.5
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||+|+|+|.+|+.+.+.|.+.. ++|.. .+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~ 30 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRG-VEVVT-SL 30 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEE-CC
T ss_pred eEEEEechHHHHHHHHHHHHCC-CeEEE-eC
Confidence 8999999999999999998774 67665 45
No 301
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=76.15 E-value=1.8 Score=40.66 Aligned_cols=29 Identities=17% Similarity=0.346 Sum_probs=24.4
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
||+|+|+|.+|+.+.+.|.+.+ ++|...+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g-~~V~~~~ 30 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHG-YPLIIYD 30 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTT-CCEEEEC
T ss_pred eEEEEeccHHHHHHHHHHHHCC-CEEEEEe
Confidence 8999999999999999998774 6766554
No 302
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=76.08 E-value=1.8 Score=41.75 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=24.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
+||+|+|+|.+|..+.+.|.+.. + +|...+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~d 55 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAG-AIDMAAYD 55 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS-CCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CCeEEEEc
Confidence 59999999999999999998774 5 655443
No 303
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=76.07 E-value=1.9 Score=41.49 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=24.7
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|++||+|+|.|.+|..+...|.+.+ .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSG-EDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTS-CCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC-CeEEEEEc
Confidence 5579999999999999999888764 56665654
No 304
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=75.71 E-value=2.4 Score=40.98 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=26.1
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
-|.+||+|+|.|.+|..+.+.|.+.. .+|..++.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~~r 45 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENG-EEVILWAR 45 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 46779999999999999999988764 57665543
No 305
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=75.41 E-value=2.1 Score=42.13 Aligned_cols=30 Identities=33% Similarity=0.579 Sum_probs=24.8
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|+|.|.||...++++.... .+|+++..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~ 226 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMG-AHVVAFTT 226 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 7999999999999999888774 67776653
No 306
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=75.16 E-value=2.6 Score=39.98 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=26.2
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEc
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaIn 120 (425)
|.++|-|-| +|.||+.+++.|.+++ .+|+++.
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~ 40 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKG-YAVNTTV 40 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEE
Confidence 456899999 9999999999999875 6777643
No 307
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=75.16 E-value=2.3 Score=39.29 Aligned_cols=26 Identities=19% Similarity=0.303 Sum_probs=22.7
Q ss_pred CCceeEEEEc-cChHHHHHHHHHHcCC
Q 014424 87 DGNTKVGING-FGRIGRLVLRVAAFRD 112 (425)
Q Consensus 87 ~m~ikVaInG-fGrIGr~vlr~l~~~~ 112 (425)
++++||.|.| +|.||+.+++.|.+++
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 3456999999 9999999999999875
No 308
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=75.12 E-value=1.4 Score=41.99 Aligned_cols=33 Identities=15% Similarity=0.092 Sum_probs=23.7
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|++||+|+|.|.+|..+...|.+.. .+|..+..
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~~r 33 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSL-PHTTLIGR 33 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHC-TTCEEEES
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCC-CeEEEEEe
Confidence 5579999999999999998887653 34444443
No 309
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=75.05 E-value=2.2 Score=40.60 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=26.2
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 8999999999999885 78877754
No 310
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=74.74 E-value=2 Score=44.01 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=29.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCC-CceEEEEcCCCCChHHHhH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRD-DVDVVAVNDPFIDAKYMAY 131 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~-~~evvaInd~~~~~~~~ay 131 (425)
+||+|+|+|.+|..+...|.+.. ..+|+.++- +.+.+..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~---~~~~~~~ 45 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDV---NESRINA 45 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECS---CHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEEC---CHHHHHH
Confidence 59999999999999999888762 478776643 4554433
No 311
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=74.66 E-value=2.2 Score=39.85 Aligned_cols=32 Identities=25% Similarity=0.171 Sum_probs=27.2
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|.|.| +|.||+.+++.|.+++..+|+++..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEc
Confidence 5899999 8999999999998875478887764
No 312
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=74.35 E-value=2.7 Score=39.98 Aligned_cols=33 Identities=21% Similarity=0.148 Sum_probs=27.5
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|.++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDN 34 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEec
Confidence 456999999 9999999999999874 67777743
No 313
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=74.32 E-value=13 Score=35.82 Aligned_cols=29 Identities=28% Similarity=0.219 Sum_probs=24.1
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+|.|+|.|.||...++++.... ..|+++.
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~ 199 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYG-AFVVCTA 199 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEc
Confidence 7999999999999999888774 6666664
No 314
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=74.15 E-value=2.9 Score=38.82 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=25.2
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||+|+|.|.+|..+.+.|.+.+ .+|..++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r 31 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQG-HEVQGWLR 31 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred eEEEECcCHHHHHHHHHHHhCC-CCEEEEEc
Confidence 8999999999999999998774 57766654
No 315
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=73.99 E-value=11 Score=36.30 Aligned_cols=86 Identities=16% Similarity=0.083 Sum_probs=51.8
Q ss_pred eeEEEEccChHHHH-HHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCC
Q 014424 90 TKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (425)
Q Consensus 90 ikVaInGfGrIGr~-vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~d 168 (425)
.||.++|.|.+|.. +.+.|.+++ .+|. +.|....+.....|-+ .+ +.+....+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G-~~V~-~~D~~~~~~~~~~L~~---------------~g---------i~v~~g~~ 58 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG-FEVS-GCDAKMYPPMSTQLEA---------------LG---------IDVYEGFD 58 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT-CEEE-EEESSCCTTHHHHHHH---------------TT---------CEEEESCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC-CEEE-EEcCCCCcHHHHHHHh---------------CC---------CEEECCCC
Confidence 38999999999995 888888885 6655 4453212222212211 01 11222234
Q ss_pred CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCC
Q 014424 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (425)
Q Consensus 169 p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGa 203 (425)
++++.+ .++|+|+-+.|.-.+.....++.+.|.
T Consensus 59 ~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi 91 (326)
T 3eag_A 59 AAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGL 91 (326)
T ss_dssp GGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTC
T ss_pred HHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCC
Confidence 544421 268999999998776665666777777
No 316
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=73.98 E-value=5.2 Score=41.02 Aligned_cols=33 Identities=24% Similarity=0.526 Sum_probs=29.3
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
..||+|-|||-||+.+++.|.+. ...||+|.|.
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~-GakVVavsD~ 253 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDA-GAKVIGISDA 253 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCEEEEEECS
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECC
Confidence 46999999999999999999877 4899999985
No 317
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=73.95 E-value=2.7 Score=40.79 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=24.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+||+|+|.|.+|..+...|.+.+ .+|..+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 59999999999999999888764 5665554
No 318
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=73.58 E-value=7.3 Score=38.10 Aligned_cols=30 Identities=30% Similarity=0.520 Sum_probs=24.3
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCc-eEEEE
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~-evvaI 119 (425)
++||+|+|.|.+|..++..|..++ + +|+-+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~-~~~v~l~ 35 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQ-LGDVVLF 35 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CceEEEE
Confidence 359999999999999998888775 4 66544
No 319
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=73.48 E-value=2.7 Score=40.68 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=25.6
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCC---ceEEEEcC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDD---VDVVAVND 121 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~---~evvaInd 121 (425)
+|||+|+|.|.+|..+.+.|.+... .+|...+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 4599999999999999999887641 56655543
No 320
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=73.40 E-value=5 Score=38.51 Aligned_cols=90 Identities=20% Similarity=0.229 Sum_probs=52.4
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
+|.|.| .|.||...++++.... .+++++.. +.+.+.++.++ |. . ..++ ..+.
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~---~~~~~~~~~~~----ga---~--------~~~~--------~~~~ 203 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKG-AHTIAVAS---TDEKLKIAKEY----GA---E--------YLIN--------ASKE 203 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHHHHT----TC---S--------EEEE--------TTTS
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHHHc----CC---c--------EEEe--------CCCc
Confidence 799999 8999999999988775 68877754 34444433321 21 0 1110 0011
Q ss_pred CC---C-C-CcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 170 AE---I-P-WGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 170 ~~---i-~-W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
+. + . .+..++|+||||+|. ...+.+-..++.|-+.|.+
T Consensus 204 ~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 204 DILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp CHHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEEC
T ss_pred hHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccCCEEEEE
Confidence 00 0 0 012479999999997 4555565666655433434
No 321
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=73.31 E-value=5.5 Score=39.31 Aligned_cols=31 Identities=19% Similarity=0.362 Sum_probs=24.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
+||+|+|.|.||..++..|..++.. +|+ +-|
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~-L~D 51 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELA-LVD 51 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEE-EEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEE-EEe
Confidence 4999999999999888888777533 554 445
No 322
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=73.09 E-value=3 Score=39.34 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=27.1
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+||-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 46 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVA 46 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeC
Confidence 35999999 9999999999999875 78887754
No 323
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=73.02 E-value=21 Score=37.42 Aligned_cols=32 Identities=19% Similarity=0.387 Sum_probs=28.2
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
-.+|+|-|||-||+..++.|.+. ...||+|.|
T Consensus 244 g~tVaVQG~GNVG~~aa~~L~e~-GakVVavsD 275 (501)
T 3mw9_A 244 DKTFVVQGFGNVGLHSMRYLHRF-GAKCITVGE 275 (501)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEc
Confidence 35899999999999999999887 478999876
No 324
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=73.01 E-value=5.9 Score=37.84 Aligned_cols=30 Identities=30% Similarity=0.378 Sum_probs=24.8
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|.| .|.||...++++.... .+++++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 699999 5999999999888775 67777655
No 325
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=72.91 E-value=3 Score=43.58 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=25.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|+|+|+|+||+.+++.|...+ ++|++.+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G-~~V~v~d 307 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLG-ATVWVTE 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998774 7876554
No 326
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=72.45 E-value=30 Score=33.04 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=27.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
.|+.|+|.|-+||.+++.|.+.. .+|.-+|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 38999999999999999999886 777666663
No 327
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=72.21 E-value=3.3 Score=39.44 Aligned_cols=32 Identities=19% Similarity=0.331 Sum_probs=27.2
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 35899999 8999999999999874 78887754
No 328
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=72.13 E-value=3.6 Score=39.82 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=26.0
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCc------eEEEEc
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDV------DVVAVN 120 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~------evvaIn 120 (425)
++||.|.| .|.||+.+++.|.+++.+ +|+.+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 46999999 799999999999887543 777664
No 329
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=71.96 E-value=1.6 Score=40.18 Aligned_cols=33 Identities=12% Similarity=0.071 Sum_probs=26.9
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|+.+|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDI 34 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTE-EEEEECCS
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 446899999 8999999999998874 67766644
No 330
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=71.88 E-value=5.6 Score=40.22 Aligned_cols=39 Identities=18% Similarity=0.153 Sum_probs=29.1
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
+|.|.| .|.||...++++...+ ..++++.. +.+.+.++.
T Consensus 231 ~VlV~GasG~vG~~avqlak~~G-a~vi~~~~---~~~~~~~~~ 270 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAGG-ANPICVVS---SPQKAEICR 270 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHcC-CeEEEEEC---CHHHHHHHH
Confidence 799999 5999999999888774 67777654 355554443
No 331
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=71.87 E-value=2.8 Score=38.63 Aligned_cols=39 Identities=13% Similarity=0.016 Sum_probs=27.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ay 131 (425)
|||+|+|.|.+|+.+.+.|.+.+..+|..+ +. +++....
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~-~r--~~~~~~~ 39 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIA-NR--GAEKRER 39 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEE-CS--SHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEE-CC--CHHHHHH
Confidence 389999999999999998876531455444 42 4554433
No 332
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=71.85 E-value=4.1 Score=39.25 Aligned_cols=83 Identities=20% Similarity=0.255 Sum_probs=51.0
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCCC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPA 170 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp~ 170 (425)
+|.|.|.|.||...++++.... .+|+++.. +.+.+.++.++ |. ...+ ...+.
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~l----Ga-----------~~~i--------~~~~~- 220 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAMG-LRVAAVDI---DDAKLNLARRL----GA-----------EVAV--------NARDT- 220 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEEES---CHHHHHHHHHT----TC-----------SEEE--------ETTTS-
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHHHHc----CC-----------CEEE--------eCCCc-
Confidence 7999999999999999988775 68887754 34444443321 10 0111 11111
Q ss_pred CCCCc------ccCcCEEEEccCcccCHHHHHHHHhCCC
Q 014424 171 EIPWG------DYGVDYVVESSGVFTTIAKASAHMKGGA 203 (425)
Q Consensus 171 ~i~W~------~~gvDiV~esTG~f~s~e~a~~hl~aGa 203 (425)
+|. ..++|+|||++|.....+.+-..++.|-
T Consensus 221 --~~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G 257 (340)
T 3s2e_A 221 --DPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGG 257 (340)
T ss_dssp --CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEE
T ss_pred --CHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCC
Confidence 110 1278999999987666666666665554
No 333
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=71.78 E-value=1.5 Score=36.93 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=27.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
.||+|+|+|.+|+.+++.|.++ .++ +.+.+. +.+..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~-v~v~~r--~~~~~ 57 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYK-VTVAGR--NIDHV 57 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCE-EEEEES--CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCE-EEEEcC--CHHHH
Confidence 4999999999999999988776 478 555553 44443
No 334
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=71.49 E-value=3.2 Score=40.63 Aligned_cols=31 Identities=29% Similarity=0.236 Sum_probs=25.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+||+|+|+|.+|+.+.+.|...+ ++|+..+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G-~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG-VDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc-CEEEEEEC
Confidence 48999999999999999998774 67664443
No 335
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=71.37 E-value=3.7 Score=39.33 Aligned_cols=40 Identities=13% Similarity=0.092 Sum_probs=29.3
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
-+|.|.| .|.||...++++.... .+++++.. +.+.+.++.
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~---~~~~~~~~~ 182 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG-AKLIGTVS---SPEKAAHAK 182 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEES---SHHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 3799999 8999999999888764 68877654 344444443
No 336
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=71.27 E-value=7.4 Score=37.84 Aligned_cols=30 Identities=27% Similarity=0.457 Sum_probs=24.8
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|+|.|.||...++++.... .+|+++..
T Consensus 182 ~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~ 211 (360)
T 1piw_A 182 KVGIVGLGGIGSMGTLISKAMG-AETYVISR 211 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEcC
Confidence 8999999999999999887664 57777753
No 337
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=70.70 E-value=5.1 Score=38.76 Aligned_cols=89 Identities=17% Similarity=0.166 Sum_probs=50.9
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
+|.|+| .|.||...++++.... .+|+++.. +.+.+.++.++ |. ...++.+. .+.+ ..
T Consensus 153 ~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~l----Ga-----------~~vi~~~~-~~~~--~~ 210 (346)
T 3fbg_A 153 TLLIINGAGGVGSIATQIAKAYG-LRVITTAS---RNETIEWTKKM----GA-----------DIVLNHKE-SLLN--QF 210 (346)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEECC---SHHHHHHHHHH----TC-----------SEEECTTS-CHHH--HH
T ss_pred EEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHHhc----CC-----------cEEEECCc-cHHH--HH
Confidence 799995 9999999999988775 68887754 35555444332 10 01111000 0000 00
Q ss_pred CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCC
Q 014424 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGa 203 (425)
.++ ...++|+||||+|.....+.+-..++.|-
T Consensus 211 ~~~--~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G 242 (346)
T 3fbg_A 211 KTQ--GIELVDYVFCTFNTDMYYDDMIQLVKPRG 242 (346)
T ss_dssp HHH--TCCCEEEEEESSCHHHHHHHHHHHEEEEE
T ss_pred HHh--CCCCccEEEECCCchHHHHHHHHHhccCC
Confidence 011 12479999999997555455555665554
No 338
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=70.68 E-value=3.6 Score=39.16 Aligned_cols=29 Identities=28% Similarity=0.318 Sum_probs=25.2
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+|.|+|.|.||...++++.... .+++++.
T Consensus 145 ~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~ 173 (315)
T 3goh_A 145 EVLIVGFGAVNNLLTQMLNNAG-YVVDLVS 173 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 8999999999999999887775 5888876
No 339
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=70.67 E-value=3.2 Score=39.21 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=26.8
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCC-CceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRD-DVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~-~~evvaInd 121 (425)
|||-|.| +|.||+.+++.|.+++ +.+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 4899999 9999999999998764 478887754
No 340
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=70.60 E-value=3.7 Score=39.60 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=27.2
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|+++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 56 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKG-YEVHGIVR 56 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 446899999 9999999999999875 78877754
No 341
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=70.54 E-value=3.3 Score=43.10 Aligned_cols=40 Identities=13% Similarity=0.182 Sum_probs=30.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
+||||+|+|.+|+.+.+.|.++. ++|+..+. +++.+..+.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~dr---~~~~~~~l~ 44 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHG-FVVCAFNR---TVSKVDDFL 44 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---STHHHHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 59999999999999999998875 78776643 455544444
No 342
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=70.40 E-value=1.9 Score=42.12 Aligned_cols=30 Identities=23% Similarity=0.480 Sum_probs=24.7
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|.|.|.||...++++.... .+++++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~ 212 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMG-HHVTVISS 212 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 7999999999999999887764 57776654
No 343
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=70.12 E-value=1.7 Score=45.17 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=26.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
+||+|+|.|.+|..+...|.+.+.+ +|+.++-
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~ 51 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQR 51 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 4999999999999999998887346 8776643
No 344
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=70.02 E-value=7.4 Score=37.78 Aligned_cols=30 Identities=37% Similarity=0.375 Sum_probs=24.7
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
+|.|+|.|.||...++++.... . +|+++..
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~ 204 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDL 204 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEECC
Confidence 7999999999999999887764 5 7776653
No 345
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=69.93 E-value=4.1 Score=34.86 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=26.0
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
|++.|+|+|-|..|-.....|..+. ++++-+.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G-~~V~v~E 32 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAG-HQVHLFD 32 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEE
Confidence 7789999999999999998888774 7766554
No 346
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=69.69 E-value=5.6 Score=38.68 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=24.9
Q ss_pred eeEEEEccChHHHHH-HHHH-HcCCCce-EEEEcC
Q 014424 90 TKVGINGFGRIGRLV-LRVA-AFRDDVD-VVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~v-lr~l-~~~~~~e-vvaInd 121 (425)
-+|.|+|.|.||... ++++ .... .+ |+++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeC
Confidence 389999999999999 9888 6654 55 777754
No 347
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=69.65 E-value=3.3 Score=40.83 Aligned_cols=39 Identities=18% Similarity=0.272 Sum_probs=28.7
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
+|.|+|.|.||...++++....-.+|+++.. +.+.+.++
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~ 236 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLA 236 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHH
Confidence 7999999999999999888774247777753 34444444
No 348
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=69.62 E-value=6.5 Score=38.51 Aligned_cols=30 Identities=23% Similarity=0.432 Sum_probs=24.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
-+|.|.|.|.||...++++.... . +|+++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG-ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999999887664 5 677764
No 349
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=69.53 E-value=16 Score=34.92 Aligned_cols=89 Identities=24% Similarity=0.235 Sum_probs=49.7
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC-
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP- 169 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp- 169 (425)
+|.|.|.|.+|...++++.....-.++++ +. +.+.+.++.++ |. + ..++- .+.+.
T Consensus 163 ~VlV~GaG~vG~~aiq~ak~~G~~~vi~~-~~--~~~k~~~a~~l----Ga---~--------~~i~~------~~~~~~ 218 (346)
T 4a2c_A 163 NVIIIGAGTIGLLAIQCAVALGAKSVTAI-DI--SSEKLALAKSF----GA---M--------QTFNS------SEMSAP 218 (346)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEE-ES--CHHHHHHHHHT----TC---S--------EEEET------TTSCHH
T ss_pred EEEEECCCCcchHHHHHHHHcCCcEEEEE-ec--hHHHHHHHHHc----CC---e--------EEEeC------CCCCHH
Confidence 79999999999999988887753334444 32 34444333332 11 0 01100 00000
Q ss_pred ---CCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCC
Q 014424 170 ---AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAK 204 (425)
Q Consensus 170 ---~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGak 204 (425)
..+. ...++|+||||+|.....+.+-..++.|-+
T Consensus 219 ~~~~~~~-~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~ 255 (346)
T 4a2c_A 219 QMQSVLR-ELRFNQLILETAGVPQTVELAVEIAGPHAQ 255 (346)
T ss_dssp HHHHHHG-GGCSSEEEEECSCSHHHHHHHHHHCCTTCE
T ss_pred HHHHhhc-ccCCcccccccccccchhhhhhheecCCeE
Confidence 0000 124789999999977666666666655543
No 350
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=69.32 E-value=4.3 Score=38.28 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=26.7
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||-|.| +|.||+.+++.|.+++..+|+++..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 899999 8999999999999874478887765
No 351
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=69.22 E-value=3.8 Score=42.14 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=29.6
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
++||||+|+|.+|+.+.+.|.+++ ++|...+. +.+....+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G-~~V~v~dr---~~~~~~~l 44 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG-YTVAIYNR---TTSKTEEV 44 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---SHHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC-CEEEEEcC---CHHHHHHH
Confidence 369999999999999999998874 67665543 45544333
No 352
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=69.18 E-value=3.9 Score=39.98 Aligned_cols=29 Identities=24% Similarity=0.242 Sum_probs=23.5
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
+|.|+|.|.||...++++.... . .|+++.
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~ 222 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVCG-ASIIIAVD 222 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 8999999999999998887664 4 566664
No 353
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=69.11 E-value=4 Score=42.05 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=25.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
.+|+|+|+|+||+.+.+.|...+ ++|+. .|+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G-a~Viv-~D~ 242 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG-ARVVV-TEV 242 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEE-ECC
Confidence 58999999999999999998874 77654 443
No 354
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=69.05 E-value=4 Score=42.39 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=24.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaI 119 (425)
.+|+|+|+|+||+.+++.+...+ ++|+..
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEE
Confidence 48999999999999999998774 776644
No 355
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=69.02 E-value=3.1 Score=43.28 Aligned_cols=30 Identities=20% Similarity=0.199 Sum_probs=25.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|+|+|+|+||+.+++.|...+ ++|++.+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G-~~Viv~d 287 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLG-ARVYITE 287 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCc-CEEEEEe
Confidence 48999999999999999998764 7877654
No 356
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=68.72 E-value=5.2 Score=39.43 Aligned_cols=23 Identities=22% Similarity=0.245 Sum_probs=19.9
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRD 112 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~ 112 (425)
+||+|.| .|.||..++..|..++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~ 27 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGS 27 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCC
Confidence 5999999 8999999998887653
No 357
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=68.70 E-value=7.3 Score=37.54 Aligned_cols=30 Identities=33% Similarity=0.483 Sum_probs=25.1
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|.|.|.||...++++.... .+|+++..
T Consensus 167 ~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~ 196 (339)
T 1rjw_A 167 WVAIYGIGGLGHVAVQYAKAMG-LNVVAVDI 196 (339)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 8999999889999999988775 58777653
No 358
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=68.51 E-value=3.7 Score=41.54 Aligned_cols=39 Identities=18% Similarity=0.392 Sum_probs=29.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
|||+|+|+|.+|..+...|.+.+ .+|+.++- +.+.+..+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G-~~V~~~d~---~~~~~~~l 39 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG-HEVIGVDV---SSTKIDLI 39 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEECS---CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEC---CHHHHHHH
Confidence 38999999999999999998874 67776642 55555443
No 359
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=68.43 E-value=6.6 Score=38.34 Aligned_cols=29 Identities=14% Similarity=0.282 Sum_probs=23.6
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
+|.|.|.|.||...++++.... . +|+++.
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 223 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAAG-ASRIIGVG 223 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 8999999999999998887664 4 676664
No 360
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=68.35 E-value=4.5 Score=38.06 Aligned_cols=31 Identities=26% Similarity=0.366 Sum_probs=26.6
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 9999999999999875 78877754
No 361
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=68.28 E-value=2.7 Score=41.36 Aligned_cols=24 Identities=25% Similarity=0.361 Sum_probs=20.5
Q ss_pred CceeEEEEccChHHHHHHHHHHcC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFR 111 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~ 111 (425)
|++||+|+|.|.+|..+.+.|.+.
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc
Confidence 346999999999999999888754
No 362
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=68.12 E-value=5.9 Score=38.51 Aligned_cols=31 Identities=26% Similarity=0.223 Sum_probs=26.8
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 61 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEG-HYVIASDW 61 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEECCccHHHHHHHHHHHHCC-CeEEEEEC
Confidence 5899999 8999999999999875 78887754
No 363
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=68.10 E-value=3.7 Score=42.84 Aligned_cols=94 Identities=16% Similarity=0.226 Sum_probs=53.8
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCc---eEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDV---DVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~---evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
+.||.|+|+|-||+.+++.+.+++++ +|+-+ |+......+.-.+ | ++. . .+.+.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~~~~~~------g-----~~~------~----~~~Vd- 69 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVDVAQQY------G-----VSF------K----LQQIT- 69 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCCHHHHH------T-----CEE------E----ECCCC-
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhhHHhhc------C-----Cce------e----EEecc-
Confidence 45999999999999999999988766 45533 4311111110000 1 000 0 00010
Q ss_pred cCC----CCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 166 KRD----PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 166 ~~d----p~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
..+ .+.+ -. .+ |+|+.++-.+.+...+.+.+++|+--+..
T Consensus 70 adnv~~~l~aL-l~-~~-DvVIN~s~~~~~l~Im~acleaGv~YlDT 113 (480)
T 2ph5_A 70 PQNYLEVIGST-LE-EN-DFLIDVSIGISSLALIILCNQKGALYINA 113 (480)
T ss_dssp TTTHHHHTGGG-CC-TT-CEEEECCSSSCHHHHHHHHHHHTCEEEES
T ss_pred chhHHHHHHHH-hc-CC-CEEEECCccccCHHHHHHHHHcCCCEEEC
Confidence 000 1111 12 23 99999887777888899999999943333
No 364
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=67.98 E-value=5 Score=38.27 Aligned_cols=31 Identities=29% Similarity=0.387 Sum_probs=24.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
+||+|+|.|.+|..+...|...+.+ +|+.+.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d 39 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLED 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 4999999999999999888876422 666453
No 365
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=67.73 E-value=4.4 Score=40.50 Aligned_cols=31 Identities=26% Similarity=0.409 Sum_probs=27.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
.+|+|.|||.||+.+++.|.+.. ..|+ +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~G-akVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAG-AQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 48999999999999999998884 8888 8885
No 366
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=67.72 E-value=11 Score=36.62 Aligned_cols=94 Identities=22% Similarity=0.219 Sum_probs=50.2
Q ss_pred eEEEEccChHHHHHHHHHHcCCCce-EEEEcCCCCChHHHhHhhhc-ccccCCccceEEEeCCCeEEECCE-EEEEEecC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVD-VVAVNDPFIDAKYMAYMFKY-DSTHGVFKGTINVVDDSTLEINGK-LIKVFSKR 167 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~e-vvaInd~~~~~~~~ayll~y-DS~~g~f~~~v~~~~~~~l~i~Gk-~I~v~~~~ 167 (425)
+|.|+|.|.||...++++.... .. |+++.. +.+.+.++.++ |. .+.. .++.. .-.+. +
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~---~~~~~~~a~~l~~~-------~~~~------~~~~~~~~~~~-~- 242 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAAG-ACPLVITDI---DEGRLKFAKEICPE-------VVTH------KVERLSAEESA-K- 242 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEES---CHHHHHHHHHHCTT-------CEEE------ECCSCCHHHHH-H-
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEECC---CHHHHHHHHHhchh-------cccc------cccccchHHHH-H-
Confidence 7999999999999999888774 55 665543 34444333321 10 0110 00000 00000 0
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCC
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAK 204 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGak 204 (425)
...++ .+..++|+||||+|.-...+.+-..++.|-+
T Consensus 243 ~v~~~-t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~ 278 (363)
T 3m6i_A 243 KIVES-FGGIEPAVALECTGVESSIAAAIWAVKFGGK 278 (363)
T ss_dssp HHHHH-TSSCCCSEEEECSCCHHHHHHHHHHSCTTCE
T ss_pred HHHHH-hCCCCCCEEEECCCChHHHHHHHHHhcCCCE
Confidence 00000 0124899999999976555666666666653
No 367
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=67.39 E-value=4.5 Score=38.72 Aligned_cols=32 Identities=19% Similarity=0.354 Sum_probs=26.5
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|.|.| +|.||+.+++.|.+++..+|+++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 5899999 8999999999999875467777754
No 368
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=67.36 E-value=3.9 Score=38.92 Aligned_cols=29 Identities=21% Similarity=0.121 Sum_probs=24.1
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
||+|+|.|.+|..+.+.|.+.. .+|..++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~ 30 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNG-NEVRIWG 30 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHC-CEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 8999999999999999887764 5766554
No 369
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=67.14 E-value=4.1 Score=39.49 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=21.6
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
||+|+|.|.+|..++-.+..++ + +|+ +-|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~-l~el~-L~D 30 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRG-YDDLL-LIA 30 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CSCEE-EEC
T ss_pred CEEEECcCHHHHHHHHHHHhCC-CCEEE-EEc
Confidence 7999999999998887776553 4 454 334
No 370
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=67.10 E-value=7.9 Score=37.83 Aligned_cols=29 Identities=14% Similarity=0.352 Sum_probs=24.2
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
+|.|.|.|.||...++++.... . +|+++.
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 227 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIAG-ASRIIAID 227 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 8999999999999999888774 5 677664
No 371
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=67.02 E-value=11 Score=36.85 Aligned_cols=29 Identities=17% Similarity=0.355 Sum_probs=24.3
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
+|.|+|.|.||...++++.... . .|+++.
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 223 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAG-AARIIGVD 223 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 8999999999999999888774 5 677664
No 372
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=66.96 E-value=4.3 Score=39.48 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=24.7
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
+++||+|+|.|.||..++..|..++-+ +|+ +-|
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~-L~D 38 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELV-IID 38 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEE-EEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEe
Confidence 356999999999999988888766432 454 445
No 373
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=66.90 E-value=11 Score=36.90 Aligned_cols=29 Identities=10% Similarity=0.062 Sum_probs=24.4
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEc
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+|.|+| .|.||...++++.... .+++++.
T Consensus 167 ~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~~ 196 (371)
T 3gqv_A 167 YVLVYGGSTATATVTMQMLRLSG-YIPIATC 196 (371)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 799999 5999999999988775 6887774
No 374
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=66.83 E-value=4.2 Score=42.22 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=31.3
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
-|..||||+|.|.+|..+.+.|.++. ++|+..|. +++.+..+
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~dr---~~~~~~~l 49 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHG-FTVCAYNR---TQSKVDHF 49 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---SSHHHHHH
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHH
Confidence 46679999999999999999998874 78766654 34444333
No 375
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=66.60 E-value=5.2 Score=40.99 Aligned_cols=40 Identities=23% Similarity=0.174 Sum_probs=29.9
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
++||+|+|.|.+|..+...|.+ .++|++++- +.+.+..+-
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~---~~~~v~~l~ 75 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVALDI---VQAKVDMLN 75 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEECS---CHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEEec---CHHHhhHHh
Confidence 3599999999999999988775 488877643 566554443
No 376
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=66.51 E-value=10 Score=38.22 Aligned_cols=24 Identities=21% Similarity=0.257 Sum_probs=20.5
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRD 112 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~ 112 (425)
++||+|.| .|.||..++-.|..++
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~ 56 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGE 56 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHcCC
Confidence 47999999 8999999888887664
No 377
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=66.41 E-value=5.1 Score=37.77 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=26.5
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-IDLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 9999999999999874 78887753
No 378
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=66.39 E-value=4.6 Score=41.67 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=30.9
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
+.||||+|.|.+|+.+.+.|.++. ++|+..|. +++....+.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~~r---~~~~~~~l~ 55 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRG-YTVSIFNR---SREKTEEVI 55 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTT-CCEEEECS---SHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCC-CeEEEEeC---CHHHHHHHH
Confidence 569999999999999999998874 78766654 455544443
No 379
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=66.36 E-value=4.1 Score=40.92 Aligned_cols=36 Identities=19% Similarity=0.099 Sum_probs=30.7
Q ss_pred CCCCCceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 84 SRSDGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 84 ~~~~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
++.||+.||.|.|-|.+|+.++|++.+.+ ++++++.
T Consensus 1 ~n~m~~~kiLI~g~g~~a~~i~~aa~~~G-~~~v~v~ 36 (446)
T 3ouz_A 1 SNAMEIKSILIANRGEIALRALRTIKEMG-KKAICVY 36 (446)
T ss_dssp -CTTCCCEEEECCCHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCccccceEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 35677779999999999999999999884 8988884
No 380
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=66.29 E-value=7.9 Score=38.08 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=24.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
+||+|+|.|.||..++..|..++-+ +|+ +-|
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~-l~D 41 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIG-IVD 41 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEe
Confidence 4999999999999999988877544 555 445
No 381
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=65.85 E-value=3.6 Score=39.75 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=20.4
Q ss_pred ceeEEEEccChHHHHHHHHHHcC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFR 111 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~ 111 (425)
++||+|+|.|.+|..+.+.|.+.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 46999999999999999988765
No 382
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=65.79 E-value=3.3 Score=37.65 Aligned_cols=30 Identities=23% Similarity=0.176 Sum_probs=24.6
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
..+|.|.|+|++|+.+++.|.+++ . ++.|.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g-~-v~vid 38 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE-V-FVLAE 38 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE-E-EEEES
T ss_pred CCEEEEECCChHHHHHHHHHHhCC-e-EEEEE
Confidence 458999999999999999998774 5 77664
No 383
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=65.68 E-value=5.7 Score=37.73 Aligned_cols=31 Identities=32% Similarity=0.468 Sum_probs=26.7
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 9999999999999875 78877754
No 384
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=65.66 E-value=3.5 Score=42.37 Aligned_cols=93 Identities=20% Similarity=0.235 Sum_probs=54.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECC--EEEEEEecC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEING--KLIKVFSKR 167 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~G--k~I~v~~~~ 167 (425)
-||-|.|-|+||..+++.|.++ +++.-|.. +.+..-++-. .+ ++.++++| ....++.+
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~--~~v~iIE~---d~~r~~~la~------~l--------~~~~Vi~GD~td~~~L~e- 295 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT--YSVKLIER---NLQRAEKLSE------EL--------ENTIVFCGDAADQELLTE- 295 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEEEEES---CHHHHHHHHH------HC--------TTSEEEESCTTCHHHHHH-
T ss_pred cEEEEEcchHHHHHHHHHhhhc--CceEEEec---CHHHHHHHHH------HC--------CCceEEeccccchhhHhh-
Confidence 3899999999999999998654 56665644 3443322211 11 12344444 11122222
Q ss_pred CCCCCCCcccCcCEEEEccCcccC-HHHHHHHHhCCCCEEEE
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTT-IAKASAHMKGGAKKVVI 208 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s-~e~a~~hl~aGakkVVI 208 (425)
+.+ ..+|+++-+|+.... .-.+-.+.+-|++|++.
T Consensus 296 --e~i----~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 296 --ENI----DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp --TTG----GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --cCc----hhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 122 368999999987642 22333344579998876
No 385
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=65.34 E-value=4.6 Score=41.63 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=29.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
|||||+|.|.+|+.+.+.|.+++ ++|...+. +.+....+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~v~dr---~~~~~~~l 40 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVAVFNR---TYSKSEEF 40 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---SHHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHH
Confidence 38999999999999999998874 67665543 45544333
No 386
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=65.09 E-value=4.8 Score=41.45 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=25.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+||+|+|+|.+|+.+.+.|.+++ ++|...+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G-~~V~v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG-FVVCAFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC-CeEEEEeC
Confidence 48999999999999999998874 67665543
No 387
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=64.86 E-value=5.8 Score=36.92 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=26.4
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|||-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 3899999 8999999999999885 68877754
No 388
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=64.83 E-value=21 Score=36.45 Aligned_cols=94 Identities=12% Similarity=0.013 Sum_probs=55.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecCCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~dp 169 (425)
.+|-|+|.|.+|...++.|.+.+ -+|..|. +...++ +..+.+ . +.+.+. ..+.++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~-~~~~~~-~~~l~~--~------~~i~~~--------------~~~~~~ 67 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNA-LTFIPQ-FTVWAN--E------GMLTLV--------------EGPFDE 67 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEE-SSCCHH-HHHHHT--T------TSCEEE--------------ESSCCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEc-CCCCHH-HHHHHh--c------CCEEEE--------------ECCCCc
Confidence 48999999999999999999875 5555444 323332 222221 0 011111 112233
Q ss_pred CCCCCcccCcCEEEEccCcc-cCHHHHHHHHhCCCCEEEEeCCC
Q 014424 170 AEIPWGDYGVDYVVESSGVF-TTIAKASAHMKGGAKKVVISAPS 212 (425)
Q Consensus 170 ~~i~W~~~gvDiV~esTG~f-~s~e~a~~hl~aGakkVVISaps 212 (425)
+.+ .++|+||=|||.- .+...+..+.+.|...-+++.|.
T Consensus 68 ~~l----~~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 68 TLL----DSCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp GGG----TTCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ccc----CCccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcc
Confidence 334 2789999999986 45555556666777544455553
No 389
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=64.46 E-value=10 Score=36.46 Aligned_cols=31 Identities=13% Similarity=0.134 Sum_probs=25.2
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
-+|.|.| .|.||+.+++++.... .+++++..
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~ 199 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAG 199 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEeC
Confidence 3899999 5999999999998775 57776643
No 390
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=64.32 E-value=7.5 Score=36.94 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=25.1
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|.| .|.||...++++.... .+|+++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG-YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC-CEEEEEeC
Confidence 489999 5999999999988775 68887764
No 391
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=64.26 E-value=12 Score=37.06 Aligned_cols=95 Identities=23% Similarity=0.275 Sum_probs=56.4
Q ss_pred eeEEEEc-cChHHHHHHHH--HHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCE--EEEEE
Q 014424 90 TKVGING-FGRIGRLVLRV--AAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGK--LIKVF 164 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~--l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk--~I~v~ 164 (425)
+||-|.| +|+.++.+++. +.++++.++|+.-+|...- || .++.++.+ -++++
T Consensus 11 tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g------------~~-----------~~v~~G~~~~Gvpvy 67 (334)
T 3mwd_B 11 TKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGD------------HK-----------QKFYWGHKEILIPVF 67 (334)
T ss_dssp CCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCS------------EE-----------EEEEETTEEEEEEEE
T ss_pred CeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCC------------cc-----------ceEeccCccCCceee
Confidence 5999999 79999888877 5567789999988762110 00 01212222 24455
Q ss_pred ecCCCCCCCCccc-CcCEEEEccCcccCHHHHHHHHh-CCCCEEEE-eC
Q 014424 165 SKRDPAEIPWGDY-GVDYVVESSGVFTTIAKASAHMK-GGAKKVVI-SA 210 (425)
Q Consensus 165 ~~~dp~~i~W~~~-gvDiV~esTG~f~s~e~a~~hl~-aGakkVVI-Sa 210 (425)
. +.++++ ... ++|+++.++......+.+...+. +|.|.+|+ |.
T Consensus 68 ~--sv~ea~-~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~ 113 (334)
T 3mwd_B 68 K--NMADAM-RKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAE 113 (334)
T ss_dssp S--SHHHHH-HHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCS
T ss_pred C--CHHHHh-hcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 2 222221 011 58999998866444444445555 88887777 43
No 392
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=63.91 E-value=7.5 Score=36.86 Aligned_cols=32 Identities=13% Similarity=0.320 Sum_probs=27.0
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 35899999 8999999999999875 78877754
No 393
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=63.86 E-value=5.8 Score=40.84 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=24.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaI 119 (425)
.+|+|+|+|.||+.+++.|...+ ++|+..
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G-a~Viv~ 249 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG-SIVYVT 249 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEE
Confidence 48999999999999999998774 776544
No 394
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=63.65 E-value=6.5 Score=38.10 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=27.0
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|.|.| +|.||+.+++.|.+++..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 4899999 9999999999999874368887754
No 395
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=63.48 E-value=12 Score=36.91 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=24.4
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
+|.|+|.|.||...++++.... . .|+++..
T Consensus 188 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~ 218 (398)
T 2dph_A 188 HVYIAGAGPVGRCAAAGARLLG-AACVIVGDQ 218 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CSEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEcC
Confidence 8999999999999998887664 5 6776653
No 396
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=63.42 E-value=12 Score=40.94 Aligned_cols=146 Identities=23% Similarity=0.305 Sum_probs=76.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhc-----c--cccCCccceEEEeCCCeEEECCEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKY-----D--STHGVFKGTINVVDDSTLEINGKLIK 162 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~y-----D--S~~g~f~~~v~~~~~~~l~i~Gk~I~ 162 (425)
-||||+|.|.+|..+...+... .++|+ +-|. +++.+....++ + -..++....... . ..+.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~~V~-l~D~--~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~-------~--~~~~ 383 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GISVV-AVES--DPKQLDAAKKIITFTLEKEASRAHQNGQASA-------K--PKLR 383 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEE-EECS--SHHHHHHHHHHHHHHHHHHHHHHHTTTCCCC-------C--CCEE
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CCchh-cccc--hHhhhhhHHHHHHHHHHHHHHhccccchhhh-------h--hhhc
Confidence 4899999999999999888877 48876 4453 44433222211 0 000110000000 0 1122
Q ss_pred EEecCCCCCCCCcccCcCEEEEccCcccCH-----HHHHHHHhCCCCEEEEeCCCC----------CCCcEEeec---Cc
Q 014424 163 VFSKRDPAEIPWGDYGVDYVVESSGVFTTI-----AKASAHMKGGAKKVVISAPSA----------DAPMFVVGV---NE 224 (425)
Q Consensus 163 v~~~~dp~~i~W~~~gvDiV~esTG~f~s~-----e~a~~hl~aGakkVVISaps~----------Dvp~vV~gV---N~ 224 (425)
.. .+.+.+ .++|+|+||.-.-... +....++..++ ++-||.|. +-|--+.|. |+
T Consensus 384 ~~--~~~~~l----~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP 455 (742)
T 3zwc_A 384 FS--SSTKEL----STVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHFFSP 455 (742)
T ss_dssp EE--SCGGGG----GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEECCSS
T ss_pred cc--CcHHHH----hhCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccccCC
Confidence 22 233444 4899999997332221 12234445555 88899871 245333333 33
Q ss_pred cccCCCCcEEecCCchhhhHHhHHHHHHhhcCe
Q 014424 225 KTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGI 257 (425)
Q Consensus 225 ~~~~~~~~IISnaSCTTn~Lap~lk~L~d~fGI 257 (425)
-.+-+--.||..+..+...+.-+.... +..|-
T Consensus 456 ~~~m~LVEvi~g~~Ts~e~~~~~~~~~-~~lgK 487 (742)
T 3zwc_A 456 AHVMRLLEVIPSRYSSPTTIATVMSLS-KKIGK 487 (742)
T ss_dssp TTTCCEEEEEECSSCCHHHHHHHHHHH-HHTTC
T ss_pred CCCCceEEEecCCCCCHHHHHHHHHHH-HHhCC
Confidence 332222357877777777776666544 44553
No 397
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=63.41 E-value=7.3 Score=36.74 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=26.9
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+++|-|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEec
Confidence 45899999 9999999999999884 77777643
No 398
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=63.41 E-value=11 Score=36.61 Aligned_cols=29 Identities=17% Similarity=0.332 Sum_probs=24.3
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
+|.|+|.|.||...++++.... . .|+++.
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 224 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSAG-AKRIIAVD 224 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 7999999999999999888774 5 677664
No 399
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=63.17 E-value=13 Score=37.33 Aligned_cols=39 Identities=26% Similarity=0.146 Sum_probs=28.8
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
-+|.|.| .|.||...++++.... .+++++.. +.+.+..+
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~---~~~~~~~~ 261 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVS---SAQKEAAV 261 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHH
Confidence 3799999 5999999999988775 67776653 35554444
No 400
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=62.99 E-value=9.2 Score=38.23 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=29.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
.+|+|.|+|.||+.+++.|.+.. .+|+ +.|+ +++.+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G-akVv-v~D~--~~~~l 209 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG-AKLV-VTDV--NKAAV 209 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS--CHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEE-EEcC--CHHHH
Confidence 48999999999999999999885 7887 7774 55543
No 401
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=62.88 E-value=9.4 Score=37.16 Aligned_cols=29 Identities=17% Similarity=0.373 Sum_probs=23.9
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
+|.|+|.|.||...++++.... . .|+++.
T Consensus 193 ~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~ 222 (373)
T 2fzw_A 193 VCAVFGLGGVGLAVIMGCKVAG-ASRIIGVD 222 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 7999999999999999887664 5 677664
No 402
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=62.13 E-value=6.4 Score=38.30 Aligned_cols=32 Identities=31% Similarity=0.370 Sum_probs=26.9
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 35899999 9999999999998874 78877654
No 403
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=62.10 E-value=6.7 Score=38.39 Aligned_cols=31 Identities=32% Similarity=0.427 Sum_probs=25.5
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
-+|.|.| .|.||...++++.... .+|+++..
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~~ 216 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD-AHVTAVCS 216 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 3899999 8999999999988775 67777653
No 404
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=62.06 E-value=7.3 Score=35.93 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=26.6
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.||-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 44 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN-VEVIPTDV 44 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS-EEEEEECT
T ss_pred ceEEEECCCChHHHHHHHHHHhCC-CeEEeccC
Confidence 4999999 9999999999999874 78887753
No 405
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=61.91 E-value=6.3 Score=36.84 Aligned_cols=30 Identities=20% Similarity=0.412 Sum_probs=24.9
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ .++.+..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEc
Confidence 4899999 9999999999999886 6666654
No 406
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=61.60 E-value=7.8 Score=38.33 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=28.7
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
++||+|+|.|.+|..+...|.+.. .+|..++. +++.+..+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~~r---~~~~~~~i 68 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLWSY---ESDHVDEM 68 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEECS---CHHHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHH
Confidence 359999999999999999998764 56554432 45544333
No 407
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=61.54 E-value=5.9 Score=37.72 Aligned_cols=31 Identities=32% Similarity=0.398 Sum_probs=26.2
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||-|.| +|.||+.+++.|.+++..+|+++..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 899999 8999999999998864578877754
No 408
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=61.52 E-value=3.5 Score=39.86 Aligned_cols=29 Identities=17% Similarity=0.417 Sum_probs=24.1
Q ss_pred eEEEEccChHHHHHHHHHHcC--CCceEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFR--DDVDVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~--~~~evvaIn 120 (425)
+|.|+|.|.||...++++... . .+|+++.
T Consensus 173 ~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~ 203 (344)
T 2h6e_A 173 VVIVNGIGGLAVYTIQILKALMKN-ITIVGIS 203 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTT-CEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHhcCC-CEEEEEe
Confidence 899999999999999888765 4 6777664
No 409
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=61.40 E-value=6.8 Score=40.22 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=27.0
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R 179 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGG-HEVIQLVR 179 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 4999999 9999999999999885 68887765
No 410
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=61.38 E-value=5 Score=39.14 Aligned_cols=31 Identities=29% Similarity=0.275 Sum_probs=25.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
-+|.|+|.|.||..+++++.... .+|+++..
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 212 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYG-LEVWMANR 212 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 38999999999999999888775 58777754
No 411
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=61.25 E-value=6.9 Score=40.32 Aligned_cols=40 Identities=20% Similarity=0.185 Sum_probs=30.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
|||+|+|.|.+|..+...|.+.. .+|+.++- +.+.+..+-
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G-~~V~~~d~---~~~~v~~l~ 48 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIG-HDVFCLDV---DQAKIDILN 48 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHhCC-CEEEEEEC---CHHHHHHHH
Confidence 39999999999999999888774 68776643 556554443
No 412
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=60.27 E-value=8 Score=36.12 Aligned_cols=31 Identities=19% Similarity=0.337 Sum_probs=26.5
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 44 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQN-VEVFGTSR 44 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred ceEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 4899999 9999999999999875 68877754
No 413
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=59.93 E-value=7.3 Score=39.01 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=28.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ay 131 (425)
|||+|+|.|.+|..+...|.+ . .+|+.++- +.+.+..
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G-~~V~~~d~---~~~~~~~ 37 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q-NEVTIVDI---LPSKVDK 37 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T-SEEEEECS---CHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-C-CEEEEEEC---CHHHHHH
Confidence 389999999999999988876 4 78776643 4554433
No 414
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=59.84 E-value=7.7 Score=37.35 Aligned_cols=32 Identities=28% Similarity=0.408 Sum_probs=24.8
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++||+|+|.|.+|..++..|..++..+|+ +-|
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~-l~D 35 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVV-LFD 35 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEE-EEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEE-EEe
Confidence 35999999999999999988876533754 444
No 415
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=59.65 E-value=9.7 Score=36.95 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=29.0
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
-+|.|+| .|.||...++++...+ .+|+++.. +.+.+..+
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~---~~~~~~~~ 208 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAFG-AEVYATAG---STGKCEAC 208 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHH
Confidence 3799996 9999999999998775 68777753 34444444
No 416
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=59.51 E-value=6.7 Score=37.12 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=26.5
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCC-CceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRD-DVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~-~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ ..+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 4899999 9999999999998762 478877754
No 417
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=59.45 E-value=6.6 Score=35.13 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=26.4
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++.+ +|+++..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 5899999 999999999999988643 7776654
No 418
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=59.33 E-value=8.4 Score=36.72 Aligned_cols=31 Identities=29% Similarity=0.287 Sum_probs=26.6
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLD-QKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 5899999 8999999999999875 68877754
No 419
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=59.27 E-value=7.1 Score=38.03 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=24.8
Q ss_pred CceeEEEEc-cChHHHHHHHHHHcCCC-ceEEEEc
Q 014424 88 GNTKVGING-FGRIGRLVLRVAAFRDD-VDVVAVN 120 (425)
Q Consensus 88 m~ikVaInG-fGrIGr~vlr~l~~~~~-~evvaIn 120 (425)
+++||+|.| .|.||..++..|.+++. -+|+.+.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~D 41 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYD 41 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEe
Confidence 346999999 89999999998887642 3565553
No 420
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=59.06 E-value=7.7 Score=37.43 Aligned_cols=40 Identities=8% Similarity=0.045 Sum_probs=30.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
.|||++|.|.+|+.+.+-|.+.. ++|..-|. +++....+.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G-~~v~v~dr---~~~~~~~l~ 43 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAG-YLLNVFDL---VQSAVDGLV 43 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEECS---SHHHHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCC-CeEEEEcC---CHHHHHHHH
Confidence 39999999999999999998874 77765543 455554443
No 421
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=59.04 E-value=8.8 Score=39.25 Aligned_cols=32 Identities=31% Similarity=0.437 Sum_probs=29.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
.+|+|-|||-+|+.+++.|.+. ...||+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~-GakVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKM-GAKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEECC
Confidence 5899999999999999999887 5999999985
No 422
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=58.98 E-value=7.9 Score=36.03 Aligned_cols=29 Identities=24% Similarity=0.162 Sum_probs=24.1
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
||+|+|+|.+|+.+++.|.+.+ ++|...+
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v~v~~ 146 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEVWVWN 146 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 8999999999999999998875 5655444
No 423
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=58.71 E-value=12 Score=36.40 Aligned_cols=40 Identities=23% Similarity=0.161 Sum_probs=30.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
.||||+|.|.+|..+...+...+ ++|+.. |+ +++.+..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G-~~V~l~-d~--~~~~~~~~~ 46 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG-FRVKLY-DI--EPRQITGAL 46 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--CHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC-CEEEEE-eC--CHHHHHHHH
Confidence 48999999999999999988874 776655 43 566554443
No 424
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=58.28 E-value=9.6 Score=35.52 Aligned_cols=30 Identities=23% Similarity=0.427 Sum_probs=25.7
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 32 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARG-LEVAVLDN 32 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT-CEEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 899999 8999999999999874 68877643
No 425
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=58.02 E-value=7.7 Score=35.83 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=25.2
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||.|.| +|.||+.+++.|. + ..+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r 31 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-VGNLIALDV 31 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-TSEEEEECT
T ss_pred eEEEECCCCHHHHHHHHHhh-c-CCeEEEecc
Confidence 899999 8999999999998 6 478887754
No 426
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=57.88 E-value=9.6 Score=35.21 Aligned_cols=31 Identities=19% Similarity=0.368 Sum_probs=25.9
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||-|.| +|.||+.+++.|.+++..+|+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc
Confidence 578999 8999999999999885467777755
No 427
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=57.48 E-value=5.3 Score=38.20 Aligned_cols=30 Identities=30% Similarity=0.444 Sum_probs=24.5
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|.| .|.||...++++.... .+++++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~ 183 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTG 183 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 699999 5999999999887764 67777654
No 428
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=57.45 E-value=14 Score=36.30 Aligned_cols=39 Identities=5% Similarity=0.167 Sum_probs=28.1
Q ss_pred eEEEE--ccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhh
Q 014424 91 KVGIN--GFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (425)
Q Consensus 91 kVaIn--GfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll 133 (425)
+|.|+ |.|.||...++++.... .+++++.. +.+.+.++.
T Consensus 173 ~vlV~gag~G~vG~~a~q~a~~~G-a~Vi~~~~---~~~~~~~~~ 213 (379)
T 3iup_A 173 SALVHTAAASNLGQMLNQICLKDG-IKLVNIVR---KQEQADLLK 213 (379)
T ss_dssp SCEEESSTTSHHHHHHHHHHHHHT-CCEEEEES---SHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHCC-CEEEEEEC---CHHHHHHHH
Confidence 68898 79999999998887764 68877753 345444443
No 429
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=57.08 E-value=11 Score=36.21 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=27.2
Q ss_pred ceeEEEEc-cChHHHHHHHHHHc--CCCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAF--RDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~--~~~~evvaInd 121 (425)
+++|-|.| +|.||+.+++.|.+ + ..+|+++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~-g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHP-KAKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCT-TSEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCC-CCeEEEEEC
Confidence 35899999 99999999999998 5 578887754
No 430
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=57.07 E-value=9 Score=38.03 Aligned_cols=31 Identities=23% Similarity=0.206 Sum_probs=25.8
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|+|+|+|.||+.+++.+...+ ++|++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d~ 199 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG-ATVTVLDI 199 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 48999999999999999998875 67766543
No 431
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=57.01 E-value=12 Score=36.08 Aligned_cols=38 Identities=11% Similarity=-0.024 Sum_probs=27.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
++|+|+|+|.+|+.+++.|.+...++-|.|-+. +.+..
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr--~~~~~ 173 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR--TKENA 173 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS--SHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC--CHHHH
Confidence 489999999999999998876423644556553 45444
No 432
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=56.74 E-value=9.2 Score=39.34 Aligned_cols=39 Identities=18% Similarity=0.289 Sum_probs=29.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHh
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayl 132 (425)
.+|+|+|.|+||--+.-++.+. .++|+++ | .+.+.+..|
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~-G~~V~g~-D--id~~kV~~l 60 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL-GHRVVGY-D--VNPSIVERL 60 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEE-C--SCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCcEEEE-E--CCHHHHHHH
Confidence 4999999999998877777666 4788887 4 366655433
No 433
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=56.52 E-value=6.6 Score=36.08 Aligned_cols=31 Identities=19% Similarity=0.463 Sum_probs=26.2
Q ss_pred eEEEEc-cChHHHHHHHHHHcC-CCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFR-DDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~-~~~evvaInd 121 (425)
+|.|.| +|.||+.+++.|.++ +..+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence 789999 899999999999886 3478887754
No 434
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=56.44 E-value=12 Score=35.65 Aligned_cols=31 Identities=10% Similarity=0.135 Sum_probs=25.3
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
-+|.|.| .|.||+.+++++.... .+|+++..
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~ 173 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALG-AKLIGTVG 173 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 3799999 8999999999988775 57776643
No 435
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=56.35 E-value=9.1 Score=39.90 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=25.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|+|+|+|.||+.+++.+...+ ++|++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998775 6776554
No 436
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=56.24 E-value=13 Score=36.43 Aligned_cols=31 Identities=26% Similarity=0.484 Sum_probs=27.1
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
..+|+|+|-|.+|+.+++++.+.+ ++++++.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG-~~viv~d 42 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMG-YKVVVLD 42 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 358999999999999999998884 8888774
No 437
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=56.24 E-value=7.5 Score=37.42 Aligned_cols=31 Identities=19% Similarity=0.346 Sum_probs=24.6
Q ss_pred eeEEEEcc-ChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGf-GrIGr~vlr~l~~~~~~evvaInd 121 (425)
-+|.|.|. |.||...++++.... .+++++..
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 177 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN-FRLIAVTR 177 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeC
Confidence 38999995 599999999887764 68877754
No 438
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=56.18 E-value=5 Score=38.95 Aligned_cols=25 Identities=20% Similarity=0.283 Sum_probs=21.1
Q ss_pred CceeEEEEccChHHHHHHHHHHcCC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRD 112 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~ 112 (425)
...||.|+|.|-+|..++..|...+
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aG 59 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCG 59 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHT
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcC
Confidence 3459999999999999999887653
No 439
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=55.43 E-value=11 Score=35.36 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=26.6
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG-YEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 8999999999999874 78887754
No 440
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=55.30 E-value=9.4 Score=36.26 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=26.9
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCC----ceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDD----VDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~----~evvaInd 121 (425)
+||-|.| +|.||+.+++.|.+++. .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 4899999 99999999999988752 78887755
No 441
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=55.21 E-value=9.2 Score=36.59 Aligned_cols=30 Identities=30% Similarity=0.402 Sum_probs=23.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCC-ceEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDD-VDVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~-~evvaI 119 (425)
+||+|+|.|.+|..++..|..++- -+|+.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~ 32 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFI 32 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 499999999999999998877641 355544
No 442
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=54.84 E-value=11 Score=36.55 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=26.5
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 12 ~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~r 43 (404)
T 1i24_A 12 SRVMVIGGDGYCGWATALHLSKKN-YEVCIVDN 43 (404)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEEe
Confidence 4999999 9999999999999874 68887743
No 443
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=54.84 E-value=10 Score=36.60 Aligned_cols=31 Identities=29% Similarity=0.365 Sum_probs=25.7
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
-+|.|.| .|.||...++++.... .+++++..
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~ 192 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVN 192 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 3799999 5999999999988775 68877754
No 444
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=54.11 E-value=14 Score=35.30 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=25.2
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|.| .|.||+.+++++...+ .+++++..
T Consensus 148 ~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~ 178 (333)
T 1wly_A 148 YVLIHAAAGGMGHIMVPWARHLG-ATVIGTVS 178 (333)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 799999 7999999999998875 68777654
No 445
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=53.78 E-value=19 Score=37.08 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=25.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.||||+|.|.+|..+...+... .++|+..+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D 84 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-GIETFLVV 84 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEE
Confidence 4899999999999999999887 47877554
No 446
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=53.77 E-value=18 Score=34.96 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=25.5
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
-+|.|.| .|.||+.+++++.... .+++++..
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~ 195 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAG 195 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHcC-CEEEEEeC
Confidence 3799999 8999999999998875 67776653
No 447
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=53.70 E-value=47 Score=33.86 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=55.5
Q ss_pred eeEEEEcc----ChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEe
Q 014424 90 TKVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (425)
Q Consensus 90 ikVaInGf----GrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~ 165 (425)
.+|+|+|. |++|+.+++.|.+.+...|..||-- +++ +.| ++++
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~------------~~~------------------i~G--~~~y- 55 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK------------EEE------------------VQG--VKAY- 55 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS------------CSE------------------ETT--EECB-
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCC------------CCe------------------ECC--Eecc-
Confidence 48999994 4899999999987754677767631 111 122 1232
Q ss_pred cCCCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 166 ~~dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
.+.++++ ..+|+++-++......+.+....+.|+|.+++
T Consensus 56 -~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 56 -KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp -SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred -CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 2344554 36899998887777777777888889987664
No 448
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=53.69 E-value=11 Score=36.97 Aligned_cols=31 Identities=23% Similarity=0.413 Sum_probs=27.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.||+|+|.|.+|+.+++++.+. .+++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEeC
Confidence 4899999999999999999987 489888853
No 449
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=53.51 E-value=6.7 Score=37.46 Aligned_cols=30 Identities=23% Similarity=0.405 Sum_probs=25.2
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|+| .|.||...++++.... .+++++..
T Consensus 155 ~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~~ 185 (321)
T 3tqh_A 155 VVLIHAGAGGVGHLAIQLAKQKG-TTVITTAS 185 (321)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHHHcC-CEEEEEec
Confidence 799998 9999999999988775 68877753
No 450
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=53.39 E-value=13 Score=32.21 Aligned_cols=29 Identities=21% Similarity=0.368 Sum_probs=24.5
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||-|.| .|.||+.+++.|. + ..+|+.+..
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~r 34 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-K-KAEVITAGR 34 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-T-TSEEEEEES
T ss_pred EEEEEcCCcHHHHHHHHHHH-C-CCeEEEEec
Confidence 899999 9999999999998 6 478776643
No 451
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=53.27 E-value=13 Score=35.11 Aligned_cols=33 Identities=15% Similarity=0.229 Sum_probs=26.5
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCC------ceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDD------VDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~------~evvaInd 121 (425)
.++|-|.| +|.||+.+++.|.+++. .+|+++..
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r 53 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV 53 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc
Confidence 45899999 99999999999988752 57766644
No 452
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=53.21 E-value=12 Score=35.24 Aligned_cols=29 Identities=24% Similarity=0.291 Sum_probs=25.2
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEc
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaIn 120 (425)
||-|.| +|.||+.+++.|.+++ .+|+++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNG-HDVIILD 31 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 899999 9999999999999874 6777764
No 453
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=53.10 E-value=18 Score=34.82 Aligned_cols=30 Identities=10% Similarity=0.192 Sum_probs=23.4
Q ss_pred eEEEE-ccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGIN-GFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaIn-GfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|-|. |.|.||...++++.... .+|+++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEG-FRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 56666 49999999999888775 68877754
No 454
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=53.01 E-value=12 Score=35.62 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=26.4
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 9999999999999875 68877754
No 455
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=52.41 E-value=17 Score=35.68 Aligned_cols=36 Identities=25% Similarity=0.223 Sum_probs=27.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
-||||+|.|.+|+.+...+...+ ++|+ +-|+ +++.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G-~~V~-l~D~--~~~~l 42 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGG-FRVK-LYDI--EPRQI 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEE-EECS--CHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCC-CeEE-EEEC--CHHHH
Confidence 38999999999999998888774 7865 5564 45543
No 456
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=52.37 E-value=11 Score=37.06 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=24.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaI 119 (425)
+||+|+|.|.||..++..|..++-+ +|+.+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~ 36 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVI 36 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEE
Confidence 4999999999999999988877533 55544
No 457
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=52.23 E-value=9.9 Score=38.07 Aligned_cols=31 Identities=29% Similarity=0.399 Sum_probs=25.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
.+|+|+|+|.||+.+++.|...+ + +|+.+|.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G-~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG-VRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CCEEEEEeC
Confidence 38999999999999999998764 6 6766654
No 458
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=51.86 E-value=12 Score=36.44 Aligned_cols=32 Identities=34% Similarity=0.428 Sum_probs=24.8
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
+||+|+|.|.+|..+...|...+.++ |.+-|.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~ 41 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELAD-VVLYDV 41 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 49999999999999999888765347 445553
No 459
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=51.48 E-value=13 Score=37.47 Aligned_cols=30 Identities=27% Similarity=0.190 Sum_probs=24.9
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|+|+|+|.||+.+++.+...+ .+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D 202 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG-AIVRAFD 202 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 48999999999999999998775 6765544
No 460
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=51.43 E-value=13 Score=35.25 Aligned_cols=31 Identities=16% Similarity=0.035 Sum_probs=26.6
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CeEEEEeC
Confidence 5899999 9999999999999875 68877754
No 461
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=51.06 E-value=11 Score=35.44 Aligned_cols=31 Identities=19% Similarity=0.178 Sum_probs=25.1
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.||+|+|.|.+|+.+++.|.+.+ ++|...+.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEEEEEEC
Confidence 38999999999999999998775 56654443
No 462
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=51.02 E-value=13 Score=36.23 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=25.2
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|.| .|.||..+++++.... .+|+++..
T Consensus 166 ~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~ 196 (362)
T 2c0c_A 166 KVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCS 196 (362)
T ss_dssp EEEETTTTBTTHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC-CEEEEEEC
Confidence 899999 8999999999988775 57776654
No 463
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=50.99 E-value=14 Score=34.67 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=25.7
Q ss_pred eEEEEc-cChHHHHHHHHHHcC-C-C---ceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFR-D-D---VDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~-~-~---~evvaInd 121 (425)
||.|.| +|.||+.+++.|.++ . . .+|+++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 899999 999999999999874 2 4 68887754
No 464
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=50.87 E-value=20 Score=34.54 Aligned_cols=29 Identities=31% Similarity=0.458 Sum_probs=25.0
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEE
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAV 119 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaI 119 (425)
-+|.|+| .|.||...++++.... .+|+++
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~G-a~Vi~~ 181 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALARG-ARVFAT 181 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 3799999 8999999999988774 688877
No 465
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=50.78 E-value=18 Score=34.47 Aligned_cols=31 Identities=29% Similarity=0.252 Sum_probs=25.2
Q ss_pred eEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|.|.|-+|...+.++......+|+++..
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~ 196 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI 196 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSCCEEEEEES
T ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEEEC
Confidence 7999999999998888887654578887754
No 466
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=50.70 E-value=15 Score=35.74 Aligned_cols=29 Identities=34% Similarity=0.416 Sum_probs=23.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaI 119 (425)
.||+|+|.|.+|..++..+..++ + +|+-+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g-~~~v~l~ 38 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE-LADVVLV 38 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCeEEEE
Confidence 58999999999999998888774 5 65543
No 467
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=50.57 E-value=13 Score=35.07 Aligned_cols=32 Identities=9% Similarity=0.071 Sum_probs=26.5
Q ss_pred CceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|+|||+|+|-| .|+.+++++.+.+ ++++.+..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~G-~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDEG-FETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHTT-CCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhCC-CEEEEEEC
Confidence 56799999988 9999999998874 78777653
No 468
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=50.55 E-value=11 Score=36.38 Aligned_cols=29 Identities=28% Similarity=0.562 Sum_probs=23.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc--eEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV--DVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~--evvaI 119 (425)
+||+|+|.|.+|..++..|...+ . +|+.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g-~~~~V~l~ 31 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG-FAREMVLI 31 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCCeEEEE
Confidence 38999999999999998887664 4 66544
No 469
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=50.54 E-value=16 Score=34.92 Aligned_cols=43 Identities=12% Similarity=0.048 Sum_probs=28.2
Q ss_pred CccccCCCCCCceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 78 PPTIQKSRSDGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 78 ~~~~~~~~~~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
|..++.++..++.+|.|+|-|.+|-..+..|.++. .+|+-|..
T Consensus 6 ~~~~~~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G-~~V~llE~ 48 (382)
T 1ryi_A 6 HHMARIRAMKRHYEAVVIGGGIIGSAIAYYLAKEN-KNTALFES 48 (382)
T ss_dssp --------CCSEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred hhHHHhhccCCCCCEEEECcCHHHHHHHHHHHhCC-CcEEEEeC
Confidence 34444445556789999999999999998888774 67665643
No 470
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=50.18 E-value=28 Score=34.05 Aligned_cols=29 Identities=21% Similarity=0.235 Sum_probs=23.7
Q ss_pred eEEEEccChHHHHHHHHHHcCCCc-eEEEEc
Q 014424 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~~~~-evvaIn 120 (425)
+|.|+|.|.||...++++.... . .|+++.
T Consensus 188 ~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~ 217 (398)
T 1kol_A 188 TVYVAGAGPVGLAAAASARLLG-AAVVIVGD 217 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHHCC-CCeEEEEc
Confidence 7999999999999999888764 5 566653
No 471
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=50.16 E-value=15 Score=35.68 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=24.6
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCc------eEEEE
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDV------DVVAV 119 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~------evvaI 119 (425)
++||+|.| .|.||..++..|..++.+ +|+.+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~ 42 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLL 42 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEE
Confidence 35999999 599999999988876533 67655
No 472
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=49.84 E-value=12 Score=36.35 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=22.9
Q ss_pred eeEEEEc-cChHHHHHHHHHHcC-CC-ceEEEE
Q 014424 90 TKVGING-FGRIGRLVLRVAAFR-DD-VDVVAV 119 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~-~~-~evvaI 119 (425)
|||+|+| .|.||..++..|..+ +. -+|+-+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~ 33 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLY 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEE
Confidence 4999999 999999999888765 42 245544
No 473
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=49.45 E-value=14 Score=36.58 Aligned_cols=30 Identities=23% Similarity=0.240 Sum_probs=24.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|+|+|+|.||+.+++.+...+ .+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~d 202 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG-AVVMATD 202 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998775 6755443
No 474
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=49.28 E-value=20 Score=36.53 Aligned_cols=30 Identities=37% Similarity=0.520 Sum_probs=25.2
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.||+|+|.|.+|..+...+.... ++|+.++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G-~~V~l~D 67 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVG-ISVVAVE 67 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 48999999999999999988774 7876553
No 475
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=48.55 E-value=14 Score=34.35 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=26.7
Q ss_pred CCCceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 86 SDGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 86 ~~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
..|+.+|.|+|.|..|-..+..|.+++ ++++-|..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~vie~ 53 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAE-IKPILYEG 53 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTT-CCCEEECC
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEec
Confidence 346679999999999999998888774 66665543
No 476
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=48.44 E-value=15 Score=38.83 Aligned_cols=33 Identities=27% Similarity=0.252 Sum_probs=27.8
Q ss_pred ceeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+++|-|.| +|.||+.+++.|.+++..+|+++..
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r 348 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 348 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEES
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEc
Confidence 46899999 9999999999998874478887754
No 477
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=47.98 E-value=15 Score=33.26 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=24.4
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
||-|.| +|.||+.+++.|.+ . .+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g-~~V~~~~r 31 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-R-HEVIKVYN 31 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-T-SCEEEEES
T ss_pred EEEEECCCChhHHHHHHHHhc-C-CeEEEecC
Confidence 899999 99999999999984 3 67777654
No 478
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=47.96 E-value=16 Score=36.05 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=25.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.+|+|.|.|.||+.+++.+...+ .+|++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d 196 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG-AQVTILD 196 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 48999999999999999998875 5776654
No 479
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=47.76 E-value=22 Score=34.45 Aligned_cols=86 Identities=20% Similarity=0.131 Sum_probs=55.6
Q ss_pred eeEEEE-c-cChHHHHHHHHHHcCCCceEEEEcCCCCChHHHhHhhhcccccCCccceEEEeCCCeEEECCEEEEEEecC
Q 014424 90 TKVGIN-G-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (425)
Q Consensus 90 ikVaIn-G-fGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ayll~yDS~~g~f~~~v~~~~~~~l~i~Gk~I~v~~~~ 167 (425)
.+++|+ | +|..|+.+++.+.+++ +++++..+|. + .+. + +.| ++++.
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G-~~~v~~VnP~-----------------~-~g~-~--------i~G--~~vy~-- 61 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYG-TNLVGGTTPG-----------------K-GGK-T--------HLG--LPVFN-- 61 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTT-----------------C-TTC-E--------ETT--EEEES--
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCC-CcEEEEeCCC-----------------c-Ccc-e--------ECC--eeeec--
Confidence 368888 9 5999999999888774 7766333331 0 000 0 223 23332
Q ss_pred CCCCCCCcccCcCEEEEccCcccCHHHHHHHHhCCCCEEEE
Q 014424 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (425)
Q Consensus 168 dp~~i~W~~~gvDiV~esTG~f~s~e~a~~hl~aGakkVVI 208 (425)
+.++++ .+.++|+++-++......+.+...++.|.|.+++
T Consensus 62 sl~el~-~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 62 TVKEAK-EQTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp SHHHHH-HHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hHHHhh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 122332 1126899999998887788888889999998665
No 480
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=47.66 E-value=11 Score=38.20 Aligned_cols=31 Identities=10% Similarity=0.105 Sum_probs=26.1
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.++ ..+|+++..
T Consensus 151 ~~VLVTGatG~iG~~l~~~L~~~-g~~V~~l~R 182 (508)
T 4f6l_B 151 GNTLLTGATGFLGAYLIEALQGY-SHRIYCFIR 182 (508)
T ss_dssp EEEEESCTTSHHHHHHHHHTBTT-EEEEEEEEE
T ss_pred CeEEEECCccchHHHHHHHHHhc-CCEEEEEEC
Confidence 5899999 999999999999655 478877765
No 481
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=47.54 E-value=13 Score=37.55 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=24.6
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEc
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaIn 120 (425)
.||+|+|+|+||+.+++.+...+ .+|.+.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D 214 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG-AKTTGYD 214 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEEe
Confidence 49999999999999999998774 6765443
No 482
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=47.45 E-value=13 Score=36.35 Aligned_cols=35 Identities=20% Similarity=0.063 Sum_probs=27.7
Q ss_pred CCC-ceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 86 SDG-NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 86 ~~m-~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.|| +.||.|.|-|.++..++|++.+.+ ++++++..
T Consensus 3 ~m~~~~~ilI~g~g~~~~~~~~a~~~~G-~~~v~v~~ 38 (403)
T 4dim_A 3 AMYDNKRLLILGAGRGQLGLYKAAKELG-IHTIAGTM 38 (403)
T ss_dssp ---CCCEEEEECCCGGGHHHHHHHHHHT-CEEEEEEC
T ss_pred cccCCCEEEEECCcHhHHHHHHHHHHCC-CEEEEEcC
Confidence 344 469999999999999999998874 89888854
No 483
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=47.30 E-value=16 Score=37.34 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=26.8
Q ss_pred ceeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+||||+|.|++|..+...|.+.. ++|+.++-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G-~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG-HEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 369999999999999999988874 78777653
No 484
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=47.22 E-value=14 Score=35.93 Aligned_cols=38 Identities=21% Similarity=0.158 Sum_probs=28.9
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
.+|+|+|+|.+|+..++.|.+...++.+.|-+. +++..
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r--~~~~a 163 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV--REKAA 163 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS--SHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC--CHHHH
Confidence 489999999999999999887334666777764 45543
No 485
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=47.11 E-value=14 Score=35.59 Aligned_cols=31 Identities=29% Similarity=0.475 Sum_probs=24.0
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaInd 121 (425)
|||+|+|.|.+|..++..|..++.+ +|+ +-|
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~-L~D 32 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIA-LVD 32 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEE-EEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEE
Confidence 3999999999999999888776533 555 444
No 486
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=46.80 E-value=23 Score=32.33 Aligned_cols=31 Identities=29% Similarity=0.314 Sum_probs=24.3
Q ss_pred eeEEEEc-cCh-HHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGR-IGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGr-IGr~vlr~l~~~~~~evvaInd 121 (425)
.++-|.| +|+ ||+.+++.|.+++ ..|+.+..
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G-~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEG-ADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCCchHHHHHHHHHHCC-CEEEEecC
Confidence 4688999 585 9999999999885 67765543
No 487
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=46.64 E-value=17 Score=34.97 Aligned_cols=30 Identities=30% Similarity=0.368 Sum_probs=25.9
Q ss_pred eEEEEc-cChHHHHHHHHHH-cCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAA-FRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~-~~~~~evvaInd 121 (425)
+|-|.| +|.||+.+++.|. +++ .+|+++..
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~~r 35 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDS 35 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCC-CEEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHhCC-CEEEEEec
Confidence 899999 9999999999998 774 68877754
No 488
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=46.48 E-value=25 Score=34.08 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=28.1
Q ss_pred eEEEEccChHHHHHHHHHHcC-CCceEEEEcCCCCChHHHhHh
Q 014424 91 KVGINGFGRIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAYM 132 (425)
Q Consensus 91 kVaInGfGrIGr~vlr~l~~~-~~~evvaInd~~~~~~~~ayl 132 (425)
+|.|+|.|.||...++++... . .+|+++.. +.+.+.++
T Consensus 189 ~VlV~GaG~vG~~avqlak~~~G-a~Vi~~~~---~~~~~~~~ 227 (359)
T 1h2b_A 189 YVAIVGVGGLGHIAVQLLKVMTP-ATVIALDV---KEEKLKLA 227 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCC-CEEEEEES---SHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCC-CeEEEEeC---CHHHHHHH
Confidence 899999999999999988766 4 57777653 34444343
No 489
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=46.48 E-value=17 Score=35.22 Aligned_cols=30 Identities=30% Similarity=0.439 Sum_probs=23.4
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCc-eEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~-evvaI 119 (425)
+||+|+|.|.||..++-.|..++-+ +|+-+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~ 38 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLI 38 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 5999999999999988888777522 55544
No 490
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=46.45 E-value=15 Score=38.04 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=26.7
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd 121 (425)
.+|.|.|+|++|+.+++.|.+. +.+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 4899999999999999999887 478877754
No 491
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=46.40 E-value=18 Score=33.56 Aligned_cols=29 Identities=17% Similarity=0.279 Sum_probs=25.0
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEc
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaIn 120 (425)
+|-|-| +|.||+.+++.|.+++ .+|+++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 32 (322)
T 2p4h_X 3 RVCVTGGTGFLGSWIIKSLLENG-YSVNTTI 32 (322)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHHCC-CEEEEEE
Confidence 789999 9999999999999875 6877654
No 492
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=46.16 E-value=20 Score=35.32 Aligned_cols=31 Identities=10% Similarity=0.105 Sum_probs=25.9
Q ss_pred eeEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 90 ikVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
++|-|.| +|.||+.+++.|.++ ..+|+++..
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~R 101 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGY-SHRIYCFIR 101 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTT-EEEEEEEEE
T ss_pred CEEEEecCCcHHHHHHHHHHHcC-CCEEEEEEC
Confidence 5899999 999999999999766 467777754
No 493
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=46.14 E-value=19 Score=32.04 Aligned_cols=30 Identities=20% Similarity=0.316 Sum_probs=25.3
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG-HTVIGIDR 33 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 789999 8999999999999874 67776644
No 494
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=45.91 E-value=27 Score=36.03 Aligned_cols=39 Identities=26% Similarity=0.266 Sum_probs=30.8
Q ss_pred CCceeEEEEccChHHHHHHHHHHcCCCceEEEEcCCCCChHHH
Q 014424 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (425)
Q Consensus 87 ~m~ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~~~~~~~~ 129 (425)
.++.+|-|.|+|++|+.+++.|.+. +.+++.|.. +++.+
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~-~~~vvvid~---~~~~~ 163 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESR-NHLFVVVTD---NYDQA 163 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTT-TCCEEEEES---CHHHH
T ss_pred ccCCeEEEECCChHHHHHHHHHHHC-CCCEEEEEC---CHHHH
Confidence 3456899999999999999999876 478887765 45544
No 495
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=45.87 E-value=16 Score=36.12 Aligned_cols=24 Identities=42% Similarity=0.423 Sum_probs=20.9
Q ss_pred ceeEEEEccChHHHHHHHHHHcCC
Q 014424 89 NTKVGINGFGRIGRLVLRVAAFRD 112 (425)
Q Consensus 89 ~ikVaInGfGrIGr~vlr~l~~~~ 112 (425)
.-||.|+|.|.+|..++..|...+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aG 141 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSG 141 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC
Confidence 458999999999999999988654
No 496
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=45.50 E-value=20 Score=34.44 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=23.5
Q ss_pred eeEEEEccChHHHHHHHHHHcCC-CceEEEE
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRD-DVDVVAV 119 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~-~~evvaI 119 (425)
|||+|+|.|.+|..+...|..++ ..+|+.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~ 31 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLL 31 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 39999999999999998887652 3566555
No 497
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=44.65 E-value=23 Score=35.03 Aligned_cols=33 Identities=24% Similarity=0.224 Sum_probs=24.1
Q ss_pred CCceeEEEEcc-ChHHHHHHHHHHcCCCc-eEEEE
Q 014424 87 DGNTKVGINGF-GRIGRLVLRVAAFRDDV-DVVAV 119 (425)
Q Consensus 87 ~m~ikVaInGf-GrIGr~vlr~l~~~~~~-evvaI 119 (425)
+.++||+|+|. |.||..++..+..++.. +|+-+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLi 40 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLY 40 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEE
Confidence 43569999996 99999998877766422 55544
No 498
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=44.38 E-value=20 Score=33.18 Aligned_cols=33 Identities=21% Similarity=0.129 Sum_probs=27.0
Q ss_pred CceeEEEEccCh---------HHHHHHHHHHcCCCceEEEEcC
Q 014424 88 GNTKVGINGFGR---------IGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 88 m~ikVaInGfGr---------IGr~vlr~l~~~~~~evvaInd 121 (425)
|++||+|+|-|. -|+.+++++.+.+ ++++.++.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G-~~v~~~~~ 42 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG-IDAYPVDP 42 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT-CEEEEECT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC-CeEEEEec
Confidence 567999999887 7899999998874 88877753
No 499
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=44.34 E-value=19 Score=36.59 Aligned_cols=31 Identities=23% Similarity=0.168 Sum_probs=25.3
Q ss_pred eeEEEEccChHHHHHHHHHHcCCCceEEEEcCC
Q 014424 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (425)
Q Consensus 90 ikVaInGfGrIGr~vlr~l~~~~~~evvaInd~ 122 (425)
.||+|+|+|+||+.+++.+...+ .+|. +-|.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~-v~D~ 221 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG-AVVS-ATDV 221 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 49999999999999999998775 5655 4453
No 500
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=43.69 E-value=16 Score=35.31 Aligned_cols=30 Identities=13% Similarity=0.236 Sum_probs=24.4
Q ss_pred eEEEEc-cChHHHHHHHHHHcCCCceEEEEcC
Q 014424 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (425)
Q Consensus 91 kVaInG-fGrIGr~vlr~l~~~~~~evvaInd 121 (425)
+|.|+| .|.||...++++.... ..++++..
T Consensus 170 ~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~ 200 (364)
T 1gu7_A 170 WFIQNGGTSAVGKYASQIGKLLN-FNSISVIR 200 (364)
T ss_dssp EEEESCTTSHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred EEEECCCCcHHHHHHHHHHHHCC-CEEEEEec
Confidence 899999 5999999999887664 67777754
Done!