Query 014427
Match_columns 425
No_of_seqs 117 out of 179
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 11:23:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014427.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014427hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xpp_A IWS1, ECU08_0440; trans 100.0 1.5E-52 5.1E-57 373.5 14.6 144 252-401 1-144 (145)
2 3nfq_A Transcription factor IW 100.0 1.3E-51 4.5E-56 375.8 15.3 158 247-410 3-168 (170)
3 1wjt_A Transcription elongatio 97.8 9.7E-06 3.3E-10 68.5 3.8 55 337-398 35-89 (103)
4 1pqv_S STP-alpha, transcriptio 97.4 0.00011 3.9E-09 71.8 5.4 55 337-399 25-80 (309)
5 1juq_A ADP-ribosylation factor 62.4 57 0.0019 29.0 10.2 60 285-345 67-126 (171)
6 2kkm_A Translation machinery-a 61.7 20 0.00069 31.5 6.9 78 250-332 43-124 (144)
7 4hxt_A De novo protein OR329; 49.9 1.1E+02 0.0039 25.6 9.6 80 303-392 35-114 (252)
8 4hxt_A De novo protein OR329; 49.6 1.2E+02 0.004 25.6 10.0 85 302-396 160-244 (252)
9 3tpo_A Importin subunit alpha- 48.1 39 0.0013 33.6 7.3 79 304-392 412-496 (529)
10 4b8j_A Importin subunit alpha- 44.3 1.4E+02 0.0047 29.0 10.4 82 303-392 405-495 (528)
11 3ul1_B Importin subunit alpha- 43.0 91 0.0031 30.9 9.0 79 304-392 393-477 (510)
12 4db6_A Armadillo repeat protei 40.0 97 0.0033 25.8 7.5 80 303-392 129-208 (210)
13 1jdh_A Beta-catenin; beta-cate 35.0 1.9E+02 0.0064 27.5 9.5 81 300-391 448-528 (529)
14 3eg5_B Protein diaphanous homo 32.5 36 0.0012 33.8 4.2 54 291-345 87-147 (383)
15 1mhq_A ADP-ribosylation factor 32.3 2.5E+02 0.0084 24.3 10.3 59 286-345 56-114 (148)
16 4db8_A Armadillo-repeat protei 32.0 2.4E+02 0.0081 24.0 10.1 81 301-392 85-166 (252)
17 3qml_C Protein SLS1, nucleotid 29.9 2.6E+02 0.009 27.8 9.7 72 312-393 118-189 (315)
18 3g2s_A C-terminal fragment of 25.6 1.3E+02 0.0045 26.2 6.1 60 285-345 65-124 (149)
19 4db8_A Armadillo-repeat protei 24.4 3.3E+02 0.011 23.1 10.1 77 305-391 47-123 (252)
20 3clj_A Protein NRD1; CTD-inter 21.4 2.6E+02 0.0088 25.0 7.2 64 235-299 4-69 (157)
No 1
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A
Probab=100.00 E-value=1.5e-52 Score=373.54 Aligned_cols=144 Identities=34% Similarity=0.637 Sum_probs=135.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHhhhHHHHHHHhhHhHHHHHHhhhhHHHHHHhhccCCCCCCCC
Q 014427 252 KSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLSLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPN 331 (425)
Q Consensus 252 ~s~~Ei~~~v~~Li~~M~~AAeeD~ean~~gkPAl~KLkmLpeV~~~L~K~~Lq~~fLD~GiL~vLk~WLePLPDgSLPn 331 (425)
++++||..+|.+|+.+|..||++|.++|++++|||+||+||++|+.+|+|.+||.+||++|+|++|+.||+|||||||||
T Consensus 1 ~~~~e~~~~~~~l~~~M~~Aa~~D~~a~~~~~PA~~KlklL~~V~~~l~k~~l~~~~ld~giL~~l~~WL~PLpDgsLP~ 80 (145)
T 2xpp_A 1 MDPGTVLEISRSLKKRMQDILKKDNANNLEGRPATGKIENVEEISDILMSKALQESLLDEGILDEIKGWLEPLPDKSMPN 80 (145)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHTCTTTHHHHHHTTHHHHHHHHHSCCTTSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHhhHHHHHHHHhhHHHHHHHHHcCHHHHHHHHhCcCCCCCCCC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHHHHHHHHHHHHHhhhhhhccCcc
Q 014427 332 INIRAAILKILTEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKWSRPIFNKSTR 401 (425)
Q Consensus 332 l~IRt~LLkiL~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~eNKrlA~~LI~kWSRPI~~~ss~ 401 (425)
++||+.||++|.+|||++ +||++||||||||||++||+||++||++|.+||++||||||++|++
T Consensus 81 ~~Ir~~lL~~L~~lPI~~------e~Lk~SglGkvv~~l~k~~~et~~nk~la~~Li~~WsRpi~~~s~~ 144 (145)
T 2xpp_A 81 IKIRKRLLDVLKTMKIHK------EHLVTSGVGKIVYFYSINPKESKEVRASAKALVQKWTNEVFKPEGG 144 (145)
T ss_dssp HHHHHHHHHHHHTSCCCH------HHHHHHCHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHCCCCH------HHhhcCCCCcchhhhhcCCccCHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999974 7999999999999999999999999999999999999999999874
No 2
>3nfq_A Transcription factor IWS1; SPN1, RNA polymerase II; 1.85A {Saccharomyces cerevisiae} PDB: 3o8z_A 3oak_A
Probab=100.00 E-value=1.3e-51 Score=375.84 Aligned_cols=158 Identities=32% Similarity=0.616 Sum_probs=131.4
Q ss_pred ccccCCCH-HHHHHHHHHHHHHHHHHHHHHHHH-Hh------cCChHHHHHhhhHHHHHHHhhHhHHHHHHhhhhHHHHH
Q 014427 247 RKKNEKSP-AEIALLVENVMAELEVTAEEDAEL-NR------QGKPAINKLKKLSLLTEVLSKKQLQQEFLDHGVLTLLK 318 (425)
Q Consensus 247 Kkk~~~s~-~Ei~~~v~~Li~~M~~AAeeD~ea-n~------~gkPAl~KLkmLpeV~~~L~K~~Lq~~fLD~GiL~vLk 318 (425)
||+.+.+. ...++.|.+|+.+|..||++|.++ |+ +++|||+||+|||+|+.+|+|.+||.+||++|||++|+
T Consensus 3 ~~~~~~dl~~~~Dd~i~~L~~~M~~Aa~~D~~~~n~~~~~~~~~~PAl~KLkmL~~V~~~L~k~~L~~~~ld~giL~~l~ 82 (170)
T 3nfq_A 3 TRRDEDDLEQYLDEKILRLKDEMNIAAQLDIDTLNKRIETGDTSLIAMQKVKLLPKVVSVLSKANLADTILDNNLLQSVR 82 (170)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHTCGGGHHHHHHTTHHHHHH
T ss_pred ccchhhhHHHhhhHHHHHHHHHHHHHHHHhHHHHHhhhccccccccHHHHHhhHHHHHHHHhHHHHHHHHHHcchHHHHH
Confidence 44445555 456679999999999999999875 43 57999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHhcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHHHHHHHHHHHHHhhhhhhcc
Q 014427 319 NWLEPLPDGSLPNINIRAAILKILTEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKWSRPIFNK 398 (425)
Q Consensus 319 ~WLePLPDgSLPnl~IRt~LLkiL~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~eNKrlA~~LI~kWSRPI~~~ 398 (425)
.||+||||||||||+||+.||++|.+|||++ +||++||||||||||++||+||++||++|.+||++||||||++
T Consensus 83 ~WLePLpDgSLP~~~Ir~~lL~~L~~lPI~~------e~Lk~SglGkvV~~l~k~~~et~~nkrla~~Li~~WsRpI~~~ 156 (170)
T 3nfq_A 83 IWLEPLPDGSLPSFEIQKSLFAALNDLPVKT------EHLKESGLGRVVIFYTKSKRVEAQLARLAEKLIAEWTRPIIGA 156 (170)
T ss_dssp HHHSCCTTSCCCCHHHHHHHHHHHHTSCCCH------HHHHHHSHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTCCCC--
T ss_pred HHhCcCCCCCCCcHHHHHHHHHHHHHCCCCH------HHHhhCCCCceeeehhcCCcccHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999964 7999999999999999999999999999999999999999999
Q ss_pred Cccchhhhcccc
Q 014427 399 STRFEDMKTVED 410 (425)
Q Consensus 399 ss~Y~d~~~~e~ 410 (425)
|++|++++....
T Consensus 157 s~~y~~~~~~~~ 168 (170)
T 3nfq_A 157 SDNYRDKRIMQL 168 (170)
T ss_dssp ------------
T ss_pred Ccchhhhhhhhc
Confidence 999999876543
No 3
>1wjt_A Transcription elongation factor S-II protein 3; four-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.48.3.1
Probab=97.84 E-value=9.7e-06 Score=68.54 Aligned_cols=55 Identities=22% Similarity=0.305 Sum_probs=47.3
Q ss_pred HHHHHHhcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHHHHHHHHHHHHHhhhhhhcc
Q 014427 337 AILKILTEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKWSRPIFNK 398 (425)
Q Consensus 337 ~LLkiL~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~eNKrlA~~LI~kWSRPI~~~ 398 (425)
.+|+.|..|||. .+.|++++||++|..|+|| ...++++.+|+.||.+|...|-..
T Consensus 35 ~~L~~L~~~~iT------~e~L~~T~IGk~Vn~LrKh-~~~~~V~~lAk~Lv~~WK~~v~~~ 89 (103)
T 1wjt_A 35 DLLKKLNSCQMS------IQLLQTTRIGVAVNGVRKH-CSDKEVVSLAKVLIKNWKRLLDSP 89 (103)
T ss_dssp HHHHHHHTSCCC------HHHHHHTCHHHHHHHHHHH-CCCSHHHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHhCCCCC------HHHHHHcchhHHHHHHHcc-CCcHHHHHHHHHHHHHHHHHHHHh
Confidence 578888999985 4799999999999999998 244688999999999999988653
No 4
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=97.43 E-value=0.00011 Score=71.81 Aligned_cols=55 Identities=25% Similarity=0.439 Sum_probs=45.5
Q ss_pred HHHHHH-hcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHHHHHHHHHHHHHhhhhhhccC
Q 014427 337 AILKIL-TEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKWSRPIFNKS 399 (425)
Q Consensus 337 ~LLkiL-~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~eNKrlA~~LI~kWSRPI~~~s 399 (425)
.+|+.| ..+||. .++|+.++||++|..|.+| ..++++.+|+.||.+|.+.|....
T Consensus 25 ~~L~~L~~~~~it------~~~L~~T~IG~~Vn~lrkh--~~~~v~~~Ak~Li~~WK~~v~~~~ 80 (309)
T 1pqv_S 25 EILHVLDKEFVPT------EKLLRETKVGVEVNKFKKS--TNVEISKLVKKMISSWKDAINKNK 80 (309)
T ss_pred HHHHHHHhcCCCC------HHHHHhCChhHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHhc
Confidence 445555 555985 4799999999999999999 455899999999999999987653
No 5
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=62.40 E-value=57 Score=29.01 Aligned_cols=60 Identities=15% Similarity=0.222 Sum_probs=47.1
Q ss_pred HHHHHhhhHHHHHHHhhHhHHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcC
Q 014427 285 AINKLKKLSLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEF 345 (425)
Q Consensus 285 Al~KLkmLpeV~~~L~K~~Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~L 345 (425)
++.-|.+|+.++.-|- ..+|..+-...+|+.|...+.|-++++-.+..||+.+|.+|...
T Consensus 67 ql~AL~LLd~~vkNCG-~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 126 (171)
T 1juq_A 67 ALQALTVLEACMKNCG-RRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSW 126 (171)
T ss_dssp HHHHHHHHHHHHHHSH-HHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-HHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHH
Confidence 4555555555555432 46888888999999999999988888888899999999999876
No 6
>2kkm_A Translation machinery-associated protein 16; nucleus, structural genomics, PSI-2, protein structure initiative; NMR {Saccharomyces cerevisiae}
Probab=61.70 E-value=20 Score=31.51 Aligned_cols=78 Identities=15% Similarity=0.227 Sum_probs=53.9
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHhhhHHHHHHHhhHhH----HHHHHhhhhHHHHHHhhccCC
Q 014427 250 NEKSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLSLLTEVLSKKQL----QQEFLDHGVLTLLKNWLEPLP 325 (425)
Q Consensus 250 ~~~s~~Ei~~~v~~Li~~M~~AAeeD~ean~~gkPAl~KLkmLpeV~~~L~K~~L----q~~fLD~GiL~vLk~WLePLP 325 (425)
...+.+|+..+|...|.+-..=.++=....+.|+|+.++..+|...+....+..= ..-|.+..-+..|+.|
T Consensus 43 ~~~t~~e~~~lI~~yl~R~d~ELeql~~~rR~gRp~s~Re~~L~~~~~~E~~ey~tG~~iPDLtd~~nvk~Lr~W----- 117 (144)
T 2kkm_A 43 PIFDHAHTREFIQSFIERDDTELDELKKKRRSNRPPSNRQVLLQQRRDQELKEFKAGFLCPDLSDAKNMEFLRNW----- 117 (144)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCCTTHHHHHHHHHHHHHHHHHTTEEEECSCCHHHHHHHHTC-----
T ss_pred CCCCHHHHHHHHHHHHhcCcHHHHHHHHhhCCCCCCchHHHHHHHHHHHHHHHHccCccCCCCCCHHHHHHHHHc-----
Confidence 4588999999999988776554433334567899999999999887776543321 1114455668889999
Q ss_pred CCCCCCH
Q 014427 326 DGSLPNI 332 (425)
Q Consensus 326 DgSLPnl 332 (425)
||++-.+
T Consensus 118 ~G~~~~l 124 (144)
T 2kkm_A 118 NGTFGLL 124 (144)
T ss_dssp SSCSTHH
T ss_pred CCChhcC
Confidence 6775443
No 7
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=49.89 E-value=1.1e+02 Score=25.64 Aligned_cols=80 Identities=14% Similarity=0.191 Sum_probs=59.3
Q ss_pred hHHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHHHHH
Q 014427 303 QLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTSNRK 382 (425)
Q Consensus 303 ~Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~eNKr 382 (425)
.....|++.|++..|-..|.- ++..+|...+.+|.+|-.... ..+..+..+|+-..++-+-++ ..+..+.
T Consensus 35 ~~~~~~~~~g~i~~L~~ll~~------~~~~v~~~a~~~L~~l~~~~~--~~~~~~~~~~~i~~l~~ll~~--~~~~v~~ 104 (252)
T 4hxt_A 35 SAIKAIVDAGGVEVLVKLLTS------TDSEVQKEAARALANIASGPD--EAIKAIVDAGGVEVLVKLLTS--TDSEVQK 104 (252)
T ss_dssp HHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSCH--HHHHHHHHTTHHHHHHHHTTC--SSHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHhC------CCHHHHHHHHHHHHHHHcCCh--HHHHHHHHCCCHHHHHHHHcC--CCHHHHH
Confidence 367788999999999998864 468999999999999986522 246777777766666655554 3467777
Q ss_pred HHHHHHHHhh
Q 014427 383 LAKDLVDKWS 392 (425)
Q Consensus 383 lA~~LI~kWS 392 (425)
.|-.++..-+
T Consensus 105 ~a~~~L~~l~ 114 (252)
T 4hxt_A 105 EAARALANIA 114 (252)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 7777766655
No 8
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=49.57 E-value=1.2e+02 Score=25.56 Aligned_cols=85 Identities=13% Similarity=0.163 Sum_probs=63.2
Q ss_pred HhHHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHHHH
Q 014427 302 KQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTSNR 381 (425)
Q Consensus 302 ~~Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~eNK 381 (425)
......+++.|++..|...|.. ++..+|...+.+|.+|-.... ..+..|.++|+=..++.+-+++ .+..+
T Consensus 160 ~~~~~~~~~~~~i~~L~~ll~~------~~~~v~~~a~~~L~~l~~~~~--~~~~~l~~~~~i~~L~~ll~~~--~~~v~ 229 (252)
T 4hxt_A 160 DEAIKAIVDAGGVEVLVKLLTS------TDSEVQKEAARALANIASGPT--SAIKAIVDAGGVEVLQKLLTST--DSEVQ 229 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSBH--HHHHHHHHTTHHHHHHHGGGCS--CHHHH
T ss_pred HHHHHHHHHCcCHHHHHHHHCC------CCHHHHHHHHHHHHHHHcCCH--HHHHHHHHCCCHHHHHHHHCCC--cHHHH
Confidence 4445778899999999999872 557999999999999975322 2356788888877777777665 45888
Q ss_pred HHHHHHHHHhhhhhh
Q 014427 382 KLAKDLVDKWSRPIF 396 (425)
Q Consensus 382 rlA~~LI~kWSRPI~ 396 (425)
..|-.++..-...-.
T Consensus 230 ~~a~~~L~~l~~~~~ 244 (252)
T 4hxt_A 230 KEAQRALENIKSGGW 244 (252)
T ss_dssp HHHHHHHHHHHHTCB
T ss_pred HHHHHHHHHHHcCCC
Confidence 888888876554433
No 9
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=48.12 E-value=39 Score=33.58 Aligned_cols=79 Identities=19% Similarity=0.245 Sum_probs=58.6
Q ss_pred HHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCC-----C-CccccchHHHHhhcCcchhhHhhhcCchhc
Q 014427 304 LQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFP-----I-DLEQFDRREQLKKSGLGKVIMFLSKSDEET 377 (425)
Q Consensus 304 Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LP-----I-d~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET 377 (425)
....|++.|++..|..-|. -++-.|+..+|.+|.++= + ..+. -+..+.++|.=..|..|..|+ .
T Consensus 412 ~~~~l~~~g~i~~L~~LL~------~~d~~i~~~~L~aL~nil~~~~~~~~~~~--~~~~iee~ggl~~ie~Lq~~~--n 481 (529)
T 3tpo_A 412 QIVYLVHCGIIEPLMNLLS------AKDTKIIQVILDAISNIFQAAEKLGETEK--LSIMIEECGGLDKIEALQRHE--N 481 (529)
T ss_dssp HHHHHHHTTCHHHHHHGGG------CSCHHHHHHHHHHHHHHHHHHHTTTCHHH--HHHHHHHTTCHHHHTGGGGCS--S
T ss_pred HHHHHHHCcCHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHhHhccChHH--HHHHHHHCCcHHHHHHHHcCC--C
Confidence 3456889999999998885 356789999888887762 1 1111 134577888888888898886 4
Q ss_pred HHHHHHHHHHHHHhh
Q 014427 378 TSNRKLAKDLVDKWS 392 (425)
Q Consensus 378 ~eNKrlA~~LI~kWS 392 (425)
.++..+|..||+++.
T Consensus 482 ~~i~~~A~~iie~yf 496 (529)
T 3tpo_A 482 ESVYKASLNLIEKYF 496 (529)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHC
Confidence 578899999999973
No 10
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=44.28 E-value=1.4e+02 Score=29.03 Aligned_cols=82 Identities=16% Similarity=0.092 Sum_probs=57.0
Q ss_pred hHHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCCCCccc---------cchHHHHhhcCcchhhHhhhcC
Q 014427 303 QLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFPIDLEQ---------FDRREQLKKSGLGKVIMFLSKS 373 (425)
Q Consensus 303 ~Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LPId~e~---------~d~rE~Lk~SGLGKVVmfL~K~ 373 (425)
.....|++.|++..|..-|.- ++..|+...+.+|.+|=-..+. ..-...|.++|.-..+..|..|
T Consensus 405 ~~~~~l~~~~~i~~L~~lL~~------~d~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L~~~ 478 (528)
T 4b8j_A 405 DQIKYLVSEGCIKPLCDLLIC------PDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSH 478 (528)
T ss_dssp HHHHHHHHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGGGC
T ss_pred HHHHHHHHCCCHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHHHcC
Confidence 444556677887777776643 5679999999998887210000 0014678888877888888887
Q ss_pred chhcHHHHHHHHHHHHHhh
Q 014427 374 DEETTSNRKLAKDLVDKWS 392 (425)
Q Consensus 374 p~ET~eNKrlA~~LI~kWS 392 (425)
+ ..+++..|..|+++..
T Consensus 479 ~--~~~v~~~a~~il~~~~ 495 (528)
T 4b8j_A 479 D--NNEIYEKAVKILEAYW 495 (528)
T ss_dssp S--SHHHHHHHHHHHHHHC
T ss_pred C--CHHHHHHHHHHHHHHC
Confidence 6 4568999999998754
No 11
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=42.98 E-value=91 Score=30.90 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=58.8
Q ss_pred HHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCC-----C-CccccchHHHHhhcCcchhhHhhhcCchhc
Q 014427 304 LQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFP-----I-DLEQFDRREQLKKSGLGKVIMFLSKSDEET 377 (425)
Q Consensus 304 Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LP-----I-d~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET 377 (425)
....|+++|++..|..-|. -++..|+..+|.+|.++= + ..+. -+..+.++|.=..|-.|..|+.+
T Consensus 393 ~~~~L~~~g~i~~L~~LL~------~~d~~i~~~~L~aL~nil~~~~~~~~~~~--~~~~iee~ggl~~ie~Lq~~~n~- 463 (510)
T 3ul1_B 393 QIVYLVHCGIIEPLMNLLS------AKDTKIIQVILDAISNIFQAAEKLGETEK--LSIMIEECGGLDKIEALQRHENE- 463 (510)
T ss_dssp HHHHHHHTTCHHHHHHGGG------CSCHHHHHHHHHHHHHHHHHHHTTTCHHH--HHHHHHHTTHHHHHHHGGGCSSH-
T ss_pred HHHHHHHCCCHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHhHhccchHH--HHHHHHHcCcHHHHHHHHcCCCH-
Confidence 3456889999999998885 356789999988887652 1 1111 13457788888889999988654
Q ss_pred HHHHHHHHHHHHHhh
Q 014427 378 TSNRKLAKDLVDKWS 392 (425)
Q Consensus 378 ~eNKrlA~~LI~kWS 392 (425)
++..+|..||+++.
T Consensus 464 -~i~~~A~~iie~yf 477 (510)
T 3ul1_B 464 -SVYKASLNLIEKYF 477 (510)
T ss_dssp -HHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHC
Confidence 68889999999974
No 12
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=40.02 E-value=97 Score=25.77 Aligned_cols=80 Identities=23% Similarity=0.297 Sum_probs=58.8
Q ss_pred hHHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHHHHH
Q 014427 303 QLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTSNRK 382 (425)
Q Consensus 303 ~Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~eNKr 382 (425)
.....+++.|++..|-..|.- ++..+|...+.+|.+|-.... ..+..+.+.|+-..++.+-.+ ..+.+++
T Consensus 129 ~~~~~~~~~~~i~~L~~ll~~------~~~~v~~~a~~aL~~l~~~~~--~~~~~~~~~g~i~~L~~ll~~--~~~~v~~ 198 (210)
T 4db6_A 129 EQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGN--EQKQAVKEAGALEKLEQLQSH--ENEKIQK 198 (210)
T ss_dssp HHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHHTSCH--HHHHHHHHTTHHHHHHHGGGC--SCHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHcC------CCHHHHHHHHHHHHHHHcCCc--HHHHHHHHCCCHHHHHHHHhC--CCHHHHH
Confidence 344568889999999988863 578999999999999854321 236678888876666666655 5677888
Q ss_pred HHHHHHHHhh
Q 014427 383 LAKDLVDKWS 392 (425)
Q Consensus 383 lA~~LI~kWS 392 (425)
.|-.++...+
T Consensus 199 ~a~~aL~~l~ 208 (210)
T 4db6_A 199 EAQEALEKLQ 208 (210)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 8888876543
No 13
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=34.99 E-value=1.9e+02 Score=27.54 Aligned_cols=81 Identities=17% Similarity=0.153 Sum_probs=60.9
Q ss_pred hhHhHHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHH
Q 014427 300 SKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTS 379 (425)
Q Consensus 300 ~K~~Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~e 379 (425)
.....+..|.+.|++..|-.-|.- ++.+|+.....+|.+|--+.. .+..+.++|.-..++.|..|+ .++
T Consensus 448 ~~~~~~~~l~~~~~v~~l~~ll~~------~~~~v~~~a~~~l~~l~~~~~---~~~~i~~~~~~~~L~~l~~~~--~~~ 516 (529)
T 1jdh_A 448 RDVHNRIVIRGLNTIPLFVQLLYS------PIENIQRVAAGVLCELAQDKE---AAEAIEAEGATAPLTELLHSR--NEG 516 (529)
T ss_dssp TSHHHHHHHHHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHTTSHH---HHHHHHHTTCHHHHHHGGGCS--SHH
T ss_pred cCchHHHHHhccCCccHHHHHHcC------CchHHHHHHHHHHHHHhcCHH---HHHHHHHcCChHHHHHHhcCC--CHH
Confidence 345556778899999888877752 467899999999998864322 367888888888888888765 667
Q ss_pred HHHHHHHHHHHh
Q 014427 380 NRKLAKDLVDKW 391 (425)
Q Consensus 380 NKrlA~~LI~kW 391 (425)
++..|..++.+-
T Consensus 517 v~~~a~~aL~~l 528 (529)
T 1jdh_A 517 VATYAAAVLFRM 528 (529)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 888888887653
No 14
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=32.50 E-value=36 Score=33.76 Aligned_cols=54 Identities=24% Similarity=0.190 Sum_probs=39.2
Q ss_pred hhHHHHHHHhh--HhHHHHHHhhhhHHHHHHhhccCCCCC-----CCCHHHHHHHHHHHhcC
Q 014427 291 KLSLLTEVLSK--KQLQQEFLDHGVLTLLKNWLEPLPDGS-----LPNINIRAAILKILTEF 345 (425)
Q Consensus 291 mLpeV~~~L~K--~~Lq~~fLD~GiL~vLk~WLePLPDgS-----LPnl~IRt~LLkiL~~L 345 (425)
.|..+.-.|+. ..|...|+ ++++.+|..+|.-+.... -....++..++.||..+
T Consensus 87 ~L~sL~v~Lrt~~~sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkal 147 (383)
T 3eg5_B 87 CLESLRVSLTSHPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAF 147 (383)
T ss_dssp HHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCccHHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHH
Confidence 45555555654 58889998 778899999998764333 23578999999999877
No 15
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=32.30 E-value=2.5e+02 Score=24.28 Aligned_cols=59 Identities=19% Similarity=0.263 Sum_probs=43.0
Q ss_pred HHHHhhhHHHHHHHhhHhHHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcC
Q 014427 286 INKLKKLSLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEF 345 (425)
Q Consensus 286 l~KLkmLpeV~~~L~K~~Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~L 345 (425)
+.-|.+|..++.-|- ..+|..+-...+|+.|...+.|=-+|+-++..||+.+|.+|...
T Consensus 56 l~AL~LLe~~vkNCG-~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 114 (148)
T 1mhq_A 56 LYALTVLEMCMNHCG-EKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSW 114 (148)
T ss_dssp HHHHHHHHHHHHHSC-HHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-HHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHH
Confidence 444444554444322 47888899999999999988874445556789999999999765
No 16
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=31.96 E-value=2.4e+02 Score=24.01 Aligned_cols=81 Identities=19% Similarity=0.156 Sum_probs=58.6
Q ss_pred hHhHHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCCCCccccchH-HHHhhcCcchhhHhhhcCchhcHH
Q 014427 301 KKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFPIDLEQFDRR-EQLKKSGLGKVIMFLSKSDEETTS 379 (425)
Q Consensus 301 K~~Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LPId~e~~d~r-E~Lk~SGLGKVVmfL~K~p~ET~e 379 (425)
....+..+++.|++..|-..|.- ++..+|...+.+|.+|-.... .+ ..+..+|+=..++-+-+++ .+.
T Consensus 85 ~~~~~~~i~~~g~i~~L~~lL~~------~~~~v~~~a~~~L~~l~~~~~---~~~~~~~~~~~i~~L~~lL~~~--~~~ 153 (252)
T 4db8_A 85 GNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGN---EQIQAVIDAGALPALVQLLSSP--NEQ 153 (252)
T ss_dssp CHHHHHHHHHTTHHHHHHHGGGC------SCHHHHHHHHHHHHHHTTSCH---HHHHHHHHTTHHHHHHHGGGCS--CHH
T ss_pred CHHHHHHHHHcCCHHHHHHHHcC------CCHHHHHHHHHHHHHhhcCCc---hHHHHHHHCCCHHHHHHHHhCC--CHH
Confidence 36677889999999999998864 678999999999999965432 23 5677776666666555554 556
Q ss_pred HHHHHHHHHHHhh
Q 014427 380 NRKLAKDLVDKWS 392 (425)
Q Consensus 380 NKrlA~~LI~kWS 392 (425)
.+..|-..+..-+
T Consensus 154 v~~~a~~~L~~l~ 166 (252)
T 4db8_A 154 ILQEALWALSNIA 166 (252)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 6767766665544
No 17
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=29.88 E-value=2.6e+02 Score=27.78 Aligned_cols=72 Identities=17% Similarity=0.185 Sum_probs=47.7
Q ss_pred hhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHHHHHHHHHHHHHh
Q 014427 312 GVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKW 391 (425)
Q Consensus 312 GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~eNKrlA~~LI~kW 391 (425)
.+|..|..|+.. ++.+ +-.+++..|-||..|.-+.. +....|+...+..|... ..-+.+|..|-.||..-
T Consensus 118 ~lf~~L~~~~~~-~~~~--~~~l~KR~LsII~~L~~~~~------~F~~~~m~~L~~ly~~~-~~d~~~k~Kvl~li~d~ 187 (315)
T 3qml_C 118 KIMAALSNLNDS-NHRS--SNILIKRYLSILNELPVTSE------DLPIYSTVVLQNVYERN-NKDKQLQIKVLELISKI 187 (315)
T ss_dssp HHHHHHHHHHCC---CC--CHHHHHHHHHHHHHSCCCST------TC--CCHHHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc-ccch--hHHHHHHHHHHHHHHhcChH------hhhhccHHHHHHHHccC-CCCHHHHHHHHHHHHHH
Confidence 344556776633 2223 45999999999999987653 34566776666666643 56889999888888776
Q ss_pred hh
Q 014427 392 SR 393 (425)
Q Consensus 392 SR 393 (425)
-.
T Consensus 188 f~ 189 (315)
T 3qml_C 188 LK 189 (315)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 18
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=25.58 E-value=1.3e+02 Score=26.20 Aligned_cols=60 Identities=23% Similarity=0.257 Sum_probs=42.0
Q ss_pred HHHHHhhhHHHHHHHhhHhHHHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcC
Q 014427 285 AINKLKKLSLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEF 345 (425)
Q Consensus 285 Al~KLkmLpeV~~~L~K~~Lq~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~L 345 (425)
++.-|.+|..++.-| -..+|..+-...+|+.|..-+.|=-+|+-++..||+.+|.+|...
T Consensus 65 ~l~AL~LLe~cvkNC-G~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 124 (149)
T 3g2s_A 65 AIQALTVLETCMKSC-GKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW 124 (149)
T ss_dssp HHHHHHHHHHHHHHC-CHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc-CHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHH
Confidence 344444455544432 246777788888888888888774345567789999999999765
No 19
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=24.37 E-value=3.3e+02 Score=23.12 Aligned_cols=77 Identities=19% Similarity=0.160 Sum_probs=54.4
Q ss_pred HHHHHhhhhHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcCCCCccccchHHHHhhcCcchhhHhhhcCchhcHHHHHHH
Q 014427 305 QQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTEFPIDLEQFDRREQLKKSGLGKVIMFLSKSDEETTSNRKLA 384 (425)
Q Consensus 305 q~~fLD~GiL~vLk~WLePLPDgSLPnl~IRt~LLkiL~~LPId~e~~d~rE~Lk~SGLGKVVmfL~K~p~ET~eNKrlA 384 (425)
...|++.|++..|-..|.- ++..+|...+.+|.+|-.... ..+..+..+|+-..++.+-+++ .+..+..|
T Consensus 47 ~~~~~~~g~i~~L~~lL~~------~~~~v~~~a~~~L~~l~~~~~--~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a 116 (252)
T 4db8_A 47 IQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGN--EQIQAVIDAGALPALVQLLSSP--NEQILQEA 116 (252)
T ss_dssp HHHHHHTTHHHHHHHGGGC------SCHHHHHHHHHHHHHHTTSCH--HHHHHHHHTTHHHHHHHGGGCS--CHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHcC------CCHHHHHHHHHHHHHHhcCCH--HHHHHHHHcCCHHHHHHHHcCC--CHHHHHHH
Confidence 4568888999999888864 347899999999999976322 2467777777666666666664 46677666
Q ss_pred HHHHHHh
Q 014427 385 KDLVDKW 391 (425)
Q Consensus 385 ~~LI~kW 391 (425)
-..+..-
T Consensus 117 ~~~L~~l 123 (252)
T 4db8_A 117 LWALSNI 123 (252)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6655443
No 20
>3clj_A Protein NRD1; CTD-interacting domain, nucleus, phosphoprotein, RNA polymer binding protein, RNA binding protein; 2.10A {Saccharomyces cerevisiae}
Probab=21.40 E-value=2.6e+02 Score=24.98 Aligned_cols=64 Identities=16% Similarity=0.064 Sum_probs=39.8
Q ss_pred HHHHHHhhccccccccCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCChHHHHHhhhHHHHHHH
Q 014427 235 EEIKELFKMGKKRKKNEKSPAEIALLVENVMAEL--EVTAEEDAELNRQGKPAINKLKKLSLLTEVL 299 (425)
Q Consensus 235 dei~~llk~~KkKkk~~~s~~Ei~~~v~~Li~~M--~~AAeeD~ean~~gkPAl~KLkmLpeV~~~L 299 (425)
.+|++.|....-=| -..|...|..+..--+..+ ..+..+-.+...++.|+++||--|=-|.++.
T Consensus 4 ~ef~~~L~sL~~lk-p~iS~skI~~LT~~A~~nv~~~~~iv~~l~~~ikk~p~~hKL~~LYVvDSIv 69 (157)
T 3clj_A 4 QNFVATLESFKDLK-SGISGSRIKKLTTYALDHIDIESKIISLIIDYSRLCPDSHKLGSLYIIDSIG 69 (157)
T ss_dssp HHHHHHHHGGGGCS-SSCCHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCcceeeeeeehHHHH
Confidence 35666665444333 5677777776644433332 3344455777777899999998877666653
Done!