BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014429
(424 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZNU6|DET1_SOLLC Light-mediated development protein DET1 OS=Solanum lycopersicum
GN=DET1 PE=1 SV=1
Length = 523
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/425 (76%), Positives = 366/425 (86%), Gaps = 15/425 (3%)
Query: 1 MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQY 60
MF++ NVT+R+FERQI TPAPGTS+H ARRFYEN+VPS+T+YD+ECPDHSFRKFTDDG Y
Sbjct: 1 MFKTNNVTARLFERQICTPAPGTSIHRARRFYENVVPSYTIYDVECPDHSFRKFTDDGLY 60
Query: 61 LISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELIC 120
+SFSRNHQDL+VYRP WL+FSCKEEDC HDLP KA++FESFFTQLYSVTLAS ELIC
Sbjct: 61 FVSFSRNHQDLVVYRPTWLTFSCKEEDCDTHDLPLKARKFESFFTQLYSVTLASSGELIC 120
Query: 121 KDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFH 180
KDFFL ME NQFGLFATSTAQIHDAP TG AIQGVP +EKITFHLLRL DG +LDE+VFH
Sbjct: 121 KDFFLYMESNQFGLFATSTAQIHDAPPTGGAIQGVPSVEKITFHLLRLVDGAILDERVFH 180
Query: 181 NDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLIS 240
ND++NLAH++G FLYDDLLAIVSLRYQ IHILQ+RD G+LVDVR IG FCREDDELFL S
Sbjct: 181 NDYVNLAHSIGAFLYDDLLAIVSLRYQRIHILQIRDSGDLVDVRAIGEFCREDDELFLNS 240
Query: 241 NSQSLATSERSRLNPFPGNQVGNG--HNQVNQDDSFLSGIKQRLLSFIFQGMWNEETDQA 298
NSQ L N VGNG H+ + SFLSGIKQRLLS+IF+G+WN E DQ
Sbjct: 241 NSQVLV------------NHVGNGFHHSLPQSETSFLSGIKQRLLSYIFRGIWN-EADQT 287
Query: 299 MRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNM 358
MRVQ LKKKF+FHFQDY+DLIIWKVQFLDRHHLLIKFGSVDGGVSRN D HP+FFAVYNM
Sbjct: 288 MRVQCLKKKFYFHFQDYIDLIIWKVQFLDRHHLLIKFGSVDGGVSRNADIHPSFFAVYNM 347
Query: 359 ETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKG 418
ETTE+VAFYQNSA+ELYFLFE F DHFH +S++SLHMNF+SSHSNN++ALEQLR KNK
Sbjct: 348 ETTEIVAFYQNSADELYFLFELFSDHFHVSSKSSLHMNFMSSHSNNIHALEQLRCTKNKA 407
Query: 419 GSFSQ 423
+FSQ
Sbjct: 408 TNFSQ 412
>sp|P48732|DET1_ARATH Light-mediated development protein DET1 OS=Arabidopsis thaliana
GN=DET1 PE=1 SV=2
Length = 543
Score = 587 bits (1512), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/433 (67%), Positives = 353/433 (81%), Gaps = 11/433 (2%)
Query: 1 MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQY 60
MF S NVT+R+FERQIRTP PG SV+ AR FYEN+VPS+T+YD+E PDH FRKFT+DG +
Sbjct: 1 MFTSGNVTARVFERQIRTPPPGASVNRARHFYENLVPSYTLYDVESPDHCFRKFTEDGLF 60
Query: 61 LISFSRNHQDLIVYRPMWLSFSCKEEDCCR-HDLPPKAKRFESFFTQLYSVTLASCNELI 119
LISFSRNHQ+LIVYRP WL++S ++ LP +A +F+SFFTQLYSV LAS NELI
Sbjct: 61 LISFSRNHQELIVYRPSWLTYSTTDDSTTTLPPLPRRASKFDSFFTQLYSVNLASSNELI 120
Query: 120 CKDFFLSMEGNQFGLFATSTAQIHDAPT-TGRAIQGVPFIEKITFHLLRLEDGVVLDEKV 178
CKDFFL + +FGLFATSTAQIHD+ + + A+ GVP I+KITF LLRL+DGVVLDE+V
Sbjct: 121 CKDFFLYHQTRRFGLFATSTAQIHDSSSPSNDAVPGVPSIDKITFVLLRLDDGVVLDERV 180
Query: 179 FHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFL 238
F +DF+NLAHNMGVFLYDDLLAI+SLRYQ IH+LQ+RD G+LVD R IG FCREDDELFL
Sbjct: 181 FLHDFVNLAHNMGVFLYDDLLAILSLRYQRIHLLQIRDSGHLVDARAIGYFCREDDELFL 240
Query: 239 ISNSQSLATSERSRLNPFPGNQVGN-GHN-------QVNQDDSFLSGIKQRLLSFIFQGM 290
S+SQ++ + ++S+ G++ + G N Q + +SFLSG+KQRLLSFIF+ +
Sbjct: 241 NSSSQAMMSQDKSKQQSLSGSKEDDTGENGLRHSLSQPSGSNSFLSGVKQRLLSFIFREI 300
Query: 291 WNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHP 350
WNEE+D MRVQSLKKKF+FHFQDYVDLIIWKVQFLDR HLLIKFGSVDGGV+R+ DHHP
Sbjct: 301 WNEESDNVMRVQSLKKKFYFHFQDYVDLIIWKVQFLDRQHLLIKFGSVDGGVTRSADHHP 360
Query: 351 AFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQ 410
AFFAVYNMETT++VAFYQNSAE+LY LFE+F DHF +S MNF++SHSNNVYALEQ
Sbjct: 361 AFFAVYNMETTDIVAFYQNSAEDLYQLFEQFSDHFTVSSSTPF-MNFVTSHSNNVYALEQ 419
Query: 411 LRSIKNKGGSFSQ 423
L+ KNK SFSQ
Sbjct: 420 LKYTKNKSNSFSQ 432
>sp|Q9D0A0|DET1_MOUSE DET1 homolog OS=Mus musculus GN=Det1 PE=2 SV=2
Length = 550
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 221/437 (50%), Gaps = 52/437 (11%)
Query: 6 NVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFS 65
NV R+ R+I + GT H R F++N+ P+FTV ++E P RKF+ DG+Y I+FS
Sbjct: 17 NVIHRLERRRISSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFS 76
Query: 66 RNHQDLIVYRPMWLSFSCKE-EDCCR-------------HDLPPKAKRFESFFTQLYSVT 111
+ L +Y C+ ED + + + + FE FF L+
Sbjct: 77 SDQTSLEIYEYQ----GCQAAEDLLQGYEGEILSNGNDQRSVSIRGRLFERFFVLLHITN 132
Query: 112 LASCNELICKDFFLSMEGNQFGLFATSTAQIHDAP--------TTGRAIQGVPF--IEKI 161
+A+ E + ++ L + + + S A + D P ++ P +E
Sbjct: 133 VAANGEHLNRECSLFTDDCR-CVIVGSAAYLPDEPHPPFYEVYRNSESVTPNPRSPLEDY 191
Query: 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLV 221
+ H++ L G + D + F D + L+HN G++LY ++LAI+S++ QTIH+ QV G +
Sbjct: 192 SLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGTFI 251
Query: 222 DVRTIGSFCREDDELFLISN-SQSLATSERSRLNPFPGNQVGNGHNQVNQDDSFLSGIKQ 280
DVRTIG FC EDD L + + + S+ NPF D F++ +K
Sbjct: 252 DVRTIGRFCYEDDLLTVSAVFPEVQRDSQTGMANPF--------------RDPFINSLKH 297
Query: 281 RLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDG 340
RLL ++++ E+ AM K++FF +F L +WK+Q LD +HL IK+ S D
Sbjct: 298 RLLVYLWRRA--EQDGSAM----AKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSEDV 351
Query: 341 GVSRNVDHHPA-FFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFIS 399
R D A FF VYNM TTEV+A ++N+++EL LFE FCD F + +S + F
Sbjct: 352 VTLRVTDPSQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHS-EVQFPC 410
Query: 400 SHSNNVYALEQLRSIKN 416
S S+N +A + R K+
Sbjct: 411 SASSNNFARQIQRRFKD 427
>sp|Q7L5Y6|DET1_HUMAN DET1 homolog OS=Homo sapiens GN=DET1 PE=1 SV=2
Length = 550
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 221/437 (50%), Gaps = 52/437 (11%)
Query: 6 NVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFS 65
NV R+ R+I + GT H R F++N+ P+FTV ++E P RKF+ DG+Y I+FS
Sbjct: 17 NVIHRLERRRISSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFS 76
Query: 66 RNHQDLIVYRPMWLSFSCKE-EDCCR-------------HDLPPKAKRFESFFTQLYSVT 111
+ L +Y C+ ED + + + + FE FF L+
Sbjct: 77 SDQTSLEIYEYQ----GCQAAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFVLLHITN 132
Query: 112 LASCNELICKDFFLSMEGNQFGLFATSTAQIHDAP--------TTGRAIQGVPF--IEKI 161
+A+ E + ++ L + + + S A + D P ++ P +E
Sbjct: 133 VAANGEHLNRECSLFTDDCR-CVIVGSAAYLPDEPHPPFFEVYRNSESVTPNPRSPLEDY 191
Query: 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLV 221
+ H++ L G + D + F D + L+HN G++LY ++LAI+S++ QTIH+ QV G +
Sbjct: 192 SLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGTFI 251
Query: 222 DVRTIGSFCREDDELFLISN-SQSLATSERSRLNPFPGNQVGNGHNQVNQDDSFLSGIKQ 280
DVRTIG FC EDD L + + + S+ NPF D F++ +K
Sbjct: 252 DVRTIGRFCYEDDLLTVSAVFPEVQRDSQTGMANPF--------------RDPFINSLKH 297
Query: 281 RLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDG 340
RLL ++++ E+ AM K++FF +F L +WK+Q LD +HL IK+ S D
Sbjct: 298 RLLVYLWRRA--EQDGSAM----AKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSEDV 351
Query: 341 GVSRNVDHHPA-FFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFIS 399
R D A FF VYNM TTEV+A ++N+++EL LFE FCD F + +S + F
Sbjct: 352 VTLRVTDPSQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHS-EVQFPC 410
Query: 400 SHSNNVYALEQLRSIKN 416
S S+N +A + R K+
Sbjct: 411 SASSNNFARQIQRRFKD 427
>sp|O05242|O16G3_BACSU Probable oligo-1,6-glucosidase 3 OS=Bacillus subtilis (strain 168)
GN=yugT PE=3 SV=2
Length = 554
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 256 FPGNQVGNGHNQVNQDDSFLSGIKQRLLSFIFQ----GMWNEETDQAMRVQSLKKKFFFH 311
+P VG + ++ + +G K + S IFQ G+W+ E ++++ + + K+
Sbjct: 249 YPIMTVGEANGVAAKEAADWAGEKNGIFSMIFQFEHLGLWDVEINESIDIVAF-KRILTD 307
Query: 312 FQDYVDLIIWKVQFLDRH 329
+QD ++ I W F++ H
Sbjct: 308 WQDSLEGIGWNALFMENH 325
>sp|O74946|DPOA2_SCHPO DNA polymerase alpha subunit B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pol12 PE=1 SV=1
Length = 574
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 280 QRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVD 339
Q + +I G W+ D + LK + ++ VDL+I FLD +H+LI+ G++
Sbjct: 302 QPISIYIASGPWSLRDD--LSFSPLKSMISYVNKNPVDLVILCGPFLDINHILIRTGNIT 359
Query: 340 GGVSRNVDH 348
G + +++
Sbjct: 360 GTSATSLEE 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,114,415
Number of Sequences: 539616
Number of extensions: 6430312
Number of successful extensions: 15893
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 15872
Number of HSP's gapped (non-prelim): 14
length of query: 424
length of database: 191,569,459
effective HSP length: 120
effective length of query: 304
effective length of database: 126,815,539
effective search space: 38551923856
effective search space used: 38551923856
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)