Query 014429
Match_columns 424
No_of_seqs 78 out of 80
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 11:24:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3scy_A Hypothetical bacterial 94.5 2.1 7.1E-05 39.7 17.3 133 52-226 160-302 (361)
2 3u4y_A Uncharacterized protein 94.1 0.86 2.9E-05 41.3 13.4 125 52-228 133-263 (331)
3 3u4y_A Uncharacterized protein 93.7 0.6 2E-05 42.4 11.4 115 53-216 182-304 (331)
4 3hfq_A Uncharacterized protein 93.1 5 0.00017 36.8 16.8 129 52-226 146-281 (347)
5 3scy_A Hypothetical bacterial 92.8 3.1 0.00011 38.5 15.1 127 53-224 217-346 (361)
6 1ri6_A Putative isomerase YBHE 92.8 2.8 9.4E-05 37.6 14.2 121 52-224 43-168 (343)
7 2vdu_B TRNA (guanine-N(7)-)-me 92.0 3.1 0.00011 40.2 14.5 124 53-227 202-352 (450)
8 1l0q_A Surface layer protein; 91.5 3.9 0.00013 37.9 14.1 119 52-227 37-157 (391)
9 3hfq_A Uncharacterized protein 91.4 6 0.00021 36.2 15.1 134 47-228 87-231 (347)
10 1ri6_A Putative isomerase YBHE 90.7 5.1 0.00018 35.8 13.6 128 53-226 184-319 (343)
11 1nir_A Nitrite reductase; hemo 90.4 2.2 7.6E-05 43.8 12.2 26 50-76 182-207 (543)
12 3vgz_A Uncharacterized protein 90.4 6.7 0.00023 35.4 14.2 77 124-228 236-314 (353)
13 1jof_A Carboxy-CIS,CIS-muconat 90.3 4.3 0.00015 38.2 13.3 127 53-217 199-342 (365)
14 4ery_A WD repeat-containing pr 90.1 6.4 0.00022 35.5 13.8 31 46-77 192-222 (312)
15 1l0q_A Surface layer protein; 89.4 8.4 0.00029 35.6 14.3 114 52-222 121-238 (391)
16 4a11_B DNA excision repair pro 89.2 4.4 0.00015 37.1 12.1 27 52-78 192-218 (408)
17 2gop_A Trilobed protease; beta 88.7 14 0.00047 33.6 15.2 50 124-173 109-164 (347)
18 1jof_A Carboxy-CIS,CIS-muconat 88.7 6.7 0.00023 36.9 13.3 138 48-226 42-186 (365)
19 2hqs_A Protein TOLB; TOLB, PAL 87.4 9.4 0.00032 37.0 13.8 76 52-173 272-347 (415)
20 2j04_A TAU60, YPL007P, hypothe 87.2 6.3 0.00021 42.2 13.3 123 51-227 134-263 (588)
21 2ecf_A Dipeptidyl peptidase IV 87.2 5.6 0.00019 40.8 12.6 37 121-175 290-326 (741)
22 2ojh_A Uncharacterized protein 86.2 5.6 0.00019 34.3 10.3 84 52-173 178-261 (297)
23 1xfd_A DIP, dipeptidyl aminope 86.1 8.6 0.00029 39.2 13.2 26 52-77 178-203 (723)
24 3vgz_A Uncharacterized protein 85.0 21 0.00073 32.0 14.7 124 53-227 95-225 (353)
25 1r5m_A SIR4-interacting protei 84.9 23 0.00079 32.3 14.5 25 50-75 112-136 (425)
26 2z3z_A Dipeptidyl aminopeptida 84.6 19 0.00064 36.7 14.9 32 124-171 263-294 (706)
27 3dw8_B Serine/threonine-protei 84.3 7 0.00024 36.7 10.8 28 48-77 287-314 (447)
28 2aq5_A Coronin-1A; WD40 repeat 84.3 20 0.00067 33.7 14.0 122 50-225 180-309 (402)
29 3fm0_A Protein CIAO1; WDR39,SG 83.9 23 0.00077 32.9 14.1 29 48-77 18-46 (345)
30 3lrv_A PRE-mRNA-splicing facto 83.4 11 0.00037 34.8 11.6 119 50-219 174-295 (343)
31 3mmy_A MRNA export factor; mRN 83.0 25 0.00085 31.4 13.5 51 160-217 150-200 (368)
32 1gxr_A ESG1, transducin-like e 83.0 18 0.00061 32.0 12.4 116 52-223 103-220 (337)
33 3fm0_A Protein CIAO1; WDR39,SG 82.4 17 0.00057 33.8 12.5 25 52-77 67-91 (345)
34 2ojh_A Uncharacterized protein 82.3 23 0.00078 30.3 13.8 26 52-77 134-159 (297)
35 3vu4_A KMHSV2; beta-propeller 81.5 21 0.00071 33.4 12.9 28 50-77 199-226 (355)
36 3azo_A Aminopeptidase; POP fam 81.4 26 0.00089 35.3 14.4 81 124-219 135-229 (662)
37 2pm7_B Protein transport prote 81.1 19 0.00065 32.5 12.1 24 53-77 16-39 (297)
38 3bws_A Protein LP49; two-domai 81.0 36 0.0012 31.8 15.6 121 53-215 309-431 (433)
39 3mkq_A Coatomer beta'-subunit; 80.9 14 0.00046 38.1 12.2 50 159-214 449-502 (814)
40 3pe7_A Oligogalacturonate lyas 80.8 22 0.00076 32.6 12.7 37 125-182 87-123 (388)
41 3vu4_A KMHSV2; beta-propeller 80.5 21 0.00072 33.4 12.6 47 162-216 82-128 (355)
42 3azo_A Aminopeptidase; POP fam 80.4 12 0.0004 37.9 11.4 35 125-172 194-229 (662)
43 2ynn_A Coatomer subunit beta'; 80.2 13 0.00045 33.8 10.8 108 52-216 19-128 (304)
44 1qks_A Cytochrome CD1 nitrite 80.1 32 0.0011 35.8 14.9 32 196-228 353-385 (567)
45 4h5i_A Guanine nucleotide-exch 79.2 37 0.0013 32.0 13.9 37 42-79 11-53 (365)
46 3zwl_B Eukaryotic translation 79.1 35 0.0012 30.4 15.8 28 49-77 35-62 (369)
47 2vdu_B TRNA (guanine-N(7)-)-me 78.9 17 0.00059 34.9 11.6 28 50-77 106-133 (450)
48 1sq9_A Antiviral protein SKI8; 78.7 27 0.00094 32.0 12.5 28 50-77 237-266 (397)
49 4g56_B MGC81050 protein; prote 77.9 9.3 0.00032 36.0 9.2 17 53-69 49-65 (357)
50 1nir_A Nitrite reductase; hemo 77.6 31 0.0011 35.2 13.7 28 49-77 225-256 (543)
51 3sfz_A APAF-1, apoptotic pepti 77.5 28 0.00097 38.0 14.0 77 51-178 620-696 (1249)
52 1pby_B Quinohemoprotein amine 77.5 37 0.0013 29.9 13.9 129 53-228 40-174 (337)
53 3jrp_A Fusion protein of prote 77.4 21 0.00073 32.1 11.1 25 52-77 17-41 (379)
54 4aow_A Guanine nucleotide-bind 76.9 37 0.0013 30.1 12.5 24 53-77 222-245 (340)
55 1k32_A Tricorn protease; prote 76.8 26 0.00091 38.2 13.6 18 50-67 56-73 (1045)
56 3gre_A Serine/threonine-protei 76.6 50 0.0017 31.0 14.5 128 52-222 117-250 (437)
57 2mad_H Methylamine dehydrogena 76.5 57 0.002 31.5 15.4 61 162-229 299-363 (373)
58 1qks_A Cytochrome CD1 nitrite 76.2 8.5 0.00029 40.2 9.1 103 53-177 246-380 (567)
59 4a5s_A Dipeptidyl peptidase 4 75.1 12 0.0004 39.2 9.9 25 53-77 177-201 (740)
60 1erj_A Transcriptional repress 74.7 58 0.002 30.7 14.7 114 52-221 129-242 (393)
61 3i2n_A WD repeat-containing pr 74.5 23 0.00079 31.7 10.5 28 50-77 22-52 (357)
62 1erj_A Transcriptional repress 74.3 55 0.0019 30.8 13.6 25 52-77 262-286 (393)
63 3c5m_A Oligogalacturonate lyas 73.0 11 0.00037 34.6 8.0 14 160-173 319-332 (396)
64 4ery_A WD repeat-containing pr 72.2 39 0.0013 30.2 11.5 27 50-77 153-179 (312)
65 4aez_A CDC20, WD repeat-contai 72.2 65 0.0022 30.2 13.5 122 52-226 223-345 (401)
66 4gqb_B Methylosome protein 50; 71.6 41 0.0014 31.7 12.0 53 161-220 149-204 (344)
67 2hqs_A Protein TOLB; TOLB, PAL 70.4 19 0.00066 34.8 9.5 33 123-173 358-390 (415)
68 3vl1_A 26S proteasome regulato 70.3 61 0.0021 29.9 12.7 26 51-77 144-169 (420)
69 3ow8_A WD repeat-containing pr 70.1 22 0.00076 32.8 9.5 25 52-77 212-236 (321)
70 3dw8_B Serine/threonine-protei 70.0 35 0.0012 31.9 11.0 26 50-77 181-206 (447)
71 1jmx_B Amine dehydrogenase; ox 69.9 60 0.002 28.9 13.3 55 162-224 276-332 (349)
72 3sfz_A APAF-1, apoptotic pepti 69.8 75 0.0026 34.7 15.0 25 52-77 663-687 (1249)
73 1pgu_A Actin interacting prote 69.7 51 0.0018 32.0 12.5 120 50-224 164-290 (615)
74 3ow8_A WD repeat-containing pr 68.9 21 0.00072 33.0 9.1 112 52-221 170-283 (321)
75 3bws_A Protein LP49; two-domai 68.5 76 0.0026 29.5 16.5 121 53-223 218-340 (433)
76 3mkq_A Coatomer beta'-subunit; 67.8 46 0.0016 34.1 12.2 110 53-220 20-132 (814)
77 4e54_B DNA damage-binding prot 67.7 26 0.0009 33.5 9.8 24 53-77 303-326 (435)
78 3vl1_A 26S proteasome regulato 67.7 31 0.001 32.0 10.0 24 53-77 63-86 (420)
79 4a11_B DNA excision repair pro 66.6 75 0.0026 28.7 12.5 29 48-77 45-74 (408)
80 3dwl_C Actin-related protein 2 66.1 7.3 0.00025 35.8 5.3 28 49-77 14-41 (377)
81 4e54_B DNA damage-binding prot 64.9 32 0.0011 32.9 9.8 26 52-77 256-281 (435)
82 3zwl_B Eukaryotic translation 64.6 77 0.0026 28.1 15.2 130 50-223 119-255 (369)
83 2pbi_B Guanine nucleotide-bind 64.4 91 0.0031 29.0 14.3 29 48-77 66-94 (354)
84 1gxr_A ESG1, transducin-like e 64.1 75 0.0026 27.8 14.2 27 49-77 54-80 (337)
85 2ymu_A WD-40 repeat protein; u 63.0 15 0.0005 36.0 7.1 24 53-77 515-538 (577)
86 4h5i_A Guanine nucleotide-exch 62.4 6 0.00021 37.5 4.1 24 53-77 319-342 (365)
87 4ggc_A P55CDC, cell division c 61.3 83 0.0029 27.5 14.7 81 53-184 32-112 (318)
88 1pgu_A Actin interacting prote 61.2 1.2E+02 0.004 29.5 13.1 26 51-77 211-237 (615)
89 2iwa_A Glutamine cyclotransfer 60.6 8.4 0.00029 36.7 4.7 74 162-240 45-123 (266)
90 1yfq_A Cell cycle arrest prote 60.4 22 0.00076 31.7 7.3 26 51-77 16-41 (342)
91 3f3f_A Nucleoporin SEH1; struc 59.6 88 0.003 27.1 14.8 25 52-77 17-41 (351)
92 2bkl_A Prolyl endopeptidase; m 58.9 83 0.0028 32.5 12.3 57 160-219 294-352 (695)
93 3gre_A Serine/threonine-protei 57.9 35 0.0012 32.0 8.6 25 52-77 220-244 (437)
94 1vyh_C Platelet-activating fac 57.1 75 0.0026 30.2 10.9 25 52-77 156-180 (410)
95 2pm9_A Protein WEB1, protein t 57.1 59 0.002 29.9 9.7 49 162-216 286-337 (416)
96 3jro_A Fusion protein of prote 56.5 71 0.0024 33.6 11.4 25 52-77 15-39 (753)
97 3dwl_C Actin-related protein 2 54.4 1E+02 0.0035 28.0 10.9 25 52-77 152-176 (377)
98 3dm0_A Maltose-binding peripla 53.9 1.6E+02 0.0055 30.1 13.3 26 52-78 478-503 (694)
99 1vyh_C Platelet-activating fac 53.5 96 0.0033 29.5 10.9 26 51-77 113-138 (410)
100 3v7d_B Cell division control p 53.2 85 0.0029 29.7 10.4 25 52-77 316-340 (464)
101 3f3f_A Nucleoporin SEH1; struc 53.1 1.1E+02 0.0039 26.4 10.7 26 52-78 116-143 (351)
102 1yr2_A Prolyl oligopeptidase; 52.0 1.8E+02 0.0061 30.3 13.5 71 127-219 324-396 (741)
103 2ece_A 462AA long hypothetical 51.9 41 0.0014 34.9 8.4 105 53-188 327-445 (462)
104 3jrp_A Fusion protein of prote 51.7 1.3E+02 0.0045 26.8 14.2 32 196-228 268-299 (379)
105 2xdw_A Prolyl endopeptidase; a 51.6 2.2E+02 0.0075 29.3 14.6 15 52-66 238-252 (710)
106 1k8k_C P40, ARP2/3 complex 41 51.0 1.4E+02 0.0047 26.7 13.8 26 51-77 101-126 (372)
107 3dsm_A Uncharacterized protein 50.6 1.3E+02 0.0045 27.7 11.1 119 53-227 178-311 (328)
108 1got_B GT-beta; complex (GTP-b 50.5 1.3E+02 0.0043 27.6 10.9 24 53-77 233-256 (340)
109 3sjl_D Methylamine dehydrogena 49.4 46 0.0016 33.3 8.2 38 123-179 141-178 (386)
110 1got_B GT-beta; complex (GTP-b 46.8 1.7E+02 0.0059 26.7 11.6 27 50-77 101-127 (340)
111 2z3z_A Dipeptidyl aminopeptida 45.8 67 0.0023 32.6 8.9 26 52-77 361-388 (706)
112 2pbi_B Guanine nucleotide-bind 45.3 1.5E+02 0.005 27.5 10.6 25 52-77 246-270 (354)
113 2ynn_A Coatomer subunit beta'; 41.8 1.9E+02 0.0066 25.8 13.4 104 51-205 189-301 (304)
114 3lrv_A PRE-mRNA-splicing facto 40.5 25 0.00086 32.3 4.4 26 52-77 266-291 (343)
115 1nr0_A Actin interacting prote 40.1 3E+02 0.01 27.6 15.7 27 50-76 151-177 (611)
116 4aow_A Guanine nucleotide-bind 39.9 21 0.00072 31.7 3.6 25 52-77 312-336 (340)
117 3frx_A Guanine nucleotide-bind 39.9 20 0.0007 32.8 3.6 26 51-77 291-316 (319)
118 3odt_A Protein DOA1; ubiquitin 39.0 1.9E+02 0.0065 24.9 10.9 56 162-224 247-303 (313)
119 2w18_A PALB2, fancn, partner a 38.7 21 0.0007 35.9 3.6 24 52-76 332-355 (356)
120 4gq1_A NUP37; propeller, trans 35.7 26 0.00089 33.3 3.7 26 53-80 366-391 (393)
121 1r5m_A SIR4-interacting protei 33.6 26 0.0009 31.9 3.3 30 48-78 396-425 (425)
122 3mbr_X Glutamine cyclotransfer 33.0 1.1E+02 0.0036 28.9 7.4 61 162-227 44-104 (243)
123 3frx_A Guanine nucleotide-bind 32.8 2.3E+02 0.0077 25.6 9.5 24 53-77 24-48 (319)
124 4aez_A CDC20, WD repeat-contai 32.3 3.1E+02 0.011 25.4 14.3 114 49-218 94-207 (401)
125 2mad_H Methylamine dehydrogena 31.9 1.7E+02 0.0059 28.1 9.0 91 53-176 263-356 (373)
126 3v7d_B Cell division control p 31.3 3.3E+02 0.011 25.5 12.8 111 49-216 271-381 (464)
127 1yr2_A Prolyl oligopeptidase; 31.1 1.6E+02 0.0056 30.6 9.2 35 125-175 169-203 (741)
128 2ymu_A WD-40 repeat protein; u 30.3 34 0.0012 33.4 3.6 25 53-78 64-88 (577)
129 1sq9_A Antiviral protein SKI8; 29.8 3.1E+02 0.011 24.7 15.4 79 123-221 238-326 (397)
130 1yfq_A Cell cycle arrest prote 28.9 3E+02 0.01 24.2 11.3 24 53-77 200-224 (342)
131 3nol_A Glutamine cyclotransfer 28.4 1.2E+02 0.0041 28.9 7.0 61 162-227 66-126 (262)
132 3e5z_A Putative gluconolactona 27.4 3.2E+02 0.011 24.0 12.1 158 54-225 76-275 (296)
133 2oaj_A Protein SNI1; WD40 repe 27.3 1.8E+02 0.0062 31.6 9.0 92 53-173 24-132 (902)
134 1pby_B Quinohemoprotein amine 27.3 3.1E+02 0.011 23.8 9.9 84 124-228 39-135 (337)
135 1k8k_C P40, ARP2/3 complex 41 25.9 3.5E+02 0.012 24.0 10.1 73 124-225 14-91 (372)
136 3c5m_A Oligogalacturonate lyas 25.8 40 0.0014 30.8 3.0 25 53-77 357-381 (396)
137 3pe7_A Oligogalacturonate lyas 25.3 43 0.0015 30.7 3.1 25 53-77 357-381 (388)
138 3k26_A Polycomb protein EED; W 24.7 56 0.0019 29.1 3.7 25 52-77 341-365 (366)
139 3iuj_A Prolyl endopeptidase; h 24.6 5.9E+02 0.02 26.2 14.9 50 160-214 304-355 (693)
140 2ovr_B FBW7, F-BOX/WD repeat p 24.4 4.4E+02 0.015 24.6 14.1 117 47-223 118-234 (445)
141 3iz6_a 40S ribosomal protein R 24.4 54 0.0019 30.7 3.7 26 53-79 351-376 (380)
142 3dm0_A Maltose-binding peripla 24.0 5.8E+02 0.02 25.8 12.0 25 53-77 389-413 (694)
143 3jro_A Fusion protein of prote 23.7 39 0.0013 35.5 2.8 25 53-78 261-285 (753)
144 2xdp_A Lysine-specific demethy 23.3 1E+02 0.0035 26.5 4.9 65 157-223 29-106 (123)
145 3elq_A Arylsulfate sulfotransf 22.7 2.3E+02 0.0077 30.2 8.4 119 98-229 229-394 (571)
146 4gga_A P55CDC, cell division c 22.6 50 0.0017 31.3 3.1 22 53-75 371-392 (420)
147 1fwx_A Nitrous oxide reductase 22.0 54 0.0018 35.1 3.5 26 52-77 282-307 (595)
148 3ei3_B DNA damage-binding prot 21.2 4.6E+02 0.016 23.7 15.1 29 49-78 76-105 (383)
No 1
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.55 E-value=2.1 Score=39.72 Aligned_cols=133 Identities=16% Similarity=0.177 Sum_probs=74.2
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
-.|+|||++|++-+.....+.||+....+.... .+ ..... ...-...+..+.. . + ...|..||+
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~-~~----~l~~~--------~~~~~~~~~~~~~-~-~-~~~~spdg~ 223 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADN-KE----KFLTK--------GTPEAFKVAPGSG-P-R-HLIFNSDGK 223 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTT-CC----CCEEE--------EEEEEEECCTTCC-E-E-EEEECTTSS
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCccc-cc----ceeec--------ccccceecCCCCC-C-e-EEEEcCCCC
Confidence 479999999988887788899998862110000 00 00000 0001112222221 1 1 356789999
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccc--------eEEeeccceeeeecceeeeee
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHND--------FINLAHNMGVFLYDDLLAIVS 203 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D--------~I~LsHN~Gv~Ly~dlLAILS 203 (424)
++.++... +=++.++|+.+|.+.-...+... -|.++.+ +..|++..
T Consensus 224 ~l~v~~~~--------------------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spd------g~~l~v~~ 277 (361)
T 3scy_A 224 FAYLINEI--------------------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPD------GKYLYASN 277 (361)
T ss_dssp EEEEEETT--------------------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTT------SSEEEEEE
T ss_pred EEEEEcCC--------------------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCC------CCEEEEEC
Confidence 98886321 12478899999876433333221 2333332 23455555
Q ss_pred ec-eeEEEEEEEc-cCCeEEEeeee
Q 014429 204 LR-YQTIHILQVR-DLGNLVDVRTI 226 (424)
Q Consensus 204 ~q-~QtIhi~qI~-~~G~fv~vrtI 226 (424)
.. .-+|.||.+. .+|++..+..+
T Consensus 278 ~~~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 278 RLKADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp CSSSCEEEEEEECTTTCCEEEEEEE
T ss_pred CCCCCEEEEEEEcCCCCcEEEeeEe
Confidence 55 6899999996 46887666654
No 2
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.15 E-value=0.86 Score=41.34 Aligned_cols=125 Identities=10% Similarity=0.065 Sum_probs=73.5
Q ss_pred eeeCCCCCeEEEeeCCCce-EEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCc
Q 014429 52 RKFTDDGQYLISFSRNHQD-LIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGN 130 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~s-L~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dg 130 (424)
-.|+|||++|++-+.+... +.+|+....+ . +. ... ...+..+... ...-|..||
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g-------------~----~~----~~~-~~~~~~~~~~---~~~~~spdg 187 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADG-------------V----LF----DTG-QEFISGGTRP---FNITFTPDG 187 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTC-------------C----EE----EEE-EEEECSSSSE---EEEEECTTS
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCC-------------c----Ee----ecC-CccccCCCCc---cceEECCCC
Confidence 3699999988877777666 9999986211 0 00 010 0111222221 345678899
Q ss_pred eEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceE---eeeeeeccceEEeeccceeeee--cceeeeeeec
Q 014429 131 QFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV---LDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLR 205 (424)
Q Consensus 131 ryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v---~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q 205 (424)
+++++++.. +-+++++|+++|.+ ..+.. .. ..-.++.+. +..|.+.+-.
T Consensus 188 ~~l~v~~~~--------------------~~~v~v~d~~~~~~~~~~~~~~--~~----~~~~~~~~spdg~~l~v~~~~ 241 (331)
T 3u4y_A 188 NFAFVANLI--------------------GNSIGILETQNPENITLLNAVG--TN----NLPGTIVVSRDGSTVYVLTES 241 (331)
T ss_dssp SEEEEEETT--------------------TTEEEEEECSSTTSCEEEEEEE--CS----SCCCCEEECTTSSEEEEECSS
T ss_pred CEEEEEeCC--------------------CCeEEEEECCCCcccceeeecc--CC----CCCceEEECCCCCEEEEEEcC
Confidence 998886421 22588999999987 43322 21 122244444 3456666666
Q ss_pred eeEEEEEEEccCCeEEEeeeeCC
Q 014429 206 YQTIHILQVRDLGNLVDVRTIGS 228 (424)
Q Consensus 206 ~QtIhi~qI~~~G~fv~vrtIG~ 228 (424)
.-+|+++.+. +|+...+.++..
T Consensus 242 ~~~i~~~d~~-~~~~~~~~~~~~ 263 (331)
T 3u4y_A 242 TVDVFNFNQL-SGTLSFVKSFGH 263 (331)
T ss_dssp EEEEEEEETT-TTEEEEEEEEEC
T ss_pred CCEEEEEECC-CCceeeeccccc
Confidence 7789988775 588866666554
No 3
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.67 E-value=0.6 Score=42.39 Aligned_cols=115 Identities=14% Similarity=0.083 Sum_probs=66.8
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCceE
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgry 132 (424)
.|+|||++|++-+.....|.||+... ++ . .+....+.. ++.. ....|..||++
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~-------~~------~---------~~~~~~~~~--~~~~---~~~~~spdg~~ 234 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQN-------PE------N---------ITLLNAVGT--NNLP---GTIVVSRDGST 234 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSS-------TT------S---------CEEEEEEEC--SSCC---CCEEECTTSSE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCC-------Cc------c---------cceeeeccC--CCCC---ceEEECCCCCE
Confidence 69999999888887788899998751 10 0 001122221 1111 13457889999
Q ss_pred EEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccc------eEEeeccceeee--ecceeeeeee
Q 014429 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHND------FINLAHNMGVFL--YDDLLAIVSL 204 (424)
Q Consensus 133 vivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D------~I~LsHN~Gv~L--y~dlLAILS~ 204 (424)
+.+++. .+=+++++|+++|.+.--..+... .+..+ .++.+ -+..|+|-+-
T Consensus 235 l~v~~~--------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 235 VYVLTE--------------------STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGA--NQMALNKTETKLFISAN 292 (331)
T ss_dssp EEEECS--------------------SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTC--CCEEECTTSSEEEEEET
T ss_pred EEEEEc--------------------CCCEEEEEECCCCceeeecccccccccCCCCcccc--cceEECCCCCEEEEecC
Confidence 888632 122488899999988333332221 00000 11222 2446777777
Q ss_pred ceeEEEEEEEcc
Q 014429 205 RYQTIHILQVRD 216 (424)
Q Consensus 205 q~QtIhi~qI~~ 216 (424)
...+|.|+.+..
T Consensus 293 ~~~~v~v~d~~~ 304 (331)
T 3u4y_A 293 ISRELKVFTISG 304 (331)
T ss_dssp TTTEEEEEETTS
T ss_pred CCCcEEEEEecC
Confidence 778899999863
No 4
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.10 E-value=5 Score=36.77 Aligned_cols=129 Identities=14% Similarity=0.191 Sum_probs=67.2
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
=.|+|||+ |++-+.....+.+|+... + +.. +..-...+..+... + ..-|..||+
T Consensus 146 ~~~spdg~-l~v~~~~~~~v~~~~~~~-~-----g~~----------------~~~~~~~~~~g~~p--~-~~~~spdg~ 199 (347)
T 3hfq_A 146 TDLTPDNR-LAVIDLGSDKVYVYNVSD-A-----GQL----------------SEQSVLTMEAGFGP--R-HLVFSPDGQ 199 (347)
T ss_dssp EEECTTSC-EEEEETTTTEEEEEEECT-T-----SCE----------------EEEEEEECCTTCCE--E-EEEECTTSS
T ss_pred EEECCCCc-EEEEeCCCCEEEEEEECC-C-----CcE----------------EEeeeEEcCCCCCC--c-eEEECCCCC
Confidence 46899999 777676677888888751 0 100 01111122222111 1 256788999
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEcc--CceEeeeeeeccceE---Eeeccceeeee--cceeeeeee
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLE--DGVVLDEKVFHNDFI---NLAHNMGVFLY--DDLLAIVSL 204 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~--~G~v~D~~~f~~D~I---~LsHN~Gv~Ly--~dlLAILS~ 204 (424)
++++++... . ++.++|+. +|.+.-...+...-- ....-.++.+- +..|+|.+-
T Consensus 200 ~l~v~~~~~------------------~--~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 200 YAFLAGELS------------------S--QIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EEEEEETTT------------------T--EEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEeCCC------------------C--EEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 988853211 1 23445544 576543332221100 00001122222 335666666
Q ss_pred ceeEEEEEEEccCCeEEEeeee
Q 014429 205 RYQTIHILQVRDLGNLVDVRTI 226 (424)
Q Consensus 205 q~QtIhi~qI~~~G~fv~vrtI 226 (424)
...+|.+|.+.++|.+..+.++
T Consensus 260 ~~~~v~v~~~~~~g~~~~~~~~ 281 (347)
T 3hfq_A 260 GYNTLAVFAVTADGHLTLIQQI 281 (347)
T ss_dssp TTTEEEEEEECGGGCEEEEEEE
T ss_pred CCCEEEEEEECCCCcEEEeEEE
Confidence 7789999999877876666554
No 5
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.83 E-value=3.1 Score=38.52 Aligned_cols=127 Identities=12% Similarity=0.141 Sum_probs=69.2
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCceE
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgry 132 (424)
.|+|||++|.+-+.....|.||++.. +.. +....+.....+..-.. ..-|..||++
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~~-------g~~----------------~~~~~~~~~~~~~~~~~-~i~~spdg~~ 272 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYAD-------GML----------------DEIQTVAADTVNAQGSG-DIHLSPDGKY 272 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEET-------TEE----------------EEEEEEESCSSCCCCEE-EEEECTTSSE
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEecC-------Cce----------------EEeEEEecCCCCCCCcc-cEEECCCCCE
Confidence 69999999888887778899998861 100 01111111111100011 3457889999
Q ss_pred EEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeeeceeEEE
Q 014429 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTIH 210 (424)
Q Consensus 133 vivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~QtIh 210 (424)
+.++.... -..+.++-+|.++|.+.-...+... ..-.++.+- +..|++-+-..-+|.
T Consensus 273 l~v~~~~~-----------------~~~i~v~~~~~~~g~~~~~~~~~~g----~~~~~~~~spdg~~l~~~~~~~~~v~ 331 (361)
T 3scy_A 273 LYASNRLK-----------------ADGVAIFKVDETNGTLTKVGYQLTG----IHPRNFIITPNGKYLLVACRDTNVIQ 331 (361)
T ss_dssp EEEEECSS-----------------SCEEEEEEECTTTCCEEEEEEEECS----SCCCEEEECTTSCEEEEEETTTTEEE
T ss_pred EEEECCCC-----------------CCEEEEEEEcCCCCcEEEeeEecCC----CCCceEEECCCCCEEEEEECCCCCEE
Confidence 87753220 0123333344467865433333321 111233333 446677766778999
Q ss_pred EEEEc-cCCeEEEee
Q 014429 211 ILQVR-DLGNLVDVR 224 (424)
Q Consensus 211 i~qI~-~~G~fv~vr 224 (424)
+|.+. .+|++..+.
T Consensus 332 v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 332 IFERDQATGLLTDIK 346 (361)
T ss_dssp EEEECTTTCCEEECS
T ss_pred EEEEECCCCcEeecc
Confidence 99996 468776654
No 6
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.75 E-value=2.8 Score=37.57 Aligned_cols=121 Identities=21% Similarity=0.182 Sum_probs=68.7
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
=.|+|||++|++-+.+...+.+|.....+ +. .+..-.+.. ++ . =...-|..||+
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~~~-----~~----------------~~~~~~~~~--~~-~--~~~~~~s~dg~ 96 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAPDD-----GA----------------LTFAAESAL--PG-S--LTHISTDHQGQ 96 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTT-----CC----------------EEEEEEEEC--SS-C--CSEEEECTTSS
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecCCC-----Cc----------------eeecccccc--CC-C--CcEEEEcCCCC
Confidence 36999999999999887899999885100 10 001111111 11 1 12334678999
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCce---EeeeeeeccceEEeeccceeeee--cceeeeeeece
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGV---VLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRY 206 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~---v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~ 206 (424)
++++++.. +-++.++|+.+|. +.... ... .+-.++.+- +..|++-+...
T Consensus 97 ~l~~~~~~--------------------~~~i~~~d~~~~~~~~~~~~~--~~~----~~~~~~~~s~dg~~l~~~~~~~ 150 (343)
T 1ri6_A 97 FVFVGSYN--------------------AGNVSVTRLEDGLPVGVVDVV--EGL----DGCHSANISPDNRTLWVPALKQ 150 (343)
T ss_dssp EEEEEETT--------------------TTEEEEEEEETTEEEEEEEEE--CCC----TTBCCCEECTTSSEEEEEEGGG
T ss_pred EEEEEecC--------------------CCeEEEEECCCCccccccccc--cCC----CCceEEEECCCCCEEEEecCCC
Confidence 98886421 1247788885543 22221 110 112233333 34666766677
Q ss_pred eEEEEEEEccCCeEEEee
Q 014429 207 QTIHILQVRDLGNLVDVR 224 (424)
Q Consensus 207 QtIhi~qI~~~G~fv~vr 224 (424)
.+|++|.+..+|++..+.
T Consensus 151 ~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp TEEEEEEECTTSCEEEEE
T ss_pred CEEEEEEecCCCceeeec
Confidence 889999998668776543
No 7
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.02 E-value=3.1 Score=40.22 Aligned_cols=124 Identities=14% Similarity=0.087 Sum_probs=72.7
Q ss_pred eeCCC---CCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecC
Q 014429 53 KFTDD---GQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEG 129 (424)
Q Consensus 53 KFTpD---G~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~d 129 (424)
.|+|| |++|++=|.| ..|.||.... +. .+ ......+.+...+ .-|. |
T Consensus 202 ~~sp~~~~~~~l~s~~~d-~~i~vwd~~~-------~~------~~------------~~~~~~h~~~v~~---~~~s-d 251 (450)
T 2vdu_B 202 HLIKDSDGHQFIITSDRD-EHIKISHYPQ-------CF------IV------------DKWLFGHKHFVSS---ICCG-K 251 (450)
T ss_dssp EEEECTTSCEEEEEEETT-SCEEEEEESC-------TT------CE------------EEECCCCSSCEEE---EEEC-S
T ss_pred EEcCCCCCCcEEEEEcCC-CcEEEEECCC-------Cc------ee------------eeeecCCCCceEE---EEEC-C
Confidence 79999 8888888876 5789998761 10 00 0000112222222 2233 8
Q ss_pred ceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeecc---ceEEeecc-----------------
Q 014429 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHN---DFINLAHN----------------- 189 (424)
Q Consensus 130 gryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~---D~I~LsHN----------------- 189 (424)
|++++.|+. +-++.|+|+.+|.......... ......|.
T Consensus 252 ~~~l~s~~~---------------------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (450)
T 2vdu_B 252 DYLLLSAGG---------------------DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV 310 (450)
T ss_dssp TTEEEEEES---------------------SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE
T ss_pred CCEEEEEeC---------------------CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEE
Confidence 999887642 2368999999998776655331 00000010
Q ss_pred ceeeee--cceeeeeeeceeEEEEEEE--ccCCeEEEeeeeC
Q 014429 190 MGVFLY--DDLLAIVSLRYQTIHILQV--RDLGNLVDVRTIG 227 (424)
Q Consensus 190 ~Gv~Ly--~dlLAILS~q~QtIhi~qI--~~~G~fv~vrtIG 227 (424)
.+|... +..|++-+-...+|+||.+ ...|++..+.+|.
T Consensus 311 ~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~ 352 (450)
T 2vdu_B 311 SKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT 352 (450)
T ss_dssp EEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec
Confidence 122222 5567776667899999999 5556777666664
No 8
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=91.54 E-value=3.9 Score=37.86 Aligned_cols=119 Identities=9% Similarity=0.100 Sum_probs=70.2
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
-.|+|||++|++-+.....|.+|.... ++ ....+... + .+ -..-|..||+
T Consensus 37 ~~~s~dg~~l~~~~~~d~~i~v~d~~~-------~~------------------~~~~~~~~--~-~v--~~~~~spdg~ 86 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTAT-------NN------------------VIATVPAG--S-SP--QGVAVSPDGK 86 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTT-------TE------------------EEEEEECS--S-SE--EEEEECTTSS
T ss_pred EEECCCCCEEEEECCCCCeEEEEECCC-------Ce------------------EEEEEECC--C-Cc--cceEECCCCC
Confidence 479999999876665667888887641 11 11111211 1 11 2345778999
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeeeceeEE
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTI 209 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~QtI 209 (424)
+++++.+. +-+++++|+.+|.+.......... .++.+. +..|++.+-...+|
T Consensus 87 ~l~~~~~~--------------------~~~v~v~d~~~~~~~~~~~~~~~~------~~~~~s~dg~~l~~~~~~~~~v 140 (391)
T 1l0q_A 87 QVYVTNMA--------------------SSTLSVIDTTSNTVAGTVKTGKSP------LGLALSPDGKKLYVTNNGDKTV 140 (391)
T ss_dssp EEEEEETT--------------------TTEEEEEETTTTEEEEEEECSSSE------EEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEEECC--------------------CCEEEEEECCCCeEEEEEeCCCCc------ceEEECCCCCEEEEEeCCCCEE
Confidence 98886321 135899999999876655433322 133333 33555555556788
Q ss_pred EEEEEccCCeEEEeeeeC
Q 014429 210 HILQVRDLGNLVDVRTIG 227 (424)
Q Consensus 210 hi~qI~~~G~fv~vrtIG 227 (424)
+++.+. +|+.+..-..|
T Consensus 141 ~~~d~~-~~~~~~~~~~~ 157 (391)
T 1l0q_A 141 SVINTV-TKAVINTVSVG 157 (391)
T ss_dssp EEEETT-TTEEEEEEECC
T ss_pred EEEECC-CCcEEEEEecC
Confidence 888876 46666554444
No 9
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.35 E-value=6 Score=36.22 Aligned_cols=134 Identities=10% Similarity=0.015 Sum_probs=72.3
Q ss_pred CCceeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCC-------CCeee
Q 014429 47 PDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLAS-------CNELI 119 (424)
Q Consensus 47 P~~~lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~-------~~e~L 119 (424)
.|+.+ .|+|||++|++-+.+...+.||..... +.. +....+.... .+...
T Consensus 87 ~p~~~-a~spdg~~l~~~~~~~~~v~v~~~~~~------g~~----------------~~~~~~~~~~~~p~~~~~~~~~ 143 (347)
T 3hfq_A 87 PPAYV-AVDEARQLVYSANYHKGTAEVMKIAAD------GAL----------------TLTDTVQHSGHGPRPEQDGSHI 143 (347)
T ss_dssp CCSEE-EEETTTTEEEEEETTTTEEEEEEECTT------SCE----------------EEEEEEECCCCCSSTTCSSCCE
T ss_pred CCEEE-EECCCCCEEEEEeCCCCEEEEEEeCCC------CCe----------------eecceeecCCCCCCccccCCCc
Confidence 34554 489999999988878889999988510 000 0000011000 01111
Q ss_pred eeeeeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEcc-CceEeeeeeeccceEEeeccceeeee--c
Q 014429 120 CKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLE-DGVVLDEKVFHNDFINLAHNMGVFLY--D 196 (424)
Q Consensus 120 ~refsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~-~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~ 196 (424)
.+..+..||+ ++++ ... +=+++++|+. +|.+.-...+....= +.-.++.+- +
T Consensus 144 --~~~~~spdg~-l~v~-~~~-------------------~~~v~~~~~~~~g~~~~~~~~~~~~g--~~p~~~~~spdg 198 (347)
T 3hfq_A 144 --HYTDLTPDNR-LAVI-DLG-------------------SDKVYVYNVSDAGQLSEQSVLTMEAG--FGPRHLVFSPDG 198 (347)
T ss_dssp --EEEEECTTSC-EEEE-ETT-------------------TTEEEEEEECTTSCEEEEEEEECCTT--CCEEEEEECTTS
T ss_pred --eEEEECCCCc-EEEE-eCC-------------------CCEEEEEEECCCCcEEEeeeEEcCCC--CCCceEEECCCC
Confidence 2456778999 5543 211 1157888888 776543322211100 000122332 2
Q ss_pred ceeeeeeeceeEEEEEEEcc-CCeEEEeeeeCC
Q 014429 197 DLLAIVSLRYQTIHILQVRD-LGNLVDVRTIGS 228 (424)
Q Consensus 197 dlLAILS~q~QtIhi~qI~~-~G~fv~vrtIG~ 228 (424)
..|++.+-.-.+|.+|.+.. +|++..+..+..
T Consensus 199 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 231 (347)
T 3hfq_A 199 QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT 231 (347)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEEEEEEEEES
T ss_pred CEEEEEeCCCCEEEEEEecCCCCceEEeeeeee
Confidence 35666666778899999875 688877766654
No 10
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=90.71 E-value=5.1 Score=35.78 Aligned_cols=128 Identities=9% Similarity=0.076 Sum_probs=69.3
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEE-cCC--CCeeeeeeeeEEecC
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVT-LAS--CNELICKDFFLSMEG 129 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~-la~--~~e~L~refsLft~d 129 (424)
.|+|||++|++-+.....+.+|.....+ +. ++....+. +.. .+..-. ...-|..|
T Consensus 184 ~~~pdg~~l~~~~~~~~~i~~~~~~~~~-----g~----------------~~~~~~~~~~~~~~~~~~~~-~~i~~s~d 241 (343)
T 1ri6_A 184 VFHPNEQYAYCVNELNSSVDVWELKDPH-----GN----------------IECVQTLDMMPENFSDTRWA-ADIHITPD 241 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEESSCTT-----SC----------------CEEEEEEECSCTTCCSCCCE-EEEEECTT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCC-----Cc----------------EEEEeeccccCccccccCCc-cceEECCC
Confidence 4999999998888778889999885211 00 00011111 111 111111 13457789
Q ss_pred ceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEcc--CceEeeeeeeccceEEeeccceeeee--cceeeeeeec
Q 014429 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLE--DGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLR 205 (424)
Q Consensus 130 gryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~--~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q 205 (424)
|++++++... +=++.++|+. +|...-...+.... .-.++.+- ++.|++-+-.
T Consensus 242 g~~l~v~~~~--------------------~~~i~v~d~~~~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~ 297 (343)
T 1ri6_A 242 GRHLYACDRT--------------------ASLITVFSVSEDGSVLSKEGFQPTET----QPRGFNVDHSGKYLIAAGQK 297 (343)
T ss_dssp SSEEEEEETT--------------------TTEEEEEEECTTSCCEEEEEEEECSS----SCCCEEECTTSSEEEEECTT
T ss_pred CCEEEEEecC--------------------CCEEEEEEEcCCCCceEEeeeecCCC----ccceEEECCCCCEEEEecCC
Confidence 9998775321 1146777777 44333222222110 01233333 4456666656
Q ss_pred eeEEEEEEEcc-CCeEEEeeee
Q 014429 206 YQTIHILQVRD-LGNLVDVRTI 226 (424)
Q Consensus 206 ~QtIhi~qI~~-~G~fv~vrtI 226 (424)
..+|.||.+.. .|++..+..|
T Consensus 298 ~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 298 SHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp TCEEEEEEEETTTTEEEEEEEE
T ss_pred CCeEEEEEEcCCCceeeEcccc
Confidence 68999999964 5777666654
No 11
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=90.38 E-value=2.2 Score=43.77 Aligned_cols=26 Identities=15% Similarity=0.429 Sum_probs=22.8
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEee
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRP 76 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry 76 (424)
+.=.|||||++|.+-|.| ..|.+|..
T Consensus 182 ~~v~~spdg~~l~v~~~d-~~V~v~D~ 207 (543)
T 1nir_A 182 HISRMSASGRYLLVIGRD-ARIDMIDL 207 (543)
T ss_dssp EEEEECTTSCEEEEEETT-SEEEEEET
T ss_pred ceEEECCCCCEEEEECCC-CeEEEEEC
Confidence 455799999999999999 88999887
No 12
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=90.37 E-value=6.7 Score=35.39 Aligned_cols=77 Identities=8% Similarity=0.105 Sum_probs=49.8
Q ss_pred eEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeee
Q 014429 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAI 201 (424)
Q Consensus 124 sLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAI 201 (424)
.-+..||+++.+++.. +-+++++|+.+|.+....... +..++.+- ++.|.|
T Consensus 236 ~~~s~dg~~l~~~~~~--------------------~~~v~~~d~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~v 288 (353)
T 3vgz_A 236 ISLDTARQRAFITDSK--------------------AAEVLVVDTRNGNILAKVAAP-------ESLAVLFNPARNEAYV 288 (353)
T ss_dssp EEEETTTTEEEEEESS--------------------SSEEEEEETTTCCEEEEEECS-------SCCCEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEeCC--------------------CCEEEEEECCCCcEEEEEEcC-------CCceEEECCCCCEEEE
Confidence 4567789988776321 125889999999887665532 22344443 345666
Q ss_pred eeeceeEEEEEEEccCCeEEEeeeeCC
Q 014429 202 VSLRYQTIHILQVRDLGNLVDVRTIGS 228 (424)
Q Consensus 202 LS~q~QtIhi~qI~~~G~fv~vrtIG~ 228 (424)
.+-...+|+++.+. +|+.+..-..|.
T Consensus 289 ~~~~~~~v~~~d~~-~~~~~~~~~~~~ 314 (353)
T 3vgz_A 289 THRQAGKVSVIDAK-SYKVVKTFDTPT 314 (353)
T ss_dssp EETTTTEEEEEETT-TTEEEEEEECCS
T ss_pred EECCCCeEEEEECC-CCeEEEEEecCC
Confidence 66667889998876 477776555543
No 13
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=90.33 E-value=4.3 Score=38.22 Aligned_cols=127 Identities=11% Similarity=0.047 Sum_probs=67.9
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEE-cCCC--Cee-------eeee
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVT-LASC--NEL-------ICKD 122 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~-la~~--~e~-------L~re 122 (424)
.|||||++|..-+.+...+.||++... + +. ... ....+. ++.+ +.. -..+
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~----~-g~-------~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 258 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPA----T-HM-------PVY--------THHSFPLIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTT----T-CC-------EEE--------EEEEEESSCTTCCCBCTTTSSBSEEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCC----C-Cc-------EEE--------ccceEEcCCCCcCCccccccccccccc
Confidence 699999999877777778999988510 0 10 000 001111 1111 111 2344
Q ss_pred eeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEcc-CceEeeeee-eccceEEeeccceeeee-----
Q 014429 123 FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLE-DGVVLDEKV-FHNDFINLAHNMGVFLY----- 195 (424)
Q Consensus 123 fsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~-~G~v~D~~~-f~~D~I~LsHN~Gv~Ly----- 195 (424)
...|..||+++.++....- . -..-++.++|+. +|.+.-... ... .-..-.++.+-
T Consensus 259 i~~~spdG~~l~v~~~~~~-~--------------~~~~~i~v~~~~~~g~~~~~~~~~~~---~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 259 VCALTFSGKYMFASSRANK-F--------------ELQGYIAGFKLRDCGSIEKQLFLSPT---PTSGGHSNAVSPCPWS 320 (365)
T ss_dssp EEEECTTSSEEEEEEEESS-T--------------TSCCEEEEEEECTTSCEEEEEEEEEC---SSCCTTCCCEEECTTC
T ss_pred EEEECCCCCEEEEECCCCC-C--------------CCCCeEEEEEECCCCCEEEeeeeeec---CCCCcccceecCCCcC
Confidence 5548899999977543210 0 011246777775 787543211 110 00011233332
Q ss_pred cceeeeeeeceeEEEEEEEccC
Q 014429 196 DDLLAIVSLRYQTIHILQVRDL 217 (424)
Q Consensus 196 ~dlLAILS~q~QtIhi~qI~~~ 217 (424)
+..|++-+-...+|.||.+..+
T Consensus 321 g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETT
T ss_pred CCEEEEEEcCCCeEEEEEEchh
Confidence 5677777766689999999753
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=90.12 E-value=6.4 Score=35.45 Aligned_cols=31 Identities=26% Similarity=0.528 Sum_probs=24.5
Q ss_pred CCCceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 46 CPDHSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 46 ~P~~~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.++...-.|+|||++|++-+.| ..|.||...
T Consensus 192 ~~~~~~~~~~~~~~~l~~~~~d-~~i~iwd~~ 222 (312)
T 4ery_A 192 NPPVSFVKFSPNGKYILAATLD-NTLKLWDYS 222 (312)
T ss_dssp CCCEEEEEECTTSSEEEEEETT-TEEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEcCC-CeEEEEECC
Confidence 3455667899999999997776 479999876
No 15
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=89.39 E-value=8.4 Score=35.60 Aligned_cols=114 Identities=9% Similarity=0.120 Sum_probs=65.4
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
-.|+|||++|++-+.+...|.+|.... +. ....+.. +.. . ....|..||+
T Consensus 121 ~~~s~dg~~l~~~~~~~~~v~~~d~~~-------~~------------------~~~~~~~--~~~-~--~~~~~~~dg~ 170 (391)
T 1l0q_A 121 LALSPDGKKLYVTNNGDKTVSVINTVT-------KA------------------VINTVSV--GRS-P--KGIAVTPDGT 170 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTT-------TE------------------EEEEEEC--CSS-E--EEEEECTTSS
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCC-------Cc------------------EEEEEec--CCC-c--ceEEECCCCC
Confidence 368999999866666677888876541 10 1111111 111 1 3455788999
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeee--cee
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSL--RYQ 207 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~--q~Q 207 (424)
++++++.. +-+++++|+.+|.+.......... .++.+- +..|++-+- ...
T Consensus 171 ~l~~~~~~--------------------~~~v~~~d~~~~~~~~~~~~~~~~------~~~~~~~~g~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 171 KVYVANFD--------------------SMSISVIDTVTNSVIDTVKVEAAP------SGIAVNPEGTKAYVTNVDKYFN 224 (391)
T ss_dssp EEEEEETT--------------------TTEEEEEETTTTEEEEEEECSSEE------EEEEECTTSSEEEEEEECSSCC
T ss_pred EEEEEeCC--------------------CCEEEEEECCCCeEEEEEecCCCc------cceEECCCCCEEEEEecCcCCC
Confidence 98775321 125899999999876554432211 122222 345666664 456
Q ss_pred EEEEEEEccCCeEEE
Q 014429 208 TIHILQVRDLGNLVD 222 (424)
Q Consensus 208 tIhi~qI~~~G~fv~ 222 (424)
+|+++.+. .|+.+.
T Consensus 225 ~v~~~d~~-~~~~~~ 238 (391)
T 1l0q_A 225 TVSMIDTG-TNKITA 238 (391)
T ss_dssp EEEEEETT-TTEEEE
T ss_pred cEEEEECC-CCeEEE
Confidence 78888776 355443
No 16
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=89.17 E-value=4.4 Score=37.14 Aligned_cols=27 Identities=4% Similarity=0.156 Sum_probs=22.3
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecC
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMW 78 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g 78 (424)
-.|+|||+++++.+.....|.+|..+.
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 469999999777777778899999873
No 17
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=88.74 E-value=14 Score=33.61 Aligned_cols=50 Identities=18% Similarity=0.043 Sum_probs=25.1
Q ss_pred eEEecCceEEEEEeeccccCCCCCCCCCCc------CCCCcceeEEEEEEccCceE
Q 014429 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQ------GVPFIEKITFHLLRLEDGVV 173 (424)
Q Consensus 124 sLft~dgryvivasa~~~~~~~~~~ne~v~------~~P~le~ytfhlVdL~~G~v 173 (424)
.-+..||+++++++........+..-+.++ +...-....++++|+.+|..
T Consensus 109 ~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 109 LEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred eeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 346789999998765321110010000000 00112357899999999976
No 18
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=88.68 E-value=6.7 Score=36.87 Aligned_cols=138 Identities=7% Similarity=-0.025 Sum_probs=71.3
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEe
Q 014429 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSM 127 (424)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft 127 (424)
+.++ -|+|||++|++-+.+ .+.+|+... + ++. ........++. .+ ...+.
T Consensus 42 ~~~~-a~spdg~~l~~~~~~--~v~~~~~~~-----~-g~~------------------~~~~~~~~~g~-~~--~~~~s 91 (365)
T 1jof_A 42 ISWM-TFDHERKNIYGAAMK--KWSSFAVKS-----P-TEI------------------VHEASHPIGGH-PR--ANDAD 91 (365)
T ss_dssp CSEE-EECTTSSEEEEEEBT--EEEEEEEEE-----T-TEE------------------EEEEEEECCSS-GG--GGCTT
T ss_pred CcEE-EECCCCCEEEEEccc--eEEEEEECC-----C-CCE------------------EEeeEeecCCC-Cc--cEEEC
Confidence 4444 599999999888877 788887630 0 100 00011111121 11 25567
Q ss_pred cCceEEEEEeeccccCCCCCCCCCCcC--CCCc-ceeEEEEEEcc-CceEeeeeee-ccceEEeeccceeeee--cceee
Q 014429 128 EGNQFGLFATSTAQIHDAPTTGRAIQG--VPFI-EKITFHLLRLE-DGVVLDEKVF-HNDFINLAHNMGVFLY--DDLLA 200 (424)
Q Consensus 128 ~dgryvivasa~~~~~~~~~~ne~v~~--~P~l-e~ytfhlVdL~-~G~v~D~~~f-~~D~I~LsHN~Gv~Ly--~dlLA 200 (424)
.||++++++++.. +.... ++.. .+=++.++++. +|.+...... ..+ .-+|-.++.+- +..|+
T Consensus 92 pdg~~l~~~~~~~---------~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 92 TNTRAIFLLAAKQ---------PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQ--ENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp SCCEEEEEEECSS---------TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECC--TTCCEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEecC---------CcceeccceeecCCceEEEEccCCCCcCcceEeeEEeC--CCCcceEEEECCCCCEEE
Confidence 8999765544320 00000 0000 22356788886 6876543221 000 01233344444 33566
Q ss_pred eeeeceeEEEEEEEccCCeEEEeeee
Q 014429 201 IVSLRYQTIHILQVRDLGNLVDVRTI 226 (424)
Q Consensus 201 ILS~q~QtIhi~qI~~~G~fv~vrtI 226 (424)
+-+.-..+|++|.+.++|++..+.++
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~ 186 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSV 186 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeE
Confidence 66666678999999756888666554
No 19
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=87.35 E-value=9.4 Score=37.05 Aligned_cols=76 Identities=16% Similarity=0.081 Sum_probs=44.5
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
-.|||||++|+.-|.+.....||.+.-.+ ++ .+ + +...+... . ..-|..||+
T Consensus 272 ~~~spdg~~l~~~s~~~g~~~i~~~d~~~-----~~-------~~-~-------------l~~~~~~~-~-~~~~spdG~ 323 (415)
T 2hqs_A 272 PTWFPDSQNLAFTSDQAGRPQVYKVNING-----GA-------PQ-R-------------ITWEGSQN-Q-DADVSSDGK 323 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTS-----SC-------CE-E-------------CCCSSSEE-E-EEEECTTSS
T ss_pred eEECCCCCEEEEEECCCCCcEEEEEECCC-----CC-------EE-E-------------EecCCCcc-c-CeEECCCCC
Confidence 37999999988777655555566553100 10 00 0 01111111 1 245678999
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceE
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV 173 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v 173 (424)
++++++... .+.+++++|+.+|.+
T Consensus 324 ~l~~~~~~~------------------g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 324 FMVMVSSNG------------------GQQHIAKQDLATGGV 347 (415)
T ss_dssp EEEEEEECS------------------SCEEEEEEETTTCCE
T ss_pred EEEEEECcC------------------CceEEEEEECCCCCE
Confidence 998875421 156899999999976
No 20
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=87.24 E-value=6.3 Score=42.19 Aligned_cols=123 Identities=11% Similarity=0.080 Sum_probs=67.3
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCC---CeeeeeeeeEEe
Q 014429 51 FRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASC---NELICKDFFLSM 127 (424)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~---~e~L~refsLft 127 (424)
==-|||||++|.+=+.| ..|.||...+-. . .+.. |-...++..... +... ..-|.
T Consensus 134 svafSPDG~~LAsgs~D-GtVkIWd~~~~~--l------------~~~~----~i~l~ti~~~~~gh~~~V~---sVawS 191 (588)
T 2j04_A 134 CFEWNPIESSIVVGNED-GELQFFSIRKNS--E------------NTPE----FYFESSIRLSDAGSKDWVT---HIVWY 191 (588)
T ss_dssp EEEECSSSSCEEEEETT-SEEEEEECCCCT--T------------TCCC----CEEEEEEECSCTTCCCCEE---EEEEE
T ss_pred EEEEcCCCCEEEEEcCC-CEEEEEECCCCc--c------------cccc----ceeeeeeecccccccccEE---EEEEc
Confidence 34689999998887765 459999987310 0 0000 112222222221 1222 22344
Q ss_pred cCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEe---eee-eeccceEEeeccceeeeecceeeeee
Q 014429 128 EGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVL---DEK-VFHNDFINLAHNMGVFLYDDLLAIVS 203 (424)
Q Consensus 128 ~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~---D~~-~f~~D~I~LsHN~Gv~Ly~dlLAILS 203 (424)
+|| +++++. |-+++++|+.++.+. .+. ..+.+.| .+|...+..||+.+
T Consensus 192 Pdg---Laass~--------------------D~tVrlWd~~~~~~~~~~~tL~~~h~~~V-----~svaFsg~~LASa~ 243 (588)
T 2j04_A 192 EDV---LVAALS--------------------NNSVFSMTVSASSHQPVSRMIQNASRRKI-----TDLKIVDYKVVLTC 243 (588)
T ss_dssp TTE---EEEEET--------------------TCCEEEECCCSSSSCCCEEEEECCCSSCC-----CCEEEETTEEEEEC
T ss_pred CCc---EEEEeC--------------------CCeEEEEECCCCccccceeeecccccCcE-----EEEEEECCEEEEEe
Confidence 788 333222 335899999888732 111 1222222 23333378999888
Q ss_pred eceeEEEEEEEccCCeEEEeeeeC
Q 014429 204 LRYQTIHILQVRDLGNLVDVRTIG 227 (424)
Q Consensus 204 ~q~QtIhi~qI~~~G~fv~vrtIG 227 (424)
.++|+++.+.. |+...... |
T Consensus 244 --~~tIkLWd~~~-~~~~~~~~-g 263 (588)
T 2j04_A 244 --PGYVHKIDLKN-YSISSLKT-G 263 (588)
T ss_dssp --SSEEEEEETTT-TEEEEEEC-S
T ss_pred --CCeEEEEECCC-CeEEEEEc-C
Confidence 58999999884 66644443 6
No 21
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.20 E-value=5.6 Score=40.78 Aligned_cols=37 Identities=11% Similarity=-0.039 Sum_probs=25.7
Q ss_pred eeeeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEee
Q 014429 121 KDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLD 175 (424)
Q Consensus 121 refsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D 175 (424)
..++. .||+++++++... .-.+.+++++|+.+|...-
T Consensus 290 ~~~~~--pDg~~l~~~~~~~----------------~~~~~~i~~~d~~~g~~~~ 326 (741)
T 2ecf_A 290 ARVNW--RDPQHLSFQRQSR----------------DQKKLDLVEVTLASNQQRV 326 (741)
T ss_dssp EEEEE--EETTEEEEEEEET----------------TSSEEEEEEEETTTCCEEE
T ss_pred EEEEe--CCCCEEEEEEecc----------------cCCeEEEEEEECCCCceEE
Confidence 34444 8999999875422 1246789999999997543
No 22
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=86.23 E-value=5.6 Score=34.25 Aligned_cols=84 Identities=13% Similarity=0.153 Sum_probs=49.1
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
-.|+|||++|+.-+.....+.||.+.-.+ + .. ..+......+ ...-|..||+
T Consensus 178 ~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-----~-------~~--------------~~~~~~~~~~--~~~~~s~dg~ 229 (297)
T 2ojh_A 178 PDYSPDGRWIYFNSSRTGQMQIWRVRVDG-----S-------SV--------------ERITDSAYGD--WFPHPSPSGD 229 (297)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTS-----S-------CE--------------EECCCCSEEE--EEEEECTTSS
T ss_pred ceECCCCCEEEEEecCCCCccEEEECCCC-----C-------Cc--------------EEEecCCccc--CCeEECCCCC
Confidence 46899999888777655678888875100 0 00 0011111111 1245678999
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceE
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV 173 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v 173 (424)
++++++...... ..|.-.+.+++++|+.+|.+
T Consensus 230 ~l~~~~~~~~~~----------~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 230 KVVFVSYDADVF----------DHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEEEETTCC----------SCCSSEEEEEEEEETTSCSC
T ss_pred EEEEEEcCCCCC----------cccccCceEEEEEecCCCCc
Confidence 999876643211 12233457899999999864
No 23
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=86.09 E-value=8.6 Score=39.19 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=21.2
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|||||++|+.-+.|...+.+|...
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEC
T ss_pred EEECCCCCEEEEEEECCCccceEEee
Confidence 46999999999888887777777765
No 24
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=84.97 E-value=21 Score=32.01 Aligned_cols=124 Identities=5% Similarity=-0.082 Sum_probs=71.9
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCC-----CeeeeeeeeEEe
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASC-----NELICKDFFLSM 127 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~-----~e~L~refsLft 127 (424)
.|+|||+++++-+.+...|.+|...... ....+.+..+ +...+-....+.
T Consensus 95 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~s 149 (353)
T 3vgz_A 95 TINNTTQTLWFGNTVNSAVTAIDAKTGE-------------------------VKGRLVLDDRKRTEEVRPLQPRELVAD 149 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCC-------------------------EEEEEESCCCCCCSSCCCCEEEEEEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEeCCCCe-------------------------eEEEEecCCCccccccCCCCCceEEEC
Confidence 5889999888877777788887764111 1111222111 011222345678
Q ss_pred cCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeeec
Q 014429 128 EGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLR 205 (424)
Q Consensus 128 ~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q 205 (424)
.||+++.+++... +-+++++|+++|.+......... +-.|+.+. +..|++.+-
T Consensus 150 ~dg~~l~~~~~~~-------------------~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~- 204 (353)
T 3vgz_A 150 DATNTVYISGIGK-------------------ESVIWVVDGGNIKLKTAIQNTGK-----MSTGLALDSEGKRLYTTNA- 204 (353)
T ss_dssp TTTTEEEEEEESS-------------------SCEEEEEETTTTEEEEEECCCCT-----TCCCCEEETTTTEEEEECT-
T ss_pred CCCCEEEEEecCC-------------------CceEEEEcCCCCceEEEecCCCC-----ccceEEECCCCCEEEEEcC-
Confidence 8999988864221 23588999999988765542211 12244443 344555544
Q ss_pred eeEEEEEEEccCCeEEEeeeeC
Q 014429 206 YQTIHILQVRDLGNLVDVRTIG 227 (424)
Q Consensus 206 ~QtIhi~qI~~~G~fv~vrtIG 227 (424)
...|+++.+. +|+.+..-.+|
T Consensus 205 ~~~i~~~d~~-~~~~~~~~~~~ 225 (353)
T 3vgz_A 205 DGELITIDTA-DNKILSRKKLL 225 (353)
T ss_dssp TSEEEEEETT-TTEEEEEEECC
T ss_pred CCeEEEEECC-CCeEEEEEEcC
Confidence 5678887765 57877766664
No 25
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=84.87 E-value=23 Score=32.34 Aligned_cols=25 Identities=16% Similarity=0.383 Sum_probs=19.5
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEe
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYR 75 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYr 75 (424)
.--.|+|||++|++-+.| ..|.||.
T Consensus 112 ~~~~~s~~~~~l~~~~~d-g~i~i~~ 136 (425)
T 1r5m_A 112 TCLAWSHDGNSIVTGVEN-GELRLWN 136 (425)
T ss_dssp EEEEECTTSSEEEEEETT-SCEEEEE
T ss_pred EEEEEcCCCCEEEEEeCC-CeEEEEe
Confidence 334699999999887776 4688887
No 26
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=84.58 E-value=19 Score=36.72 Aligned_cols=32 Identities=9% Similarity=0.003 Sum_probs=23.0
Q ss_pred eEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCc
Q 014429 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDG 171 (424)
Q Consensus 124 sLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G 171 (424)
.-|..||+++++++... .-...+++++|+.+|
T Consensus 263 ~~~spdg~~l~~~~~~~----------------~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNR----------------AQNECKVNAYDAETG 294 (706)
T ss_dssp EEECTTSSEEEEEEECT----------------TSCEEEEEEEETTTC
T ss_pred EEEECCCCEEEEEEeCC----------------CCCeeEEEEEECCCC
Confidence 45678999988865321 113568999999999
No 27
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=84.33 E-value=7 Score=36.68 Aligned_cols=28 Identities=21% Similarity=0.312 Sum_probs=23.2
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
+..--.|+|||++|++-+. ..|.||...
T Consensus 287 ~v~~~~~s~~g~~l~~~~~--~~v~iwd~~ 314 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDY--LSVKVWDLN 314 (447)
T ss_dssp CEEEEEECTTSSEEEEEES--SEEEEEETT
T ss_pred eEEEEEECCCCCEEEEeeC--CeEEEEeCC
Confidence 4445589999999998775 999999987
No 28
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=84.31 E-value=20 Score=33.67 Aligned_cols=122 Identities=11% Similarity=0.069 Sum_probs=68.3
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecC
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEG 129 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~d 129 (424)
.--.|+|||++|++-+.| ..|.||.... ++ ....+...+.+..+ -...|..|
T Consensus 180 ~~~~~~~~~~~l~~~~~d-~~i~iwd~~~-------~~------------------~~~~~~~~~~~~~~--~~~~~~~~ 231 (402)
T 2aq5_A 180 YSVDWSRDGALICTSCRD-KRVRVIEPRK-------GT------------------VVAEKDRPHEGTRP--VHAVFVSE 231 (402)
T ss_dssp EEEEECTTSSCEEEEETT-SEEEEEETTT-------TE------------------EEEEEECSSCSSSC--CEEEECST
T ss_pred EEEEECCCCCEEEEEecC-CcEEEEeCCC-------Cc------------------eeeeeccCCCCCcc--eEEEEcCC
Confidence 334689999999888766 5688888761 10 01111111222111 13456788
Q ss_pred ceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceE-eeeeeeccceEEeeccceee---ee--cceeeeee
Q 014429 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV-LDEKVFHNDFINLAHNMGVF---LY--DDLLAIVS 203 (424)
Q Consensus 130 gryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v-~D~~~f~~D~I~LsHN~Gv~---Ly--~dlLAILS 203 (424)
|+++++|... -.+-+++++|+.+|.. .-... +.|..++. .. +..|++-+
T Consensus 232 ~~~l~~g~~~------------------~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 232 GKILTTGFSR------------------MSERQVALWDTKHLEEPLSLQE-------LDTSSGVLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp TEEEEEEECT------------------TCCEEEEEEETTBCSSCSEEEE-------CCCCSSCEEEEEETTTTEEEEEE
T ss_pred CcEEEEeccC------------------CCCceEEEEcCccccCCceEEe-------ccCCCceeEEEEcCCCCEEEEEE
Confidence 9988776321 1234688999988753 22221 22333332 12 45666666
Q ss_pred eceeEEEEEEEccCCe--EEEeee
Q 014429 204 LRYQTIHILQVRDLGN--LVDVRT 225 (424)
Q Consensus 204 ~q~QtIhi~qI~~~G~--fv~vrt 225 (424)
-.-.+|+||.+.. |+ +..+..
T Consensus 287 ~~dg~i~i~d~~~-~~~~~~~l~~ 309 (402)
T 2aq5_A 287 KGDSSIRYFEITS-EAPFLHYLSM 309 (402)
T ss_dssp TTCSCEEEEEECS-STTCEEEEEE
T ss_pred cCCCeEEEEEecC-CCcceEeecc
Confidence 6678999999985 44 444443
No 29
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=83.94 E-value=23 Score=32.90 Aligned_cols=29 Identities=14% Similarity=0.246 Sum_probs=23.3
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.+..-.|+|||++|++-|.| ..+.||...
T Consensus 18 ~v~~l~~sp~g~~las~~~D-~~i~iw~~~ 46 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGD-RRIRIWGTE 46 (345)
T ss_dssp CEEEEEECTTSSCEEEEETT-SCEEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCC-CeEEEEEcC
Confidence 45667899999999887766 568999876
No 30
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=83.44 E-value=11 Score=34.83 Aligned_cols=119 Identities=12% Similarity=0.035 Sum_probs=62.6
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecC
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEG 129 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~d 129 (424)
.--.|+|||++|++=+.| ..|.||..+....- . ..|+ ..+.+... +.-|.+|
T Consensus 174 ~~~~~~pdg~~lasg~~d-g~i~iwd~~~~~~~-------------~-~~~~----------~~h~~~v~---~l~fs~~ 225 (343)
T 3lrv_A 174 SSGVLHKDSLLLALYSPD-GILDVYNLSSPDQA-------------S-SRFP----------VDEEAKIK---EVKFADN 225 (343)
T ss_dssp CEEEECTTSCEEEEECTT-SCEEEEESSCTTSC-------------C-EECC----------CCTTSCEE---EEEECTT
T ss_pred EEEEECCCCCEEEEEcCC-CEEEEEECCCCCCC-------------c-cEEe----------ccCCCCEE---EEEEeCC
Confidence 334799999988776655 57999987621100 0 0010 01111111 3446678
Q ss_pred ceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeee-eccceEEeeccceeeee--cceeeeeeece
Q 014429 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKV-FHNDFINLAHNMGVFLY--DDLLAIVSLRY 206 (424)
Q Consensus 130 gryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~-f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~ 206 (424)
|++++.|+ ++ ++.++|+.++....+.. +......+.. ..+..- +..||+-|-.-
T Consensus 226 g~~l~s~~---------------------~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~l~~~s~~d 282 (343)
T 3lrv_A 226 GYWMVVEC---------------------DQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGT-VTYDIDDSGKNMIAYSNES 282 (343)
T ss_dssp SSEEEEEE---------------------SS-BEEEEETTSSTTCBSSCCCBC-----CC-EEEEECTTSSEEEEEETTT
T ss_pred CCEEEEEe---------------------CC-eEEEEEcCCCCcceeecccccccccccc-eEEEECCCCCEEEEecCCC
Confidence 88888764 22 48888988885433211 1111111110 112222 45666656646
Q ss_pred eEEEEEEEccCCe
Q 014429 207 QTIHILQVRDLGN 219 (424)
Q Consensus 207 QtIhi~qI~~~G~ 219 (424)
.+|+||.+...++
T Consensus 283 ~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 283 NSLTIYKFDKKTK 295 (343)
T ss_dssp TEEEEEEECTTTC
T ss_pred CcEEEEEEccccc
Confidence 7899999965443
No 31
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=83.01 E-value=25 Score=31.38 Aligned_cols=51 Identities=8% Similarity=0.009 Sum_probs=34.2
Q ss_pred eeEEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeeceeEEEEEEEccC
Q 014429 160 KITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDL 217 (424)
Q Consensus 160 ~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~QtIhi~qI~~~ 217 (424)
+=++.++|+.+|........+...+.+... .+. .+++-...+|++|.+...
T Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 150 DKTLKFWDTRSSNPMMVLQLPERCYCADVI------YPM-AVVATAERGLIVYQLENQ 200 (368)
T ss_dssp TSEEEEECSSCSSCSEEEECSSCEEEEEEE------TTE-EEEEEGGGCEEEEECSSS
T ss_pred CCcEEEEECCCCcEEEEEecCCCceEEEec------CCe-eEEEeCCCcEEEEEeccc
Confidence 446899999999887777766655544433 333 344555678888888653
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=82.98 E-value=18 Score=32.01 Aligned_cols=116 Identities=14% Similarity=0.059 Sum_probs=63.7
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
-.|+|||++|++-+.| ..+.+|....... .....+......+ -+.-|..+|+
T Consensus 103 ~~~~~~~~~l~~~~~d-~~i~~~d~~~~~~-------------------------~~~~~~~~~~~~i--~~~~~~~~~~ 154 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEA-STLSIWDLAAPTP-------------------------RIKAELTSSAPAC--YALAISPDSK 154 (337)
T ss_dssp EEECTTSSEEEEEESS-SEEEEEECCCC---------------------------EEEEEEECSSSCE--EEEEECTTSS
T ss_pred EEEcCCCCEEEEEcCC-CcEEEEECCCCCc-------------------------ceeeecccCCCce--EEEEECCCCC
Confidence 4799999998887765 5788888762110 0000111111111 1234566888
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeee--ecceeeeeeeceeEE
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFL--YDDLLAIVSLRYQTI 209 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L--y~dlLAILS~q~QtI 209 (424)
++++++... +++++|+.+|...-...-+.+.|. ++.+ -++.|++-+ ..-+|
T Consensus 155 ~l~~~~~dg---------------------~v~~~d~~~~~~~~~~~~~~~~i~-----~~~~~~~~~~l~~~~-~dg~i 207 (337)
T 1gxr_A 155 VCFSCCSDG---------------------NIAVWDLHNQTLVRQFQGHTDGAS-----CIDISNDGTKLWTGG-LDNTV 207 (337)
T ss_dssp EEEEEETTS---------------------CEEEEETTTTEEEEEECCCSSCEE-----EEEECTTSSEEEEEE-TTSEE
T ss_pred EEEEEeCCC---------------------cEEEEeCCCCceeeeeecccCceE-----EEEECCCCCEEEEEe-cCCcE
Confidence 888765321 378899999876655433333221 1222 234555544 45788
Q ss_pred EEEEEccCCeEEEe
Q 014429 210 HILQVRDLGNLVDV 223 (424)
Q Consensus 210 hi~qI~~~G~fv~v 223 (424)
++|.+.. |+.+..
T Consensus 208 ~~~d~~~-~~~~~~ 220 (337)
T 1gxr_A 208 RSWDLRE-GRQLQQ 220 (337)
T ss_dssp EEEETTT-TEEEEE
T ss_pred EEEECCC-CceEee
Confidence 9998874 655443
No 33
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=82.40 E-value=17 Score=33.83 Aligned_cols=25 Identities=20% Similarity=0.296 Sum_probs=19.7
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
=.|+|||++|++-|.|. .+.||...
T Consensus 67 ~~~sp~g~~l~s~s~D~-~v~iw~~~ 91 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDA-TTCIWKKN 91 (345)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEEEC
T ss_pred EEECCCCCEEEEEECCC-cEEEEEcc
Confidence 46999999998888765 57788765
No 34
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.30 E-value=23 Score=30.32 Aligned_cols=26 Identities=15% Similarity=0.200 Sum_probs=19.1
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|+.-+.....+.||.+.
T Consensus 134 ~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred eEECCCCCEEEEEECCCCceEEEEEE
Confidence 37999999988544444568888875
No 35
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=81.50 E-value=21 Score=33.45 Aligned_cols=28 Identities=7% Similarity=0.220 Sum_probs=23.6
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.--.|+|||++|++=|.|.+-+.||...
T Consensus 199 ~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 199 KMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp EEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 3347999999999999988769999876
No 36
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=81.37 E-value=26 Score=35.32 Aligned_cols=81 Identities=9% Similarity=-0.034 Sum_probs=45.0
Q ss_pred eEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccC------ceEeeeee-eccceEEeeccceeeeec
Q 014429 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLED------GVVLDEKV-FHNDFINLAHNMGVFLYD 196 (424)
Q Consensus 124 sLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~------G~v~D~~~-f~~D~I~LsHN~Gv~Ly~ 196 (424)
.-|..||+++++++.... . ..|.-...+++++|+.+ |.+. ..+ -..+.+. .-.++=-+
T Consensus 135 ~~~spDg~~l~~~~~~~~-~----------~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~---~~~~SpDG 199 (662)
T 3azo_A 135 PVLLPERGEVWCMAEEFT-G----------EGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVT---GPRLSPDG 199 (662)
T ss_dssp EEEETTTTEEEEEEEEEC-S----------SSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEEC---CCEECTTS
T ss_pred cEECCCCCEEEEEEeccc-C----------CCCCCceeEEEEEECCCCccccCCcee-EEEecCCCccc---CceECCCC
Confidence 457789999988764321 1 01223457899999998 6531 111 1111110 00111224
Q ss_pred ceeeeeeece-------eEEEEEEEccCCe
Q 014429 197 DLLAIVSLRY-------QTIHILQVRDLGN 219 (424)
Q Consensus 197 dlLAILS~q~-------QtIhi~qI~~~G~ 219 (424)
..||..|-.+ .+|+++.+..+|+
T Consensus 200 ~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 200 RQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp SEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred CEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 5677777654 6899999874573
No 37
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=81.06 E-value=19 Score=32.52 Aligned_cols=24 Identities=8% Similarity=0.203 Sum_probs=20.4
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|+|||++|++-|.| ..+.||...
T Consensus 16 ~~s~~g~~las~s~D-~~v~iw~~~ 39 (297)
T 2pm7_B 16 VMDYYGKRMATCSSD-KTIKIFEVE 39 (297)
T ss_dssp EECTTSSEEEEEETT-SCEEEEEBC
T ss_pred EECCCCCEEEEEeCC-CEEEEEecC
Confidence 599999999988876 569999876
No 38
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=81.03 E-value=36 Score=31.77 Aligned_cols=121 Identities=8% Similarity=-0.029 Sum_probs=68.1
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCceE
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgry 132 (424)
.|+|||++|++-+.....|.+|.... ++ ....+. .++. . ...-|..||++
T Consensus 309 ~~~~~g~~l~~~~~~~~~v~v~d~~~-------~~------------------~~~~~~--~~~~-~--~~~~~s~dg~~ 358 (433)
T 3bws_A 309 VSGNTENKIYVSDMCCSKIEVYDLKE-------KK------------------VQKSIP--VFDK-P--NTIALSPDGKY 358 (433)
T ss_dssp EECSSTTEEEEEETTTTEEEEEETTT-------TE------------------EEEEEE--CSSS-E--EEEEECTTSSE
T ss_pred EECCCCCEEEEEecCCCEEEEEECCC-------Cc------------------EEEEec--CCCC-C--CeEEEcCCCCE
Confidence 68999999888877778888888751 10 011111 1111 1 14567789999
Q ss_pred EEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeeeceeEEE
Q 014429 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTIH 210 (424)
Q Consensus 133 vivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~QtIh 210 (424)
+.+++...-.. ....+ +-.-++=+++++|+.+|.+.....-... + .++.+- +..|++-+-...+|+
T Consensus 359 l~~~~~~~~~~----~~~~~--~~g~~dg~v~~~d~~~~~~~~~~~~~~~-~-----~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 359 LYVSCRGPNHP----TEGYL--KKGLVLGKVYVIDTTTDTVKEFWEAGNQ-P-----TGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp EEEEECCCCCT----TTCTT--SCCSSCCEEEEEETTTTEEEEEEECSSS-E-----EEEEECTTSCEEEEEETTTTEEE
T ss_pred EEEEecCCCcc----ccccc--cccccceEEEEEECCCCcEEEEecCCCC-C-----ceEEEcCCCCEEEEEECCCCeEE
Confidence 98875432110 00000 0012445799999999987765433211 1 123222 345555555567888
Q ss_pred EEEEc
Q 014429 211 ILQVR 215 (424)
Q Consensus 211 i~qI~ 215 (424)
||.+.
T Consensus 427 v~~~~ 431 (433)
T 3bws_A 427 VYRRD 431 (433)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 88775
No 39
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.92 E-value=14 Score=38.07 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=34.5
Q ss_pred ceeEEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeee----ceeEEEEEEE
Q 014429 159 EKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSL----RYQTIHILQV 214 (424)
Q Consensus 159 e~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~----q~QtIhi~qI 214 (424)
.+=++.++|+++|.+..+...+...+.++.+ +..||+.|. -...+++++.
T Consensus 449 ~d~~v~~~d~~~~~~~~~~~~~~~~v~~s~d------g~~la~~~~~~~~~~~~~~~~~~ 502 (814)
T 3mkq_A 449 SDGFVYFFDWDNGTLVRRIDVNAKDVIWSDN------GELVMIVNTNSNGDEASGYTLLF 502 (814)
T ss_dssp ETTEEEEECTTTCCEEEEESSCEEEEEECTT------SSEEEEEECCCSSCSCSEEEEEE
T ss_pred cCCEEEEEECCcCcEEEEEecCCCEEEEcCC------CCEEEEEEcCcccCCceEEEEEe
Confidence 3458999999999988777766666666654 367777743 2345666654
No 40
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=80.83 E-value=22 Score=32.65 Aligned_cols=37 Identities=3% Similarity=-0.131 Sum_probs=25.7
Q ss_pred EEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccc
Q 014429 125 LSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHND 182 (424)
Q Consensus 125 Lft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D 182 (424)
.|..||+++++++.. -+++++|+++|....-..++..
T Consensus 87 ~~spdg~~l~~~~~~---------------------~~l~~~d~~~g~~~~~~~~~~~ 123 (388)
T 3pe7_A 87 FLSPDDDALFYVKDG---------------------RNLMRVDLATLEENVVYQVPAE 123 (388)
T ss_dssp EECTTSSEEEEEETT---------------------TEEEEEETTTCCEEEEEECCTT
T ss_pred EEcCCCCEEEEEeCC---------------------CeEEEEECCCCcceeeeechhh
Confidence 478899998887521 2688999999976544444444
No 41
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=80.53 E-value=21 Score=33.41 Aligned_cols=47 Identities=9% Similarity=0.147 Sum_probs=30.6
Q ss_pred EEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeeceeEEEEEEEcc
Q 014429 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRD 216 (424)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~QtIhi~qI~~ 216 (424)
++.|+|+.+|...-+..+..... +|.+..+.+++.+ -.+|+||.+..
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~~v~------~v~~~~~~~~~~~--~~~i~i~d~~~ 128 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKVDAPVK------DLFLSREFIVVSY--GDVISVFKFGN 128 (355)
T ss_dssp EEEEEETTTTEEEEEEECSSCEE------EEEECSSEEEEEE--TTEEEEEESST
T ss_pred EEEEEECCCCcEEEEEECCCceE------EEEEcCCEEEEEE--cCEEEEEECCC
Confidence 78899999998877766555332 3344455555543 45788888764
No 42
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=80.40 E-value=12 Score=37.88 Aligned_cols=35 Identities=11% Similarity=0.020 Sum_probs=24.0
Q ss_pred EEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEcc-Cce
Q 014429 125 LSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLE-DGV 172 (424)
Q Consensus 125 Lft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~-~G~ 172 (424)
-|..||+++.+++.... .-+....+++++|+. +|.
T Consensus 194 ~~SpDG~~la~~~~~~~-------------~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 194 RLSPDGRQAVWLAWDHP-------------RMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp EECTTSSEEEEEEECTT-------------CCTTTCEEEEEEEECTTSC
T ss_pred eECCCCCEEEEEECCCC-------------CCCCCCcEEEEEEECCCCc
Confidence 36789999988764321 112345789999999 683
No 43
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=80.23 E-value=13 Score=33.75 Aligned_cols=108 Identities=6% Similarity=0.082 Sum_probs=63.1
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
-.|+|||++|++=|.| ..+.||.... +.+ ...+... . ..+ -+.-|..||+
T Consensus 19 ~~fsp~~~~l~s~~~d-g~v~lWd~~~-------~~~------------------~~~~~~~-~-~~v--~~~~~~~~~~ 68 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYS-GRVELWNYET-------QVE------------------VRSIQVT-E-TPV--RAGKFIARKN 68 (304)
T ss_dssp EEECSSSSEEEEEETT-SEEEEEETTT-------TEE------------------EEEEECC-S-SCE--EEEEEEGGGT
T ss_pred EEECCCCCEEEEEcCC-CcEEEEECCC-------Cce------------------eEEeecc-C-CcE--EEEEEeCCCC
Confidence 3699999999988866 5789998751 100 0111111 1 111 1345678899
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeeeceeEE
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTI 209 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~QtI 209 (424)
+++.|+. |-++.++|+++|...-...-+.+.|. .|.+. +.+||. +-.-.+|
T Consensus 69 ~l~s~s~---------------------d~~i~vwd~~~~~~~~~~~~h~~~v~-----~~~~~~~~~~l~s-gs~D~~v 121 (304)
T 2ynn_A 69 WIIVGSD---------------------DFRIRVFNYNTGEKVVDFEAHPDYIR-----SIAVHPTKPYVLS-GSDDLTV 121 (304)
T ss_dssp EEEEEET---------------------TSEEEEEETTTCCEEEEEECCSSCEE-----EEEECSSSSEEEE-EETTSCE
T ss_pred EEEEECC---------------------CCEEEEEECCCCcEEEEEeCCCCcEE-----EEEEcCCCCEEEE-ECCCCeE
Confidence 8887643 23688999999987655444444332 11121 234443 3345788
Q ss_pred EEEEEcc
Q 014429 210 HILQVRD 216 (424)
Q Consensus 210 hi~qI~~ 216 (424)
.|+.+..
T Consensus 122 ~lWd~~~ 128 (304)
T 2ynn_A 122 KLWNWEN 128 (304)
T ss_dssp EEEEGGG
T ss_pred EEEECCC
Confidence 8888764
No 44
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=80.13 E-value=32 Score=35.80 Aligned_cols=32 Identities=13% Similarity=0.304 Sum_probs=20.9
Q ss_pred cceeeeeeeceeEEEEEEEccCCeEEEeeee-CC
Q 014429 196 DDLLAIVSLRYQTIHILQVRDLGNLVDVRTI-GS 228 (424)
Q Consensus 196 ~dlLAILS~q~QtIhi~qI~~~G~fv~vrtI-G~ 228 (424)
+..|.|-+...-+|.++... +|+++..-.+ |.
T Consensus 353 gr~~~va~~~sn~V~ViD~~-t~kl~~~i~vgg~ 385 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTK-EGKLVAIEDTGGQ 385 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETT-TTEEEEEEECSSS
T ss_pred CCEEEEEeCCCCeEEEEECC-CCcEEEEEeccCc
Confidence 44555666666778886665 5887766666 43
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=79.19 E-value=37 Score=31.99 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=26.7
Q ss_pred eeecCCCceeeeeCCCCCeEEEeeCCCc------eEEEEeecCC
Q 014429 42 YDIECPDHSFRKFTDDGQYLISFSRNHQ------DLIVYRPMWL 79 (424)
Q Consensus 42 ~~Ve~P~~~lRKFTpDG~yLIaFS~dq~------sL~vYry~g~ 79 (424)
++|.-| .|=-.|+|||+.|++=+-|.. .|.+|+....
T Consensus 11 ~~~g~P-V~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~ 53 (365)
T 4h5i_A 11 YNVGYP-AYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPT 53 (365)
T ss_dssp EECSSC-EEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTT
T ss_pred cCCCCC-EEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCC
Confidence 455555 455589999999999776554 5899987643
No 46
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=79.08 E-value=35 Score=30.43 Aligned_cols=28 Identities=21% Similarity=0.408 Sum_probs=21.1
Q ss_pred ceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 49 HSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 49 ~~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
..--+|+|||++|++-+.|. .|.||...
T Consensus 35 v~~~~~s~~~~~l~~~~~dg-~i~vwd~~ 62 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKDS-SASVWYSL 62 (369)
T ss_dssp EEEEEECTTSCEEEEEESSS-CEEEEETT
T ss_pred EEEEEEcCCCCEEEEEeCCC-EEEEEeCC
Confidence 33447999999998877664 68888764
No 47
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=78.85 E-value=17 Score=34.91 Aligned_cols=28 Identities=21% Similarity=0.324 Sum_probs=23.4
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.--.|+|||++|+|-+.....+.||...
T Consensus 106 ~~~~~s~d~~~l~~~~~~dg~v~iwd~~ 133 (450)
T 2vdu_B 106 RNLRLTSDESRLIACADSDKSLLVFDVD 133 (450)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEECc
Confidence 3447999999998888777889999986
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=78.67 E-value=27 Score=31.97 Aligned_cols=28 Identities=18% Similarity=0.246 Sum_probs=21.6
Q ss_pred eeeeeCCCCCeEEEeeCCC--ceEEEEeec
Q 014429 50 SFRKFTDDGQYLISFSRNH--QDLIVYRPM 77 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq--~sL~vYry~ 77 (424)
.--.|+|||++|++-+.|. ..|.||...
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETT
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 3347899999998888663 678888876
No 49
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=77.93 E-value=9.3 Score=36.00 Aligned_cols=17 Identities=24% Similarity=0.452 Sum_probs=14.9
Q ss_pred eeCCCCCeEEEeeCCCc
Q 014429 53 KFTDDGQYLISFSRNHQ 69 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~ 69 (424)
+|||||++|++=|.|..
T Consensus 49 ~fSpDG~~las~s~d~~ 65 (357)
T 4g56_B 49 RYRRDGALLLAASSLSS 65 (357)
T ss_dssp EECSSSCEEEEEECSSS
T ss_pred EECCCCCEEEEEcCCCC
Confidence 79999999999998753
No 50
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=77.58 E-value=31 Score=35.17 Aligned_cols=28 Identities=11% Similarity=0.115 Sum_probs=21.4
Q ss_pred ceeeeeCC----CCCeEEEeeCCCceEEEEeec
Q 014429 49 HSFRKFTD----DGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 49 ~~lRKFTp----DG~yLIaFS~dq~sL~vYry~ 77 (424)
+.+ -||| ||++|.+-+....++.|+...
T Consensus 225 ~~v-a~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 225 RSV-ESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp EEE-EECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred ceE-EeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 344 3999 999998888767788888753
No 51
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=77.53 E-value=28 Score=38.03 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=47.8
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCc
Q 014429 51 FRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGN 130 (424)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dg 130 (424)
--.|||||++|++-|.|. .|.||.... ++ ...++. .+.+... +.-|..||
T Consensus 620 ~~~~s~~~~~l~s~~~d~-~i~vw~~~~-------~~------------------~~~~~~-~h~~~v~---~~~~s~~~ 669 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGADK-TLQVFKAET-------GE------------------KLLDIK-AHEDEVL---CCAFSSDD 669 (1249)
T ss_dssp EEEECTTSSEEEEEETTS-CEEEEETTT-------CC------------------EEEEEC-CCSSCEE---EEEECTTS
T ss_pred EEEECCCCCEEEEEeCCC-eEEEEECCC-------CC------------------EEEEec-cCCCCEE---EEEEecCC
Confidence 347999999998887665 688988751 10 011111 1222222 34567889
Q ss_pred eEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeee
Q 014429 131 QFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKV 178 (424)
Q Consensus 131 ryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~ 178 (424)
++++.|+.. -++.++|+.+|...-+..
T Consensus 670 ~~l~s~~~d---------------------~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 670 SYIATCSAD---------------------KKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp SEEEEEETT---------------------SEEEEEETTTCCEEEEEE
T ss_pred CEEEEEeCC---------------------CeEEEEECCCCceEEEEc
Confidence 988876421 258899999997665543
No 52
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=77.52 E-value=37 Score=29.95 Aligned_cols=129 Identities=12% Similarity=-0.012 Sum_probs=69.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCee-eeeeeeEEecCce
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNEL-ICKDFFLSMEGNQ 131 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~-L~refsLft~dgr 131 (424)
.|||||++|++-+.+...|.+|...... ....+.+...+++ -.=...-+..||+
T Consensus 40 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~s~dg~ 94 (337)
T 1pby_B 40 MVAPGGRIAYATVNKSESLVKIDLVTGE-------------------------TLGRIDLSTPEERVKSLFGAALSPDGK 94 (337)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTCC-------------------------EEEEEECCBTTEEEECTTCEEECTTSS
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCCCC-------------------------eEeeEEcCCcccccccccceEECCCCC
Confidence 5999999987777777788888764100 1111111110000 0001345678999
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCC-c--ceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeeece
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPF-I--EKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRY 206 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~-l--e~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~ 206 (424)
++.+++...-.. |. . .+-++.++|+.+|.+......... -.++.+- +..|++. .
T Consensus 95 ~l~~~~~~~~~~------------~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~---~ 153 (337)
T 1pby_B 95 TLAIYESPVRLE------------LTHFEVQPTRVALYDAETLSRRKAFEAPRQ------ITMLAWARDGSKLYGL---G 153 (337)
T ss_dssp EEEEEEEEEEEC------------SSCEEECCCEEEEEETTTTEEEEEEECCSS------CCCEEECTTSSCEEEE---S
T ss_pred EEEEEecccccc------------cccccccCceEEEEECCCCcEEEEEeCCCC------cceeEECCCCCEEEEe---C
Confidence 988875332111 11 1 245689999999987755433211 1123222 3334444 3
Q ss_pred eEEEEEEEccCCeEEEeeeeCC
Q 014429 207 QTIHILQVRDLGNLVDVRTIGS 228 (424)
Q Consensus 207 QtIhi~qI~~~G~fv~vrtIG~ 228 (424)
..|+++.+. +|+.+..-..|.
T Consensus 154 ~~i~~~d~~-~~~~~~~~~~~~ 174 (337)
T 1pby_B 154 RDLHVMDPE-AGTLVEDKPIQS 174 (337)
T ss_dssp SSEEEEETT-TTEEEEEECSTT
T ss_pred CeEEEEECC-CCcEeeeeeccc
Confidence 678888876 477665444443
No 53
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=77.36 E-value=21 Score=32.09 Aligned_cols=25 Identities=12% Similarity=0.208 Sum_probs=20.3
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
=.|+|||++|++-+.| ..|.||...
T Consensus 17 ~~~s~~~~~l~~~~~d-g~i~iw~~~ 41 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSD-KTIKIFEVE 41 (379)
T ss_dssp EEECSSSSEEEEEETT-SCEEEEEEE
T ss_pred EEEcCCCCEEEEEECC-CcEEEEecC
Confidence 3699999998877765 569999886
No 54
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=76.88 E-value=37 Score=30.13 Aligned_cols=24 Identities=13% Similarity=0.202 Sum_probs=19.1
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|+|||++|++=|.|. .+.||...
T Consensus 222 ~~s~~~~~l~s~s~Dg-~i~iwd~~ 245 (340)
T 4aow_A 222 TVSPDGSLCASGGKDG-QAMLWDLN 245 (340)
T ss_dssp EECTTSSEEEEEETTC-EEEEEETT
T ss_pred EECCCCCEEEEEeCCC-eEEEEEec
Confidence 5899999998887764 67888765
No 55
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=76.75 E-value=26 Score=38.21 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=13.4
Q ss_pred eeeeeCCCCCeEEEeeCC
Q 014429 50 SFRKFTDDGQYLISFSRN 67 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~d 67 (424)
.--.|||||++|+.-|.+
T Consensus 56 ~~~~~SPDG~~la~~s~~ 73 (1045)
T 1k32_A 56 NNARFFPDGRKIAIRVMR 73 (1045)
T ss_dssp EEEEECTTSSEEEEEEEE
T ss_pred cCeEECCCCCEEEEEEee
Confidence 445799999987766654
No 56
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=76.64 E-value=50 Score=30.97 Aligned_cols=128 Identities=13% Similarity=0.063 Sum_probs=69.6
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCC--CCeeeeeeeeEEecC
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLAS--CNELICKDFFLSMEG 129 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~--~~e~L~refsLft~d 129 (424)
-.|+|||++|++-|.| ..|.||+.... .. +.+ .+ .+. ......+.+.+ .++.+..=..++.+|
T Consensus 117 ~~~~~~~~~l~s~s~d-g~i~vwd~~~~---~~-~~~------~~--~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 181 (437)
T 3gre_A 117 ITMIPNFDAFAVSSKD-GQIIVLKVNHY---QQ-ESE------VK--FLN--CECIRKINLKNFGKNEYAVRMRAFVNEE 181 (437)
T ss_dssp EEECTTSSEEEEEETT-SEEEEEEEEEE---EE-TTE------EE--EEE--EEEEEEEEGGGGSSCCCEEEEEEEECSS
T ss_pred EEEeCCCCEEEEEeCC-CEEEEEEeccc---cC-Cce------ee--ccc--cceeEEEEccCcccccCceEEEEEEcCC
Confidence 4699999999988876 57889887310 00 100 00 000 00223344433 333333333446778
Q ss_pred ceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeee--ccceEEeeccceeee--ecceeeeeeec
Q 014429 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVF--HNDFINLAHNMGVFL--YDDLLAIVSLR 205 (424)
Q Consensus 130 gryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f--~~D~I~LsHN~Gv~L--y~dlLAILS~q 205 (424)
|.+++.|+... ++.++|+.+|...-+..- +.+.|. .+.+ -+++||.-|-
T Consensus 182 ~~~l~~~~~d~---------------------~i~iwd~~~~~~~~~~~~~~h~~~v~-----~~~~s~~~~~l~s~~~- 234 (437)
T 3gre_A 182 KSLLVALTNLS---------------------RVIIFDIRTLERLQIIENSPRHGAVS-----SICIDEECCVLILGTT- 234 (437)
T ss_dssp CEEEEEEETTS---------------------EEEEEETTTCCEEEEEECCGGGCCEE-----EEEECTTSCEEEEEET-
T ss_pred CCEEEEEeCCC---------------------eEEEEeCCCCeeeEEEccCCCCCceE-----EEEECCCCCEEEEEcC-
Confidence 88888775422 588999999987655443 222221 1111 1344554443
Q ss_pred eeEEEEEEEccCCeEEE
Q 014429 206 YQTIHILQVRDLGNLVD 222 (424)
Q Consensus 206 ~QtIhi~qI~~~G~fv~ 222 (424)
--+|.|+.+.. |+.+.
T Consensus 235 dg~i~iwd~~~-~~~~~ 250 (437)
T 3gre_A 235 RGIIDIWDIRF-NVLIR 250 (437)
T ss_dssp TSCEEEEETTT-TEEEE
T ss_pred CCeEEEEEcCC-ccEEE
Confidence 36788888764 65554
No 57
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=76.48 E-value=57 Score=31.52 Aligned_cols=61 Identities=15% Similarity=0.073 Sum_probs=42.7
Q ss_pred EEEEEEccCceEeeeeeeccceEEeeccceeeeecc---eeeeeeeceeEEEEEEEccCCeEEEe-eeeCCc
Q 014429 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDD---LLAIVSLRYQTIHILQVRDLGNLVDV-RTIGSF 229 (424)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~d---lLAILS~q~QtIhi~qI~~~G~fv~v-rtIG~f 229 (424)
++.+||++++++..+..... .-.|+.+-.| +|.+..-..-+|.|+... +|+.+.. -.+|+.
T Consensus 299 ~V~VID~~t~~vv~~i~~g~------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~-t~~vv~~i~~vG~~ 363 (373)
T 2mad_H 299 EVTSVTGLVGQTSSQISLGH------DVDAISVAQDGGPDLYALSAGTEVLHIYDAG-AGDQDQSTVELGSG 363 (373)
T ss_pred eEEEEECCCCEEEEEEECCC------CcCeEEECCCCCeEEEEEcCCCCeEEEEECC-CCCEEeeecCCCCC
Confidence 68999999999988775543 2345655544 566655556889998876 5788766 567763
No 58
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=76.19 E-value=8.5 Score=40.16 Aligned_cols=103 Identities=11% Similarity=0.118 Sum_probs=57.3
Q ss_pred eeC----CCCCeEEEeeCCCceEEEEeecCCCCCcC----cccc--cC---CCCCccccchhhhhheeeEEEcCCCCeee
Q 014429 53 KFT----DDGQYLISFSRNHQDLIVYRPMWLSFSCK----EEDC--CR---HDLPPKAKRFESFFTQLYSVTLASCNELI 119 (424)
Q Consensus 53 KFT----pDG~yLIaFS~dq~sL~vYry~g~~~~~~----~~e~--~~---~~~~~r~~~F~~fF~~~~~~~la~~~e~L 119 (424)
-|| |||++++..+-...++.|+.-. +...- .+.. ++ +..+.-+.+..+-....+.+++...|+..
T Consensus 246 a~s~~~~pDGk~l~v~n~~~~~v~ViD~~--t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYWPPQYVIMDGE--TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEETT--TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred EEccccCCCCCEEEEEEccCCeEEEEECC--CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 488 7999999999888899998732 21100 0000 00 01111112222223344555554444322
Q ss_pred eee-------------------eeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeee
Q 014429 120 CKD-------------------FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEK 177 (424)
Q Consensus 120 ~re-------------------fsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~ 177 (424)
-=| ...|+.||||+++|+.. +=++.+||+++|.+....
T Consensus 324 ~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~--------------------sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 324 LVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA--------------------RNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp EEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG--------------------GTEEEEEETTTTEEEEEE
T ss_pred EEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC--------------------CCeEEEEECCCCcEEEEE
Confidence 111 23588899999997422 113778999999887654
No 59
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=75.12 E-value=12 Score=39.23 Aligned_cols=25 Identities=12% Similarity=0.187 Sum_probs=21.3
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|||||++|+..|.|...+.+|.+.
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~ 201 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYS 201 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEE
T ss_pred EECCCCCEEEEEEEcccCCceEEEE
Confidence 5999999999888888888877765
No 60
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=74.68 E-value=58 Score=30.70 Aligned_cols=114 Identities=11% Similarity=0.092 Sum_probs=60.9
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
-.|+|||++|++=|.| ..|.||.... ++. ..++ -.+.+... +.-|..+|+
T Consensus 129 v~~s~dg~~l~s~~~d-~~i~iwd~~~-------~~~------------------~~~~-~~h~~~v~---~~~~~p~~~ 178 (393)
T 1erj_A 129 VCFSPDGKFLATGAED-RLIRIWDIEN-------RKI------------------VMIL-QGHEQDIY---SLDYFPSGD 178 (393)
T ss_dssp EEECTTSSEEEEEETT-SCEEEEETTT-------TEE------------------EEEE-CCCSSCEE---EEEECTTSS
T ss_pred EEECCCCCEEEEEcCC-CeEEEEECCC-------CcE------------------EEEE-ccCCCCEE---EEEEcCCCC
Confidence 3699999998876655 5788887651 100 0000 01111111 334567888
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeeceeEEEE
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHI 211 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~QtIhi 211 (424)
+++.|+. |-++.++|+.+|...-..........++-+. --+.+||.-| .-.+|.|
T Consensus 179 ~l~s~s~---------------------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~s-~d~~v~i 233 (393)
T 1erj_A 179 KLVSGSG---------------------DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP---GDGKYIAAGS-LDRAVRV 233 (393)
T ss_dssp EEEEEET---------------------TSEEEEEETTTTEEEEEEECSSCEEEEEECS---TTCCEEEEEE-TTSCEEE
T ss_pred EEEEecC---------------------CCcEEEEECCCCeeEEEEEcCCCcEEEEEEC---CCCCEEEEEc-CCCcEEE
Confidence 8766542 2368899999997654443332222211100 0133455444 3467888
Q ss_pred EEEccCCeEE
Q 014429 212 LQVRDLGNLV 221 (424)
Q Consensus 212 ~qI~~~G~fv 221 (424)
+.+. .|+.+
T Consensus 234 wd~~-~~~~~ 242 (393)
T 1erj_A 234 WDSE-TGFLV 242 (393)
T ss_dssp EETT-TCCEE
T ss_pred EECC-CCcEE
Confidence 8876 36554
No 61
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=74.50 E-value=23 Score=31.65 Aligned_cols=28 Identities=7% Similarity=0.007 Sum_probs=22.6
Q ss_pred eeeeeCCCCCeEEEeeCC---CceEEEEeec
Q 014429 50 SFRKFTDDGQYLISFSRN---HQDLIVYRPM 77 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~d---q~sL~vYry~ 77 (424)
.=-+|+|||.+|++.+.. ...|.||...
T Consensus 22 ~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~ 52 (357)
T 3i2n_A 22 FDCKWVPCSAKFVTMGNFARGTGVIQLYEIQ 52 (357)
T ss_dssp EEEEECTTSSEEEEEEC--CCCEEEEEEEEC
T ss_pred EEEEEcCCCceEEEecCccCCCcEEEEEeCC
Confidence 334799999999988876 7899999887
No 62
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=74.28 E-value=55 Score=30.82 Aligned_cols=25 Identities=28% Similarity=0.352 Sum_probs=19.7
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++=|.| ..+.||...
T Consensus 262 v~~~~~g~~l~s~s~d-~~v~~wd~~ 286 (393)
T 1erj_A 262 VVFTRDGQSVVSGSLD-RSVKLWNLQ 286 (393)
T ss_dssp EEECTTSSEEEEEETT-SEEEEEEC-
T ss_pred EEECCCCCEEEEEeCC-CEEEEEECC
Confidence 3699999999887765 569999886
No 63
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=72.95 E-value=11 Score=34.64 Aligned_cols=14 Identities=7% Similarity=-0.016 Sum_probs=11.5
Q ss_pred eeEEEEEEccCceE
Q 014429 160 KITFHLLRLEDGVV 173 (424)
Q Consensus 160 ~ytfhlVdL~~G~v 173 (424)
+..++++|+.+|.+
T Consensus 319 ~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 319 DPFLYVLNTKAKSA 332 (396)
T ss_dssp CCEEEEEETTTTBC
T ss_pred CCcEEEEecccCce
Confidence 45799999999974
No 64
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=72.22 E-value=39 Score=30.17 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=20.5
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.--.|+|||++|++-|.|. .|.||...
T Consensus 153 ~~~~~~~~~~~l~~~~~d~-~i~~wd~~ 179 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSYDG-LCRIWDTA 179 (312)
T ss_dssp EEEEECTTSSEEEEEETTS-CEEEEETT
T ss_pred EEEEEcCCCCEEEEEeCCC-cEEEEECC
Confidence 3346899999988877765 68888765
No 65
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=72.19 E-value=65 Score=30.20 Aligned_cols=122 Identities=11% Similarity=0.062 Sum_probs=65.8
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
=.|+|||++|++-+.| ..|.||...... + .+. +......+ -+.-|..+|.
T Consensus 223 ~~~~~~~~~l~s~~~d-~~v~iwd~~~~~-------------~------------~~~--~~~~~~~v--~~~~~~p~~~ 272 (401)
T 4aez_A 223 LAWRSDGLQLASGGND-NVVQIWDARSSI-------------P------------KFT--KTNHNAAV--KAVAWCPWQS 272 (401)
T ss_dssp EEECTTSSEEEEEETT-SCEEEEETTCSS-------------E------------EEE--ECCCSSCC--CEEEECTTST
T ss_pred EEEcCCCCEEEEEeCC-CeEEEccCCCCC-------------c------------cEE--ecCCcceE--EEEEECCCCC
Confidence 4699999998887766 478888776200 0 000 00111111 1233455666
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeee-eeceeEEE
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIV-SLRYQTIH 210 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAIL-S~q~QtIh 210 (424)
++++.++.. .+=+++++|+.+|...-..........++-+ --+..|++. +-..-+|+
T Consensus 273 ~ll~~~~gs------------------~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~g~~dg~i~ 330 (401)
T 4aez_A 273 NLLATGGGT------------------MDKQIHFWNAATGARVNTVDAGSQVTSLIWS----PHSKEIMSTHGFPDNNLS 330 (401)
T ss_dssp TEEEEECCT------------------TTCEEEEEETTTCCEEEEEECSSCEEEEEEC----SSSSEEEEEECTTTCEEE
T ss_pred CEEEEecCC------------------CCCEEEEEECCCCCEEEEEeCCCcEEEEEEC----CCCCeEEEEeecCCCcEE
Confidence 666643211 1335899999999876655433322222210 123344444 23567899
Q ss_pred EEEEccCCeEEEeeee
Q 014429 211 ILQVRDLGNLVDVRTI 226 (424)
Q Consensus 211 i~qI~~~G~fv~vrtI 226 (424)
||.+.. |....+..+
T Consensus 331 v~~~~~-~~~~~~~~~ 345 (401)
T 4aez_A 331 IWSYSS-SGLTKQVDI 345 (401)
T ss_dssp EEEEET-TEEEEEEEE
T ss_pred EEecCC-ccceeEEEe
Confidence 999874 666666544
No 66
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=71.56 E-value=41 Score=31.67 Aligned_cols=53 Identities=19% Similarity=0.146 Sum_probs=28.0
Q ss_pred eEEEEEEccCceEeeeeeeccceEEeeccceeeee--c-ceeeeeeeceeEEEEEEEccCCeE
Q 014429 161 ITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--D-DLLAIVSLRYQTIHILQVRDLGNL 220 (424)
Q Consensus 161 ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~-dlLAILS~q~QtIhi~qI~~~G~f 220 (424)
=++.|+|+++|...-...=+.+.|. .+... + .+||--| .-.+|.|+.+.. |+.
T Consensus 149 ~~i~iwd~~~~~~~~~~~~h~~~V~-----~~~~~~~~~~~l~s~s-~D~~v~iwd~~~-~~~ 204 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSSYRAHAAQVT-----CVAASPHKDSVFLSCS-EDNRILLWDTRC-PKP 204 (344)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEE-----EEEECSSCTTEEEEEE-TTSCEEEEETTS-SSC
T ss_pred CeEEEEECCCCcEEEEEcCcCCceE-----EEEecCCCCCceeeec-cccccccccccc-cce
Confidence 3589999999988755433333221 11111 1 1333333 336788887763 443
No 67
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=70.35 E-value=19 Score=34.82 Aligned_cols=33 Identities=6% Similarity=0.040 Sum_probs=22.9
Q ss_pred eeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceE
Q 014429 123 FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV 173 (424)
Q Consensus 123 fsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v 173 (424)
..-|..||+++++++... ...+++++|+.+|.+
T Consensus 358 ~~~~spdg~~l~~~s~~~------------------~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 358 TPSLAPNGTMVIYSSSQG------------------MGSVLNLVSTDGRFK 390 (415)
T ss_dssp EEEECTTSSEEEEEEEET------------------TEEEEEEEETTSCCE
T ss_pred CeEEcCCCCEEEEEEcCC------------------CccEEEEEECCCCcE
Confidence 456788999998876422 134799999986543
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=70.33 E-value=61 Score=29.93 Aligned_cols=26 Identities=31% Similarity=0.347 Sum_probs=20.1
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
--.|+|||++|++-|.|. .|.||...
T Consensus 144 ~~~~~~~~~~l~s~s~d~-~i~iwd~~ 169 (420)
T 3vl1_A 144 KLKFFPSGEALISSSQDM-QLKIWSVK 169 (420)
T ss_dssp EEEECTTSSEEEEEETTS-EEEEEETT
T ss_pred EEEECCCCCEEEEEeCCC-eEEEEeCC
Confidence 347999999888777664 68888775
No 69
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=70.08 E-value=22 Score=32.83 Aligned_cols=25 Identities=24% Similarity=0.382 Sum_probs=20.0
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++-|.| ..|.||...
T Consensus 212 l~~spd~~~l~s~s~d-g~i~iwd~~ 236 (321)
T 3ow8_A 212 LTFSPDSQLLVTASDD-GYIKIYDVQ 236 (321)
T ss_dssp EEECTTSCEEEEECTT-SCEEEEETT
T ss_pred EEEcCCCCEEEEEcCC-CeEEEEECC
Confidence 4799999998887766 458888876
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=70.04 E-value=35 Score=31.86 Aligned_cols=26 Identities=8% Similarity=0.096 Sum_probs=21.0
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.-=.|+|||++|++ + +...|.||...
T Consensus 181 ~~~~~~~~~~~l~s-~-~d~~i~iwd~~ 206 (447)
T 3dw8_B 181 NSISINSDYETYLS-A-DDLRINLWHLE 206 (447)
T ss_dssp CEEEECTTSSEEEE-E-CSSEEEEEETT
T ss_pred EEEEEcCCCCEEEE-e-CCCeEEEEECC
Confidence 33469999999887 5 68889999876
No 71
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=69.93 E-value=60 Score=28.86 Aligned_cols=55 Identities=9% Similarity=0.113 Sum_probs=33.8
Q ss_pred EEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeeeceeEEEEEEEccCCeEEEee
Q 014429 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTIHILQVRDLGNLVDVR 224 (424)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~QtIhi~qI~~~G~fv~vr 224 (424)
+++++|+++|.+.......... .++.+- ++.|++ +-...+|.++.+. +|+.+..-
T Consensus 276 ~v~~~d~~~~~~~~~~~~~~~~------~~~~~s~dg~~l~~-~~~~~~v~v~d~~-~~~~~~~~ 332 (349)
T 1jmx_B 276 RLAKYDLKQRKLIKAANLDHTY------YCVAFDKKGDKLYL-GGTFNDLAVFNPD-TLEKVKNI 332 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCC------CEEEECSSSSCEEE-ESBSSEEEEEETT-TTEEEEEE
T ss_pred eEEEEECccCeEEEEEcCCCCc------cceEECCCCCEEEE-ecCCCeEEEEecc-ccceeeee
Confidence 6899999999887665433221 234333 335555 3344789999876 46655443
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=69.77 E-value=75 Score=34.69 Aligned_cols=25 Identities=16% Similarity=0.442 Sum_probs=20.4
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++-|.|. .|.||...
T Consensus 663 ~~~s~~~~~l~s~~~d~-~v~vwd~~ 687 (1249)
T 3sfz_A 663 CAFSSDDSYIATCSADK-KVKIWDSA 687 (1249)
T ss_dssp EEECTTSSEEEEEETTS-EEEEEETT
T ss_pred EEEecCCCEEEEEeCCC-eEEEEECC
Confidence 47999999999888764 58888875
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=69.70 E-value=51 Score=32.05 Aligned_cols=120 Identities=11% Similarity=-0.038 Sum_probs=64.6
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCC-CeeeeeeeeEEec
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASC-NELICKDFFLSME 128 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~-~e~L~refsLft~ 128 (424)
.--.|+|||+++++.......+.||.... +.. ..++.-..+ +..+ -+.-|..
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-------~~~------------------~~~~~~~~~~~~~v--~~~~~~~ 216 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQGPP-------FKF------------------SASDRTHHKQGSFV--RDVEFSP 216 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTT-------BEE------------------EEEECSSSCTTCCE--EEEEECS
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeCCC-------cce------------------eeeecccCCCCceE--EEEEECC
Confidence 33479999997666666778899987541 100 011110000 0011 1345667
Q ss_pred C-ceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeee-e---eccceEEeeccceeee-ecceeeee
Q 014429 129 G-NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEK-V---FHNDFINLAHNMGVFL-YDDLLAIV 202 (424)
Q Consensus 129 d-gryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~-~---f~~D~I~LsHN~Gv~L-y~dlLAIL 202 (424)
+ |++++.|+... ++.++|+.+|....+. . -+.+.|. ++.. -++.|+.-
T Consensus 217 ~~~~~l~~~~~dg---------------------~i~vwd~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~l~~~ 270 (615)
T 1pgu_A 217 DSGEFVITVGSDR---------------------KISCFDGKSGEFLKYIEDDQEPVQGGIF-----ALSWLDSQKFATV 270 (615)
T ss_dssp TTCCEEEEEETTC---------------------CEEEEETTTCCEEEECCBTTBCCCSCEE-----EEEESSSSEEEEE
T ss_pred CCCCEEEEEeCCC---------------------eEEEEECCCCCEeEEecccccccCCceE-----EEEEcCCCEEEEE
Confidence 7 88888875422 3788999998776544 1 1112111 1112 23445544
Q ss_pred eeceeEEEEEEEccCCeEEEee
Q 014429 203 SLRYQTIHILQVRDLGNLVDVR 224 (424)
Q Consensus 203 S~q~QtIhi~qI~~~G~fv~vr 224 (424)
+- --+|+++.+. .|+.+..-
T Consensus 271 ~~-d~~i~~wd~~-~~~~~~~~ 290 (615)
T 1pgu_A 271 GA-DATIRVWDVT-TSKCVQKW 290 (615)
T ss_dssp ET-TSEEEEEETT-TTEEEEEE
T ss_pred cC-CCcEEEEECC-CCcEEEEE
Confidence 43 3678888876 36655443
No 74
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=68.94 E-value=21 Score=32.96 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=60.9
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ 131 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr 131 (424)
-.|+|||++|++-+.|. .|.||.... +.. ..++. .+.+. + -+.-|..||+
T Consensus 170 ~~~spdg~~lasg~~dg-~i~iwd~~~-------~~~------------------~~~~~-~h~~~-v--~~l~~spd~~ 219 (321)
T 3ow8_A 170 IAYSPDGKYLASGAIDG-IINIFDIAT-------GKL------------------LHTLE-GHAMP-I--RSLTFSPDSQ 219 (321)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEETTT-------TEE------------------EEEEC-CCSSC-C--CEEEECTTSC
T ss_pred EEECCCCCEEEEEcCCC-eEEEEECCC-------CcE------------------EEEEc-ccCCc-e--eEEEEcCCCC
Confidence 47999999998888764 688887651 100 00000 00111 0 1344677888
Q ss_pred EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeeeceeEE
Q 014429 132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTI 209 (424)
Q Consensus 132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~QtI 209 (424)
+++.|+.- -++.|+|+.+|....+..-+.+.|. .|... +..|+.-| .-.+|
T Consensus 220 ~l~s~s~d---------------------g~i~iwd~~~~~~~~~~~~h~~~v~-----~~~~sp~~~~l~s~s-~D~~v 272 (321)
T 3ow8_A 220 LLVTASDD---------------------GYIKIYDVQHANLAGTLSGHASWVL-----NVAFCPDDTHFVSSS-SDKSV 272 (321)
T ss_dssp EEEEECTT---------------------SCEEEEETTTCCEEEEECCCSSCEE-----EEEECTTSSEEEEEE-TTSCE
T ss_pred EEEEEcCC---------------------CeEEEEECCCcceeEEEcCCCCceE-----EEEECCCCCEEEEEe-CCCcE
Confidence 87766432 2478899999877654433332221 11111 33444444 34678
Q ss_pred EEEEEccCCeEE
Q 014429 210 HILQVRDLGNLV 221 (424)
Q Consensus 210 hi~qI~~~G~fv 221 (424)
.|+.+. .|+.+
T Consensus 273 ~iwd~~-~~~~~ 283 (321)
T 3ow8_A 273 KVWDVG-TRTCV 283 (321)
T ss_dssp EEEETT-TTEEE
T ss_pred EEEeCC-CCEEE
Confidence 888876 35543
No 75
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=68.49 E-value=76 Score=29.51 Aligned_cols=121 Identities=6% Similarity=-0.029 Sum_probs=70.5
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCceE
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgry 132 (424)
.|+|||++|++-+.....|.+|.... ++. ... +..++. =...-+..||++
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~-------~~~------------------~~~--~~~~~~---~~~~~~~~~g~~ 267 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKT-------KLE------------------IRK--TDKIGL---PRGLLLSKDGKE 267 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTT-------TEE------------------EEE--CCCCSE---EEEEEECTTSSE
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCC-------CcE------------------EEE--ecCCCC---ceEEEEcCCCCE
Confidence 68889988877676666777777641 100 000 111111 134556789999
Q ss_pred EEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeeeeeeceeEEE
Q 014429 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAIVSLRYQTIH 210 (424)
Q Consensus 133 vivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAILS~q~QtIh 210 (424)
+++++...-.. .-++-+++++|+.+|.+......... -.++.+. ++.|.+.+-..-+|+
T Consensus 268 l~~~~~~~~~~-------------~~~dg~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~g~~l~~~~~~~~~v~ 328 (433)
T 3bws_A 268 LYIAQFSASNQ-------------ESGGGRLGIYSMDKEKLIDTIGPPGN------KRHIVSGNTENKIYVSDMCCSKIE 328 (433)
T ss_dssp EEEEEEESCTT-------------CSCCEEEEEEETTTTEEEEEEEEEEC------EEEEEECSSTTEEEEEETTTTEEE
T ss_pred EEEEECCCCcc-------------ccCCCeEEEEECCCCcEEeeccCCCC------cceEEECCCCCEEEEEecCCCEEE
Confidence 88876432100 02467899999999987665432221 1133333 335666656677899
Q ss_pred EEEEccCCeEEEe
Q 014429 211 ILQVRDLGNLVDV 223 (424)
Q Consensus 211 i~qI~~~G~fv~v 223 (424)
++.+. +|+.+..
T Consensus 329 v~d~~-~~~~~~~ 340 (433)
T 3bws_A 329 VYDLK-EKKVQKS 340 (433)
T ss_dssp EEETT-TTEEEEE
T ss_pred EEECC-CCcEEEE
Confidence 99887 4766543
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=67.77 E-value=46 Score=34.09 Aligned_cols=110 Identities=7% Similarity=0.081 Sum_probs=63.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCceE
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgry 132 (424)
.|+|||++|++-+.| ..|.||.... +.. ..++. .+.+.. -+.-|..||++
T Consensus 20 ~~sp~~~~la~~~~~-g~v~iwd~~~-------~~~------------------~~~~~-~~~~~v---~~~~~s~~~~~ 69 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYS-GRVEIWNYET-------QVE------------------VRSIQ-VTETPV---RAGKFIARKNW 69 (814)
T ss_dssp EECSSSSEEEEEETT-SEEEEEETTT-------TEE------------------EEEEE-CCSSCE---EEEEEEGGGTE
T ss_pred EECCCCCEEEEEeCC-CEEEEEECCC-------Cce------------------EEEEe-cCCCcE---EEEEEeCCCCE
Confidence 799999998887754 5799998751 100 01111 111111 14556788999
Q ss_pred EEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEE---eeccceeeeecceeeeeeeceeEE
Q 014429 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFIN---LAHNMGVFLYDDLLAIVSLRYQTI 209 (424)
Q Consensus 133 vivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~---LsHN~Gv~Ly~dlLAILS~q~QtI 209 (424)
+++|+. +-++.++|+.+|...-+..-+.+.|. ++.+ +..|++ +-.-.+|
T Consensus 70 l~~~~~---------------------dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~~-~~~dg~i 121 (814)
T 3mkq_A 70 IIVGSD---------------------DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPT------KPYVLS-GSDDLTV 121 (814)
T ss_dssp EEEEET---------------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSS------SSEEEE-EETTSEE
T ss_pred EEEEeC---------------------CCeEEEEECCCCcEEEEEecCCCCEEEEEEeCC------CCEEEE-EcCCCEE
Confidence 888753 22588999999977655544444332 1111 223443 3345778
Q ss_pred EEEEEccCCeE
Q 014429 210 HILQVRDLGNL 220 (424)
Q Consensus 210 hi~qI~~~G~f 220 (424)
.|+.+...+..
T Consensus 122 ~vw~~~~~~~~ 132 (814)
T 3mkq_A 122 KLWNWENNWAL 132 (814)
T ss_dssp EEEEGGGTSEE
T ss_pred EEEECCCCceE
Confidence 88887643343
No 77
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=67.71 E-value=26 Score=33.54 Aligned_cols=24 Identities=25% Similarity=0.501 Sum_probs=20.3
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|+|||++|++=|.|. .|.||...
T Consensus 303 ~~spdg~~l~s~~~D~-~i~iwd~~ 326 (435)
T 4e54_B 303 CFSPDGARLLTTDQKS-EIRVYSAS 326 (435)
T ss_dssp CBCTTSSEEEEEESSS-CEEEEESS
T ss_pred eECCCCCeeEEEcCCC-EEEEEECC
Confidence 6999999999988775 58898876
No 78
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=67.69 E-value=31 Score=32.02 Aligned_cols=24 Identities=13% Similarity=0.228 Sum_probs=20.5
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|+|||++|++-+.| ..+.+|...
T Consensus 63 ~~s~~g~~l~~~~~d-~~v~i~d~~ 86 (420)
T 3vl1_A 63 TFEKVGSHLYKARLD-GHDFLFNTI 86 (420)
T ss_dssp EEEEEETTEEEEEET-TEEEEEECC
T ss_pred eeeecCCeEEEEEcC-CcEEEEEec
Confidence 699999999999987 478888865
No 79
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=66.58 E-value=75 Score=28.75 Aligned_cols=29 Identities=14% Similarity=0.292 Sum_probs=22.9
Q ss_pred CceeeeeCC-CCCeEEEeeCCCceEEEEeec
Q 014429 48 DHSFRKFTD-DGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 48 ~~~lRKFTp-DG~yLIaFS~dq~sL~vYry~ 77 (424)
+..--.|+| ||++|++-+.|. .|.||...
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg-~i~iw~~~ 74 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDG-VIVLYDLE 74 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTS-CEEEEECC
T ss_pred cEEEEEEecCCCCEEEEEcCCC-eEEEEECC
Confidence 344456999 999999888764 69999887
No 80
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=66.13 E-value=7.3 Score=35.83 Aligned_cols=28 Identities=7% Similarity=0.144 Sum_probs=20.7
Q ss_pred ceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 49 HSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 49 ~~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
..--.|+|||++|++=|. ...|.||...
T Consensus 14 v~~~~~s~~g~~l~~~~~-d~~i~iw~~~ 41 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTA-TNQVELYEQD 41 (377)
T ss_dssp CSCCEECSSSSEEECCCS-SSCBCEEEEE
T ss_pred EEEEEECCCCCEEEEecC-CCEEEEEEcc
Confidence 333479999998776555 4678999887
No 81
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=64.92 E-value=32 Score=32.90 Aligned_cols=26 Identities=4% Similarity=0.096 Sum_probs=21.3
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|+|+++++-+.....+.||..+
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETT
T ss_pred eeecCCCceEEEEecCcceeeEEecc
Confidence 36999999888877777789999876
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=64.58 E-value=77 Score=28.13 Aligned_cols=130 Identities=9% Similarity=0.057 Sum_probs=67.1
Q ss_pred eeeeeCCCCCeEEEeeCC----CceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeE
Q 014429 50 SFRKFTDDGQYLISFSRN----HQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFL 125 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~d----q~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsL 125 (424)
.--.|+|||++|++-+.+ ...|.+|............. . .. .....+....+... --+.-
T Consensus 119 ~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~-~-~~------------~~~~~~~~~~~~~~--~~~~~ 182 (369)
T 3zwl_B 119 KRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK-V-SE------------EPIHKIITHEGLDA--ATVAG 182 (369)
T ss_dssp EEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE-E-CS------------SCSEEEECCTTCCC--EEEEE
T ss_pred EEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc-c-cc------------ceeeeccCCcCccc--eeEEE
Confidence 334699999999998766 36889998873221111000 0 00 01111111111111 12344
Q ss_pred EecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccC-ceEeeeeeeccceEEeeccceeee--ecceeeee
Q 014429 126 SMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLED-GVVLDEKVFHNDFINLAHNMGVFL--YDDLLAIV 202 (424)
Q Consensus 126 ft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~-G~v~D~~~f~~D~I~LsHN~Gv~L--y~dlLAIL 202 (424)
|..+|+++++|+.. =++.++|+.+ +.......-+.+.|. ++.+ -++.|++-
T Consensus 183 ~~~~~~~l~~~~~d---------------------g~i~i~d~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~ 236 (369)
T 3zwl_B 183 WSTKGKYIIAGHKD---------------------GKISKYDVSNNYEYVDSIDLHEKSIS-----DMQFSPDLTYFITS 236 (369)
T ss_dssp ECGGGCEEEEEETT---------------------SEEEEEETTTTTEEEEEEECCSSCEE-----EEEECTTSSEEEEE
T ss_pred EcCCCCEEEEEcCC---------------------CEEEEEECCCCcEeEEEEecCCCcee-----EEEECCCCCEEEEe
Confidence 66788888876432 2478888888 565554443333221 1111 13344443
Q ss_pred eeceeEEEEEEEccCCeEEEe
Q 014429 203 SLRYQTIHILQVRDLGNLVDV 223 (424)
Q Consensus 203 S~q~QtIhi~qI~~~G~fv~v 223 (424)
+ .--+|+|+.+.. |+.+..
T Consensus 237 ~-~d~~i~v~d~~~-~~~~~~ 255 (369)
T 3zwl_B 237 S-RDTNSFLVDVST-LQVLKK 255 (369)
T ss_dssp E-TTSEEEEEETTT-CCEEEE
T ss_pred c-CCceEEEEECCC-Cceeee
Confidence 3 446788888764 555443
No 83
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=64.44 E-value=91 Score=28.95 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=21.8
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
+..--.|+|||++|++=|.|. .+.||...
T Consensus 66 ~V~~~~~s~d~~~l~s~s~Dg-~v~vWd~~ 94 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQDG-KVIVWDSF 94 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTS-EEEEEETT
T ss_pred eEEEEEECCCCCEEEEEeCCC-eEEEEECC
Confidence 344557999999998887765 68888743
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=64.07 E-value=75 Score=27.85 Aligned_cols=27 Identities=4% Similarity=-0.081 Sum_probs=21.6
Q ss_pred ceeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 49 HSFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 49 ~~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
..--.|+|||++|++-+ ...+.||...
T Consensus 54 v~~~~~~~~~~~l~~~~--dg~i~iw~~~ 80 (337)
T 1gxr_A 54 VCAVTISNPTRHVYTGG--KGCVKVWDIS 80 (337)
T ss_dssp CCEEEECSSSSEEEEEC--BSEEEEEETT
T ss_pred eEEEEEecCCcEEEEcC--CCeEEEEECC
Confidence 34456999999988877 5789999886
No 85
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=63.01 E-value=15 Score=35.99 Aligned_cols=24 Identities=25% Similarity=0.415 Sum_probs=19.6
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|||||++|++-|.| ..|.||.+.
T Consensus 515 ~~s~dg~~l~s~~~d-g~v~lwd~~ 538 (577)
T 2ymu_A 515 AFSPDGQTIASASDD-KTVKLWNRN 538 (577)
T ss_dssp EECTTSSCEEEEETT-SEEEEECTT
T ss_pred EEcCCCCEEEEEECc-CEEEEEeCC
Confidence 599999999987766 469998754
No 86
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=62.35 E-value=6 Score=37.53 Aligned_cols=24 Identities=17% Similarity=0.301 Sum_probs=20.3
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|||||++|+.=|.|. .|.|++-.
T Consensus 319 ~fSpdg~~laS~S~D~-tvrvw~ip 342 (365)
T 4h5i_A 319 TISPDSTYVASVSAAN-TIHIIKLP 342 (365)
T ss_dssp EECTTSCEEEEEETTS-EEEEEECC
T ss_pred EECCCCCEEEEEeCCC-eEEEEEcC
Confidence 6999999999988775 68998863
No 87
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=61.35 E-value=83 Score=27.45 Aligned_cols=81 Identities=12% Similarity=0.200 Sum_probs=49.3
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCceE
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF 132 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgry 132 (424)
-||||| +||.+.|. .|.|+... + ++ ...++.+...+..+. +.-|..+|++
T Consensus 32 ~WS~~~--~lAvg~D~-tV~iWd~~--t-----g~------------------~~~~~~~~~~~~~V~--~v~~~~~~~~ 81 (318)
T 4ggc_A 32 DWSSGN--VLAVALDN-SVYLWSAS--S-----GD------------------ILQLLQMEQPGEYIS--SVAWIKEGNY 81 (318)
T ss_dssp EECTTS--EEEEEETT-EEEEEETT--T-----CC------------------EEEEEECCSTTCCEE--EEEECTTSSE
T ss_pred EECCCC--EEEEEeCC-EEEEEECC--C-----CC------------------EEEEEEecCCCCeEE--EEEECCCCCE
Confidence 489997 78888775 68888764 0 11 111222222222221 4557789999
Q ss_pred EEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceE
Q 014429 133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFI 184 (424)
Q Consensus 133 vivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I 184 (424)
++.|+.- -++.|+|+++|...-+..-+.+.+
T Consensus 82 l~sgs~D---------------------g~v~iw~~~~~~~~~~~~~h~~~~ 112 (318)
T 4ggc_A 82 LAVGTSS---------------------AEVQLWDVQQQKRLRNMTSHSARV 112 (318)
T ss_dssp EEEEETT---------------------SEEEEEETTTTEEEEEEECCSSCE
T ss_pred EEEEECC---------------------CcEEEeecCCceeEEEecCccceE
Confidence 8876532 258899999998876665554443
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=61.16 E-value=1.2e+02 Score=29.50 Aligned_cols=26 Identities=15% Similarity=0.452 Sum_probs=19.9
Q ss_pred eeeeCCC-CCeEEEeeCCCceEEEEeec
Q 014429 51 FRKFTDD-GQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 51 lRKFTpD-G~yLIaFS~dq~sL~vYry~ 77 (424)
--.|+|| |++|++-+.| ..|.||...
T Consensus 211 ~~~~~~~~~~~l~~~~~d-g~i~vwd~~ 237 (615)
T 1pgu_A 211 DVEFSPDSGEFVITVGSD-RKISCFDGK 237 (615)
T ss_dssp EEEECSTTCCEEEEEETT-CCEEEEETT
T ss_pred EEEECCCCCCEEEEEeCC-CeEEEEECC
Confidence 3479999 9988887765 468888764
No 89
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=60.56 E-value=8.4 Score=36.74 Aligned_cols=74 Identities=15% Similarity=0.101 Sum_probs=54.2
Q ss_pred EEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeeceeEEEEEEEccCCeEEEeeeeC-----CccCcchHH
Q 014429 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIG-----SFCREDDEL 236 (424)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~QtIhi~qI~~~G~fv~vrtIG-----~fc~eDD~l 236 (424)
+++.||+++|++..+..+... .+-.|+.+.++.|-++.-+..+|.++... +++.+..=..| ..|+++..+
T Consensus 45 ~v~~iD~~tg~v~~~i~l~~~----~fgeGi~~~g~~lyv~t~~~~~v~viD~~-t~~v~~~i~~g~~~g~glt~Dg~~l 119 (266)
T 2iwa_A 45 SVRQVALQTGKVENIHKMDDS----YFGEGLTLLNEKLYQVVWLKNIGFIYDRR-TLSNIKNFTHQMKDGWGLATDGKIL 119 (266)
T ss_dssp EEEEEETTTCCEEEEEECCTT----CCEEEEEEETTEEEEEETTCSEEEEEETT-TTEEEEEEECCSSSCCEEEECSSSE
T ss_pred EEEEEECCCCCEEEEEecCCC----cceEEEEEeCCEEEEEEecCCEEEEEECC-CCcEEEEEECCCCCeEEEEECCCEE
Confidence 599999999999988766431 23358999999999999999999998865 46665544446 245555555
Q ss_pred HHhh
Q 014429 237 FLIS 240 (424)
Q Consensus 237 ~l~~ 240 (424)
+++.
T Consensus 120 ~vs~ 123 (266)
T 2iwa_A 120 YGSD 123 (266)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5543
No 90
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=60.44 E-value=22 Score=31.71 Aligned_cols=26 Identities=23% Similarity=0.146 Sum_probs=21.2
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
--+|+|||++|++-+.| ..|.||...
T Consensus 16 ~~~~s~~~~~l~~~~~d-~~v~iw~~~ 41 (342)
T 1yfq_A 16 DIKIIPSKSLLLITSWD-GSLTVYKFD 41 (342)
T ss_dssp EEEEEGGGTEEEEEETT-SEEEEEEEE
T ss_pred EEEEcCCCCEEEEEcCC-CeEEEEEeC
Confidence 34699999999887766 679999886
No 91
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=59.61 E-value=88 Score=27.15 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=20.8
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++-+.| ..+.||...
T Consensus 17 ~~~~~~~~~l~~~~~d-g~i~iw~~~ 41 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSD-QHIKVFKLD 41 (351)
T ss_dssp EEECSSSSEEEEEETT-SEEEEEEEC
T ss_pred EEEcCCCCEEEEeeCC-CeEEEEECC
Confidence 3699999999887766 579999987
No 92
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=58.86 E-value=83 Score=32.46 Aligned_cols=57 Identities=12% Similarity=0.050 Sum_probs=31.1
Q ss_pred eeEEEEEEccCceEeeeee-e-ccceEEeeccceeeeecceeeeeeeceeEEEEEEEccCCe
Q 014429 160 KITFHLLRLEDGVVLDEKV-F-HNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGN 219 (424)
Q Consensus 160 ~ytfhlVdL~~G~v~D~~~-f-~~D~I~LsHN~Gv~Ly~dlLAILS~q~QtIhi~qI~~~G~ 219 (424)
+.+++++|+.+|....... + ..+...| .++.+.++-|.+.....-+..|+.+..+|.
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l---~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASL---LSVSIVGGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEE---EEEEEETTEEEEEEEETTEEEEEEEETTCC
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeE---EEEEEECCEEEEEEEECCEEEEEEEeCCCC
Confidence 4678889988875311111 1 1101111 245666777766666666667766654455
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=57.93 E-value=35 Score=32.04 Aligned_cols=25 Identities=8% Similarity=-0.066 Sum_probs=20.1
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
=.|+|||++|++=|.| ..|.||..+
T Consensus 220 ~~~s~~~~~l~s~~~d-g~i~iwd~~ 244 (437)
T 3gre_A 220 ICIDEECCVLILGTTR-GIIDIWDIR 244 (437)
T ss_dssp EEECTTSCEEEEEETT-SCEEEEETT
T ss_pred EEECCCCCEEEEEcCC-CeEEEEEcC
Confidence 3589999999988877 568888876
No 94
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=57.13 E-value=75 Score=30.23 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=19.6
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++=|.| ..+.||...
T Consensus 156 v~~~~~~~~l~sgs~D-~~i~iwd~~ 180 (410)
T 1vyh_C 156 ISFDHSGKLLASCSAD-MTIKLWDFQ 180 (410)
T ss_dssp EEECTTSSEEEEEETT-SCCCEEETT
T ss_pred EEEcCCCCEEEEEeCC-CeEEEEeCC
Confidence 3689999988887776 558888875
No 95
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=57.06 E-value=59 Score=29.85 Aligned_cols=49 Identities=18% Similarity=0.172 Sum_probs=28.1
Q ss_pred EEEEEEccCceEeeeeeeccceEEeeccceeeeec---ceeeeeeeceeEEEEEEEcc
Q 014429 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYD---DLLAIVSLRYQTIHILQVRD 216 (424)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~---dlLAILS~q~QtIhi~qI~~ 216 (424)
++.++|+.+|...-+..-+.+.|. .+.... .+||.-|- --+|+|+.+..
T Consensus 286 ~v~~wd~~~~~~~~~~~~~~~~v~-----~~~~s~~~~~~l~s~~~-d~~i~iw~~~~ 337 (416)
T 2pm9_A 286 TVLLWNPESAEQLSQFPARGNWCF-----KTKFAPEAPDLFACASF-DNKIEVQTLQN 337 (416)
T ss_dssp EEEEECSSSCCEEEEEECSSSCCC-----CEEECTTCTTEEEECCS-SSEEEEEESCC
T ss_pred CEEEeeCCCCccceeecCCCCceE-----EEEECCCCCCEEEEEec-CCcEEEEEccC
Confidence 588999999977655443222211 222322 34554443 46788888864
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=56.47 E-value=71 Score=33.56 Aligned_cols=25 Identities=12% Similarity=0.208 Sum_probs=20.5
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++-+.| ..|.||...
T Consensus 15 l~~s~dg~~latg~~d-g~I~vwd~~ 39 (753)
T 3jro_A 15 AVLDYYGKRLATCSSD-KTIKIFEVE 39 (753)
T ss_dssp ECCCSSSCCEEEEETT-TEEEEEEEE
T ss_pred EEECCCCCeEEEEECC-CcEEEEecC
Confidence 3699999998887765 679999876
No 97
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=54.44 E-value=1e+02 Score=27.96 Aligned_cols=25 Identities=8% Similarity=0.085 Sum_probs=20.8
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
=.|+|||++|++-|.| ..+.||...
T Consensus 152 ~~~~~~~~~l~~~~~d-~~i~iwd~~ 176 (377)
T 3dwl_C 152 LDWHPNNVLLAAGCAD-RKAYVLSAY 176 (377)
T ss_dssp EEECTTSSEEEEEESS-SCEEEEEEC
T ss_pred EEEcCCCCEEEEEeCC-CEEEEEEEE
Confidence 3699999999888877 569999885
No 98
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=53.93 E-value=1.6e+02 Score=30.06 Aligned_cols=26 Identities=19% Similarity=0.376 Sum_probs=20.6
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeecC
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPMW 78 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~g 78 (424)
-.|+|||++|++=|.| ..|.||...+
T Consensus 478 ~~~s~~~~~l~s~s~D-~~i~iwd~~~ 503 (694)
T 3dm0_A 478 VAFSLDNRQIVSASRD-RTIKLWNTLG 503 (694)
T ss_dssp EEECTTSSCEEEEETT-SCEEEECTTS
T ss_pred EEEeCCCCEEEEEeCC-CEEEEEECCC
Confidence 3699999999998876 4688887653
No 99
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=53.47 E-value=96 Score=29.49 Aligned_cols=26 Identities=15% Similarity=0.032 Sum_probs=20.9
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
--.|+|||++|++=|.|. .|.||.+.
T Consensus 113 ~~~~~p~~~~l~s~s~Dg-~i~vwd~~ 138 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASEDA-TIKVWDYE 138 (410)
T ss_dssp EEEECSSSSEEEEEESSS-CEEEEETT
T ss_pred EEEEcCCCCEEEEEeCCC-eEEEEECC
Confidence 346999999998888765 68899875
No 100
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=53.18 E-value=85 Score=29.67 Aligned_cols=25 Identities=12% Similarity=0.167 Sum_probs=19.7
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++-|.|. .|.||...
T Consensus 316 ~~~~~~~~~l~sg~~dg-~i~vwd~~ 340 (464)
T 3v7d_B 316 TIYDHERKRCISASMDT-TIRIWDLE 340 (464)
T ss_dssp EEEETTTTEEEEEETTS-CEEEEETT
T ss_pred EEEcCCCCEEEEEeCCC-cEEEEECC
Confidence 46899999998888765 58888765
No 101
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=53.08 E-value=1.1e+02 Score=26.43 Aligned_cols=26 Identities=23% Similarity=0.307 Sum_probs=20.7
Q ss_pred eeeCCC--CCeEEEeeCCCceEEEEeecC
Q 014429 52 RKFTDD--GQYLISFSRNHQDLIVYRPMW 78 (424)
Q Consensus 52 RKFTpD--G~yLIaFS~dq~sL~vYry~g 78 (424)
-.|+|| |++|++-+.| ..|.||....
T Consensus 116 ~~~~~~~~~~~l~~~~~d-g~v~iwd~~~ 143 (351)
T 3f3f_A 116 VKFAPAHLGLKLACLGND-GILRLYDALE 143 (351)
T ss_dssp EEECCGGGCSEEEEEETT-CEEEEEECSS
T ss_pred EEEcCCCCCcEEEEecCC-CcEEEecCCC
Confidence 469999 9998887766 4799998763
No 102
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=51.97 E-value=1.8e+02 Score=30.26 Aligned_cols=71 Identities=11% Similarity=-0.083 Sum_probs=38.2
Q ss_pred ecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCce--EeeeeeeccceEEeeccceeeeecceeeeeee
Q 014429 127 MEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGV--VLDEKVFHNDFINLAHNMGVFLYDDLLAIVSL 204 (424)
Q Consensus 127 t~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~--v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~ 204 (424)
..||+.+++.+.. .-.+..++++|+.+|. ... ..-..+.+ + .++...++-|.+.+.
T Consensus 324 ~~dg~~l~~~s~~-----------------~~~~~~l~~~d~~~~~~~~~~-l~~~~~~~-l---~~~~~~~~~lv~~~~ 381 (741)
T 1yr2_A 324 DGVGDQLWFVSGD-----------------GAPLKKIVRVDLSGSTPRFDT-VVPESKDN-L---ESVGIAGNRLFASYI 381 (741)
T ss_dssp EEETTEEEEEECT-----------------TCTTCEEEEEECSSSSCEEEE-EECCCSSE-E---EEEEEEBTEEEEEEE
T ss_pred eccCCEEEEEECC-----------------CCCCCEEEEEeCCCCccccEE-EecCCCCe-E---EEEEEECCEEEEEEE
Confidence 3678877776432 1123568888888852 211 11111111 1 255666777766666
Q ss_pred ceeEEEEEEEccCCe
Q 014429 205 RYQTIHILQVRDLGN 219 (424)
Q Consensus 205 q~QtIhi~qI~~~G~ 219 (424)
..-..+|+.+..+|.
T Consensus 382 ~dg~~~l~~~~~~g~ 396 (741)
T 1yr2_A 382 HDAKSQVLAFDLDGK 396 (741)
T ss_dssp ETTEEEEEEEETTSC
T ss_pred ECCEEEEEEEeCCCC
Confidence 666666666653454
No 103
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=51.89 E-value=41 Score=34.91 Aligned_cols=105 Identities=16% Similarity=-0.026 Sum_probs=60.1
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcC--------CCCeee---ee
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLA--------SCNELI---CK 121 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la--------~~~e~L---~r 121 (424)
.+|||||+|-+=...+-+|.||+-..+.. .++.-++.+- ..|..+ =|
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~----------------------~~lv~~I~tGG~~~~~~~~~G~~~~ggPr 384 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFK----------------------PVLTGKVKLGGIFHRADHPAGHKLTGAPQ 384 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTS----------------------CEEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCC----------------------cEEEEEEEeCCeeccccccccccCCCCCC
Confidence 39999999999999999999998752110 0011111111 011111 24
Q ss_pred eeeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEE--EccCceEeeeeeeccceE-Eeec
Q 014429 122 DFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLL--RLEDGVVLDEKVFHNDFI-NLAH 188 (424)
Q Consensus 122 efsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlV--dL~~G~v~D~~~f~~D~I-~LsH 188 (424)
++. ++.||++++||.+-+..-+ -+=+|.=.+.++..+ |-++| +.....|..|+- .++|
T Consensus 385 ~~~-lSpDGk~LyVaNsl~~~wd-------~Qfyp~~~~~~~~~~~vd~~~G-L~~~~~f~vdf~~~~~h 445 (462)
T 2ece_A 385 MLE-ISRDGRRVYVTNSLYSTWD-------NQFYPEGLKGWMVKLNANPSGG-LEIDKEFFVDFGEARSH 445 (462)
T ss_dssp CEE-ECTTSSEEEEECCCCHHHH-------HHHSTTCCCCEEEEEEECTTSC-EEEEEEEEEECTTSEEE
T ss_pred EEE-EcCCCCEEEEEcCCccccc-------ccccCCCCceEEEEEEecCCCC-ceeCCCEEeecccCcce
Confidence 443 5679999999854221000 000222233455544 78899 888888988874 4455
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=51.71 E-value=1.3e+02 Score=26.77 Aligned_cols=32 Identities=9% Similarity=0.099 Sum_probs=23.3
Q ss_pred cceeeeeeeceeEEEEEEEccCCeEEEeeeeCC
Q 014429 196 DDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGS 228 (424)
Q Consensus 196 ~dlLAILS~q~QtIhi~qI~~~G~fv~vrtIG~ 228 (424)
+..||+-+- -.+|+||.+..+|++..+..+..
T Consensus 268 g~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 268 GNVLALSGG-DNKVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp SCCEEEEES-SSSEEEEEEEETTEEEEEEEEC-
T ss_pred CCEEEEecC-CCcEEEEeCCCCCccccccceec
Confidence 345666555 67899999987788888877654
No 105
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=51.63 E-value=2.2e+02 Score=29.31 Aligned_cols=15 Identities=33% Similarity=0.711 Sum_probs=11.9
Q ss_pred eeeCCCCCeEEEeeC
Q 014429 52 RKFTDDGQYLISFSR 66 (424)
Q Consensus 52 RKFTpDG~yLIaFS~ 66 (424)
-.|||||++|+..+.
T Consensus 238 ~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 238 AELSDDGRYVLLSIR 252 (710)
T ss_dssp EEECTTSCEEEEEEE
T ss_pred EEEcCCCCEEEEEEE
Confidence 468999998887765
No 106
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=50.95 E-value=1.4e+02 Score=26.74 Aligned_cols=26 Identities=4% Similarity=-0.050 Sum_probs=20.7
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
--.|+|||++|++-+.| ..+.+|.+.
T Consensus 101 ~~~~~~~~~~l~~~~~d-~~v~i~d~~ 126 (372)
T 1k8k_C 101 CVRWAPNEKKFAVGSGS-RVISICYFE 126 (372)
T ss_dssp EEEECTTSSEEEEEETT-SSEEEEEEE
T ss_pred EEEECCCCCEEEEEeCC-CEEEEEEec
Confidence 34799999998887765 568888887
No 107
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=50.57 E-value=1.3e+02 Score=27.73 Aligned_cols=119 Identities=8% Similarity=0.012 Sum_probs=0.0
Q ss_pred eeCCCCCeEEEeeCC---------CceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeee
Q 014429 53 KFTDDGQYLISFSRN---------HQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDF 123 (424)
Q Consensus 53 KFTpDG~yLIaFS~d---------q~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~ref 123 (424)
.|+|||+.+++=..+ ...|.++... . .+...++.+..+. .=..
T Consensus 178 ~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--------t-----------------~~v~~~~~~~~g~---~p~~ 229 (328)
T 3dsm_A 178 VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--------T-----------------FTVEKQFKFKLGD---WPSE 229 (328)
T ss_dssp EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--------T-----------------TEEEEEEECCTTC---CCEE
T ss_pred EEcCCCCEEEEECCCccCCccccCCceEEEEECC--------C-----------------CeEEEEEecCCCC---Ccee
Q ss_pred eEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeee--ecceeee
Q 014429 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFL--YDDLLAI 201 (424)
Q Consensus 124 sLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~L--y~dlLAI 201 (424)
.-+..||+++.++.. +++++|+++|.+.....+... ...-.|+.+ -+..|-|
T Consensus 230 la~~~d~~~lyv~~~-----------------------~v~~~d~~t~~~~~~~~~~~~---~~~p~gi~vdp~~g~lyv 283 (328)
T 3dsm_A 230 VQLNGTRDTLYWINN-----------------------DIWRMPVEADRVPVRPFLEFR---DTKYYGLTVNPNNGEVYV 283 (328)
T ss_dssp EEECTTSCEEEEESS-----------------------SEEEEETTCSSCCSSCSBCCC---SSCEEEEEECTTTCCEEE
T ss_pred EEEecCCCEEEEEcc-----------------------EEEEEECCCCceeeeeeecCC---CCceEEEEEcCCCCeEEE
Q ss_pred ee----eceeEEEEEEEccCCeEEEeeeeC
Q 014429 202 VS----LRYQTIHILQVRDLGNLVDVRTIG 227 (424)
Q Consensus 202 LS----~q~QtIhi~qI~~~G~fv~vrtIG 227 (424)
-. ...-+|++|... |+++..=.+|
T Consensus 284 a~~~~y~~~~~V~v~d~~--g~~~~~i~~G 311 (328)
T 3dsm_A 284 ADAIDYQQQGIVYRYSPQ--GKLIDEFYVG 311 (328)
T ss_dssp EECTTSSSEEEEEEECTT--CCEEEEEEEE
T ss_pred EcccccccCCEEEEECCC--CCEEEEEEec
No 108
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=50.51 E-value=1.3e+02 Score=27.56 Aligned_cols=24 Identities=13% Similarity=0.115 Sum_probs=19.7
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|+|||++|++=|.|. .+.||...
T Consensus 233 ~~~p~~~~l~s~s~d~-~v~iwd~~ 256 (340)
T 1got_B 233 CFFPNGNAFATGSDDA-TCRLFDLR 256 (340)
T ss_dssp EECTTSSEEEEEETTS-CEEEEETT
T ss_pred EEcCCCCEEEEEcCCC-cEEEEECC
Confidence 6999999998877664 68888876
No 109
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=49.40 E-value=46 Score=33.31 Aligned_cols=38 Identities=11% Similarity=-0.046 Sum_probs=25.6
Q ss_pred eeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeee
Q 014429 123 FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVF 179 (424)
Q Consensus 123 fsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f 179 (424)
-..|+.||+++.|+.... +=++-+||++++++..+...
T Consensus 141 ~~a~spDGk~lyVan~~~-------------------~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 141 MTSLTPDGKTLLFYQFSP-------------------APAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp GEEECTTSSEEEEEECSS-------------------SCEEEEEETTTTEEEEEEEC
T ss_pred eEEEcCCCCEEEEEEcCC-------------------CCeEEEEECCCCcEEEEEEC
Confidence 467888999999974321 11466777777777776644
No 110
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=46.76 E-value=1.7e+02 Score=26.67 Aligned_cols=27 Identities=11% Similarity=0.148 Sum_probs=21.3
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.--.|+|||++|++=+.| ..+.||...
T Consensus 101 ~~~~~s~~~~~l~s~~~d-~~v~iw~~~ 127 (340)
T 1got_B 101 MTCAYAPSGNYVACGGLD-NICSIYNLK 127 (340)
T ss_dssp EEEEECTTSSEEEEEETT-CEEEEEETT
T ss_pred EEEEECCCCCEEEEEeCC-CeEEEEECc
Confidence 344799999999888876 578888875
No 111
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=45.77 E-value=67 Score=32.60 Aligned_cols=26 Identities=19% Similarity=0.094 Sum_probs=18.1
Q ss_pred eeeCCCCCeEEEeeCCCc--eEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQ--DLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~--sL~vYry~ 77 (424)
-.|||||++|+.-+.+.. ...||+..
T Consensus 361 ~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp EEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred eEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 478999998877776644 45666664
No 112
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=45.27 E-value=1.5e+02 Score=27.54 Aligned_cols=25 Identities=16% Similarity=0.169 Sum_probs=19.9
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++=|.| ..+.||..+
T Consensus 246 v~~~p~~~~l~s~s~D-~~v~lwd~~ 270 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDD-ATCRLYDLR 270 (354)
T ss_dssp EEECTTSSEEEEEETT-SCEEEEETT
T ss_pred EEEeCCCCEEEEEeCC-CeEEEEECC
Confidence 4789999988887766 568888876
No 113
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=41.78 E-value=1.9e+02 Score=25.83 Aligned_cols=104 Identities=13% Similarity=0.175 Sum_probs=57.5
Q ss_pred eeeeCC--CCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEec
Q 014429 51 FRKFTD--DGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSME 128 (424)
Q Consensus 51 lRKFTp--DG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~ 128 (424)
.-.|+| ||++|++-|.|. .|.||.... +.+ ..++. .+.+. + -+..|.+
T Consensus 189 ~~~~~~~~~~~~l~s~s~D~-~i~iWd~~~-------~~~------------------~~~~~-~h~~~-v--~~~~~~p 238 (304)
T 2ynn_A 189 YVDYYPLPDKPYMITASDDL-TIKIWDYQT-------KSC------------------VATLE-GHMSN-V--SFAVFHP 238 (304)
T ss_dssp EEEECCSTTCCEEEEEETTS-EEEEEETTT-------TEE------------------EEEEE-CCSSC-E--EEEEECS
T ss_pred EEEEEEcCCCCEEEEEcCCC-eEEEEeCCC-------Ccc------------------ceeeC-CCCCC-E--EEEEECC
Confidence 345554 888888887764 688888751 111 00110 11111 1 1345677
Q ss_pred CceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEE-ee-ccce-----eeeecceeee
Q 014429 129 GNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFIN-LA-HNMG-----VFLYDDLLAI 201 (424)
Q Consensus 129 dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~-Ls-HN~G-----v~Ly~dlLAI 201 (424)
++++++-|+.- =++.|+|+.+|.+..+.....+.|+ ++ |..| +.=++|-+.|
T Consensus 239 ~~~~l~s~s~D---------------------g~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~ 297 (304)
T 2ynn_A 239 TLPIIISGSED---------------------GTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297 (304)
T ss_dssp SSSEEEEEETT---------------------SCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEE
T ss_pred CCCEEEEEcCC---------------------CeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEE
Confidence 88866554322 2488999999998877766655553 33 3322 1224555555
Q ss_pred eeec
Q 014429 202 VSLR 205 (424)
Q Consensus 202 LS~q 205 (424)
+++.
T Consensus 298 ~~~~ 301 (304)
T 2ynn_A 298 LSLG 301 (304)
T ss_dssp EECC
T ss_pred EEec
Confidence 5544
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=40.54 E-value=25 Score=32.28 Aligned_cols=26 Identities=23% Similarity=0.503 Sum_probs=23.0
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++-|.+...+.||++.
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEc
Confidence 47999999999999866789999996
No 115
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=40.06 E-value=3e+02 Score=27.62 Aligned_cols=27 Identities=7% Similarity=0.201 Sum_probs=20.6
Q ss_pred eeeeeCCCCCeEEEeeCCCceEEEEee
Q 014429 50 SFRKFTDDGQYLISFSRNHQDLIVYRP 76 (424)
Q Consensus 50 ~lRKFTpDG~yLIaFS~dq~sL~vYry 76 (424)
.--.|+|||.++++-+.+...+.+|..
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~ 177 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEG 177 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEET
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEEC
Confidence 344699999986666777778999874
No 116
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=39.92 E-value=21 Score=31.75 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=20.4
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
=.|+|||++|++=|.|. .|.||+-.
T Consensus 312 l~~s~dg~~l~sgs~Dg-~v~iW~~~ 336 (340)
T 4aow_A 312 LAWSADGQTLFAGYTDN-LVRVWQVT 336 (340)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEEEE
T ss_pred EEECCCCCEEEEEeCCC-EEEEEeCC
Confidence 36999999999988775 68888764
No 117
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=39.86 E-value=20 Score=32.78 Aligned_cols=26 Identities=23% Similarity=0.293 Sum_probs=20.3
Q ss_pred eeeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 51 FRKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 51 lRKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
--.|||||++|++=|.|. .|.||+-.
T Consensus 291 ~~~~spdg~~l~sg~~Dg-~i~vWd~~ 316 (319)
T 3frx_A 291 SLAWSADGQTLFAGYTDN-VIRVWQVM 316 (319)
T ss_dssp EEEECTTSSEEEEEETTS-CEEEEEEE
T ss_pred EEEECCCCCEEEEeecCc-eEEEEEEe
Confidence 347999999999988775 57887653
No 118
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=38.97 E-value=1.9e+02 Score=24.95 Aligned_cols=56 Identities=11% Similarity=0.057 Sum_probs=31.7
Q ss_pred EEEEEEccCceEeeeeeeccceEEeeccceeeeecc-eeeeeeeceeEEEEEEEccCCeEEEee
Q 014429 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDD-LLAIVSLRYQTIHILQVRDLGNLVDVR 224 (424)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~d-lLAILS~q~QtIhi~qI~~~G~fv~vr 224 (424)
+++++|+.+|........+.+.|. ++....| -|++ +-.-.+|+|+.+.. |+.+...
T Consensus 247 ~v~iwd~~~~~~~~~~~~~~~~i~-----~~~~~~~~~~~~-~~~dg~i~iw~~~~-~~~~~~~ 303 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITLPAISIW-----SVDCMSNGDIIV-GSSDNLVRIFSQEK-SRWASED 303 (313)
T ss_dssp EEEEECTTTCCEEEEEECSSSCEE-----EEEECTTSCEEE-EETTSCEEEEESCG-GGCCC--
T ss_pred EEEEEECCCCceeEEEeccCceEE-----EEEEccCCCEEE-EeCCCcEEEEeCCC-Cceeehh
Confidence 589999999987776665554332 1122111 1222 44567888888764 5554433
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=38.66 E-value=21 Score=35.87 Aligned_cols=24 Identities=17% Similarity=0.362 Sum_probs=19.9
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEee
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRP 76 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry 76 (424)
=.|||||++|++=|.| ..+.||++
T Consensus 332 vafSPDG~~LaSGS~D-~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSHLLAGQKD-GNIFVYHY 355 (356)
T ss_dssp EEECSSSSEEEEECTT-SCEEEEEE
T ss_pred EEECCCCCEEEEEECC-CcEEEecC
Confidence 3799999999988765 67888876
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=35.68 E-value=26 Score=33.31 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=20.8
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCC
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLS 80 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~ 80 (424)
.|+|||++|++=| .-.+.++|-.|.+
T Consensus 366 afspdG~~LA~as--~~Gv~lvrL~gf~ 391 (393)
T 4gq1_A 366 CWHQDGSHLAIAT--EGSVLLTRLMGFT 391 (393)
T ss_dssp EECTTSSEEEEEE--SSEEEEEEEGGGC
T ss_pred EEcCCCCEEEEEe--CCCeEEEEEeCcc
Confidence 6999999998776 4568889988654
No 121
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=33.64 E-value=26 Score=31.95 Aligned_cols=30 Identities=10% Similarity=-0.264 Sum_probs=22.5
Q ss_pred CceeeeeCCCCCeEEEeeCCCceEEEEeecC
Q 014429 48 DHSFRKFTDDGQYLISFSRNHQDLIVYRPMW 78 (424)
Q Consensus 48 ~~~lRKFTpDG~yLIaFS~dq~sL~vYry~g 78 (424)
+..--.|+|||++|++-+.| ..|.||...|
T Consensus 396 ~v~~~~~s~~~~~l~~~~~d-g~i~iw~~~g 425 (425)
T 1r5m_A 396 YIFDLSWNCAGNKISVAYSL-QEGSVVAIPG 425 (425)
T ss_dssp CEEEEEECTTSSEEEEEESS-SCCEEEECCC
T ss_pred ceEEEEccCCCceEEEEecC-ceEEEEeecC
Confidence 33444699999998877765 5689998865
No 122
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=33.02 E-value=1.1e+02 Score=28.86 Aligned_cols=61 Identities=13% Similarity=0.169 Sum_probs=47.3
Q ss_pred EEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeeceeEEEEEEEccCCeEEEeeeeC
Q 014429 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIG 227 (424)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~QtIhi~qI~~~G~fv~vrtIG 227 (424)
++..||+++|++..+..+.... .+ .|+.+.++.|-+|.-+..+|++|... +++.+..=+.|
T Consensus 44 ~v~~vD~~tgkv~~~~~l~~~~--fg--eGi~~~~~~ly~ltw~~~~v~v~D~~-tl~~~~ti~~~ 104 (243)
T 3mbr_X 44 SVRKVDLETGRILQRAEVPPPY--FG--AGIVAWRDRLIQLTWRNHEGFVYDLA-TLTPRARFRYP 104 (243)
T ss_dssp EEEEEETTTCCEEEEEECCTTC--CE--EEEEEETTEEEEEESSSSEEEEEETT-TTEEEEEEECS
T ss_pred eEEEEECCCCCEEEEEeCCCCc--ce--eEEEEeCCEEEEEEeeCCEEEEEECC-cCcEEEEEeCC
Confidence 5889999999999888776542 22 48999999999999999999999875 45555443433
No 123
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=32.85 E-value=2.3e+02 Score=25.63 Aligned_cols=24 Identities=25% Similarity=0.371 Sum_probs=17.4
Q ss_pred eeCCCC-CeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDG-QYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG-~yLIaFS~dq~sL~vYry~ 77 (424)
.|+|+| ++|++=|.| ..+.++...
T Consensus 24 ~~~~~~~~~l~s~s~D-~~v~~W~~~ 48 (319)
T 3frx_A 24 ATSAGQPNLLLSASRD-KTLISWKLT 48 (319)
T ss_dssp EECSSCTTEEEEEETT-SEEEEEEEE
T ss_pred EccCCCccEEEEecCC-ccEEEecCC
Confidence 589976 666666655 678899876
No 124
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=32.35 E-value=3.1e+02 Score=25.44 Aligned_cols=114 Identities=10% Similarity=0.001 Sum_probs=64.8
Q ss_pred ceeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEec
Q 014429 49 HSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSME 128 (424)
Q Consensus 49 ~~lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~ 128 (424)
.++-.++++|..+++.+.|. .|.||.... ++. .......+.+... +.-|..
T Consensus 94 ~~~~~~~~s~~~l~~~~~d~-~v~lw~~~~-------~~~------------------~~~~~~~~~~~v~---~v~~s~ 144 (401)
T 4aez_A 94 YYLNLLDWSNLNVVAVALER-NVYVWNADS-------GSV------------------SALAETDESTYVA---SVKWSH 144 (401)
T ss_dssp TTCBCEEECTTSEEEEEETT-EEEEEETTT-------CCE------------------EEEEECCTTCCEE---EEEECT
T ss_pred ceEEEEeecCCCEEEEECCC-eEEEeeCCC-------CcE------------------eEeeecCCCCCEE---EEEECC
Confidence 45666888888999988664 688887751 100 0111111222211 334567
Q ss_pred CceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeeceeE
Q 014429 129 GNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQT 208 (424)
Q Consensus 129 dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~Qt 208 (424)
||+++++|+... ++.++|+.+|...-+..-+.+.|. .+...+++|+.-|- --+
T Consensus 145 ~~~~l~~~~~dg---------------------~i~iwd~~~~~~~~~~~~~~~~v~-----~~~~~~~~l~~~~~-dg~ 197 (401)
T 4aez_A 145 DGSFLSVGLGNG---------------------LVDIYDVESQTKLRTMAGHQARVG-----CLSWNRHVLSSGSR-SGA 197 (401)
T ss_dssp TSSEEEEEETTS---------------------CEEEEETTTCCEEEEECCCSSCEE-----EEEEETTEEEEEET-TSE
T ss_pred CCCEEEEECCCC---------------------eEEEEECcCCeEEEEecCCCCceE-----EEEECCCEEEEEcC-CCC
Confidence 899888875422 378888888876655543333322 23334566655554 367
Q ss_pred EEEEEEccCC
Q 014429 209 IHILQVRDLG 218 (424)
Q Consensus 209 Ihi~qI~~~G 218 (424)
|+++.+...+
T Consensus 198 i~i~d~~~~~ 207 (401)
T 4aez_A 198 IHHHDVRIAN 207 (401)
T ss_dssp EEEEETTSSS
T ss_pred EEEEecccCc
Confidence 7788776433
No 125
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=31.89 E-value=1.7e+02 Score=28.07 Aligned_cols=91 Identities=9% Similarity=0.123 Sum_probs=50.4
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcC--cccccCCCCCccccchhhh-hheeeEEEcCCCCeeeeeeeeEEecC
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCK--EEDCCRHDLPPKAKRFESF-FTQLYSVTLASCNELICKDFFLSMEG 129 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~--~~e~~~~~~~~r~~~F~~f-F~~~~~~~la~~~e~L~refsLft~d 129 (424)
.|.|+|..+++||+|...|.|--=.|-.-+-+ .++. .++|.- .+..-++.+... =....|+.|
T Consensus 263 ~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V---------~VID~~t~~vv~~i~~g~~-----p~~i~~s~D 328 (373)
T 2mad_H 263 TWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEV---------TSVTGLVGQTSSQISLGHD-----VDAISVAQD 328 (373)
T ss_pred ceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeE---------EEEECCCCEEEEEEECCCC-----cCeEEECCC
Confidence 45799999999999999887754332100000 0000 011100 122234444332 235577889
Q ss_pred ceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeee
Q 014429 130 NQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDE 176 (424)
Q Consensus 130 gryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~ 176 (424)
|++.++++...- =++.+||+++|++..+
T Consensus 329 g~~~l~v~~~~~-------------------~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 329 GGPDLYALSAGT-------------------EVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCeEEEEEcCCC-------------------CeEEEEECCCCCEEee
Confidence 996666432211 1488999999998765
No 126
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=31.34 E-value=3.3e+02 Score=25.49 Aligned_cols=111 Identities=21% Similarity=0.261 Sum_probs=65.2
Q ss_pred ceeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEec
Q 014429 49 HSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSME 128 (424)
Q Consensus 49 ~~lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~ 128 (424)
..+..++|||++|++-+.|. .|.||.... +.+ ..+.. .+.+. + -+..|..
T Consensus 271 ~~v~~~~~~~~~l~~~~~d~-~i~vwd~~~-------~~~------------------~~~~~-~~~~~-v--~~~~~~~ 320 (464)
T 3v7d_B 271 ASVRTVSGHGNIVVSGSYDN-TLIVWDVAQ-------MKC------------------LYILS-GHTDR-I--YSTIYDH 320 (464)
T ss_dssp SCEEEEEEETTEEEEEETTS-CEEEEETTT-------TEE------------------EEEEC-CCSSC-E--EEEEEET
T ss_pred ceEEEEcCCCCEEEEEeCCC-eEEEEECCC-------CcE------------------EEEec-CCCCC-E--EEEEEcC
Confidence 34556789999998888775 588887641 100 01110 11111 1 1344667
Q ss_pred CceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeeceeE
Q 014429 129 GNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQT 208 (424)
Q Consensus 129 dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~Qt 208 (424)
+|++++.|+... +++++|+.+|...-+..-+.+.|. .+.+-++.|+.-|-- .+
T Consensus 321 ~~~~l~sg~~dg---------------------~i~vwd~~~~~~~~~~~~h~~~v~-----~~~~~~~~l~s~s~d-g~ 373 (464)
T 3v7d_B 321 ERKRCISASMDT---------------------TIRIWDLENGELMYTLQGHTALVG-----LLRLSDKFLVSAAAD-GS 373 (464)
T ss_dssp TTTEEEEEETTS---------------------CEEEEETTTTEEEEEECCCSSCEE-----EEEECSSEEEEEETT-SE
T ss_pred CCCEEEEEeCCC---------------------cEEEEECCCCcEEEEEeCCCCcEE-----EEEEcCCEEEEEeCC-Cc
Confidence 888887764322 488999999987766544433332 233445666666654 67
Q ss_pred EEEEEEcc
Q 014429 209 IHILQVRD 216 (424)
Q Consensus 209 Ihi~qI~~ 216 (424)
|+++.+..
T Consensus 374 v~vwd~~~ 381 (464)
T 3v7d_B 374 IRGWDAND 381 (464)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 88988874
No 127
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=31.11 E-value=1.6e+02 Score=30.58 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=25.8
Q ss_pred EEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEee
Q 014429 125 LSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLD 175 (424)
Q Consensus 125 Lft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D 175 (424)
-+..||+++.+++... --|.++++++|+++|....
T Consensus 169 ~~SPDG~~la~~~~~~----------------G~e~~~i~v~dl~tg~~~~ 203 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDG----------------GSDWRTVKFVGVADGKPLA 203 (741)
T ss_dssp EECTTSSEEEEEEEET----------------TCSEEEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEEcCC----------------CCceEEEEEEECCCCCCCC
Confidence 4558999999876542 1146889999999997654
No 128
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=30.29 E-value=34 Score=33.37 Aligned_cols=25 Identities=24% Similarity=0.345 Sum_probs=20.6
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecC
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMW 78 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g 78 (424)
.|||||++|++-|.| ..|.||...|
T Consensus 64 ~fspdg~~las~~~d-~~i~vWd~~~ 88 (577)
T 2ymu_A 64 AFSPDGQTIASASDD-KTVKLWNRNG 88 (577)
T ss_dssp EECTTSSEEEEEETT-SCEEEEETTS
T ss_pred EECCCCCEEEEEeCC-CEEEEEECCC
Confidence 699999999988866 5688988654
No 129
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=29.81 E-value=3.1e+02 Score=24.72 Aligned_cols=79 Identities=13% Similarity=0.030 Sum_probs=42.4
Q ss_pred eeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeec--cceEEe---ecccee---ee
Q 014429 123 FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFH--NDFINL---AHNMGV---FL 194 (424)
Q Consensus 123 fsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~--~D~I~L---sHN~Gv---~L 194 (424)
+.-|..+|+++++|+... ..-++.++|+.+|...-...-. .+...+ +|+..| ..
T Consensus 238 ~i~~~~~~~~l~~~~~d~------------------~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSN------------------SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp EEEECSSTTEEEEEEEET------------------TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred eEEECCCCCEEEEEecCC------------------CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE
Confidence 344566888888775320 0046889999998765544320 000000 033222 22
Q ss_pred e--cceeeeeeeceeEEEEEEEccCCeEE
Q 014429 195 Y--DDLLAIVSLRYQTIHILQVRDLGNLV 221 (424)
Q Consensus 195 y--~dlLAILS~q~QtIhi~qI~~~G~fv 221 (424)
. +.+||.-+ .--+|+|+.+.. |+.+
T Consensus 300 ~~~~~~l~~~~-~dg~i~iwd~~~-~~~~ 326 (397)
T 1sq9_A 300 NDSGETLCSAG-WDGKLRFWDVKT-KERI 326 (397)
T ss_dssp CSSSSEEEEEE-TTSEEEEEETTT-TEEE
T ss_pred CCCCCEEEEEe-CCCeEEEEEcCC-Ccee
Confidence 2 45666655 456899999874 5543
No 130
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=28.92 E-value=3e+02 Score=24.18 Aligned_cols=24 Identities=8% Similarity=-0.165 Sum_probs=19.6
Q ss_pred eeCC-CCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTD-DGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTp-DG~yLIaFS~dq~sL~vYry~ 77 (424)
.|+| ||++|++-+.| ..+.||.+.
T Consensus 200 ~~~~~~~~~l~~~~~d-g~i~i~~~~ 224 (342)
T 1yfq_A 200 ALLPKEQEGYACSSID-GRVAVEFFD 224 (342)
T ss_dssp EECSGGGCEEEEEETT-SEEEEEECC
T ss_pred EECCCCCCEEEEEecC-CcEEEEEEc
Confidence 7999 99988887764 578898886
No 131
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=28.40 E-value=1.2e+02 Score=28.95 Aligned_cols=61 Identities=11% Similarity=0.166 Sum_probs=46.9
Q ss_pred EEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeeceeEEEEEEEccCCeEEEeeeeC
Q 014429 162 TFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIG 227 (424)
Q Consensus 162 tfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~QtIhi~qI~~~G~fv~vrtIG 227 (424)
++..||+++|++..+..+.... .+ .|+.+.++.|-++.-+..++.+|... +++.+..=..|
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~--Fg--eGit~~g~~ly~ltw~~~~v~v~D~~-t~~~~~ti~~~ 126 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRY--FG--EGISDWKDKIVGLTWKNGLGFVWNIR-NLRQVRSFNYD 126 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTC--CE--EEEEEETTEEEEEESSSSEEEEEETT-TCCEEEEEECS
T ss_pred eEEEEECCCCcEEEEEecCCcc--ce--eEEEEeCCEEEEEEeeCCEEEEEECc-cCcEEEEEECC
Confidence 5889999999999988765421 11 48999999999999999999999876 46655444443
No 132
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=27.38 E-value=3.2e+02 Score=24.03 Aligned_cols=158 Identities=16% Similarity=0.029 Sum_probs=0.0
Q ss_pred eCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeee-------------
Q 014429 54 FTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELIC------------- 120 (424)
Q Consensus 54 FTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~------------- 120 (424)
|+|||+ |++.+.....|.+|... .+.-.......-..-+.....+.+.+.|..+-
T Consensus 76 ~~~dg~-l~v~~~~~~~i~~~d~~-----------~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~ 143 (296)
T 3e5z_A 76 LNKQGH-LIACSHGLRRLERQREP-----------GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG 143 (296)
T ss_dssp ECTTCC-EEEEETTTTEEEEECST-----------TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGS
T ss_pred ECCCCc-EEEEecCCCeEEEEcCC-----------CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccc
Q ss_pred ---------eeeeEEecCceEEEEEeeccc-cCCCCCCCCCCcCCCCcceeEEEEEEcc-CceE-eeeeee---------
Q 014429 121 ---------KDFFLSMEGNQFGLFATSTAQ-IHDAPTTGRAIQGVPFIEKITFHLLRLE-DGVV-LDEKVF--------- 179 (424)
Q Consensus 121 ---------refsLft~dgryvivasa~~~-~~~~~~~ne~v~~~P~le~ytfhlVdL~-~G~v-~D~~~f--------- 179 (424)
.....+..+|+...+...... .+.+...++..- +-.-.+-+++++|+. +|.+ ...+.|
T Consensus 144 ~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~ 222 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG 222 (296)
T ss_dssp SCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS
T ss_pred ccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe
Q ss_pred ----ccceEEeeccceeeee---cceeeeeeeceeEEEEEEE-ccCCeEEEeee
Q 014429 180 ----HNDFINLAHNMGVFLY---DDLLAIVSLRYQTIHILQV-RDLGNLVDVRT 225 (424)
Q Consensus 180 ----~~D~I~LsHN~Gv~Ly---~dlLAILS~q~QtIhi~qI-~~~G~fv~vrt 225 (424)
+...|+++.+.||+++ +.++..+.+... +.=... .++|+.+-+-+
T Consensus 223 i~~d~~G~l~v~~~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 223 LRVDAGGLIWASAGDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp EEEBTTSCEEEEETTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEE
T ss_pred EEECCCCCEEEEcCCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEc
No 133
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=27.33 E-value=1.8e+02 Score=31.55 Aligned_cols=92 Identities=11% Similarity=0.126 Sum_probs=0.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeee----------
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKD---------- 122 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~re---------- 122 (424)
.|+|||++|++=|.| ..|.||.-.+...... ..+..+++.-.|.. -.+.+....++..---|
T Consensus 24 afspdg~~lAsgs~D-g~I~lw~~~~~~~~~~----~~~~~~V~~l~fsp---g~~L~S~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 24 AFDFTQNLLAIATVT-GEVHIYGQQQVEVVIK----LEDRSAIKEMRFVK---GIYLVVINAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp EEETTTTEEEEEETT-SEEEEECSTTCEEEEE----CSSCCCEEEEEEET---TTEEEEEETTCEEEEEETTTCSEEEEE
T ss_pred EECCCCCEEEEEeCC-CEEEEEeCCCcEEEEE----cCCCCCEEEEEEcC---CCEEEEEECcCeEEEEECCCCcEEEEE
Q ss_pred -------eeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceE
Q 014429 123 -------FFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVV 173 (424)
Q Consensus 123 -------fsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v 173 (424)
+.-|..+|+++++|+.... +.++|+.+|.+
T Consensus 96 ~~~~~V~~v~~sp~g~~l~sgs~dg~---------------------V~lwd~~~~~~ 132 (902)
T 2oaj_A 96 FVPGKITSIDTDASLDWMLIGLQNGS---------------------MIVYDIDRDQL 132 (902)
T ss_dssp ECSSCEEEEECCTTCSEEEEEETTSC---------------------EEEEETTTTEE
T ss_pred cCCCCEEEEEECCCCCEEEEEcCCCc---------------------EEEEECCCCcc
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=27.28 E-value=3.1e+02 Score=23.85 Aligned_cols=84 Identities=11% Similarity=0.044 Sum_probs=48.4
Q ss_pred eEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeee--cceeee
Q 014429 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLY--DDLLAI 201 (424)
Q Consensus 124 sLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly--~dlLAI 201 (424)
.-|..||+++++++.. +-+++++|+.+|.+..+..+...-.+-.+-.++.+- ++.|++
T Consensus 39 ~~~s~dg~~l~v~~~~--------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 98 (337)
T 1pby_B 39 PMVAPGGRIAYATVNK--------------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAI 98 (337)
T ss_dssp EEECTTSSEEEEEETT--------------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEE
T ss_pred eEEcCCCCEEEEEeCC--------------------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEE
Confidence 4467889888775421 125889999999887765553211111122344443 345666
Q ss_pred eee-----------ceeEEEEEEEccCCeEEEeeeeCC
Q 014429 202 VSL-----------RYQTIHILQVRDLGNLVDVRTIGS 228 (424)
Q Consensus 202 LS~-----------q~QtIhi~qI~~~G~fv~vrtIG~ 228 (424)
.+- ...+|+++.+. +|+.+..-..|.
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~v~d~~-~~~~~~~~~~~~ 135 (337)
T 1pby_B 99 YESPVRLELTHFEVQPTRVALYDAE-TLSRRKAFEAPR 135 (337)
T ss_dssp EEEEEEECSSCEEECCCEEEEEETT-TTEEEEEEECCS
T ss_pred EecccccccccccccCceEEEEECC-CCcEEEEEeCCC
Confidence 542 24788888875 477665544443
No 135
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=25.88 E-value=3.5e+02 Score=23.98 Aligned_cols=73 Identities=5% Similarity=-0.041 Sum_probs=42.2
Q ss_pred eEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeecccee---eee--cce
Q 014429 124 FLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGV---FLY--DDL 198 (424)
Q Consensus 124 sLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv---~Ly--~dl 198 (424)
.-|..||+++++|+. +=++.++|+.+|...-...++ .|+..| ... +++
T Consensus 14 ~~~s~~~~~l~~~~~---------------------d~~v~i~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~ 66 (372)
T 1k8k_C 14 HAWNKDRTQIAICPN---------------------NHEVHIYEKSGNKWVQVHELK------EHNGQVTGVDWAPDSNR 66 (372)
T ss_dssp EEECTTSSEEEEECS---------------------SSEEEEEEEETTEEEEEEEEE------CCSSCEEEEEEETTTTE
T ss_pred EEECCCCCEEEEEeC---------------------CCEEEEEeCCCCcEEeeeeec------CCCCcccEEEEeCCCCE
Confidence 445678888877632 225889999998633233332 233222 222 456
Q ss_pred eeeeeeceeEEEEEEEccCCeEEEeee
Q 014429 199 LAIVSLRYQTIHILQVRDLGNLVDVRT 225 (424)
Q Consensus 199 LAILS~q~QtIhi~qI~~~G~fv~vrt 225 (424)
||.-+ .--+|.++.+. .|+......
T Consensus 67 l~~~~-~dg~i~vwd~~-~~~~~~~~~ 91 (372)
T 1k8k_C 67 IVTCG-TDRNAYVWTLK-GRTWKPTLV 91 (372)
T ss_dssp EEEEE-TTSCEEEEEEE-TTEEEEEEE
T ss_pred EEEEc-CCCeEEEEECC-CCeeeeeEE
Confidence 66555 44678999886 466555443
No 136
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=25.77 E-value=40 Score=30.75 Aligned_cols=25 Identities=16% Similarity=0.078 Sum_probs=20.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|||||++|+.-|.+.....||...
T Consensus 357 ~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 357 SFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eEccCCCeEEEEecCCCCceEEEEE
Confidence 6899999988777666677788775
No 137
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=25.29 E-value=43 Score=30.71 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=18.5
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|||||++|+.-|.......||.+.
T Consensus 357 ~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 357 SFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cCCCCCCEEEEEecCCCceeEEEEE
Confidence 7999999988777555556677664
No 138
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=24.67 E-value=56 Score=29.11 Aligned_cols=25 Identities=16% Similarity=0.379 Sum_probs=19.6
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|+|||++|++-+.|. .|.||+.+
T Consensus 341 ~~~s~~~~~l~s~~~dg-~i~iwd~~ 365 (366)
T 3k26_A 341 TSFSRDSSILIAVCDDA-SIWRWDRL 365 (366)
T ss_dssp EEECTTSSEEEEEETTS-EEEEEEC-
T ss_pred EEeCCCCCeEEEEeCCC-EEEEEEec
Confidence 37999999999888775 68888753
No 139
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=24.58 E-value=5.9e+02 Score=26.19 Aligned_cols=50 Identities=10% Similarity=-0.078 Sum_probs=28.8
Q ss_pred eeEEEEEEccCceEeee--eeeccceEEeeccceeeeecceeeeeeeceeEEEEEEE
Q 014429 160 KITFHLLRLEDGVVLDE--KVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQV 214 (424)
Q Consensus 160 ~ytfhlVdL~~G~v~D~--~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~QtIhi~qI 214 (424)
+..++.+|+.+|...+- .+-..+.+ + ++...++.|++.+...-.-.|+.+
T Consensus 304 ~~~l~~~d~~~~~~~~~~~l~~~~~~~-~----~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 304 NRRLVTVDAANPGPAHWRDLIPERQQV-L----TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCCSSC-E----EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEeCCCCCccccEEEecCCCCE-E----EEEEECCEEEEEEEECCeeEEEEE
Confidence 35788899988854211 22222222 2 677888888777776543333333
No 140
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=24.40 E-value=4.4e+02 Score=24.64 Aligned_cols=117 Identities=15% Similarity=0.196 Sum_probs=0.0
Q ss_pred CCceeeeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEE
Q 014429 47 PDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLS 126 (424)
Q Consensus 47 P~~~lRKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLf 126 (424)
....+..+++||++|++-|.| ..|.||... .-+ ...++. .+.+...+=.|+
T Consensus 118 ~~~v~~~~~~~g~~l~sg~~d-g~i~vwd~~----~~~---------------------~~~~~~-~h~~~v~~~~~~-- 168 (445)
T 2ovr_B 118 DDHVITCLQFCGNRIVSGSDD-NTLKVWSAV----TGK---------------------CLRTLV-GHTGGVWSSQMR-- 168 (445)
T ss_dssp TTSCEEEEEEETTEEEEEETT-SCEEEEETT----TCC---------------------EEEECC-CCSSCEEEEEEE--
T ss_pred CCCcEEEEEEcCCEEEEEECC-CcEEEEECC----CCc---------------------EEEEEc-CCCCCEEEEEec--
Q ss_pred ecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeece
Q 014429 127 MEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRY 206 (424)
Q Consensus 127 t~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~ 206 (424)
+.+++.|+.... +.++|+++|...-+..-+.+.|. .+...++.|+.-|-.
T Consensus 169 ---~~~l~s~~~dg~---------------------i~vwd~~~~~~~~~~~~h~~~v~-----~~~~~~~~l~s~s~d- 218 (445)
T 2ovr_B 169 ---DNIIISGSTDRT---------------------LKVWNAETGECIHTLYGHTSTVR-----CMHLHEKRVVSGSRD- 218 (445)
T ss_dssp ---TTEEEEEETTSC---------------------EEEEETTTTEEEEEECCCSSCEE-----EEEEETTEEEEEETT-
T ss_pred ---CCEEEEEeCCCe---------------------EEEEECCcCcEEEEECCCCCcEE-----EEEecCCEEEEEeCC-
Q ss_pred eEEEEEEEccCCeEEEe
Q 014429 207 QTIHILQVRDLGNLVDV 223 (424)
Q Consensus 207 QtIhi~qI~~~G~fv~v 223 (424)
.+|+++.+. +|+.+..
T Consensus 219 g~i~~wd~~-~~~~~~~ 234 (445)
T 2ovr_B 219 ATLRVWDIE-TGQCLHV 234 (445)
T ss_dssp SEEEEEESS-SCCEEEE
T ss_pred CEEEEEECC-CCcEEEE
No 141
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=24.35 E-value=54 Score=30.73 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=21.3
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecCC
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMWL 79 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g~ 79 (424)
.|+|||++|++=|.| ..|.|+.+.|.
T Consensus 351 ~~s~dg~~l~sgs~D-~~i~iW~~~~~ 376 (380)
T 3iz6_a 351 GLSSDGSALCTGSWD-KNLKIWAFSGH 376 (380)
T ss_dssp EECSSSSEEEEECTT-SCEEEEECCSS
T ss_pred EECCCCCEEEEeeCC-CCEEEEecCCC
Confidence 699999999887776 46999998753
No 142
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=23.98 E-value=5.8e+02 Score=25.85 Aligned_cols=25 Identities=12% Similarity=0.200 Sum_probs=17.3
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeec
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
.|+||+..+|+-......|.||+..
T Consensus 389 ~~~~~~~~~l~s~s~D~~i~~W~~~ 413 (694)
T 3dm0_A 389 ATPIDNADIIVSASRDKSIILWKLT 413 (694)
T ss_dssp ECCTTCCSEEEEEETTSEEEEEECC
T ss_pred EecCCCCCEEEEEeCCCcEEEEEcc
Confidence 5888875544444455789999876
No 143
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=23.72 E-value=39 Score=35.53 Aligned_cols=25 Identities=8% Similarity=0.214 Sum_probs=21.1
Q ss_pred eeCCCCCeEEEeeCCCceEEEEeecC
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYRPMW 78 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYry~g 78 (424)
.|+|||++|++-+.|. .|.||+...
T Consensus 261 ~~spdg~~l~s~s~Dg-~I~vwd~~~ 285 (753)
T 3jro_A 261 SWSLSGNVLALSGGDN-KVTLWKENL 285 (753)
T ss_dssp EECTTTCCEEEECSSS-CEECCBCCS
T ss_pred EEcCCCCEEEEEcCCC-EEEEEecCC
Confidence 7999999999888765 599999873
No 144
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=23.34 E-value=1e+02 Score=26.55 Aligned_cols=65 Identities=17% Similarity=0.253 Sum_probs=42.7
Q ss_pred CcceeEEEEEEccCceEeeeeeeccceEEe--eccceeeeecceeeeeee----------ceeEEEEEEEc-cCCeEEEe
Q 014429 157 FIEKITFHLLRLEDGVVLDEKVFHNDFINL--AHNMGVFLYDDLLAIVSL----------RYQTIHILQVR-DLGNLVDV 223 (424)
Q Consensus 157 ~le~ytfhlVdL~~G~v~D~~~f~~D~I~L--sHN~Gv~Ly~dlLAILS~----------q~QtIhi~qI~-~~G~fv~v 223 (424)
.++.-+||.|+..||..||- .++.|-+.- .++ |-...|..+-|.=- -..++++|||. ++|.-+.+
T Consensus 29 ~~~~~~~y~V~F~DgS~s~d-l~PedIvs~dc~~~-GpP~~G~~V~V~W~DG~~y~a~f~g~~~~~~YtV~FeDgs~~~~ 106 (123)
T 2xdp_A 29 AVTSQTFYEVMFDDGSFSRD-TFPEDIVSRDCLKL-GPPAEGEVVQVKWPDGKLYGAKYFGSNIAHMYQVEFEDGSQIAM 106 (123)
T ss_dssp EEEEEEEEEEEETTSCEEEE-ECGGGBCSSCHHHH-CCCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEECTTSCEEEE
T ss_pred EEeeEEEEEEEcCCCCccCC-CCHhHccccccccc-CCCCCCCEEEEEcCCCCEEeEEEeeeeeEEEEEEEECCCCeEEe
Confidence 46788999999999999995 344442211 122 66666666666543 34578889984 67764444
No 145
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=22.71 E-value=2.3e+02 Score=30.18 Aligned_cols=119 Identities=14% Similarity=-0.002 Sum_probs=70.3
Q ss_pred cchhhhhheeeEEEcCCCCeeeeeeeeEEecCceEEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeee
Q 014429 98 KRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEK 177 (424)
Q Consensus 98 ~~F~~fF~~~~~~~la~~~e~L~refsLft~dgryvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~ 177 (424)
..++..-+..+.+.++.+-...+-||-. +++|..+|++...... ..++. ....+++ .|.-|| .+|.|+.+-
T Consensus 229 ~elD~~Gkvv~~~~lp~g~~~~HHD~~~-l~nGn~Lv~v~~~d~~----~~dG~--~~~~vdD-~I~EVD-~tGeVv~eW 299 (571)
T 3elq_A 229 YEFDMMGQVLEDHKLPRGFADATHESIE-TPNGTVLLRVGKSNYR----RDDGV--HVTTIRD-HILEVD-KSGRVVDVW 299 (571)
T ss_dssp EEECTTCCEEEEEECCTTEECBCSCEEE-CTTSCEEEEEEETTEE----CTTSC--EECCCSC-EEEEEC-TTSCEEEEE
T ss_pred EEECCCCcEEEEEECCCCccccccceEE-cCCCcEEEEEeccccc----CCCCc--ccceecc-EEEEEC-CCCCEEEEE
Confidence 4566666667777776544456677554 8899999886432111 11111 1123566 588999 999988765
Q ss_pred eeccc----------------------------------------------eEEeeccceeeeec-ceeeeeeeceeEEE
Q 014429 178 VFHND----------------------------------------------FINLAHNMGVFLYD-DLLAIVSLRYQTIH 210 (424)
Q Consensus 178 ~f~~D----------------------------------------------~I~LsHN~Gv~Ly~-dlLAILS~q~QtIh 210 (424)
.+..= --.+.|...|..-. |=-.|+|.|||+
T Consensus 300 ~~~dhld~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~d~~dd~~liSsR~~~-- 377 (571)
T 3elq_A 300 DLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQG-- 377 (571)
T ss_dssp EHHHHSCTTCCTTGGGSBTTC-------CCCSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEEEETTTE--
T ss_pred EhHHccCcccccchhccccccccccccccccccccccccccccccccccCCCCCCcEecceeEcCCCCEEEEECCccE--
Confidence 53110 01334555665332 335789999995
Q ss_pred EEEEccCCeEEEeeeeCCc
Q 014429 211 ILQVRDLGNLVDVRTIGSF 229 (424)
Q Consensus 211 i~qI~~~G~fv~vrtIG~f 229 (424)
|+.|..+|+.+- .+|..
T Consensus 378 I~~Id~tG~V~W--~LGg~ 394 (571)
T 3elq_A 378 VVKIGRDKQVKW--ILAPS 394 (571)
T ss_dssp EEEEETTSCEEE--EESCS
T ss_pred EEEEcCCCcEEE--EECCC
Confidence 566766786433 45654
No 146
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=22.56 E-value=50 Score=31.29 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=0.0
Q ss_pred eeCCCCCeEEEeeCCCceEEEEe
Q 014429 53 KFTDDGQYLISFSRNHQDLIVYR 75 (424)
Q Consensus 53 KFTpDG~yLIaFS~dq~sL~vYr 75 (424)
.|||||++|++=|.|.+ |.|++
T Consensus 371 ~~spdg~~l~S~s~D~t-vriWd 392 (420)
T 4gga_A 371 TMSPDGATVASAAADET-LRLWR 392 (420)
T ss_dssp EECTTSSCEEEEETTTE-EEEEC
T ss_pred EEcCCCCEEEEEecCCe-EEEEE
No 147
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=22.04 E-value=54 Score=35.09 Aligned_cols=26 Identities=12% Similarity=0.056 Sum_probs=24.3
Q ss_pred eeeCCCCCeEEEeeCCCceEEEEeec
Q 014429 52 RKFTDDGQYLISFSRNHQDLIVYRPM 77 (424)
Q Consensus 52 RKFTpDG~yLIaFS~dq~sL~vYry~ 77 (424)
-.|||||+|+++=+.....+-||++.
T Consensus 282 v~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 282 CNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp EEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred EEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 46999999999999999999999997
No 148
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=21.25 E-value=4.6e+02 Score=23.71 Aligned_cols=29 Identities=10% Similarity=0.010 Sum_probs=20.7
Q ss_pred ceeeeeCCCC-CeEEEeeCCCceEEEEeecC
Q 014429 49 HSFRKFTDDG-QYLISFSRNHQDLIVYRPMW 78 (424)
Q Consensus 49 ~~lRKFTpDG-~yLIaFS~dq~sL~vYry~g 78 (424)
..--.|+||| ++|++=|. ...|.||....
T Consensus 76 v~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~ 105 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSK-GGDIILWDYDV 105 (383)
T ss_dssp EEEEEECSSCTTEEEEEEB-TSCEEEEETTS
T ss_pred EEEEEECCCCCCEEEEEcC-CCeEEEEeCCC
Confidence 3344799999 66666555 56799998873
Done!