Your job contains 1 sequence.
>014433
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL
FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGDES
AKAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014433
(424 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 2111 1.5e-218 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 1511 5.6e-155 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 1511 5.6e-155 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 1511 5.6e-155 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 1511 5.6e-155 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 1511 5.6e-155 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 1511 5.6e-155 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 1511 5.6e-155 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 1510 7.2e-155 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 1506 1.9e-154 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 1506 1.9e-154 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 1503 4.0e-154 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 1502 5.1e-154 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 1491 7.4e-153 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 1487 2.0e-152 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 1485 3.2e-152 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 1482 6.7e-152 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 1481 8.5e-152 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 1479 1.4e-151 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 1479 1.4e-151 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 1479 1.4e-151 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 1478 1.8e-151 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 1475 3.7e-151 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 1475 3.7e-151 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 1475 3.7e-151 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 1475 3.7e-151 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 1475 3.7e-151 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 1462 8.8e-150 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 1447 3.4e-148 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 1423 1.2e-145 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 1420 2.5e-145 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 1419 3.2e-145 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 1399 4.2e-143 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 1385 1.3e-141 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 1342 4.6e-137 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 1342 4.6e-137 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 1171 6.0e-119 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 1169 9.8e-119 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 1020 6.0e-103 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 1007 1.4e-101 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 792 8.7e-79 1
UNIPROTKB|K7GKX8 - symbol:LOC100519001 "Uncharacterized p... 732 2.0e-72 1
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 521 3.7e-66 2
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 521 3.7e-66 2
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 661 6.7e-65 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 659 1.1e-64 1
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 645 3.3e-63 1
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 636 3.0e-62 1
GENEDB_PFALCIPARUM|PF14_0314 - symbol:PF14_0314 "chromati... 613 8.1e-60 1
UNIPROTKB|Q8ILD0 - symbol:PF14_0314 "Chromatin assembly f... 613 8.1e-60 1
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 585 7.5e-57 1
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 585 7.5e-57 1
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 348 3.2e-56 2
POMBASE|SPAC25H1.06 - symbol:pcf3 "CAF assembly factor (C... 524 2.2e-50 1
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 372 6.0e-50 2
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 372 6.0e-50 2
GENEDB_PFALCIPARUM|PF13_0149 - symbol:PF13_0149 "chromati... 327 2.1e-48 2
UNIPROTKB|Q8IE52 - symbol:PF13_0149 "Chromatin assembly f... 327 2.1e-48 2
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 471 9.1e-45 1
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 405 8.9e-38 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 378 6.5e-35 1
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 370 4.6e-34 1
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 352 3.7e-32 1
UNIPROTKB|Q5JNZ6 - symbol:RBBP7 "Histone-binding protein ... 328 1.3e-29 1
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 327 3.6e-29 1
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 327 3.6e-29 1
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 316 5.9e-28 1
UNIPROTKB|C9JPP3 - symbol:RBBP4 "Histone-binding protein ... 292 8.4e-26 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 299 2.7e-25 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 287 1.3e-23 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 272 1.2e-21 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 270 2.1e-21 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 265 8.5e-21 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 264 1.2e-20 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 263 1.7e-20 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 242 4.3e-20 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 260 5.3e-20 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 258 6.2e-20 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 257 7.6e-20 1
UNIPROTKB|E9PND5 - symbol:RBBP4 "Histone-binding protein ... 235 2.6e-19 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 237 9.5e-18 2
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 226 3.7e-17 1
UNIPROTKB|C9J7L0 - symbol:RBBP7 "Histone-binding protein ... 215 4.4e-17 1
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 216 8.3e-16 2
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 209 6.4e-15 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 208 1.1e-14 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 207 1.2e-14 1
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 215 1.4e-14 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 206 1.9e-14 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 205 2.3e-14 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 205 2.6e-14 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 199 1.2e-13 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 199 1.2e-13 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 206 1.8e-13 1
TAIR|locus:2059359 - symbol:COP1 "CONSTITUTIVE PHOTOMORPH... 200 8.1e-13 1
FB|FBgn0046222 - symbol:CG1109 species:7227 "Drosophila m... 198 1.8e-12 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 196 2.2e-12 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 189 2.6e-12 1
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 194 3.7e-12 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 194 3.7e-12 1
WARNING: Descriptions of 909 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 2111 (748.2 bits), Expect = 1.5e-218, P = 1.5e-218
Identities = 384/424 (90%), Positives = 402/424 (94%)
Query: 1 MGKDXXXXXXXXXXRLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD 60
MGKD RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEP GKD
Sbjct: 1 MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD 60
Query: 61 YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120
YSVQKMILGTHTSE+EPNYLMLAQVQLPLDD+E++AR YDDDRS+FGGFGCA GKVQIIQ
Sbjct: 61 YSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQ 120
Query: 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE 180
QINHDGEVNRARYMPQNPF+IATKTV+AEVYVFDYSKHPSKPPLDGAC+PDL+LRGHS+E
Sbjct: 121 QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE 180
Query: 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE 240
GYGLSWSKFK+GHLLSGSDDAQICLWDINA PKNKSL+A QIFK HEGVVEDVAWHLRHE
Sbjct: 181 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHE 240
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
YLFGSVGDDQYLLIWDLR+PS SKPVQSVVAH EVNCLAFNPFNEW++ATGSTDKTVKL
Sbjct: 241 YLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKL 300
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
FDLRK+STALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT EDAE
Sbjct: 301 FDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAE 360
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGDES 420
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDD PG+E
Sbjct: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDAPGEEP 420
Query: 421 AKAS 424
+KAS
Sbjct: 421 SKAS 424
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 274/400 (68%), Positives = 328/400 (82%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 274/400 (68%), Positives = 328/400 (82%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 274/400 (68%), Positives = 328/400 (82%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 274/400 (68%), Positives = 328/400 (82%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 277/407 (68%), Positives = 331/407 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+VQ+P DD++ DA HYD ++ +FGGFG +GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT SA+V VFDY+KHPSKP G CSPDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDI+A PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 253 IWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 312
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED-DLPGDE 419
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+ D+P E
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIPASE 419
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 274/400 (68%), Positives = 328/400 (82%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 274/400 (68%), Positives = 328/400 (82%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 1510 (536.6 bits), Expect = 7.2e-155, P = 7.2e-155
Identities = 276/407 (67%), Positives = 331/407 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+VQ+P DD++ DA HYD ++ +FGGFG +GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT SA+V VFDY+KHPSKP G CSPDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDI+A PK K ++A +F H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 253 IWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 312
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED-DLPGDE 419
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+ D+P E
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIPASE 419
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 1506 (535.2 bits), Expect = 1.9e-154, P = 1.9e-154
Identities = 276/412 (66%), Positives = 333/412 (80%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPG-DESAKAS 424
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED G D ++S
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTEGGVDPEGQSS 425
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 1506 (535.2 bits), Expect = 1.9e-154, P = 1.9e-154
Identities = 273/400 (68%), Positives = 328/400 (82%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEE+KIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 1503 (534.1 bits), Expect = 4.0e-154, P = 4.0e-154
Identities = 273/400 (68%), Positives = 327/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S +V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G+L
Sbjct: 134 PQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 1502 (533.8 bits), Expect = 5.1e-154, P = 5.1e-154
Identities = 273/400 (68%), Positives = 327/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENI +DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENINNDED 413
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
Identities = 271/400 (67%), Positives = 326/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+SV +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT +++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G L
Sbjct: 134 PQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+ PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP +V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 1487 (528.5 bits), Expect = 2.0e-152, P = 2.0e-152
Identities = 273/412 (66%), Positives = 330/412 (80%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WL D P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +I HDGEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT +++V VFDY+KHPSKP G C+P+LRLRGH EGYGLSW+ G+L
Sbjct: 134 PQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPG-DESAKAS 424
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED G D + S
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTEGGVDPEGQGS 425
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
Identities = 273/408 (66%), Positives = 329/408 (80%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY V +++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDR-SDFGGFGCANGKVQIIQQINHDGEVNRARY 133
E N+L++A Q+P DD++ DA HYD ++ ++FGGFG +GK++I +INH+GEVNRARY
Sbjct: 74 -EQNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 134 MPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193
MPQNP +IATKT +++V FDY+KHPSKP G CSPDLRLRGH EGYGLSW+ G+
Sbjct: 133 MPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGN 192
Query: 194 LLSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
LLS SDD ICLWDI+ APK K ++A IF H VVEDV+WHL HE LFGSV DDQ L
Sbjct: 193 LLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT 312
+IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 312
Query: 313 FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG 372
F+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGG
Sbjct: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 372
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED-DLPGDE 419
HT+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DE+ D P E
Sbjct: 373 HTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE 420
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 1482 (526.7 bits), Expect = 6.7e-152, P = 6.7e-152
Identities = 270/407 (66%), Positives = 328/407 (80%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD + GKDYSV ++ILGTHTS+
Sbjct: 19 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD 78
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP +D++ D HYD+++ +FGGFG GK++I +INH+GEVNRARYM
Sbjct: 79 -EQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYM 137
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQN +IATKT S++V VFDY+KHPSKP G C PDLRLRGH EGYGLSW+ G+L
Sbjct: 138 PQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYL 197
Query: 195 LSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDINA PK ++ ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM 257
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R + SKP +V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 258 IWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 317
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 318 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 377
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED-DLPGDE 419
T+KISDFSWNP E W+I SV+EDNI+Q+WQMAEN+Y+DE+ ++P E
Sbjct: 378 TAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASE 424
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 1481 (526.4 bits), Expect = 8.5e-152, P = 8.5e-152
Identities = 271/407 (66%), Positives = 327/407 (80%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED-DLPGDE 419
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+ D+ E
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
Identities = 269/400 (67%), Positives = 324/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
Identities = 269/400 (67%), Positives = 324/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
Identities = 269/400 (67%), Positives = 324/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 1478 (525.3 bits), Expect = 1.8e-151, P = 1.8e-151
Identities = 272/407 (66%), Positives = 328/407 (80%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+I+EEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++ ++LGTHTS+
Sbjct: 14 RVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+VQ+P DD + D YD ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYM 131
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP++IATKT SA+V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ +GHL
Sbjct: 132 PQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHL 191
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDI+A PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 192 LSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 251
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 252 IWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 311
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 312 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 371
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED-DLPGDE 419
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+ D+ E
Sbjct: 372 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
Identities = 268/400 (67%), Positives = 324/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
Identities = 268/400 (67%), Positives = 324/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
Identities = 268/400 (67%), Positives = 324/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 58 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 117
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 118 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 176
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 177 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 236
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 237 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 296
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 297 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 356
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 357 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 416
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 417 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 456
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
Identities = 268/400 (67%), Positives = 324/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
Identities = 268/400 (67%), Positives = 324/400 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 58 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 117
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 118 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 176
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 177 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 236
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 237 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 296
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 297 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 356
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 357 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 416
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 417 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 456
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 1462 (519.7 bits), Expect = 8.8e-150, P = 8.8e-150
Identities = 267/401 (66%), Positives = 323/401 (80%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S+ V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A +F H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
+WD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 253 MWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
Query: 314 DSHKEEVFQV-GWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG 372
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGG
Sbjct: 313 ESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 372
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
HT+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 373 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 413
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 1447 (514.4 bits), Expect = 3.4e-148, P = 3.4e-148
Identities = 263/400 (65%), Positives = 323/400 (80%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWK NTPFLYDLV+THALEWPSLT +WLPD P GKD+ + +++LGTHTS+
Sbjct: 15 RVINEEYKIWK-NTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFGIHRLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
+ ++L++A VQLP DD++ DA +YD ++ +FGGFG +GK++I +IN++GEVNRARYM
Sbjct: 74 EQNHHLVIASVQLPNDDAQFDASYYDSEKGEFGGFGSVSGKIEIEIKINYEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+ DL LRGH EGYGLSW+ + G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRGHQKEGYGLSWNPYLSGYL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K + A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP SV A+ +EVNCL+FNP +E+ILA+GS DKTV L+DLR + LH+F
Sbjct: 254 IWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSF 313
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 1423 (506.0 bits), Expect = 1.2e-145, P = 1.2e-145
Identities = 264/400 (66%), Positives = 318/400 (79%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKG---------GKIECEIKINHEGEVNRARYM 123
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 124 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 183
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 184 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 243
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 244 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 303
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 304 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 363
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 364 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 403
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 1420 (504.9 bits), Expect = 2.5e-145, P = 2.5e-145
Identities = 262/411 (63%), Positives = 324/411 (78%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
++INEEYKIWK++TPFLYD+VITHALEWPSLTV WLP + P K YS++K+ILGTHTS+
Sbjct: 11 KVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEKVILGTHTSD 70
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E NYLM+A+V LP+D++ ++ YDD + + GG G + K++IIQ+INH+GEVNRAR M
Sbjct: 71 EEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHEGEVNRARVM 130
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQN +IATKTVS+EVY+FD +KHP +P DG CSP+L+L GH EGYG+SW+ KEGHL
Sbjct: 131 PQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGHL 190
Query: 195 LSGSDDAQICLWDINAAPKNKS-LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD IC+WDI+AA K+ S L+A+ I+ H +VEDVAWH H+ FGSVGDD+ L+
Sbjct: 191 LSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLM 250
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD RT + KP+ V AH SEVNCL+FNPF E+++ATGSTDKTV L+D+R + LH+
Sbjct: 251 IWDTRTGT--KPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHSL 308
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
SH +EVFQV ++P NET+LASC RR+ VWDLSRI EEQ EDA DGPPELLFIHGGH
Sbjct: 309 ISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGH 368
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHD-EDDLPGDESAKA 423
TSKISDFSWNP + W I+SVAEDNILQIWQMAENIY+D EDDL + A
Sbjct: 369 TSKISDFSWNPNDPWSIASVAEDNILQIWQMAENIYNDREDDLENSKVTNA 419
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 1419 (504.6 bits), Expect = 3.2e-145, P = 3.2e-145
Identities = 263/400 (65%), Positives = 318/400 (79%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSEKG---------GKIECEIKINHEGEVNRARYM 123
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 124 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 183
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 184 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 243
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD R+ + SKP V AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LHTF
Sbjct: 244 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 303
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGH
Sbjct: 304 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 363
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
T+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 364 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 403
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 254/379 (67%), Positives = 307/379 (81%)
Query: 36 ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95
+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ D
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFD 59
Query: 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDY 155
A HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY
Sbjct: 60 ASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDY 119
Query: 156 SKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN- 214
+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK
Sbjct: 120 TKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEG 179
Query: 215 KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274
K ++A IF H VVEDV+WHL HE LFGSV DDQ L+IWD R+ + SKP SV AH +
Sbjct: 180 KVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA 239
Query: 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILA 334
EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+F+SHK+E+FQV W+P NETILA
Sbjct: 240 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA 299
Query: 335 SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394
S RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGGHT+KISDFSWNP E WVI SV+
Sbjct: 300 SSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 359
Query: 395 EDNILQIWQMAENIYHDED 413
EDNI+Q+WQMAENIY+DED
Sbjct: 360 EDNIMQVWQMAENIYNDED 378
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 255/406 (62%), Positives = 326/406 (80%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLP+ E+ D++V ++ILGTHTS+
Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKE-SSDHTVHRLILGTHTSD 70
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L+++++ +P D+++ DA YD +R +FGGFG NGKV+ +INH+GEVNRARYM
Sbjct: 71 -EQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYM 129
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ P +IATK+ SA+VY+FDY+K+PS P D +P L+L+GH+ EGYGLSW+ KEG +
Sbjct: 130 PQKPTIIATKSPSADVYIFDYTKYPSVPK-DNTFNPLLKLKGHTKEGYGLSWNPNKEGLI 188
Query: 195 LSGSDDAQICLWDINA-APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +C WDIN A N L+A +IFK HE VVEDVAWH+ H+ +FGSVGDD+ LL
Sbjct: 189 LSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLL 248
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWDLRT + P ++ AH +EVNCLAFNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 249 IWDLRT---NVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLKLHSF 305
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SH++E+FQV W+P NETILAS +RL VWDLS+I E+QT EDAEDGPPELLFIHGGH
Sbjct: 306 ESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGH 365
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHD-EDDLPGD 418
T+KISDFSWNP E WV+ SV+EDNILQ+WQMA+NIY+D ED+ P D
Sbjct: 366 TAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNDVEDETPAD 411
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
Identities = 248/406 (61%), Positives = 318/406 (78%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLPD + D+++ ++ILGTHTS+
Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKD-NSDHTIHRLILGTHTSD 70
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L+++++ +P DD++ DA YD +RS++GGFG NGKV+ +INH+GEVNRARYM
Sbjct: 71 -EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYM 129
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ +IATK+ A+VY+FDY KH S P D +P +RL+GH+ EGYGLSW+ KEG +
Sbjct: 130 PQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLI 188
Query: 195 LSGSDDAQICLWDINAAPKNKS-LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +C WDINA L+A +FK HE VVEDVAWH+ H+ +FGSVGDD+ LL
Sbjct: 189 LSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLL 248
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD+RT S P + AH +EVNCLAFNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 249 IWDVRT---STPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSF 305
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SH++E+FQV W+P NETILAS +RL VWDLS+I E+Q+ EDAEDGPPELLFIHGGH
Sbjct: 306 ESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGH 365
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDD-LPGD 418
T+KISDFSWNP E WV+ SV+EDNILQ+WQMA+NIY++ D+ P D
Sbjct: 366 TAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPAD 411
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
Identities = 248/406 (61%), Positives = 318/406 (78%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLPD + D+++ ++ILGTHTS+
Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKD-NSDHTIHRLILGTHTSD 70
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L+++++ +P DD++ DA YD +RS++GGFG NGKV+ +INH+GEVNRARYM
Sbjct: 71 -EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYM 129
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ +IATK+ A+VY+FDY KH S P D +P +RL+GH+ EGYGLSW+ KEG +
Sbjct: 130 PQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLI 188
Query: 195 LSGSDDAQICLWDINAAPKNKS-LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +C WDINA L+A +FK HE VVEDVAWH+ H+ +FGSVGDD+ LL
Sbjct: 189 LSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLL 248
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWD+RT S P + AH +EVNCLAFNP++E+ILATGS DKTV L+DLR + LH+F
Sbjct: 249 IWDVRT---STPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSF 305
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+SH++E+FQV W+P NETILAS +RL VWDLS+I E+Q+ EDAEDGPPELLFIHGGH
Sbjct: 306 ESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGH 365
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDD-LPGD 418
T+KISDFSWNP E WV+ SV+EDNILQ+WQMA+NIY++ D+ P D
Sbjct: 366 TAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPAD 411
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 226/402 (56%), Positives = 285/402 (70%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSE 74
+ E++ +WKKNTPFLYDL+I+H LEWPSLTV W+P P D + V K+ILGTHTS
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
+ ++LM+A V P ++E + D F KV+I Q+I DGEVNRAR M
Sbjct: 74 SAQDFLMVADVVTPTPNAEPGIGGANQD--PF------IPKVEIRQRIRVDGEVNRARCM 125
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ P L+ KT EV++FDY+KH +K C PDLRL GH EGYGLSWS FKEG+L
Sbjct: 126 PQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVGHDKEGYGLSWSPFKEGYL 184
Query: 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254
LSGS D +ICLWD++A P++K L AM +++ HE + DV+WH+++E LFGS G+D L+I
Sbjct: 185 LSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVI 244
Query: 255 WDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD 314
WD RT + V+ H+ EVN L+FNPFNEW+LAT S+D TV LFDLRK++ LH
Sbjct: 245 WDTRTNQMQHQVK---VHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMS 301
Query: 315 SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTP-E-DAEDGPPELLFIHGG 372
SH+ EVFQV W+P +ET+LAS RRLMVWDL+R+ EEQ E DAEDGPPELLF HGG
Sbjct: 302 SHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGG 361
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDD 414
H +KISDF+WN E WVI+SVAEDN LQ+WQMAE+IY DE+D
Sbjct: 362 HKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEED 403
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 221/407 (54%), Positives = 287/407 (70%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSE 74
+ EE+ IWK+NTPFLYDL+I+H LEWPSLT+ W+P P KD ++V K+ILGTHTS
Sbjct: 15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
++LM+A V +P D+E D + KV+I Q+I DGEVNRAR M
Sbjct: 75 GAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEIKQKIRVDGEVNRARCM 126
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ P L+ KT +EV++FDY++ KP C PDLRL GH EGYGL+WS FKEG+L
Sbjct: 127 PQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHEQEGYGLAWSSFKEGYL 185
Query: 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254
LSGS D +ICLWD++A +K L M +++ H+ ++EDVAWH+++E +FGS GDD L+I
Sbjct: 186 LSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVI 245
Query: 255 WDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD 314
WDLRT + V+ H+ E+N L+FNPFNEW+LAT S+D TV LFDLRK++ LH
Sbjct: 246 WDLRTNQMQHQVK---VHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLS 302
Query: 315 SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTP-E-DAEDGPPELLFIHGG 372
H+ EVFQV W+P +ET+LAS RRLMVWD++R+ +EQ E DAEDGPPELLF HGG
Sbjct: 303 KHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGG 362
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGDE 419
H +KISDF+WN E WVISSVAEDN LQ+WQMAE+IY ++D+ D+
Sbjct: 363 HKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDD 409
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 189/399 (47%), Positives = 264/399 (66%)
Query: 18 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEP 77
++E++IWKKN P+LYD V+T +EWPSL+V+W+PD + D S+ +MI GTHT
Sbjct: 11 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQ 70
Query: 78 NYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG-KVQIIQQINHDGEVNRARYMPQ 136
N+LM+++ + D E D +D +R +FGG+G + K +INH GEV+RARYMP
Sbjct: 71 NHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPH 130
Query: 137 NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196
NPF+IA++ S +VY+FDY+KHPS+P D P LRL+GH EGYG+SWS +EGHLL+
Sbjct: 131 NPFIIASRGPSDDVYIFDYTKHPSEPK-DTKFRPQLRLKGHEGEGYGMSWSNTREGHLLT 189
Query: 197 GSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255
DD IC WDINA + + FK H EDV++H H ++FGSVGDD+ L +W
Sbjct: 190 AGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLW 249
Query: 256 DLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS 315
DLR SKP + V H +EVNC+ FNPF+E+ILATGS DKTV L+D+R + ++T
Sbjct: 250 DLRQ---SKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKH 306
Query: 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG--PPELLFIHGGH 373
H +E+FQV ++P ET+LAS R++VWD+S+I + + A PPE++FIH GH
Sbjct: 307 HNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGH 366
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDE 412
T K++DFSWNP W I S E N LQ+W+++ ++ E
Sbjct: 367 TGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVSSE 405
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 195/401 (48%), Positives = 263/401 (65%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
+ I EEYK+WK+N PFLYDLVITHALEWPSLT++WLPD++ PG DYS+Q++ILGTHTS
Sbjct: 24 KTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSIQRLILGTHTSG 83
Query: 75 NEPNYLMLAQVQLP-LDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARY 133
N+ NYL +A VQLP D+ + R+ G + ++I Q+I HDG+VNRARY
Sbjct: 84 NDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATG----SYTIEISQKIPHDGDVNRARY 139
Query: 134 MPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193
MPQ P +IAT Y+FD + H + G P L+GH+ EG+GL W+ G+
Sbjct: 140 MPQKPEIIATMGEGGNAYIFDTTCHDALTT--GEALPQAVLKGHTAEGFGLCWNPNLPGN 197
Query: 194 LLSGSDDAQICLWDINA----APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
L +G++D ICLWD+ + + K + + + H +V DV +H +HE L SV DD
Sbjct: 198 LATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDD 257
Query: 250 QYLLIWDLR-TPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST 308
L I D R P P + + AH +N +A NPFN+++LAT S DKTV L+DLR
Sbjct: 258 CTLQIHDTRLNPEEEAP-KVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQ 316
Query: 309 ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLF 368
LHT + H++EV+ + W+P +E ILAS RR+ +WDL +I EEQTPEDAEDG PELLF
Sbjct: 317 RLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLF 376
Query: 369 IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409
+HGGHT++IS+FSW P E WV+ S+A+DNILQIW + I+
Sbjct: 377 MHGGHTNRISEFSWCPNERWVVGSLADDNILQIWSPSRVIW 417
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 171/416 (41%), Positives = 243/416 (58%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
+ INEEYKIWKKN+PFLYDL+IT ALEWP ++++W P+++ Y+ QKM LG
Sbjct: 24 KCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQQIFAEHGYTEQKMFLGVRADV 83
Query: 75 NEPNYLM-LAQVQLP-LDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRAR 132
+ YL+ +A +QLP L+ + D +V I +H V A+
Sbjct: 84 GK--YLLAVASIQLPYLNQTVPPTTMEGASAGDESSL-----RVNISNLYSHPESVCSAK 136
Query: 133 YMPQNPFLIATK-TVSAEVYVFDYSKHPS-KPPLDGACSPDLRLRGHSTEGYGLSWSKFK 190
MPQ+ +AT +V VFD S + P RL H+ + W+
Sbjct: 137 LMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLS 196
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDD 249
+G L+SGS DA + WD+NA ++ S +++ HE V DV +H +H+ L SV D
Sbjct: 197 KGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYD 256
Query: 250 QYLLIWDLRTPSVS-KPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST 308
QYL + D+R P S KP +SV AH ++ +AFNP N++ILAT STDKT+ L+DLR ++
Sbjct: 257 QYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQ 316
Query: 309 ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLF 368
LHT + H++ V ++ ++P E ILAS RR +VWDLSRI E+Q E+A+DGPPELLF
Sbjct: 317 RLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELLF 376
Query: 369 IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGDESAKAS 424
+HGGHTS D W P +W +++ AEDNILQIW + +I+ +E L D +A S
Sbjct: 377 MHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIWTPSRSIWGNEQ-LEEDATAYLS 431
>UNIPROTKB|K7GKX8 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 EMBL:CU463287
Ensembl:ENSSSCT00000032853 Uniprot:K7GKX8
Length = 254
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 128/198 (64%), Positives = 161/198 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 58 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 117
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 118 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 176
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 177 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 236
Query: 195 LSGSDDAQICLWDINAAP 212
LS SDD +CLWDINA P
Sbjct: 237 LSASDDHTVCLWDINAGP 254
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 521 (188.5 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 113/306 (36%), Positives = 180/306 (58%)
Query: 112 ANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171
AN K++ +Q++ ++ E+ RARYMPQ+ ++AT EV +++ +P
Sbjct: 87 ANSKIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTETRYSHF----AP- 141
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
H+ GYGLSW+ ++G L++G+DD +C+ D NK+ I K +V
Sbjct: 142 -----HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTT---NKTTFKSDIQK---DIVN 190
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILA 290
DV WH + LF SV +D ++ ++D R +K V A S +N LAF+PF E ++A
Sbjct: 191 DVKWHQFNGNLFASVSEDSHVYLFDARD---NKVVSQYYAESSNGINSLAFSPFAENLVA 247
Query: 291 TGSTDKTVKLFDLRKI---STALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
G+T + L DLRK+ S LHT H E + + ++P ++ ILA+ RR+++WDL
Sbjct: 248 IGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDL 307
Query: 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
++ EEQ EDAEDG PEL +H GHT+ +SD SW P +DW+I SVA+DNI+ +W++++
Sbjct: 308 FKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEISKK 367
Query: 408 IYHDED 413
+ +E+
Sbjct: 368 LITNEE 373
Score = 170 (64.9 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
I EEY++W+KN ++Y+ V AL WPSLT++WLP+ G + K++LGTHTS
Sbjct: 11 IKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNGLIDA--KLLLGTHTSNQS 68
Query: 77 PNYLMLAQVQLPLD 90
N L +A QL D
Sbjct: 69 ANQLKVASTQLSAD 82
Score = 52 (23.4 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGD 418
HT SWNP + ++ + A+DN + + N + D+ D
Sbjct: 142 HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNKTTFKSDIQKD 187
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 521 (188.5 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 113/306 (36%), Positives = 180/306 (58%)
Query: 112 ANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171
AN K++ +Q++ ++ E+ RARYMPQ+ ++AT EV +++ +P
Sbjct: 87 ANSKIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTETRYSHF----AP- 141
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
H+ GYGLSW+ ++G L++G+DD +C+ D NK+ I K +V
Sbjct: 142 -----HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTT---NKTTFKSDIQK---DIVN 190
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILA 290
DV WH + LF SV +D ++ ++D R +K V A S +N LAF+PF E ++A
Sbjct: 191 DVKWHQFNGNLFASVSEDSHVYLFDARD---NKVVSQYYAESSNGINSLAFSPFAENLVA 247
Query: 291 TGSTDKTVKLFDLRKI---STALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
G+T + L DLRK+ S LHT H E + + ++P ++ ILA+ RR+++WDL
Sbjct: 248 IGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDL 307
Query: 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
++ EEQ EDAEDG PEL +H GHT+ +SD SW P +DW+I SVA+DNI+ +W++++
Sbjct: 308 FKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEISKK 367
Query: 408 IYHDED 413
+ +E+
Sbjct: 368 LITNEE 373
Score = 170 (64.9 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
I EEY++W+KN ++Y+ V AL WPSLT++WLP+ G + K++LGTHTS
Sbjct: 11 IKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNGLIDA--KLLLGTHTSNQS 68
Query: 77 PNYLMLAQVQLPLD 90
N L +A QL D
Sbjct: 69 ANQLKVASTQLSAD 82
Score = 52 (23.4 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGD 418
HT SWNP + ++ + A+DN + + N + D+ D
Sbjct: 142 HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNKTTFKSDIQKD 187
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 139/393 (35%), Positives = 216/393 (54%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
++EEY +WK N P +YD V L WPSLTV+WLP + + Q++I+GTHTS E
Sbjct: 10 VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGEE 69
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ 136
NYL A++ LP + N+ + ++I + H+ E+ RARYMPQ
Sbjct: 70 ENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMPQ 129
Query: 137 NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196
+P ++AT ++ + VF YS+ +G S L+ H GY LS+S +G LLS
Sbjct: 130 DPNIVAT--INGQGTVFLYSRS------EGLQST---LKFHKDNGYALSFSTLVKGRLLS 178
Query: 197 GSDDAQICLWDINAA-PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255
GSDD + LW++ + K + +H ++ D WH ++ LFG+V +D L I
Sbjct: 179 GSDDHTVALWEVGSGGDPTKPVRTWN--DLHSDIINDNKWHNFNKDLFGTVSEDSLLKIN 236
Query: 256 DLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS 315
D+R + + + +V Q N LAF+ + +LA D V L+DLR + LH
Sbjct: 237 DVRANNTT--IDTVKCPQP-FNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKEPLHHMSG 293
Query: 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS 375
H++ V + ++ + ++ S RLM+WDL +I EQTP+DAEDG PEL+ +H GH S
Sbjct: 294 HEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRS 353
Query: 376 KISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408
++DF NP W+++S E+NILQ+W+ + ++
Sbjct: 354 SVNDFDLNPQIPWLVASAEEENILQVWKCSHSL 386
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 120/168 (71%), Positives = 142/168 (84%)
Query: 246 VGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRK 305
V DDQ L+IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR
Sbjct: 1 VADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 60
Query: 306 ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPE 365
+ LH+F+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPE
Sbjct: 61 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPE 120
Query: 366 LLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
LLFIHGGHT+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 121 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 168
Score = 153 (58.9 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 42/182 (23%), Positives = 85/182 (46%)
Query: 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
+DD ++ +WD + +K ++ H V ++++ E++ + D+ + +WDL
Sbjct: 2 ADDQKLMIWDTRSNNTSKPSHSVD---AHTAEVNCLSFNPYSEFILATGSADKTVALWDL 58
Query: 258 RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS-- 315
R ++ + S +H+ E+ + ++P NE ILA+ TD+ + ++DL KI D+
Sbjct: 59 R--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED 116
Query: 316 -----------HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR-IDEEQTPEDAEDGP 363
H ++ WNP ++ S + VW ++ I ++ PE + D
Sbjct: 117 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD-- 174
Query: 364 PE 365
PE
Sbjct: 175 PE 176
Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 35/145 (24%), Positives = 73/145 (50%)
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
P + H+ E LS++ + E L +GS D + LWD+ +N L+ + F+ H+
Sbjct: 20 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKLK-LHSFESHKDE 74
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDL------RTPSVSK--PVQSVV---AHQSEVNC 278
+ V W +E + S G D+ L +WDL ++P ++ P + + H ++++
Sbjct: 75 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 134
Query: 279 LAFNPFNEWILATGSTDKTVKLFDL 303
++NP W++ + S D ++++ +
Sbjct: 135 FSWNPNEPWVICSVSEDNIMQVWQM 159
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 126/274 (45%), Positives = 173/274 (63%)
Query: 148 AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD 207
A V ++D SKH S P G +P + L GH EG+GLSWS GHL +G D + +
Sbjct: 144 ARVMIWDRSKHQSVPT--GTVNPQMELLGHKQEGFGLSWSPHVAGHLATGRD---LTTYT 198
Query: 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267
N NK+L+ ++ + H +V DV H H L G+V DD L I D R ++
Sbjct: 199 KN----NKALQPVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAA 254
Query: 268 SVVA-HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWN 326
+ H+ +N +AFNP E +LATGS DKT+ L+DLR + T LHT ++H + V + W+
Sbjct: 255 TAEGQHRDAINAIAFNPAAETVLATGSADKTIGLWDLRNLKTKLHTLENHTDSVTSISWH 314
Query: 327 PKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCE 386
P E +LAS R++M WDLSR EEQTPEDA+DGPPELLF+HGGHT++ISDFSWN +
Sbjct: 315 PFEEAVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLND 374
Query: 387 DWVISSVAEDNILQIWQMAENIY-HDEDDLPGDE 419
WV+ S AEDN+LQ+W++A+ I D +D+P +E
Sbjct: 375 PWVLCSAAEDNLLQVWKVADAIVGKDMEDVPTEE 408
Score = 429 (156.1 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 86/191 (45%), Positives = 121/191 (63%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
++INEEYK WKKN PFLYD++++ ALEWP+LT +WLPD+++ K YS +++LGTHTS
Sbjct: 23 KIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQDASDKPYSTHRLLLGTHTSS 82
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKV------QIIQQINHDGEV 128
+ NYL +AQVQLP ++ N YD++R + GG+G ++ K +I+Q+I+H GEV
Sbjct: 83 DAQNYLQIAQVQLPNPNAPNPD-DYDEERGEIGGYGGSSKKAPMEINFKIVQKIDHKGEV 141
Query: 129 NRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK 188
N+AR M ++D SKH S P G +P + L GH EG+GLSWS
Sbjct: 142 NKARVM-----------------IWDRSKHQSVPT--GTVNPQMELLGHKQEGFGLSWSP 182
Query: 189 FKEGHLLSGSD 199
GHL +G D
Sbjct: 183 HVAGHLATGRD 193
Score = 118 (46.6 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-----IFKVHEG 228
L H+ +SW F+E L S S D +I WD++ A + ++ E Q + +H G
Sbjct: 301 LENHTDSVTSISWHPFEEAVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGG 360
Query: 229 V---VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275
+ D +W+L ++ S +D L +W + V K ++ V + E
Sbjct: 361 HTNRISDFSWNLNDPWVLCSAAEDNLLQVWKVADAIVGKDMEDVPTEELE 410
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 115/161 (71%), Positives = 137/161 (85%)
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT 312
+IWD R+ + SKP SV AH +EVNCL+FNP++E+ILATGS DKTV L+DLR + LH+
Sbjct: 1 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 60
Query: 313 FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG 372
F+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDAEDGPPELLFIHGG
Sbjct: 61 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGG 120
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
HT+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED
Sbjct: 121 HTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 161
Score = 131 (51.2 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 35/145 (24%), Positives = 73/145 (50%)
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
P + H+ E LS++ + E L +GS D + LWD+ +N L+ + F+ H+
Sbjct: 13 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKLK-LHSFESHKDE 67
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDL------RTPSVSK--PVQSVV---AHQSEVNC 278
+ V W +E + S G D+ L +WDL ++P ++ P + + H ++++
Sbjct: 68 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 127
Query: 279 LAFNPFNEWILATGSTDKTVKLFDL 303
++NP W++ + S D ++++ +
Sbjct: 128 FSWNPNEPWVICSVSEDNIMQVWQM 152
>GENEDB_PFALCIPARUM|PF14_0314 [details] [associations]
symbol:PF14_0314 "chromatin assembly factor 1
p55 subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 134/408 (32%), Positives = 229/408 (56%)
Query: 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPN 78
+ YK W+ NT LY++++ + EWPSL +EWLP + ++Y+ Q +ILGT+T+E N
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLP-KVYKNDEEYAYQDLILGTYTTEKN-N 87
Query: 79 YLMLAQVQLPLDDSENDARHYD---DDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMP 135
Y+++ +V LP ++ + +Y+ D R +F N +++ +I H+ E+N+ P
Sbjct: 88 YILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIK--NKIYHESEINKISCYP 145
Query: 136 QNPFLIATKTVSAEVYVF---DYSKHPSKPPL--DGACSPDLRLRGHSTEGYGLSWSKFK 190
+N ++A + +F DY + + D + D L+GH +G+GL W K
Sbjct: 146 ENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLYQGWGLEWDD-K 204
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
++ S DD+ +C+WD+N + +K + + + H ++D W+ + L SV ++
Sbjct: 205 NNYISSCGDDSYLCIWDMNTS--DKIMHPIVKYFNHNIPLQDCCWN-DNNVL--SVSENG 259
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
++ I+D+R +V V S+ A +N + NP N+ I AT T+K + L+D+R + +L
Sbjct: 260 HINIYDIRNKTV---VNSICATNCTLNSIDVNPHNKNIFATAGTNKEIDLWDMRFTNKSL 316
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
H S KE + ++ W+ IL+S + + +D ++I EQT ED++DGPPEL+FIH
Sbjct: 317 HRIISQKETIIKLKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIH 376
Query: 371 GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGD 418
GGH+S I D+S N +ISS++EDN L IWQ ++ Y D D D
Sbjct: 377 GGHSSNILDYSLNNSYSMMISSISEDNTLHIWQPSKQAYEDASDTYDD 424
>UNIPROTKB|Q8ILD0 [details] [associations]
symbol:PF14_0314 "Chromatin assembly factor 1 P55 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 134/408 (32%), Positives = 229/408 (56%)
Query: 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPN 78
+ YK W+ NT LY++++ + EWPSL +EWLP + ++Y+ Q +ILGT+T+E N
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLP-KVYKNDEEYAYQDLILGTYTTEKN-N 87
Query: 79 YLMLAQVQLPLDDSENDARHYD---DDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMP 135
Y+++ +V LP ++ + +Y+ D R +F N +++ +I H+ E+N+ P
Sbjct: 88 YILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIK--NKIYHESEINKISCYP 145
Query: 136 QNPFLIATKTVSAEVYVF---DYSKHPSKPPL--DGACSPDLRLRGHSTEGYGLSWSKFK 190
+N ++A + +F DY + + D + D L+GH +G+GL W K
Sbjct: 146 ENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLYQGWGLEWDD-K 204
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
++ S DD+ +C+WD+N + +K + + + H ++D W+ + L SV ++
Sbjct: 205 NNYISSCGDDSYLCIWDMNTS--DKIMHPIVKYFNHNIPLQDCCWN-DNNVL--SVSENG 259
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
++ I+D+R +V V S+ A +N + NP N+ I AT T+K + L+D+R + +L
Sbjct: 260 HINIYDIRNKTV---VNSICATNCTLNSIDVNPHNKNIFATAGTNKEIDLWDMRFTNKSL 316
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
H S KE + ++ W+ IL+S + + +D ++I EQT ED++DGPPEL+FIH
Sbjct: 317 HRIISQKETIIKLKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIH 376
Query: 371 GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGD 418
GGH+S I D+S N +ISS++EDN L IWQ ++ Y D D D
Sbjct: 377 GGHSSNILDYSLNNSYSMMISSISEDNTLHIWQPSKQAYEDASDTYDD 424
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 132/406 (32%), Positives = 225/406 (55%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
+ ++ WK N+ LYD V LEWPSL+V++ E + Q + +GTHTS E
Sbjct: 43 VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFGDFHHENLENNVLNQIVCVGTHTSNKE 102
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFG-CANGKVQIIQ-QINHDGEVNRARYM 134
PN+L + V PL+ + Y + + + GF C+ K I+ +I H GEVNR +++
Sbjct: 103 PNFLYVCDVLFPLEQVPQEKCIYKSNEN-YEGFDFCSEKKKFTIKSKIAHTGEVNRIKFV 161
Query: 135 P-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193
P + + TK V V++FD +KH + +D +P++ G+ ++G+GL + K+ +
Sbjct: 162 PLEKKNFVVTKAVDGNVHLFDINKHKIET-VDDKMNPEVSFVGNQSDGFGLDFQPIKK-Y 219
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L+ ++D I ++D N K+++ +KV ++ V D++ L + D+ Y+
Sbjct: 220 ILTCANDGLINVYDYNTL-NTKTVQPF--YKVQYKSPVNDIS-PTNDPNLILACADNGYI 275
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT 312
LI+D R S ++P Q + Q VN +A N F + A+GS + +K++DL+K H
Sbjct: 276 LIFDFRIKS-NEPAQQTLGQQVPVNTVALNTFTG-LFASGSDNGKIKVWDLKKFHEPQHI 333
Query: 313 FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG 372
++HKE + ++ ++P + +ILAS R + V+DL++I EE D DGP EL+F HGG
Sbjct: 334 INAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLSDGPSELIFSHGG 393
Query: 373 HTSKISDFSWNPCED--WVISSVAEDNILQIWQMAENIYHDEDDLP 416
HT ++DF+WN + I S +EDN LQ WQ+ + + + +P
Sbjct: 394 HTQPVTDFNWNHHKKLKMFIGSTSEDNTLQFWQLKSELLDETNTIP 439
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 132/406 (32%), Positives = 225/406 (55%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
+ ++ WK N+ LYD V LEWPSL+V++ E + Q + +GTHTS E
Sbjct: 43 VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFGDFHHENLENNVLNQIVCVGTHTSNKE 102
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFG-CANGKVQIIQ-QINHDGEVNRARYM 134
PN+L + V PL+ + Y + + + GF C+ K I+ +I H GEVNR +++
Sbjct: 103 PNFLYVCDVLFPLEQVPQEKCIYKSNEN-YEGFDFCSEKKKFTIKSKIAHTGEVNRIKFV 161
Query: 135 P-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193
P + + TK V V++FD +KH + +D +P++ G+ ++G+GL + K+ +
Sbjct: 162 PLEKKNFVVTKAVDGNVHLFDINKHKIET-VDDKMNPEVSFVGNQSDGFGLDFQPIKK-Y 219
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L+ ++D I ++D N K+++ +KV ++ V D++ L + D+ Y+
Sbjct: 220 ILTCANDGLINVYDYNTL-NTKTVQPF--YKVQYKSPVNDIS-PTNDPNLILACADNGYI 275
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT 312
LI+D R S ++P Q + Q VN +A N F + A+GS + +K++DL+K H
Sbjct: 276 LIFDFRIKS-NEPAQQTLGQQVPVNTVALNTFTG-LFASGSDNGKIKVWDLKKFHEPQHI 333
Query: 313 FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG 372
++HKE + ++ ++P + +ILAS R + V+DL++I EE D DGP EL+F HGG
Sbjct: 334 INAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLSDGPSELIFSHGG 393
Query: 373 HTSKISDFSWNPCED--WVISSVAEDNILQIWQMAENIYHDEDDLP 416
HT ++DF+WN + I S +EDN LQ WQ+ + + + +P
Sbjct: 394 HTQPVTDFNWNHHKKLKMFIGSTSEDNTLQFWQLKSELLDETNTIP 439
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 348 (127.6 bits), Expect = 3.2e-56, Sum P(2) = 3.2e-56
Identities = 74/207 (35%), Positives = 115/207 (55%)
Query: 222 IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-AHQSEVNCLA 280
++ HE VEDVA+ F SVGDD L++WD RT + PV V AH ++++C+
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGT--NPVTKVEKAHDADLHCVD 344
Query: 281 FNPFNEWILATGSTDKTVKLFDLRKIS-----TALHTFDSHKEEVFQVGWNPKNETILAS 335
+NP ++ ++ TGS D TV+LFD RK++ + ++ F+ HK V V W+P ++ S
Sbjct: 345 WNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGS 404
Query: 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAE 395
L +WD R+ ++ + A P L F H GH K+ DF WN + W I SV++
Sbjct: 405 SAEDGLLNIWDYDRVSKKS--DRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSD 462
Query: 396 D-------NILQIWQMAENIYHDEDDL 415
D LQIW+M++ IY E+++
Sbjct: 463 DCETTGGGGTLQIWRMSDLIYRPEEEV 489
Score = 249 (92.7 bits), Expect = 3.2e-56, Sum P(2) = 3.2e-56
Identities = 66/198 (33%), Positives = 103/198 (52%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
++E+Y WK P LYD + H L WPSL+ W P E+ K+ Q++ L T +
Sbjct: 64 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSV 121
Query: 77 PNYLMLAQVQL--P-LDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARY 133
PN L++A ++ P + +E+ ++ ++ RS F V+ + I H GEVNR R
Sbjct: 122 PNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKYKTIIHPGEVNRIRE 172
Query: 134 MPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACS--PDLRLRGHSTEG-YGLSWSKFK 190
+PQN ++AT T S +V ++D P++ + GA + PDL L GH + L+
Sbjct: 173 LPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCP-T 231
Query: 191 EGHLLSGSDDAQICLWDI 208
E +LSG D + LW I
Sbjct: 232 EPFVLSGGKDKSVVLWSI 249
>POMBASE|SPAC25H1.06 [details] [associations]
symbol:pcf3 "CAF assembly factor (CAF-1) complex subunit
C, Pcf3" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IC] [GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067
"negative regulation of histone acetylation" evidence=IMP]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IMP]
[GO:0070829 "heterochromatin maintenance" evidence=IMP] [GO:0090053
"positive regulation of chromatin silencing at centromere"
evidence=IMP] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.06 GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000790
GO:GO:0043596 GO:GO:0006335 GO:GO:0035067 GO:GO:0051574
GO:GO:0033186 KO:K10752 InterPro:IPR022052 Pfam:PF12265
GO:GO:0090055 HOGENOM:HOG000160330 OrthoDB:EOG44TSHP GO:GO:0070829
GO:GO:0090053 PIR:T38386 RefSeq:NP_593810.1
ProteinModelPortal:Q9Y825 STRING:Q9Y825 EnsemblFungi:SPAC25H1.06.1
GeneID:2541656 KEGG:spo:SPAC25H1.06 OMA:MESITEK NextBio:20802749
Uniprot:Q9Y825
Length = 408
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 129/395 (32%), Positives = 217/395 (54%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
I+E++ WKKN+ LY+L+IT L WPSL+++WL E K +++LGTH +E
Sbjct: 20 ISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAAEGM 79
Query: 77 PNYLMLAQVQLPLDDSE---NDARHYDDDRSDFGGFGCANG-KVQIIQQINHDGEVNRAR 132
PN+L LA + LP D ++ + +HY++D + GG+ + K QI Q+I H+G+VNR R
Sbjct: 80 PNFLQLADLDLP-DFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNRVR 138
Query: 133 YMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG 192
+MPQNP +IAT + Y+FD +K+ S P + P++ L GH EG+GLSW++ +
Sbjct: 139 HMPQNPNIIATMSSCGNAYIFDRTKYTSMPAEEFL--PNISLIGHKKEGFGLSWNRQQNC 196
Query: 193 HLLSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY 251
L++ ++D++I WD+N ++ + L ++ F + V DV +H H L+ +V D+
Sbjct: 197 RLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIAVNDNGI 256
Query: 252 LLIWDLRTPSV-SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
I D R SK V++ + + + NP + A GS ++ ++L+DLR ++ ++
Sbjct: 257 AFICDNRLQQTCSKTVKA----SNPLFSVRHNPSIATLFALGS-EQDLQLWDLRNLNKSV 311
Query: 311 -HTFDSHKEEVFQVGWNPKNETILA-SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLF 368
+T + + +V P T+ S R +S E + P L F
Sbjct: 312 FNTSEDLSDNRLKV---PSRLTLGGTSLSWSWRHSGRIVSACQEYCYVWNFNKANP-LEF 367
Query: 369 IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
+H GH +++ ++P E I+SVA+DN L IW+
Sbjct: 368 VHAGHKGTVNEVDFDPFEAQCIASVADDNELHIWK 402
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 372 (136.0 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 95/277 (34%), Positives = 138/277 (49%)
Query: 164 LDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF 223
LD S D + H G L W G LSGS+DAQI LW ++ KS +Q+F
Sbjct: 201 LDNFDSVDYKY--HKQGGIALDWVD-NNG-FLSGSNDAQIALWQVD-----KSSTPLQLF 251
Query: 224 KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSVVAHQSEV-NCLAF 281
K H G + D++ ++ ++LFGSV DD D R + PV + S + NC+ F
Sbjct: 252 KGHHGAINDIS-SIKEKHLFGSVSDDSTTQFHDTRVNATDINPV--ITVENSHIQNCIQF 308
Query: 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341
+P + + ATG D V L+D+R ST F H + V Q+ W+ N IL SC L +R
Sbjct: 309 HPDIQTLYATGGKDNVVSLYDIRNYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKR 368
Query: 342 LMVWDLSRIDEEQT-PEDAEDGP-------------PELLFIHGGHTSKISDFSWNPCED 387
++ WDL +DE+ T P+ +G P L ++HGGHT + +DF +P
Sbjct: 369 IIFWDLKNLDEDFTYPDATSNGKDTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVK 428
Query: 388 WVISSVAEDNILQIWQMAENIYHDEDDLPGDESAKAS 424
+ SV +D +L+IW+ LPGDE + S
Sbjct: 429 NIFGSVGDDKLLEIWK--------PKSLPGDEPEQES 457
Score = 165 (63.1 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
+++NEE+KIWKK P LYD + T AL+ PSL +WLP D + K ++GT+
Sbjct: 70 KIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLPTTSVSQS-DLEL-KFLIGTNAIN 127
Query: 75 NEPNYLMLAQVQLPLD-DSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARY 133
NYL L + LP D+ D D F +++ Q E+N+ +
Sbjct: 128 KSENYLKLTSISLPSTLVGATDSIPVPSDGIDTSNF-------KVVTQWKQTQEINKLKV 180
Query: 134 MPQNPFLI 141
P +
Sbjct: 181 SPNGSLAV 188
Score = 65 (27.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275
H D H + + +FGSVGDD+ L IW ++ +P Q Q +
Sbjct: 414 HTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLPGDEPEQESTEVQED 463
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 372 (136.0 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 95/277 (34%), Positives = 138/277 (49%)
Query: 164 LDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF 223
LD S D + H G L W G LSGS+DAQI LW ++ KS +Q+F
Sbjct: 201 LDNFDSVDYKY--HKQGGIALDWVD-NNG-FLSGSNDAQIALWQVD-----KSSTPLQLF 251
Query: 224 KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSVVAHQSEV-NCLAF 281
K H G + D++ ++ ++LFGSV DD D R + PV + S + NC+ F
Sbjct: 252 KGHHGAINDIS-SIKEKHLFGSVSDDSTTQFHDTRVNATDINPV--ITVENSHIQNCIQF 308
Query: 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341
+P + + ATG D V L+D+R ST F H + V Q+ W+ N IL SC L +R
Sbjct: 309 HPDIQTLYATGGKDNVVSLYDIRNYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKR 368
Query: 342 LMVWDLSRIDEEQT-PEDAEDGP-------------PELLFIHGGHTSKISDFSWNPCED 387
++ WDL +DE+ T P+ +G P L ++HGGHT + +DF +P
Sbjct: 369 IIFWDLKNLDEDFTYPDATSNGKDTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVK 428
Query: 388 WVISSVAEDNILQIWQMAENIYHDEDDLPGDESAKAS 424
+ SV +D +L+IW+ LPGDE + S
Sbjct: 429 NIFGSVGDDKLLEIWK--------PKSLPGDEPEQES 457
Score = 165 (63.1 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
+++NEE+KIWKK P LYD + T AL+ PSL +WLP D + K ++GT+
Sbjct: 70 KIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLPTTSVSQS-DLEL-KFLIGTNAIN 127
Query: 75 NEPNYLMLAQVQLPLD-DSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARY 133
NYL L + LP D+ D D F +++ Q E+N+ +
Sbjct: 128 KSENYLKLTSISLPSTLVGATDSIPVPSDGIDTSNF-------KVVTQWKQTQEINKLKV 180
Query: 134 MPQNPFLI 141
P +
Sbjct: 181 SPNGSLAV 188
Score = 65 (27.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275
H D H + + +FGSVGDD+ L IW ++ +P Q Q +
Sbjct: 414 HTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLPGDEPEQESTEVQED 463
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 327 (120.2 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 65/175 (37%), Positives = 97/175 (55%)
Query: 18 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGK-DYSVQKMILGTHTSENE 76
NE + IW+KNTPFLY ++ H L+WPSLTVE+L K +Y K++LGTHTS +
Sbjct: 38 NERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFLGGDNSFKSKLNYFTNKVLLGTHTSNQD 97
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG----KVQIIQQINHDGEVNRAR 132
Y+ + +++ P+ + D Y++ G ++ ++ H GEV RA
Sbjct: 98 LEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPSFEVKAKLLHPGEVIRAT 157
Query: 133 YMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 187
+P N F I T+T + +FDY+KHPS P C P + L+GH+ EG GL W+
Sbjct: 158 NLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILKGHTNEGSGLCWN 212
Score = 217 (81.4 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 74/272 (27%), Positives = 124/272 (45%)
Query: 60 DYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG----K 115
+Y K++LGTHTS + Y+ + +++ P+ + D Y++ G
Sbjct: 81 NYFTNKVLLGTHTSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPS 140
Query: 116 VQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175
++ ++ H GEV RA +P N F I T+T + +FDY+KHPS P C P + L+
Sbjct: 141 FEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILK 200
Query: 176 GHSTEGYGLSWS------KFK-----EGH----LLSGSDDAQICLWDINAAPKNKSLEAM 220
GH+ EG GL W+ +K +G+ L +G +D I DI + SL+
Sbjct: 201 GHTNEGSGLCWNVNRVYDSYKNPNIFDGYMEKVLYTGKEDDSIK--DIYSVKDMYSLK-- 256
Query: 221 QIFKVHE-GVVEDVA-----WHLRHEYLFGSVGDDQYL-LIWDLRTPSVSKPVQSVVAHQ 273
F + + VED+A +R Y + L ++ DL T + + +
Sbjct: 257 DTFSLKDTNSVEDIASSKDIQSVRGAYSIKELEAHNDLDIVNDLDTEESNDSISNSNTFG 316
Query: 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRK 305
+EVN +LA+ S D ++ L+D+ K
Sbjct: 317 TEVNT------TNLLLASCSVDGSICLWDINK 342
Score = 207 (77.9 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 49/186 (26%), Positives = 91/186 (48%)
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILA 290
D+ +H + G D+ Y+ I+D+R + + +E +N +F+ F+E+I +
Sbjct: 392 DIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFSEYIFS 451
Query: 291 TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
G +D + ++D+R +L H + + ++ + + I ASC +WD+SR
Sbjct: 452 CGYSDGLISVWDMRYNKESLLKLKYHTQGINRIKFGMISSGIFASCSDDGTACIWDISRN 511
Query: 351 DEEQ------TPEDAEDGP---P-ELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQ 400
+ Q T +D + P P +LLF+HGGH I D +W + I++V DN +
Sbjct: 512 NNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGVDNSIH 571
Query: 401 IWQMAE 406
+W + E
Sbjct: 572 VWHLNE 577
Score = 69 (29.3 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 55/233 (23%), Positives = 99/233 (42%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L S S D ICLWDIN KS + + + +++ G D +
Sbjct: 326 LASCSVDGSICLWDINKG--TKSNDVPRTYGLNKS---------------GKTADYN-IK 367
Query: 254 IWDLRTPSVSKPVQSVVAHQSEV--NCLAFNPFNEWILATGSTDKTVKLFDLRK---IST 308
I++ TP++S P+ + ++ N + F+P L + + ++D+RK +
Sbjct: 368 IYE-NTPTLS-PLCTWYNKNTKTAFNDIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTK 425
Query: 309 ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM-VWDLSRIDEEQTPEDA--EDGPPE 365
A F+ + E + ++ +E I SC L+ VWD+ R ++E + G
Sbjct: 426 AEICFNDYNEPMNTFSFDNFSEYIF-SCGYSDGLISVWDM-RYNKESLLKLKYHTQGINR 483
Query: 366 LLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLP 416
+ F I G + SD C W IS IL + + ++IY++ + +P
Sbjct: 484 IKFGMISSGIFASCSD-DGTACI-WDISRNNNTQILPLQKTEDDIYNNPNPVP 534
Score = 68 (29.0 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 172 LRLRGHSTEGYG-LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
L+L+ H T+G + + G S SDD C+WDI+ +N + + + + K + +
Sbjct: 472 LKLKYH-TQGINRIKFGMISSGIFASCSDDGTACIWDIS---RNNNTQILPLQKTEDDI 526
Score = 68 (29.0 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 185 SWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244
S+ F E G D I +WD+ NK E++ K H + + + + +F
Sbjct: 441 SFDNFSEYIFSCGYSDGLISVWDMRY---NK--ESLLKLKYHTQGINRIKFGMISSGIFA 495
Query: 245 SVGDDQYLLIWDL 257
S DD IWD+
Sbjct: 496 SCSDDGTACIWDI 508
Score = 57 (25.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
DI P + + + H G + D+AW + + +VG D + +W L
Sbjct: 525 DIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGVDNSIHVWHL 575
Score = 43 (20.2 bits), Expect = 4.8e-34, Sum P(3) = 4.8e-34
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 332 ILASCCLGRRLMVWDLSR 349
+LASC + + +WD+++
Sbjct: 325 LLASCSVDGSICLWDINK 342
Score = 43 (20.2 bits), Expect = 4.8e-34, Sum P(3) = 4.8e-34
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 272 HQSEVNCLAFNPFNEWILATGSTDKTVK-LFDLRKISTALHTF 313
+ S N F+ + E +L TG D ++K ++ ++ + + TF
Sbjct: 217 YDSYKNPNIFDGYMEKVLYTGKEDDSIKDIYSVKDMYSLKDTF 259
Score = 41 (19.5 bits), Expect = 5.6e-31, Sum P(2) = 5.6e-31
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN 209
GH Y L+W+ + + D I +W +N
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVWHLN 576
Score = 39 (18.8 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 228 GVVEDV-AWHLRHEYLF 243
GV + WHL ++LF
Sbjct: 565 GVDNSIHVWHLNEQFLF 581
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 327 (120.2 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 65/175 (37%), Positives = 97/175 (55%)
Query: 18 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGK-DYSVQKMILGTHTSENE 76
NE + IW+KNTPFLY ++ H L+WPSLTVE+L K +Y K++LGTHTS +
Sbjct: 38 NERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFLGGDNSFKSKLNYFTNKVLLGTHTSNQD 97
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG----KVQIIQQINHDGEVNRAR 132
Y+ + +++ P+ + D Y++ G ++ ++ H GEV RA
Sbjct: 98 LEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPSFEVKAKLLHPGEVIRAT 157
Query: 133 YMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 187
+P N F I T+T + +FDY+KHPS P C P + L+GH+ EG GL W+
Sbjct: 158 NLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILKGHTNEGSGLCWN 212
Score = 217 (81.4 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 74/272 (27%), Positives = 124/272 (45%)
Query: 60 DYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG----K 115
+Y K++LGTHTS + Y+ + +++ P+ + D Y++ G
Sbjct: 81 NYFTNKVLLGTHTSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPS 140
Query: 116 VQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175
++ ++ H GEV RA +P N F I T+T + +FDY+KHPS P C P + L+
Sbjct: 141 FEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILK 200
Query: 176 GHSTEGYGLSWS------KFK-----EGH----LLSGSDDAQICLWDINAAPKNKSLEAM 220
GH+ EG GL W+ +K +G+ L +G +D I DI + SL+
Sbjct: 201 GHTNEGSGLCWNVNRVYDSYKNPNIFDGYMEKVLYTGKEDDSIK--DIYSVKDMYSLK-- 256
Query: 221 QIFKVHE-GVVEDVA-----WHLRHEYLFGSVGDDQYL-LIWDLRTPSVSKPVQSVVAHQ 273
F + + VED+A +R Y + L ++ DL T + + +
Sbjct: 257 DTFSLKDTNSVEDIASSKDIQSVRGAYSIKELEAHNDLDIVNDLDTEESNDSISNSNTFG 316
Query: 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRK 305
+EVN +LA+ S D ++ L+D+ K
Sbjct: 317 TEVNT------TNLLLASCSVDGSICLWDINK 342
Score = 207 (77.9 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 49/186 (26%), Positives = 91/186 (48%)
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILA 290
D+ +H + G D+ Y+ I+D+R + + +E +N +F+ F+E+I +
Sbjct: 392 DIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFSEYIFS 451
Query: 291 TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
G +D + ++D+R +L H + + ++ + + I ASC +WD+SR
Sbjct: 452 CGYSDGLISVWDMRYNKESLLKLKYHTQGINRIKFGMISSGIFASCSDDGTACIWDISRN 511
Query: 351 DEEQ------TPEDAEDGP---P-ELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQ 400
+ Q T +D + P P +LLF+HGGH I D +W + I++V DN +
Sbjct: 512 NNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGVDNSIH 571
Query: 401 IWQMAE 406
+W + E
Sbjct: 572 VWHLNE 577
Score = 69 (29.3 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 55/233 (23%), Positives = 99/233 (42%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L S S D ICLWDIN KS + + + +++ G D +
Sbjct: 326 LASCSVDGSICLWDINKG--TKSNDVPRTYGLNKS---------------GKTADYN-IK 367
Query: 254 IWDLRTPSVSKPVQSVVAHQSEV--NCLAFNPFNEWILATGSTDKTVKLFDLRK---IST 308
I++ TP++S P+ + ++ N + F+P L + + ++D+RK +
Sbjct: 368 IYE-NTPTLS-PLCTWYNKNTKTAFNDIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTK 425
Query: 309 ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM-VWDLSRIDEEQTPEDA--EDGPPE 365
A F+ + E + ++ +E I SC L+ VWD+ R ++E + G
Sbjct: 426 AEICFNDYNEPMNTFSFDNFSEYIF-SCGYSDGLISVWDM-RYNKESLLKLKYHTQGINR 483
Query: 366 LLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLP 416
+ F I G + SD C W IS IL + + ++IY++ + +P
Sbjct: 484 IKFGMISSGIFASCSD-DGTACI-WDISRNNNTQILPLQKTEDDIYNNPNPVP 534
Score = 68 (29.0 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 172 LRLRGHSTEGYG-LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
L+L+ H T+G + + G S SDD C+WDI+ +N + + + + K + +
Sbjct: 472 LKLKYH-TQGINRIKFGMISSGIFASCSDDGTACIWDIS---RNNNTQILPLQKTEDDI 526
Score = 68 (29.0 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 185 SWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244
S+ F E G D I +WD+ NK E++ K H + + + + +F
Sbjct: 441 SFDNFSEYIFSCGYSDGLISVWDMRY---NK--ESLLKLKYHTQGINRIKFGMISSGIFA 495
Query: 245 SVGDDQYLLIWDL 257
S DD IWD+
Sbjct: 496 SCSDDGTACIWDI 508
Score = 57 (25.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
DI P + + + H G + D+AW + + +VG D + +W L
Sbjct: 525 DIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGVDNSIHVWHL 575
Score = 43 (20.2 bits), Expect = 4.8e-34, Sum P(3) = 4.8e-34
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 332 ILASCCLGRRLMVWDLSR 349
+LASC + + +WD+++
Sbjct: 325 LLASCSVDGSICLWDINK 342
Score = 43 (20.2 bits), Expect = 4.8e-34, Sum P(3) = 4.8e-34
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 272 HQSEVNCLAFNPFNEWILATGSTDKTVK-LFDLRKISTALHTF 313
+ S N F+ + E +L TG D ++K ++ ++ + + TF
Sbjct: 217 YDSYKNPNIFDGYMEKVLYTGKEDDSIKDIYSVKDMYSLKDTF 259
Score = 41 (19.5 bits), Expect = 5.6e-31, Sum P(2) = 5.6e-31
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN 209
GH Y L+W+ + + D I +W +N
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVWHLN 576
Score = 39 (18.8 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 228 GVVEDV-AWHLRHEYLF 243
GV + WHL ++LF
Sbjct: 565 GVDNSIHVWHLNEQFLF 581
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 115/408 (28%), Positives = 213/408 (52%)
Query: 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPD-------REEPPGKDYSVQKMILGTH 71
+ Y++WKKN P LYD ++T++L WPSL+V++ PD E + Q+++LGT
Sbjct: 41 QNYRVWKKNAPLLYDYLVTNSLLWPSLSVQFFPDITHINDLGENKNEEQIIAQRILLGTF 100
Query: 72 TSENEPNYLMLAQVQLPLDDSEN---DARHYDDDRSDFGGFGCANGKVQIIQQINHDGEV 128
T +++ + Q+ + ++N + ++ +R +F + K + +Q+INH G+V
Sbjct: 101 TLGQAIDHISILQIPSFKNLNQNIKINKLDFNPEREEFELTTPSLNKTKTLQKINHLGDV 160
Query: 129 NRARYMPQNPFLIATKTVSAEVYVFDYSKHPS--KPPLDGACSPDLRLR---GH---STE 180
N+ RYMPQ P ++A+ + +++ ++H S LD +++R H +T+
Sbjct: 161 NKVRYMPQKPNILASANNLGNLVIYERTRHKSFKNTILDDTDLSKVQVRLVNKHIPSTTD 220
Query: 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE 240
+ + W++ EG LLS + + L+D+ ++++L Q ++ + V D+ W H+
Sbjct: 221 IFAIDWNRNSEGLLLSADMNGLVNLYDLKKY-ESETLNESQYWENNAIGVNDIEWFPTHD 279
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
LF + D+ +L ++D R S + VQ+ S VN +A NP LATG ++ +K+
Sbjct: 280 SLFCTADDNGWLKLYDTRNQSAA--VQNANIGNS-VNSVACNPGYATGLATGDSNGVIKM 336
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
+D+R +L H + V Q+ WNPK IL S + + D+S + T
Sbjct: 337 WDIRNFDNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLHDMSN---DST----- 388
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408
+F H GH ++DF W+ + W+++SVA+DN L +W+ ++
Sbjct: 389 ------IFTHLGHMLGVNDFDWSYADPWMVASVADDNSLHVWKPTHSV 430
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 116/419 (27%), Positives = 198/419 (47%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
+ E Y WKKNT LYD + T++ +WPSLT ++ PD + + +++L + TS +
Sbjct: 19 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 74
Query: 77 PN--YLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN-GKVQIIQQIN---HDGEVNR 130
P + ++++ + ++D D +F ++ I+ +GE NR
Sbjct: 75 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 134
Query: 131 ARYMPQNPFLIATKTVSAEVYVFDYSKH------------PSKPPLDGACS--PDLRLRG 176
ARY+PQNP +IA + +Y+FD +KH P + L G+ D+
Sbjct: 135 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 194
Query: 177 HST----EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH-EGV-V 230
S+ E L+W+ +E LLS + Q+ +WDI + + + ++ +G V
Sbjct: 195 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 254
Query: 231 EDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILA 290
DV W H+ LF + + + + DLRT K + H VN FN N ILA
Sbjct: 255 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKK-EKLQSNREKHDGGVNSCRFNYKNSLILA 313
Query: 291 TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM-VWDLSR 349
+ ++ + L+D+R ++ + H V + W+P +T+LA+ L+ +WD S
Sbjct: 314 SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 373
Query: 350 IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408
E+T +F HGGH ++D SW+ + W++ SVA DN + IW+ A N+
Sbjct: 374 ---EET-----------IFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNL 418
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 108/374 (28%), Positives = 181/374 (48%)
Query: 32 YDLVITHALEWPSLTVEWLPDREEPPGKDYS-VQKMILGTHTSENEPNYLMLAQV-QLPL 89
YD++ + ++EWP L+ + D Y ++ GT E + N +++ + QL
Sbjct: 92 YDMMHSMSVEWPCLSFHPIKDELGAQRNKYPHTMYLVAGTQADEAKNNKVIIMKAKQLHK 151
Query: 90 -----DDSENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGEVNRARYMPQNPFLIAT 143
+DS++D DD+ SD + ++ + INH+G VNR R M Q ++AT
Sbjct: 152 TKHDDEDSDDDEDSDDDEESDDEDDEDKDVDPELQLAFINHNGAVNRIRSMDQQSNIVAT 211
Query: 144 KTVSAEVYVFDYSKH----PSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199
+ + VY+++ + H ++ +P + HS EGY L WS G L +G
Sbjct: 212 WSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATG-- 269
Query: 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259
D ++ NA+ + Q FK H VED+ W E +F S DQ + IWD+R
Sbjct: 270 DCNNSIFVTNASESTWKTDT-QAFKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRK 328
Query: 260 PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR--KISTALHTFDSHK 317
P KP +V AH ++VN ++++ E++L +G D + +++DLR K ++ + F H
Sbjct: 329 P---KPAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDNSPVSDFKYHT 385
Query: 318 EEVFQVGWNPKNETILASCCLGRRLMVWDLSRID--EEQT-----PEDAEDGPPELLFIH 370
+ + WNP E+ + ++ +WD S + EE T P+D PP+L FIH
Sbjct: 386 GPITSIEWNPYEESQVIVSSSDDQVTIWDFSLEEDTEEFTNANANPDDDFQYPPQLFFIH 445
Query: 371 GGHTSKISDFSWNP 384
G I + W+P
Sbjct: 446 QGQHD-IKEVHWHP 458
Score = 153 (58.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 57/218 (26%), Positives = 100/218 (45%)
Query: 198 SDDAQICLWDI-N--AAPKNKSLEAMQIFKVH---EGVVEDVA--WHLRHEYLFGSVGD- 248
SD+ + +W+I N A N+++ Q +H +E A W + + GD
Sbjct: 213 SDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLAT-GDC 271
Query: 249 DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST 308
+ + + + + Q+ H V + ++P E + A+ S D+TV+++D+RK
Sbjct: 272 NNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPKP 331
Query: 309 ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLF 368
A+ T +H +V + W+ E +L S C VWDL R ++ +P D F
Sbjct: 332 AI-TVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDL-RAFKDNSP--VSD------F 381
Query: 369 IHGGHTSKISDFSWNPCED-WVISSVAEDNILQIWQMA 405
+ HT I+ WNP E+ VI S ++D + IW +
Sbjct: 382 KY--HTGPITSIEWNPYEESQVIVSSSDDQVT-IWDFS 416
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 113/410 (27%), Positives = 185/410 (45%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
+++ Y WK P LYD + H L WPSL+ W P E+ K Q++ L T+ +
Sbjct: 54 VDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSK---TQRLYLSEQTNGSV 110
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ 136
PN L++A + ++ N+ H + + G+V I+++ + ++ A +
Sbjct: 111 PNTLVIANCET-VNRQLNEKAHSPFVKK-YKTI-IHPGEVNRIRELPQNSKIV-ATHTDS 166
Query: 137 NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG-YGLSWSKFKEGHLL 195
LI + Y P D PDL L GH + + L+ E +L
Sbjct: 167 PDILIWNTETQPDRYAV-----LGAP--DSR--PDLLLIGHQDDAEFALAMCP-TEPFVL 216
Query: 196 SGSDDAQICLWDIN-----AAPKNKS-------------------LEAMQIFKVHEGVVE 231
SG D + LW+I A +KS + I+ H+ VE
Sbjct: 217 SGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNGHKDTVE 276
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
DVA+ F SVGDD L++WD RT S ++ AH ++++C+ +NP + ++ T
Sbjct: 277 DVAFCPSSAQEFCSVGDDSCLMLWDART-GTSPAMKVEKAHDADLHCVDWNPHDNNLILT 335
Query: 292 GSTDKTVKLFDLRKIST-----ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
GS D TV++FD R +++ ++ F+ H+ V V W+P ++ S L +WD
Sbjct: 336 GSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 395
Query: 347 LSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396
R+ ++ E A P L F H GH K+ DF W+ W I SV+++
Sbjct: 396 CDRVGKKS--ERATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDN 443
Score = 318 (117.0 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 69/206 (33%), Positives = 111/206 (53%)
Query: 222 IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281
I+ H+ VEDVA+ F SVGDD L++WD RT S ++ AH ++++C+ +
Sbjct: 267 IYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDART-GTSPAMKVEKAHDADLHCVDW 325
Query: 282 NPFNEWILATGSTDKTVKLFDLRKIST-----ALHTFDSHKEEVFQVGWNPKNETILASC 336
NP + ++ TGS D TV++FD R +++ ++ F+ H+ V V W+P ++ S
Sbjct: 326 NPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSS 385
Query: 337 CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396
L +WD R+ ++ E A P L F H GH K+ DF W+ W I SV+++
Sbjct: 386 AEDGLLNIWDCDRVGKKS--ERATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDN 443
Query: 397 -------NILQIWQMAENIYHDEDDL 415
LQIW+M++ IY ED++
Sbjct: 444 CESIGGGGTLQIWRMSDLIYRPEDEV 469
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 108/347 (31%), Positives = 157/347 (45%)
Query: 90 DDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAE 149
D+ E+D D D D G +Q+ +++ H G VNR R MPQN + + S
Sbjct: 126 DEDEDDEDDSDSDDDD-GDEASKTPNIQV-RRVAHHGCVNRIRAMPQNSHICVSWADSGH 183
Query: 150 VYVFDYSKH-----PSKPP-LDGAC-----SPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198
V V+D S H S+ DG +P + GH EGY + WS G LLSG
Sbjct: 184 VQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGD 243
Query: 199 DDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
+ I LW+ P + S I F H VED+ W E +F S D + +WD+
Sbjct: 244 CKSMIHLWE----PASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI 299
Query: 258 RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS---TALHTFD 314
R P S AH ++VN +++N +LA+GS D T + DLR I + F+
Sbjct: 300 RLGK--SPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFE 357
Query: 315 SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-RIDEE-------QTPE---DAEDGP 363
HK + + W+ + LA +L +WDLS DEE QT E +D P
Sbjct: 358 YHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLP 417
Query: 364 PELLFIHGGHTSKISDFSW-NPCEDWVISSVAED-NILQIWQMAENI 408
P+LLF+H G + + W N +IS+ + NIL + + +
Sbjct: 418 PQLLFVHQGQKD-LKELHWHNQIPGMIISTAGDGFNILMPYNIQNTL 463
>UNIPROTKB|Q5JNZ6 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0000122 HOGENOM:HOG000160330 EMBL:AL929302 UniGene:Hs.495755
HGNC:HGNC:9890 ChiTaRS:RBBP7 SMR:Q5JNZ6 Ensembl:ENST00000425696
Uniprot:Q5JNZ6
Length = 85
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 59/72 (81%), Positives = 66/72 (91%)
Query: 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQI 401
L VWDLS+I EEQ+ EDAEDGPPELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+QI
Sbjct: 1 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQI 60
Query: 402 WQMAENIYHDED 413
WQMAENIY+DE+
Sbjct: 61 WQMAENIYNDEE 72
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 327 (120.2 bits), Expect = 3.6e-29, P = 3.6e-29
Identities = 114/407 (28%), Positives = 183/407 (44%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPDREEPPGKDY-SVQKMILGTHTSENEPNYLMLAQVQ- 86
P +Y+++ L WP LTV+ L D + Y + + T ++ + N L+ +
Sbjct: 120 PTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAMKASS 179
Query: 87 ----LPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ----NP 138
L D++E D DDD D + + I + H NR R P
Sbjct: 180 LAKTLVKDENEEDEEDEDDD-DDVDSDPILDSE-SI--PLRHT--TNRIRVSPHAQQTGE 233
Query: 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR------LRGH-STEGYGLSWSKF-K 190
+L A+ + + EVY+FD S G P +R H + EGYGL WS
Sbjct: 234 YLTASMSENGEVYIFDLSAQYKAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVN 293
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LLSG +I L N + + + F + +ED+ W +F + G D
Sbjct: 294 TGALLSGDMSGRIYL--TNRTTSSWTTDKTPFF-ASQSSIEDIQWSTGETTVFATGGCDG 350
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS--- 307
Y+ IWD R+ KP SV+A +S+VN ++++ +LA+G D + ++DLR +
Sbjct: 351 YIRIWDTRSKK-HKPALSVIASKSDVNVISWSSKINHLLASGHDDGSWGVWDLRNFTNNT 409
Query: 308 ----TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS--RIDEE--QTPEDA 359
+ + +D HK + + +NP +E+I+A + +WDL+ DEE Q ++A
Sbjct: 410 TSNPSPVANYDFHKSPITSISFNPLDESIIAVSSEDNTVTLWDLAVEADDEEISQQRKEA 469
Query: 360 E---DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
+ D PP+LLF+H K D W+P + S D L IW+
Sbjct: 470 QELHDIPPQLLFVHWQRDVK--DVRWHPQIPGCLVSTGGDG-LNIWK 513
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 327 (120.2 bits), Expect = 3.6e-29, P = 3.6e-29
Identities = 114/407 (28%), Positives = 183/407 (44%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPDREEPPGKDY-SVQKMILGTHTSENEPNYLMLAQVQ- 86
P +Y+++ L WP LTV+ L D + Y + + T ++ + N L+ +
Sbjct: 120 PTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAMKASS 179
Query: 87 ----LPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ----NP 138
L D++E D DDD D + + I + H NR R P
Sbjct: 180 LAKTLVKDENEEDEEDEDDD-DDVDSDPILDSE-SI--PLRHT--TNRIRVSPHAQQTGE 233
Query: 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR------LRGH-STEGYGLSWSKF-K 190
+L A+ + + EVY+FD S G P +R H + EGYGL WS
Sbjct: 234 YLTASMSENGEVYIFDLSAQYKAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVN 293
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LLSG +I L N + + + F + +ED+ W +F + G D
Sbjct: 294 TGALLSGDMSGRIYL--TNRTTSSWTTDKTPFF-ASQSSIEDIQWSTGETTVFATGGCDG 350
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS--- 307
Y+ IWD R+ KP SV+A +S+VN ++++ +LA+G D + ++DLR +
Sbjct: 351 YIRIWDTRSKK-HKPALSVIASKSDVNVISWSSKINHLLASGHDDGSWGVWDLRNFTNNT 409
Query: 308 ----TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS--RIDEE--QTPEDA 359
+ + +D HK + + +NP +E+I+A + +WDL+ DEE Q ++A
Sbjct: 410 TSNPSPVANYDFHKSPITSISFNPLDESIIAVSSEDNTVTLWDLAVEADDEEISQQRKEA 469
Query: 360 E---DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
+ D PP+LLF+H K D W+P + S D L IW+
Sbjct: 470 QELHDIPPQLLFVHWQRDVK--DVRWHPQIPGCLVSTGGDG-LNIWK 513
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 316 (116.3 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 111/405 (27%), Positives = 189/405 (46%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTS-----ENEPNYLMLA 83
P +Y+++ + WP LT++ +PD ++Y Q ++L T T ENE L L+
Sbjct: 115 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYP-QSILLTTATQSSRKKENELMVLALS 173
Query: 84 QVQLPL--DDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLI 141
+ L DD+E + +DD D N + + N +V+ Q L
Sbjct: 174 NLAKTLLKDDNEGEDDE-EDDEDDVDPV-IENENIPLRDTTNRL-KVSPFAISNQE-VLT 229
Query: 142 ATKTVSAEVYVFDY---SKHPSKPPLD---GACSPDLRLRGH-STEGYGLSWSKF-KEGH 193
AT + + +VY+++ SK S P A P ++ H + EGYGL WS K G
Sbjct: 230 ATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIKTGA 289
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV-VEDVAWHLRHEYLFGSVGDDQYL 252
LLSG QI + + + + Q F V +ED+ W +F + G D Y+
Sbjct: 290 LLSGDCSGQIYFTQRHTS---RWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYI 346
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA--- 309
IWD R+ KP SV A ++VN ++++ ++LA+G + T ++DLR+ + +
Sbjct: 347 RIWDTRSKK-HKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNAD 405
Query: 310 ----LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-RIDEEQTPEDA----- 359
+ +D HK + + +NP +E+I+A + +WDLS D+E+ + A
Sbjct: 406 AVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKE 465
Query: 360 -EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
++ PP+LLF+H ++ D W+ + S D L +W+
Sbjct: 466 LQEIPPQLLFVHW--QKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 507
>UNIPROTKB|C9JPP3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 IPI:IPI00974561 ProteinModelPortal:C9JPP3 SMR:C9JPP3
STRING:C9JPP3 Ensembl:ENST00000445722 ArrayExpress:C9JPP3
Bgee:C9JPP3 Uniprot:C9JPP3
Length = 87
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 50/88 (56%), Positives = 70/88 (79%)
Query: 36 ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95
+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ D
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFD 59
Query: 96 ARHYDDDRSDFGGFGCANGKVQIIQQIN 123
A HYD ++ +FGGFG +GK++I +IN
Sbjct: 60 ASHYDSEKGEFGGFGSVSGKIEIEIKIN 87
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 299 (110.3 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 102/383 (26%), Positives = 175/383 (45%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILG----THTSENEPNYLMLAQ 84
P +Y+++ ++WP L+ + L D + + Q ++G +++NE + L+Q
Sbjct: 91 PSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKLSQ 150
Query: 85 VQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM--PQNPF--- 139
+ D +DA D SD + + I+ G NR R P N
Sbjct: 151 LYKTQHDENDDA----SDNSDV-----EEDPILEHKSISTKGACNRVRSARRPANSSKES 201
Query: 140 LIATKTVSAEVYVFDYSKHPSKPPLDGAC------SPDLRLRGHSTEGYGLSWSKFKEGH 193
L+A+ + +V+++D + H G SP + H TEGY L WS F E
Sbjct: 202 LLASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSPF-EYS 260
Query: 194 LLSGSDDAQICLWDI-NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
LLSG + +I L N + S F H VED+ W + +F S D
Sbjct: 261 LLSGDNANEIFLTKYSNGGWQTDSSP----FLSHTAAVEDLQWSPSEKNVFSSCSCDGTF 316
Query: 253 LIWDLRTPSVSKPVQSVVAHQS-EVNCLAFNPFNEWILATGSTDKTVKLFDLRK------ 305
IWD+R + + +V AH +VN L++N +LATG+ + ++DLR
Sbjct: 317 RIWDVRNKQKTSAL-TVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSSSS 375
Query: 306 ISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-RIDEEQTPEDAEDG-- 362
++T + +F H+ ++ + W+P ++++ ++ +WDLS +DEE+ A +G
Sbjct: 376 VATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQ 435
Query: 363 --PPELLFIHGGHTSKISDFSWN 383
PP+L+FIH G +I + W+
Sbjct: 436 DVPPQLMFIHMGQ-QEIKEMHWH 457
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 59/241 (24%), Positives = 104/241 (43%)
Query: 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEA----------MQIFKVHEGVVEDVA--WH- 236
KE L S + ++ +WDI AP +SL++ ++ V+ E A W
Sbjct: 199 KESLLASFHETGKVHIWDI--APHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSP 256
Query: 237 LRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
+ L G ++ +L + + S P S H + V L ++P + + ++ S D
Sbjct: 257 FEYSLLSGDNANEIFLTKYSNGGWQTDSSPFLS---HTAAVEDLQWSPSEKNVFSSCSCD 313
Query: 296 KTVKLFDLR-KISTALHTFDSHKE-EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
T +++D+R K T+ T ++H +V + WN + +LA+ VWDL +
Sbjct: 314 GTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSS 373
Query: 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 413
+ P F H + I W+P ED VI V DN + +W ++ + +E
Sbjct: 374 SSV-----ATPVASF--KWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQ 426
Query: 414 D 414
D
Sbjct: 427 D 427
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 96/371 (25%), Positives = 166/371 (44%)
Query: 43 PSLTVEWLPDREEPPGKDYSVQKMIL-GTHTSENEPNYLMLAQVQ-LPLDDSENDARHYD 100
P L+ + + D E + + + ++ GT N L++ ++ L + + D
Sbjct: 75 PCLSFDVVLDGEGDRREQFPLSMVLCAGTQADTALSNRLIVMRMHNLQGTEKKKDEDKSS 134
Query: 101 DDRSDFGGFG-CANGKVQI-IQQINHDGEVNRARYMPQNP-FLIATKTVSAEVYVFDY-- 155
D+ SD + K Q+ + + H G +NR R + L A + +V +FD
Sbjct: 135 DEESDEDEDDEDEDKKPQLELAMMPHYGGINRVRVTQRGEQTLAAVWSEKGQVEIFDLRL 194
Query: 156 ---SKHPSKP-----PLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD 207
+ H S + +P GH +EG+ + WS G ++SG I +W+
Sbjct: 195 QLEAVHNSTAMSAFIKQEKEATPLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWE 254
Query: 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267
K ++ + F H VED+ W +F S DQ + IWD+R P S +
Sbjct: 255 PQEGGTWK-ID-QRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSM-LS 311
Query: 268 SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA--LHTFDSHKEEVFQVGW 325
+ AH S+VN +++N +IL+ G D +K++DLR+ + + +F H V V W
Sbjct: 312 ANEAHSSDVNVISWNRTEPFILS-GGDDGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQW 370
Query: 326 NPKNETILASCCLGRRLMVWDLS--RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383
+P + ++ A+ + WDLS D ED + PP+LLF+H G ++ + W+
Sbjct: 371 SPVDSSVFAASGADDVISQWDLSVESCDMGGQAEDVKQLPPQLLFLHQGQ-KEVKELHWH 429
Query: 384 PCEDWVISSVA 394
P V+ S A
Sbjct: 430 PQIPGVLISTA 440
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 52/196 (26%), Positives = 81/196 (41%)
Query: 158 HPSKPPLDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKS 216
H +P G D R HS L WS + S S D I +WDI A P N
Sbjct: 251 HVWEPQEGGTWKIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPP-NSM 309
Query: 217 LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
L A + H V ++W+ ++ S GDD L +WDLR +PV S H + V
Sbjct: 310 LSANE---AHSSDVNVISWNRTEPFIL-SGGDDGLLKVWDLRQFQSGRPVASFKQHSAPV 365
Query: 277 NCLAFNPFNEWILATGSTDKTVKLFDL--------------RKISTALHTFDSHKEEVFQ 322
+ ++P + + A D + +DL +++ L ++EV +
Sbjct: 366 TSVQWSPVDSSVFAASGADDVISQWDLSVESCDMGGQAEDVKQLPPQLLFLHQGQKEVKE 425
Query: 323 VGWNPKNETILASCCL 338
+ W+P+ +L S L
Sbjct: 426 LHWHPQIPGVLISTAL 441
Score = 144 (55.7 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 34/145 (23%), Positives = 70/145 (48%)
Query: 265 PVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST---ALHTFDSHKEEVF 321
P+ S H SE + ++P + +G K + +++ ++ T F SH + V
Sbjct: 217 PLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWKIDQRPFSSHSKSVE 276
Query: 322 QVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFS 381
+ W+P T+ ASC + + + +WD+ + P P +L + H+S ++ S
Sbjct: 277 DLQWSPTEATVFASCSVDQSIRIWDI------RAP------PNSMLSANEAHSSDVNVIS 324
Query: 382 WNPCEDWVISSVAEDNILQIWQMAE 406
WN E +++S +D +L++W + +
Sbjct: 325 WNRTEPFILSG-GDDGLLKVWDLRQ 348
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 31/136 (22%), Positives = 65/136 (47%)
Query: 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI-STALHTFDSHKEEVFQVGWNPKN 329
+H V L ++P + A+ S D++++++D+R ++ L ++H +V + WN
Sbjct: 270 SHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNRTE 329
Query: 330 ETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV 389
IL+ G L VWDL + + G P F H++ ++ W+P + V
Sbjct: 330 PFILSGGDDGL-LKVWDLRQF---------QSGRPVASFKQ--HSAPVTSVQWSPVDSSV 377
Query: 390 ISSVAEDNILQIWQMA 405
++ D+++ W ++
Sbjct: 378 FAASGADDVISQWDLS 393
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 272 (100.8 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 89/347 (25%), Positives = 148/347 (42%)
Query: 69 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGE 127
GT + N LM+ ++ + + DDD D K Q+ + + H G
Sbjct: 92 GTQAESAQSNRLMMLRMHNLHGTRPSPSEGSDDDEEDEDEEDEEEQKPQLELAMVPHYGG 151
Query: 128 VNRAR--YMPQNPFL-IATKTVSAEVY----VFDYSKHPSKPPL-----DGACSPDLRLR 175
+NR R ++ + P + ++ EV+ + P + P
Sbjct: 152 INRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALAIFLRDEQARIKPIFSFA 211
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVA 234
GH EG+ L WS G LL+G + LW + S Q F H VED+
Sbjct: 212 GHMGEGFALDWSPRVPGRLLTGDCQKNVHLW---TPTEGGSWNVDQRPFVGHTRSVEDLQ 268
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
W + +F S D + IWD+R P + + + AH +VN ++++ E L +G
Sbjct: 269 WSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSR-REPFLLSGG 327
Query: 294 TDKTVKLFDLR--KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-RI 350
D +K++DLR K + + TF H V V W+P++ + A+ ++ WDL+
Sbjct: 328 DDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVER 387
Query: 351 DEEQTPEDAEDG----PPELLFIHGGHTSKISDFSWNP-CEDWVISS 392
D E + + G P +LLF+H G T + + W+P C +IS+
Sbjct: 388 DPESGETETDPGLAALPQQLLFVHQGETD-LKELHWHPQCPGVLIST 433
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 270 (100.1 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 90/347 (25%), Positives = 148/347 (42%)
Query: 69 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGE 127
GT + N LM+ ++ L + DD D K Q+ + + H G
Sbjct: 92 GTQAESAQSNRLMMLRMH-NLHGTRPPPSEGSDDEDDEDEEDEEERKPQLELAMVPHYGG 150
Query: 128 VNRAR--YMPQNPFL-IATKTVSAEVY----VFDYSKHPSKPPL-----DGACSPDLRLR 175
+NR R ++ + P + ++ EV+ + P + P
Sbjct: 151 INRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALAIFLRDEQARVKPIFSFA 210
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD-INAAPKNKSLEAMQIFKVHEGVVEDVA 234
GH EG+ L WS G LL+G I LW + N + F H VED+
Sbjct: 211 GHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVD---QRPFVGHTRSVEDLQ 267
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
W + +F S D + IWD+R P + + + AH +VN ++++ E L +G
Sbjct: 268 WSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSR-REPFLLSGG 326
Query: 294 TDKTVKLFDLR--KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-RI 350
D T+K++DLR K + + TF H V V W+P++ + A+ ++ WDL+
Sbjct: 327 DDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVER 386
Query: 351 DEEQTPEDAEDG----PPELLFIHGGHTSKISDFSWNP-CEDWVISS 392
D E + + G P +LLF+H G T + + W+P C +IS+
Sbjct: 387 DPESGETETDPGLAALPQQLLFVHQGETD-LKELHWHPQCPGVLIST 432
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 265 (98.3 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 92/354 (25%), Positives = 152/354 (42%)
Query: 69 GTHTSENEPNYLMLAQV------QLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQ 121
GT ++ N LM+ ++ + P + +D DD+ + K Q+ +
Sbjct: 92 GTQAESSQSNRLMMLRMHNLHGTKPPPPEGSDDEEEEDDEEDE------EERKPQLELAM 145
Query: 122 INHDGEVNRAR--YMPQNPFL-IATKTVSAEVYVFDYSKHPSKPPLDGAC---------S 169
+ H G +NR R ++ + P + ++ EV+ P A
Sbjct: 146 VPHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALATFLRDEQTRMK 205
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEG 228
P GH EG+ L WS G LL+G I LW S Q F H
Sbjct: 206 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLW---TPTDGGSWHVDQRPFVGHTR 262
Query: 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVNCLAFNPFNEW 287
VED+ W + +F S D + IWD+R PS + + + AH +VN + ++ E
Sbjct: 263 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWS-HREP 321
Query: 288 ILATGSTDKTVKLFDLR--KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
L +G D +K++DLR K + + TF H V V W+P++ + A+ ++ W
Sbjct: 322 FLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQW 381
Query: 346 DLSRIDEEQTPEDAE------DGPPELLFIHGGHTSKISDFSWNP-CEDWVISS 392
DL+ ++ + DAE D P +LLF+H G T + + W+P C ++S+
Sbjct: 382 DLA-VERDPEAGDAETDPGLADLPQQLLFVHQGETD-LKELHWHPQCPGVLVST 433
Score = 116 (45.9 bits), Expect = 0.00083, P = 0.00083
Identities = 35/139 (25%), Positives = 64/139 (46%)
Query: 270 VAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI-STA--LHTFDSHKEEVFQVGWN 326
V H V L ++P + + A+ S D +++++D+R S A L T +H +V + W+
Sbjct: 258 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWS 317
Query: 327 PKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCE 386
+ +L+ G L VWDL + + G P F H + ++ W+P +
Sbjct: 318 HREPFLLSGGDDGA-LKVWDLRQF---------KSGSPVATFKQ--HVAPVTSVEWHPQD 365
Query: 387 DWVISSVAEDNILQIWQMA 405
V ++ DN + W +A
Sbjct: 366 SGVFAASGADNQITQWDLA 384
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 264 (98.0 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 92/352 (26%), Positives = 150/352 (42%)
Query: 69 GTHTSENEPNYLMLAQVQ-----LPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQI 122
GT + N LM+ ++ P +D ++D D K Q+ + +
Sbjct: 92 GTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDE-----EERKPQLELAMV 146
Query: 123 NHDGEVNRAR--YMPQNPFL-IATKTVSAEVYVFDYSKHPSKPPLDGAC---------SP 170
H G +NR R ++ + P + ++ EV+ + P A P
Sbjct: 147 PHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQAQMKP 206
Query: 171 DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGV 229
GH EG+ L WS G LL+G I LW S Q F H
Sbjct: 207 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLW---TPTDGGSWHVDQRPFVGHTRS 263
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVNCLAFNPFNEWI 288
VED+ W +F S D + IWD+R PS + + + AH +VN ++++ E
Sbjct: 264 VEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSR-REPF 322
Query: 289 LATGSTDKTVKLFDLR--KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
L +G D +K++DLR K + + TF H V V W+P++ + A+ ++ WD
Sbjct: 323 LLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWD 382
Query: 347 LS-RIDEEQTPEDAEDG----PPELLFIHGGHTSKISDFSWNP-CEDWVISS 392
L+ D E +A+ G P +LLF+H G T ++ + W+P C ++S+
Sbjct: 383 LAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLVST 433
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 263 (97.6 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 87/324 (26%), Positives = 140/324 (43%)
Query: 90 DDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ-NPFLIATKTVSA 148
+D + D +DD+ D + H G VNR R N A+ +
Sbjct: 126 NDGDED-EELEDDQDDVTDREELKKPQMTCALVKHQGCVNRVRARRLGNSVYAASWSELG 184
Query: 149 EVYVFDYSK--------HPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200
V ++D ++ +K P GH EG+ + WS +G L +G
Sbjct: 185 RVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCR 244
Query: 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR-T 259
I +W ++ + H VED+ W + S D+ + IWD R +
Sbjct: 245 RDIHVWT-PVEDGTWKVDQRPLAG-HSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRAS 302
Query: 260 PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA--LHTFDSHK 317
P + + AHQS+VN +++N NE +A+G D + ++DLR+ + + TF H
Sbjct: 303 PQKACMLTCEDAHQSDVNVISWNR-NEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHT 361
Query: 318 EEVFQVGWNPKNETILASCCLGRRLMVWDLS---RIDEEQTPEDAEDG----PPELLFIH 370
+ + V W+P T+LAS ++ +WDL+ ID+ P ED PP+LLFIH
Sbjct: 362 DHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIH 421
Query: 371 GGHTSKISDFSWNPCEDWVISSVA 394
G +I + W+P V+ S A
Sbjct: 422 QGQ-KEIKELHWHPQLPGVLLSTA 444
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 60/245 (24%), Positives = 108/245 (44%)
Query: 168 CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-- 225
C +R R Y SWS+ ++ + Q + + A + + EA +F
Sbjct: 162 CVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQ-AVENAQLAKQYEQSEARPVFTFGG 220
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQY-LLIWDLRTPSVSKPVQSVVA-HQSEVNCLAFNP 283
H+ + W + + + GD + + +W K Q +A H V L ++P
Sbjct: 221 HQQEGFAIDWSPSADGVLAT-GDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSP 279
Query: 284 FNEWILATGSTDKTVKLFDLR---KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR 340
+LA+ S DKT++++D R + + L D+H+ +V + WN +NE +AS
Sbjct: 280 NERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWN-RNEPFIASGGDDG 338
Query: 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQ 400
L +WDL + ++ P F H HT I+ W+P E V++S +D+ +
Sbjct: 339 YLHIWDLRQFQSKK---------PIATFKH--HTDHITTVEWSPAEATVLASGGDDDQIA 387
Query: 401 IWQMA 405
+W +A
Sbjct: 388 LWDLA 392
Score = 135 (52.6 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 36/149 (24%), Positives = 68/149 (45%)
Query: 261 SVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST---ALHTFDSHK 317
S ++PV + HQ E + ++P + +LATG + + ++ + T H
Sbjct: 210 SEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPLAGHS 269
Query: 318 EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKI 377
+ V + W+P ++LASC + + + +WD +P+ A +L H S +
Sbjct: 270 QSVEDLQWSPNERSVLASCSVDKTIRIWDC-----RASPQKAC-----MLTCEDAHQSDV 319
Query: 378 SDFSWNPCEDWVISSVAEDNILQIWQMAE 406
+ SWN E ++ S +D L IW + +
Sbjct: 320 NVISWNRNEPFIASG-GDDGYLHIWDLRQ 347
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 242 (90.2 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 64/229 (27%), Positives = 112/229 (48%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + W+ + ++GS D I +W+ P+ ++SL+ F+ H + W
Sbjct: 103 HTKEVYSVDWNLVTKDTFITGSWDQSIKIWN----PRMDRSLKT---FREHRYCIYSAIW 155
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
R+ +LF SV D+ L IWD R ++ + ++ AH E+ +N +N+ + TGS D
Sbjct: 156 SPRNAHLFASVSGDRTLKIWDSRD---NRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVD 212
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT 355
KT++++D+R H V ++ +P +E++LASC ++VWD +R EQ
Sbjct: 213 KTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAR---EQD 269
Query: 356 PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
P A H HT + WN D ++S + D + +W +
Sbjct: 270 PIIAR-------MDH--HTEFVVGLDWNMFIDGQMASCSWDEQVCVWNL 309
Score = 190 (71.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 45/174 (25%), Positives = 87/174 (50%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEY 241
Y +WS+ E H+ S S D I +WD A + +++ F+ H V V W+L +
Sbjct: 62 YDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKS---FEEHTKEVYSVDWNLVTKD 118
Query: 242 LFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLF 301
F + DQ + IW+ P + + +++ H+ + ++P N + A+ S D+T+K++
Sbjct: 119 TFITGSWDQSIKIWN---PRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIW 175
Query: 302 DLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT 355
D R + +L+T +H E+ WN N+ + + + + + +WD+ D T
Sbjct: 176 DSRD-NRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTT 228
Score = 183 (69.5 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 50/191 (26%), Positives = 88/191 (46%)
Query: 214 NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ 273
++ + A + F +G+ D W +E S D + IWD + PS +P++S H
Sbjct: 46 DRDIGAFKTFDTRDGLY-DCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHT 104
Query: 274 SEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETIL 333
EV + +N + TGS D+++K+++ R + +L TF H+ ++ W+P+N +
Sbjct: 105 KEVYSVDWNLVTKDTFITGSWDQSIKIWNPR-MDRSLKTFREHRYCIYSAIWSPRNAHLF 163
Query: 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSV 393
AS R L +WD SR + A D H +I WN D + +
Sbjct: 164 ASVSGDRTLKIWD-SRDNRSLNTIKAHD--------H-----EILTCDWNKYNDKEVVTG 209
Query: 394 AEDNILQIWQM 404
+ D ++IW +
Sbjct: 210 SVDKTIRIWDI 220
Score = 161 (61.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 50/172 (29%), Positives = 83/172 (48%)
Query: 182 YGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH- 239
Y WS + HL + S D + +WD + N+SL + K H+ + W+ +
Sbjct: 151 YSAIWSP-RNAHLFASVSGDRTLKIWD---SRDNRSLNTI---KAHDHEILTCDWNKYND 203
Query: 240 -EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTV 298
E + GSV D+ + IWD+R P +P + H V + +P +E +LA+ S D +V
Sbjct: 204 KEVVTGSV--DKTIRIWDIRYPD--RPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSV 259
Query: 299 KLFD-LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
++D R+ + D H E V + WN + +ASC ++ VW+L R
Sbjct: 260 IVWDRAREQDPIIARMDHHTEFVVGLDWNMFIDGQMASCSWDEQVCVWNLGR 311
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 34/155 (21%), Positives = 74/155 (47%)
Query: 255 WD----LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
WD + P + + +++ H+ + ++P N + A+ S D+T+K++D R + +L
Sbjct: 125 WDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRD-NRSL 183
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+T +H E+ WN N+ + + + + + +WD+ + P D P +L
Sbjct: 184 NTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDI------RYP----DRPTTIL--- 230
Query: 371 GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
GHT + +P + +++S + D + +W A
Sbjct: 231 RGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRA 265
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 260 (96.6 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 74/268 (27%), Positives = 130/268 (48%)
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDG------ACSPDLRLRGHSTEGYGLSWSK 188
PQ + AT +++V + D + H + + G A P LR H +EGY L WS
Sbjct: 208 PQT--ITATMLENSQVVIHDVTPHLTSFDVPGTMLPPSASKPLSTLRMHKSEGYALDWSP 265
Query: 189 FKE-GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG 247
G LL+G +D I + + + F+ H VE++ W + +F S
Sbjct: 266 LHPLGKLLTGDNDGLIYV--TTRTEGGGWVTDTRAFRGHASSVEELQWSPNEKNVFASAS 323
Query: 248 DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRK-- 305
D + +WD+R+ S S P +V ++VN + ++ +LATG+ D ++DLR
Sbjct: 324 SDGTVKVWDVRSKSRS-PAVNVKISNTDVNVMTWSKQTSHLLATGADDGQWAVWDLRHWK 382
Query: 306 ---ISTA------LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-RIDEEQT 355
S+A + +F+ HKE + + W+P +++++A + +WDL+ +DEE++
Sbjct: 383 PNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVIAVGSADNTVTLWDLAVELDEEES 442
Query: 356 PEDA-EDGPPELLFIHGGHTSKISDFSW 382
E D PP+LLF+H + + + W
Sbjct: 443 REAGLADVPPQLLFVH--YMESVKEVHW 468
Score = 210 (79.0 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 79/295 (26%), Positives = 127/295 (43%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPD-----REEPPGKDYSVQ-KMILGTHTSENEPNYLML 82
P YD++ T + WP L+ + + D R+ P Y+V G ENE L L
Sbjct: 93 PSTYDMLHTLSTPWPCLSFDIVRDTLGDNRKTYPATVYAVTGTQAEGRRAKENELMVLKL 152
Query: 83 AQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIA 142
+ + ++E D+ DD D GG K I + RA PQ+
Sbjct: 153 SGLGKMERENETDSESDSDD--DEGGEAILEHK-SI--PLGSTANRIRAHQTPQSDITKP 207
Query: 143 TKTVSA------EVYVFDYSKHPSKPPLDG------ACSPDLRLRGHSTEGYGLSWSKFK 190
+T++A +V + D + H + + G A P LR H +EGY L WS
Sbjct: 208 PQTITATMLENSQVVIHDVTPHLTSFDVPGTMLPPSASKPLSTLRMHKSEGYALDWSPLH 267
Query: 191 E-GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
G LL+G +D I + + + F+ H VE++ W + +F S D
Sbjct: 268 PLGKLLTGDNDGLIYV--TTRTEGGGWVTDTRAFRGHASSVEELQWSPNEKNVFASASSD 325
Query: 250 QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
+ +WD+R+ S S P +V ++VN + ++ +LATG+ D ++DLR
Sbjct: 326 GTVKVWDVRSKSRS-PAVNVKISNTDVNVMTWSKQTSHLLATGADDGQWAVWDLR 379
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 51/203 (25%), Positives = 89/203 (43%)
Query: 214 NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS--KPVQSVVA 271
+K L +++ K EG D W H GD+ L+ RT ++
Sbjct: 245 SKPLSTLRMHK-SEGYALD--WSPLHPLGKLLTGDNDGLIYVTTRTEGGGWVTDTRAFRG 301
Query: 272 HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIST--ALHTFDSHKEEVFQVGWNPKN 329
H S V L ++P + + A+ S+D TVK++D+R S A++ S+ + V + W+ +
Sbjct: 302 HASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTD-VNVMTWSKQT 360
Query: 330 ETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV 389
+LA+ + VWDL + P F H I+ W+P +D V
Sbjct: 361 SHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASF--NFHKEPITSIEWHPTDDSV 418
Query: 390 ISSVAEDNILQIWQMAENIYHDE 412
I+ + DN + +W +A + +E
Sbjct: 419 IAVGSADNTVTLWDLAVELDEEE 441
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 258 (95.9 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 68/232 (29%), Positives = 108/232 (46%)
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
P GH EG+ L WS G LL+G I LW + F H
Sbjct: 205 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLW--TPTDSGSWHVDQRPFVGHTRS 262
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVNCLAFNPFNEWI 288
VED+ W + +F S D + IWD+R PS + + + AH +VN ++++ E
Sbjct: 263 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSR-QEPF 321
Query: 289 LATGSTDKTVKLFDLR--KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
L +G D +K++DLR K + + TF H V V W+P++ + A+ ++ WD
Sbjct: 322 LLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWD 381
Query: 347 LS-RIDEEQTPEDAEDG----PPELLFIHGGHTSKISDFSWNP-CEDWVISS 392
L+ D E + + G P +LLF+H G T + + W+P C ++S+
Sbjct: 382 LAVERDPEAGDTETDPGLVGLPQQLLFVHQGETD-LKELHWHPQCPGVLVST 432
Score = 164 (62.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 44/143 (30%), Positives = 65/143 (45%)
Query: 163 PLD-GACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM 220
P D G+ D R GH+ L WS ++ S S DA I +WDI AAP + +
Sbjct: 243 PTDSGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACM--L 300
Query: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280
H G V ++W + +L S GDD L +WDLR PV + H + V +
Sbjct: 301 TTPAAHNGDVNVISWSRQEPFLL-SGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVE 359
Query: 281 FNPFNEWILATGSTDKTVKLFDL 303
++P + + A D + +DL
Sbjct: 360 WHPQDSGVFAASGADNQITQWDL 382
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/136 (28%), Positives = 62/136 (45%)
Query: 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG 181
+ H V ++ P + A+ + A + ++D PSK AC H+ +
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSK-----ACMLTTPA-AHNGDV 310
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEY 241
+SWS+ +E LLSG DD + +WD+ + KS + FK H V V WH +
Sbjct: 311 NVISWSR-QEPFLLSGGDDGALKVWDLR---QFKSGSPVATFKQHVAPVTSVEWHPQDSG 366
Query: 242 LFGSVGDDQYLLIWDL 257
+F + G D + WDL
Sbjct: 367 VFAASGADNQITQWDL 382
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 40/165 (24%), Positives = 65/165 (39%)
Query: 246 VGDDQYLLIWDLRTPSVS-KPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLF--- 301
V DD L LR KP+ + H E L ++P L TG K + L+
Sbjct: 185 VVDDPQALATFLRDEQARVKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPT 244
Query: 302 DLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361
D F H V + W+P +T+ ASC + +WD+ P A
Sbjct: 245 DSGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDI-----RAAPSKAC- 298
Query: 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
+L H ++ SW+ E +++S +D L++W + +
Sbjct: 299 ----MLTTPAAHNGDVNVISWSRQEPFLLSG-GDDGALKVWDLRQ 338
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 257 (95.5 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 89/348 (25%), Positives = 146/348 (41%)
Query: 69 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGE 127
GT + N LM+ ++ L + DD + + K Q+ + + H G
Sbjct: 87 GTQAESAQSNRLMMLRMH-NLHGIKPPPSEGSDDEEEEDEEDEEDRKPQLELAMVPHYGG 145
Query: 128 VNRAR--YMPQNPFL-IATKTVSAEVYVFDYSKHPSKPPL---------DGACSPDLRLR 175
+NR R ++ + P I ++ EV+ P P
Sbjct: 146 INRVRVSWLGEEPVAGIWSEKGQVEVFALRRLLQVVDDPQALATFLRDEQARVKPIFTFA 205
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVA 234
GH EG+ L WS G LL+G I LW S Q F H VED+
Sbjct: 206 GHMGEGFALDWSPRVSGRLLTGDCQKNIHLW---TPTDGGSWHVDQRPFMGHTRSVEDLQ 262
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
W + +F S D + IWD+R PS + + + AH +VN + ++ E L +G
Sbjct: 263 WSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSR-REPFLLSGG 321
Query: 294 TDKTVKLFDLR--KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
D +K++DLR K + + TF H + V W+P++ + A+ ++ WDL+ ++
Sbjct: 322 DDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQWDLA-VE 380
Query: 352 EEQTPEDAE------DGPPELLFIHGGHTSKISDFSWNP-CEDWVISS 392
+ D E D P +LLF+H G T + + W+P C ++S+
Sbjct: 381 RDPEAGDTETDPGLADLPQQLLFVHQGETD-LKELHWHPQCPGVLVST 427
>UNIPROTKB|E9PND5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 EMBL:AC114489 HGNC:HGNC:9887 ChiTaRS:RBBP4
IPI:IPI00979287 ProteinModelPortal:E9PND5 SMR:E9PND5
Ensembl:ENST00000490500 ArrayExpress:E9PND5 Bgee:E9PND5
Uniprot:E9PND5
Length = 68
Score = 235 (87.8 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 40/68 (58%), Positives = 55/68 (80%)
Query: 36 ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95
+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ D
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFD 59
Query: 96 ARHYDDDR 103
A HYD ++
Sbjct: 60 ASHYDSEK 67
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 237 (88.5 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 60/211 (28%), Positives = 105/211 (49%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
G EGYGL+WS K G L +G +I LW + + ++ A + H+ VED+AW
Sbjct: 226 GSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQ-WAVGANPLTG-HKKSVEDLAW 283
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-AHQSEVNCLAFNPFNEWILATGST 294
L S D + +WD R+ V +V AH+S+VN +++N +E ++ +G
Sbjct: 284 SPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNR-HENLIVSGGD 342
Query: 295 DKTVKLFDLRKISTA--LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352
D +K++ L+ I + F H + V W+P T + + +WD++ +
Sbjct: 343 DGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEAD 402
Query: 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383
QT + E PP+L+F+H G +++ + W+
Sbjct: 403 GQT--NIEGVPPQLMFVHMGQ-NEVKEVHWH 430
Score = 188 (71.2 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 47/131 (35%), Positives = 68/131 (51%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH L+WS + G L S S D I LWD +APK+ + +Q K HE V +
Sbjct: 271 LTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQ--KAHESDVNVI 328
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW-ILATG 292
+W+ RHE L S GDD L IW L+T +PV H S + + ++P +A+G
Sbjct: 329 SWN-RHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASG 387
Query: 293 STDKTVKLFDL 303
D+T ++D+
Sbjct: 388 EDDQTT-IWDI 397
Score = 133 (51.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 269 VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR---KISTALHTFDSHKEEVFQVGW 325
+ H+ V LA++P +LA+ S D ++KL+D R K + +H+ +V + W
Sbjct: 271 LTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISW 330
Query: 326 NPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPC 385
N ++E ++ S L +W L I + G P LF + H S I+ W+P
Sbjct: 331 N-RHENLIVSGGDDGELKIWSLKTI---------QFGQPVALFKY--HNSPITSVDWHPH 378
Query: 386 EDWVISSVAEDNILQIWQMA 405
E + ED+ IW +A
Sbjct: 379 ETTTFMASGEDDQTTIWDIA 398
Score = 41 (19.5 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPD-----REEPPGKDYSVQKMILGTHTSENEPNYLMLA 83
P Y L + +WP L+ + + D R + P + Y V GT + N +++
Sbjct: 61 PSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVS----GTQADKPRDNEIIVM 116
Query: 84 QVQ-LPLDDSENDARHYDDDRSD 105
++ L E + + D D S+
Sbjct: 117 GLKNLTTMRKEKENKGDDSDTSE 139
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 226 (84.6 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 58/174 (33%), Positives = 87/174 (50%)
Query: 177 HSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + WS+ + E ++SGS D LWD KSL FK HEGV+ W
Sbjct: 108 HTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWD---PAVGKSLRT---FKGHEGVIYSTIW 161
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
F S DQ L IWD++ P V + AHQ+E+ + ++E +L TG+ D
Sbjct: 162 SPHIPGCFASASGDQTLRIWDVKAPGVRLVIP---AHQAEILSCDWCKYDENLLVTGAVD 218
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
++K +DLR + + H V +V ++P + T+LASC + WD S+
Sbjct: 219 CSLKGWDLRNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFSK 272
Score = 176 (67.0 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 45/170 (26%), Positives = 81/170 (47%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHE 240
+ ++WS+ E L++ S D + +WDI A PK +Q++K H V W R E
Sbjct: 69 FDVTWSENNEHVLITSSGDGSLQIWDI-AKPKGP----LQVYKEHTQEAYSVDWSQTRGE 123
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L S DQ +WD P+V K +++ H+ + ++P A+ S D+T+++
Sbjct: 124 QLVVSGSWDQTAKLWD---PAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRI 180
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
+D++ L +H+ E+ W +E +L + + L WDL +
Sbjct: 181 WDVKAPGVRL-VIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLRNV 229
Score = 154 (59.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 55/207 (26%), Positives = 84/207 (40%)
Query: 113 NGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL 172
+G +QI G + + Q + + E V S + D A L
Sbjct: 87 DGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPAVGKSL 146
Query: 173 R-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
R +GH Y WS G S S D + +WD+ A P + + H+ +
Sbjct: 147 RTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKA-PGVRL-----VIPAHQAEIL 200
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
W E L + D L WDLR +V +PV ++ H V + F+PF+ +LA+
Sbjct: 201 SCDWCKYDENLLVTGAVDCSLKGWDLR--NVRQPVFILLGHTYAVRRVKFSPFHATLLAS 258
Query: 292 GSTDKTVKLFDLRKISTALHTFDSHKE 318
S D TV+ +D K + L T + H E
Sbjct: 259 CSYDFTVRFWDFSKPNPLLETVEHHTE 285
>UNIPROTKB|C9J7L0 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0000122
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00947544 ProteinModelPortal:C9J7L0 SMR:C9J7L0
STRING:C9J7L0 Ensembl:ENST00000468092 ArrayExpress:C9J7L0
Bgee:C9J7L0 Uniprot:C9J7L0
Length = 68
Score = 215 (80.7 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 37/68 (54%), Positives = 55/68 (80%)
Query: 36 ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95
+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ D
Sbjct: 1 MTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFD 59
Query: 96 ARHYDDDR 103
A H D D+
Sbjct: 60 ASHCDSDK 67
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 216 (81.1 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 65/236 (27%), Positives = 108/236 (45%)
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGH-LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG 228
P + L+ H E Y L W + H LLSGS D + LWD N + S+ F H
Sbjct: 115 PLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCN---RQNSITT---FVGHND 168
Query: 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWI 288
++ + LF SV D +L +W+ KP+ S+ AH SE C ++ F+ +
Sbjct: 169 LIYGAKFSPLIANLFASVSTDGHLNLWN-SLDFAGKPLMSIEAHASEALCCDWSHFDRNV 227
Query: 289 LATGSTDKTVKLFDLRKISTALHTFDSHKEE--VFQVGWNPKNETILASCCLGRRLMVWD 346
L TG +D ++ +DLRK+ T H F+ + E V ++ +P + +LAS +W+
Sbjct: 228 LVTGGSDGLIRGWDLRKMRT--HVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWN 285
Query: 347 LSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
L R E A++ ++ HT + WNP ++ D++ ++
Sbjct: 286 LER------GESAQE-------VNARHTEFVCGLDWNPHRTHQLADCGWDSLANVY 328
Score = 37 (18.1 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 76 EPNYLMLAQVQL 87
E NYL+LA QL
Sbjct: 22 EANYLLLATSQL 33
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 209 (78.6 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 57/185 (30%), Positives = 92/185 (49%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK 224
GA P + H+ E Y + WS+ + E ++SGS D + LWD +SL FK
Sbjct: 99 GAAGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---RSLCT---FK 152
Query: 225 VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
HE ++ W F S DQ L IWD++T V + V V AHQ+E+ + +
Sbjct: 153 GHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGV-RIV--VPAHQAEILSCDWCKY 209
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
NE +L TG+ D +++ +DLR + + H + +V ++P ++LASC +
Sbjct: 210 NENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFYASVLASCSYDFTVRF 269
Query: 345 WDLSR 349
W+ S+
Sbjct: 270 WNFSK 274
Score = 176 (67.0 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 56/226 (24%), Positives = 102/226 (45%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHE 240
+ ++WS+ E L++ S D + LWD A +Q++K H V V W R E
Sbjct: 71 FDVTWSENNEHVLVTCSGDGSLQLWDTAGAAG-----PLQVYKEHTQEVYSVDWSQTRGE 125
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L S DQ + +WD P+V + + + H+S + ++P A+ S D+T+++
Sbjct: 126 QLVVSGSWDQTVKLWD---PTVGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRI 182
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
+D++ + +H+ E+ W NE +L + + L WDL + +
Sbjct: 183 WDVKTTGVRI-VVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF----- 236
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
ELL GHT I ++P V++S + D ++ W ++
Sbjct: 237 ----ELL----GHTYAIRRVKFSPFYASVLASCSYDFTVRFWNFSK 274
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/144 (27%), Positives = 65/144 (45%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
+GH + Y WS G S S D + +WD+ K+ + H+ +
Sbjct: 152 KGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV------KTTGVRIVVPAHQAEILSCD 205
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
W +E L + D L WDLR +V +PV ++ H + + F+PF +LA+ S
Sbjct: 206 WCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFYASVLASCSY 263
Query: 295 DKTVKLFDLRKISTALHTFDSHKE 318
D TV+ ++ K + L T + H E
Sbjct: 264 DFTVRFWNFSKPNPLLETVEHHTE 287
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 208 (78.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 63/219 (28%), Positives = 106/219 (48%)
Query: 167 ACSPDLRLRGHSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
A P + H+ E Y + WS+ + E ++SGS D + LWD KSL F+
Sbjct: 100 AAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---KSLCT---FRG 153
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
HE ++ W F S DQ L IWD++ V + V + AHQ+E+ + +N
Sbjct: 154 HESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGV-RIV--IPAHQAEILSCDWCKYN 210
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
E +L TG+ D +++ +DLR + + H + +V ++P + ++LASC + W
Sbjct: 211 ENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 270
Query: 346 DLSRIDEE-QTPEDAEDGPPELLFIHGGHTSKISDFSWN 383
+ S+ D +T E + L F T +++D SW+
Sbjct: 271 NFSKPDSLLETVEHHTEFTCGLDFSLQSPT-QVADCSWD 308
Score = 172 (65.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 45/170 (26%), Positives = 81/170 (47%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHE 240
+ ++WS+ E L++ S D + LWD K+ +Q++K H V V W R E
Sbjct: 71 FDVTWSENNEHVLITCSGDGSLQLWDTA-----KAAGPLQVYKEHAQEVYSVDWSQTRGE 125
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L S DQ + +WD P+V K + + H+S + ++P A+ S D+T+++
Sbjct: 126 QLVVSGSWDQTVKLWD---PTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRI 182
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
+D++ + +H+ E+ W NE +L + + L WDL +
Sbjct: 183 WDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNV 231
Score = 169 (64.5 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 47/172 (27%), Positives = 80/172 (46%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
RGH + Y WS G S S D + +WD+ AA + A H+ +
Sbjct: 152 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPA------HQAEILSCD 205
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
W +E L + D L WDLR +V +PV ++ H + + F+PF+ +LA+ S
Sbjct: 206 WCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCSY 263
Query: 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
D TV+ ++ K + L T + H E + ++ ++ T +A C + ++D
Sbjct: 264 DFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 42/192 (21%), Positives = 80/192 (41%)
Query: 215 KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274
K+ +Q++K H V V W G + L P+V K + + H+S
Sbjct: 99 KAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTV--KLWDPTVGKSLCTFRGHES 156
Query: 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILA 334
+ ++P A+ S D+T++++D++ + +H+ E+ W NE +L
Sbjct: 157 IIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLV 215
Query: 335 SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394
+ + L WDL + + ELL GHT I ++P V++S +
Sbjct: 216 TGAVDCSLRGWDLRNVRQPVF---------ELL----GHTYAIRRVKFSPFHASVLASCS 262
Query: 395 EDNILQIWQMAE 406
D ++ W ++
Sbjct: 263 YDFTVRFWNFSK 274
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 207 (77.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 61/235 (25%), Positives = 107/235 (45%)
Query: 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG 228
+P + H+ E + ++ + L+ S D + LW ++ P + ++ FK H
Sbjct: 97 NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDR-PAS-----VRTFKEHAY 150
Query: 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWI 288
V W+ +H +F S D L IWD+R P + + AH E+ +N +++ I
Sbjct: 151 CVYQAVWNPKHGDVFASASGDCTLRIWDVREPGST---MIIPAHDFEILSCDWNKYDDCI 207
Query: 289 LATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
LAT S DKTVK++D+R L + H V +V ++P +++ASC + +WD
Sbjct: 208 LATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYM 267
Query: 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
EDA G + H HT + + +++S D ++ +WQ
Sbjct: 268 -------VEDALVGR----YDH--HTEFAVGIDMSVLVEGLMASTGWDELVYVWQ 309
Score = 187 (70.9 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 49/176 (27%), Positives = 80/176 (45%)
Query: 230 VEDVAWHLRHE-YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWI 288
V DV W H+ L ++GD + I+D P S P++S H EV + +NP
Sbjct: 63 VYDVCWSESHDSVLIAAIGDGS-VKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDS 121
Query: 289 LATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
T S D TVKL+ + + ++ TF H V+Q WNPK+ + AS L +WD+
Sbjct: 122 FLTSSWDDTVKLWAMDR-PASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVR 180
Query: 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
P + I H +I WN +D ++++ + D +++W +
Sbjct: 181 E-------------PGSTMIIPA-HDFEILSCDWNKYDDCILATSSVDKTVKVWDV 222
Score = 140 (54.3 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 39/167 (23%), Positives = 80/167 (47%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH-LRHE 240
Y + WS+ + L++ D + ++D P + + + F+ H V+ V ++ R +
Sbjct: 64 YDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRS---FQEHAREVQSVDYNPTRRD 120
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
S DD L W + P+ V++ H V +NP + + A+ S D T+++
Sbjct: 121 SFLTSSWDDTVKL-WAMDRPA---SVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRI 176
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+D+R+ + + +H E+ WN ++ ILA+ + + + VWD+
Sbjct: 177 WDVREPGSTM-IIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDV 222
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 215 (80.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L H + L W+K K +LL+GS D +WD+ A E Q F+ H G DV
Sbjct: 361 LSKHKGPIFSLKWNK-KGDYLLTGSVDRTAVVWDVKAE------EWKQQFEFHSGPTLDV 413
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
W R+ F + D + + + ++P ++ HQ EVNC+ ++P +LA+ S
Sbjct: 414 DW--RNNVSFATSSTDSMIYLCKI---GETRPAKTFTGHQGEVNCVKWDPTGS-LLASCS 467
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D T K++++++ ST +H H +E++ + W+P + ++L + S D
Sbjct: 468 DDSTAKIWNIKQ-STFVHDLREHTKEIYTIRWSPTGP---GTNNPNKQLTLASAS-FDST 522
Query: 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
DAE G ++L GH + +++P +++ S + D + IW + E
Sbjct: 523 VKLWDAELG--KMLCSFNGHREPVYSLAFSPNGEYIASG-SLDKSIHIWSIKE 572
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 75/299 (25%), Positives = 126/299 (42%)
Query: 113 NGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL 172
N V+I++ H EV + P + L+A+ + A ++ + K G L
Sbjct: 255 NSDVRILE--GHTSEVCACAWSP-SASLLASGSGDATARIWSIPEGSFKAVHTGRNINAL 311
Query: 173 RLR---GHSTEGYG----LSWSKFKEGHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFK 224
L+ G S E L W+ EG LL+ GS D Q +W +N E +
Sbjct: 312 ILKHAKGKSNEKSKDVTTLDWNG--EGTLLATGSCDGQARIWTLNG-------ELISTLS 362
Query: 225 VHEGVVEDVAWHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283
H+G + + W+ + +YL GSV D+ ++WD++ Q H L +
Sbjct: 363 KHKGPIFSLKWNKKGDYLLTGSV--DRTAVVWDVKAEEWK---QQFEFHSGPT--LDVDW 415
Query: 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM 343
N AT STD + L + + A TF H+ EV V W+P ++LASC
Sbjct: 416 RNNVSFATSSTDSMIYLCKIGETRPA-KTFTGHQGEVNCVKWDPTG-SLLASCSDDSTAK 473
Query: 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+W+ I + D + E+ I T ++ NP + ++S + D+ +++W
Sbjct: 474 IWN---IKQSTFVHDLREHTKEIYTIRWSPTGPGTN---NPNKQLTLASASFDSTVKLW 526
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 45/184 (24%), Positives = 79/184 (42%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLE--AMQI 222
G P GH E + W G LL+ SDD+ +W+I + L +I
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDP--TGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEI 493
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD + K + S H+ V LAF+
Sbjct: 494 YTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAE---LGKMLCSFNGHREPVYSLAFS 550
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P E+I A+GS DK++ ++ +++ + T+ + +F+V WN + I A+C +
Sbjct: 551 PNGEYI-ASGSLDKSIHIWSIKE-GKIVKTYTGNGG-IFEVCWNKEGNKI-AACFADNSV 606
Query: 343 MVWD 346
V D
Sbjct: 607 CVLD 610
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 206 (77.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 57/186 (30%), Positives = 93/186 (50%)
Query: 167 ACSPDLRLRGHSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
A P + H+ E Y + WS+ + E ++SGS D + LWD KSL F+
Sbjct: 100 ATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---KSLCT---FRG 153
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
HE V+ W F S DQ L IWD++T V + V V AHQ+E+ + +N
Sbjct: 154 HESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGV-RIV--VPAHQAEILSCDWCKYN 210
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
E ++ TG+ D +++ +DLR + + H + +V ++P + ++LASC + W
Sbjct: 211 ENLVVTGAVDCSLRGWDLRNVQQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 270
Query: 346 DLSRID 351
+ S+ D
Sbjct: 271 NFSKPD 276
Score = 184 (69.8 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 59/226 (26%), Positives = 103/226 (45%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHE 240
+ ++WS+ E L++ S D + LWD A +Q+FK H V V W R E
Sbjct: 71 FDVTWSENNEHVLVTCSGDGSLQLWDTARATG-----PLQVFKEHTQEVYSVDWSQTRGE 125
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L S DQ + +WD P+V K + + H+S + ++P A+ S D+T+++
Sbjct: 126 QLVVSGSWDQTVKLWD---PTVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRI 182
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
+D++ + +H+ E+ W NE ++ + + L WDL + Q P
Sbjct: 183 WDVKTTGVRI-VVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLRNV---QQPVF-- 236
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
ELL GHT I ++P V++S + D ++ W ++
Sbjct: 237 ----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 274
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 45/172 (26%), Positives = 77/172 (44%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
RGH + Y WS G S S D + +WD+ K+ + H+ +
Sbjct: 152 RGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDV------KTTGVRIVVPAHQAEILSCD 205
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
W +E L + D L WDLR +V +PV ++ H + + F+PF+ +LA+ S
Sbjct: 206 WCKYNENLVVTGAVDCSLRGWDLR--NVQQPVFELLGHTYAIRRVKFSPFHASVLASCSY 263
Query: 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
D TV+ ++ K L T + H E + + ++ T +A C + ++D
Sbjct: 264 DFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKIYD 315
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 205 (77.2 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 51/176 (28%), Positives = 89/176 (50%)
Query: 177 HSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + WS+ ++ L+ SGS D + +WD ++ F+ HE V+ W
Sbjct: 105 HTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDPTVG------NSLCTFRGHESVIYSTIW 158
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
F S DQ L IWD++T V + V + AHQ+E+ + +NE +L TG+ D
Sbjct: 159 SPHIPGCFASASGDQTLRIWDVKTTGV-RIV--IPAHQAEILSCDWCKYNENLLVTGAVD 215
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
+++ +DLR + + H + +V ++P + ++LASC + W+ S+ D
Sbjct: 216 CSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPD 271
Score = 169 (64.5 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 44/170 (25%), Positives = 80/170 (47%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHE 240
+ ++WS+ E L++ S D + LWD K+ +Q++K H V V W R E
Sbjct: 66 FDVTWSENNEHVLVTCSGDGSLQLWDTA-----KATGPLQVYKEHTQEVYSVDWSQTRDE 120
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L S DQ + +WD P+V + + H+S + ++P A+ S D+T+++
Sbjct: 121 QLVVSGSWDQTVKVWD---PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRI 177
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
+D++ + +H+ E+ W NE +L + + L WDL +
Sbjct: 178 WDVKTTGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNV 226
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/172 (25%), Positives = 77/172 (44%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
RGH + Y WS G S S D + +WD+ K+ + H+ +
Sbjct: 147 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV------KTTGVRIVIPAHQAEILSCD 200
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
W +E L + D L WDLR +V +PV ++ H + + F+PF+ +LA+ S
Sbjct: 201 WCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCSY 258
Query: 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
D TV+ ++ K L T + H E + + ++ T +A C + +++
Sbjct: 259 DFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETVKIYN 310
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 43/198 (21%), Positives = 83/198 (41%)
Query: 215 KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI--WDLRT----PSVSKPVQS 268
K+ +Q++K H V V W D+Q ++ WD P+V + +
Sbjct: 94 KATGPLQVYKEHTQEVYSVDW--------SQTRDEQLVVSGSWDQTVKVWDPTVGNSLCT 145
Query: 269 VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPK 328
H+S + ++P A+ S D+T++++D++ + +H+ E+ W
Sbjct: 146 FRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRI-VIPAHQAEILSCDWCKY 204
Query: 329 NETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDW 388
NE +L + + L WDL + + ELL GHT I ++P
Sbjct: 205 NENLLVTGAVDCSLRGWDLRNVRQPVF---------ELL----GHTYAIRRVKFSPFHAS 251
Query: 389 VISSVAEDNILQIWQMAE 406
V++S + D ++ W ++
Sbjct: 252 VLASCSYDFTVRFWNFSK 269
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 205 (77.2 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 177 HSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + WS+ + E ++SGS D + LWD KSL F+ HE V+ W
Sbjct: 110 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---KSLCT---FRGHESVIYSTIW 163
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
F S DQ L IWD+++ V + V V AHQ+E+ + +NE +L TG+ D
Sbjct: 164 SPHIPGCFASASGDQTLRIWDVKSTGV-RIV--VPAHQAEILSCDWCKYNENLLVTGAVD 220
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
+++ +DLR + + H + +V ++P + ++LASC + W+ S+ D
Sbjct: 221 CSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPD 276
Score = 172 (65.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 45/170 (26%), Positives = 81/170 (47%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHE 240
+ ++WS+ E L++ S D + LWD K+ +Q++K H V V W R E
Sbjct: 71 FDVTWSENNEHILVTCSGDGSLQLWDTA-----KATGPLQVYKEHTQEVYSVDWSQTRGE 125
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L S DQ + +WD P+V K + + H+S + ++P A+ S D+T+++
Sbjct: 126 QLVVSGSWDQTVKLWD---PTVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRI 182
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
+D++ + +H+ E+ W NE +L + + L WDL +
Sbjct: 183 WDVKSTGVRI-VVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNV 231
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
RGH + Y WS G S S D + +WD+ KS + H+ +
Sbjct: 152 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV------KSTGVRIVVPAHQAEILSCD 205
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
W +E L + D L WDLR +V +PV ++ H + + F+PF+ +LA+ S
Sbjct: 206 WCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCSY 263
Query: 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
D TV+ ++ K L T + H E + + ++ T +A C + ++D
Sbjct: 264 DFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKIYD 315
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 42/192 (21%), Positives = 80/192 (41%)
Query: 215 KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274
K+ +Q++K H V V W G + L P+V K + + H+S
Sbjct: 99 KATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTV--KLWDPTVGKSLCTFRGHES 156
Query: 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILA 334
+ ++P A+ S D+T++++D++ + +H+ E+ W NE +L
Sbjct: 157 VIYSTIWSPHIPGCFASASGDQTLRIWDVKSTGVRI-VVPAHQAEILSCDWCKYNENLLV 215
Query: 335 SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394
+ + L WDL + + ELL GHT I ++P V++S +
Sbjct: 216 TGAVDCSLRGWDLRNVRQPVF---------ELL----GHTYAIRRVKFSPFHASVLASCS 262
Query: 395 EDNILQIWQMAE 406
D ++ W ++
Sbjct: 263 YDFTVRFWNFSK 274
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 50/176 (28%), Positives = 89/176 (50%)
Query: 177 HSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + WS+ + E ++SGS D + +WD ++ F+ HE V+ W
Sbjct: 105 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVG------NSLCTFRGHESVIYSTIW 158
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
F S DQ L IWD++T V + V + AHQ+E+ + +NE ++ TG+ D
Sbjct: 159 SPHIPGCFASASGDQTLRIWDVKTAGV-RIV--IPAHQTEILSCDWCKYNENLVVTGAVD 215
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
+++ +DLR + + H + +V ++P + ++LASC + W+ S+ D
Sbjct: 216 CSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPD 271
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 43/170 (25%), Positives = 80/170 (47%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHE 240
+ ++WS+ E L++ S D + LWD K+ +Q++K H V V W R E
Sbjct: 66 FDVTWSEDNEHVLVTCSGDGSLQLWDTA-----KATGPLQVYKEHTQEVYSVDWSQTRGE 120
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L S DQ + +WD P+V + + H+S + ++P A+ S D+T+++
Sbjct: 121 QLVVSGSWDQTVKVWD---PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRI 177
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
+D++ + +H+ E+ W NE ++ + + L WDL +
Sbjct: 178 WDVKTAGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNV 226
Score = 159 (61.0 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 45/172 (26%), Positives = 77/172 (44%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
RGH + Y WS G S S D + +WD+ K+ + H+ +
Sbjct: 147 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV------KTAGVRIVIPAHQTEILSCD 200
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
W +E L + D L WDLR +V +PV ++ H + + F+PF+ +LA+ S
Sbjct: 201 WCKYNENLVVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCSY 258
Query: 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
D TV+ ++ K L T + H E + + ++ T +A C + ++D
Sbjct: 259 DFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETIKIYD 310
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 50/176 (28%), Positives = 89/176 (50%)
Query: 177 HSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + WS+ + E ++SGS D + +WD ++ F+ HE V+ W
Sbjct: 105 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVG------NSLCTFRGHESVIYSTIW 158
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
F S DQ L IWD++T V + V + AHQ+E+ + +NE ++ TG+ D
Sbjct: 159 SPHIPGCFASASGDQTLRIWDVKTTGV-RIV--IPAHQTEILSCDWCKYNENLVVTGAVD 215
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
+++ +DLR + + H + +V ++P + ++LASC + W+ S+ D
Sbjct: 216 CSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPD 271
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 43/170 (25%), Positives = 80/170 (47%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHE 240
+ ++WS+ E L++ S D + LWD K+ +Q++K H V V W R E
Sbjct: 66 FDVTWSENNEHVLVTCSGDGSLQLWDTA-----KATGPLQVYKEHTQEVYSVDWSQTRGE 120
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L S DQ + +WD P+V + + H+S + ++P A+ S D+T+++
Sbjct: 121 QLVVSGSWDQTVKVWD---PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRI 177
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
+D++ + +H+ E+ W NE ++ + + L WDL +
Sbjct: 178 WDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNV 226
Score = 159 (61.0 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 45/172 (26%), Positives = 77/172 (44%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
RGH + Y WS G S S D + +WD+ K+ + H+ +
Sbjct: 147 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV------KTTGVRIVIPAHQTEILSCD 200
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
W +E L + D L WDLR +V +PV ++ H + + F+PF+ +LA+ S
Sbjct: 201 WCKYNENLVVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCSY 258
Query: 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
D TV+ ++ K L T + H E + + ++ T +A C + ++D
Sbjct: 259 DFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 310
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 206 (77.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 72/228 (31%), Positives = 106/228 (46%)
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
+ L GH T G E +++GS + LWD+ AA K L + H+ +
Sbjct: 57 MSLTGH-TSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAA---KILRTLM---GHKASIS 109
Query: 232 DVAWHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILA 290
+ +H EYL GSV D + +WD+R V H V CLAF+P +W LA
Sbjct: 110 SLDFHPMGEYLASGSV--DSNIKLWDVRRKGC---VFRYKGHTQAVRCLAFSPDGKW-LA 163
Query: 291 TGSTDKTVKLFDLRKISTALHT-FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
+ S D TVKL+DL I+ + T F SH V V ++P NE +LAS R + +WDL +
Sbjct: 164 SASDDSTVKLWDL--IAGKMITEFTSHTSAVNVVQFHP-NEYLLASGSADRTVKLWDLEK 220
Query: 350 IDEEQTPEDAEDGPPELLF------IHGGHTSKISDFSWNP--CEDWV 389
+ + E +LF ++ G + + + W P C D V
Sbjct: 221 FNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPDRCFDVV 268
Score = 137 (53.3 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 45/173 (26%), Positives = 85/173 (49%)
Query: 177 HSTEGYGLSWSKFKEGHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
HS+ L K G LL+ G +D ++ +W ++ SL H V + +
Sbjct: 19 HSSNVSSLVLGK-SSGRLLATGGEDCRVNIWAVSKPNCIMSLTG------HTSAVGCIQF 71
Query: 236 HLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
+ E + GS+ L +WDL +K +++++ H++ ++ L F+P E+ LA+GS
Sbjct: 72 NSSEERVVAGSLSGS--LRLWDLEA---AKILRTLMGHKASISSLDFHPMGEY-LASGSV 125
Query: 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
D +KL+D+R+ + + H + V + ++P + LAS + +WDL
Sbjct: 126 DSNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSPDGKW-LASASDDSTVKLWDL 176
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 200 (75.5 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 68/240 (28%), Positives = 110/240 (45%)
Query: 115 KVQIIQQINHDGEVNRARYMPQNPF-----LIATKTVSAEVYVFDYSKHPSKPPLDGACS 169
++++I +I H + A + F L AT VS + VFD+S ++P D C
Sbjct: 355 RLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPA-DMQC- 412
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
P + + S LSW+K ++ H+ S + + +WD+ +SL M+ ++ HE
Sbjct: 413 PIVEMSTRSKLSC-LSWNKHEKNHIASSDYEGIVTVWDVTT---RQSL--ME-YEEHEKR 465
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN--CLAFNPFNEW 287
V + + S DD + +W R + SV+ + N C+ +NP +
Sbjct: 466 AWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEA------SVINIDMKANICCVKYNPGSSN 519
Query: 288 ILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+A GS D + +DLR IS LH F HK+ V V + NE LAS L +WD+
Sbjct: 520 YIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNE--LASASTDSTLRLWDV 577
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 44/157 (28%), Positives = 77/157 (49%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN--AAPKNKSLEA-MQIFKVHEGVVEDV 233
H + + +S+ + L+SGSDD ++ +W A+ N ++A + K + G +
Sbjct: 462 HEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYI 521
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
A GS D ++ +DLR ++S+P+ H+ V+ + F NE LA+ S
Sbjct: 522 A--------VGSA--DHHIHYYDLR--NISQPLHVFSGHKKAVSYVKFLSNNE--LASAS 567
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNE 330
TD T++L+D+ K + + TF H E VG +E
Sbjct: 568 TDSTLRLWDV-KDNLPVRTFRGHTNEKNFVGLTVNSE 603
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 61/229 (26%), Positives = 101/229 (44%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
+ H G+S+S + +SGSDD + +WD + + L H V+ V
Sbjct: 226 QAHKEAIRGISFSP-TDSKFVSGSDDGTLRIWDFMRCQEERVLRG------HGADVKCVH 278
Query: 235 WHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
WH + + GS + Q + IWD P + ++ AH+S V L +N W L T S
Sbjct: 279 WHPQKGMIVSGSKDNQQPIKIWD---PKSGIALATLHAHKSTVMDLKWNDNGNW-LVTAS 334
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +KLFD+R + + F HK+E V W+P +E + S ++ W++
Sbjct: 335 RDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGT---- 390
Query: 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
D E G E H S + +W+P ++ S + D+ ++ W
Sbjct: 391 ----DKEIGCVET-----AHDSIVWTLAWHPLGH-ILCSGSNDHTIKFW 429
Score = 146 (56.5 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 45/184 (24%), Positives = 85/184 (46%)
Query: 168 CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ--ICLWDINAAPKNKSLEAMQIFKV 225
C + LRGH + + W K G ++SGS D Q I +WD PK+ A+
Sbjct: 261 CQEERVLRGHGADVKCVHWHPQK-GMIVSGSKDNQQPIKIWD----PKSGI--ALATLHA 313
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+ V D+ W+ +L + D L ++D+R ++ + VQ H+ E + ++++P +
Sbjct: 314 HKSTVMDLKWNDNGNWLV-TASRDHLLKLFDIR--NLREEVQVFRGHKKEASSVSWHPIH 370
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
E + +G +D ++ +++ +H V+ + W+P IL S + W
Sbjct: 371 EGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGH-ILCSGSNDHTIKFW 429
Query: 346 DLSR 349
+R
Sbjct: 430 TRNR 433
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 196 (74.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 67/228 (29%), Positives = 106/228 (46%)
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
+ L GH+T L S KE +++GS I +WD+ AA ++L H+ +
Sbjct: 57 MSLTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEAAKILRTLLG------HKANIC 109
Query: 232 DVAWHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILA 290
+ +H ++ GS+ D + +WD+R +S H V CL F+P +W LA
Sbjct: 110 SLDFHPYGSFVASGSLDTD--IKLWDVRRKGCIFKYKS---HTQAVRCLRFSPDGKW-LA 163
Query: 291 TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR- 349
+ + D TVKL+DL + F H V V ++P +E +LAS R + WDL +
Sbjct: 164 SAADDHTVKLWDLTA-GKVMFEFTGHSGPVNVVEFHP-SEYLLASGSSDRTIRFWDLEKF 221
Query: 350 -----IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP--CEDWVI 390
I+EE TP P+ ++GG + + W P C D V+
Sbjct: 222 HVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVV 269
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/227 (23%), Positives = 105/227 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
HS+ L K G LL+ G DD ++ +W +N SL H +E +
Sbjct: 19 HSSNVSSLVLGK-STGRLLATGGDDCRVNVWSVNKPNCVMSLTG------HTTPIESLQI 71
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
+ E + + +WDL +K +++++ H++ + L F+P+ ++ A+GS D
Sbjct: 72 SAKEELIVAG-SQSGSIRVWDLEA---AKILRTLLGHKANICSLDFHPYGSFV-ASGSLD 126
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS--RIDEE 353
+KL+D+R+ + + SH + V + ++P + LAS + +WDL+ ++ E
Sbjct: 127 TDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAGKVMFE 184
Query: 354 QT----PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396
T P + + P + G + + F W+ + V+S + E+
Sbjct: 185 FTGHSGPVNVVEFHPSEYLLASGSSDRTIRF-WDLEKFHVVSCIEEE 230
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 189 (71.6 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 56/209 (26%), Positives = 103/209 (49%)
Query: 217 LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW--DLRTPSVSKPVQSVVAHQS 274
LE +Q H G WH + L + G+D+ + IW D V+K V S H
Sbjct: 4 LELLQCLTGHRGRAWGAGWHPKGNVL-ATCGEDKTIRIWAEDASQRWVAKTVLSD-GHSR 61
Query: 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETIL 333
+ +A++P ++ LA+ S D TV ++D + + T + H+ EV V W+ K+ ++L
Sbjct: 62 TIRDVAWSPCGQY-LASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWS-KSGSLL 119
Query: 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSV 393
A+C + + VW++++ DE E + HT + W+P ED +++S
Sbjct: 120 ATCSRDKSVWVWEVAQEDEY-----------ECAAVLNTHTQDVKKVEWHPHED-ILASA 167
Query: 394 AEDNILQIWQ--MAENIYHDEDDLPGDES 420
+ DN +++++ +A++ + D L ES
Sbjct: 168 SYDNTIKLYKEDLADSDWSSFDTLVSHES 196
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 71/298 (23%), Positives = 129/298 (43%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H + + P +L A+ + A V ++D K + C+ L GH E
Sbjct: 59 HSRTIRDVAWSPCGQYL-ASASFDATVAIWD------KKSGEFECNATLE--GHENEVKS 109
Query: 184 LSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYL 242
+SWSK G LL+ S D + +W++ A +++ E + H V+ V WH HE +
Sbjct: 110 VSWSK--SGSLLATCSRDKSVWVWEV--AQEDE-YECAAVLNTHTQDVKKVEWH-PHEDI 163
Query: 243 FGSVGDDQYLLIW--DLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
S D + ++ DL S ++V+H+S V ++F+ LA+ S D+TVK+
Sbjct: 164 LASASYDNTIKLYKEDLADSDWSS-FDTLVSHESTVWSISFDGSGNR-LASCSDDQTVKI 221
Query: 301 FDLRK------ISTALHT---------FDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
+ K +S +T H V+ + W K +LA+ C G
Sbjct: 222 WQEYKPGNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISWC-KQSGLLATAC-GD----- 274
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
D+ RI +E + E++ H+ ++ WNP ++ + ++D +++W+
Sbjct: 275 DMVRIFKEVEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLWK 332
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 194 (73.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 68/229 (29%), Positives = 105/229 (45%)
Query: 171 DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVV 230
DL L GH+T L S KE +++GS I +WD+ AA ++L H+ +
Sbjct: 56 DL-LTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEAAKILRTLLG------HKANI 107
Query: 231 EDVAWHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWIL 289
+ +H ++ GS+ D + +WD+R +S H V CL F+P +W L
Sbjct: 108 CSLDFHPYGSFVASGSLDTD--IKLWDVRRKGCIFKYKS---HTQAVRCLRFSPDGKW-L 161
Query: 290 ATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
A+ + D TVKL+DL + F H V V ++P E +LAS + WDL +
Sbjct: 162 ASAADDHTVKLWDLTA-GKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEK 220
Query: 350 ------IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP--CEDWVI 390
I+EE TP P+ ++GG + + W P C D V+
Sbjct: 221 FHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVV 269
Score = 138 (53.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 51/227 (22%), Positives = 108/227 (47%)
Query: 177 HSTEGYGLSWSKFKEGHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
HS+ L K G LL+ G DD ++ +W + A ++ L H +E +
Sbjct: 19 HSSNVSSLVLGK-STGRLLATGGDDCRVNVWSV-AQLRHDLLTG------HTTPIESLQI 70
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
+ E + + +WDL +K +++++ H++ + L F+P+ ++ A+GS D
Sbjct: 71 SAKEELIVAG-SQSGSIRVWDLEA---AKILRTLLGHKANICSLDFHPYGSFV-ASGSLD 125
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS--RIDEE 353
+KL+D+R+ + + SH + V + ++P + LAS + +WDL+ ++ E
Sbjct: 126 TDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAGKVMFE 183
Query: 354 QT----PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396
T P + + P + ++ +S ++ W+ + V+S + E+
Sbjct: 184 FTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEE 230
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 194 (73.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 66/228 (28%), Positives = 104/228 (45%)
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
+ L GH+T L S KE +++GS I +WD+ AA ++L H+ +
Sbjct: 57 MSLTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEAAKILRTLLG------HKANIC 109
Query: 232 DVAWHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILA 290
+ +H ++ GS+ D + +WD+R +S H V CL F+P +W LA
Sbjct: 110 SLDFHPYGSFVASGSLDTD--IKLWDVRRKGCIFKYKS---HTQAVRCLRFSPDGKW-LA 163
Query: 291 TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR- 349
+ + D TVKL+DL + F H V V ++P E +LAS + WDL +
Sbjct: 164 SAADDHTVKLWDLTA-GKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKF 222
Query: 350 -----IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP--CEDWVI 390
I+EE TP P+ ++GG + + W P C D V+
Sbjct: 223 HVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVV 270
Score = 146 (56.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 52/227 (22%), Positives = 107/227 (47%)
Query: 177 HSTEGYGLSWSKFKEGHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
HS+ L K G LL+ G DD ++ +W +N SL H +E +
Sbjct: 19 HSSNVSSLVLGK-STGRLLATGGDDCRVNVWSVNKPNCVMSLTG------HTTPIESLQI 71
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
+ E + + +WDL +K +++++ H++ + L F+P+ ++ A+GS D
Sbjct: 72 SAKEELIVAG-SQSGSIRVWDLEA---AKILRTLLGHKANICSLDFHPYGSFV-ASGSLD 126
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS--RIDEE 353
+KL+D+R+ + + SH + V + ++P + LAS + +WDL+ ++ E
Sbjct: 127 TDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAGKVMFE 184
Query: 354 QT----PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396
T P + + P + ++ +S ++ W+ + V+S + E+
Sbjct: 185 FTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEE 231
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 191 (72.3 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 53/185 (28%), Positives = 94/185 (50%)
Query: 164 LDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI 222
+D + +L+ L GHS YG S+S + +LLS S+D + LW + ++ +
Sbjct: 288 MDEKTASELKILYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL------QTFTCLVG 340
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+K H V D + + Y F S G D+ +W +P++ H ++VNC F+
Sbjct: 341 YKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLADVNCTRFH 396
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P + ++ ATGS D+TV+L+D+ + F HK + + ++P N LA+ R+
Sbjct: 397 PNSNYV-ATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRV 453
Query: 343 MVWDL 347
++WD+
Sbjct: 454 LLWDI 458
Score = 117 (46.2 bits), Expect = 0.00086, P = 0.00086
Identities = 44/188 (23%), Positives = 85/188 (45%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
+GH+ + +S + + +SG D LW + + ++IF H V
Sbjct: 342 KGHNYPVWDTQFSPYGY-YFVSGGHDRVARLWATD------HYQPLRIFAGHLADVNCTR 394
Query: 235 WHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+H Y+ GS D+ + +WD+ + V+ H+ ++ L F+P N LATG+
Sbjct: 395 FHPNSNYVATGSA--DRTVRLWDVLNGNC---VRIFTGHKGPIHSLTFSP-NGRFLATGA 448
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
TD V L+D+ + H + V + ++ E ILAS + + +WD + E+
Sbjct: 449 TDGRVLLWDIGH-GLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLWDAVKAFED 506
Query: 354 QTPEDAED 361
+++++
Sbjct: 507 LETDNSQE 514
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 190 (71.9 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 52/207 (25%), Positives = 95/207 (45%)
Query: 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255
S SDD + +WD + +SL H V+ V WH L S G D + +W
Sbjct: 66 SCSDDTTVKVWDFARCQEERSLTG------HGWDVKSVDWHPTKSLLV-SGGKDYLVKLW 118
Query: 256 DLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDS 315
D ++ + ++S H++ V C+ +N W+L T S D+ +KL+D+R + L +F
Sbjct: 119 DAKS---GRELRSFHGHKNIVQCVKWNQNGNWVL-TASKDQIIKLYDIRSMKE-LESFRG 173
Query: 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS 375
H ++V + W+P +E S + W + +TP+ + I+ H +
Sbjct: 174 HNKDVTALAWHPFHEEYFVSGSYDGAIFHWLVGH----ETPQ---------IEINNAHDN 220
Query: 376 KISDFSWNPCEDWVISSVAEDNILQIW 402
+ D +W+P +++ S D+ + W
Sbjct: 221 SVWDLAWHPV-GYLLCSGGNDHATRFW 246
Score = 157 (60.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 40/160 (25%), Positives = 76/160 (47%)
Query: 168 CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE 227
C + L GH + + W K L+SG D + LWD KS ++ F H+
Sbjct: 81 CQEERSLTGHGWDVKSVDWHPTKS-LLVSGGKDYLVKLWDA------KSGRELRSFHGHK 133
Query: 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287
+V+ V W+ ++ + DQ + ++D+R+ K ++S H +V LA++PF+E
Sbjct: 134 NIVQCVKWNQNGNWVL-TASKDQIIKLYDIRS---MKELESFRGHNKDVTALAWHPFHEE 189
Query: 288 ILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNP 327
+GS D + + + + + ++H V+ + W+P
Sbjct: 190 YFVSGSYDGAIFHWLVGHETPQIEINNAHDNSVWDLAWHP 229
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 42/163 (25%), Positives = 70/163 (42%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVED 232
L+ H + WS E +++G D I W N + +++ K H V D
Sbjct: 3 LQAHDQAVRSMIWSN-NENWMVTGDDGGAIKYWQSN-------MNNVKVNKTAHRESVRD 54
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
+++ R + F S DD + +WD + +S+ H +V + ++P +L +G
Sbjct: 55 LSF-CRTDLKFCSCSDDTTVKVWDFAR---CQEERSLTGHGWDVKSVDWHPTKS-LLVSG 109
Query: 293 STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILAS 335
D VKL+D K L +F HK V V WN +L +
Sbjct: 110 GKDYLVKLWDA-KSGRELRSFHGHKNIVQCVKWNQNGNWVLTA 151
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 189 (71.6 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 52/174 (29%), Positives = 88/174 (50%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GHS YG+S+S + +LLS S+D I LW + ++ + +K H V D
Sbjct: 495 LHGHSGPVYGVSFSPDRN-YLLSSSEDGTIRLWSL------QTFTCLVGYKGHNYPVWDT 547
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ Y F S G D+ +W +P++ H ++V C F+P + ++ ATGS
Sbjct: 548 QFS-PFGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLADVTCTRFHPNSNYV-ATGS 602
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+D+TV+L+D+ + F HK + + ++P N LAS R+++WD+
Sbjct: 603 SDRTVRLWDVLN-GNCVRIFTGHKGPIHSLAFSP-NGKFLASGSTDGRVLLWDI 654
Score = 47 (21.6 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 32 YDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP-LD 90
Y L+ +E P + + EE K +K +G+ + + +PN ++ LP L
Sbjct: 330 YGLLKEPEIEVPLDDEDEEAENEEGKPKKKKTKKDSMGSKSKKQDPNAPQQNRIPLPELK 389
Query: 91 DSE 93
DS+
Sbjct: 390 DSD 392
Score = 40 (19.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 84 QVQLPLDDSENDARH 98
++++PLDD + +A +
Sbjct: 337 EIEVPLDDEDEEAEN 351
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 58/184 (31%), Positives = 92/184 (50%)
Query: 165 DGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK 224
D + S LRGHS Y ++ G LLS S+D+ + WD+ KS +++
Sbjct: 341 DASGSEIKTLRGHSGPVYRTAFLTDASG-LLSCSEDSTVRYWDL------KSFTNTVLYR 393
Query: 225 VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
H V DV Y F + D+ +W + P++ H S+V+C+ F+P
Sbjct: 394 GHAYPVWDVDVSPCSLY-FSTASHDRTARLWSFAR---TYPLRLYAGHLSDVDCVKFHPN 449
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
+ +I ATGSTDKTV+L+ R+ ++ F H+ V + ++P N LAS +RL +
Sbjct: 450 SNYI-ATGSTDKTVRLWSTRQ-GASVRLFTGHRGPVLTLAFSP-NGKYLASAGEDQRLKL 506
Query: 345 WDLS 348
WDL+
Sbjct: 507 WDLA 510
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 42/161 (26%), Positives = 77/161 (47%)
Query: 172 LRL-RGHSTEGYGLSWSKF--KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG 228
LRL GH ++ + KF ++ +GS D + LW ++++F H G
Sbjct: 431 LRLYAGHLSD---VDCVKFHPNSNYIATGSTDKTVRLWSTRQGA------SVRLFTGHRG 481
Query: 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWI 288
V +A+ +YL S G+DQ L +WDL + + K ++ H ++ L+F+ + +
Sbjct: 482 PVLTLAFSPNGKYL-ASAGEDQRLKLWDLASGGLFKDLRG---HTDTISSLSFSQDSS-L 536
Query: 289 LATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKN 329
+A+ S D TV+++D+R + T E + Q + N
Sbjct: 537 VASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSN 577
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
N +ATGSTDKTV+L+ R+ ++ F H+ V + ++P N LAS +RL +
Sbjct: 449 NSNYIATGSTDKTVRLWSTRQ-GASVRLFTGHRGPVLTLAFSP-NGKYLASAGEDQRLKL 506
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIH-GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
WDL A G LF GHT IS S++ + +++S + DN +++W
Sbjct: 507 WDL-----------ASGG----LFKDLRGHTDTISSLSFSQ-DSSLVASASMDNTVRVWD 550
Query: 404 M 404
+
Sbjct: 551 I 551
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 182 (69.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 52/190 (27%), Positives = 97/190 (51%)
Query: 217 LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA--HQS 274
LE +Q H G V AWH + LF S G+D+ + +W+ ++ + Q+V+ H
Sbjct: 4 LELLQTLTGHAGRVWSAAWHPGGK-LFASCGEDKTIRVWN-KSDTDRWVAQTVLTDGHTR 61
Query: 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETIL 333
+ LA++ + LA+ S D TV ++D + + T + H EV V W+ ++ +L
Sbjct: 62 TIRELAWSCCGHY-LASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWS-RSGNLL 119
Query: 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSV 393
A+C + + +W++ P D ED E + + GHT + W+P ED +++S
Sbjct: 120 ATCSRDKSVWIWEI-----HHAP-DQED-EYECVAVLNGHTQDVKKVCWHPQED-LLASA 171
Query: 394 AEDNILQIWQ 403
+ DN +++++
Sbjct: 172 SYDNTIRMYR 181
Score = 163 (62.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 62/252 (24%), Positives = 113/252 (44%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKS-LEAMQIFKVHEGVVE 231
L GH E ++WS+ G+LL+ S D + +W+I+ AP + E + + H V+
Sbjct: 100 LEGHDNEVKSVTWSR--SGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVK 157
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIW--DLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWIL 289
V WH + + L S D + ++ DL S + ++ + +H S V ++F+ + L
Sbjct: 158 KVCWHPQED-LLASASYDNTIRMYRQDL-ADSEWEMLEPLESHSSTVWSISFDATGQR-L 214
Query: 290 ATGSTDKTVKLF--------------DLRKISTALHTFDS-HKEEVFQVGWNPKNETILA 334
A+ S D TVK++ D I + T H V+ + W K +LA
Sbjct: 215 ASCSEDTTVKVWQQYGPDNALGIPCPDRGTIWKCVCTLSGYHSRSVYDIDWC-KQTGLLA 273
Query: 335 SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 394
+ C G D RI E + D + EL+ H+ + +W+P ++ + +
Sbjct: 274 TAC-GD-----DTVRIFREASDSDRNEPTFELVVTVEAHSQDANKVAWHPTVPGLLLTAS 327
Query: 395 EDNILQIWQMAE 406
+D +++WQ +
Sbjct: 328 DDGEIKLWQYVD 339
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 191 (72.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 53/185 (28%), Positives = 94/185 (50%)
Query: 164 LDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI 222
+D + +L+ L GHS YG S+S + +LLS S+D + LW + ++ +
Sbjct: 526 MDEKTASELKILYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL------QTFTCLVG 578
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+K H V D + + Y F S G D+ +W +P++ H ++VNC F+
Sbjct: 579 YKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLADVNCTRFH 634
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P + ++ ATGS D+TV+L+D+ + F HK + + ++P N LA+ R+
Sbjct: 635 PNSNYV-ATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRV 691
Query: 343 MVWDL 347
++WD+
Sbjct: 692 LLWDI 696
Score = 42 (19.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 52 DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP-LDDSE 93
+ EE K +K +G+ + + +PN ++ LP L DS+
Sbjct: 392 ENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSD 434
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 191 (72.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 53/185 (28%), Positives = 94/185 (50%)
Query: 164 LDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI 222
+D + +L+ L GHS YG S+S + +LLS S+D + LW + ++ +
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL------QTFTCLVG 580
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+K H V D + + Y F S G D+ +W +P++ H ++VNC F+
Sbjct: 581 YKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLADVNCTRFH 636
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P + ++ ATGS D+TV+L+D+ + F HK + + ++P N LA+ R+
Sbjct: 637 PNSNYV-ATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRV 693
Query: 343 MVWDL 347
++WD+
Sbjct: 694 LLWDI 698
Score = 42 (19.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 52 DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP-LDDSE 93
+ EE K +K +G+ + + +PN ++ LP L DS+
Sbjct: 394 ENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSD 436
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 191 (72.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 53/185 (28%), Positives = 94/185 (50%)
Query: 164 LDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI 222
+D + +L+ L GHS YG S+S + +LLS S+D + LW + ++ +
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL------QTFTCLVG 580
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+K H V D + + Y F S G D+ +W +P++ H ++VNC F+
Sbjct: 581 YKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLADVNCTRFH 636
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P + ++ ATGS D+TV+L+D+ + F HK + + ++P N LA+ R+
Sbjct: 637 PNSNYV-ATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRV 693
Query: 343 MVWDL 347
++WD+
Sbjct: 694 LLWDI 698
Score = 42 (19.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 52 DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP-LDDSE 93
+ EE K +K +G+ + + +PN ++ LP L DS+
Sbjct: 394 ENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSD 436
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 191 (72.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 53/185 (28%), Positives = 94/185 (50%)
Query: 164 LDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI 222
+D + +L+ L GHS YG S+S + +LLS S+D + LW + ++ +
Sbjct: 529 MDEKTASELKILYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL------QTFTCLVG 581
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+K H V D + + Y F S G D+ +W +P++ H ++VNC F+
Sbjct: 582 YKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLADVNCTRFH 637
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P + ++ ATGS D+TV+L+D+ + F HK + + ++P N LA+ R+
Sbjct: 638 PNSNYV-ATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRV 694
Query: 343 MVWDL 347
++WD+
Sbjct: 695 LLWDI 699
Score = 42 (19.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 52 DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP-LDDSE 93
+ EE K +K +G+ + + +PN ++ LP L DS+
Sbjct: 395 ENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSD 437
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 54/176 (30%), Positives = 92/176 (52%)
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
+RL HS YG ++S + +LLS S+DA LW ++ K+ A+ +K H G V
Sbjct: 373 VRLLSHSGPVYGTTFSPDNK-YLLSCSEDASARLWSVDT----KT--ALVAYKGHTGPVW 425
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
DVA+ Y F + DQ +W P++ H S+V+C+ F+P + ++L T
Sbjct: 426 DVAFGPFGHY-FATASHDQTAQLWSC---DHIYPLRVFAGHLSDVDCVTFHPNSAYVL-T 480
Query: 292 GSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
GS+DKT +L+D+ + ++ F+ H + V V P T+ ++ G + +WD+
Sbjct: 481 GSSDKTCRLWDVHR-GHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGL-IHLWDI 534
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 187 (70.9 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 66/228 (28%), Positives = 105/228 (46%)
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
+ L GH+T L S KE +++GS I +WD+ AA ++L H+ +
Sbjct: 57 MSLTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEAAKILRTLLG------HKANIC 109
Query: 232 DVAWHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILA 290
+ +H ++ GS+ D + +WD+R +S H V CL F+P +W LA
Sbjct: 110 SLDFHPYGSFVASGSLDTD--IKLWDVRRKGCIFKYKS---HTQAVRCLRFSPDGKW-LA 163
Query: 291 TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR- 349
+ + D TVKL+DL + F H V V ++P +E LA + R + WDL +
Sbjct: 164 SAADDHTVKLWDLTA-GKVMFEFTGHYGPVNVVEFHP-SEYPLAGSPVHRTIRFWDLEKF 221
Query: 350 -----IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP--CEDWVI 390
I+EE TP P+ ++GG + + W P C D V+
Sbjct: 222 HVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVV 269
Score = 140 (54.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 43/173 (24%), Positives = 83/173 (47%)
Query: 177 HSTEGYGLSWSKFKEGHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
HS+ L K G LL+ G DD ++ +W +N SL H +E +
Sbjct: 19 HSSNVSSLVLGK-STGRLLATGGDDCRVNVWSVNKPNCVMSLTG------HTTPIESLQI 71
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
+ E + + +WDL +K +++++ H++ + L F+P+ ++ A+GS D
Sbjct: 72 SAKEELIVAG-SQSGSIRVWDLEA---AKILRTLLGHKANICSLDFHPYGSFV-ASGSLD 126
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
+KL+D+R+ + + SH + V + ++P + LAS + +WDL+
Sbjct: 127 TDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 179 (68.1 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/210 (27%), Positives = 100/210 (47%)
Query: 215 KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274
K +++MQ ++ V ++AWH E L + +D+Y+ IW T VQS+ H+
Sbjct: 13 KLIDSMQKEAPYDKVW-NLAWHPNGEIL-ATCANDKYIQIWSKDTNGKWGLVQSLEGHEK 70
Query: 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS---TALHTFDSHKEEVFQVGWNPKNET 331
V +A++P + LA S D + +++ K T + + + H EV V W+ T
Sbjct: 71 TVRRVAWSPCGRF-LAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTG-T 128
Query: 332 ILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIS 391
+LA+C + + +W + ED D E L I+ GH I W+P E+ + S
Sbjct: 129 LLATCSRDKSIWIWQM---------EDDNDF--ECLSINSGHGQDIKCVLWHPNEELLAS 177
Query: 392 SVAEDNILQIWQMAENIYHDEDDLPGDESA 421
S +D I + W+ + + + L G ES+
Sbjct: 178 SSYDDTI-KFWKDIDGDWECINTLTGHESS 206
Score = 159 (61.0 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 58/239 (24%), Positives = 102/239 (42%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GH+ E ++W G LL+ S D I +W + + E + I H ++
Sbjct: 111 LEGHTYEVKSVAWDS--TGTLLATCSRDKSIWIWQME---DDNDFECLSINSGHGQDIKC 165
Query: 233 VAWHLRHEYLFGSVGDDQYLLIW-DLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
V WH E L S DD + W D+ + + ++ H+S + LAFN + +++
Sbjct: 166 VLWHPNEELLASSSYDDT-IKFWKDI--DGDWECINTLTGHESSIWDLAFNKDGDKLVSC 222
Query: 292 GSTDKTVKLFDLRKISTA-LHTFDSHKEE---VFQVGWNPKNETILASCCLGRRLMVWDL 347
G DK V + K + ++ F E ++ + W+ TI+ D
Sbjct: 223 GE-DKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSA--------DD 273
Query: 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
S I EQ +D D +L H S ++ WNP +++S +D ++IW++ +
Sbjct: 274 SIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWELQD 332
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 188 (71.2 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 52/185 (28%), Positives = 94/185 (50%)
Query: 164 LDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI 222
+D + +L+ L GHS YG S+S + +LLS S+D + LW + ++ +
Sbjct: 529 MDEKTASELKILYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL------QTFTCLVG 581
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+K H V D + + Y F S G D+ +W +P++ H ++VNC ++
Sbjct: 582 YKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLADVNCTRYH 637
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P + ++ ATGS D+TV+L+D+ + F HK + + ++P N LA+ R+
Sbjct: 638 PNSNYV-ATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRV 694
Query: 343 MVWDL 347
++WD+
Sbjct: 695 LLWDI 699
Score = 42 (19.8 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 52 DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP-LDDSE 93
+ EE K +K +G+ + + +PN ++ LP L DS+
Sbjct: 395 ENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSD 437
Score = 37 (18.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 55 EPPGKDYSVQKMILGTHTSENEPNYLMLAQVQ 86
EPPG SV + G+ + P + V+
Sbjct: 163 EPPGTGASVTSVFSGSASGPAAPGKVASVAVE 194
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 182 (69.1 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 48/181 (26%), Positives = 85/181 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K ++LS D +WD + EA Q F H DV W
Sbjct: 274 HKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW- 325
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
++ F S D + + L +PV++ H +EVN + ++P + +LA+ S D
Sbjct: 326 -QNNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDM 380
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ T +H +H +E++ + W NP + +LAS + +WD+
Sbjct: 381 TLKIWSMKQ-DTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVD 439
Query: 349 R 349
R
Sbjct: 440 R 440
Score = 144 (55.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 61/247 (24%), Positives = 103/247 (41%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-- 231
LRGH +E + +W+ + L SGS D+ +W++N + S + + + EG +
Sbjct: 174 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVP 232
Query: 232 ---DVA---WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
DV W+ L + D + IW T ++ H+ + L +N
Sbjct: 233 SNKDVTSLDWN-SDGTLLATGSYDGFARIW---TED-GNLASTLGQHKGPIFALKWNKKG 287
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
+IL+ G DKT ++D A F H V W +N T ASC + V
Sbjct: 288 NYILSAG-VDKTTIIWDAHT-GEAKQQFPFHSAPALDVDW--QNNTTFASCSTDMCIHVC 343
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
L D P + GHT++++ W+P +++S ++D L+IW M
Sbjct: 344 RLGC-----------DRPVKTF---QGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMK 388
Query: 406 ENI-YHD 411
++ HD
Sbjct: 389 QDTCVHD 395
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 46/187 (24%), Positives = 84/187 (44%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEA--MQI 222
G P +GH+ E + W G LL+ SDD + +W + L+A +I
Sbjct: 346 GCDRPVKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEI 403
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD+ V + ++ HQ V +AF+
Sbjct: 404 YTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDR-GVC--IHTLTKHQEPVYSVAFS 460
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P ++ LA+GS DK V +++ + T +H++ +F+V WN + + + AS G +
Sbjct: 461 PDGKY-LASGSFDKCVHIWNTQS-GTLVHSYRG-TGGIFEVCWNARGDKVGASASDGS-V 516
Query: 343 MVWDLSR 349
V DL +
Sbjct: 517 CVLDLRK 523
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 42/183 (22%), Positives = 77/183 (42%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + Y+ S G D+ +IWD T Q H + L + N
Sbjct: 274 HKGPIFALKWNKKGNYIL-SAGVDKTTIIWDAHTGEAK---QQFPFHSAPA--LDVDWQN 327
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + TF H EV + W+P +LASC L +W
Sbjct: 328 NTTFASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIW 385
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T + NP + +++S + D+ +++W +
Sbjct: 386 SMK---QDTCVHDLQAHSKEIYTIKWSPTGPGTS---NPNSNIMLASASFDSTVRLWDVD 439
Query: 406 ENI 408
+
Sbjct: 440 RGV 442
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 182 (69.1 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 48/181 (26%), Positives = 85/181 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K ++LS D +WD + EA Q F H DV W
Sbjct: 279 HKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW- 330
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
++ F S D + + L +PV++ H +EVN + ++P + +LA+ S D
Sbjct: 331 -QNNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDM 385
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ T +H +H +E++ + W NP + +LAS + +WD+
Sbjct: 386 TLKIWSMKQ-DTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE 444
Query: 349 R 349
R
Sbjct: 445 R 445
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 73/290 (25%), Positives = 118/290 (40%)
Query: 136 QNPFLIATKTVSAEVYVFDYSKHPSKP-PLDGACS-PDLR---LRGHSTEGYGLSWSKFK 190
QNP TV+ E + SKP +DG P + LRGH +E + +W+
Sbjct: 136 QNPPKNGEATVNGEENGAHAINNHSKPMEIDGDVEIPPSKATVLRGHESEVFICAWNPVS 195
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-----DVA---WHLRHEYL 242
+ L SGS D+ +W++N S + + + EG + DV W+ L
Sbjct: 196 D-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN-SDGTL 253
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+ D + IW T ++ H+ + L +N +IL+ G DKT ++D
Sbjct: 254 LATGSYDGFARIW---TED-GNLASTLGQHKGPIFALKWNKKGNYILSAG-VDKTTIIWD 308
Query: 303 LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362
A F H V W +N T ASC + V L D
Sbjct: 309 AHT-GEAKQQFPFHSAPALDVDW--QNNTTFASCSTDMCIHVCRLGC-----------DR 354
Query: 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI-YHD 411
P + GHT++++ W+P +++S ++D L+IW M ++ HD
Sbjct: 355 PVKTF---QGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDTCVHD 400
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/135 (27%), Positives = 64/135 (47%)
Query: 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279
++ F+ H V + W L S DD L IW ++ + V + AH E+ +
Sbjct: 356 VKTFQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSMKQDTC---VHDLQAHSKEIYTI 411
Query: 280 AF--------NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331
+ NP + +LA+ S D TV+L+D+ + LHT H+E V+ V ++P +
Sbjct: 412 KWSPTGPATSNPNSSIMLASASFDSTVRLWDVER-GVCLHTLTKHQEPVYSVAFSPDGK- 469
Query: 332 ILASCCLGRRLMVWD 346
LAS + + +W+
Sbjct: 470 YLASGSFDKCVHIWN 484
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 42/183 (22%), Positives = 76/183 (41%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + Y+ S G D+ +IWD T Q H + L + N
Sbjct: 279 HKGPIFALKWNKKGNYIL-SAGVDKTTIIWDAHTGEAK---QQFPFHSAPA--LDVDWQN 332
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + TF H EV + W+P +LASC L +W
Sbjct: 333 NTTFASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIW 390
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T + NP +++S + D+ +++W +
Sbjct: 391 SMK---QDTCVHDLQAHSKEIYTIKWSPTGPATS---NPNSSIMLASASFDSTVRLWDVE 444
Query: 406 ENI 408
+
Sbjct: 445 RGV 447
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 177 (67.4 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 56/232 (24%), Positives = 102/232 (43%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
GH ++WS +L S S DA C+W N E + + HE V+ VAW
Sbjct: 59 GHQRTVRKVAWSPCGN-YLASASFDATTCIWKKN----QDDFECVTTLEGHENEVKSVAW 113
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
L + D+ + +W++ + V + +H +V + ++P E +LA+ S D
Sbjct: 114 APSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQE-LLASASYD 171
Query: 296 KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354
TVKL+ T + H+ V+ + ++P + LASC R + +W EQ
Sbjct: 172 DTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR-LASCSDDRTVRIWRQYLPGNEQ 230
Query: 355 TPEDAEDGPPE--LLFIHGGHTSKISDFSWNPCE-DWVISSVAEDNILQIWQ 403
+ P + + G HT I D +W C+ +++ D+ +++++
Sbjct: 231 GVACSGSDPSWKCICTLSGFHTRTIYDVAW--CQLTGALATACGDDAIRVFE 280
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPS-VSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
+AW+ L S G D+ + IW S + K V S HQ V +A++P + LA+
Sbjct: 22 LAWNPSGT-LLASCGGDRKIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNY-LAS 78
Query: 292 GSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
S D T ++ + + T + H+ EV V W P +LA+C + + VW+ +
Sbjct: 79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWE---V 134
Query: 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
DEE E + + HT + W+P ++ +++S + D+ ++++Q
Sbjct: 135 DEEDEYE--------CVSVLSSHTQDVKHVVWHPSQE-LLASASYDDTVKLYQ 178
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 58/241 (24%), Positives = 106/241 (43%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GH E ++W+ G+LL+ S D + +W+++ + E + + H V+
Sbjct: 101 LEGHENEVKSVAWAP--SGNLLATCSRDKSVWVWEVD---EEDEYECVSVLSSHTQDVKH 155
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
V WH E L + DD L + V ++ H+S V +AF+P + LA+
Sbjct: 156 VVWHPSQELLASASYDDTVKLYQEEGDDWVC--CATLEGHESTVWSIAFDPSGQR-LASC 212
Query: 293 STDKTVKLFDL----RKISTALHTFDSHKEEVFQV-GWNPKNETILASCCLGRRLMVW-- 345
S D+TV+++ + A D + + + G++ + +A C L L
Sbjct: 213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGALATACG 272
Query: 346 -DLSRIDEEQTPEDAEDGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
D R+ EE D + P L H H+ ++ +WNP E +++S ++D + W
Sbjct: 273 DDAIRVFEEDPGSDPQQ-PTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331
Query: 403 Q 403
+
Sbjct: 332 E 332
>MGI|MGI:2685187 [details] [associations]
symbol:Sec31b "Sec31 homolog B (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0044432 "endoplasmic reticulum part" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2685187 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 GeneTree:ENSGT00390000003175 CTD:25956
OMA:RLECLYE OrthoDB:EOG470TGM EMBL:AK158017 EMBL:AC151478
EMBL:BC042701 IPI:IPI00667569 IPI:IPI00854010 RefSeq:NP_001028515.1
UniGene:Mm.329873 ProteinModelPortal:Q3TZ89 SMR:Q3TZ89
PhosphoSite:Q3TZ89 PaxDb:Q3TZ89 PRIDE:Q3TZ89
Ensembl:ENSMUST00000063632 Ensembl:ENSMUST00000111985 GeneID:240667
KEGG:mmu:240667 UCSC:uc008hpu.1 UCSC:uc012bmg.1 InParanoid:Q3TZ89
NextBio:384667 Bgee:Q3TZ89 CleanEx:MM_SEC31B Genevestigator:Q3TZ89
Uniprot:Q3TZ89
Length = 1158
Score = 185 (70.2 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 48/179 (26%), Positives = 89/179 (49%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN--AAPKNKSLEAMQIFKVHEGVVEDVA 234
H+ L ++ F+ L SG+ D++I +WD+N + P ++ E + + ++
Sbjct: 120 HTGAVRALDFNPFQGNLLASGASDSEIFIWDLNHLSVPMTPGPKSQN---PPEDI-KALS 175
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNC--LAFNPFNEWILATG 292
W+L+ +++ S ++WDLR ++P+ V +H S +NC LA+NP L
Sbjct: 176 WNLQVQHILASAHPSGKAVVWDLRK---NEPIIKVSSHSSRMNCSGLAWNPDIATQLVLC 232
Query: 293 STDK---TVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
S D ++L+DLR S+ L +SH + + WN + +L S ++ W+LS
Sbjct: 233 SEDDQLPVIQLWDLRFASSPLKVLESHSRGILSMSWNQADAELLLSTAKDSQIFCWNLS 291
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 176 (67.0 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 57/236 (24%), Positives = 104/236 (44%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
GH ++WS +L S S DA C+W N E + + HE V+ VAW
Sbjct: 59 GHQRTVRKVAWSPCGN-YLASASFDATTCIWKKN----QDDFECVTTLEGHENEVKSVAW 113
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
L + D+ + +W++ + V + +H +V + ++P E +LA+ S D
Sbjct: 114 APSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE-LLASASYD 171
Query: 296 KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354
TVKL+ + T + H+ V+ + ++P + LASC R + +W EQ
Sbjct: 172 DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRIWRQYLPGNEQ 230
Query: 355 TPEDAEDGPPE--LLFIHGGHTSKISDFSWNPCE-DWVISSVAEDNILQIWQMAEN 407
+ P + + G H+ I D +W C+ +++ D+ ++++Q N
Sbjct: 231 GVACSGSDPSWKCICTLSGFHSRTIYDIAW--CQLTGALATACGDDAIRVFQEDPN 284
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/240 (23%), Positives = 106/240 (44%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GH E ++W+ G+LL+ S D + +W+++ + E + + H V+
Sbjct: 101 LEGHENEVKSVAWAP--SGNLLATCSRDKSVWVWEVD---EEDEYECVSVLNSHTQDVKH 155
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
V WH E L + DD L + V ++ H+S V LAF+P + LA+
Sbjct: 156 VVWHPSQELLASASYDDTVKLYREEEDDWVC--CATLEGHESTVWSLAFDPSGQR-LASC 212
Query: 293 STDKTVKLFDL----RKISTALHTFDSHKEEVFQV-GWNPKNETILASCCLGRRLMVW-- 345
S D+TV+++ + A D + + + G++ + +A C L L
Sbjct: 213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG 272
Query: 346 -DLSRIDEEQTPEDAEDGPPELL-FIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
D R+ +E D + L +H H+ ++ +WNP E +++S ++D + W+
Sbjct: 273 DDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 49/190 (25%), Positives = 89/190 (46%)
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPS-VSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
+AW+ L S G D+ + IW S + K V S HQ V +A++P + LA+
Sbjct: 22 LAWNPAGT-LLASCGGDRRIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNY-LAS 78
Query: 292 GSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
S D T ++ + + T + H+ EV V W P +LA+C + + VW+ +
Sbjct: 79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWE---V 134
Query: 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410
DEE E + + HT + W+P ++ +++S + D+ +++++ E+ +
Sbjct: 135 DEEDEYE--------CVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWV 185
Query: 411 DEDDLPGDES 420
L G ES
Sbjct: 186 CCATLEGHES 195
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 175 (66.7 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 63/233 (27%), Positives = 107/233 (45%)
Query: 163 PLDGACSPDLRLRGHSTEGYGLSWSKFK-EGHLL-SGSDDAQICLWDINAAPKNKSLEAM 220
P + +P + + ++ +S KF +G LL S S D I + IN + E +
Sbjct: 6 PATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTI-NDPIAEPV 64
Query: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280
Q F HE + DVA+ ++ S DD+ L +WD+ T S+ +++++ H + C+
Sbjct: 65 QEFTGHENGISDVAFSSDARFIV-SASDDKTLKLWDVETGSL---IKTLIGHTNYAFCVN 120
Query: 281 FNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR 340
FNP + I++ GS D+TV+++D+ L +H + V V +N I++S G
Sbjct: 121 FNPQSNMIVS-GSFDETVRIWDVTT-GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 178
Query: 341 RLMVWDLSRIDEEQTPEDAEDGPPELL-FIHGGHTSKISDFSWNPCEDWVISS 392
+WD +T D E+ P + F G + N W ISS
Sbjct: 179 -CRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLD-NTLRLWNISS 229
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 56/176 (31%), Positives = 85/176 (48%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
LRGH Y + G LLS S+D I WD+ S +++ H V D+
Sbjct: 334 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLG------SFTNTVLYQGHAYPVWDL 386
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDL-RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
H F S D+ +W RT P++ H ++V+C+ F+P N LATG
Sbjct: 387 DIS-PHSLYFASASHDRTARLWSFDRT----YPLRIYAGHLADVDCVKFHP-NSNYLATG 440
Query: 293 STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
STDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +WDL+
Sbjct: 441 STDKTVRLWSTQQ-GNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLA 494
Score = 128 (50.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 32/112 (28%), Positives = 60/112 (53%)
Query: 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L +GS D + LW ++++F H G V +A+ +YL S G+DQ L
Sbjct: 436 YLATGSTDKTVRLWSTQQG------NSVRLFTGHRGPVLSLAFSPNGKYL-ASAGEDQRL 488
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
+WDL + ++ K ++ H + L F+P + ++A+ S D +V+++D+R
Sbjct: 489 KLWDLASGTLYKELRG---HTDNITSLTFSPDSS-LVASASMDNSVRVWDIR 536
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 56/232 (24%), Positives = 102/232 (43%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
GH ++WS +L S S DA C+W N E + + HE V+ VAW
Sbjct: 59 GHQRTVRKVAWSPCGN-YLASASFDATTCIWKKN----QDDFECVTTLEGHENEVKSVAW 113
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
L + D+ + +W++ + V + +H +V + ++P E +LA+ S D
Sbjct: 114 APSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE-LLASASYD 171
Query: 296 KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354
TVKL+ T + H+ V+ + ++P + LASC R + +W EQ
Sbjct: 172 DTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR-LASCSDDRTVRIWRQYLPGNEQ 230
Query: 355 TPEDAEDGPPE--LLFIHGGHTSKISDFSWNPCE-DWVISSVAEDNILQIWQ 403
+ P + + G HT I D +W C+ +++ D+ +++++
Sbjct: 231 GVACSGSDPSWKCVCTLSGFHTRTIYDVAW--CQLTGALATACGDDAIRVFE 280
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPS-VSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
+AW+ L S G D+ + IW S + K V S HQ V +A++P + LA+
Sbjct: 22 LAWNPTGT-LLASCGGDRKIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNY-LAS 78
Query: 292 GSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
S D T ++ + + T + H+ EV V W P +LA+C + + VW+ +
Sbjct: 79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWE---V 134
Query: 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
DEE E + + HT + W+P ++ +++S + D+ ++++Q
Sbjct: 135 DEEDEYE--------CVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYQ 178
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 59/241 (24%), Positives = 106/241 (43%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GH E ++W+ G+LL+ S D + +W+++ + E + + H V+
Sbjct: 101 LEGHENEVKSVAWAP--SGNLLATCSRDKSVWVWEVD---EEDEYECVSVLNSHTQDVKH 155
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
V WH E L + DD L + V ++ H+S V +AF+P + LA+
Sbjct: 156 VVWHPSQELLASASYDDTVKLYQEEGDDWVC--CATLEGHESTVWSIAFDPSGQR-LASC 212
Query: 293 STDKTVKLFDL----RKISTALHTFDSHKEEVFQV-GWNPKNETILASCCLGRRLMVW-- 345
S D+TV+++ + A D + V + G++ + +A C L L
Sbjct: 213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGALATACG 272
Query: 346 -DLSRIDEEQTPEDAEDGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
D R+ EE D + P L H H+ ++ +WNP E +++S ++D + W
Sbjct: 273 DDAIRVFEEDPGSDPQQ-PTFSLTAHLRQAHSQDVNCVAWNPKEAGLLASCSDDGEVAFW 331
Query: 403 Q 403
+
Sbjct: 332 E 332
>UNIPROTKB|E1BWN6 [details] [associations]
symbol:CORO2A "Coronin" species:9031 "Gallus gallus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:7464 OMA:LLQMFYR EMBL:AADN02060086
EMBL:AADN02060087 IPI:IPI00680995 RefSeq:XP_424946.3
UniGene:Gga.52392 Ensembl:ENSGALT00000002987 GeneID:427373
KEGG:gga:427373 Uniprot:E1BWN6
Length = 522
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 60/204 (29%), Positives = 98/204 (48%)
Query: 173 RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI--NAAPKNKSLEAMQIFKVHEGVV 230
R+ GH + W+ F + + S S+DA + +WDI + KN + ++ H V
Sbjct: 77 RICGHKGNVLDIKWNPFNDFVIASCSEDATVKIWDIPKHLLTKNITTPKKELLG-HARRV 135
Query: 231 EDVAWH-LRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVNCLAFNPFNEW 287
+ WH + LF S G D ++IW+L T +S PV+ + AH+ V ++FN
Sbjct: 136 GLIEWHPTANNILFSS-GHDYKIMIWNLDTREDVLSNPVKILDAHKDVVLSMSFNTDGS- 193
Query: 288 ILATGSTDKTVKLFDLRKISTALH--TFDSHK-EEVFQVGWNPKNETILASCCLGRRLMV 344
+LAT DK ++L D R T L ++ +H+ +V +G K + S R++ +
Sbjct: 194 LLATACRDKKIRLIDPRA-RTVLQEASYKAHRANKVLFLGNMKKLLSTGTSRWNNRQIAL 252
Query: 345 WDLSRIDEEQTPEDAEDGPPELLF 368
WD + + ED DG LLF
Sbjct: 253 WDQNDLSVPLLEEDL-DGSSGLLF 275
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 45/168 (26%), Positives = 74/168 (44%)
Query: 210 AAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268
AA K K + + I VH+ V H + G +L+I +T +
Sbjct: 19 AASKEKCYDCVPITHSVHDNHFCAVNPHFI-AVVTECAGGGAFLVIPIHQTGKLDPHYPR 77
Query: 269 VVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRK------ISTALHTFDSHKEEVFQ 322
+ H+ V + +NPFN++++A+ S D TVK++D+ K I+T H V
Sbjct: 78 ICGHKGNVLDIKWNPFNDFVIASCSEDATVKIWDIPKHLLTKNITTPKKELLGHARRVGL 137
Query: 323 VGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ W+P IL S ++M+W+L T ED P ++L H
Sbjct: 138 IEWHPTANNILFSSGHDYKIMIWNLD------TREDVLSNPVKILDAH 179
Score = 118 (46.6 bits), Expect = 0.00064, P = 0.00064
Identities = 47/190 (24%), Positives = 87/190 (45%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H G V ++ P N F+IA+ + A V ++D KH + +P L GH+
Sbjct: 81 HKGNVLDIKWNPFNDFVIASCSEDATVKIWDIPKHLLTKNIT---TPKKELLGHARRVGL 137
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+ W L S D +I +W+++ S ++I H+ VV ++++ L
Sbjct: 138 IEWHPTANNILFSSGHDYKIMIWNLDTREDVLS-NPVKILDAHKDVVLSMSFNTDGSLLA 196
Query: 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST---DKTVKL 300
+ D + LI D R +V + S AH++ N + F + +L+TG++ ++ + L
Sbjct: 197 TACRDKKIRLI-DPRARTVLQEA-SYKAHRA--NKVLFLGNMKKLLSTGTSRWNNRQIAL 252
Query: 301 FDLRKISTAL 310
+D +S L
Sbjct: 253 WDQNDLSVPL 262
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 185 (70.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 53/185 (28%), Positives = 93/185 (50%)
Query: 164 LDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI 222
+D + +L+ L GHS YG S+S + +LLS S+D + LW + ++ +
Sbjct: 508 MDEKTASELKILYGHSGPVYGTSFSPDRN-YLLSCSEDGTVRLWSL------QTFTCLVG 560
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+K H V D + + Y F S G D+ +W +P++ H ++V C F+
Sbjct: 561 YKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLW---ATDHYQPLRIFAGHLADVTCTRFH 616
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P + +I ATGS D+TV+L+D+ + F HK + + ++P N LA+ R+
Sbjct: 617 PNSNYI-ATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLAFSP-NGRFLATGATDGRV 673
Query: 343 MVWDL 347
++WD+
Sbjct: 674 LLWDI 678
Score = 124 (48.7 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 45/185 (24%), Positives = 84/185 (45%)
Query: 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA 234
+GH+ + +S + + +SG D LW + + ++IF H V
Sbjct: 562 KGHNYPVWDTQFSPYGY-YFVSGGHDRVARLWATD------HYQPLRIFAGHLADVTCTR 614
Query: 235 WHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+H Y+ GS D+ + +WD+ + V+ H+ ++ LAF+P N LATG+
Sbjct: 615 FHPNSNYIATGSA--DRTVRLWDVLNGNC---VRIFTGHKGPIHSLAFSP-NGRFLATGA 668
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
TD V L+D+ + H + ++ + ++ E ILAS + + +WD + E+
Sbjct: 669 TDGRVLLWDIGH-GLMVGELKGHTDTIYALRFSRDGE-ILASGSMDNTVRLWDAVKAFED 726
Query: 354 QTPED 358
+D
Sbjct: 727 LETDD 731
Score = 40 (19.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 52 DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP-LDDSE 93
+ EE K ++ +G+ + + +PN ++ LP L DS+
Sbjct: 374 ENEEGKPKKKKAKRDSVGSKSKKQDPNAPPQNRIPLPELKDSD 416
>UNIPROTKB|F1SSG3 [details] [associations]
symbol:CORO2A "Coronin" species:9823 "Sus scrofa"
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:LLQMFYR EMBL:CU302382 EMBL:CU074406
RefSeq:XP_003122082.1 UniGene:Ssc.90840 Ensembl:ENSSSCT00000005915
GeneID:100511910 KEGG:ssc:100511910 Uniprot:F1SSG3
Length = 525
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 55/198 (27%), Positives = 92/198 (46%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVA 234
GH + W+ F + + S S+DA I +WDI K+L A + V H V V
Sbjct: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWDIPKQLMTKNLTACKKELVGHARRVGLVE 139
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
WH + S G D +++W+L T + PV+++ HQ + ++FN N +LAT
Sbjct: 140 WHPTAANILFSSGYDYKVMVWNLDTKESVIMSPVRTITCHQDVILSMSFNT-NGSLLATA 198
Query: 293 STDKTVKLFDLRKISTALH-TFDSHK-EEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
D+ +++ D R + ++ H+ +V +G K + S R++ +WD +
Sbjct: 199 CKDRKIRVLDPRAGAVLQEASYKGHRANKVLFLGNLKKLLSTGTSRWNNRQMALWDQDDL 258
Query: 351 DEEQTPEDAEDGPPELLF 368
T ED DG +LF
Sbjct: 259 SVPLTEEDL-DGSSGVLF 275
>UNIPROTKB|E1C100 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AADN02045784
EMBL:AADN02045777 EMBL:AADN02045778 EMBL:AADN02045779
EMBL:AADN02045780 EMBL:AADN02045781 EMBL:AADN02045782
EMBL:AADN02045783 IPI:IPI00574117 RefSeq:XP_424742.1
UniGene:Gga.11058 ProteinModelPortal:E1C100
Ensembl:ENSGALT00000023755 GeneID:427153 KEGG:gga:427153
NextBio:20828454 Uniprot:E1C100
Length = 399
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/225 (25%), Positives = 104/225 (46%)
Query: 191 EG-HLLSGSDDAQICLWDI-NAAPK-NKSLEAM-QIFKVHEGV----VEDVAWHLRHEYL 242
EG ++LSG D I L+D+ N + K N + +A+ + + H VE V W+ +
Sbjct: 55 EGRYMLSGGSDGVIVLYDLENLSRKPNYTCKALCSVGRSHPDAHKFSVETVQWYPHDTGM 114
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF--NEWILATGSTDKTVKL 300
F S D+ L IWD T +P V + V +P ++A G+ V+L
Sbjct: 115 FTSSSFDKTLKIWDTNT---LQPAD-VFQFEGTVYSHHMSPVATKHCLIAVGTKSPKVQL 170
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
DL+ S + H H++EV V W+P++E +LA+ ++ +WD+ R T D
Sbjct: 171 CDLKSGSCS-HILQGHRQEVLAVSWSPRHEYVLATASADSKVKLWDVRRASGCLTTLDQH 229
Query: 361 DGPPELLF---IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+G ++ H +++ + + + +V D+ +++W
Sbjct: 230 NGEKSKASSEAVNTAHNGRVNGLCYTS-DGLHLLTVGTDDRMRLW 273
Score = 134 (52.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+ W G S S D + +WD N +L+ +F+ V + ++
Sbjct: 105 VQWYPHDTGMFTSSSFDKTLKIWDTN------TLQPADVFQFEGTVYSHHMSPVATKHCL 158
Query: 244 GSVGDDQ-YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+VG + + DL++ S S +Q H+ EV ++++P +E++LAT S D VKL+D
Sbjct: 159 IAVGTKSPKVQLCDLKSGSCSHILQG---HRQEVLAVSWSPRHEYVLATASADSKVKLWD 215
Query: 303 LRKISTALHTFDSHKEE 319
+R+ S L T D H E
Sbjct: 216 VRRASGCLTTLDQHNGE 232
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K ++LS D +WD + EA Q F H DV W
Sbjct: 271 HKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW- 322
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
++ F S D + + L +PV++ H +EVN + ++P + +LA+ S D
Sbjct: 323 -QNNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDM 377
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H++E++ + W NP + +LAS + +WD+
Sbjct: 378 TLKIWSMKQ-DACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDME 436
Query: 349 R 349
+
Sbjct: 437 Q 437
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 70/290 (24%), Positives = 118/290 (40%)
Query: 128 VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR--LRGHSTEGYGLS 185
V A QNP V+ + ++SK P + D P+ LRGH +E + +
Sbjct: 124 VTPATVSQQNPPKNQEAIVNGAHAINNHSK-PMEIDGDVEIPPNKATVLRGHESEVFICA 182
Query: 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-----DVA---WHL 237
W+ + L SGS D+ +W++N S + + + EG + DV W+
Sbjct: 183 WNPVSD-LLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPSNKDVTSLDWN- 240
Query: 238 RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKT 297
L + D + IW T + ++ H+ + L +N +IL+ G DKT
Sbjct: 241 SDGTLLATGSYDGFARIW---TEN-GNLASTLGQHKGPIFALKWNKKGNYILSAG-VDKT 295
Query: 298 VKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357
++D A F H V W +N T ASC + V L
Sbjct: 296 TIIWDAHT-GEAKQQFPFHSAPALDVDW--QNNTTFASCSTDMCIHVCRLGC-------- 344
Query: 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
D P + GHT++++ W+P +++S ++D L+IW M ++
Sbjct: 345 ---DRPVKTF---QGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQD 387
Score = 135 (52.6 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 44/187 (23%), Positives = 83/187 (44%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDI--NAAPKNKSLEAMQI 222
G P +GH+ E + W G LL+ SDD + +W + +A N +I
Sbjct: 343 GCDRPVKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEI 400
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD+ + ++ HQ V +AF+
Sbjct: 401 YTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRK---HQEPVYSVAFS 457
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P ++ LA+GS DK V +++ + + +H++ +F+V WN + + + AS G +
Sbjct: 458 PDGKY-LASGSFDKCVHIWNTQS-GSLVHSYQG-TGGIFEVCWNAQGDKVGASASDGS-V 513
Query: 343 MVWDLSR 349
V DL +
Sbjct: 514 CVLDLRK 520
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 42/183 (22%), Positives = 77/183 (42%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + Y+ S G D+ +IWD T Q H + L + N
Sbjct: 271 HKGPIFALKWNKKGNYIL-SAGVDKTTIIWDAHTGEAK---QQFPFHSAPA--LDVDWQN 324
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + TF H EV + W+P +LASC L +W
Sbjct: 325 NTTFASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIW 382
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ + + E+ I T + NP +++S + D+ +++W M
Sbjct: 383 SMK---QDACVHNLQAHRKEIYTIKWSPTGPTTS---NPNSSIMLASASFDSTVRLWDME 436
Query: 406 ENI 408
+ +
Sbjct: 437 QGV 439
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/181 (25%), Positives = 84/181 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K ++LS D +WD + EA Q F H DV W
Sbjct: 278 HKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW- 329
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
++ F S D + + L +PV++ H +EVN + ++P + +LA+ S D
Sbjct: 330 -QNNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDM 384
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP + +LAS + +WD+
Sbjct: 385 TLKIWSMKQ-DACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVE 443
Query: 349 R 349
R
Sbjct: 444 R 444
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 73/290 (25%), Positives = 118/290 (40%)
Query: 136 QNPFLIATKTVSAEVYVFDYSKHPSKP-PLDGACS-PDLR---LRGHSTEGYGLSWSKFK 190
QNP TV+ E + SKP +DG P + LRGH +E + +W+
Sbjct: 135 QNPPKNGEATVNGEENGAHAINNHSKPMEIDGDVEIPPSKATVLRGHESEVFICAWNPVS 194
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-----DVA---WHLRHEYL 242
+ L SGS D+ +W++N S + + + EG + DV W+ L
Sbjct: 195 D-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN-SDGTL 252
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+ D + IW T ++ H+ + L +N +IL+ G DKT ++D
Sbjct: 253 LATGSYDGFARIW---TED-GNLASTLGQHKGPIFALKWNKKGNYILSAG-VDKTTIIWD 307
Query: 303 LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362
A F H V W +N T ASC + V L D
Sbjct: 308 AHT-GEAKQQFPFHSAPALDVDW--QNNTTFASCSTDMCIHVCRLGC-----------DR 353
Query: 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI-YHD 411
P + GHT++++ W+P +++S ++D L+IW M ++ HD
Sbjct: 354 PVKTF---QGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHD 399
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDI--NAAPKNKSLEAMQI 222
G P +GH+ E + W G LL+ SDD + +W + +A + + +I
Sbjct: 350 GCDRPVKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEI 407
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD+ V + ++ HQ V +AF+
Sbjct: 408 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVER-GVC--IHTLTKHQEPVYSVAFS 464
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P ++ LA+GS DK V +++ + + +H++ +F+V WN + + + AS G +
Sbjct: 465 PDGKY-LASGSFDKCVHIWNTQS-GSLVHSYRG-TGGIFEVCWNARGDKVGASASDGS-V 520
Query: 343 MVWDLSR 349
V DL +
Sbjct: 521 CVLDLRK 527
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 42/183 (22%), Positives = 77/183 (42%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + Y+ S G D+ +IWD T Q H + L + N
Sbjct: 278 HKGPIFALKWNKKGNYIL-SAGVDKTTIIWDAHTGEAK---QQFPFHSAPA--LDVDWQN 331
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + TF H EV + W+P +LASC L +W
Sbjct: 332 NTTFASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIW 389
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T + NP + +++S + D+ +++W +
Sbjct: 390 SMK---QDACVHDLQAHSKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDVE 443
Query: 406 ENI 408
+
Sbjct: 444 RGV 446
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/181 (25%), Positives = 84/181 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K ++LS D +WD + EA Q F H DV W
Sbjct: 278 HKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW- 329
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
++ F S D + + L +PV++ H +EVN + ++P + +LA+ S D
Sbjct: 330 -QNNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDM 384
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP + +LAS + +WD+
Sbjct: 385 TLKIWSMKQ-DACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVE 443
Query: 349 R 349
R
Sbjct: 444 R 444
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 73/290 (25%), Positives = 118/290 (40%)
Query: 136 QNPFLIATKTVSAEVYVFDYSKHPSKP-PLDGACS-PDLR---LRGHSTEGYGLSWSKFK 190
QNP TV+ E + SKP +DG P + LRGH +E + +W+
Sbjct: 135 QNPPKNGEATVNGEENGAHAINNHSKPMEIDGDVEIPPSKATVLRGHESEVFICAWNPVS 194
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-----DVA---WHLRHEYL 242
+ L SGS D+ +W++N S + + + EG + DV W+ L
Sbjct: 195 D-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN-SDGTL 252
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+ D + IW T ++ H+ + L +N +IL+ G DKT ++D
Sbjct: 253 LATGSYDGFARIW---TED-GNLASTLGQHKGPIFALKWNKKGNYILSAG-VDKTTIIWD 307
Query: 303 LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362
A F H V W +N T ASC + V L D
Sbjct: 308 AHT-GEAKQQFPFHSAPALDVDW--QNNTTFASCSTDMCIHVCRLGC-----------DR 353
Query: 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI-YHD 411
P + GHT++++ W+P +++S ++D L+IW M ++ HD
Sbjct: 354 PVKTF---QGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHD 399
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDI--NAAPKNKSLEAMQI 222
G P +GH+ E + W G LL+ SDD + +W + +A + + +I
Sbjct: 350 GCDRPVKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEI 407
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD+ V + ++ HQ V +AF+
Sbjct: 408 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVER-GVC--IHTLTKHQEPVYSVAFS 464
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P ++ LA+GS DK V +++ + + +H++ +F+V WN + + + AS G +
Sbjct: 465 PDGKY-LASGSFDKCVHIWNTQS-GSLVHSYRG-TGGIFEVCWNARGDKVGASASDGS-V 520
Query: 343 MVWDLSR 349
V DL +
Sbjct: 521 CVLDLRK 527
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 42/183 (22%), Positives = 77/183 (42%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + Y+ S G D+ +IWD T Q H + L + N
Sbjct: 278 HKGPIFALKWNKKGNYIL-SAGVDKTTIIWDAHTGEAK---QQFPFHSAPA--LDVDWQN 331
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + TF H EV + W+P +LASC L +W
Sbjct: 332 NTTFASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIW 389
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T + NP + +++S + D+ +++W +
Sbjct: 390 SMK---QDACVHDLQAHSKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDVE 443
Query: 406 ENI 408
+
Sbjct: 444 RGV 446
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 61/221 (27%), Positives = 101/221 (45%)
Query: 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR-LRGHSTEGYGLSWSK 188
R++ + P L+ + + D + D + +++ LRGH Y +
Sbjct: 298 RSKKLKSEPHLVDVSRIRLACDILDEEEEE-----DDSAGTEMKILRGHCGPVYSTRFLS 352
Query: 189 FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD 248
G LLS S+D I WD+ +S +++ H V D+ Y F S
Sbjct: 353 DSSG-LLSCSEDMSIRYWDL------RSFTNTVLYQGHAYPVWDLDISPCSLY-FASASH 404
Query: 249 DQYLLIWDL-RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS 307
D+ +W RT P++ H +V+C+ F+P N LATGSTDKTV+L+ ++
Sbjct: 405 DRTARLWSFDRT----YPLRIYAGHLLDVDCVKFHP-NSNYLATGSTDKTVRLWSTQQ-G 458
Query: 308 TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
++ F H+ V + ++P N LAS +RL +WDL+
Sbjct: 459 NSVRLFTGHRGPVLALAFSP-NGKYLASAGEDQRLKLWDLA 498
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 32/112 (28%), Positives = 60/112 (53%)
Query: 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L +GS D + LW ++++F H G V +A+ +YL S G+DQ L
Sbjct: 440 YLATGSTDKTVRLWSTQQG------NSVRLFTGHRGPVLALAFSPNGKYL-ASAGEDQRL 492
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
+WDL + ++ K ++ H + L F+P + ++A+ S D +V+++D+R
Sbjct: 493 KLWDLASGTLYKELRG---HTDNITSLTFSPDSS-LIASASMDNSVRVWDIR 540
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 39/125 (31%), Positives = 65/125 (52%)
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
N LATGSTDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +
Sbjct: 437 NSNYLATGSTDKTVRLWSTQQ-GNSVRLFTGHRGPVLALAFSP-NGKYLASAGEDQRLKL 494
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
WDL+ + EL GHT I+ +++P + +I+S + DN +++W +
Sbjct: 495 WDLASGTLYK----------ELR----GHTDNITSLTFSP-DSSLIASASMDNSVRVWDI 539
Query: 405 AENIY 409
N Y
Sbjct: 540 -RNTY 543
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W++ K ++LS D +WD + EA Q F H DV W
Sbjct: 320 HKGPIFALKWNR-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW- 371
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
++ F S D + + L +PV++ H +EVN + ++P + +LA+ S D
Sbjct: 372 -QNNMTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDM 426
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP + +LAS + +WD+
Sbjct: 427 TLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIE 485
Query: 349 R 349
R
Sbjct: 486 R 486
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 72/291 (24%), Positives = 116/291 (39%)
Query: 136 QNPFLIATKTVSAEVY-VFDYSKHPSKPPLDGACS-PDLR---LRGHSTEGYGLSWSKFK 190
QNP TV+ E + H +DG P + LRGH +E + +W+
Sbjct: 177 QNPSKNREATVNGEENRAHSVNNHAKPMEIDGEVDIPSSKATVLRGHESEVFICAWNPVS 236
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-----DVA---WHLRHEYL 242
+ L SGS D+ +W++N S + + + EG + DV W+ L
Sbjct: 237 D-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLL 295
Query: 243 F-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLF 301
GS D + IW T ++ H+ + L +N +IL+ G DKT ++
Sbjct: 296 ATGSY--DGFARIW---TED-GNLASTLGQHKGPIFALKWNRKGNYILSAG-VDKTTIIW 348
Query: 302 DLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361
D A F H V W +N ASC + V L D
Sbjct: 349 DAHT-GEAKQQFPFHSAPALDVDW--QNNMTFASCSTDMCIHVCRLGC-----------D 394
Query: 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI-YHD 411
P + GHT++++ W+P +++S ++D L+IW M + + HD
Sbjct: 395 RPVKTF---QGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQEVCIHD 441
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 43/183 (23%), Positives = 77/183 (42%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + Y+ S G D+ +IWD T Q H + L + N
Sbjct: 320 HKGPIFALKWNRKGNYIL-SAGVDKTTIIWDAHTGEAK---QQFPFHSAPA--LDVDWQN 373
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + TF H EV + W+P +LASC L +W
Sbjct: 374 NMTFASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIW 431
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ +E D + E+ I T + NP + +++S + D+ +++W +
Sbjct: 432 SMK---QEVCIHDLQAHNKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDIE 485
Query: 406 ENI 408
+
Sbjct: 486 RGV 488
Score = 128 (50.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 44/187 (23%), Positives = 81/187 (43%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEA--MQI 222
G P +GH+ E + W G LL+ SDD + +W + L+A +I
Sbjct: 392 GCDRPVKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEI 449
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD+ + ++ HQ V +AF+
Sbjct: 450 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCT---HTLTKHQEPVYSVAFS 506
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P + LA+GS DK V +++ + +H++ +F+V WN + + + AS G +
Sbjct: 507 PDGRY-LASGSFDKCVHIWNTQS-GNLVHSYRG-TGGIFEVCWNARGDKVGASASDGS-V 562
Query: 343 MVWDLSR 349
V DL +
Sbjct: 563 CVLDLRK 569
>TAIR|locus:2087433 [details] [associations]
symbol:AT3G63460 "AT3G63460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016020 "membrane" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006007 "glucose catabolic process" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000230582 KO:K14005
InterPro:IPR009917 Pfam:PF07304 OMA:NQPPPMM EMBL:AY099702
EMBL:BT008435 IPI:IPI00547111 RefSeq:NP_851024.1 UniGene:At.22771
UniGene:At.67091 ProteinModelPortal:Q8L611 SMR:Q8L611 IntAct:Q8L611
STRING:Q8L611 PRIDE:Q8L611 ProMEX:Q8L611 EnsemblPlants:AT3G63460.1
GeneID:825521 KEGG:ath:AT3G63460 TAIR:At3g63460 InParanoid:Q8L611
PhylomeDB:Q8L611 ProtClustDB:CLSN2680494 ArrayExpress:Q8L611
Genevestigator:Q8L611 Uniprot:Q8L611
Length = 1104
Score = 180 (68.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 42/169 (24%), Positives = 79/169 (46%)
Query: 183 GLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-IFKVHEGVVEDVAWHLRHEY 241
GL ++ L SG+DD +IC+WD+ + ++ +G + ++W+ + +
Sbjct: 127 GLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQ 186
Query: 242 LFGSVGDDQYLLIWDLRTPSVSKPVQSVV-AHQSEVNCLAFNP-FNEWILATGSTDK--T 297
+ S + +IWDLR KP+ + + + + L +NP I+ D T
Sbjct: 187 ILASTSYNGTTVIWDLRK---QKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPT 243
Query: 298 VKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
+KL+D+R I + + F H+ V + W P + + L +C R + WD
Sbjct: 244 LKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
Score = 157 (60.3 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 66/271 (24%), Positives = 107/271 (39%)
Query: 143 TKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202
+ + + E++ D+ PL G R + G +F G + G D
Sbjct: 36 SSSANLEIFKLDFQSDDRDLPLVGEIPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGN 95
Query: 203 ICLWD----INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258
I LW+ I + P +L VH+G V + ++ L S DD + IWDL
Sbjct: 96 IDLWNPLSLIGSQPSENALVGH--LSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLL 153
Query: 259 TPSVSK--PVQ--SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD 314
PS P+ S A Q E++ +++N + ILA+ S + T ++DLRK ++ D
Sbjct: 154 KPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFAD 213
Query: 315 SHKEEVFQVGWNPKNET---ILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG 371
S + + WNP T + + L +WD+ I P F
Sbjct: 214 SVRRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMRNIMS-----------PVREFT-- 260
Query: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
GH + W P + + + A+DN W
Sbjct: 261 GHQRGVIAMEWCPSDSSYLLTCAKDNRTICW 291
>ZFIN|ZDB-GENE-040426-2012 [details] [associations]
symbol:wdr24 "WD repeat domain 24" species:7955
"Danio rerio" [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2012 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 EMBL:BC045501 IPI:IPI00491202 RefSeq:NP_998228.1
UniGene:Dr.79568 ProteinModelPortal:Q7ZVL2 GeneID:406336
KEGG:dre:406336 InParanoid:Q7ZVL2 NextBio:20817956
ArrayExpress:Q7ZVL2 Uniprot:Q7ZVL2
Length = 779
Score = 178 (67.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/178 (28%), Positives = 81/178 (45%)
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
DV WH E L + + ++ W+L P +K Q H+ VN + F+P +L +
Sbjct: 73 DVMWHQMEENLLATAATNGAVVTWNLSRPCRNKQEQLFTEHKRTVNKVCFHPTEVNMLLS 132
Query: 292 GSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
GS D +K FDLRK ++ TF E V V ++ K+ A+ + +WD+ R D
Sbjct: 133 GSQDGFMKCFDLRK-KESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIRRPD 191
Query: 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED--WVISSVAEDNILQIWQMAEN 407
E +F HT + W+P ED W+ + D ++++W M+ N
Sbjct: 192 RY-----------ERMFT--AHTGPVFCCDWHP-EDRGWLATG-GRDKMVKVWDMSTN 234
Score = 142 (55.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 43/170 (25%), Positives = 79/170 (46%)
Query: 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS 245
W + +E L + + + + W+++ +NK Q+F H+ V V +H + S
Sbjct: 76 WHQMEENLLATAATNGAVVTWNLSRPCRNKQ---EQLFTEHKRTVNKVCFHPTEVNMLLS 132
Query: 246 VGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILATGSTDKTVKLFDLR 304
D ++ +DLR K S + QSE V + F+ + + A + V+L+D+R
Sbjct: 133 GSQDGFMKCFDLR----KKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIR 188
Query: 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS--RIDE 352
+ F +H VF W+P++ LA+ + + VWD+S R+ E
Sbjct: 189 RPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMSTNRVKE 238
Score = 119 (46.9 bits), Expect = 0.00084, P = 0.00084
Identities = 57/240 (23%), Positives = 95/240 (39%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H VN+ + P ++ + + + FD K S G S +R S + Y
Sbjct: 113 HKRTVNKVCFHPTEVNMLLSGSQDGFMKCFDLRKKESVSTFSGQ-SESVRDVQFSMKDYF 171
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+ F+ G+ + LWDI + + ++F H G V WH
Sbjct: 172 TFAASFENGN---------VQLWDIRRPDRYE-----RMFTAHTGPVFCCDWHPEDRGWL 217
Query: 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS--TDKTVKLF 301
+ G D+ + +WD+ T V K + V S V + + P + LAT S D + ++
Sbjct: 218 ATGGRDKMVKVWDMSTNRV-KEIYCVQTFAS-VARVKWRPERRYHLATCSMMVDHNIYVW 275
Query: 302 DLRKISTALHTFDSHKEEVFQVGWNPKNET-ILASCCLGRRL---MVWDLSRIDEEQTPE 357
D+R+ TF+ HK+ + W +++ L S L M D SR + PE
Sbjct: 276 DVRRPFIPFATFEEHKDVTTGIVWRHQHDPYFLLSGSKDSTLYQHMFKDASRPVDRANPE 335
>UNIPROTKB|F1MJS7 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
EMBL:DAAA02057282 IPI:IPI00713947 UniGene:Bt.720
ProteinModelPortal:F1MJS7 Ensembl:ENSBTAT00000025300 Uniprot:F1MJS7
Length = 790
Score = 178 (67.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
DV WH E L + + ++ W+L PS +K Q H+ VN + F+P +L +
Sbjct: 79 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 292 GSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
GS D +K FDLR+ ++ TF E V V ++ ++ AS + +WD+ R D
Sbjct: 139 GSQDGFMKCFDLRR-KDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPD 197
Query: 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED--WVISSVAEDNILQIWQMA 405
+ A +GP +F W+P ED W+ + D ++++W MA
Sbjct: 198 RCERMFTAHNGP---VFC----------CDWHP-EDRGWLATG-GRDKMVKVWDMA 238
Score = 155 (59.6 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 47/163 (28%), Positives = 79/163 (48%)
Query: 191 EGH-LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
E H LLSGS D + +D+ + K +++ F V DV + +R + F S ++
Sbjct: 132 EAHVLLSGSQDGFMKCFDL----RRK--DSVSTFSGQSESVRDVQFSIRDYFTFASTFEN 185
Query: 250 QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI-ST 308
+ +WD+R P + + AH V C ++P + LATG DK VK++D+ +
Sbjct: 186 GNVQLWDIRRPDRCE--RMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMATHRAK 243
Query: 309 ALHTFDSHKEEVFQVGWNPKNETILASCCL--GRRLMVWDLSR 349
+H + V +V W P+ LA+C + + VWD+ R
Sbjct: 244 EVHCVQTIAS-VARVKWRPECRHHLATCSMMVDHNVYVWDVRR 285
Score = 139 (54.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 40/164 (24%), Positives = 76/164 (46%)
Query: 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS 245
W + E L + + + + W++ +NK Q+F H+ V V +H ++ S
Sbjct: 82 WHQMDENLLATAATNGVVVTWNLGRPSRNKQ---DQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 246 VGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILATGSTDKTVKLFDLR 304
D ++ +DLR K S + QSE V + F+ + + A+ + V+L+D+R
Sbjct: 139 GSQDGFMKCFDLRR----KDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIR 194
Query: 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
+ F +H VF W+P++ LA+ + + VWD++
Sbjct: 195 RPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMA 238
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 176 (67.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W++ K ++LS D +WD + EA Q F H DV W
Sbjct: 328 HKGPIFALKWNR-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW- 379
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
++ F S D + + L +PV++ H +EVN + ++P + +LA+ S D
Sbjct: 380 -QNNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDM 434
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP + +LAS + +WD+
Sbjct: 435 TLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIE 493
Query: 349 R 349
R
Sbjct: 494 R 494
Score = 156 (60.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 73/291 (25%), Positives = 117/291 (40%)
Query: 136 QNPFLIATKTVSAEVY-VFDYSKHPSKPPLDGACS-PDLR---LRGHSTEGYGLSWSKFK 190
QNP TV+ E + H +DG P + LRGH +E + +W+
Sbjct: 185 QNPSKNREATVNGEENRAHSVNNHAKPMEIDGEVEIPSSKATVLRGHESEVFICAWNPVS 244
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-----DVA---WHLRHEYL 242
+ L SGS D+ +W++N S + + + EG + DV W+ L
Sbjct: 245 D-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLL 303
Query: 243 F-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLF 301
GS D + IW T ++ H+ + L +N +IL+ G DKT ++
Sbjct: 304 ATGSY--DGFARIW---TED-GNLASTLGQHKGPIFALKWNRKGNYILSAG-VDKTTIIW 356
Query: 302 DLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAED 361
D A F H V W +N T ASC + V L D
Sbjct: 357 DAHT-GEAKQQFPFHSAPALDVDW--QNNTTFASCSTDMCIHVCRLGC-----------D 402
Query: 362 GPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI-YHD 411
P + GHT++++ W+P +++S ++D L+IW M + + HD
Sbjct: 403 RPVKTF---QGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQEVCIHD 449
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 43/183 (23%), Positives = 77/183 (42%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + Y+ S G D+ +IWD T Q H + L + N
Sbjct: 328 HKGPIFALKWNRKGNYIL-SAGVDKTTIIWDAHTGEAK---QQFPFHSAPA--LDVDWQN 381
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + TF H EV + W+P +LASC L +W
Sbjct: 382 NTTFASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIW 439
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ +E D + E+ I T + NP + +++S + D+ +++W +
Sbjct: 440 SMK---QEVCIHDLQAHNKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDIE 493
Query: 406 ENI 408
+
Sbjct: 494 RGV 496
Score = 129 (50.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 44/187 (23%), Positives = 82/187 (43%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEA--MQI 222
G P +GH+ E + W G LL+ SDD + +W + L+A +I
Sbjct: 400 GCDRPVKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEI 457
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD+ + ++ HQ V +AF+
Sbjct: 458 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCT---HTLTKHQEPVYSVAFS 514
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P ++ LA+GS DK V +++ + +H++ +F+V WN + + + AS G +
Sbjct: 515 PDGKY-LASGSFDKCVHIWNTQS-GNLVHSYRG-TGGIFEVCWNARGDKVGASASDGS-V 570
Query: 343 MVWDLSR 349
V DL +
Sbjct: 571 CVLDLRK 577
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 171 (65.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 61/264 (23%), Positives = 121/264 (45%)
Query: 152 VFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAA 211
V++ + +P+ + +CS D +R SW+ K GH L GS D C+W+ N A
Sbjct: 23 VWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWT-CKLGHRL-GSFDGNTCVWE-NFA 79
Query: 212 PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK--PVQSV 269
+ E++ + + HE V+ V+W+ L + G D+ + IW+++ + + +
Sbjct: 80 TDS---ESVSVLRGHESEVKSVSWNASGS-LLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 270 VAHQSEVNCLAFNPFNEWILATGSTDKTVKLF-------DLRKISTALHTFDSHKEEVFQ 322
H +V + ++P + +L + S D T+K++ D + T + H V+
Sbjct: 136 TGHSEDVKMVLWHPTMD-VLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWS 194
Query: 323 VGWNPKNETILASCCLGRRLMVW--DLSRIDEEQTPEDAEDGPP--ELLFIHGGHTSKIS 378
+ +N + ++ +C + +W D+SR+ + E P + + G H I
Sbjct: 195 ISFNAAGDKMV-TCSDDLAVKIWKTDISRM------QSGEGYVPWTHVCTLSGFHDRTIY 247
Query: 379 DFSWNPCEDWVISSVAEDNILQIW 402
W+ D VI+S A D+ +Q++
Sbjct: 248 SVHWS--RDGVIASGAGDDTIQLF 269
Score = 141 (54.7 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 59/252 (23%), Positives = 112/252 (44%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSD-DAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
LRGH +E +SW+ G LL+ D + +W+I ++ + + + H V+
Sbjct: 88 LRGHESEVKSVSWNA--SGSLLATCGRDKSVWIWEIQPE-EDDEFDTIAVLTGHSEDVKM 144
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSVV----AHQSEVNCLAFNPFNEW 287
V WH + LF S D + IW VQ++ H S V ++FN +
Sbjct: 145 VLWHPTMDVLF-SCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDK 203
Query: 288 ILATGSTDKTVKLF--DLRKISTA------LH--TFDS-HKEEVFQVGWNPKNETILASC 336
++ T S D VK++ D+ ++ + H T H ++ V W+ + ++AS
Sbjct: 204 MV-TCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWS--RDGVIASG 260
Query: 337 CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI--HGGHTSKISDFSWNPC-EDWVISSV 393
+ ++ +D + D+ DGP L + H ++ W P E +++S
Sbjct: 261 AGDDTIQLF----VDSDS---DSVDGPSYKLLVKKEKAHEMDVNSVQWAPDKESRLLASA 313
Query: 394 AEDNILQIWQMA 405
++D +++IW++A
Sbjct: 314 SDDKMVKIWKLA 325
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 47/181 (25%), Positives = 84/181 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K ++LS D +WD + EA Q F H DV W
Sbjct: 275 HKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW- 326
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
++ F S G D + + L PV++ H +EVN + ++P + +LA+ S D
Sbjct: 327 -QNNTTFASCGTDMCIHVCRL---GCDLPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDM 381
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP + +LAS + +WD+
Sbjct: 382 TLKIWSMKQ-DACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE 440
Query: 349 R 349
+
Sbjct: 441 Q 441
Score = 153 (58.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 76/292 (26%), Positives = 124/292 (42%)
Query: 136 QNPFLIATKTVSAEVY-VFDYSKHPSKP---PLDGACSPDLR--LRGHSTEGYGLSWSKF 189
QNP I TV+ E + + H SKP D P+ LRGH +E + +W+
Sbjct: 132 QNPPKIREATVNGEENGAHEINNH-SKPMEIDRDVEIPPNKATVLRGHESEVFICAWNPV 190
Query: 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-----DVA---WHLRHEY 241
+ L SGS D+ +W++N S + + + EG + DV W+
Sbjct: 191 SD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVPSNKDVTSLDWNSDGTL 249
Query: 242 L-FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L GS D + IW T + ++ H+ + L +N +IL+ G DKT +
Sbjct: 250 LAMGSY--DGFARIW---TEN-GNLASTLGQHKGPIFALKWNKKGNYILSAG-VDKTTII 302
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
+D A F H V W +N T ASC G + + + R+ +
Sbjct: 303 WDAHT-GEAKQQFPFHSAPALDVDW--QNNTTFASC--GTDMCI-HVCRLGCDL------ 350
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI-YHD 411
P F GHT++++ W+P +++S ++D L+IW M ++ HD
Sbjct: 351 ---PVKTF--QGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHD 396
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/187 (22%), Positives = 84/187 (44%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDI--NAAPKNKSLEAMQI 222
G P +GH+ E + W G LL+ SDD + +W + +A + + +I
Sbjct: 347 GCDLPVKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEI 404
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD+ + ++ HQ V +AF+
Sbjct: 405 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCT---HTLTKHQEPVYSIAFS 461
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P ++ LA+GS DK V +++ + + +H++ +F+V WN + + + AS G +
Sbjct: 462 PDGKY-LASGSFDKCVHIWNTQS-GSLVHSYQG-TGGIFEVCWNARGDKVGASASDGS-V 517
Query: 343 MVWDLSR 349
V DL +
Sbjct: 518 CVLDLRK 524
Score = 127 (49.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 41/183 (22%), Positives = 76/183 (41%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + Y+ S G D+ +IWD T Q H + L + N
Sbjct: 275 HKGPIFALKWNKKGNYIL-SAGVDKTTIIWDAHTGEAK---QQFPFHSAPA--LDVDWQN 328
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ TD + + L + TF H EV + W+P +LASC L +W
Sbjct: 329 NTTFASCGTDMCIHVCRLG-CDLPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIW 386
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T + NP +++S + D+ +++W +
Sbjct: 387 SMK---QDACVHDLQAHSKEIYTIKWSPTGPATS---NPNSSIMLASASFDSTVRLWDVE 440
Query: 406 ENI 408
+ +
Sbjct: 441 QGV 443
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 53/216 (24%), Positives = 104/216 (48%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSL-EAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQY 251
++S S D ++ +W+IN + + A + H + DV+ + + LF G D
Sbjct: 38 IVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS--ISSDGLFALSGSWDHS 95
Query: 252 LLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALH 311
+ +WDL S+ + ++S + H S+V ++F+P N I++ S DKT+KL++
Sbjct: 96 VRLWDL---SLGETIRSFIGHTSDVFSVSFSPDNRQIVSA-SRDKTIKLWNTLAQCKYTI 151
Query: 312 TFDSHKEEVFQVGWNPK-NETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
T H + + V ++P N+ I+ SC + + VW+L D + E
Sbjct: 152 TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE------------- 198
Query: 371 GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
GHT ++ + +P + + +S +D + ++W + E
Sbjct: 199 -GHTGVLNTVTISP-DGSLCASGGKDGVAKLWDVKE 232
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 53/216 (24%), Positives = 104/216 (48%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSL-EAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQY 251
++S S D ++ +W+IN + + A + H + DV+ + + LF G D
Sbjct: 38 IVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS--ISSDGLFALSGSWDHS 95
Query: 252 LLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALH 311
+ +WDL S+ + ++S + H S+V ++F+P N I++ S DKT+KL++
Sbjct: 96 VRLWDL---SLGETIRSFIGHTSDVFSVSFSPDNRQIVSA-SRDKTIKLWNTLAQCKYTI 151
Query: 312 TFDSHKEEVFQVGWNPK-NETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
T H + + V ++P N+ I+ SC + + VW+L D + E
Sbjct: 152 TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE------------- 198
Query: 371 GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
GHT ++ + +P + + +S +D + ++W + E
Sbjct: 199 -GHTGVLNTVTISP-DGSLCASGGKDGVAKLWDVKE 232
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 174 (66.3 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 46/181 (25%), Positives = 81/181 (44%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K +LS D +WD + EA Q+F H DV W
Sbjct: 265 HKGPIFALKWNK-KGNFILSAGVDKTTIIWDAHTG------EAKQLFPFHSAPALDVDWQ 317
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
+ F S D + + L +P+++ H +EVN + ++P +LA+ S D
Sbjct: 318 SNNT--FASCSTDMCIHVCKL---GQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDM 371
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP +LAS + +WD+
Sbjct: 372 TLKIWSMKQ-DNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVD 430
Query: 349 R 349
R
Sbjct: 431 R 431
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 61/248 (24%), Positives = 106/248 (42%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-- 231
LRGH +E + +W+ + L SGS D+ +W+++ + S + + + EG +
Sbjct: 165 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 232 ---DVA---WHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
DV W+ L GS D + IW + +++ + H+ + L +N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSY--DGFARIWT-KDGNLASTLGQ---HKGPIFALKWNKK 277
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
+IL+ G DKT ++D A F H V W N ASC + V
Sbjct: 278 GNFILSAG-VDKTTIIWDAHT-GEAKQLFPFHSAPALDVDWQSNNT--FASCSTDMCIHV 333
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
L +D P + GHT++++ W+P + +++S ++D L+IW M
Sbjct: 334 CKLG-----------QDRPIKTF---QGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSM 378
Query: 405 AE-NIYHD 411
+ N HD
Sbjct: 379 KQDNCVHD 386
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 44/185 (23%), Positives = 82/185 (44%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK--PVQSVVAHQSEVNCLAFNP 283
H+G + + W+ + ++ S G D+ +IWD T + P S A +V+ + N
Sbjct: 265 HKGPIFALKWNKKGNFIL-SAGVDKTTIIWDAHTGEAKQLFPFHSAPA--LDVDWQSNNT 321
Query: 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM 343
F A+ STD + + L + + TF H EV + W+P +LASC L
Sbjct: 322 F-----ASCSTDMCIHVCKLGQ-DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLK 374
Query: 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
+W + ++ D + E+ I T + NP + +++S + D+ +++W
Sbjct: 375 IWSMK---QDNCVHDLQAHNKEIYTIKWSPTGPGTS---NPNANLMLASASFDSTVRLWD 428
Query: 404 MAENI 408
+ I
Sbjct: 429 VDRGI 433
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279
++ F+ H V + W L S DD L IW ++ + V + AH E+ +
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC---VHDLQAHNKEIYTI 397
Query: 280 AF--------NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331
+ NP +LA+ S D TV+L+D+ + +HT H+E V+ V ++P
Sbjct: 398 KWSPTGPGTSNPNANLMLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSPDGR- 455
Query: 332 ILASCCLGRRLMVWD 346
LAS + + +W+
Sbjct: 456 YLASGSFDKCVHIWN 470
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 175 (66.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 61/197 (30%), Positives = 99/197 (50%)
Query: 155 YSKHPSKP-PLDGACSPDLR---LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA 210
YS + P PL G+ + L+ L GH+ +G+S S KE +LS S+D LW
Sbjct: 376 YSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSISPQKE-FILSCSEDGFTRLW---- 430
Query: 211 APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270
+ KS + + H + DV + Y F + DQ +WD+ + P++ V
Sbjct: 431 SKDTKS--TIVKYAGHNAPIWDVQFS-PFGYYFATASHDQTARLWDVEHAA---PLRVFV 484
Query: 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNE 330
HQ++V+C++F+P N LATGS+D T +++D+R T + F++H V + +
Sbjct: 485 GHQNDVDCVSFHP-NAAYLATGSSDHTTRMWDVRTGGT-VRVFNAHHSPVSALCMSADGL 542
Query: 331 TILASCCLGRRLMVWDL 347
+ LAS + VWDL
Sbjct: 543 S-LASADESGIIKVWDL 558
>DICTYBASE|DDB_G0267382 [details] [associations]
symbol:corA "coronin" species:44689 "Dictyostelium
discoideum" [GO:0001891 "phagocytic cup" evidence=IBA;IDA]
[GO:0006909 "phagocytosis" evidence=IEP] [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0031982 "vesicle" evidence=IDA]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0009617
"response to bacterium" evidence=IEP] [GO:0006972 "hyperosmotic
response" evidence=IEP] [GO:0005885 "Arp2/3 protein complex"
evidence=ISS] [GO:0051126 "negative regulation of actin nucleation"
evidence=ISS] [GO:0007015 "actin filament organization"
evidence=ISS] [GO:0006897 "endocytosis" evidence=TAS] [GO:0051707
"response to other organism" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0042995 "cell projection" evidence=IDA]
[GO:0051286 "cell tip" evidence=IDA] [GO:0043327 "chemotaxis to
cAMP" evidence=IMP] [GO:0006928 "cellular component movement"
evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0030864 "cortical actin
cytoskeleton" evidence=IBA] [GO:0030835 "negative regulation of
actin filament depolymerization" evidence=IBA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0060187 "cell pole" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267382 GO:GO:0009986
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0009617 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006909 GO:GO:0051015
EMBL:AAFI02000003 GO:GO:0006928 GO:GO:0006972 GO:GO:0000910
GO:GO:0042995 GO:GO:0001891 GO:GO:0030864 GO:GO:0051126
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:X61480 PIR:S18663 RefSeq:XP_647343.1 ProteinModelPortal:P27133
STRING:P27133 EnsemblProtists:DDB0191115 GeneID:8616153
KEGG:ddi:DDB_G0267382 OMA:PVLDIKW ProtClustDB:CLSZ2431531
Uniprot:P27133
Length = 445
Score = 172 (65.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 39/132 (29%), Positives = 70/132 (53%)
Query: 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR----TPSVSKPVQSVVAHQS 274
++ +F H+ V D+A+H +E L GSV +D + IW + T S+S P+Q++ H+
Sbjct: 71 SVPLFNGHKSAVLDIAFHPFNENLVGSVSEDCNICIWGIPEGGLTDSISTPLQTLSGHKR 130
Query: 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILA 334
+V ++FNP + + T S D VK +D+ + L T + H + + WN I+
Sbjct: 131 KVGTISFNPVADNVAVTSSGDFLVKTWDVEQ-GKNLTTVEGHSDMITSCEWNHNGSQIVT 189
Query: 335 SCCLGRRLMVWD 346
+C ++ V+D
Sbjct: 190 TC-KDKKARVFD 200
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 174 (66.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 57/176 (32%), Positives = 85/176 (48%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
LRGH Y + G LLS S+D I WD+ S +++ H V DV
Sbjct: 338 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLG------SFTNTVLYQGHAYPVWDV 390
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDL-RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
Y F S D+ +W RT P++ H ++V+C+ F+P N LATG
Sbjct: 391 DISPYSLY-FASGSHDRTARLWSFDRT----YPLRIYAGHLADVDCVKFHP-NSNYLATG 444
Query: 293 STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
STDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +WDL+
Sbjct: 445 STDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLA 498
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 38/128 (29%), Positives = 68/128 (53%)
Query: 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L +GS D + LW +A + S+ ++F H G V +A+ +YL S G+DQ L
Sbjct: 440 YLATGSTDKTVRLW---SAQQGNSV---RLFTGHRGPVLSLAFSPNGKYL-ASAGEDQRL 492
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT 312
+WDL + ++ K ++ H + L F+P + ++A+ S D +V+++D+R + T
Sbjct: 493 KLWDLASGTLFKELRG---HTDNITSLTFSPDSS-LIASASMDNSVRVWDIRNTHCSAPT 548
Query: 313 FDSHKEEV 320
S E V
Sbjct: 549 DGSSSELV 556
Score = 122 (48.0 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
N LATGSTDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKL 494
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIH-GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
WDL+ G LF GHT I+ +++P + +I+S + DN +++W
Sbjct: 495 WDLA------------SGT---LFKELRGHTDNITSLTFSP-DSSLIASASMDNSVRVWD 538
Query: 404 M 404
+
Sbjct: 539 I 539
Score = 38 (18.4 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226
L +G D++ I LW + + + + ++H
Sbjct: 283 LAAGFDNSCIKLWSLRSKKLKPEPHRVDVSRIH 315
>UNIPROTKB|Q13216 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IMP;TAS] [GO:0006979 "response to oxidative stress"
evidence=IDA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009411 "response to UV"
evidence=IMP;IDA] [GO:0045739 "positive regulation of DNA repair"
evidence=IMP] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;IMP;TAS] [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000109 "nucleotide-excision
repair complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0005654
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471123 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464 PDB:4A11
PDBsum:4A11 GO:GO:0000109 Orphanet:90321 Orphanet:90322
Orphanet:90324 Orphanet:178338 CTD:1161 HOVERGEN:HBG005409
OMA:TMLRGHY EMBL:U28413 EMBL:CR536563 EMBL:BT020021 EMBL:AY213194
EMBL:AK314511 EMBL:BC009793 IPI:IPI00012284 IPI:IPI00386696
PIR:A57090 RefSeq:NP_000073.1 UniGene:Hs.435237
ProteinModelPortal:Q13216 SMR:Q13216 DIP:DIP-291N IntAct:Q13216
MINT:MINT-1417899 STRING:Q13216 PhosphoSite:Q13216 DMDM:3121917
PRIDE:Q13216 DNASU:1161 Ensembl:ENST00000265038 GeneID:1161
KEGG:hsa:1161 UCSC:uc003jsl.3 UCSC:uc003jsn.3 GeneCards:GC05M060169
H-InvDB:HIX0004887 HGNC:HGNC:3439 MIM:216400 MIM:609412 MIM:614621
neXtProt:NX_Q13216 PharmGKB:PA27853 InParanoid:Q13216
OrthoDB:EOG4SN1NR PhylomeDB:Q13216 GenomeRNAi:1161 NextBio:4822
ArrayExpress:Q13216 Bgee:Q13216 CleanEx:HS_ERCC8
Genevestigator:Q13216 GermOnline:ENSG00000049167 Uniprot:Q13216
Length = 396
Score = 170 (64.9 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 56/226 (24%), Positives = 99/226 (43%)
Query: 191 EG-HLLSGSDDAQICLWDINAAPKNKSLEAMQIFK-------VHEGVVEDVAWHLRHEYL 242
EG ++LSG D I L+D+ + + + VH VE V W+ +
Sbjct: 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114
Query: 243 FGSVGDDQYLLIWD---LRTPSVSKPVQSVVAHQ-SEVNCLAFNPFNEWILATGSTDKTV 298
F S D+ L +WD L+T V ++V +H S V+ ++A G+ V
Sbjct: 115 FTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVST------KHCLVAVGTRGPKV 168
Query: 299 KLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358
+L DL+ S + H H++E+ V W+P+ + ILA+ R+ +WD+ R D
Sbjct: 169 QLCDLKSGSCS-HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLD 227
Query: 359 AEDGPPELLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+G + H K++ + + + +V DN +++W
Sbjct: 228 QHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLW 272
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 55/215 (25%), Positives = 95/215 (44%)
Query: 110 GCANGKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSAEV-YVFDYSKHPSKPPLDGA 167
G K + +++I H G +N P + ++++ + V Y + S S
Sbjct: 29 GLELNKDRDVERI-HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAV 87
Query: 168 CS-----PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI 222
CS PD+ +S E + W G S S D + +WD N +L+ +
Sbjct: 88 CSIGRDHPDVHR--YSVET--VQWYPHDTGMFTSSSFDKTLKVWDTN------TLQTADV 137
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281
F E V + ++ +VG + + DL++ S S +Q H+ E+ +++
Sbjct: 138 FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG---HRQEILAVSW 194
Query: 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
+P ++ILAT S D VKL+D+R+ S L T D H
Sbjct: 195 SPRYDYILATASADSRVKLWDVRRASGCLITLDQH 229
>UNIPROTKB|F1SKV7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:CU570846
EMBL:FP067346 RefSeq:XP_003134037.3 Ensembl:ENSSSCT00000018442
GeneID:100524405 KEGG:ssc:100524405 Uniprot:F1SKV7
Length = 396
Score = 170 (64.9 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 56/225 (24%), Positives = 100/225 (44%)
Query: 191 EG-HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-------HEGVVEDVAWHLRHEYL 242
EG ++LSG D I L+D+ A + + V H+ VE V W+ +
Sbjct: 55 EGRYMLSGGSDGVIVLYDLENASRQPYYTCKAVCSVGRNHPDVHKYSVETVQWYPHDTGM 114
Query: 243 FGSVGDDQYLLIWD---LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVK 299
F S D+ L +WD L+T V ++V +H ++ +A ++A G+ V+
Sbjct: 115 FTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHH--MSPVATK---HCLVAVGTKGPKVQ 169
Query: 300 LFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359
L DL+ S + H H++E+ V W+P+ E ILA+ + +WD+ R D
Sbjct: 170 LCDLKSGSCS-HILQGHRQEILAVSWSPRYEYILATASADSKAKLWDVRRASGCLITLDQ 228
Query: 360 EDGPPELLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+G + H K++ + + + +V DN +++W
Sbjct: 229 HNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLW 272
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+ W G S S D + +WD N +L+ +F E V + ++
Sbjct: 105 VQWYPHDTGMFTSSSFDKTLKVWDTN------TLQTADVFNFEETVYSHHMSPVATKHCL 158
Query: 244 GSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+VG + + DL++ S S +Q H+ E+ ++++P E+ILAT S D KL+D
Sbjct: 159 VAVGTKGPKVQLCDLKSGSCSHILQG---HRQEILAVSWSPRYEYILATASADSKAKLWD 215
Query: 303 LRKISTALHTFDSH 316
+R+ S L T D H
Sbjct: 216 VRRASGCLITLDQH 229
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 181 (68.8 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 60/237 (25%), Positives = 113/237 (47%)
Query: 120 QQINHDGEVNRARYMP---QN-PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175
Q +N+ G N + P +N FLIAT + V +++ + SK S +
Sbjct: 63 QSLNYTG--NDCCWHPSLLENYRFLIATAATNGAVVIWNTVREGSK-------SVERVFT 113
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVA 234
HS L+W K +L+GS D + +WDI S A +I F + DV
Sbjct: 114 DHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIR-----DSANASKITFSPKSESIRDVQ 168
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
++ F + D+ + +WD+R P+++ V+ + +HQ V + ++P + I+A+G
Sbjct: 169 FNPSQANQFAAAFDNGTIQLWDIRKPTIA--VEKITSHQGLVLTIDWHPEEKNIIASGGR 226
Query: 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC--LGRRLMVWDLSR 349
D+ ++++D +L+ S V ++ W P N+ +ASC + ++ +WD+ +
Sbjct: 227 DRAIRVWDFSN-GKSLNNV-STISSVSRIKWRPGNKWHIASCSSIVDFQIHIWDVKK 281
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 51/214 (23%), Positives = 94/214 (43%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
+ + + + + +W+ +KS+E ++F H V +AWH + D L
Sbjct: 86 IATAATNGAVVIWN-TVREGSKSVE--RVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLR 142
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
+WD+R + + + +S + + FNP A + T++L+D+RK + A+
Sbjct: 143 MWDIRDSANASKITFSPKSES-IRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKI 201
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
SH+ V + W+P+ + I+AS R + VWD S +G ++
Sbjct: 202 TSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFS------------NGKS----LNNVS 245
Query: 374 T-SKISDFSWNPCEDWVISSVAE--DNILQIWQM 404
T S +S W P W I+S + D + IW +
Sbjct: 246 TISSVSRIKWRPGNKWHIASCSSIVDFQIHIWDV 279
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/180 (25%), Positives = 78/180 (43%)
Query: 232 DVAWHL----RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCLAFNPFNE 286
D WH + +L + + ++IW+ SK V+ V H VN LA++P
Sbjct: 71 DCCWHPSLLENYRFLIATAATNGAVVIWNTVREG-SKSVERVFTDHSRAVNKLAWHPEKL 129
Query: 287 WILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
+ TGS D T++++D+R + A TF E + V +NP A+ + +W
Sbjct: 130 DCILTGSQDNTLRMWDIRDSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLW 189
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
D+ + P A E + H G I W+P E +I+S D +++W +
Sbjct: 190 DIRK------PTIAV----EKITSHQGLVLTID---WHPEEKNIIASGGRDRAIRVWDFS 236
Score = 137 (53.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 40/148 (27%), Positives = 74/148 (50%)
Query: 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258
D+ I LWDI K A++ H+G+V + WH + + S G D+ + +WD
Sbjct: 182 DNGTIQLWDIR-----KPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDF- 235
Query: 259 TPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST--DKTVKLFDLRKISTALHTFDSH 316
S K + +V + S V+ + + P N+W +A+ S+ D + ++D++K L +F H
Sbjct: 236 --SNGKSLNNV-STISSVSRIKWRPGNKWHIASCSSIVDFQIHIWDVKKPYIPLFSFTDH 292
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMV 344
++ + W K+ + L SC L++
Sbjct: 293 RDVPTGLIW--KSPSSLISCSKDSHLLL 318
Score = 41 (19.5 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 367 LFIHGGHTSKISDFSWNP-CE--DWVISSVAEDNILQIWQMAENIYHDEDDL 415
LF H + S+N C+ +V SV + +I +W + + Y + D++
Sbjct: 412 LFEHFAKNYRFRGESFNQLCDHNQFVSQSVNQHHISTMWSLLKLHYSNLDEI 463
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 168 (64.2 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 54/229 (23%), Positives = 102/229 (44%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
GH +SWS +L S S DA C+W K + E + + HE V+ VAW
Sbjct: 59 GHQRTVRKVSWSPCGN-YLASASFDATTCIW----MKKKEEFECITTLEGHENEVKSVAW 113
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
L + D+ + +W++ + V + +H +V + ++P N+ +LA+ S D
Sbjct: 114 APSGS-LLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHP-NQELLASASYD 171
Query: 296 KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354
+VKL+ + T + H V+ + ++ E LA+C + + +W E+
Sbjct: 172 DSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQ-LATCSDDKTVRIWRQLGTGEQG 230
Query: 355 TPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
+ D + + G HT + D +WN I++ D+ ++I++
Sbjct: 231 SKSDPNWKC--VCTLTGYHTRTVYDVNWNHLTG-AIATACGDDAVRIFE 276
Score = 161 (61.7 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 66/246 (26%), Positives = 103/246 (41%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GH E ++W+ G LL+ S D + +W+++ + + E + + H V+
Sbjct: 101 LEGHENEVKSVAWAP--SGSLLATCSRDKSVWVWEVD---EEEEYECVSVLNSHTQDVKH 155
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
V WH E L + DD L + V ++ H S V LAF+ E LAT
Sbjct: 156 VVWHPNQELLASASYDDSVKLYREEEDDWVC--CATLEGHTSTVWSLAFDQTGEQ-LATC 212
Query: 293 STDKTVKLFDLRKISTALHTFDS-------------HKEEVFQVGWNPKNETILASCCLG 339
S DKTV+++ R++ T S H V+ V WN I +C G
Sbjct: 213 SDDKTVRIW--RQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATAC--G 268
Query: 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAEDN 397
D RI EE D P L H HT ++ +W+P E +++S ++D
Sbjct: 269 D-----DAVRIFEEDPGSDPLQ-PTFSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDG 322
Query: 398 ILQIWQ 403
+ W+
Sbjct: 323 EMAFWR 328
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 44/177 (24%), Positives = 86/177 (48%)
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPS-VSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
+AW+ L S G D+ + IW + V K V HQ V ++++P + LA+
Sbjct: 22 LAWNPSGT-LLASCGGDRTIRIWGKDGDNWVCKSVLGE-GHQRTVRKVSWSPCGNY-LAS 78
Query: 292 GSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
S D T ++ +K + T + H+ EV V W P ++LA+C + + VW+ +
Sbjct: 79 ASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSG-SLLATCSRDKSVWVWE---V 134
Query: 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
DEE+ E + + HT + W+P ++ +++S + D+ +++++ E+
Sbjct: 135 DEEEEYE--------CVSVLNSHTQDVKHVVWHPNQE-LLASASYDDSVKLYREEED 182
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 168 (64.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 55/232 (23%), Positives = 103/232 (44%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
GH ++WS +L S S DA C+W N E + + HE V+ VAW
Sbjct: 59 GHQRTVRKVAWSPCGN-YLASASFDATTCIWKKN----EDDFECVTTLEGHENEVKSVAW 113
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
L + D+ + +W++ + V + +H +V + ++P E +LA+ S D
Sbjct: 114 APSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE-LLASASYD 171
Query: 296 KTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354
TVKL+ + T + H+ V+ + ++P + LASC R + +W EQ
Sbjct: 172 DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRIWRQYLPGNEQ 230
Query: 355 --TPEDAEDGPPELLFIHGGHTSKISDFSWNPCE-DWVISSVAEDNILQIWQ 403
+E + + G H+ I D +W C+ +++ D+ +++++
Sbjct: 231 GVACSGSEASWKCVCTLSGFHSRTIYDVAW--CQLTGTLATACGDDAIRVFE 280
Score = 151 (58.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 63/255 (24%), Positives = 111/255 (43%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GH E ++W+ G+LL+ S D + +W+++ + E + + H V+
Sbjct: 101 LEGHENEVKSVAWAP--SGNLLATCSRDKSVWVWEVD---EEDEYECVSVLNSHTQDVKH 155
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
V WH E L + DD L + V ++ H+S V LAF+P + LA+
Sbjct: 156 VVWHPSQELLASASYDDTVKLYREEEDDWVC--CATLEGHESTVWSLAFDPSGQR-LASC 212
Query: 293 STDKTVKLF------DLRKISTA--------LHTFDS-HKEEVFQVGWNPKNETILASCC 337
S D+TV+++ + + ++ + + T H ++ V W T+ +C
Sbjct: 213 SDDRTVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLATAC- 271
Query: 338 LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAE 395
G D R+ EE D + P L H H+ ++ +WNP E +++S ++
Sbjct: 272 -GD-----DAIRVFEEDPGSDPQQ-PTFSLTAHVPQAHSQDVNCVAWNPKERGLLASCSD 324
Query: 396 DNILQIW--QMAENI 408
D L W Q +E I
Sbjct: 325 DGELAFWKYQPSEGI 339
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 48/190 (25%), Positives = 88/190 (46%)
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPS-VSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
+AW+ L S G D+ + IW S + K V HQ V +A++P + LA+
Sbjct: 22 LAWNPAGT-LLASCGGDRSVRIWGREGDSWICKSVLCE-GHQRTVRKVAWSPCGNY-LAS 78
Query: 292 GSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
S D T ++ + + T + H+ EV V W P +LA+C + + VW+ +
Sbjct: 79 ASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWE---V 134
Query: 351 DEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYH 410
DEE E + + HT + W+P ++ +++S + D+ +++++ E+ +
Sbjct: 135 DEEDEYE--------CVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWV 185
Query: 411 DEDDLPGDES 420
L G ES
Sbjct: 186 CCATLEGHES 195
>MGI|MGI:2446285 [details] [associations]
symbol:Wdr24 "WD repeat domain 24" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005777
"peroxisome" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2446285 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 GeneTree:ENSGT00650000093352
HOGENOM:HOG000234392 HOVERGEN:HBG080644 OMA:HALYDSR
OrthoDB:EOG48WC1D EMBL:BC037651 IPI:IPI00229321 RefSeq:NP_776102.1
UniGene:Mm.95512 ProteinModelPortal:Q8CFJ9 SMR:Q8CFJ9
PhosphoSite:Q8CFJ9 PaxDb:Q8CFJ9 PRIDE:Q8CFJ9
Ensembl:ENSMUST00000026833 GeneID:268933 KEGG:mmu:268933
UCSC:uc008bcd.2 InParanoid:Q8CFJ9 NextBio:392587 Bgee:Q8CFJ9
CleanEx:MM_WDR24 Genevestigator:Q8CFJ9
GermOnline:ENSMUSG00000025737 Uniprot:Q8CFJ9
Length = 790
Score = 174 (66.3 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 49/175 (28%), Positives = 81/175 (46%)
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
DV WH E L + + ++ W+L PS +K Q H+ VN + F+P +L +
Sbjct: 79 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 292 GSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
GS D +K FDLR+ ++ TF E V V ++ ++ AS + +WD+ R D
Sbjct: 139 GSQDGFMKCFDLRR-KDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPD 197
Query: 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED--WVISSVAEDNILQIWQM 404
+ A +GP +F W+P ED W+ + D ++++W M
Sbjct: 198 RCERMFTAHNGP---VFC----------CDWHP-EDRGWLATG-GRDKMVKVWDM 237
Score = 157 (60.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 47/163 (28%), Positives = 79/163 (48%)
Query: 191 EGH-LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
E H LLSGS D + +D+ + K +++ F V DV + +R + F S ++
Sbjct: 132 EAHVLLSGSQDGFMKCFDL----RRK--DSVSTFSGQSESVRDVQFSIRDYFTFASTFEN 185
Query: 250 QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI-ST 308
+ +WD+R P + + AH V C ++P + LATG DK VK++D+ +
Sbjct: 186 GNVQLWDIRRPDRCE--RMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAK 243
Query: 309 ALHTFDSHKEEVFQVGWNPKNETILASCCL--GRRLMVWDLSR 349
+H + V +V W P+ LA+C + + VWD+ R
Sbjct: 244 EIHCVQTIAS-VARVKWRPECRHHLATCSMMVDHNIYVWDVRR 285
Score = 139 (54.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 40/164 (24%), Positives = 76/164 (46%)
Query: 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS 245
W + E L + + + + W++ +NK Q+F H+ V V +H ++ S
Sbjct: 82 WHQMDENLLATAATNGVVVTWNLGRPSRNKQ---DQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 246 VGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILATGSTDKTVKLFDLR 304
D ++ +DLR K S + QSE V + F+ + + A+ + V+L+D+R
Sbjct: 139 GSQDGFMKCFDLRR----KDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIR 194
Query: 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
+ F +H VF W+P++ LA+ + + VWD++
Sbjct: 195 RPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMT 238
>UNIPROTKB|G3V8L0 [details] [associations]
symbol:Wdr24 "RCG32838" species:10116 "Rattus norvegicus"
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 EMBL:CH473948
GO:GO:0005053 PANTHER:PTHR22850:SF4 CTD:84219
GeneTree:ENSGT00650000093352 OMA:HALYDSR RefSeq:NP_001178013.1
UniGene:Rn.20330 ProteinModelPortal:G3V8L0
Ensembl:ENSRNOT00000026697 GeneID:360497 KEGG:rno:360497
RGD:1304803 NextBio:672978 Uniprot:G3V8L0
Length = 790
Score = 174 (66.3 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 49/175 (28%), Positives = 81/175 (46%)
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
DV WH E L + + ++ W+L PS +K Q H+ VN + F+P +L +
Sbjct: 79 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 292 GSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
GS D +K FDLR+ ++ TF E V V ++ ++ AS + +WD+ R D
Sbjct: 139 GSQDGFMKCFDLRR-KDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPD 197
Query: 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED--WVISSVAEDNILQIWQM 404
+ A +GP +F W+P ED W+ + D ++++W M
Sbjct: 198 RCERMFTAHNGP---VFC----------CDWHP-EDRGWLATG-GRDKMVKVWDM 237
Score = 157 (60.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 47/163 (28%), Positives = 79/163 (48%)
Query: 191 EGH-LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
E H LLSGS D + +D+ + K +++ F V DV + +R + F S ++
Sbjct: 132 EAHVLLSGSQDGFMKCFDL----RRK--DSVSTFSGQSESVRDVQFSIRDYFTFASTFEN 185
Query: 250 QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI-ST 308
+ +WD+R P + + AH V C ++P + LATG DK VK++D+ +
Sbjct: 186 GNVQLWDIRRPDRCE--RMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAK 243
Query: 309 ALHTFDSHKEEVFQVGWNPKNETILASCCL--GRRLMVWDLSR 349
+H + V +V W P+ LA+C + + VWD+ R
Sbjct: 244 EIHCVQTIAS-VARVKWRPECRHHLATCSMMVDHNIYVWDVRR 285
Score = 139 (54.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 40/164 (24%), Positives = 76/164 (46%)
Query: 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS 245
W + E L + + + + W++ +NK Q+F H+ V V +H ++ S
Sbjct: 82 WHQMDENLLATAATNGVVVTWNLGRPSRNKQ---DQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 246 VGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILATGSTDKTVKLFDLR 304
D ++ +DLR K S + QSE V + F+ + + A+ + V+L+D+R
Sbjct: 139 GSQDGFMKCFDLRR----KDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIR 194
Query: 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
+ F +H VF W+P++ LA+ + + VWD++
Sbjct: 195 RPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMT 238
>RGD|1598329 [details] [associations]
symbol:Sec31b "SEC31 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0044432 "endoplasmic reticulum part"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1598329 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K14005
GeneTree:ENSGT00390000003175 CTD:25956 OrthoDB:EOG470TGM
EMBL:AC103018 IPI:IPI00554203 RefSeq:NP_001129185.1
UniGene:Rn.45161 ProteinModelPortal:D4ADQ9
Ensembl:ENSRNOT00000035758 GeneID:309433 KEGG:rno:309433
UCSC:RGD:1598329 NextBio:660758 Uniprot:D4ADQ9
Length = 1179
Score = 176 (67.0 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN-----AAPKNKSLEAMQIFKVHEGVVE 231
H+ L ++ F+ L SG+ D++I +WD+N P +KS + K
Sbjct: 120 HTGAVRALDFNPFQGNLLASGASDSEIFIWDLNHLTVPMTPGSKSQNPPEDIKA------ 173
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNC--LAFNPFNEWIL 289
++W+ + +++ S ++WDLR ++P+ V H S +NC LA+NP L
Sbjct: 174 -LSWNRQVQHILSSAHPSGKAVVWDLRK---NEPIIKVSDHSSRMNCSGLAWNPDIATQL 229
Query: 290 ATGSTDK---TVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
S D ++L+DLR S+ L +SH + V W+ + +L S ++ W+
Sbjct: 230 VLCSEDDRLPVIQLWDLRFASSPLKVLESHSRGILSVSWSQADAELLLSSAKDNQIFCWN 289
Query: 347 LS 348
LS
Sbjct: 290 LS 291
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 58/235 (24%), Positives = 97/235 (41%)
Query: 182 YGLSWSKFKE--GHLLSGSDDAQICLWDIN--AAPKNKSLEAMQIFKVHEGVVEDVAWHL 237
+G S S E G + G D + L+++ +P + L A + + H G V + ++
Sbjct: 74 WGSSSSGLLENTGVIAGGGDSGMLTLYNVTHILSPGKEPLIAQK--QKHTGAVRALDFNP 131
Query: 238 RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILATGSTDK 296
L S D + IWDL +V S + E + L++N + IL++
Sbjct: 132 FQGNLLASGASDSEIFIWDLNHLTVPMTPGSKSQNPPEDIKALSWNRQVQHILSSAHPSG 191
Query: 297 TVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKNETILASCCLGRRLMV---WDLSRIDE 352
++DLRK + D S + + WNP T L C RL V WDL R
Sbjct: 192 KAVVWDLRKNEPIIKVSDHSSRMNCSGLAWNPDIATQLVLCSEDDRLPVIQLWDL-RF-- 248
Query: 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
P ++L H+ I SW+ + ++ S A+DN + W ++ +
Sbjct: 249 -------ASSPLKVL---ESHSRGILSVSWSQADAELLLSSAKDNQIFCWNLSSS 293
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 167 (63.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/225 (23%), Positives = 101/225 (44%)
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
++WS ++ S S D + +W I+ A +EA+ + H V+ VAW +L
Sbjct: 66 VTWSPCGT-YIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAW-CPSGHLI 123
Query: 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDL 303
+ G D+ + +W+ + V + H +V +A++P E +++T S D + ++
Sbjct: 124 ATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVST-SYDNKINVYRE 182
Query: 304 RKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362
T H V++ ++P + ILASC + +W + + +
Sbjct: 183 ELDDWTVFAQLSGHDSTVWKAEFSPSGD-ILASCSDDLCVKLWSWEGVCGKSSSWMC--- 238
Query: 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
+ + G HT I D +W+P + +++S DN L I++M N
Sbjct: 239 ---IATLSGYHTRTIFDLNWSP-DSQLLASCGSDNRLCIYKMPAN 279
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 45/194 (23%), Positives = 91/194 (46%)
Query: 216 SLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-AHQS 274
++ +Q K + ++W+ + L S G+D+ + +W + S+ AH+
Sbjct: 3 NVREVQKLKASNKRLWSLSWNHKGSVLISS-GEDRVIKLWAKCNDQLWGSSFSLPEAHKK 61
Query: 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA-----LHTFDSHKEEVFQVGWNPKN 329
+ C+ ++P +I A+ S D TV ++ + + +A L + + H EV V W P
Sbjct: 62 SIRCVTWSPCGTYI-ASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSG 120
Query: 330 ETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV 389
++A+C GR VW L D+E ED + + + H+ + +W+P + V
Sbjct: 121 H-LIATC--GRDKSVW-LWEFDDE---EDVQ-----CVSVLQPHSQDVKSVAWHPHGE-V 167
Query: 390 ISSVAEDNILQIWQ 403
+ S + DN + +++
Sbjct: 168 LVSTSYDNKINVYR 181
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/176 (31%), Positives = 85/176 (48%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
LRGH Y + G LLS S+D I WD+ S +++ H V D+
Sbjct: 338 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLG------SFTNTVLYQGHAYPVWDL 390
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDL-RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
Y F S D+ +W RT P++ H ++V+C+ F+P N LATG
Sbjct: 391 DISPYSLY-FASGSHDRTARLWSFDRT----YPLRIYAGHLADVDCVKFHP-NSNYLATG 444
Query: 293 STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
STDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +WDL+
Sbjct: 445 STDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLA 498
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/112 (30%), Positives = 63/112 (56%)
Query: 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L +GS D + LW +A + S+ ++F H G V +A+ +YL S G+DQ L
Sbjct: 440 YLATGSTDKTVRLW---SAQQGNSV---RLFTGHRGPVLSLAFSPNGKYL-ASAGEDQRL 492
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
+WDL + ++ K ++ H + L F+P + ++A+ S D +V+++D+R
Sbjct: 493 KLWDLASGTLYKELRG---HTDNITSLTFSP-DSGLIASASMDNSVRVWDIR 540
Score = 124 (48.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 39/125 (31%), Positives = 65/125 (52%)
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
N LATGSTDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKL 494
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
WDL+ + EL GHT I+ +++P + +I+S + DN +++W +
Sbjct: 495 WDLASGTLYK----------ELR----GHTDNITSLTFSP-DSGLIASASMDNSVRVWDI 539
Query: 405 AENIY 409
N Y
Sbjct: 540 -RNTY 543
Score = 39 (18.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226
L +G D++ I LW + + + + ++H
Sbjct: 283 LAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIH 315
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 63/226 (27%), Positives = 97/226 (42%)
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
L L GHS+ +++ EG + +G+ I LWD+ A ++L H
Sbjct: 53 LSLYGHSSGIDSVTFDA-SEGLVAAGAASGTIKLWDLEEAKVVRTLTG------HRSNCV 105
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
V +H E+ F S D L IWD+R + + H VN L F P WI++
Sbjct: 106 SVNFHPFGEF-FASGSLDTNLKIWDIRKKGC---IHTYKGHTRGVNVLRFTPDGRWIVS- 160
Query: 292 GSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
G D VK++DL LH F SH+ ++ + ++P +E +LA+ + + WDL +
Sbjct: 161 GGEDNVVKVWDLTA-GKLLHEFKSHEGKIQSLDFHP-HEFLLATGSADKTVKFWDLETFE 218
Query: 352 ------EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP--CEDWV 389
E T P+ + G + FSW P C D V
Sbjct: 219 LIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWEPIRCHDGV 264
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 42/157 (26%), Positives = 78/157 (49%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L++G +D ++ LW I K + ++ H ++ V + E L + +
Sbjct: 32 LVTGGEDHKVNLWAIG-----KPNAILSLYG-HSSGIDSVTFDAS-EGLVAAGAASGTIK 84
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLA--FNPFNEWILATGSTDKTVKLFDLRKISTALH 311
+WDL +K V+++ H+S NC++ F+PF E+ A+GS D +K++D+RK +H
Sbjct: 85 LWDLEE---AKVVRTLTGHRS--NCVSVNFHPFGEFF-ASGSLDTNLKIWDIRK-KGCIH 137
Query: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
T+ H V + + P I++ + VWDL+
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWIVSGG-EDNVVKVWDLT 173
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279
+Q F H V + + + + G+D + +W + P+ + S+ H S ++ +
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNA---ILSLYGHSSGIDSV 65
Query: 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLG 339
F+ +E ++A G+ T+KL+DL + + + T H+ V ++P E AS L
Sbjct: 66 TFDA-SEGLVAAGAASGTIKLWDLEE-AKVVRTLTGHRSNCVSVNFHPFGE-FFASGSLD 122
Query: 340 RRLMVWDLSR 349
L +WD+ +
Sbjct: 123 TNLKIWDIRK 132
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 157 (60.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 44/144 (30%), Positives = 68/144 (47%)
Query: 162 PPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ 221
P L +P + L GHS E + ++ + ++ SGS D I LW N +N
Sbjct: 44 PRLSSLQAPLMELSGHSGEIFCAKFNSAGQ-YIASGSMDRSILLWRANGDCENYG----- 97
Query: 222 IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF 281
I H G + D+ W + +F S D +L WDL T + ++ V H+ +N L
Sbjct: 98 ILSGHRGAILDLQWSRDSDIIF-SASADMHLASWDLTT---GERIRRYVGHEEVINSLDI 153
Query: 282 NPFNEWILATGSTDKTVKLFDLRK 305
+ E IL +GS D T+ ++D RK
Sbjct: 154 SKRGEEILFSGSDDGTIGIWDPRK 177
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 48/211 (22%), Positives = 86/211 (40%)
Query: 165 DGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK 224
+G C L GH L WS+ + + S S D + WD+ E ++ +
Sbjct: 90 NGDCENYGILSGHRGAILDLQWSRDSD-IIFSASADMHLASWDLTTG------ERIRRYV 142
Query: 225 VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
HE V+ + R E + S DD + IWD R + ++S V +A +
Sbjct: 143 GHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRKKHAADYIES----DFPVTAVAISEA 198
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
I + G D +K++D+RK ++ H++ + + +P ++++L S +
Sbjct: 199 GNEIYS-GGIDNDIKVWDVRK-KAVVYNMAGHRDTITTLKVSPDSQSLL-SYAMDSTART 255
Query: 345 WDLSRIDEEQTPEDAEDGPP---ELLFIHGG 372
WD+ + DG P E + GG
Sbjct: 256 WDIRPFAPTERHIRTFDGAPMGIEKNLVRGG 286
Score = 50 (22.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 289 LATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+A G+ D TV ++ + + HK V V ++P E ++ S + L+V +L
Sbjct: 294 VAMGAADGTVVIWS-NETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLVGEL 351
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 46/181 (25%), Positives = 83/181 (45%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K ++LS D +WD + EA Q F H DV W
Sbjct: 275 HKGPIFALKWNK-KGNYVLSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW- 326
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
++ F S D + + L PV++ H +EVN + ++P + +LA+ S D
Sbjct: 327 -QNNMTFASCSTDMCIHVCRL---GCDHPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDM 381
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP + +LAS + +WD+
Sbjct: 382 TLKIWSMKQ-DACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE 440
Query: 349 R 349
+
Sbjct: 441 Q 441
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 74/292 (25%), Positives = 121/292 (41%)
Query: 136 QNPFLIATKTVSAEVY-VFDYSKHPSKP-PLDGACS-PDLR---LRGHSTEGYGLSWSKF 189
QNP TV+ E + + H SKP +DG P + LRGH +E + +W+
Sbjct: 132 QNPPKNREATVNGEENGAHEINNH-SKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPV 190
Query: 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-----DVA---WHLRHEY 241
+ L SGS D+ +W++N S + + + EG + DV W+
Sbjct: 191 SD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTL 249
Query: 242 L-FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L GS D + IW T + ++ H+ + L +N ++L+ G DKT +
Sbjct: 250 LAMGSY--DGFARIW---TEN-GNLASTLGQHKGPIFALKWNKKGNYVLSAG-VDKTTII 302
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
+D A F H V W +N ASC + V L
Sbjct: 303 WDAHT-GEAKQQFPFHSAPALDVDW--QNNMTFASCSTDMCIHVCRLGC----------- 348
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI-YHD 411
D P + GHT++++ W+P +++S ++D L+IW M ++ HD
Sbjct: 349 DHPVKTF---QGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHD 396
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 43/185 (23%), Positives = 84/185 (45%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDI--NAAPKNKSLEAMQI 222
G P +GH+ E + W G LL+ SDD + +W + +A + + +I
Sbjct: 347 GCDHPVKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEI 404
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD+ + +++ HQ V +AF+
Sbjct: 405 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCT---HTLMKHQEPVYSVAFS 461
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P ++ LA+GS DK V +++ + + +H++ +F+V WN + + + AS G +
Sbjct: 462 PDGKY-LASGSFDKYVHIWNTQS-GSLVHSYQG-TGGIFEVCWNARGDKVGASASDGS-V 517
Query: 343 MVWDL 347
V DL
Sbjct: 518 CVLDL 522
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 42/183 (22%), Positives = 77/183 (42%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + Y+ S G D+ +IWD T Q H + L + N
Sbjct: 275 HKGPIFALKWNKKGNYVL-SAGVDKTTIIWDAHTGEAK---QQFPFHSAPA--LDVDWQN 328
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + TF H EV + W+P +LASC L +W
Sbjct: 329 NMTFASCSTDMCIHVCRLG-CDHPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIW 386
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T + NP +++S + D+ +++W +
Sbjct: 387 SMK---QDACVHDLQAHSKEIYTIKWSPTGPATS---NPNSSIMLASASFDSTVRLWDVE 440
Query: 406 ENI 408
+ +
Sbjct: 441 QGV 443
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/176 (31%), Positives = 85/176 (48%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
LRGH Y + G LLS S+D I WD+ S +++ H V D+
Sbjct: 356 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLG------SFTNTVLYQGHAYPVWDL 408
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDL-RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
Y F S D+ +W RT P++ H ++V+C+ F+P N LATG
Sbjct: 409 DISPYSLY-FASGSHDRTARLWSFDRT----YPLRIYAGHLADVDCVKFHP-NSNYLATG 462
Query: 293 STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
STDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +WDL+
Sbjct: 463 STDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLA 516
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/112 (30%), Positives = 63/112 (56%)
Query: 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L +GS D + LW +A + S+ ++F H G V +A+ +YL S G+DQ L
Sbjct: 458 YLATGSTDKTVRLW---SAQQGNSV---RLFTGHRGPVLSLAFSPNGKYL-ASAGEDQRL 510
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
+WDL + ++ K ++ H + L F+P + ++A+ S D +V+++D+R
Sbjct: 511 KLWDLASGTLYKELRG---HTDNITSLTFSPDSS-LIASASMDNSVRVWDIR 558
Score = 123 (48.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 39/125 (31%), Positives = 65/125 (52%)
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
N LATGSTDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +
Sbjct: 455 NSNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKL 512
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
WDL+ + EL GHT I+ +++P + +I+S + DN +++W +
Sbjct: 513 WDLASGTLYK----------ELR----GHTDNITSLTFSP-DSSLIASASMDNSVRVWDI 557
Query: 405 AENIY 409
N Y
Sbjct: 558 -RNTY 561
Score = 39 (18.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226
L +G D++ I LW + + + + ++H
Sbjct: 301 LAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIH 333
>UNIPROTKB|B3KPW7 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010165
HOVERGEN:HBG005409 UniGene:Hs.435237 HGNC:HGNC:3439 EMBL:AC022445
EMBL:AC104113 EMBL:AK056931 IPI:IPI01015409 SMR:B3KPW7
STRING:B3KPW7 Ensembl:ENST00000426742 Uniprot:B3KPW7
Length = 338
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 54/222 (24%), Positives = 96/222 (43%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFK-------VHEGVVEDVAWHLRHEYLFGSV 246
+LSG D I L+D+ + + + VH VE V W+ +F S
Sbjct: 1 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 60
Query: 247 GDDQYLLIWD---LRTPSVSKPVQSVVAHQ-SEVNCLAFNPFNEWILATGSTDKTVKLFD 302
D+ L +WD L+T V ++V +H S V+ ++A G+ V+L D
Sbjct: 61 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVST------KHCLVAVGTRGPKVQLCD 114
Query: 303 LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362
L+ S + H H++E+ V W+P+ + ILA+ R+ +WD+ R D +G
Sbjct: 115 LKSGSCS-HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNG 173
Query: 363 PPELLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+ H K++ + + + +V DN +++W
Sbjct: 174 KKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLW 214
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+ W G S S D + +WD N +L+ +F E V + ++
Sbjct: 47 VQWYPHDTGMFTSSSFDKTLKVWDTN------TLQTADVFNFEETVYSHHMSPVSTKHCL 100
Query: 244 GSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+VG + + DL++ S S +Q H+ E+ ++++P ++ILAT S D VKL+D
Sbjct: 101 VAVGTRGPKVQLCDLKSGSCSHILQG---HRQEILAVSWSPRYDYILATASADSRVKLWD 157
Query: 303 LRKISTALHTFDSH 316
+R+ S L T D H
Sbjct: 158 VRRASGCLITLDQH 171
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 56/228 (24%), Positives = 97/228 (42%)
Query: 177 HSTEGY-GLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H E GL+++ + + SDD +WD + + L H V + W
Sbjct: 215 HKDEAIRGLAFAP-TDVKFATASDDGTARVWDFARYTEERVLRG------HGAEVRCIDW 267
Query: 236 HLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGST 294
H + GS Q + IWD ++ S +Q H+S V + FN W+L TG
Sbjct: 268 HPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQE---HKSSVMAVEFNKNGNWLL-TGGR 323
Query: 295 DKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354
D VK++D+R + + T+ +HK+EV + W+P +E + S ++ W +
Sbjct: 324 DHLVKMYDIRMMKE-MRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMV------- 375
Query: 355 TPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
DG E+ + H I W+P ++++ + DN + W
Sbjct: 376 ------DGEKEIGLLEHAHDQAIWSMKWHPLGH-ILATGSNDNNTKFW 416
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQ--ICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
LRGH E + W K G + +GS D Q + +WD PK+ S + + H+ V
Sbjct: 255 LRGHGAEVRCIDWHPTK-GLIATGSRDTQQPVKIWD----PKSGS--CLATLQEHKSSVM 307
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
V ++ +L G D + ++D+R + K +++ AH+ EV LA++P +E + +
Sbjct: 308 AVEFNKNGNWLLTG-GRDHLVKMYDIR---MMKEMRTYRAHKKEVISLAWHPIHEGLFVS 363
Query: 292 GSTDKTVKLFDL---RKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
G D ++ + + ++I H +H + ++ + W+P ILA+ W +
Sbjct: 364 GGGDGSIVYWMVDGEKEIGLLEH---AHDQAIWSMKWHPLGH-ILATGSNDNNTKFWARN 419
Query: 349 RIDEEQTPED 358
R + T ED
Sbjct: 420 RPGD--TVED 427
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/218 (26%), Positives = 101/218 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH+ + + + +E + S S DA I +W + P N S +Q+ + HE V +
Sbjct: 260 LKGHTKKVTSVVFHPSQE-LVFSASPDATIRIWSV---P-NAS--CVQVVRAHESAVTGL 312
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H +YL S DDQY D++T V V + S + C F+P + I TG+
Sbjct: 313 SLHATGDYLLSS-SDDQYWAFSDIQTGRVLTKVTDETSGCS-LTCAQFHP-DGLIFGTGT 369
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +K++DL++ T + F H + + ++ +N LA+ + +WDL ++
Sbjct: 370 MDSQIKIWDLKE-RTNVANFPGHSGPITSIAFS-ENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 354 QTPE-DAEDGPPELLFIHGGHTSKI--SDFSWNPCEDW 388
+T + D L+F G + +D C+ W
Sbjct: 428 KTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQW 465
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/218 (26%), Positives = 101/218 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH+ + + + +E + S S DA I +W + P N S +Q+ + HE V +
Sbjct: 260 LKGHTKKVTSVVFHPSQE-LVFSASPDATIRIWSV---P-NAS--CVQVVRAHESAVTGL 312
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H +YL S DDQY D++T V V + S + C F+P + I TG+
Sbjct: 313 SLHATGDYLLSS-SDDQYWAFSDIQTGRVLTKVTDETSGCS-LTCAQFHP-DGLIFGTGT 369
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +K++DL++ T + F H + + ++ +N LA+ + +WDL ++
Sbjct: 370 MDSQIKIWDLKE-RTNVANFPGHSGPITSIAFS-ENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 354 QTPE-DAEDGPPELLFIHGGHTSKI--SDFSWNPCEDW 388
+T + D L+F G + +D C+ W
Sbjct: 428 KTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQW 465
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/218 (26%), Positives = 101/218 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH+ + + + +E + S S DA I +W + P N S +Q+ + HE V +
Sbjct: 260 LKGHTKKVTSVVFHPSQE-LVFSASPDATIRIWSV---P-NTS--CVQVVRAHESAVTGL 312
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H +YL S DDQY D++T V V + S + C F+P + I TG+
Sbjct: 313 SLHATGDYLLSS-SDDQYWAFSDIQTGRVLTKVTDETSGCS-LTCAQFHP-DGLIFGTGT 369
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +K++DL++ T + F H + + ++ +N LA+ + +WDL ++
Sbjct: 370 MDSQIKIWDLKE-RTNVANFPGHSGPITSIAFS-ENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 354 QTPE-DAEDGPPELLFIHGGHTSKI--SDFSWNPCEDW 388
+T + D L+F G + +D C+ W
Sbjct: 428 KTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQW 465
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/218 (26%), Positives = 101/218 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH+ + + + +E + S S DA I +W + P N S +Q+ + HE V +
Sbjct: 260 LKGHTKKVTSVVFHPSQE-LVFSASPDATIRIWSV---P-NTS--CVQVVRAHESAVTGL 312
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H +YL S DDQY D++T V V + S + C F+P + I TG+
Sbjct: 313 SLHATGDYLLSS-SDDQYWAFSDIQTGRVLTKVTDETSGCS-LTCAQFHP-DGLIFGTGT 369
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +K++DL++ T + F H + + ++ +N LA+ + +WDL ++
Sbjct: 370 MDSQIKIWDLKE-RTNVANFPGHSGPITSIAFS-ENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 354 QTPE-DAEDGPPELLFIHGGHTSKI--SDFSWNPCEDW 388
+T + D L+F G + +D C+ W
Sbjct: 428 KTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQW 465
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/218 (26%), Positives = 101/218 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH+ + + + +E + S S DA I +W + P N S +Q+ + HE V +
Sbjct: 260 LKGHTKKVTSVVFHPSQE-LVFSASPDATIRIWSV---P-NTS--CVQVVRAHESAVTGL 312
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H +YL S DDQY D++T V V + S + C F+P + I TG+
Sbjct: 313 SLHATGDYLLSS-SDDQYWAFSDIQTGRVLTKVTDETSGCS-LTCAQFHP-DGLIFGTGT 369
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +K++DL++ T + F H + + ++ +N LA+ + +WDL ++
Sbjct: 370 MDSQIKIWDLKE-RTNVANFPGHSGPITSIAFS-ENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 354 QTPE-DAEDGPPELLFIHGGHTSKI--SDFSWNPCEDW 388
+T + D L+F G + +D C+ W
Sbjct: 428 KTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQW 465
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 50/181 (27%), Positives = 81/181 (44%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
LRGH W + + ++ S S D ++ LWD+ K +S FK H+ +V +
Sbjct: 76 LRGHKNAVLQAKWLQ-DDNYICSASADHKLFLWDVECESKLRS------FKGHDNIVNGL 128
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H LF S DD L WD+R SK ++ H + + + E++ T
Sbjct: 129 DI-INHN-LFVSCSDDNTLKFWDIR----SKWAVHIIKHDFPLLSVCSDKKGEFLF-TSC 181
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D T+K +D + TF HK+ + + N K+ET+LAS + WD+ E
Sbjct: 182 VDNTIKKYDCKNYKLK-DTFIGHKDYITGLDIN-KDETMLASISADESICFWDIQPFSCE 239
Query: 354 Q 354
+
Sbjct: 240 E 240
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/218 (26%), Positives = 101/218 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GHS + + + ++ + S S DA I +W + P N S +Q+ + HEG V +
Sbjct: 261 LKGHSKKVTSVVFHPSQD-LVFSASPDATIRIWSV---P-NAS--CVQVVRAHEGSVTGL 313
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H +YL S DDQY D++T V V + + C F+P + I TG+
Sbjct: 314 SLHATGDYLLSS-SDDQYWAFSDIQTGRVLTKVTDE-SSGCALTCAQFHP-DGLIFGTGT 370
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +K++DL++ T + F H + + ++ +N LA+ + +WDL ++
Sbjct: 371 MDSQIKIWDLKE-RTNVANFPGHSGPITSIAFS-ENGYYLATAADDSSVKLWDLRKLKNF 428
Query: 354 QTPE-DAEDGPPELLFIHGGHTSKI--SDFSWNPCEDW 388
+T + D L+F G + +D C+ W
Sbjct: 429 KTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQW 466
>UNIPROTKB|E2RFS7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AAEX03001458
RefSeq:XP_544353.1 ProteinModelPortal:E2RFS7
Ensembl:ENSCAFT00000011467 GeneID:487225 KEGG:cfa:487225
NextBio:20860845 Uniprot:E2RFS7
Length = 396
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 53/222 (23%), Positives = 99/222 (44%)
Query: 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-------HEGVVEDVAWHLRHEYLFGS 245
++LSG D I L+D+ + + + V H+ VE V W+ +F S
Sbjct: 58 YMLSGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRNHPDVHKYSVETVQWYPHDTGMFTS 117
Query: 246 VGDDQYLLIWD---LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
D+ L +WD L+T V ++V +H ++ +A ++A G+ V+L D
Sbjct: 118 SSFDKTLKVWDTNTLQTADVFNFEETVYSHH--MSPVATK---HCLVAVGTRGPKVQLCD 172
Query: 303 LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362
L+ S + H H++E+ V W+P+ E +LA+ R+ +WD+ R D +G
Sbjct: 173 LKSGSCS-HILQGHRQEILAVSWSPRCEYVLATASADSRVKLWDVRRASGCLITLDQHNG 231
Query: 363 PPELLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+ H K++ + + + +V DN +++W
Sbjct: 232 KKSQAVESANTAHNGKVNGLCFTN-DGLHLLTVGTDNRMRLW 272
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+ W G S S D + +WD N +L+ +F E V + ++
Sbjct: 105 VQWYPHDTGMFTSSSFDKTLKVWDTN------TLQTADVFNFEETVYSHHMSPVATKHCL 158
Query: 244 GSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+VG + + DL++ S S +Q H+ E+ ++++P E++LAT S D VKL+D
Sbjct: 159 VAVGTRGPKVQLCDLKSGSCSHILQG---HRQEILAVSWSPRCEYVLATASADSRVKLWD 215
Query: 303 LRKISTALHTFDSH 316
+R+ S L T D H
Sbjct: 216 VRRASGCLITLDQH 229
>MGI|MGI:1919241 [details] [associations]
symbol:Ercc8 "excision repaiross-complementing rodent repair
deficiency, complementation group 8" species:10090 "Mus musculus"
[GO:0000109 "nucleotide-excision repair complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0009411 "response to UV" evidence=ISO;IMP]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0016363 "nuclear
matrix" evidence=ISO] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1919241 GO:GO:0009411
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 CTD:1161 GeneTree:ENSGT00390000009065
HOVERGEN:HBG005409 OMA:TMLRGHY OrthoDB:EOG4SN1NR EMBL:AJ427222
EMBL:AK010576 EMBL:AK157175 EMBL:BC037200 IPI:IPI00311474
RefSeq:NP_082318.2 UniGene:Mm.212208 ProteinModelPortal:Q8CFD5
SMR:Q8CFD5 STRING:Q8CFD5 PhosphoSite:Q8CFD5 PRIDE:Q8CFD5
Ensembl:ENSMUST00000054835 GeneID:71991 KEGG:mmu:71991
UCSC:uc007rux.1 InParanoid:Q8CFD5 NextBio:335154 Bgee:Q8CFD5
Genevestigator:Q8CFD5 GermOnline:ENSMUSG00000021694 Uniprot:Q8CFD5
Length = 397
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 52/224 (23%), Positives = 96/224 (42%)
Query: 191 EG-HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-------HEGVVEDVAWHLRHEYL 242
EG ++LSG D + L+D+ A + + V H+ VE V W+ +
Sbjct: 55 EGRYMLSGGSDGVVVLYDLENASRQPHYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGM 114
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF--NEWILATGSTDKTVKL 300
F S D+ L +WD T + V + V +P ++A G+ V+L
Sbjct: 115 FTSSSFDKTLKVWDTNTLQAA----DVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQL 170
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
DL+ S + H H++E+ V W+P+++ ILA+ R+ +WD+ R D
Sbjct: 171 CDLKSGSCS-HILQGHRQEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLTLDQH 229
Query: 361 DGPPELLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+G + H K++ + + + ++ DN +++W
Sbjct: 230 NGKKSQAAESANTAHNGKVNGLCFTS-DGLHLLTIGTDNRMRLW 272
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 44/152 (28%), Positives = 72/152 (47%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
G PD+ +S E + W G S S D + +WD N +L+A +F
Sbjct: 91 GRSHPDVHK--YSVET--VQWYPHDTGMFTSSSFDKTLKVWDTN------TLQAADVFNF 140
Query: 226 HEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
E V ++ +VG + + DL++ S S +Q H+ E+ ++++P
Sbjct: 141 EETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSHILQG---HRQEILAVSWSPR 197
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
+++ILAT S D VKL+D+R+ S L T D H
Sbjct: 198 HDYILATASADSRVKLWDVRRASGCLLTLDQH 229
>UNIPROTKB|Q5BIM8 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9913 "Bos taurus" [GO:0009411 "response to UV"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISS] [GO:0032403
"protein complex binding" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=ISS] [GO:0006289 "nucleotide-excision
repair" evidence=ISS] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0043234
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 EMBL:BT021196 IPI:IPI00699947 RefSeq:NP_001103651.1
UniGene:Bt.33395 ProteinModelPortal:Q5BIM8 STRING:Q5BIM8
Ensembl:ENSBTAT00000028792 GeneID:518857 KEGG:bta:518857 CTD:1161
GeneTree:ENSGT00390000009065 HOVERGEN:HBG005409 OMA:TMLRGHY
NextBio:20872751 Uniprot:Q5BIM8
Length = 397
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/224 (24%), Positives = 95/224 (42%)
Query: 191 EG-HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-------HEGVVEDVAWHLRHEYL 242
EG ++LSG D I L+D+ + + + V H+ VE V W+ +
Sbjct: 55 EGRYMLSGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGM 114
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF--NEWILATGSTDKTVKL 300
F S D+ L +WD T ++ V + V +P ++A G+ V+L
Sbjct: 115 FTSSSFDKTLKVWDTNTLQIA----DVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQL 170
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
DL+ S + H H++E+ V W+P+ E ILA+ R +WD+ R D
Sbjct: 171 CDLKSGSCS-HILQGHRQEILAVSWSPRYEYILATASADSRAKLWDVRRASGCLITLDQH 229
Query: 361 DGPPELLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+G + H K++ + + + +V DN +++W
Sbjct: 230 NGKKSQAAESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLW 272
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 43/152 (28%), Positives = 70/152 (46%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
G PD+ +S E + W G S S D + +WD N +L+ +F
Sbjct: 91 GRSHPDVHK--YSVET--VQWYPHDTGMFTSSSFDKTLKVWDTN------TLQIADVFNF 140
Query: 226 HEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
E V + ++ +VG + + DL++ S S +Q H+ E+ ++++P
Sbjct: 141 EETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSHILQG---HRQEILAVSWSPR 197
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
E+ILAT S D KL+D+R+ S L T D H
Sbjct: 198 YEYILATASADSRAKLWDVRRASGCLITLDQH 229
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/218 (26%), Positives = 101/218 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH+ + + + +E + S S DA I +W + P N S +Q+ + HE V +
Sbjct: 269 LKGHTKKVTSVVFHPSQE-LVFSASPDATIRIWSV---P-NAS--CVQVVRAHESAVTGL 321
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H +YL S DDQY D++T V V + S + C F+P + I TG+
Sbjct: 322 SLHATGDYLLSS-SDDQYWAFSDIQTGRVLTKVTDETSGCS-LTCAQFHP-DGLIFGTGT 378
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +K++DL++ T + F H + + ++ +N LA+ + +WDL ++
Sbjct: 379 MDSQIKIWDLKE-RTNVANFPGHSGPITSIAFS-ENGYYLATAADDSSVKLWDLRKLKNF 436
Query: 354 QTPE-DAEDGPPELLFIHGGHTSKI--SDFSWNPCEDW 388
+T + D L+F G + +D C+ W
Sbjct: 437 KTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQW 474
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K +LS D +WD + EA Q F H DV W
Sbjct: 265 HKGPIFALKWNK-KGNFILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDWQ 317
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
+ F S D + + L +P+++ H +EVN + ++P +LA+ S D
Sbjct: 318 SNNT--FASCSTDMCIHVCKL---GQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDM 371
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP +LAS + +WD+
Sbjct: 372 TLKIWSMKQ-DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD 430
Query: 349 R 349
R
Sbjct: 431 R 431
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 61/248 (24%), Positives = 106/248 (42%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-- 231
LRGH +E + +W+ + L SGS D+ +W+++ + S + + + EG +
Sbjct: 165 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 232 ---DVA---WHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
DV W+ L GS D + IW + +++ + H+ + L +N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSY--DGFARIWT-KDGNLASTLGQ---HKGPIFALKWNKK 277
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
+IL+ G DKT ++D A F H V W N ASC + V
Sbjct: 278 GNFILSAG-VDKTTIIWDAHT-GEAKQQFPFHSAPALDVDWQSNNT--FASCSTDMCIHV 333
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
L +D P + GHT++++ W+P + +++S ++D L+IW M
Sbjct: 334 CKLG-----------QDRPIKTF---QGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSM 378
Query: 405 AE-NIYHD 411
+ N HD
Sbjct: 379 KQDNCVHD 386
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/183 (22%), Positives = 81/183 (44%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + ++ S G D+ +IWD T + A +V+ + N F
Sbjct: 265 HKGPIFALKWNKKGNFIL-SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF- 322
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + + TF H EV + W+P +LASC L +W
Sbjct: 323 ----ASCSTDMCIHVCKLGQ-DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIW 376
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T ++ NP + +++S + D+ +++W +
Sbjct: 377 SMK---QDNCVHDLQAHNKEIYTIKWSPTGPGTN---NPNANLMLASASFDSTVRLWDVD 430
Query: 406 ENI 408
I
Sbjct: 431 RGI 433
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279
++ F+ H V + W L S DD L IW ++ + V + AH E+ +
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC---VHDLQAHNKEIYTI 397
Query: 280 AF--------NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331
+ NP +LA+ S D TV+L+D+ + +HT H+E V+ V ++P
Sbjct: 398 KWSPTGPGTNNPNANLMLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSPDGR- 455
Query: 332 ILASCCLGRRLMVWD 346
LAS + + +W+
Sbjct: 456 YLASGSFDKCVHIWN 470
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K +LS D +WD + EA Q F H DV W
Sbjct: 265 HKGPIFALKWNK-KGNFILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDWQ 317
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
+ F S D + + L +P+++ H +EVN + ++P +LA+ S D
Sbjct: 318 SNNT--FASCSTDMCIHVCKL---GQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDM 371
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP +LAS + +WD+
Sbjct: 372 TLKIWSMKQ-DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD 430
Query: 349 R 349
R
Sbjct: 431 R 431
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 61/248 (24%), Positives = 106/248 (42%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-- 231
LRGH +E + +W+ + L SGS D+ +W+++ + S + + + EG +
Sbjct: 165 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 232 ---DVA---WHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
DV W+ L GS D + IW + +++ + H+ + L +N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSY--DGFARIWT-KDGNLASTLGQ---HKGPIFALKWNKK 277
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
+IL+ G DKT ++D A F H V W N ASC + V
Sbjct: 278 GNFILSAG-VDKTTIIWDAHT-GEAKQQFPFHSAPALDVDWQSNNT--FASCSTDMCIHV 333
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
L +D P + GHT++++ W+P + +++S ++D L+IW M
Sbjct: 334 CKLG-----------QDRPIKTF---QGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSM 378
Query: 405 AE-NIYHD 411
+ N HD
Sbjct: 379 KQDNCVHD 386
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/183 (22%), Positives = 81/183 (44%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + ++ S G D+ +IWD T + A +V+ + N F
Sbjct: 265 HKGPIFALKWNKKGNFIL-SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF- 322
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + + TF H EV + W+P +LASC L +W
Sbjct: 323 ----ASCSTDMCIHVCKLGQ-DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIW 376
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T ++ NP + +++S + D+ +++W +
Sbjct: 377 SMK---QDNCVHDLQAHNKEIYTIKWSPTGPGTN---NPNANLMLASASFDSTVRLWDVD 430
Query: 406 ENI 408
I
Sbjct: 431 RGI 433
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279
++ F+ H V + W L S DD L IW ++ + V + AH E+ +
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC---VHDLQAHNKEIYTI 397
Query: 280 AF--------NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331
+ NP +LA+ S D TV+L+D+ + +HT H+E V+ V ++P
Sbjct: 398 KWSPTGPGTNNPNANLMLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSPDGR- 455
Query: 332 ILASCCLGRRLMVWD 346
LAS + + +W+
Sbjct: 456 YLASGSFDKCVHIWN 470
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K +LS D +WD + EA Q F H DV W
Sbjct: 265 HKGPIFALKWNK-KGNFILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDWQ 317
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
+ F S D + + L +P+++ H +EVN + ++P +LA+ S D
Sbjct: 318 SNNT--FASCSTDMCIHVCKL---GQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDM 371
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP +LAS + +WD+
Sbjct: 372 TLKIWSMKQ-DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD 430
Query: 349 R 349
R
Sbjct: 431 R 431
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/183 (22%), Positives = 81/183 (44%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + ++ S G D+ +IWD T + A +V+ + N F
Sbjct: 265 HKGPIFALKWNKKGNFIL-SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF- 322
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + + TF H EV + W+P +LASC L +W
Sbjct: 323 ----ASCSTDMCIHVCKLGQ-DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIW 376
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T ++ NP + +++S + D+ +++W +
Sbjct: 377 SMK---QDNCVHDLQAHNKEIYTIKWSPTGPGTN---NPNANLMLASASFDSTVRLWDVD 430
Query: 406 ENI 408
I
Sbjct: 431 RGI 433
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279
++ F+ H V + W L S DD L IW ++ + V + AH E+ +
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC---VHDLQAHNKEIYTI 397
Query: 280 AF--------NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331
+ NP +LA+ S D TV+L+D+ + +HT H+E V+ V ++P
Sbjct: 398 KWSPTGPGTNNPNANLMLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSPDGR- 455
Query: 332 ILASCCLGRRLMVWD 346
LAS + + +W+
Sbjct: 456 YLASGSFDKCVHIWN 470
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 42/146 (28%), Positives = 62/146 (42%)
Query: 212 PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA 271
P NK++ + + HE V AW+ + L GD IW+L S S P Q V+
Sbjct: 158 PSNKAV----VLRGHESEVFICAWNPVSDLLASGSGDST-ARIWNLSENSTSGPTQLVLR 212
Query: 272 H-----------QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEV 320
H +V L +N +LATGS D +++ K T HK +
Sbjct: 213 HCIREGGQDVPSNKDVTSLDWNSEGT-LLATGSYDGFARIWT--KDGNLASTLGQHKGPI 269
Query: 321 FQVGWNPKNETILASCCLGRRLMVWD 346
F + WN K IL S + + ++WD
Sbjct: 270 FALKWNKKGNFIL-SAGVDKTTIIWD 294
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K +LS D +WD + EA Q F H DV W
Sbjct: 265 HKGPIFALKWNK-KGNFILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDWQ 317
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
+ F S D + + L +P+++ H +EVN + ++P +LA+ S D
Sbjct: 318 SNNT--FASCSTDMCIHVCKL---GQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDM 371
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ +++ +H +H +E++ + W NP +LAS + +WD+
Sbjct: 372 TLKIWSMKQ-DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD 430
Query: 349 R 349
R
Sbjct: 431 R 431
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/183 (22%), Positives = 81/183 (44%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ + ++ S G D+ +IWD T + A +V+ + N F
Sbjct: 265 HKGPIFALKWNKKGNFIL-SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF- 322
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
A+ STD + + L + + TF H EV + W+P +LASC L +W
Sbjct: 323 ----ASCSTDMCIHVCKLGQ-DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIW 376
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
+ ++ D + E+ I T ++ NP + +++S + D+ +++W +
Sbjct: 377 SMK---QDNCVHDLQAHNKEIYTIKWSPTGPGTN---NPNANLMLASASFDSTVRLWDVD 430
Query: 406 ENI 408
I
Sbjct: 431 RGI 433
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279
++ F+ H V + W L S DD L IW ++ + V + AH E+ +
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC---VHDLQAHNKEIYTI 397
Query: 280 AF--------NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNET 331
+ NP +LA+ S D TV+L+D+ + +HT H+E V+ V ++P
Sbjct: 398 KWSPTGPGTNNPNANLMLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSPDGR- 455
Query: 332 ILASCCLGRRLMVWD 346
LAS + + +W+
Sbjct: 456 YLASGSFDKCVHIWN 470
>UNIPROTKB|Q32LP9 [details] [associations]
symbol:CORO2A "Coronin-2A" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=ISS] [GO:0030036
"actin cytoskeleton organization" evidence=ISS] [GO:0017053
"transcriptional repressor complex" evidence=ISS] [GO:0015629
"actin cytoskeleton" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015
GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
HSSP:O89053 EMBL:BC109477 IPI:IPI00696103 RefSeq:NP_001033309.1
UniGene:Bt.28800 ProteinModelPortal:Q32LP9 PRIDE:Q32LP9
Ensembl:ENSBTAT00000016014 GeneID:617620 KEGG:bta:617620 CTD:7464
InParanoid:Q32LP9 OMA:LLQMFYR OrthoDB:EOG4GXFMG NextBio:20900762
Uniprot:Q32LP9
Length = 525
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 55/199 (27%), Positives = 91/199 (45%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVA 234
GH + W+ F + + S S+DA I +WDI K+L A + V H V V
Sbjct: 80 GHRGNVLDVKWNPFNDFEIASCSEDATIKIWDIPKQLLTKNLTAFRKELVGHARKVGLVE 139
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
WH + S G D +++W+L + + PV+++ HQ + ++FN N +LAT
Sbjct: 140 WHPTAANILFSSGYDYKVMVWNLDSKESVIMSPVKTINCHQDVILSMSFNT-NGSLLATA 198
Query: 293 STDKTVKLFDLRKISTALH--TFDSHK-EEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
D+ +++ D R T L + H+ +V +G K + S R++ +WD
Sbjct: 199 CKDRKIRVLDPRA-GTVLQEANYKGHRANKVLFLGNLKKLLSTGTSRWNNRQMALWDQDD 257
Query: 350 IDEEQTPEDAEDGPPELLF 368
+ T D DG +LF
Sbjct: 258 LSVPVTEVDL-DGSSGVLF 275
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 50/196 (25%), Positives = 85/196 (43%)
Query: 168 CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE 227
C+ D +L GH + +SW K ++SG D I +WD ++ +L H+
Sbjct: 241 CTEDNQLVGHGWDVKCVSWHPQKS-LIVSGGKDNNIKIWDAKSSQNITTLHG------HK 293
Query: 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287
V V W+ ++ S DQ L ++D+RT K +Q+ H EV LA +P++E
Sbjct: 294 STVSKVEWNQNGNWIV-SASSDQLLKVFDIRT---MKEMQTFKGHGKEVTALALHPYHED 349
Query: 288 ILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+ +G D + + + +H +V+ + W+P ILAS W
Sbjct: 350 LFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGH-ILASGSNDHTTKFWSR 408
Query: 348 SRIDEEQTPEDAEDGP 363
+R T +D + P
Sbjct: 409 NR--PADTMKDKYNNP 422
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE-GVVED 232
L+ H + + WS E ++SG D I W N + ++IFK HE +
Sbjct: 163 LQAHDSAVRSIIWSH-NEDWMVSGDDSGNIKYWQPN-------MNNVKIFKAHEQSKIRG 214
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
+++ + S DD+ + IWD + +V H +V C++++P + ++ +G
Sbjct: 215 LSFSPT-DLKLASCADDKIIKIWDFARCTEDN---QLVGHGWDVKCVSWHP-QKSLIVSG 269
Query: 293 STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352
D +K++D K S + T HK V +V WN +N + S + L V+D+ + E
Sbjct: 270 GKDNNIKIWDA-KSSQNITTLHGHKSTVSKVEWN-QNGNWIVSASSDQLLKVFDIRTMKE 327
Query: 353 EQT 355
QT
Sbjct: 328 MQT 330
Score = 128 (50.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 48/190 (25%), Positives = 89/190 (46%)
Query: 163 PLDGACSPDLRLRGHSTEGYGL---SWSKFKEGH-LLSGSDDAQICLWDINAAPKNKSLE 218
P+ CS + + + Y + SW+ EG L++GS + LW N N E
Sbjct: 108 PITSVCSRFIHTSSNKVK-YPINCVSWTP--EGRRLVTGSSSGEFTLW--NGLTFN--FE 160
Query: 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ-YLLIWDLRTPSVSKPVQSVVAH-QSEV 276
I + H+ V + W +++ GDD + W P+++ V+ AH QS++
Sbjct: 161 T--ILQAHDSAVRSIIWSHNEDWMVS--GDDSGNIKYWQ---PNMNN-VKIFKAHEQSKI 212
Query: 277 NCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASC 336
L+F+P + LA+ + DK +K++D + T + H +V V W+P+ ++++ S
Sbjct: 213 RGLSFSP-TDLKLASCADDKIIKIWDFARC-TEDNQLVGHGWDVKCVSWHPQ-KSLIVSG 269
Query: 337 CLGRRLMVWD 346
+ +WD
Sbjct: 270 GKDNNIKIWD 279
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 33/140 (23%), Positives = 69/140 (49%)
Query: 263 SKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQ 322
S+ + ++ H+S V+ + +N WI++ S+D+ +K+FD+R + + TF H +EV
Sbjct: 283 SQNITTLHGHKSTVSKVEWNQNGNWIVSA-SSDQLLKVFDIRTMKE-MQTFKGHGKEVTA 340
Query: 323 VGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382
+ +P +E + S +++ W + PE + IH H + + SW
Sbjct: 341 LALHPYHEDLFVSGDKDGKILYWIVGN------PEPQAE-------IHSAHDADVWSLSW 387
Query: 383 NPCEDWVISSVAEDNILQIW 402
+P +++S + D+ + W
Sbjct: 388 HPIGH-ILASGSNDHTTKFW 406
>RGD|1311570 [details] [associations]
symbol:Ercc8 "excision repair cross-complementing rodent repair
deficiency, complementation group 8" species:10116 "Rattus
norvegicus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0009411 "response
to UV" evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311570 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K10570
EMBL:CH473955 CTD:1161 GeneTree:ENSGT00390000009065 OMA:TMLRGHY
RefSeq:NP_001101120.2 UniGene:Rn.107979 ProteinModelPortal:G3V7B8
Ensembl:ENSRNOT00000013598 GeneID:310071 KEGG:rno:310071
Uniprot:G3V7B8
Length = 397
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 54/224 (24%), Positives = 95/224 (42%)
Query: 191 EG-HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-------HEGVVEDVAWHLRHEYL 242
EG ++LSG D I L+D+ A + + V H+ VE V W+ +
Sbjct: 55 EGRYMLSGGSDGVIVLYDLENASRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGM 114
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF--NEWILATGSTDKTVKL 300
F S D+ L +WD T + V + V +P ++A G+ V+L
Sbjct: 115 FTSSSFDKTLKVWDTNTLQAA----DVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQL 170
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
DL+ S + H H++E+ V W+P+ + ILA+ R+ +WD+ R D
Sbjct: 171 CDLKSGSCS-HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLLTLDQH 229
Query: 361 DGPPELLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+G + H K++ + + + +V DN +++W
Sbjct: 230 NGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLW 272
Score = 134 (52.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 44/152 (28%), Positives = 71/152 (46%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
G PD+ +S E + W G S S D + +WD N +L+A +F
Sbjct: 91 GRSHPDVHK--YSVET--VQWYPHDTGMFTSSSFDKTLKVWDTN------TLQAADVFNF 140
Query: 226 HEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
E V ++ +VG + + DL++ S S +Q H+ E+ ++++P
Sbjct: 141 EETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSHILQG---HRQEILAVSWSPR 197
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
++ILAT S D VKL+D+R+ S L T D H
Sbjct: 198 YDYILATASADSRVKLWDVRRASGCLLTLDQH 229
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 172 (65.6 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 60/232 (25%), Positives = 102/232 (43%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
G + + L GH++ ++++ +E +L+G+ I LWD+ ++K + A F
Sbjct: 46 GKTTSPMSLCGHTSPVDSVAFNS-EEVLVLAGASSGVIKLWDLE---ESKMVRA---FTG 98
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H V +H E+L S D L +WD R +Q+ H ++ + F+P
Sbjct: 99 HRSNCSAVEFHPFGEFL-ASGSSDTNLRVWDTRKKGC---IQTYKGHTRGISTIEFSPDG 154
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
W+++ G D VK++DL LH F H+ + + ++P E +LA+ R + W
Sbjct: 155 RWVVS-GGLDNVVKVWDLTA-GKLLHEFKCHEGPIRSLDFHPL-EFLLATGSADRTVKFW 211
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHT--SKISD----FSWNP--CEDWV 389
DL + T G + F G T + D +SW P C D V
Sbjct: 212 DLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWEPVICRDGV 263
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 49/172 (28%), Positives = 84/172 (48%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
HS LS K LL+G DD ++ LW I K+ M + H V+ VA++
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIG-----KTTSPMSLCG-HTSPVDSVAFN 67
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
E L + + +WDL SK V++ H+S + + F+PF E+ LA+GS+D
Sbjct: 68 -SEEVLVLAGASSGVIKLWDLEE---SKMVRAFTGHRSNCSAVEFHPFGEF-LASGSSDT 122
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
++++D RK + T+ H + + ++P +++ L + VWDL+
Sbjct: 123 NLRVWDTRK-KGCIQTYKGHTRGISTIEFSPDGRWVVSGG-LDNVVKVWDLT 172
Score = 122 (48.0 bits), Expect = 0.00055, P = 0.00055
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 220 MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCL 279
+Q F H G V ++ + L + GDD + +W + + P+ S+ H S V+ +
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIG--KTTSPM-SLCGHTSPVDSV 64
Query: 280 AFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLG 339
AFN +LA G++ +KL+DL + S + F H+ V ++P E LAS
Sbjct: 65 AFNSEEVLVLA-GASSGVIKLWDLEE-SKMVRAFTGHRSNCSAVEFHPFGE-FLASGSSD 121
Query: 340 RRLMVWD 346
L VWD
Sbjct: 122 TNLRVWD 128
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/206 (26%), Positives = 90/206 (43%)
Query: 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH-LRHEYLFGSVGDDQYLLIWD 256
SDD + +WD + + I + H V+ V WH + + GS Q + WD
Sbjct: 221 SDDGTVRIWDFLRCHEER------ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
P + + ++ AH++ V + N W+L T S D KLFD+R + L F H
Sbjct: 275 ---PKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVFRGH 330
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376
K+E V W+P +E + AS L+ W + +++E G E+ H
Sbjct: 331 KKEATAVAWHPVHEGLFASGGSDGSLLFWHVG-VEKEV-------GGMEM-----AHEGM 377
Query: 377 ISDFSWNPCEDWVISSVAEDNILQIW 402
I +W+P ++ S + D+ + W
Sbjct: 378 IWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 72/320 (22%), Positives = 133/320 (41%)
Query: 37 THALEWPSLTVEWLPD-REEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQL-PLDDSEN 94
T+ ++ P V W P+ R G S + L + N L + + S N
Sbjct: 115 TNKVKCPVFVVRWTPEGRRLVTGA--SSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHN 172
Query: 95 DARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSAEVYV 152
D D + + +N V++ Q H + A + P N F AT + V +
Sbjct: 173 DMWMLTADHGGYVKYWQSNMNNVKMFQA--HKEAIREASFSPTDNKF--ATCSDDGTVRI 228
Query: 153 FDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ--ICLWDINA 210
+D+ + C + LRGH + + W K G ++SGS D+Q I WD
Sbjct: 229 WDFLR----------CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD--- 274
Query: 211 APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270
PK +++ H+ V +V +L +L + D ++D+R ++ + +Q
Sbjct: 275 -PKTG--QSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIR--NLKEELQVFR 328
Query: 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKN 329
H+ E +A++P +E + A+G +D ++ LF + + + +H+ ++ + W+P
Sbjct: 329 GHKKEATAVAWHPVHEGLFASGGSDGSL-LFWHVGVEKEVGGMEMAHEGMIWSLAWHPLG 387
Query: 330 ETILASCCLGRRLMVWDLSR 349
IL S W +R
Sbjct: 388 H-ILCSGSNDHTSKFWTRNR 406
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/206 (26%), Positives = 90/206 (43%)
Query: 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH-LRHEYLFGSVGDDQYLLIWD 256
SDD + +WD + + I + H V+ V WH + + GS Q + WD
Sbjct: 217 SDDGTVRIWDFLRCHEER------ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 270
Query: 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
P + + ++ AH++ V + N W+L T S D KLFD+R + L F H
Sbjct: 271 ---PKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVFRGH 326
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376
K+E V W+P +E + AS L+ W + +++E G E+ H
Sbjct: 327 KKEATAVAWHPVHEGLFASGGSDGSLLFWHVG-VEKEV-------GGMEM-----AHEGM 373
Query: 377 ISDFSWNPCEDWVISSVAEDNILQIW 402
I +W+P ++ S + D+ + W
Sbjct: 374 IWSLAWHPLGH-ILCSGSNDHTSKFW 398
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 72/320 (22%), Positives = 133/320 (41%)
Query: 37 THALEWPSLTVEWLPD-REEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQL-PLDDSEN 94
T+ ++ P V W P+ R G S + L + N L + + S N
Sbjct: 111 TNKVKCPVFVVRWTPEGRRLVTGA--SSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHN 168
Query: 95 DARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSAEVYV 152
D D + + +N V++ Q H + A + P N F AT + V +
Sbjct: 169 DMWMLTADHGGYVKYWQSNMNNVKMFQA--HKEAIREASFSPTDNKF--ATCSDDGTVRI 224
Query: 153 FDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ--ICLWDINA 210
+D+ + C + LRGH + + W K G ++SGS D+Q I WD
Sbjct: 225 WDFLR----------CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD--- 270
Query: 211 APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270
PK +++ H+ V +V +L +L + D ++D+R ++ + +Q
Sbjct: 271 -PKTG--QSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIR--NLKEELQVFR 324
Query: 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKN 329
H+ E +A++P +E + A+G +D ++ LF + + + +H+ ++ + W+P
Sbjct: 325 GHKKEATAVAWHPVHEGLFASGGSDGSL-LFWHVGVEKEVGGMEMAHEGMIWSLAWHPLG 383
Query: 330 ETILASCCLGRRLMVWDLSR 349
IL S W +R
Sbjct: 384 H-ILCSGSNDHTSKFWTRNR 402
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/206 (26%), Positives = 90/206 (43%)
Query: 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH-LRHEYLFGSVGDDQYLLIWD 256
SDD + +WD + + I + H V+ V WH + + GS Q + WD
Sbjct: 221 SDDGTVRIWDFLRCHEER------ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
P + + ++ AH++ V + N W+L T S D KLFD+R + L F H
Sbjct: 275 ---PKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVFRGH 330
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376
K+E V W+P +E + AS L+ W + +++E G E+ H
Sbjct: 331 KKEATAVAWHPVHEGLFASGGSDGSLLFWHVG-VEKEV-------GGMEM-----AHEGM 377
Query: 377 ISDFSWNPCEDWVISSVAEDNILQIW 402
I +W+P ++ S + D+ + W
Sbjct: 378 IWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 72/320 (22%), Positives = 133/320 (41%)
Query: 37 THALEWPSLTVEWLPD-REEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQL-PLDDSEN 94
T+ ++ P V W P+ R G S + L + N L + + S N
Sbjct: 115 TNKVKCPVFVVRWTPEGRRLVTGA--SSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHN 172
Query: 95 DARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSAEVYV 152
D D + + +N V++ Q H + A + P N F AT + V +
Sbjct: 173 DMWMLTADHGGYVKYWQSNMNNVKMFQA--HKEAIREASFSPTDNKF--ATCSDDGTVRI 228
Query: 153 FDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ--ICLWDINA 210
+D+ + C + LRGH + + W K G ++SGS D+Q I WD
Sbjct: 229 WDFLR----------CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD--- 274
Query: 211 APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270
PK +++ H+ V +V +L +L + D ++D+R ++ + +Q
Sbjct: 275 -PKTG--QSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIR--NLKEELQVFR 328
Query: 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKN 329
H+ E +A++P +E + A+G +D ++ LF + + + +H+ ++ + W+P
Sbjct: 329 GHKKEATAVAWHPVHEGLFASGGSDGSL-LFWHVGVEKEVGGMEMAHEGMIWSLAWHPLG 387
Query: 330 ETILASCCLGRRLMVWDLSR 349
IL S W +R
Sbjct: 388 H-ILCSGSNDHTSKFWTRNR 406
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/206 (26%), Positives = 90/206 (43%)
Query: 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH-LRHEYLFGSVGDDQYLLIWD 256
SDD + +WD + + I + H V+ V WH + + GS Q + WD
Sbjct: 221 SDDGTVRIWDFLRCHEER------ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
P + + ++ AH++ V + N W+L T S D KLFD+R + L F H
Sbjct: 275 ---PKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVFRGH 330
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376
K+E V W+P +E + AS L+ W + +++E G E+ H
Sbjct: 331 KKEATAVAWHPVHEGLFASGGSDGSLLFWHVG-VEKEV-------GGMEM-----AHEGM 377
Query: 377 ISDFSWNPCEDWVISSVAEDNILQIW 402
I +W+P ++ S + D+ + W
Sbjct: 378 IWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 139 (54.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 72/320 (22%), Positives = 133/320 (41%)
Query: 37 THALEWPSLTVEWLPD-REEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQL-PLDDSEN 94
T+ ++ P V W P+ R G S + L + N L + + S N
Sbjct: 115 TNKVKCPVFVVRWTPEGRRLVTGA--SSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHN 172
Query: 95 DARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSAEVYV 152
D D + + +N V++ Q H + A + P N F AT + V +
Sbjct: 173 DMWMLTADHGGYVKYWQSNMNNVKMFQA--HKEAIREASFSPTDNKF--ATCSDDGTVRI 228
Query: 153 FDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ--ICLWDINA 210
+D+ + C + LRGH + + W K G ++SGS D+Q I WD
Sbjct: 229 WDFLR----------CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD--- 274
Query: 211 APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270
PK +++ H+ V +V +L +L + D ++D+R ++ + +Q
Sbjct: 275 -PKTG--QSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIR--NLKEELQVFR 328
Query: 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKN 329
H+ E +A++P +E + A+G +D ++ LF + + + +H+ ++ + W+P
Sbjct: 329 GHKKEATAVAWHPVHEGLFASGGSDGSL-LFWHVGVEKEVGGMEMAHEGMIWSLAWHPLG 387
Query: 330 ETILASCCLGRRLMVWDLSR 349
IL S W +R
Sbjct: 388 H-ILCSGSNDHTSKFWTRNR 406
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 345 WDLSRIDEEQTPEDAED 361
W+ R +E+ P D ED
Sbjct: 1077 WEGRRPGDERFPRDPED 1093
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/206 (26%), Positives = 90/206 (43%)
Query: 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH-LRHEYLFGSVGDDQYLLIWD 256
SDD + +WD + + I + H V+ V WH + + GS Q + WD
Sbjct: 221 SDDGTVRIWDFLRCHEER------ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
P + + ++ AH++ V + N W+L T S D KLFD+R + L F H
Sbjct: 275 ---PKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVFRGH 330
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376
K+E V W+P +E + AS L+ W + +++E G E+ H
Sbjct: 331 KKEATAVAWHPVHEGLFASGGSDGSLLFWHVG-VEKEV-------GGMEM-----AHEGM 377
Query: 377 ISDFSWNPCEDWVISSVAEDNILQIW 402
I +W+P ++ S + D+ + W
Sbjct: 378 IWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 139 (54.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 72/320 (22%), Positives = 133/320 (41%)
Query: 37 THALEWPSLTVEWLPD-REEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQL-PLDDSEN 94
T+ ++ P V W P+ R G S + L + N L + + S N
Sbjct: 115 TNKVKCPVFVVRWTPEGRRLVTGA--SSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHN 172
Query: 95 DARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSAEVYV 152
D D + + +N V++ Q H + A + P N F AT + V +
Sbjct: 173 DMWMLTADHGGYVKYWQSNMNNVKMFQA--HKEAIREASFSPTDNKF--ATCSDDGTVRI 228
Query: 153 FDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ--ICLWDINA 210
+D+ + C + LRGH + + W K G ++SGS D+Q I WD
Sbjct: 229 WDFLR----------CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD--- 274
Query: 211 APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270
PK +++ H+ V +V +L +L + D ++D+R ++ + +Q
Sbjct: 275 -PKTG--QSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIR--NLKEELQVFR 328
Query: 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKN 329
H+ E +A++P +E + A+G +D ++ LF + + + +H+ ++ + W+P
Sbjct: 329 GHKKEATAVAWHPVHEGLFASGGSDGSL-LFWHVGVEKEVGGMEMAHEGMIWSLAWHPLG 387
Query: 330 ETILASCCLGRRLMVWDLSR 349
IL S W +R
Sbjct: 388 H-ILCSGSNDHTSKFWTRNR 406
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 345 WDLSRIDEEQTPEDAED 361
W+ R +E+ P D ED
Sbjct: 1077 WEGRRPGDERFPRDPED 1093
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/206 (26%), Positives = 90/206 (43%)
Query: 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH-LRHEYLFGSVGDDQYLLIWD 256
SDD + +WD + + I + H V+ V WH + + GS Q + WD
Sbjct: 221 SDDGTVRIWDFLRCHEER------ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
P + + ++ AH++ V + N W+L T S D KLFD+R + L F H
Sbjct: 275 ---PKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVFRGH 330
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376
K+E V W+P +E + AS L+ W + +++E G E+ H
Sbjct: 331 KKEATAVAWHPVHEGLFASGGSDGSLLFWHVG-VEKEV-------GGMEM-----AHEGM 377
Query: 377 ISDFSWNPCEDWVISSVAEDNILQIW 402
I +W+P ++ S + D+ + W
Sbjct: 378 IWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 72/320 (22%), Positives = 133/320 (41%)
Query: 37 THALEWPSLTVEWLPD-REEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQL-PLDDSEN 94
T+ ++ P V W P+ R G S + L + N L + + S N
Sbjct: 115 TNKVKCPVFVVRWTPEGRRLVTGA--SSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHN 172
Query: 95 DARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSAEVYV 152
D D + + +N V++ Q H + A + P N F AT + V +
Sbjct: 173 DMWMLTADHGGYVKYWQSNMNNVKMFQA--HKEAIREASFSPTDNKF--ATCSDDGTVRI 228
Query: 153 FDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ--ICLWDINA 210
+D+ + C + LRGH + + W K G ++SGS D+Q I WD
Sbjct: 229 WDFLR----------CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD--- 274
Query: 211 APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270
PK +++ H+ V +V +L +L + D ++D+R ++ + +Q
Sbjct: 275 -PKTG--QSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIR--NLKEELQVFR 328
Query: 271 AHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWNPKN 329
H+ E +A++P +E + A+G +D ++ LF + + + +H+ ++ + W+P
Sbjct: 329 GHKKEATAVAWHPVHEGLFASGGSDGSL-LFWHVGVEKEVGGMEMAHEGMIWSLAWHPLG 387
Query: 330 ETILASCCLGRRLMVWDLSR 349
IL S W +R
Sbjct: 388 H-ILCSGSNDHTSKFWTRNR 406
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 173 (66.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 57/176 (32%), Positives = 85/176 (48%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
LRGH Y + G LLS S+D I WD+ S +++ H V DV
Sbjct: 338 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLG------SFTNTVLYQGHAYPVWDV 390
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDL-RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
Y F S D+ +W RT P++ H ++V+C+ F+P N LATG
Sbjct: 391 DISPFSLY-FASGSHDRTARLWSFDRT----YPLRIYAGHLADVDCVKFHP-NSNYLATG 444
Query: 293 STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
STDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +WDL+
Sbjct: 445 STDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLA 498
Score = 137 (53.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 37/120 (30%), Positives = 68/120 (56%)
Query: 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L +GS D + LW +A + S+ ++F H G V +++ +YL S G+DQ L
Sbjct: 440 YLATGSTDKTVRLW---SAQQGNSV---RLFTGHRGPVLSLSFSPNGKYL-ASAGEDQRL 492
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHT 312
+WDL + ++ K ++ H + LAF+P + ++A+ S D +V+++D+R ST +T
Sbjct: 493 KLWDLASGTLFKELRG---HTDSITSLAFSP-DSGLIASASMDNSVRVWDIR--STCCNT 546
Score = 123 (48.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
N LATGSTDKTV+L+ ++ ++ F H+ V + ++P N LAS +RL +
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLSFSP-NGKYLASAGEDQRLKL 494
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIH-GGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
WDL+ G LF GHT I+ +++P + +I+S + DN +++W
Sbjct: 495 WDLA------------SGT---LFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWD 538
Query: 404 M 404
+
Sbjct: 539 I 539
Score = 38 (18.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 58 GKDYSVQKM-ILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDD 101
G D S K+ L + ++EP+++ ++++L D E + D+
Sbjct: 286 GFDNSCIKLWSLRSKKLKSEPHHVDTSRIRLACDTLEEEENEEDN 330
>TAIR|locus:2034990 [details] [associations]
symbol:AT1G18830 "AT1G18830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K14005
IPI:IPI00530822 RefSeq:NP_173317.2 UniGene:At.51670
ProteinModelPortal:F4ICD9 SMR:F4ICD9 EnsemblPlants:AT1G18830.1
GeneID:838464 KEGG:ath:AT1G18830 OMA:TELWEST Uniprot:F4ICD9
Length = 969
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 41/176 (23%), Positives = 80/176 (45%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L H GL ++ L SG+DD +C+WD+ A P S + + +
Sbjct: 111 LSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL-ANPSKPSHYLKGTGSYMQSEISSL 169
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP--FNEWILAT 291
+W+ +++ S + +IWD+ + +++ V + L ++P FN+ ++A+
Sbjct: 170 SWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLKTTV----RCSVLQWDPDHFNQILVAS 225
Query: 292 GS-TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
+ VKL D+R + + + TF H+ V + W P + L +C R + W+
Sbjct: 226 DEDSSPNVKLLDIRYLQSPVRTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWN 281
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 58/214 (27%), Positives = 104/214 (48%)
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSP-DLRLRGH--STEGYG-LSWSKF- 189
P++PF+ A A F S + LD + +L+L G S+E + L+W +
Sbjct: 17 PESPFIAAGTMAGAVDLSFSSSANLEIFELDFQSNDRELKLVGQCQSSERFNRLAWGSYG 76
Query: 190 --KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG 247
+G + G D I LW+ ++ + + K H+G V + ++++ S
Sbjct: 77 SGSDGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSK-HKGPVRGLEFNVKSPNQLASGA 135
Query: 248 DDQYLLIWDLRTPSV-SKPVQSVVAH-QSEVNCLAFNPFNEWILATGSTDKTVKLFDLR- 304
DD + IWDL PS S ++ ++ QSE++ L++N + +LA+ S + T ++D+
Sbjct: 136 DDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDVNN 195
Query: 305 -KISTALHTFDSHKEEVFQVGWNPK--NETILAS 335
KI T L T + + V Q W+P N+ ++AS
Sbjct: 196 EKIITDLKT--TVRCSVLQ--WDPDHFNQILVAS 225
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 173 (66.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 54/206 (26%), Positives = 90/206 (43%)
Query: 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH-LRHEYLFGSVGDDQYLLIWD 256
SDD + +WD + + I + H V+ V WH + + GS Q + WD
Sbjct: 222 SDDGTVRIWDFLRCHEER------ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 275
Query: 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSH 316
P + + ++ AH++ V + N W+L T S D KLFD+R + L F H
Sbjct: 276 ---PKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVFRGH 331
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376
K+E V W+P +E + AS L+ W + +++E G E+ H
Sbjct: 332 KKEATAVAWHPVHEGLFASGGSDGSLLFWHVG-VEKEV-------GGMEM-----AHEGM 378
Query: 377 ISDFSWNPCEDWVISSVAEDNILQIW 402
I +W+P ++ S + D+ + W
Sbjct: 379 IWSLAWHPLGH-ILCSGSNDHTSKFW 403
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 61/263 (23%), Positives = 114/263 (43%)
Query: 92 SENDARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVSAE 149
S ND D + + +N V++ Q H + A + P N F AT +
Sbjct: 171 SHNDMWMLTADHGGYVKYWQSNMNNVKMFQA--HKEAIREASFSPTDNKF--ATCSDDGT 226
Query: 150 VYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ--ICLWD 207
V ++D+ + C + LRGH + + W K G ++SGS D+Q I WD
Sbjct: 227 VRIWDFLR----------CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD 275
Query: 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267
PK +++ H+ V +V +L +L + D ++D+R ++ + +Q
Sbjct: 276 ----PKTG--QSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIR--NLKEELQ 326
Query: 268 SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFD-SHKEEVFQVGWN 326
H+ E +A++P +E + A+G +D ++ LF + + + +H+ ++ + W+
Sbjct: 327 VFRGHKKEATAVAWHPVHEGLFASGGSDGSL-LFWHVGVEKEVGGMEMAHEGMIWSLAWH 385
Query: 327 PKNETILASCCLGRRLMVWDLSR 349
P IL S W +R
Sbjct: 386 PLGH-ILCSGSNDHTSKFWTRNR 407
>MGI|MGI:1345966 [details] [associations]
symbol:Coro2a "coronin, actin binding protein 2A"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=ISA] [GO:0015629 "actin cytoskeleton" evidence=IBA]
[GO:0017053 "transcriptional repressor complex" evidence=ISO;IBA]
[GO:0030036 "actin cytoskeleton organization" evidence=IBA]
[GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1345966 GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629
eggNOG:COG2319 GO:GO:0051015 GeneTree:ENSGT00550000074317
HOGENOM:HOG000166356 HOVERGEN:HBG059978 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:7464 OrthoDB:EOG4GXFMG ChiTaRS:CORO2A
EMBL:AK030097 EMBL:AK054394 EMBL:AK152490 EMBL:AK153134
IPI:IPI00309623 RefSeq:NP_001158276.1 RefSeq:NP_849224.2
UniGene:Mm.416311 UniGene:Mm.485361 ProteinModelPortal:Q8C0P5
SMR:Q8C0P5 DIP:DIP-59203N STRING:Q8C0P5 PhosphoSite:Q8C0P5
PaxDb:Q8C0P5 PRIDE:Q8C0P5 Ensembl:ENSMUST00000030021
Ensembl:ENSMUST00000107756 GeneID:107684 KEGG:mmu:107684
InParanoid:Q8C0P5 NextBio:359244 Bgee:Q8C0P5 CleanEx:MM_CORO2A
Genevestigator:Q8C0P5 GermOnline:ENSMUSG00000028337 Uniprot:Q8C0P5
Length = 524
Score = 167 (63.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 52/199 (26%), Positives = 93/199 (46%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVA 234
GH + W+ F + + S S+DA I +W+I ++L + + H V V
Sbjct: 80 GHRGNVLDIKWNPFNDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKELIGHARRVGLVE 139
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
WH + S G D +++W+L T ++ PV+++ HQ + ++FN N +LAT
Sbjct: 140 WHPTTANILFSAGYDYKVMVWNLDTKDSVIAGPVKTINCHQDVILSMSFNT-NGSLLATT 198
Query: 293 STDKTVKLFDLRKISTALH--TFDSHK-EEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
D+ +++ D R + L ++ H+ +V +G K + S R++ +WD
Sbjct: 199 CKDRKIRIVDPR-LGIVLQEASYKGHRANKVLFLGSLKKLLSTGTSRWNNRQMALWDQEN 257
Query: 350 IDEEQTPEDAEDGPPELLF 368
+ T ED DG +LF
Sbjct: 258 LSVPLTEEDL-DGSSGVLF 275
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 163 (62.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 68/300 (22%), Positives = 133/300 (44%)
Query: 114 GKVQIIQQIN-HDGEVNRARYMPQNPFLIAT-KTVSAEVYVFDYSKHPSKPPLDGACSPD 171
GK+ ++Q ++ H G V A + P++P L + + ++ D + G P
Sbjct: 2 GKLTLLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGT---------GRWVPK 52
Query: 172 LRLR-GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVV 230
L GH+ ++WS L S S DA + +WD ++ E + HE V
Sbjct: 53 TVLSDGHTRTIRDVAWSPCGR-FLASASFDATVAIWD----RRSGEFECNATLEGHENEV 107
Query: 231 EDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILA 290
+ V+W + L + D+ + IW++ + + H +V + ++P NE +LA
Sbjct: 108 KSVSWS-KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHP-NEDVLA 165
Query: 291 TGSTDKTVKLF--DLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+ S D T++L+ DL ++ T SH V+ + ++ LASC + + +W
Sbjct: 166 SASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSR-LASCSDDQTVRIWQE 224
Query: 348 SRIDEEQTPEDAEDGPPE---LLFIHGGHTSKISDFSWNPCEDW-VISSVAEDNILQIWQ 403
+ E + P + + G H+ + D SW C+ +I++ D++++I++
Sbjct: 225 YKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDISW--CKKTGLIATACGDDMVRIFR 282
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 55/251 (21%), Positives = 101/251 (40%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GH E +SWSK G LL+ S D + +W++ + E + H V+
Sbjct: 100 LEGHENEVKSVSWSK--SGALLATCSRDKSVWIWEV---AQEDEYECAAVLNTHSQDVKK 154
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
V WH + L + D+ L + S ++ +H S V +AF+ LA+
Sbjct: 155 VEWHPNEDVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSR-LASC 213
Query: 293 STDKTVKLFDLRK---------------ISTALHTFDS-HKEEVFQVGWNPKNETILASC 336
S D+TV+++ K + + T H V+ + W K I +C
Sbjct: 214 SDDQTVRIWQEYKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDISWCKKTGLIATAC 273
Query: 337 CLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396
G D+ RI E A + E++ H+ + W+P ++ + ++D
Sbjct: 274 --GD-----DMVRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSDD 326
Query: 397 NILQIWQMAEN 407
+++W+ ++
Sbjct: 327 GDVKLWKFEDD 337
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 56/218 (25%), Positives = 101/218 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH+ + + + ++ + S S DA I +W + P N S +Q+ + HE V +
Sbjct: 260 LKGHTKKVTSVVFHPSQD-LVFSASPDATIRIWSV---P-NAS--CVQVVRAHESAVTGL 312
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H +YL S DDQY D++T V V + S + C F+P + I TG+
Sbjct: 313 SLHATGDYLLSS-SDDQYWAFSDIQTGRVLTKVTDETSGCS-LTCAQFHP-DGLIFGTGT 369
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +K++DL++ T + F H + + ++ +N LA+ + +WDL ++
Sbjct: 370 MDSQIKIWDLKE-RTNVANFPGHSGPITSIAFS-ENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 354 QTPE-DAEDGPPELLFIHGGHTSKI--SDFSWNPCEDW 388
+T + D L+F G + +D C+ W
Sbjct: 428 KTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQW 465
>RGD|1309719 [details] [associations]
symbol:Coro2a "coronin, actin binding protein 2A" species:10116
"Rattus norvegicus" [GO:0017053 "transcriptional repressor complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1309719 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
CTD:7464 OMA:LLQMFYR OrthoDB:EOG4GXFMG IPI:IPI00367300
RefSeq:NP_001012101.2 GeneID:313235 KEGG:rno:313235 EMBL:BC079209
UniGene:Rn.198722 ProteinModelPortal:Q6AY36 UCSC:RGD:1309719
InParanoid:Q6AY36 NextBio:665870 ArrayExpress:Q6AY36
Genevestigator:Q6AY36 Uniprot:Q6AY36
Length = 524
Score = 166 (63.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 53/199 (26%), Positives = 93/199 (46%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVA 234
GH + W+ F + + S S+DA I +W+I ++L + + H V V
Sbjct: 80 GHRGNVLDIKWNPFDDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKELMGHARRVGLVE 139
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
WH + S G D +++W+L T +S PV+++ HQ + ++FN N +LAT
Sbjct: 140 WHPTTANILFSAGYDYKVMVWNLDTKDSVISGPVRTINCHQDVILSMSFNT-NGSLLATT 198
Query: 293 STDKTVKLFDLRKISTALH--TFDSHK-EEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
D+ +++ D R + L ++ H+ +V +G K + S R++ +WD
Sbjct: 199 CKDRKIRIVDPR-LGIVLQEASYKGHRANKVLFLGNLKKLLSTGTSRWNNRQMALWDQDN 257
Query: 350 IDEEQTPEDAEDGPPELLF 368
+ T ED DG +LF
Sbjct: 258 LSVPLTEEDL-DGSSGVLF 275
>UNIPROTKB|Q92828 [details] [associations]
symbol:CORO2A "Coronin-2A" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] [GO:0017053 "transcriptional
repressor complex" evidence=IDA] [GO:0035556 "intracellular signal
transduction" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 EMBL:CH471105
HOGENOM:HOG000166356 HOVERGEN:HBG059978 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:7464 OMA:LLQMFYR OrthoDB:EOG4GXFMG
EMBL:U57057 EMBL:U57058 EMBL:AL137073 EMBL:BC000010 EMBL:BC011690
IPI:IPI00023736 RefSeq:NP_003380.3 RefSeq:NP_438171.1
UniGene:Hs.113094 ProteinModelPortal:Q92828 SMR:Q92828
DIP:DIP-59202N IntAct:Q92828 STRING:Q92828 PhosphoSite:Q92828
DMDM:28381354 PaxDb:Q92828 PRIDE:Q92828 DNASU:7464
Ensembl:ENST00000343933 Ensembl:ENST00000375077 GeneID:7464
KEGG:hsa:7464 UCSC:uc004ayl.3 GeneCards:GC09M100883 HGNC:HGNC:2255
HPA:HPA041161 HPA:HPA041302 MIM:602159 neXtProt:NX_Q92828
PharmGKB:PA26771 InParanoid:Q92828 PhylomeDB:Q92828 ChiTaRS:CORO2A
GenomeRNAi:7464 NextBio:29230 Bgee:Q92828 CleanEx:HS_CORO2A
Genevestigator:Q92828 GermOnline:ENSG00000106789 Uniprot:Q92828
Length = 525
Score = 166 (63.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 56/209 (26%), Positives = 95/209 (45%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVA 234
GH + W+ F + + S S+DA I +W I ++L A + V H V V
Sbjct: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
WH + S G D ++IW+L T ++ P+ ++ HQ + ++FN N +LAT
Sbjct: 140 WHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNT-NGSLLATT 198
Query: 293 STDKTVKLFDLRKISTALH--TFDSHK-EEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
D+ +++ D R T L ++ H+ +V +G K + S R++ +WD
Sbjct: 199 CKDRKIRVIDPRA-GTVLQEASYKGHRASKVLFLGNLKKLMSTGTSRWNNRQVALWDQDN 257
Query: 350 IDEEQTPEDAEDGPPELLF-IHGGHTSKI 377
+ ED DG +LF + TS +
Sbjct: 258 LSVPLMEEDL-DGSSGVLFPFYDADTSML 285
>UNIPROTKB|F1LSP7 [details] [associations]
symbol:Coro2a "Coronin" species:10116 "Rattus norvegicus"
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309719 GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:7464
IPI:IPI00367300 RefSeq:NP_001012101.2 Ensembl:ENSRNOT00000011787
GeneID:313235 KEGG:rno:313235 ArrayExpress:F1LSP7 Uniprot:F1LSP7
Length = 543
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 53/199 (26%), Positives = 93/199 (46%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVA 234
GH + W+ F + + S S+DA I +W+I ++L + + H V V
Sbjct: 99 GHRGNVLDIKWNPFDDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKELMGHARRVGLVE 158
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
WH + S G D +++W+L T +S PV+++ HQ + ++FN N +LAT
Sbjct: 159 WHPTTANILFSAGYDYKVMVWNLDTKDSVISGPVRTINCHQDVILSMSFNT-NGSLLATT 217
Query: 293 STDKTVKLFDLRKISTALH--TFDSHK-EEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
D+ +++ D R + L ++ H+ +V +G K + S R++ +WD
Sbjct: 218 CKDRKIRIVDPR-LGIVLQEASYKGHRANKVLFLGNLKKLLSTGTSRWNNRQMALWDQDN 276
Query: 350 IDEEQTPEDAEDGPPELLF 368
+ T ED DG +LF
Sbjct: 277 LSVPLTEEDL-DGSSGVLF 294
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 166 (63.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 56/192 (29%), Positives = 88/192 (45%)
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
+ L GH++ + + +E +++GS I +WD+ AA K L + H+ +
Sbjct: 57 MSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWDLEAA---KILRTLM---GHKANIC 109
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
+ +H E++ S D + +WD+R V H V CL F+P +W LA+
Sbjct: 110 SLDFHPYGEFV-ASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKW-LAS 164
Query: 292 GSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
+ D TVKL+DL + F H V V ++P NE +LAS R + WDL +
Sbjct: 165 AADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQ 222
Query: 352 EEQTPEDAEDGP 363
E E GP
Sbjct: 223 VVSCIE-GEPGP 233
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 192 GHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LL+ G DD ++ LW IN SL H VE V + E +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTG------HTSPVESVRLNTPEELIVAG-SQSG 85
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+ +WDL +K +++++ H++ + L F+P+ E++ A+GS D +KL+D+R+ +
Sbjct: 86 SIRVWDLEA---AKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCV 140
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ H + V + ++P + LAS + +WDL+ + + GP ++ H
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
>MGI|MGI:2442115 [details] [associations]
symbol:Wdr59 "WD repeat domain 59" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
MGI:MGI:2442115 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00650000093352
OMA:TGGWNIA CTD:79726 HOVERGEN:HBG092820 EMBL:EF011622
EMBL:AK173301 EMBL:AK030644 EMBL:AK040807 EMBL:AK052262
EMBL:AK136303 EMBL:AK170910 EMBL:BC066082 IPI:IPI00263940
IPI:IPI00469939 IPI:IPI00955111 RefSeq:NP_001164213.1
RefSeq:NP_001164214.1 RefSeq:NP_795897.2 UniGene:Mm.247294
ProteinModelPortal:Q8C0M0 SMR:Q8C0M0 PhosphoSite:Q8C0M0
PRIDE:Q8C0M0 Ensembl:ENSMUST00000038193 GeneID:319481
KEGG:mmu:319481 UCSC:uc009nmi.2 UCSC:uc009nmj.2 NextBio:394820
Bgee:Q8C0M0 CleanEx:MM_WDR59 Genevestigator:Q8C0M0 Uniprot:Q8C0M0
Length = 992
Score = 169 (64.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 66/247 (26%), Positives = 116/247 (46%)
Query: 165 DGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIF 223
DG+ L+GH+ L W+ F+ L++ S D I +WDI K +L A+
Sbjct: 92 DGSGEVGTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVA-- 149
Query: 224 KVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
G + V W+ ++ YL S D + IWD R PS + V+ + AH S+++ L ++
Sbjct: 150 ----GASQ-VKWNKKNANYLATSHDGD--VRIWDKRKPSTA--VEYLAAHLSKIHGLDWH 200
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P +E I AT S D +VK +D R+ L+ + V++ + P + ++ +
Sbjct: 201 PDSEHIFATSSQDNSVKFWDYRQPRKYLNILPC-QVPVWKARYTPFSNGLVT-------V 252
Query: 343 MVWDLSRIDEEQTPEDAED-GPPELLFIHGGHTSKISDFSWNP----CEDWVISSVAEDN 397
MV L R + +A D P F+ GH + +F W +D+ + + + D
Sbjct: 253 MVPQLRR-ENSLLLWNASDLNAPVHTFV--GHDDVVLEFQWRRQKEGSKDYQLVTWSRDQ 309
Query: 398 ILQIWQM 404
L++W++
Sbjct: 310 TLRMWRV 316
Score = 144 (55.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 44/164 (26%), Positives = 74/164 (45%)
Query: 184 LSWSKFKE-GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYL 242
+ W+ H + S + ++ L+ K+ S E + H V+ D+ W + L
Sbjct: 65 VQWNPHDSFAHYFAASSNQRVDLYKW----KDGSGEVGTTLQGHTRVISDLDWAVFEPDL 120
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+ D Y+ IWD++ S VA S+V +N N LAT S D V+++D
Sbjct: 121 LVTSSVDTYIYIWDIKDTRKPTVALSAVAGASQVK---WNKKNANYLAT-SHDGDVRIWD 176
Query: 303 LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
RK STA+ +H ++ + W+P +E I A+ + WD
Sbjct: 177 KRKPSTAVEYLAAHLSKIHGLDWHPDSEHIFATSSQDNSVKFWD 220
Score = 134 (52.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 57/272 (20%), Positives = 106/272 (38%)
Query: 101 DDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPS 160
+ R D + +G+V Q H ++ + P L+ T +V +Y++D K
Sbjct: 82 NQRVDLYKWKDGSGEVGTTLQ-GHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDI-KDTR 139
Query: 161 KPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM 220
KP + A S + G S + W+K K + L+ S D + +WD K K A+
Sbjct: 140 KPTV--ALSA---VAGASQ----VKWNK-KNANYLATSHDGDVRIWD-----KRKPSTAV 184
Query: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280
+ H + + WH E++F + D + WD R P + +
Sbjct: 185 EYLAAHLSKIHGLDWHPDSEHIFATSSQDNSVKFWDYRQPRKYLNILPCQVPVWKARYTP 244
Query: 281 F-NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETI----LAS 335
F N ++ + ++ L++ ++ +HTF H + V + W + E L +
Sbjct: 245 FSNGLVTVMVPQLRRENSLLLWNASDLNAPVHTFVGHDDVVLEFQWRRQKEGSKDYQLVT 304
Query: 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELL 367
+ L +W + + D DG E +
Sbjct: 305 WSRDQTLRMWRVDYQMQRLCANDILDGVDEFI 336
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 370 HGGHTSKISDF 380
HGGHTS + ++
Sbjct: 961 HGGHTSHMMEW 971
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 165 (63.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 48/182 (26%), Positives = 80/182 (43%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K +LS D +WD + EA Q F H DV W
Sbjct: 261 HKGPIFALKWNK-KGNFILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDWQ 313
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
+ F S D + + L +P+++ H +EVN + ++P +LA+ S D
Sbjct: 314 SNNT--FASCSTDMCIHVCKL---GQERPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDM 367
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILA-SCCLGRRLMVWDL 347
T+KL+ +++ T +H +H +E++ + W NP +LA S + +WD
Sbjct: 368 TLKLWSMKQ-DTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDA 426
Query: 348 SR 349
R
Sbjct: 427 ER 428
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 59/248 (23%), Positives = 108/248 (43%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-- 231
LRGH +E + +W+ + L SGS D+ +W+++ + S + + + EG +
Sbjct: 161 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVP 219
Query: 232 ---DVA---WHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
DV W+ L GS D + IW + +++ + H+ + L +N
Sbjct: 220 SNKDVTSLDWNSEGTLLATGSY--DGFARIWT-KDGNLASTLGQ---HKGPIFALKWNKK 273
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
+IL+ G DKT ++D A F H V W N ASC M
Sbjct: 274 GNFILSAG-VDKTTIIWDAHT-GEAKQQFPFHSAPALDVDWQSNNT--FASCSTD---MC 326
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
+ ++ +E+ P F GHT++++ W+P + +++S ++D L++W M
Sbjct: 327 IHVCKLGQER---------PIKTF--QGHTNEVNAIKWDPTGN-LLASCSDDMTLKLWSM 374
Query: 405 AENI-YHD 411
++ HD
Sbjct: 375 KQDTCVHD 382
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 149 (57.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 192 GHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LL+ G DD ++ LW IN SL H VE V + E +
Sbjct: 37 GRLLATGGDDCRVNLWSINKPNCIMSLTG------HTSPVESVRLNTPEELIVAG-SQSG 89
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+ +WDL +K +++++ H++ + L F+P+ E++ A+GS D +KL+D+R+ +
Sbjct: 90 SIRVWDLEA---AKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCV 144
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ H + V + ++P + LAS + +WDL+ + + GP ++ H
Sbjct: 145 FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 202
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 161 (61.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 60/212 (28%), Positives = 99/212 (46%)
Query: 187 SKFK-EGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244
+KF +G L+ S S+D I +WD NK + + F G V ++ +
Sbjct: 20 AKFSPDGRLIVSCSEDKTIKIWDTT----NK--QCVNNFSDSVGFANFVDFNPSGTCI-A 72
Query: 245 SVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
S G DQ + +WD+R V+K +Q H VNC++F+P +++ T S+D T+K+ DL
Sbjct: 73 SAGSDQTVKVWDVR---VNKLLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILDLL 128
Query: 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ----TPEDAE 360
+ ++T H VF V ++ E + AS ++++W + DE T + +
Sbjct: 129 E-GRLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWR-TNFDELHCKGLTKRNLK 185
Query: 361 ----DGPPELLFIHGG----HTSKISDFSWNP 384
D PP LL I+ H K+ NP
Sbjct: 186 RLHFDSPPHLLDIYPRTPHPHEEKVETVEINP 217
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 169 (64.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 60/248 (24%), Positives = 115/248 (46%)
Query: 183 GLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYL 242
GLS+ K +L+ I LWD + F HEG V V +H + L
Sbjct: 14 GLSFHP-KRPWILASLHSGVIQLWDYRMGT------LIDRFDEHEGPVRGVHFH-NSQPL 65
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
F S GDD + +W+ +T + + +++ H + + F+ N WI++ S D+T+++++
Sbjct: 66 FVSGGDDYKIKVWNYKT---HRCLFTLLGHLDYIRTVQFHHENPWIVSA-SDDQTIRIWN 121
Query: 303 LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ-TPEDA-- 359
+ T + H V ++PK E ++ S L + + VWD+ + ++ +P D
Sbjct: 122 WQS-RTCISVLTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLM 179
Query: 360 ------ED--GPPELL--FIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409
D G + + ++ GH ++ S++P ++S A+D +++W+M E
Sbjct: 180 RFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSG-ADDRQVKLWRMNETKA 238
Query: 410 HDEDDLPG 417
+ D L G
Sbjct: 239 WEVDTLRG 246
>UNIPROTKB|F1RG37 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 GeneTree:ENSGT00650000093352
EMBL:FP016225 RefSeq:XP_003124754.1 Ensembl:ENSSSCT00000008775
GeneID:100510897 KEGG:ssc:100510897 Uniprot:F1RG37
Length = 790
Score = 174 (66.3 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 49/175 (28%), Positives = 81/175 (46%)
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILAT 291
DV WH E L + + ++ W+L PS +K Q H+ VN + F+P +L +
Sbjct: 79 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 292 GSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
GS D +K FDLR+ ++ TF E V V ++ ++ AS + +WD+ R D
Sbjct: 139 GSQDGFMKCFDLRR-KDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPD 197
Query: 352 EEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED--WVISSVAEDNILQIWQM 404
+ A +GP +F W+P ED W+ + D ++++W M
Sbjct: 198 RCERMFTAHNGP---VFC----------CDWHP-EDRGWLATG-GRDKMVKVWDM 237
Score = 156 (60.0 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 47/163 (28%), Positives = 79/163 (48%)
Query: 191 EGH-LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
E H LLSGS D + +D+ + K +++ F V DV + +R + F S ++
Sbjct: 132 EAHVLLSGSQDGFMKCFDL----RRK--DSVSTFSGQSESVRDVQFSIRDYFTFASTFEN 185
Query: 250 QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI-ST 308
+ +WD+R P + + AH V C ++P + LATG DK VK++D+ +
Sbjct: 186 GNVQLWDIRRPDRCE--RMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAK 243
Query: 309 ALHTFDSHKEEVFQVGWNPKNETILASCCL--GRRLMVWDLSR 349
+H + V +V W P+ LA+C + + VWD+ R
Sbjct: 244 EVHCVQTIAS-VARVKWRPECRHHLATCSMMVDHNIYVWDVRR 285
Score = 139 (54.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 40/164 (24%), Positives = 76/164 (46%)
Query: 186 WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS 245
W + E L + + + + W++ +NK Q+F H+ V V +H ++ S
Sbjct: 82 WHQMDENLLATAATNGVVVTWNLGRPSRNKQ---DQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 246 VGDDQYLLIWDLRTPSVSKPVQSVVAHQSE-VNCLAFNPFNEWILATGSTDKTVKLFDLR 304
D ++ +DLR K S + QSE V + F+ + + A+ + V+L+D+R
Sbjct: 139 GSQDGFMKCFDLRR----KDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIR 194
Query: 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
+ F +H VF W+P++ LA+ + + VWD++
Sbjct: 195 RPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMT 238
Score = 37 (18.1 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 389 VISSVAEDNILQIWQMAENIYHDEDDLPG 417
V + + + Q W M IY +PG
Sbjct: 436 VARELGRNQVAQTWTMLRIIYCSPGLVPG 464
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 166 (63.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 46/181 (25%), Positives = 79/181 (43%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K ++LS D +WD + + Q F H DV W
Sbjct: 450 HKGPIFALKWNKCGN-YILSAGVDKTTIIWDASTG------QCTQQFAFHSAPALDVDWQ 502
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
F S DQ + + L V++P+++ H +EVN + + P + +LA+ S D
Sbjct: 503 TNQA--FASCSTDQRIHVCRL---GVNEPIKTFKGHTNEVNAIKWCPQGQ-LLASCSDDM 556
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLMVWDLS 348
T+K++ + + H +H +E++ + W NP ILAS + +WD+
Sbjct: 557 TLKIWSMNR-DRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVE 615
Query: 349 R 349
R
Sbjct: 616 R 616
Score = 139 (54.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 47/188 (25%), Positives = 76/188 (40%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
G C+ HS + W + S +C +N E ++ FK
Sbjct: 483 GQCTQQFAF--HSAPALDVDWQTNQAFASCSTDQRIHVCRLGVN--------EPIKTFKG 532
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAF---- 281
H V + W + + L S DD L IW + +Q AH E+ + +
Sbjct: 533 HTNEVNAIKWCPQGQ-LLASCSDDMTLKIWSMNRDRCCHDLQ---AHSKEIYTIKWSPTG 588
Query: 282 ----NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC 337
NP ILA+ S D TV+L+D+ + + +HT H E V+ V ++P + LAS
Sbjct: 589 PGTNNPNTNLILASASFDSTVRLWDVER-GSCIHTLTKHTEPVYSVAFSPDGKH-LASGS 646
Query: 338 LGRRLMVW 345
+ + +W
Sbjct: 647 FDKCVHIW 654
Score = 131 (51.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 42/179 (23%), Positives = 84/179 (46%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + + W+ Y+ S G D+ +IWD T + Q H + + + N
Sbjct: 450 HKGPIFALKWNKCGNYIL-SAGVDKTTIIWDASTGQCT---QQFAFHSAPALDVDWQT-N 504
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
+ A+ STD+ + + L ++ + TF H EV + W P+ + +LASC L +W
Sbjct: 505 Q-AFASCSTDQRIHVCRLG-VNEPIKTFKGHTNEVNAIKWCPQGQ-LLASCSDDMTLKIW 561
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
++R ++ D + E+ I T ++ NP + +++S + D+ +++W +
Sbjct: 562 SMNR---DRCCHDLQAHSKEIYTIKWSPTGPGTN---NPNTNLILASASFDSTVRLWDV 614
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 46/187 (24%), Positives = 81/187 (43%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEA--MQI 222
G P +GH+ E + W +G LL+ SDD + +W +N L+A +I
Sbjct: 522 GVNEPIKTFKGHTNEVNAIKWCP--QGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEI 579
Query: 223 FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFN 282
+ + + + S D + +WD+ S + ++ H V +AF+
Sbjct: 580 YTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSC---IHTLTKHTEPVYSVAFS 636
Query: 283 PFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
P + LA+GS DK V ++ + +H++ +F+V WN K + AS G +
Sbjct: 637 PDGKH-LASGSFDKCVHIWSTQT-GQLVHSYKG-TGGIFEVCWNSKGTKVGASASDGS-V 692
Query: 343 MVWDLSR 349
V DL +
Sbjct: 693 FVLDLRK 699
Score = 118 (46.6 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 57/220 (25%), Positives = 93/220 (42%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-- 231
LRGH +E + +W+ ++ L SGS D+ +WD++ A N + ++ + +G E
Sbjct: 351 LRGHESEVFICAWNPSRD-LLASGSGDSTARIWDMSDANTNSNQLVLR-HCIQKGGAEVP 408
Query: 232 ---DVA---WHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
DV W+ L GS D Y IW +T + ++ H+ + L +N
Sbjct: 409 SNKDVTSLDWNCDGSLLATGSY--DGYARIW--KTDG--RLASTLGQHKGPIFALKWNKC 462
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
+IL+ G DKT ++D F H V W N+ ASC +R+ V
Sbjct: 463 GNYILSAG-VDKTTIIWDA-STGQCTQQFAFHSAPALDVDWQT-NQAF-ASCSTDQRIHV 518
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP 384
L ++E P F GHT++++ W P
Sbjct: 519 CRLG-VNE-----------PIKTF--KGHTNEVNAIKWCP 544
Score = 69 (29.3 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQM-AENIYHD 411
GHT++++ W P + +++S ++D L+IW M + HD
Sbjct: 532 GHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSMNRDRCCHD 571
Score = 44 (20.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 132 RYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG--YG-LSWSK 188
RY+ ++ FL + YVF H S+ ++GA P L +G Y + WS
Sbjct: 14 RYLQESGFLHSA-------YVFGIESHISQSNINGALVPPAALLTILQKGLLYTEVEWSV 66
Query: 189 FKEGHL 194
++G +
Sbjct: 67 GEDGEV 72
>TAIR|locus:2117169 [details] [associations]
symbol:AT4G18900 "AT4G18900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00537780
RefSeq:NP_567565.1 UniGene:At.50695 ProteinModelPortal:F4JSB9
SMR:F4JSB9 PRIDE:F4JSB9 EnsemblPlants:AT4G18900.1 GeneID:827624
KEGG:ath:AT4G18900 OMA:GFDVRQA PhylomeDB:F4JSB9 Uniprot:F4JSB9
Length = 461
Score = 163 (62.4 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 56/179 (31%), Positives = 83/179 (46%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW- 235
H+ GL+W+K L S S D ++ +WD+ ++E H V+ VAW
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEH------HTKEVQAVAWN 285
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
H E L S DQ +++ D R PS S SV+ S+V LA++P +E D
Sbjct: 286 HYAPEVLL-SGSFDQTVVLKDGRQPSHSGFKWSVM---SDVESLAWDPHSEHSFVVSLED 341
Query: 296 KTVKLFDLRKISTALH------TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
TVK FD+R+ S + T + H E V +N +LA+ R + +WDLS
Sbjct: 342 GTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLS 400
Score = 152 (58.6 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 50/186 (26%), Positives = 87/186 (46%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
G C + + H+ E ++W+ + LLSGS D + L D P + + + V
Sbjct: 266 GTCK--ITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKD-GRQPSHSGFK----WSV 318
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS----KPVQSVVAHQSEVNCLAF 281
V E +AW E+ F +D + +D+R S+S P ++ H +++
Sbjct: 319 MSDV-ESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSY 377
Query: 282 NPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETILASCCLGR 340
N +LATGS D+TVKL+DL + + T + + +F + ++P N +LA +
Sbjct: 378 NISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMG 437
Query: 341 RLMVWD 346
L +WD
Sbjct: 438 ELKLWD 443
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 56/231 (24%), Positives = 103/231 (44%)
Query: 190 KEGHLLS-GSDDAQ-ICLWDINA----AP------KNKSLEAMQIFKVHEGVVEDVAWHL 237
+ G+ L+ GSD I +WD++A P +NK Q H V +AW+
Sbjct: 186 ERGNFLAVGSDGTPTIEIWDLDAWFDMLPCVQLGGQNKEGNYKQ--GSHTRSVLGLAWNK 243
Query: 238 RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKT 297
+ S D+ + +WD+ T + ++ H EV +A+N + +L +GS D+T
Sbjct: 244 EFRNILASASADKKVKVWDVATGTCKITMEH---HTKEVQAVAWNHYAPEVLLSGSFDQT 300
Query: 298 VKLFDLRKISTALHTFDSHKEEVFQVGWNPKNE-TILASCCLGRRLMVWDLSRIDEEQTP 356
V L D R+ S + + S +V + W+P +E + + S G + D Q
Sbjct: 301 VVLKDGRQPSHSGFKW-SVMSDVESLAWDPHSEHSFVVSLEDGT------VKGFDVRQAS 353
Query: 357 EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
A + P F GH + S+N ++++ ++D +++W ++ N
Sbjct: 354 ISASESNPS--FTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNN 402
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 159 (61.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 56/225 (24%), Positives = 95/225 (42%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
GH+ ++WS +L S S DA IC+W + K+ E M + HE V+ V W
Sbjct: 43 GHTRTIRSVAWSPCGN-YLASCSFDATICIW----SKKDGDFECMATLEGHENEVKCVNW 97
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVNCLAFNPFNEWILATGST 294
YL S D+ IW+ SV+ H +V + ++P E L + S
Sbjct: 98 SSSGVYL-ASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSP-KENALVSASY 155
Query: 295 DKTVKLF-DLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D T+K++ ++ HT H+ V+ + ++ E + SC + L +W +
Sbjct: 156 DNTIKIYKEVDDDWECSHTLIGHESTVWSLSFHSSGE-LFVSCGDDKVLKIWKCLK---- 210
Query: 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNI 398
P D + + I G H I D W+ + + ++ +D I
Sbjct: 211 SGPSDVKW--ISICTIAGYHNRPIYDVDWSKLNNKIATACGDDAI 253
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 58/245 (23%), Positives = 108/245 (44%)
Query: 174 LRGHSTEGYGLSWSKFKEG-HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GH E ++WS G +L S S D +W+ +++ E + H V+
Sbjct: 85 LEGHENEVKCVNWSS--SGVYLASCSRDKSAWIWEF--IEEDEEYECASVLTDHSQDVKH 140
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
V W + L S D + I+ + +++ H+S V L+F+ E ++ G
Sbjct: 141 VVWSPKENALV-SASYDNTIKIYK-EVDDDWECSHTLIGHESTVWSLSFHSSGELFVSCG 198
Query: 293 STDKTVKLF--------DLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
DK +K++ D++ IS H ++ V W+ N I A+ C + +
Sbjct: 199 D-DKVLKIWKCLKSGPSDVKWISICTIA-GYHNRPIYDVDWSKLNNKI-ATACGDDAIRI 255
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFI--HGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
+ + RI T + +LLFI + H ++ W+P D +++S ++DN ++IW
Sbjct: 256 FSIVRI----TISISN----QLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNCIKIW 307
Query: 403 QMAEN 407
++ N
Sbjct: 308 KVHSN 312
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 41/174 (23%), Positives = 79/174 (45%)
Query: 250 QYLLIWDLRTPSVSKPVQSVVA--HQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS 307
QY+ IW + S +S++ H + +A++P + LA+ S D T+ ++ +
Sbjct: 20 QYIRIWAKNSDSDQWTCKSILTEGHTRTIRSVAWSPCGNY-LASCSFDATICIWSKKDGD 78
Query: 308 -TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPEL 366
+ T + H+ EV V W+ LASC + +W+ DEE E
Sbjct: 79 FECMATLEGHENEVKCVNWSSSG-VYLASCSRDKSAWIWEFIEEDEEY----------EC 127
Query: 367 LFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGDES 420
+ H+ + W+P E+ ++S+ + DN ++I++ ++ + L G ES
Sbjct: 128 ASVLTDHSQDVKHVVWSPKENALVSA-SYDNTIKIYKEVDDDWECSHTLIGHES 180
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 149 (57.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 192 GHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LL+ G DD ++ LW IN SL H VE V + E +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTG------HTSPVESVRLNTPEELIVAG-SQSG 85
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+ +WDL +K +++++ H++ + L F+P+ E++ A+GS D +KL+D+R+ +
Sbjct: 86 SIRVWDLEA---AKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCV 140
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ H + V + ++P + LAS + +WDL+ + + GP ++ H
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
Score = 118 (46.6 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH L + + E + SGS D I LWDI + K + ++ H V +
Sbjct: 101 LMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI----RRKG--CVFRYRGHSQAVRCL 153
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ ++L S DD + +WDL + K + H VN + F+P NE++LA+GS
Sbjct: 154 RFSPDGKWL-ASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGS 208
Query: 294 TD 295
+D
Sbjct: 209 SD 210
>UNIPROTKB|Q6PJI9 [details] [associations]
symbol:WDR59 "WD repeat-containing protein 59" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50908
SMART:SM00320 SMART:SM00591 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:3.10.110.10 InterPro:IPR016135 OMA:TGGWNIA EMBL:AK022332
EMBL:AK091316 EMBL:AF370390 EMBL:BC004519 EMBL:BC014887
EMBL:AB067510 IPI:IPI00012257 IPI:IPI00242841 IPI:IPI00644331
IPI:IPI00646489 RefSeq:NP_085058.3 UniGene:Hs.280951
ProteinModelPortal:Q6PJI9 SMR:Q6PJI9 IntAct:Q6PJI9 STRING:Q6PJI9
PhosphoSite:Q6PJI9 DMDM:134035358 PaxDb:Q6PJI9 PRIDE:Q6PJI9
Ensembl:ENST00000262144 GeneID:79726 KEGG:hsa:79726 UCSC:uc002fdf.1
UCSC:uc002fdg.1 CTD:79726 GeneCards:GC16M074908 H-InvDB:HIX0013239
HGNC:HGNC:25706 HPA:HPA041084 neXtProt:NX_Q6PJI9
PharmGKB:PA142670593 HOGENOM:HOG000004834 HOVERGEN:HBG092820
InParanoid:Q6PJI9 OrthoDB:EOG4CNQQ9 GenomeRNAi:79726 NextBio:69094
Bgee:Q6PJI9 CleanEx:HS_WDR59 Genevestigator:Q6PJI9 Uniprot:Q6PJI9
Length = 974
Score = 167 (63.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 64/249 (25%), Positives = 116/249 (46%)
Query: 165 DGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIF 223
DG+ L+GH+ L W+ F+ L++ S D I +WDI K +L A+
Sbjct: 92 DGSGEVGTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVA-- 149
Query: 224 KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283
G + V W+ ++ + D + IWD R PS + V+ + AH S+++ L ++P
Sbjct: 150 ----GASQ-VKWNKKNANCLATSHDGD-VRIWDKRKPSTA--VEYLAAHLSKIHGLDWHP 201
Query: 284 FNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNP-KNETILASCCLGRR- 341
+E ILAT S D +VK +D R+ L+ + V++ + P N + RR
Sbjct: 202 DSEHILATSSQDNSVKFWDYRQPRKYLNILPC-QVPVWKARYTPFSNGLVTVMVPQLRRE 260
Query: 342 --LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNP----CEDWVISSVAE 395
L++W++ ++ TP F+ GH + +F W +D+ + + +
Sbjct: 261 NSLLLWNVFDLN---TPVHT--------FV--GHDDVVLEFQWRKQKEGSKDYQLVTWSR 307
Query: 396 DNILQIWQM 404
D L++W++
Sbjct: 308 DQTLRMWRV 316
Score = 148 (57.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 45/164 (27%), Positives = 75/164 (45%)
Query: 184 LSWSKFKE-GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYL 242
+ W+ H + S + ++ L+ K+ S E + H V+ D+ W + L
Sbjct: 65 VQWNPHDSFAHYFAASSNQRVDLYKW----KDGSGEVGTTLQGHTRVISDLDWAVFEPDL 120
Query: 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+ D Y+ IWD++ S VA S+V +N N LAT S D V+++D
Sbjct: 121 LVTSSVDTYIYIWDIKDTRKPTVALSAVAGASQVK---WNKKNANCLAT-SHDGDVRIWD 176
Query: 303 LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
RK STA+ +H ++ + W+P +E ILA+ + WD
Sbjct: 177 KRKPSTAVEYLAAHLSKIHGLDWHPDSEHILATSSQDNSVKFWD 220
Score = 135 (52.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 57/272 (20%), Positives = 107/272 (39%)
Query: 101 DDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPS 160
+ R D + +G+V Q H ++ + P L+ T +V +Y++D K
Sbjct: 82 NQRVDLYKWKDGSGEVGTTLQ-GHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDI-KDTR 139
Query: 161 KPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM 220
KP + A S + G S + W+K K + L+ S D + +WD K K A+
Sbjct: 140 KPTV--ALSA---VAGASQ----VKWNK-KNANCLATSHDGDVRIWD-----KRKPSTAV 184
Query: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLA 280
+ H + + WH E++ + D + WD R P + +
Sbjct: 185 EYLAAHLSKIHGLDWHPDSEHILATSSQDNSVKFWDYRQPRKYLNILPCQVPVWKARYTP 244
Query: 281 F-NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETI----LAS 335
F N ++ + ++ L+++ ++T +HTF H + V + W + E L +
Sbjct: 245 FSNGLVTVMVPQLRRENSLLLWNVFDLNTPVHTFVGHDDVVLEFQWRKQKEGSKDYQLVT 304
Query: 336 CCLGRRLMVWDLSRIDEEQTPEDAEDGPPELL 367
+ L +W + + D DG E +
Sbjct: 305 WSRDQTLRMWRVDSQMQRLCANDILDGVDEFI 336
Score = 39 (18.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 370 HGGHTSKISDF 380
HGGHTS + ++
Sbjct: 943 HGGHTSHMMEW 953
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 164 (62.8 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 61/242 (25%), Positives = 111/242 (45%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GHS + +S + LL+ + D+ + +WD +LE H V V
Sbjct: 334 LEGHSDLVRSVIFSH--DSRLLASASDSTVKIWDTGTGSLQHTLEG------HRDWVRSV 385
Query: 234 AWHLRHE-YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
+ H+ L S DD + IWD T S+ ++ H+ V + F+ ++ +LA+
Sbjct: 386 IFS--HDSQLLASASDDSTVKIWDTGTGSLQHTLEG---HRDWVRSVIFSHDSQ-LLASA 439
Query: 293 STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDE 352
S D TVK++D S HT + H++ V V ++ + +LAS R + +WD +
Sbjct: 440 SDDSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIFS-HDSRLLASASDDRTVRIWDTEKGSH 497
Query: 353 EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM-AENIYHD 411
+ T E GH+S ++ S++ + +++S + D ++IW + A ++ H
Sbjct: 498 KHTLE--------------GHSSLVTSVSFSH-DSRLLASASNDQTVRIWDIEARSLQHT 542
Query: 412 ED 413
D
Sbjct: 543 FD 544
Score = 158 (60.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 160 SKPPLDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSL 217
+KP + SP L+ L GH +S+S + LL S SDD + +WD +L
Sbjct: 277 TKPDVANHWSPCLQALEGHEAAVLSVSYSH--DSRLLASASDDRTVKIWDTETGSLQHTL 334
Query: 218 EAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVN 277
E H +V V + H+ + D + IWD T S+ ++ H+ V
Sbjct: 335 EG------HSDLVRSVIFS--HDSRLLASASDSTVKIWDTGTGSLQHTLEG---HRDWVR 383
Query: 278 CLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCC 337
+ F+ ++ +LA+ S D TVK++D S HT + H++ V V ++ ++ +LAS
Sbjct: 384 SVIFSHDSQ-LLASASDDSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIFSHDSQ-LLASAS 440
Query: 338 LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ +WD + T E D ++F H
Sbjct: 441 DDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH 473
>ZFIN|ZDB-GENE-040426-1202 [details] [associations]
symbol:coro6 "coronin 6" species:7955 "Danio
rerio" [GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036
"actin cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1202
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 EMBL:BC054129 IPI:IPI00504691
RefSeq:NP_956690.1 UniGene:Dr.12674 ProteinModelPortal:Q7SZ58
SMR:Q7SZ58 GeneID:393367 KEGG:dre:393367 NextBio:20814416
ArrayExpress:Q7SZ58 Uniprot:Q7SZ58
Length = 436
Score = 162 (62.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 41/155 (26%), Positives = 74/155 (47%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL--RTPS--VSKPVQSVVAHQSEVNCLAF 281
H G V D+ W ++ + S +D ++W + TPS +S+P+ + H V + +
Sbjct: 80 HSGPVLDIDWCPHNDNILASCSEDTTAMVWQIPDHTPSRPISEPIVVLEGHSKRVGIIKW 139
Query: 282 NPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341
+P IL T +D + ++++ AL T D H + ++ VGWN N ++ + C RR
Sbjct: 140 HPTARNILLTAGSDNLIIIWNVGT-GEALITMDDHPDLIYSVGWN-YNGSLFCTTCKDRR 197
Query: 342 LMVWDLSR---IDEEQTPEDAEDGPPELLFIHGGH 373
L V D + + E +P + P +F G+
Sbjct: 198 LRVCDPRKNEVVAERLSPHEGIR-PMRAIFTREGN 231
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 24/89 (26%), Positives = 40/89 (44%)
Query: 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTS 375
H V + W P N+ ILASC MVW + + TP P + + GH+
Sbjct: 80 HSGPVLDIDWCPHNDNILASCSEDTTAMVWQIP----DHTPSRPISEP---IVVLEGHSK 132
Query: 376 KISDFSWNPCEDWVISSVAEDNILQIWQM 404
++ W+P ++ + DN++ IW +
Sbjct: 133 RVGIIKWHPTARNILLTAGSDNLIIIWNV 161
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 168 (64.2 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 51/195 (26%), Positives = 90/195 (46%)
Query: 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199
+IAT + + V+D H + L+ C R +GHS + + L+++ + LLSGS
Sbjct: 164 IIATAVANGRIVVYDL--H--RTGLE-YC----RFQGHSRQVHRLAFNPHQPAWLLSGSQ 214
Query: 200 DAQICLWDINAAPKNKSLE---AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256
DA I +WD+ P ++ + + + + V DV W LF D + +WD
Sbjct: 215 DAHIRMWDLRTVPTDRGVSVCGSRDQYNSNSDAVRDVRWSPGDGVLFAVATDSGAIQLWD 274
Query: 257 LRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDL----RKISTALHT 312
+R S P+ + AH + ++P + I++ G TD+ VK+++ + L
Sbjct: 275 IRKSS--SPILRITAHDRPCYSVDWHPDGKHIVS-GGTDRQVKVWEFSITAERRQKPLFQ 331
Query: 313 FDSHKEEVFQVGWNP 327
F + + V V W P
Sbjct: 332 FRT-PQAVLNVRWRP 345
>ASPGD|ASPL0000062261 [details] [associations]
symbol:AN0310 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000006 HOGENOM:HOG000212580 KO:K14791
OMA:RGVAKET OrthoDB:EOG4DNJCV RefSeq:XP_657914.1
ProteinModelPortal:Q5BGM0 STRING:Q5BGM0
EnsemblFungi:CADANIAT00002402 GeneID:2876087 KEGG:ani:AN0310.2
Uniprot:Q5BGM0
Length = 535
Score = 157 (60.3 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 56/181 (30%), Positives = 82/181 (45%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H+ + L W + LL+GS D I D+ A P +K+ + + VE+V W
Sbjct: 307 HTDKVCSLDWHPKESTVLLTGSYDRTIVAADMRA-PDSKARWGV------DADVENVRWD 359
Query: 237 LRHEYLFGSVGDDQYLLIWDLR----TPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
+ F + D + +D+R TP SKPV S+ AH S V+ NP LATG
Sbjct: 360 IHDPNYFYATTDAGMVYRYDIRNVPATPKDSKPVWSLQAHDSSVSSFDINPAIPGFLATG 419
Query: 293 STDKTVKLFDLRKISTALHTFDSHKEEV---FQVGWNPKNETILASCCLGRR--LMVWDL 347
STDK VKL+++ ++ S K EV F + P E G + + +WD
Sbjct: 420 STDKQVKLWNVENDKPSMVV--SRKLEVGKVFSTTFAPDAEVGFRLAVAGSKGTVQIWDT 477
Query: 348 S 348
S
Sbjct: 478 S 478
Score = 137 (53.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 60/223 (26%), Positives = 98/223 (43%)
Query: 187 SKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSV 246
S + L G DA D K K ++A F V + V+ +A + +H L S
Sbjct: 230 SMYPNAILGQGGADADT---DAKKPRKKKKVKANDEFHV-DSVLA-LAANRQHRNLLASG 284
Query: 247 GDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKI 306
D+ + +WDL T +K +S H +V L ++P +L TGS D+T+ D+R
Sbjct: 285 SADRTVKLWDLNT---AKSAKSYTHHTDKVCSLDWHPKESTVLLTGSYDRTIVAADMRAP 341
Query: 307 -STALHTFDSHKEEVFQVGWNPKNETIL-ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPP 364
S A D+ +V V W+ + A+ G MV+ R D P +D P
Sbjct: 342 DSKARWGVDA---DVENVRWDIHDPNYFYATTDAG---MVY---RYDIRNVPATPKDSKP 392
Query: 365 ELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
++ H S +S F NP +++ + D +++W + EN
Sbjct: 393 --VWSLQAHDSSVSSFDINPAIPGFLATGSTDKQVKLWNV-EN 432
Score = 49 (22.3 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 83 AQVQLPLDD-SENDARHYDDDRSDFGG 108
A V++ DD E D HYD D D G
Sbjct: 78 APVKIDDDDLKEYDLEHYDSDEVDEDG 104
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 161 (61.7 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 43/156 (27%), Positives = 73/156 (46%)
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
P + L GHS + WS E + S S D I +WD+ +L ++F
Sbjct: 249 PIVTLSGHSEAVSSVLWSDVDE--ICSASWDHNIKIWDVETGTVKSTLAGNKVFNC---- 302
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWIL 289
+++ + L S D+++ +WD R+ S + S+ +H V + ++P +E L
Sbjct: 303 ---ISYSPLSQRL-ASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQL 358
Query: 290 ATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGW 325
+GS DK VKL+D R L+ +H ++V V W
Sbjct: 359 VSGSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDW 394
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H V V W E S D + IWD+ T +V +S +A NC++++P +
Sbjct: 256 HSEAVSSVLWSDVDEIC--SASWDHNIKIWDVETGTV----KSTLAGNKVFNCISYSPLS 309
Query: 286 EWILATGSTDKTVKLFDLRKI--STALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM 343
+ LA+GSTD+ ++L+D R S L + SH V V W+P +E L S L + +
Sbjct: 310 QR-LASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVK 368
Query: 344 VWD 346
+WD
Sbjct: 369 LWD 371
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 161 (61.7 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 56/228 (24%), Positives = 101/228 (44%)
Query: 184 LSWSKFKEGH----LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH 239
+ W +FK G L +G ++ +I +WD+ L M H +V D+ +
Sbjct: 130 IEWHRFKFGQDQLLLATGLNNGRIKIWDVYTG--KLLLNLMD----HTDIVRDLTFAPDG 183
Query: 240 EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVK 299
+ S D+ L +WDL+ V+ + HQ+ V C AF+P + + + G+ K V
Sbjct: 184 SLVLVSASRDKTLRVWDLKDDG--NMVKVLRGHQNWVYCSAFSPDSSVLCSVGA-GKAVF 240
Query: 300 LFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 359
L+D+ K T + + H +V ++P +LA+ R++VWD
Sbjct: 241 LWDMDKY-TLIRKLEGHHNDVVCCEFSPDG-ALLATASYDTRVIVWD-PHTATVLLELGH 297
Query: 360 EDGPPELLFIHGGHTSKISDFSWNPCEDWV-ISSVAEDNILQIWQMAE 406
PP +F G + + ++ C D I+SV +D +++ W + E
Sbjct: 298 LFPPPSPIFAGGANDRWVRSVAF--CHDGRHIASVTDDRLVRFWSIDE 343
Score = 116 (45.9 bits), Expect = 0.00077, P = 0.00077
Identities = 29/122 (23%), Positives = 61/122 (50%)
Query: 232 DVAWH---LRHEYLFGSVG-DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287
++ WH + L + G ++ + IWD+ T K + +++ H V L F P
Sbjct: 129 NIEWHRFKFGQDQLLLATGLNNGRIKIWDVYT---GKLLLNLMDHTDIVRDLTFAPDGSL 185
Query: 288 ILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+L + S DKT++++DL+ + H+ V+ ++P + ++L S G+ + +WD+
Sbjct: 186 VLVSASRDKTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSP-DSSVLCSVGAGKAVFLWDM 244
Query: 348 SR 349
+
Sbjct: 245 DK 246
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 161 (61.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 60/212 (28%), Positives = 99/212 (46%)
Query: 187 SKFK-EGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244
+KF +G L+ S S+D I +WD NK + + F G V ++ +
Sbjct: 108 AKFSPDGRLIVSCSEDKTIKIWDTT----NK--QCVNNFSDSVGFANFVDFNPSGTCI-A 160
Query: 245 SVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
S G DQ + +WD+R V+K +Q H VNC++F+P +++ T S+D T+K+ DL
Sbjct: 161 SAGSDQTVKVWDVR---VNKLLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILDLL 216
Query: 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ----TPEDAE 360
+ ++T H VF V ++ E + AS ++++W + DE T + +
Sbjct: 217 E-GRLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWR-TNFDELHCKGLTKRNLK 273
Query: 361 ----DGPPELLFIHGG----HTSKISDFSWNP 384
D PP LL I+ H K+ NP
Sbjct: 274 RLHFDSPPHLLDIYPRTPHPHEEKVETVEINP 305
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 158 (60.7 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 54/182 (29%), Positives = 86/182 (47%)
Query: 170 PDLR---LRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
P +R L GH + +S GHL+ SGS D +CLW P K E+ +FK
Sbjct: 51 PQMRAYCLVGHKDAVMCVQFSP--SGHLVASGSRDKTVCLW----VPSVKG-EST-VFKA 102
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H V V + + L + DD+ + +W + K + S+ H + V C F+P
Sbjct: 103 HTATVRSVHFSSDGQSLV-TASDDKTIKVWTVHR---QKFLFSLSQHINWVRCARFSPDG 158
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
++A+ S DKTVKL+D + +H+F H V ++P T +A+ + + VW
Sbjct: 159 R-LIASASDDKTVKLWD-KTSRECIHSFCEHGGFANHVEFHPSG-TCIAAAGTDKTVKVW 215
Query: 346 DL 347
D+
Sbjct: 216 DV 217
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/167 (27%), Positives = 81/167 (48%)
Query: 184 LSW---SKFK-EGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR 238
++W ++F +G L+ S SDD + LWD S E + F H G V +H
Sbjct: 146 INWVRCARFSPDGRLIASASDDKTVKLWD------KTSRECIHSFCEHGGFANHVEFHPS 199
Query: 239 HEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTV 298
+ + G D+ + +WD+R +++ +Q H + VN L+F+P +++ T S D T+
Sbjct: 200 GTCI-AAAGTDKTVKVWDVR---MNRLLQHYQVHTAAVNSLSFHPSGNYLI-TASNDSTL 254
Query: 299 KLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
K+ DL + L+T H+ V ++ + AS ++MVW
Sbjct: 255 KILDLLE-GRLLYTLHGHQGPATCVAFSRTGD-FFASGGSDEQVMVW 299
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 158 (60.7 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 54/225 (24%), Positives = 97/225 (43%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
GH ++WS +L S S DA C+W KN E + + + HE V+ VAW
Sbjct: 59 GHQRAVRKVAWSPCGN-YLASASFDATTCIWK----KKNDDFECLTVLEGHENEVKCVAW 113
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
L + D+ + IW++ + V V +H +V + ++P E +LA+ S D
Sbjct: 114 APSGNQL-ATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQE-LLASCSYD 171
Query: 296 KTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354
V ++ T + H V+ + ++P + LASC R + +W +E
Sbjct: 172 NNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQR-LASCSDDRTVKIW------KEC 224
Query: 355 TPEDAEDGPPELLF-IHGGHTSKISDFSWNPCEDWVISSVAEDNI 398
P +D + + + G H + D +W P + ++ +D +
Sbjct: 225 QPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGV 269
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 49/207 (23%), Positives = 89/207 (42%)
Query: 216 SLEAMQIFKVH-EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274
+L +Q F H + VAW+ + L S G D+ + IW S HQ
Sbjct: 4 TLALLQKFNAHPDSRCWYVAWNPKGT-LLASCGGDRAIRIWGREGDSWECKTVLQDGHQR 62
Query: 275 EVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNETIL 333
V +A++P + LA+ S D T ++ + L + H+ EV V W P L
Sbjct: 63 AVRKVAWSPCGNY-LASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQ-L 120
Query: 334 ASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSV 393
A+C + + +W+ +DEE E + + HT + W+P ++ +++S
Sbjct: 121 ATCSRDKSVWIWE---VDEEDEYE--------CVSVVNSHTQDVKHVVWHPTQE-LLASC 168
Query: 394 AEDNILQIWQMAENIYHDEDDLPGDES 420
+ DN + +++ ++ + L G S
Sbjct: 169 SYDNNVCVYKEEDDDWECRATLEGHTS 195
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 56/247 (22%), Positives = 99/247 (40%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH E ++W+ L + S D + +W+++ + E + + H V+ V
Sbjct: 101 LEGHENEVKCVAWAP-SGNQLATCSRDKSVWIWEVD---EEDEYECVSVVNSHTQDVKHV 156
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
WH E L S D + ++ ++ H S V L F+P + LA+ S
Sbjct: 157 VWHPTQE-LLASCSYDNNVCVYKEEDDDWECRA-TLEGHTSTVWGLTFDPSGQR-LASCS 213
Query: 294 TDKTVKLF---------DLR-KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM 343
D+TVK++ D K L F H V+ + W P + +C G
Sbjct: 214 DDRTVKIWKECQPGGGQDTAWKCVCTLSGF--HGRTVYDIAWCPLTGALATAC--GD--- 266
Query: 344 VWDLSRIDEEQTPEDAEDGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAEDNILQI 401
D R+ +E D D P L H H+ ++ +W+P E ++ S +++ + +
Sbjct: 267 --DGVRVFKEDETADP-DQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGEIAV 323
Query: 402 WQMAENI 408
W +
Sbjct: 324 WNYQSEV 330
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 158 (60.7 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 54/228 (23%), Positives = 98/228 (42%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
GH ++WS +L S S DA C+W KN E + + + HE V+ VAW
Sbjct: 59 GHQRTVRKVAWSPCGN-YLASASFDATTCIWK----KKNDDFECLTVLEGHENEVKCVAW 113
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
L + D+ + IW++ + + V V +H +V + ++P E +LA+ S D
Sbjct: 114 APSGN-LLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQE-LLASCSYD 171
Query: 296 KTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354
V ++ T + H V+ + ++P + LASC + +W +E
Sbjct: 172 NNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQR-LASCSDDCTVKIW------KEC 224
Query: 355 TPEDAEDGPPE----LLFIHGGHTSKISDFSWNPCEDWVISSVAEDNI 398
PE ++G + + G H + D +W P + ++ +D +
Sbjct: 225 QPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGV 272
Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 214 NKSLEAMQIFKVH-EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272
N +L +Q F H + VAW+ + L S G D+ + IW S H
Sbjct: 2 NDTLALLQKFNAHPDSRCWYVAWNPKGT-LLASCGGDRTIRIWGREGDSWECKTVLQDGH 60
Query: 273 QSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKIS-TALHTFDSHKEEVFQVGWNPKNET 331
Q V +A++P + LA+ S D T ++ + L + H+ EV V W P
Sbjct: 61 QRTVRKVAWSPCGNY-LASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGN- 118
Query: 332 ILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIS 391
+LA+C + + +W+ +DEE E + + HT + W+P ++ +++
Sbjct: 119 LLATCSRDKSVWIWE---VDEENEYE--------CVSVVNSHTQDVKHVVWHPTQE-LLA 166
Query: 392 SVAEDNILQIWQMAENIYHDEDDLPGDES 420
S + DN + +++ ++ + L G S
Sbjct: 167 SCSYDNNVCVYKEEDDDWECRATLEGHTS 195
Score = 126 (49.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 56/249 (22%), Positives = 100/249 (40%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GH E ++W+ G+LL+ S D + +W+++ + E + + H V+
Sbjct: 101 LEGHENEVKCVAWAP--SGNLLATCSRDKSVWIWEVD---EENEYECVSVVNSHTQDVKH 155
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATG 292
V WH E L S D + ++ ++ H S V L F+P + LA+
Sbjct: 156 VVWHPTQE-LLASCSYDNNVCVYKEEDDDWECRA-TLEGHTSTVWGLTFDPSGQR-LASC 212
Query: 293 STDKTVKLFDLRKISTALHTFDS-----------HKEEVFQVGWNPKNETILASCCLGRR 341
S D TVK++ + D+ H V+ + W P + +C G
Sbjct: 213 SDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGALATAC--GD- 269
Query: 342 LMVWDLSRIDEEQTPEDAEDGPPELLFIH--GGHTSKISDFSWNPCEDWVISSVAEDNIL 399
D R+ +E D D P L H HT ++ +W+P E ++ S +++ +
Sbjct: 270 ----DGVRVFKEDETADP-DQPAFSLSAHVPKAHTQDVNCIAWHPKEAGLLVSCSDNGEI 324
Query: 400 QIWQMAENI 408
+W +
Sbjct: 325 AVWNYQSGV 333
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 161 (61.7 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 60/212 (28%), Positives = 99/212 (46%)
Query: 187 SKFK-EGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244
+KF +G L+ S S+D I +WD NK + + F G V ++ +
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTT----NK--QCVNNFSDSVGFANFVDFNPSGTCI-A 202
Query: 245 SVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
S G DQ + +WD+R V+K +Q H VNC++F+P +++ T S+D T+K+ DL
Sbjct: 203 SAGSDQTVKVWDVR---VNKLLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILDLL 258
Query: 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ----TPEDAE 360
+ ++T H VF V ++ E + AS ++++W + DE T + +
Sbjct: 259 E-GRLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWR-TNFDELHCKGLTKRNLK 315
Query: 361 ----DGPPELLFIHGG----HTSKISDFSWNP 384
D PP LL I+ H K+ NP
Sbjct: 316 RLHFDSPPHLLDIYPRTPHPHEEKVETVEINP 347
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 49/173 (28%), Positives = 88/173 (50%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
GHS YG S+S + +LLS S+D LW + +++ + +K H V DV++
Sbjct: 677 GHSGPVYGCSFSPDSQ-YLLSCSEDTTARLWSM------ETMSNLVCYKGHNFPVWDVSF 729
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTD 295
+ F + D+ +W T +S P++ H S+ N + F+P N LATGS D
Sbjct: 730 S-PFGFYFATASHDRTARLWT--TNHIS-PLRIFTGHLSDCNTVRFHP-NINYLATGSND 784
Query: 296 KTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
K+ +L++++ + F H+ ++ V ++P +LA+ +++WDLS
Sbjct: 785 KSARLWEIQT-GKCVRIFMGHRAPIYTVAFSPDGR-LLATAGEDTSVILWDLS 835
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 38/121 (31%), Positives = 64/121 (52%)
Query: 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L +GS+D LW+I + ++IF H + VA+ L + G+D +
Sbjct: 777 YLATGSNDKSARLWEIQTG------KCVRIFMGHRAPIYTVAFSPDGR-LLATAGEDTSV 829
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRK-ISTALH 311
++WDL T K V+ + H V L F+ ILA+GS+D TV+L+D++K +++L
Sbjct: 830 ILWDLST---GKKVKKMDGHTKCVYSLDFSCDGS-ILASGSSDCTVRLWDVKKAFNSSLS 885
Query: 312 T 312
T
Sbjct: 886 T 886
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 161 (61.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 62/256 (24%), Positives = 115/256 (44%)
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
L+WS + LS SDD + ++D A + L H V+ WH L
Sbjct: 161 LAWSP-SDTKFLSASDDTTLKIYDFTARTCDTVLTG------HNWDVKSCDWHPTKGLLV 213
Query: 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDL 303
D Q + WD RT ++ + ++ +H++ V F+ N +LAT S D+T ++FDL
Sbjct: 214 SGSKDHQ-VKFWDPRT---ARCLTTLHSHKNTVTATKFSRVNNNLLATSSRDQTARVFDL 269
Query: 304 RKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW--DLSRIDEEQTPE---- 357
R + + H++ + + W+P + +++++ L + D + Q P
Sbjct: 270 RMMRD-ICILRGHEKPISTLTWHPVHCSLISTGSEDGSLYHYLLDEPNLPAGQIPTVAPY 328
Query: 358 DAEDG---PPELLF----IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA---EN 407
D+ D P ++++ I H + I W+P +++S ++DN + W A E
Sbjct: 329 DSPDPANTPAQVIYPAHRIQYAHAATIWTLDWHPLGH-ILASGSKDNFTRFWSRARPGET 387
Query: 408 IYHDEDDLPGDESAKA 423
Y + G+E+A+A
Sbjct: 388 SYLKDRFHIGEEAAEA 403
Score = 44 (20.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 98 HYDDDRSDFGGFGCANGKVQ 117
+YDD +D FG A G +Q
Sbjct: 3 YYDDGGNDSQPFGRAQGGIQ 22
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 134 (52.2 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 46/154 (29%), Positives = 72/154 (46%)
Query: 258 RTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK 317
R V++ Q++ H V C++F+P + LA+GS D TV+L+DL T L T HK
Sbjct: 94 RIRPVNRCSQTIAGHAEAVLCVSFSPDGKQ-LASGSGDTTVRLWDLYT-ETPLFTCKGHK 151
Query: 318 EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE-DGPPELLFIHGGHTSK 376
V V W+P + +++ G + W+ P+ E +G P GH
Sbjct: 152 NWVLTVAWSPDGKHLVSGSKSGE-ICCWN---------PKKGELEGSPLT-----GHKKW 196
Query: 377 ISDFSW------NPCEDWVISSVAEDNILQIWQM 404
I+ SW +PC +V SS +D +IW +
Sbjct: 197 ITGISWEPVHLSSPCRRFVTSS--KDGDARIWDI 228
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/139 (27%), Positives = 65/139 (46%)
Query: 169 SPDLRLRGHSTEGYGLSWSKFKEG-HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE 227
+P +GH ++WS +G HL+SGS +IC W+ PK LE + H+
Sbjct: 142 TPLFTCKGHKNWVLTVAWSP--DGKHLVSGSKSGEICCWN----PKKGELEGSPLTG-HK 194
Query: 228 GVVEDVAW---HLRHEYL-FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP 283
+ ++W HL F + D IWD+ ++ K + + H V C+ +
Sbjct: 195 KWITGISWEPVHLSSPCRRFVTSSKDGDARIWDI---TLKKSIICLSGHTLAVTCVKWG- 250
Query: 284 FNEWILATGSTDKTVKLFD 302
+ I+ TGS D T+K+++
Sbjct: 251 -GDGIIYTGSQDCTIKMWE 268
Score = 88 (36.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/116 (25%), Positives = 57/116 (49%)
Query: 289 LATGSTDKTVKLFDLRKISTALHT-FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+A+ S DK+V+L++ I+ T F H V+QV W+ + +L+ L +W++
Sbjct: 375 IASASFDKSVRLWN--GITGQFVTVFRGHVGPVYQVSWSADSRLLLSGS-KDSTLKIWEI 431
Query: 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
+T + +D P GH ++ W+P + V+S +D +L++W+
Sbjct: 432 ------RTKKLKQDLP--------GHADEVFAVDWSPDGEKVVSG-GKDRVLKLWK 472
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/188 (28%), Positives = 93/188 (49%)
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVV 230
++ GH + Y L +++ +G + SGS D + LWDI +N + A+ +F + +GV
Sbjct: 382 IQFAGHEQDIYSLDFAR--DGRTIASGSGDRTVRLWDI----ENGT--ALTVFTIEDGVT 433
Query: 231 EDVAWHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWIL 289
VA +Y+ GS+ D+ + +WDL + ++ H+ V +AF+P N L
Sbjct: 434 T-VAISPDTKYVAAGSL--DKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSP-NGRDL 489
Query: 290 ATGSTDKTVKLFDLR-----------KISTALHTFDSHKEEVFQVGWNPKNETILASCCL 338
TGS DKT+KL++L K + TF+ H++ V V P N+ +++
Sbjct: 490 VTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGS-K 548
Query: 339 GRRLMVWD 346
R + WD
Sbjct: 549 DRGVQFWD 556
Score = 154 (59.3 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 69/319 (21%), Positives = 134/319 (42%)
Query: 91 DSENDARHYDDDRSDFGG-FGCANGKV---QIIQQINHDGEVNRARYMPQNPFLIATKTV 146
D E H+ R D+ F A +V ++ + H+ V R+ ++
Sbjct: 261 DIERIPSHFKKSRDDWWAIFNQAVPRVLDVDLVHTLQHESVVCCVRFSADGKYVATGCNR 320
Query: 147 SAEVYVFDYSKHPSKPPLDGA-CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205
SA+++ + + D A + DL +R G K+ L +G++D QI +
Sbjct: 321 SAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDG----KY----LATGAEDKQIRV 372
Query: 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKP 265
WDI +++ F HE + + + R S D+ + +WD+ +
Sbjct: 373 WDITT----RTIRIQ--FAGHEQDIYSLDF-ARDGRTIASGSGDRTVRLWDIENGTAL-- 423
Query: 266 VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA--LHTFDSHKEEVFQV 323
+V + V +A +P +++ A GS DK+V+++DL + L D HK+ V+ V
Sbjct: 424 --TVFTIEDGVTTVAISPDTKYV-AAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSV 480
Query: 324 GWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWN 383
++P ++ L + + +W+L+ + ++ G F GH + +
Sbjct: 481 AFSPNGRDLVTGS-LDKTIKLWELATPRGNMQNQGSKGGRCVKTF--EGHRDFVLSVALT 537
Query: 384 PCEDWVISSVAEDNILQIW 402
P WV+S ++D +Q W
Sbjct: 538 PDNQWVMSG-SKDRGVQFW 555
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR-HEYLFGSVGDDQY 251
++ +GS D + +WD+ + LE H+ V VA+ + + GS+ D+
Sbjct: 443 YVAAGSLDKSVRVWDLTQGCPVERLEGPD---GHKDSVYSVAFSPNGRDLVTGSL--DKT 497
Query: 252 LLIWDLRTP------SVSKP---VQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFD 302
+ +W+L TP SK V++ H+ V +A P N+W+++ GS D+ V+ +D
Sbjct: 498 IKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMS-GSKDRGVQFWD 556
Query: 303 LRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRID 351
R ST L HK V V +P A+ R +W +R+D
Sbjct: 557 PRTGSTQL-MLQGHKNSVISVAPSPTGG-FFATGSGDMRARIWSYTRMD 603
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/189 (24%), Positives = 91/189 (48%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + VAWH + +F S G+D+ + IW L + S H+ + + ++P
Sbjct: 13 HKGRIWGVAWHPKGN-VFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCG 71
Query: 286 EWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
++ LA+ S D T ++ + T + H+ EV V W+ ++ +LA+C + + +
Sbjct: 72 QY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWI 129
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
W+++ DE E + HT + W+P +D V++S + DN ++++
Sbjct: 130 WEVAGDDEF-----------ECAAVLNPHTQDVKRVVWHPTKD-VLASASYDNTIKMFA- 176
Query: 405 AENIYHDED 413
E I +D D
Sbjct: 177 EEPIDNDWD 185
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 64/300 (21%), Positives = 123/300 (41%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H + R+ P +L A+ + A ++ SK + C+ L GH E
Sbjct: 58 HKRTIREIRWSPCGQYL-ASASFDATTAIW------SKSSGEFECNATLE--GHENEVKS 108
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+SWS+ G L + S D + +W++ + E + H V+ V WH + L
Sbjct: 109 VSWSR-SGGLLATCSRDKSVWIWEVAG---DDEFECAAVLNPHTQDVKRVVWHPTKDVLA 164
Query: 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLF-- 301
+ D+ + + + ++ +H S V + F+ E +++ S D T+K++
Sbjct: 165 SASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSC-SDDTTIKIWKA 223
Query: 302 ----DLRKIST--------ALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
+ ++T + T H ++ V W K ++A+ C G D
Sbjct: 224 YHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWC-KLTGLIATAC-GD-----DGI 276
Query: 349 RIDEEQTPEDAEDGPP--ELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
RI +E T + D P ++ G H ++ WNP + S ++D ++IW+++E
Sbjct: 277 RIFKE-TSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVSE 335
>UNIPROTKB|Q8TEB1 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 EMBL:CH471078 EMBL:AL136295 GO:GO:0080008 CTD:80344
HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:AF267858 EMBL:AK027223 EMBL:AK057636
EMBL:AK074296 EMBL:BX161405 EMBL:BX247970 EMBL:BC008858
EMBL:BC067132 EMBL:AF130070 EMBL:AL833831 IPI:IPI00178972
IPI:IPI00328589 IPI:IPI00328631 RefSeq:NP_001156956.1
RefSeq:NP_079506.3 RefSeq:NP_852002.1 UniGene:Hs.525251
ProteinModelPortal:Q8TEB1 SMR:Q8TEB1 IntAct:Q8TEB1 STRING:Q8TEB1
PhosphoSite:Q8TEB1 DMDM:37538034 PaxDb:Q8TEB1 PRIDE:Q8TEB1
Ensembl:ENST00000396936 Ensembl:ENST00000396941
Ensembl:ENST00000446197 Ensembl:ENST00000559115 GeneID:80344
KEGG:hsa:80344 UCSC:uc001wlv.3 UCSC:uc001wlz.3 UCSC:uc001wmb.4
GeneCards:GC14P024583 HGNC:HGNC:20258 HPA:HPA031157 MIM:613317
neXtProt:NX_Q8TEB1 PharmGKB:PA165478701 InParanoid:Q8TEB1
OMA:RMLHQRE PhylomeDB:Q8TEB1 GenomeRNAi:80344 NextBio:70930
Bgee:Q8TEB1 CleanEx:HS_WDR23 Genevestigator:Q8TEB1
GermOnline:ENSG00000100897 Uniprot:Q8TEB1
Length = 546
Score = 120 (47.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/136 (26%), Positives = 68/136 (50%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHEYLFGSVGDDQYL 252
+L G++D CL+ + ++L+ + HE V VA+ + + LF S GDD
Sbjct: 280 VLGGANDG--CLYVFDREQNRRTLQ----IESHEDDVNAVAFADISSQILF-SGGDDAIC 332
Query: 253 LIWDLRTPSVS--KPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+WD RT KPV ++ HQ + + ++++ S D+T+KL+D+R+ S+
Sbjct: 333 KVWDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISN-SKDQTIKLWDIRRFSSR- 390
Query: 311 HTFDSHKEEVFQVGWN 326
++ ++ Q W+
Sbjct: 391 EGMEASRQAATQQNWD 406
Score = 87 (35.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLP-GDESAKA 423
H + + D SW+P E+ ++SS + N L++WQ + Y +DD+P +E A A
Sbjct: 482 HKACVRDVSWHPFEEKIVSSSWDGN-LRLWQYRQAEYF-QDDMPESEECASA 531
>UNIPROTKB|Q5R7H5 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 GO:GO:0080008 CTD:80344 HOGENOM:HOG000241217
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:CR857585
EMBL:CR860141 RefSeq:NP_001126335.1 RefSeq:NP_001128756.1
UniGene:Pab.18820 UniGene:Pab.19847 ProteinModelPortal:Q5R7H5
GeneID:100173316 GeneID:100189652 KEGG:pon:100173316
KEGG:pon:100189652 InParanoid:Q5R7H5 Uniprot:Q5R7H5
Length = 546
Score = 120 (47.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/136 (26%), Positives = 68/136 (50%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHEYLFGSVGDDQYL 252
+L G++D CL+ + ++L+ + HE V VA+ + + LF S GDD
Sbjct: 280 VLGGANDG--CLYVFDREQNRRTLQ----IESHEDDVNAVAFADISSQILF-SGGDDAIC 332
Query: 253 LIWDLRTPSVS--KPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+WD RT KPV ++ HQ + + ++++ S D+T+KL+D+R+ S+
Sbjct: 333 KVWDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISN-SKDQTIKLWDIRRFSSR- 390
Query: 311 HTFDSHKEEVFQVGWN 326
++ ++ Q W+
Sbjct: 391 EGMEASRQAATQQNWD 406
Score = 87 (35.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLP-GDESAKA 423
H + + D SW+P E+ ++SS + N L++WQ + Y +DD+P +E A A
Sbjct: 482 HKACVRDVSWHPFEEKIVSSSWDGN-LRLWQYRQAEYF-QDDMPESEECASA 531
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/176 (27%), Positives = 81/176 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH L + + E + SGS D I LWDI + K + ++ H V +
Sbjct: 101 LMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI----RRKG--CVFRYRGHSQAVRCL 153
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ ++L S DD + +WDL + K + H VN + F+P NE++LA+GS
Sbjct: 154 RFSPDGKWL-ASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGS 208
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
+D+T++ +DL K + + V V +NP + + C R+ W+ R
Sbjct: 209 SDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 192 GHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LL+ G DD ++ LW IN SL H VE V + E +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTG------HTSPVESVRLNTPEELIVAG-SQSG 85
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+ +WDL +K +++++ H++ + L F+P+ E++ A+GS D +KL+D+R+ +
Sbjct: 86 SIRVWDLEA---AKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCV 140
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ H + V + ++P + LAS + +WDL+ + + GP ++ H
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/176 (27%), Positives = 81/176 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH L + + E + SGS D I LWDI + K + ++ H V +
Sbjct: 101 LMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI----RRKG--CVFRYRGHSQAVRCL 153
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ ++L S DD + +WDL + K + H VN + F+P NE++LA+GS
Sbjct: 154 RFSPDGKWL-ASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGS 208
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
+D+T++ +DL K + + V V +NP + + C R+ W+ R
Sbjct: 209 SDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 192 GHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LL+ G DD ++ LW IN SL H VE V + E +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTG------HTSPVESVRLNTPEELIVAG-SQSG 85
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+ +WDL +K +++++ H++ + L F+P+ E++ A+GS D +KL+D+R+ +
Sbjct: 86 SIRVWDLEA---AKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCV 140
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ H + V + ++P + LAS + +WDL+ + + GP ++ H
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/176 (27%), Positives = 81/176 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH L + + E + SGS D I LWDI + K + ++ H V +
Sbjct: 101 LMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI----RRKG--CVFRYRGHSQAVRCL 153
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ ++L S DD + +WDL + K + H VN + F+P NE++LA+GS
Sbjct: 154 RFSPDGKWL-ASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGS 208
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
+D+T++ +DL K + + V V +NP + + C R+ W+ R
Sbjct: 209 SDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 192 GHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LL+ G DD ++ LW IN SL H VE V + E +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTG------HTSPVESVRLNTPEELIVAG-SQSG 85
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+ +WDL +K +++++ H++ + L F+P+ E++ A+GS D +KL+D+R+ +
Sbjct: 86 SIRVWDLEA---AKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCV 140
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ H + V + ++P + LAS + +WDL+ + + GP ++ H
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/176 (27%), Positives = 81/176 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH L + + E + SGS D I LWDI + K + ++ H V +
Sbjct: 101 LMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI----RRKG--CVFRYRGHSQAVRCL 153
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ ++L S DD + +WDL + K + H VN + F+P NE++LA+GS
Sbjct: 154 RFSPDGKWL-ASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGS 208
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
+D+T++ +DL K + + V V +NP + + C R+ W+ R
Sbjct: 209 SDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 192 GHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LL+ G DD ++ LW IN SL H VE V + E +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTG------HTSPVESVRLNTPEELIVAG-SQSG 85
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+ +WDL +K +++++ H++ + L F+P+ E++ A+GS D +KL+D+R+ +
Sbjct: 86 SIRVWDLEA---AKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCV 140
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ H + V + ++P + LAS + +WDL+ + + GP ++ H
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 158 (60.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 52/206 (25%), Positives = 87/206 (42%)
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
E +L+ +C+W+ KS F V E V + R +++ DD
Sbjct: 242 EPWILASLYSGTLCIWNYQTQTMVKS------FDVTELPVRSAKFIARKQWVVAGA-DDM 294
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
++ +++ T K + AH + C+A +P ++L++ S D +KL+D K
Sbjct: 295 FIRVYNYNTMDKIKVFE---AHADYIRCVAVHPTLPYVLSS-SDDMLIKLWDWEKGWLCT 350
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE---------DAED 361
F+ H V QV +NPK+ AS L R + +W+L D T + D
Sbjct: 351 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFT 410
Query: 362 GPPELLFIHGG--HTSKISDFSWNPC 385
G + I G HT+K+ D+ C
Sbjct: 411 GGDKPYLITGSDDHTAKVWDYQTKSC 436
Score = 54 (24.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
GHT +S S++P E +I + +ED ++IW
Sbjct: 442 GHTHNVSAVSFHP-ELPIIITGSEDGTVRIW 471
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 57/239 (23%), Positives = 99/239 (41%)
Query: 168 CSPDLRLRGHSTEGYGLSWSKFKEG-HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH 226
C + + GHS G + +G H+ + S D + WDI + + FK H
Sbjct: 88 CENVMAMSGHS--GAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRR------FKGH 139
Query: 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNE 286
V V R + L S DD+ + IWD R + ++S +V + F E
Sbjct: 140 GNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPF----QVTAVCFGDTGE 195
Query: 287 WILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
+++ G D VK++D+RK LH H + + + +P+ + IL + + L VWD
Sbjct: 196 QVIS-GGIDNEVKIWDIRK-QAVLHHLRGHSDTITGMSLSPEGDFILTNA-MDNTLRVWD 252
Query: 347 LSRIDEEQTPEDAEDGPPELLFIHGGHTSK-ISDFSWNPCEDWVISSVAEDNILQIWQM 404
+ + G H + K + +W+P D + S A+ ++ IW +
Sbjct: 253 VRPYAPGERCVKVFQG-------HQHNFEKNLLRCAWSPGSDKITSGSADRHVY-IWDV 303
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 45/182 (24%), Positives = 84/182 (46%)
Query: 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD-DAQICLWDINAAPKNKSLEAMQIFKVHE 227
+P ++L GH E + + EG LL S D QI +W + + E + H
Sbjct: 46 APIMQLEGHEGEIFTAEFHP--EGELLLSSGFDRQIYIWQVY-----EDCENVMAMSGHS 98
Query: 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287
G V + + ++F + D+ L WD+ T + + H + VN + + +
Sbjct: 99 GAVMEAHFTPDGSHIF-TCSTDKTLAFWDIATGQRQRRFKG---HGNFVNSVQGSRRGQQ 154
Query: 288 ILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+L +GS D+T+K++D RK A HT +S +V V + E +++ + + +WD+
Sbjct: 155 LLCSGSDDRTIKIWDARK-KHAAHTLES-PFQVTAVCFGDTGEQVISGG-IDNEVKIWDI 211
Query: 348 SR 349
+
Sbjct: 212 RK 213
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 39/136 (28%), Positives = 70/136 (51%)
Query: 174 LRGHSTEGYGLSWSKFKEGH-LLSGSDDAQICLWDINA-APKNKSLEAMQIFKVHEGVVE 231
LRGHS G+S S EG +L+ + D + +WD+ AP + +++F+ H+ E
Sbjct: 220 LRGHSDTITGMSLSP--EGDFILTNAMDNTLRVWDVRPYAPGER---CVKVFQGHQHNFE 274
Query: 232 D----VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287
AW + + S D+++ IWD+ T + + + H VN + F+P E
Sbjct: 275 KNLLRCAWSPGSDKIT-SGSADRHVYIWDVNTRRI---LYKLPGHNGSVNAVDFSP-KEP 329
Query: 288 ILATGSTDKTVKLFDL 303
++ +GS+DKT+ L ++
Sbjct: 330 LILSGSSDKTLYLGEI 345
Score = 100 (40.3 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 34/169 (20%), Positives = 77/169 (45%)
Query: 245 SVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
S G D + IWD+R +V + + H + ++ +P ++IL T + D T++++D+R
Sbjct: 199 SGGIDNEVKIWDIRKQAV---LHHLRGHSDTITGMSLSPEGDFIL-TNAMDNTLRVWDVR 254
Query: 305 KISTA---LHTFDSHK----EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357
+ + F H+ + + + W+P ++ I + R + +WD++
Sbjct: 255 PYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSA-DRHVYIWDVNT-------- 305
Query: 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
+L+ GH ++ ++P E ++S + D L + ++ E
Sbjct: 306 ------RRILYKLPGHNGSVNAVDFSPKEPLILSG-SSDKTLYLGEIDE 347
Score = 75 (31.5 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 32/142 (22%), Positives = 63/142 (44%)
Query: 78 NYLMLAQVQLPLDDSENDARHYDD-DRS--DFGGFGCANGKVQIIQQINHDGEVNRARYM 134
N ++LAQ S+ND Y + D++ + G +N + I+Q H+GE+ A +
Sbjct: 8 NSVILAQ---EAKRSKNDLMAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFH 64
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG-H 193
P+ L+++ ++Y++ + C + + GHS G + +G H
Sbjct: 65 PEGELLLSSG-FDRQIYIWQVYED---------CENVMAMSGHS--GAVMEAHFTPDGSH 112
Query: 194 LLSGSDDAQICLWDINAAPKNK 215
+ + S D + WDI + +
Sbjct: 113 IFTCSTDKTLAFWDIATGQRQR 134
>UNIPROTKB|E2R747 [details] [associations]
symbol:CORO2A "Coronin" species:9615 "Canis lupus
familiaris" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:LLQMFYR EMBL:AAEX03007981
Ensembl:ENSCAFT00000003912 NextBio:20856381 Uniprot:E2R747
Length = 603
Score = 165 (63.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 66/254 (25%), Positives = 107/254 (42%)
Query: 122 INHDGEVNRARYMPQNPFLIATKT-VSAEVYVFDYSKHPSKPPLDGACSPDL-RLRGHST 179
I H + N + NP+ IA T S F H + G P ++ GH
Sbjct: 115 ITHSVQDNH--FCAVNPYFIAVVTECSCGGAFFVIPLHQT-----GKLDPHYPKVCGHKG 167
Query: 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLR 238
+ W+ F + + S S+D I +WDI K+L A + + H V V WH
Sbjct: 168 NVLDIKWNPFNDFEIASCSEDTTIKIWDIPKQLLTKNLTACKKELIGHTRRVGLVEWHPT 227
Query: 239 HEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
+ S G D +++W+L T + PV+++ HQ + ++FN N +LAT D+
Sbjct: 228 AANILFSSGYDYKVMVWNLDTKESVIMNPVRTIGCHQGVILSMSFNT-NGSLLATTCKDR 286
Query: 297 TVKLFDLRKISTALHT-FDSHK-EEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ 354
+++ D R + H+ +V +G K + S R+L VWD +
Sbjct: 287 KIRILDPRAGAVLQEANCTGHRANKVLFLGDLNKLLSTGTSRWNNRQLAVWDQDNLSVPL 346
Query: 355 TPEDAEDGPPELLF 368
+ D DG +LF
Sbjct: 347 SEVDL-DGSSGVLF 359
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 42 WPSLTVE-----WLPDREEPPGKDYSV-QKMILGTHT 72
WPS TVE WL D G + + +LGT T
Sbjct: 15 WPSRTVESRVQGWL-DEGVAEGAVSGIGSRTLLGTKT 50
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 55/188 (29%), Positives = 87/188 (46%)
Query: 184 LSW---SKFK-EGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR 238
++W +KF +G L+ S SDD + LWD S E + + H G V V +H
Sbjct: 145 INWVRCAKFSPDGRLIVSASDDKTVKLWD------KTSRECVHSYCEHGGFVTYVDFHPS 198
Query: 239 HEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTV 298
+ + G D + +WD RT + VQ H + VN L+F+P +++ T S+D T+
Sbjct: 199 GTCI-AAAGMDNTVKVWDTRTHRL---VQHYQLHSAAVNALSFHPSGNYLI-TASSDSTL 253
Query: 299 KLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE- 357
K+ DL + L+T H+ V ++ E AS ++MVW S D +
Sbjct: 254 KILDLME-GRLLYTLHGHQGPATTVAFSRTGE-YFASGGSDEQVMVWK-SNFDTVDYGDM 310
Query: 358 DAEDGPPE 365
A PP+
Sbjct: 311 KARRPPPQ 318
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 61/216 (28%), Positives = 98/216 (45%)
Query: 184 LSW---SKFK-EGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR 238
++W +KF +G L+ S SDD + LWD S E + + H G V V +H
Sbjct: 107 INWVRCAKFSPDGRLIVSASDDKTVKLWD------KSSRECVHSYCEHGGFVTYVDFHPS 160
Query: 239 HEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTV 298
+ + G D + +WD+RT + +Q H + VN L+F+P +++ T S+D T+
Sbjct: 161 GTCI-AAAGMDNTVKVWDVRTHRL---LQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTL 215
Query: 299 KLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358
K+ DL + L+T H+ V ++ E AS ++MVW S D E
Sbjct: 216 KILDLME-GRLLYTLHGHQGPATTVAFSRTGE-YFASGGSDEQVMVWK-SNFDIVDHGEV 272
Query: 359 AE-DGPPELLFIHGGHTSKISDFSWNPCEDWVISSV 393
+ PP L G+ ++ DF P + SV
Sbjct: 273 TKVPRPPATLASSMGNLPEV-DFPVPPGRGRSVESV 307
Score = 143 (55.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 50/177 (28%), Positives = 82/177 (46%)
Query: 173 RLRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
R GH +++S GHLL SGS D + +W N K +S +F+ H V
Sbjct: 18 RFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIWVPNV--KGEST----VFRAHTATVR 69
Query: 232 DVAWHLRHE-YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILA 290
V H + F + DD+ + +W K + S+ H + V C F+P ++
Sbjct: 70 SV--HFCSDGQSFVTASDDKTVKVWATHR---QKFLFSLSQHINWVRCAKFSPDGR-LIV 123
Query: 291 TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+ S DKTVKL+D + +H++ H V V ++P T +A+ + + VWD+
Sbjct: 124 SASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDV 178
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/189 (24%), Positives = 91/189 (48%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + VAWH + +F S G+D+ + IW L + S H+ + + ++P
Sbjct: 13 HKGRIWGVAWHPKGN-VFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCG 71
Query: 286 EWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
++ LA+ S D T ++ + T + H+ EV V W+ ++ +LA+C + + +
Sbjct: 72 QY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWI 129
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
W+++ DE E + HT + W+P +D +++S + DN ++++
Sbjct: 130 WEVAGDDEF-----------ECAAVLNPHTQDVKRVVWHPTKD-ILASASYDNTIKMFA- 176
Query: 405 AENIYHDED 413
E I +D D
Sbjct: 177 EEPIDNDWD 185
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 63/300 (21%), Positives = 121/300 (40%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H + R+ P +L A+ + A ++ SK + C+ L GH E
Sbjct: 58 HKRTIREIRWSPCGQYL-ASASFDATTAIW------SKSSGEFECNATLE--GHENEVKS 108
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+SWS+ G L + S D + +W++ + E + H V+ V WH + L
Sbjct: 109 VSWSR-SGGLLATCSRDKSVWIWEVAG---DDEFECAAVLNPHTQDVKRVVWHPTKDILA 164
Query: 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLF-- 301
+ D+ + + + ++ +H S V + F+ E +++ S D T+K++
Sbjct: 165 SASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSC-SDDTTIKIWRA 223
Query: 302 ------------DLRKISTALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
D + + + T H ++ V W K ++A+ C G D
Sbjct: 224 YHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWC-KLTGLIATAC-GD-----DGI 276
Query: 349 RIDEEQTPEDAEDGPP--ELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
RI +E + + D P ++ G H ++ WNP + S ++D ++IW++ E
Sbjct: 277 RIFKESS-DSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVTE 335
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 48/176 (27%), Positives = 81/176 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH L + + E + SGS D I LWDI + K + ++ H V +
Sbjct: 101 LMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI----RRKG--CVFRYRGHSQAVRCL 153
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ ++L S DD + +WDL + K + H VN + F+P NE++LA+GS
Sbjct: 154 RFSPDGKWL-ASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGS 208
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
+D+T++ +DL K + + V + +NP + + C R+ W+ R
Sbjct: 209 SDRTIRFWDLEKFQV-VSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 192 GHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LL+ G DD ++ LW IN SL H VE V + E +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTG------HTSPVESVRLNTPEELIVAG-SQSG 85
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+ +WDL +K +++++ H++ + L F+P+ E++ A+GS D +KL+D+R+ +
Sbjct: 86 SIRVWDLEA---AKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCV 140
Query: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 370
+ H + V + ++P + LAS + +WDL+ + + GP ++ H
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 51/194 (26%), Positives = 89/194 (45%)
Query: 169 SPDLRLRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHE 227
+P + L GH + Y + ++ G L+ SGS D +I LW ++ KN + K H+
Sbjct: 44 APIMLLSGHPSAVYTMKFNP--AGTLIASGSHDREIFLWRVHGDCKN-----FMVLKGHK 96
Query: 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEW 287
+ D+ W + S D+ + WD+ T K ++ + H S VN
Sbjct: 97 NAILDLHWTSDGSQIV-SASPDKTVRAWDVET---GKQIKKMAEHSSFVNSCCPTRRGPP 152
Query: 288 ILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
++ +GS D T KL+D+R+ A+ TF K ++ V ++ + I + + VWDL
Sbjct: 153 LIISGSDDGTAKLWDMRQRG-AIQTFPD-KYQITAVSFSDAADKIFTGG-VDNDVKVWDL 209
Query: 348 SRIDEEQTPEDAED 361
+ + T E +D
Sbjct: 210 RKGEATMTLEGHQD 223
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 44/182 (24%), Positives = 77/182 (42%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
G C + L+GH L W+ ++S S D + WD+ + K +
Sbjct: 84 GDCKNFMVLKGHKNAILDLHWTS-DGSQIVSASPDKTVRAWDVETGKQIKKMAE------ 136
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H V R L S DD +WD+R +Q+ + ++ ++F+
Sbjct: 137 HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGA---IQTF-PDKYQITAVSFSDAA 192
Query: 286 EWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
+ I TG D VK++DLRK A T + H++ + + +P +L + + +L VW
Sbjct: 193 DKIF-TGGVDNDVKVWDLRK-GEATMTLEGHQDTITGMSLSPDGSYLLTNG-MDNKLCVW 249
Query: 346 DL 347
D+
Sbjct: 250 DM 251
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/218 (24%), Positives = 96/218 (44%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH+ + + + + + S S D+ I +W + +Q+ + HE V +
Sbjct: 261 LKGHTKKVSSVIYHP-AQAVVFSASSDSTIRVWSVTGG------NCVQVVRAHESAVTGL 313
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
+ H +YL S +DQY D++T V V A + + C F+P + I TG+
Sbjct: 314 SLHATGDYLLSS-SEDQYWAFSDIQTGRVLTKVTDETAGCA-LTCAQFHP-DGLIFGTGT 370
Query: 294 TDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
D +K++DL++ T + F H V + ++ +N LA+ L +WDL ++
Sbjct: 371 GDSQIKIWDLKE-RTNVANFPGHSGPVTAIAFS-ENGYYLATGAQDSSLKLWDLRKLKNF 428
Query: 354 QTPE-DAEDGPPELLFIHGGHTSKI--SDFSWNPCEDW 388
+T D L+F G + SD C+ W
Sbjct: 429 KTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQW 466
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 70/267 (26%), Positives = 116/267 (43%)
Query: 93 ENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVS-AEVY 151
EN R + R+ GG G A +DG +N + N + A S V+
Sbjct: 224 ENRDRFRIESRT--GGVGPAVSVCMFTFHNTYDG-INCLDFSDDNLLVAAGMQESYIRVW 280
Query: 152 VFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF---KEGH--------LLSGSDD 200
D K PS D + RL GHS Y ++++ E LLS S D
Sbjct: 281 SLDGKKIPSDDSADEPPTNSRRLIGHSGPVYAVAFAPSATPSENAVAPTNARWLLSSSAD 340
Query: 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260
I LW ++ + M ++K H+ V D+ W Y F S G D+ +W T
Sbjct: 341 RTIRLWSLDL------WQCMVVYKGHDQPVWDLQWGPFGHY-FVSGGHDKTARLWV--TD 391
Query: 261 SVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEV 320
+ + + V H+ +V+C+ F+P + ++ TGS+D+TV+++ + A+ F H +
Sbjct: 392 HIRQQ-RIFVGHEQDVDCVCFHPNSAYVF-TGSSDRTVRMWAVTT-GNAVRMFTGHTGNI 448
Query: 321 FQVGWNPKNETILASCCLGRRLMVWDL 347
+ + +T LAS +++WDL
Sbjct: 449 TALACSRDGKT-LASADDHGSILLWDL 474
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/211 (22%), Positives = 97/211 (45%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L +G +D QI +W++ +L H+ VV D+++ + S D+ L
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSG------HQDVVRDLSFTPSGSLILVSASRDKTLR 179
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWDL K +Q + H V C + +P +L + + +K+V L+ +R T +
Sbjct: 180 IWDLNKHG--KQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSY-TLIRKL 235
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+ H+ V ++P + +L + +++WD + ++ + PP + H
Sbjct: 236 EGHQSSVVSCDFSP-DSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPP--MDDSDVH 292
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
S + ++P E +++VA+D +L+IW +
Sbjct: 293 ISSLRSVCFSP-EGLYLATVADDRLLRIWAL 322
>ZFIN|ZDB-GENE-030131-2258 [details] [associations]
symbol:coro2a "coronin, actin binding protein, 2A"
species:7955 "Danio rerio" [GO:0015629 "actin cytoskeleton"
evidence=IBA] [GO:0030036 "actin cytoskeleton organization"
evidence=IBA] [GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-2258 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629
GO:GO:0051015 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 EMBL:BX005000 EMBL:AL954695
IPI:IPI00972377 Ensembl:ENSDART00000011645 ArrayExpress:F1QR96
Bgee:F1QR96 Uniprot:F1QR96
Length = 533
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/205 (25%), Positives = 92/205 (44%)
Query: 173 RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI----FKVHEG 228
++ GH + W+ F + + S S+DA + +W+I P++ L+ + + + H
Sbjct: 82 KVSGHRGNVLDIKWNHFNDFCIASCSEDATVKIWEI---PEHGVLKTITVPWKELQGHSR 138
Query: 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVNCLAFNPFNE 286
V + WH + S G D +++W L P + PV+S+ H V ++FN
Sbjct: 139 RVGLIEWHPTANNIIFSTGYDYQVMVWKLDVPEQVIKNPVRSISVHSDVVLSMSFNTDGS 198
Query: 287 WILATGSTDKTVKLFDLRKISTALHT-FDSHK-EEVFQVGWNPKNETILASCCLG-RRLM 343
LAT DK +++ D R + T SHK +V +G N K + R++
Sbjct: 199 K-LATSCKDKKIRVIDPRTGTILQETNCKSHKASKVLFLG-NLKMLLSTGNSRWNHRQIA 256
Query: 344 VWDLSRIDEEQTPEDAEDGPPELLF 368
+WD + + ED DG +LF
Sbjct: 257 LWDQEDLSQPSYSEDL-DGSSGVLF 280
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/211 (22%), Positives = 97/211 (45%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L +G +D QI +W++ +L H+ VV D+++ + S D+ L
Sbjct: 128 LATGLNDGQIKIWEVQTGLLLLNLSG------HQDVVRDLSFTPSGSLILVSASRDKTLR 181
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTF 313
IWDL K +Q + H V C + +P +L + + +K+V L+ +R T +
Sbjct: 182 IWDLNKHG--KQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSY-TLIRKL 237
Query: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+ H+ V ++P + +L + +++WD + ++ + PP + H
Sbjct: 238 EGHQSSVVSCDFSP-DSALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPP--MDDSDVH 294
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
S + ++P E +++VA+D +L+IW +
Sbjct: 295 ISSLRSVCFSP-EGLYLATVADDRLLRIWAL 324
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 61/216 (28%), Positives = 98/216 (45%)
Query: 184 LSW---SKFK-EGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR 238
++W +KF +G L+ S SDD + LWD S E + + H G V V +H
Sbjct: 145 INWVRCAKFSPDGRLIVSASDDKTVKLWD------KSSRECVHSYCEHGGFVTYVDFHPS 198
Query: 239 HEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTV 298
+ + G D + +WD+RT + +Q H + VN L+F+P +++ T S+D T+
Sbjct: 199 GTCI-AAAGMDNTVKVWDVRTHRL---LQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTL 253
Query: 299 KLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358
K+ DL + L+T H+ V ++ E AS ++MVW S D E
Sbjct: 254 KILDLME-GRLLYTLHGHQGPATTVAFSRTGE-YFASGGSDEQVMVWK-SNFDIVDHGEV 310
Query: 359 AE-DGPPELLFIHGGHTSKISDFSWNPCEDWVISSV 393
+ PP L G+ ++ DF P + SV
Sbjct: 311 TKVPRPPATLASSMGNLPEV-DFPVPPGRGRSVESV 345
Score = 143 (55.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 50/177 (28%), Positives = 82/177 (46%)
Query: 173 RLRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
R GH +++S GHLL SGS D + +W N K +S +F+ H V
Sbjct: 56 RFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIWVPNV--KGEST----VFRAHTATVR 107
Query: 232 DVAWHLRHE-YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILA 290
V H + F + DD+ + +W K + S+ H + V C F+P ++
Sbjct: 108 SV--HFCSDGQSFVTASDDKTVKVWATHR---QKFLFSLSQHINWVRCAKFSPDGR-LIV 161
Query: 291 TGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+ S DKTVKL+D + +H++ H V V ++P T +A+ + + VWD+
Sbjct: 162 SASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDV 216
>GENEDB_PFALCIPARUM|PFL1975c [details] [associations]
symbol:PFL1975c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/227 (24%), Positives = 107/227 (47%)
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE---DVAWHLRHE 240
L WSK +L +G+ QI + +++A L + + EG+ + D++ +
Sbjct: 136 LEWSK--NDNLFAGNSLGQIVI--LSSA-----LNLLDNY-AFEGLTKNVLDISLSCCNT 185
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L G D +IWD++T V K ++ + ++CLA+NP N+ I+A+G+ T+
Sbjct: 186 KLAGCA-DTCNPIIWDIKTRKVIKDLKCKNIDTNNISCLAWNPIND-IVASGNRTHTISF 243
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
+D+R ++ + + +SHK V ++ WN N L SC + +WD+ + ++
Sbjct: 244 WDIR-MNKPIISLNSHKANVNKIKWN-NNGIYLLSCSKDSLIKLWDIRNFKLLYSYKN-- 299
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
D F + I+ WNP ++ + SS ++ + +N
Sbjct: 300 DQIQNNKFTSNYEPTYIA---WNPIQNHIFSSADNKGNIKFYSTNDN 343
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 55/234 (23%), Positives = 100/234 (42%)
Query: 195 LSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L+G +D +WDI K L+ I + +AW+ ++ + S +
Sbjct: 187 LAGCADTCNPIIWDIKTRKVIKDLKCKNI---DTNNISCLAWNPIND-IVASGNRTHTIS 242
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL--- 310
WD+R ++KP+ S+ +H++ VN + +N ++L+ S D +KL+D+R
Sbjct: 243 FWDIR---MNKPIISLNSHKANVNKIKWNNNGIYLLSC-SKDSLIKLWDIRNFKLLYSYK 298
Query: 311 ------HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPP 364
+ F S+ E + + WNP I +S + + + QT
Sbjct: 299 NDQIQNNKFTSNYEPTY-IAWNPIQNHIFSSADNKGNIKFYSTNDNKCIQT--------- 348
Query: 365 ELLFIHG--GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN--IYHDEDD 414
++ HG S IS WNP +++S +D +L+ W + + IY E D
Sbjct: 349 -IVSAHGIDNKISSISLLDWNPLGH-ILTSFGDDKLLKFWSTSSSGSIYSKEID 400
>UNIPROTKB|Q8I518 [details] [associations]
symbol:PFL1975c "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/227 (24%), Positives = 107/227 (47%)
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE---DVAWHLRHE 240
L WSK +L +G+ QI + +++A L + + EG+ + D++ +
Sbjct: 136 LEWSK--NDNLFAGNSLGQIVI--LSSA-----LNLLDNY-AFEGLTKNVLDISLSCCNT 185
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L G D +IWD++T V K ++ + ++CLA+NP N+ I+A+G+ T+
Sbjct: 186 KLAGCA-DTCNPIIWDIKTRKVIKDLKCKNIDTNNISCLAWNPIND-IVASGNRTHTISF 243
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
+D+R ++ + + +SHK V ++ WN N L SC + +WD+ + ++
Sbjct: 244 WDIR-MNKPIISLNSHKANVNKIKWN-NNGIYLLSCSKDSLIKLWDIRNFKLLYSYKN-- 299
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
D F + I+ WNP ++ + SS ++ + +N
Sbjct: 300 DQIQNNKFTSNYEPTYIA---WNPIQNHIFSSADNKGNIKFYSTNDN 343
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 55/234 (23%), Positives = 100/234 (42%)
Query: 195 LSG-SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L+G +D +WDI K L+ I + +AW+ ++ + S +
Sbjct: 187 LAGCADTCNPIIWDIKTRKVIKDLKCKNI---DTNNISCLAWNPIND-IVASGNRTHTIS 242
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL--- 310
WD+R ++KP+ S+ +H++ VN + +N ++L+ S D +KL+D+R
Sbjct: 243 FWDIR---MNKPIISLNSHKANVNKIKWNNNGIYLLSC-SKDSLIKLWDIRNFKLLYSYK 298
Query: 311 ------HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPP 364
+ F S+ E + + WNP I +S + + + QT
Sbjct: 299 NDQIQNNKFTSNYEPTY-IAWNPIQNHIFSSADNKGNIKFYSTNDNKCIQT--------- 348
Query: 365 ELLFIHG--GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN--IYHDEDD 414
++ HG S IS WNP +++S +D +L+ W + + IY E D
Sbjct: 349 -IVSAHGIDNKISSISLLDWNPLGH-ILTSFGDDKLLKFWSTSSSGSIYSKEID 400
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 59/212 (27%), Positives = 98/212 (46%)
Query: 187 SKFK-EGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244
+KF +G L+ S S+D I +WD NK + + F G VA++ +
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTT----NK--QCVNNFSDFVGFANFVAFNPNGTCI-A 202
Query: 245 SVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLR 304
S G D + IWD+R V+K +Q H VNC++F+P +++ T S+D T+K+ DL
Sbjct: 203 SAGSDHTVKIWDIR---VNKLLQHYQVHSGGVNCVSFHPSGNYLI-TASSDGTLKILDLL 258
Query: 305 KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE---- 360
+ ++T H VF V ++ E + S ++++W + DE + ++
Sbjct: 259 E-GRLIYTLQGHTGPVFTVSFSKGGE-LFTSGGADAQVLLWR-TNFDELNYKDVSKRNLK 315
Query: 361 ----DGPPELLFIHGG----HTSKISDFSWNP 384
D PP LL I+ H +I NP
Sbjct: 316 RLHFDSPPHLLDIYPRTPHPHEGRIDTVEINP 347
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 48/200 (24%), Positives = 93/200 (46%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + VAWH + F S G+D+ + IW L S S H+ + + ++P
Sbjct: 13 HKGRIWGVAWHPKGN-TFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIRWSPCG 71
Query: 286 EWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
++ LA+ S D T ++ + T + H+ EV V W+ K+ +LA+C + + +
Sbjct: 72 QY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-KSGGLLATCSRDKSVWI 129
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
W+++ DE E + HT + W+P ++ +++S + DN ++++
Sbjct: 130 WEVAGDDEF-----------ECAAVLNPHTQDVKRVVWHPTKE-ILASASYDNTIKMF-- 175
Query: 405 AENIYHDEDDLPGDESAKAS 424
AE+ + D S+ S
Sbjct: 176 AESALDSDWDCTATLSSHTS 195
Score = 134 (52.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 65/300 (21%), Positives = 120/300 (40%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H + R+ P +L A+ + A ++ SK + C+ L GH E
Sbjct: 58 HKRTIREIRWSPCGQYL-ASASFDATTAIW------SKSSGEFECNATLE--GHENEVKS 108
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+SWSK G L + S D + +W++ + E + H V+ V WH E L
Sbjct: 109 VSWSK-SGGLLATCSRDKSVWIWEVAG---DDEFECAAVLNPHTQDVKRVVWHPTKEILA 164
Query: 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLF-- 301
+ D+ + + S ++ +H S V + F+ E +++ S D T+K++
Sbjct: 165 SASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSC-SDDTTLKIWRA 223
Query: 302 ------------DLRKISTALHTFDS-HKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
D + + + T H ++ V W K ++A+ C G D
Sbjct: 224 YHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIYDVSWC-KLTGLIATAC-GD-----DGI 276
Query: 349 RIDEEQTPEDAEDGPP--ELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
RI +E + + D P ++ H ++ WNP + S ++D ++IW+M +
Sbjct: 277 RIFKESS-DSKRDEPTFEQVTAEESAHEQDVNSVEWNPVMAGQLISCSDDGTIKIWKMLD 335
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 42/183 (22%), Positives = 88/183 (48%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH +G++W K S +D I +W ++ + S + + + H+ + ++
Sbjct: 10 LQGHKGRIWGVAWHP-KGNTFASCGEDKAIRIWSLSG--NSWSTKTI-LSDGHKRTIREI 65
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
W +YL S D IW ++ + ++ H++EV ++++ + +LAT S
Sbjct: 66 RWSPCGQYL-ASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSK-SGGLLATCS 122
Query: 294 TDKTVKLFDLR---KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
DK+V ++++ + A + H ++V +V W+P E ILAS + ++ S +
Sbjct: 123 RDKSVWIWEVAGDDEFECAA-VLNPHTQDVKRVVWHPTKE-ILASASYDNTIKMFAESAL 180
Query: 351 DEE 353
D +
Sbjct: 181 DSD 183
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 45/189 (23%), Positives = 91/189 (48%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
H+G + VAWH + +F S G+D+ + IW L + S H+ + + ++P
Sbjct: 13 HKGRIWGVAWHPKGN-VFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSPCG 71
Query: 286 EWILATGSTDKTVKLFDLRKISTALH-TFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
++ LA+ S D T ++ + T + H+ EV V W+ ++ +LA+C + + +
Sbjct: 72 QY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWI 129
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
W+++ DE E + HT + W+P ++ +++S + DN ++++
Sbjct: 130 WEVAGDDEF-----------ECAAVLNSHTQDVKRVVWHPTKE-ILASASYDNTIKMYA- 176
Query: 405 AENIYHDED 413
E I +D D
Sbjct: 177 EEPIDNDWD 185
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 56/250 (22%), Positives = 102/250 (40%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH E +SWS+ G L + S D + +W++ + E + H V+ V
Sbjct: 99 LEGHENEVKSVSWSR-SGGLLATCSRDKSVWIWEVAG---DDEFECAAVLNSHTQDVKRV 154
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
WH E L + D+ + + + ++ +H S + + F+ E +++ S
Sbjct: 155 VWHPTKEILASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERLVSC-S 213
Query: 294 TDKTVKLF--------------DLRKISTALHTFDS-HKEEVFQVGWNPKNETILASCCL 338
D TVK++ D + + + T H ++ V W K ++A+ C
Sbjct: 214 DDTTVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWC-KLTGLIATAC- 271
Query: 339 GRRLMVWDLSRIDEEQTPEDAEDGPP--ELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396
G D RI +E T + D P +L H ++ WNP + S ++D
Sbjct: 272 GD-----DGIRIFKE-TSDSKPDEPTFEQLTAEESAHDQDVNSVQWNPVVAGQLISCSDD 325
Query: 397 NILQIWQMAE 406
++IW++ E
Sbjct: 326 GTIKIWKVTE 335
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 43/183 (23%), Positives = 86/183 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L+GH +G++W K S +D I +W + S + + + H+ + ++
Sbjct: 10 LQGHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLTG--NTWSTKTI-LSDGHKRTIREI 65
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGS 293
W +YL S D IW ++ + ++ H++EV ++++ + +LAT S
Sbjct: 66 QWSPCGQYL-ASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCS 122
Query: 294 TDKTVKLFDLR---KISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
DK+V ++++ + A +SH ++V +V W+P E ILAS + ++ I
Sbjct: 123 RDKSVWIWEVAGDDEFECAA-VLNSHTQDVKRVVWHPTKE-ILASASYDNTIKMYAEEPI 180
Query: 351 DEE 353
D +
Sbjct: 181 DND 183
>TAIR|locus:2122133 [details] [associations]
symbol:AT4G35370 "AT4G35370" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00522472
RefSeq:NP_195263.4 UniGene:At.54614 ProteinModelPortal:F4JN04
SMR:F4JN04 PRIDE:F4JN04 EnsemblPlants:AT4G35370.1 GeneID:829690
KEGG:ath:AT4G35370 OMA:FRNIVAS Uniprot:F4JN04
Length = 433
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 51/218 (23%), Positives = 106/218 (48%)
Query: 191 EGHLLS-GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
+G+ ++ G+ ++ I +WD++ +L H G V D+AW+ + S +D
Sbjct: 179 KGNFVAIGTMESSIEIWDLDLVCTCATLCTTGTDNSHTGPVIDLAWNKEFRNIVASGSED 238
Query: 250 QYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTA 309
+ + +WD+ T ++ H+ +V+ +A+N + +L +GS D+TV L D R S +
Sbjct: 239 KKVKVWDVATGKCKVTMEH---HEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNS 295
Query: 310 LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFI 369
+ S + +V ++ W+P +E + +D +R A D P + I
Sbjct: 296 GLKW-STEAKVEKLAWDPHSEHSFVVSLKDGTVKGFD-TR---------ASDLSPSFI-I 343
Query: 370 HGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAEN 407
H H S++S S+N ++++ + D +++W ++ N
Sbjct: 344 HA-HDSEVSSISYNIHAPNLLATGSADESVKLWDLSNN 380
Score = 152 (58.6 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
G C + + H + + ++W+ + LLSGS D + L D P N L+
Sbjct: 249 GKCK--VTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKD-GRDPSNSGLKWST---- 301
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFN 285
E VE +AW E+ F D + +D R +S P + AH SEV+ +++N
Sbjct: 302 -EAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLS-PSFIIHAHDSEVSSISYNIHA 359
Query: 286 EWILATGSTDKTVKLFDLRKISTA-LHTFDSHKEEVFQVGWNPKNETILA 334
+LATGS D++VKL+DL + + T + EVF V ++ +LA
Sbjct: 360 PNLLATGSADESVKLWDLSNNQPSWIATNKPNAGEVFSVSFSADCPFLLA 409
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 47/173 (27%), Positives = 78/173 (45%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H+ L+W+K + SGS+D ++ +WD+ ++E HE V VAW+
Sbjct: 215 HTGPVIDLAWNKEFRNIVASGSEDKKVKVWDVATGKCKVTMEH------HEKKVHAVAWN 268
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
+ S D+ +++ D R PS S S +++V LA++P +E D
Sbjct: 269 NYTPEVLLSGSRDRTVVLKDGRDPSNSGLKWST---EAKVEKLAWDPHSEHSFVVSLKDG 325
Query: 297 TVKLFDLRKISTA-LHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
TVK FD R + +H EV + +N +LA+ + +WDLS
Sbjct: 326 TVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLS 378
>UNIPROTKB|Q12834 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9606 "Homo sapiens" [GO:0051301 "cell division"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050773
"regulation of dendrite development" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;TAS]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0090129
"positive regulation of synapse maturation" evidence=ISS]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=ISS] [GO:0005819 "spindle" evidence=TAS] [GO:0007049 "cell
cycle" evidence=TAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005813 GO:GO:0048471 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0043234 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007094 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
EMBL:CH471059 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0051436 GO:GO:0050773 GO:GO:0000922 Reactome:REACT_8017
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0051437
GO:GO:0040020 GO:GO:0000236 PDB:4GGD PDBsum:4GGD GO:GO:0051488
KO:K03363 EMBL:U05340 EMBL:AF099644 EMBL:AK312780 EMBL:BT007388
EMBL:DQ473545 EMBL:AL139289 EMBL:BC000624 EMBL:BC001088
EMBL:BC006272 EMBL:BC009425 EMBL:BC009426 EMBL:BC010044
EMBL:BC012803 EMBL:BC012827 EMBL:BC013303 EMBL:BC015998
EMBL:BC024257 EMBL:BC031294 EMBL:BC110321 IPI:IPI00329526
PIR:A56021 RefSeq:NP_001246.2 UniGene:Hs.524947 PDB:4GGA PDB:4GGC
PDBsum:4GGA PDBsum:4GGC ProteinModelPortal:Q12834 SMR:Q12834
DIP:DIP-29655N IntAct:Q12834 MINT:MINT-2211271 STRING:Q12834
PhosphoSite:Q12834 DMDM:37537762 PaxDb:Q12834 PRIDE:Q12834
DNASU:991 Ensembl:ENST00000310955 Ensembl:ENST00000372462
GeneID:991 KEGG:hsa:991 UCSC:uc001cix.3 CTD:991
GeneCards:GC01P043824 H-InvDB:HIX0034879 HGNC:HGNC:1723
HPA:CAB004525 MIM:603618 neXtProt:NX_Q12834 PharmGKB:PA26257
HOGENOM:HOG000195514 HOVERGEN:HBG001024 InParanoid:Q12834
OMA:RTPGKSN OrthoDB:EOG4CC414 PhylomeDB:Q12834 GenomeRNAi:991
NextBio:4160 PMAP-CutDB:Q12834 ArrayExpress:Q12834 Bgee:Q12834
CleanEx:HS_CDC20 Genevestigator:Q12834 GermOnline:ENSG00000117399
Uniprot:Q12834
Length = 499
Score = 148 (57.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 51/203 (25%), Positives = 89/203 (43%)
Query: 174 LRGHSTEGYGLSWSKFKEG-HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
L GHS E GL W+ +G HL SG +D + +W +AP +Q F H+G V+
Sbjct: 305 LSGHSQEVCGLRWAP--DGRHLASGGNDNLVNVWP--SAPGEGGWVPLQTFTQHQGAVKA 360
Query: 233 VAWHLRHEYLFGSVG--DDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNP-FNEWIL 289
VAW + + G D+++ IW++ + + + +V AH S+V + ++P + E I
Sbjct: 361 VAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC---LSAVDAH-SQVCSILWSPHYKELIS 416
Query: 290 ATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
G + ++ ++ H V + +P T+ AS L +W
Sbjct: 417 GHGFAQNQLVIWKYPTMAKVAE-LKGHTSRVLSLTMSPDGATV-ASAAADETLRLWRCFE 474
Query: 350 IDEEQTPEDAEDGPPELLFIHGG 372
+D + E + + IH G
Sbjct: 475 LDPARRREREKASAAKSSLIHQG 497
Score = 120 (47.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 44/186 (23%), Positives = 88/186 (47%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK--PVQSVVAHQSEVNCLAFNP 283
H V + W +L S G+D + +W P P+Q+ HQ V +A+ P
Sbjct: 308 HSQEVCGLRWAPDGRHL-ASGGNDNLVNVWP-SAPGEGGWVPLQTFTQHQGAVKAVAWCP 365
Query: 284 FNEWILATG--STDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGR- 340
+ +LATG ++D+ ++++++ L D+H + V + W+P + +++ +
Sbjct: 366 WQSNVLATGGGTSDRHIRIWNVCS-GACLSAVDAHSQ-VCSILWSPHYKELISGHGFAQN 423
Query: 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQ 400
+L++W + P A+ EL GHTS++ + +P + ++S A D L+
Sbjct: 424 QLVIW--------KYPTMAKVA--ELK----GHTSRVLSLTMSP-DGATVASAAADETLR 468
Query: 401 IWQMAE 406
+W+ E
Sbjct: 469 LWRCFE 474
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 52/226 (23%), Positives = 98/226 (43%)
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEY 241
Y L+ + G++L+ + D + LW +A L+ +Q+ + E + VAW Y
Sbjct: 185 YYLNLVDWSSGNVLAVALDNSVYLW---SASSGDILQLLQMEQPGE-YISSVAWIKEGNY 240
Query: 242 LFGSVGDDQY-LLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL 300
L +VG + +WD++ K ++++ +H + V L++N + IL++GS +
Sbjct: 241 L--AVGTSSAEVQLWDVQQ---QKRLRNMTSHSARVGSLSWNSY---ILSSGSRSGHIHH 292
Query: 301 FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
D+R + T H +EV + W P LAS + VW P +
Sbjct: 293 HDVRVAEHHVATLSGHSQEVCGLRWAPDGRH-LASGGNDNLVNVWP-------SAPGEGG 344
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA--EDNILQIWQM 404
P + H G ++ W P + V+++ D ++IW +
Sbjct: 345 WVPLQTFTQHQGAVKAVA---WCPWQSNVLATGGGTSDRHIRIWNV 387
Score = 53 (23.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 109 FGCANGKVQIIQQINHDGE-VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGA 167
+ ++G + + Q+ GE ++ ++ + +L A T SAEV ++D + L
Sbjct: 209 WSASSGDILQLLQMEQPGEYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQQKR---LRNM 264
Query: 168 CSPDLRLRGHSTEGYGLSWSKFKEGHL 194
S R+ S Y LS S + GH+
Sbjct: 265 TSHSARVGSLSWNSYILS-SGSRSGHI 290
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 158 (60.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 40/151 (26%), Positives = 71/151 (47%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWH 236
H + L W+K K +LS D +WD + EA Q F H DV W
Sbjct: 265 HKGPIFALKWNK-KGNFILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDWQ 317
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK 296
+ F S D + + L +P+++ H +EVN + ++P +LA+ S D
Sbjct: 318 SNNT--FASCSTDMCIHVCKL---GQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDM 371
Query: 297 TVKLFDLRKISTALHTFDSHKEEVFQVGWNP 327
T+K++ +++ S +H +H +E++ + W+P
Sbjct: 372 TLKIWSMKQDS-CVHDLQAHNKEIYTIKWSP 401
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 60/248 (24%), Positives = 106/248 (42%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE-- 231
LRGH +E + +W+ + L SGS D+ +W+++ + S + + + EG +
Sbjct: 165 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 232 ---DVA---WHLRHEYLF-GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPF 284
DV W+ L GS D + IW + +++ + H+ + L +N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSY--DGFARIWT-KDGNLASTLGQ---HKGPIFALKWNKK 277
Query: 285 NEWILATGSTDKTVKLFDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
+IL+ G DKT ++D A F H V W N ASC + V
Sbjct: 278 GNFILSAG-VDKTTIIWDAHT-GEAKQQFPFHSAPALDVDWQSNNT--FASCSTDMCIHV 333
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
L +D P + GHT++++ W+P + +++S ++D L+IW M
Sbjct: 334 CKLG-----------QDRPIKTF---QGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSM 378
Query: 405 AEN-IYHD 411
++ HD
Sbjct: 379 KQDSCVHD 386
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 160 (61.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 59/211 (27%), Positives = 107/211 (50%)
Query: 102 DRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSK 161
D +D GG + + + Q+ H G V + QNP L+A+ +EV+++D S P++
Sbjct: 108 DATDGGGSDDQSSLIGVGQR--HSGPVQSIDFNVQNPNLLASGGSDSEVFIWDLSD-PTQ 164
Query: 162 PPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAM 220
P A +P + + S++ ++W+K K H+L S S + I +WD+ + K+L +
Sbjct: 165 P---SALNPGSKSQ-QSSDITCVAWNK-KVAHILGSASYNGYIVIWDLKS---KKTLMTI 216
Query: 221 QIFKVHEGVVEDVAWHLRHE-YLFGSVGDDQYLLI--WDLRTPSVSKPVQSVVAHQSEVN 277
+ + + WH + + DD + +I WDLR + + PV+S+ H+ V
Sbjct: 217 ND-RNRKCKYRSIVWHPSEATQIVAASEDDDHPVIQAWDLR--NTTSPVKSMEGHKKGVW 273
Query: 278 CLAFNPF-NEWILATGSTDKTVKL-FDLRKI 306
L++ P N +L+TG +KT FD ++I
Sbjct: 274 GLSWCPSDNALLLSTGKDNKTFCWNFDRQEI 304
Score = 158 (60.7 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 59/269 (21%), Positives = 112/269 (41%)
Query: 149 EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD- 207
E+Y D + + L G+ S R + +G + S F+ G + D+ I LWD
Sbjct: 45 EIYSLDITNESKQMTLKGSTSSSTRF---NKVVWGQASSNFQNGIIAGAMDNGTINLWDP 101
Query: 208 -----INAAPKNKSLEAMQIFKV---HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259
+A S + + V H G V+ + +++++ L S G D + IWDL
Sbjct: 102 TKILASDATDGGGSDDQSSLIGVGQRHSGPVQSIDFNVQNPNLLASGGSDSEVFIWDLSD 161
Query: 260 PSVSKPVQ--SVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTALHTFDSHK 317
P+ + S S++ C+A+N IL + S + + ++DL+ T + D ++
Sbjct: 162 PTQPSALNPGSKSQQSSDITCVAWNKKVAHILGSASYNGYIVIWDLKSKKTLMTINDRNR 221
Query: 318 EEVFQ-VGWNPKNETILASCCLGRR---LMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
+ ++ + W+P T + + + WDL +P + +G H
Sbjct: 222 KCKYRSIVWHPSEATQIVAASEDDDHPVIQAWDLRNTT---SPVKSMEG----------H 268
Query: 374 TSKISDFSWNPCEDWVISSVAEDNILQIW 402
+ SW P ++ ++ S +DN W
Sbjct: 269 KKGVWGLSWCPSDNALLLSTGKDNKTFCW 297
Score = 149 (57.5 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 44/218 (20%), Positives = 95/218 (43%)
Query: 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR-LRG----HSTEGYGLSWSKFKEGHL 194
+IA + + ++D +K + DG S D L G HS + ++ L
Sbjct: 86 IIAGAMDNGTINLWDPTKILASDATDGGGSDDQSSLIGVGQRHSGPVQSIDFNVQNPNLL 145
Query: 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254
SG D+++ +WD++ + +L + + VAW+ + ++ GS + Y++I
Sbjct: 146 ASGGSDSEVFIWDLSDPTQPSALNPGSKSQQSSDIT-CVAWNKKVAHILGSASYNGYIVI 204
Query: 255 WDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDK---TVKLFDLRKISTALH 311
WDL++ + + + + ++P + S D ++ +DLR ++ +
Sbjct: 205 WDLKSKKTLMTINDR-NRKCKYRSIVWHPSEATQIVAASEDDDHPVIQAWDLRNTTSPVK 263
Query: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
+ + HK+ V+ + W P + +L S + W+ R
Sbjct: 264 SMEGHKKGVWGLSWCPSDNALLLSTGKDNKTFCWNFDR 301
Score = 51 (23.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 321 FQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT 355
F+V W+P+ +L++ ++ V+ L ++E+ T
Sbjct: 340 FEVQWSPRVPALLSTSSYVGKVNVYSLQDVNEKST 374
>UNIPROTKB|F1MVT2 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 IPI:IPI00710208 UniGene:Bt.20137
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:DAAA02028032 ProteinModelPortal:F1MVT2
Ensembl:ENSBTAT00000028515 ArrayExpress:F1MVT2 Uniprot:F1MVT2
Length = 546
Score = 119 (46.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 36/136 (26%), Positives = 68/136 (50%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW-HLRHEYLFGSVGDDQYL 252
+L G++D CL+ + ++L+ + HE V VA+ + + LF S GDD
Sbjct: 280 VLGGANDG--CLYVFDREQNRRTLQ----IESHEDDVNAVAFADVSSQILF-SGGDDAIC 332
Query: 253 LIWDLRTPSVS--KPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKLFDLRKISTAL 310
+WD RT KPV ++ HQ + + ++++ S D+T+KL+D+R+ S+
Sbjct: 333 KVWDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISN-SKDQTIKLWDIRRFSSR- 390
Query: 311 HTFDSHKEEVFQVGWN 326
++ ++ Q W+
Sbjct: 391 EGMEASRQAATQQNWD 406
Score = 85 (35.0 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 373 HTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPGDE 419
H + + D SW+P E+ ++SS + N L++WQ + Y +DD+P E
Sbjct: 482 HKACVRDVSWHPFEEKIVSSSWDGN-LRLWQYRQAEYF-QDDMPESE 526
WARNING: HSPs involving 759 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.135 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 424 414 0.00081 118 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1009
No. of states in DFA: 628 (67 KB)
Total size of DFA: 326 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.56u 0.11s 36.67t Elapsed: 00:00:01
Total cpu time: 36.63u 0.11s 36.74t Elapsed: 00:00:01
Start: Tue May 21 09:38:43 2013 End: Tue May 21 09:38:44 2013
WARNINGS ISSUED: 2