Query 014435
Match_columns 424
No_of_seqs 179 out of 2120
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 05:05:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014435.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014435hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 2.8E-67 6.1E-72 494.5 40.3 393 22-424 43-463 (537)
2 KOG1177 Long chain fatty acid 100.0 2.2E-64 4.7E-69 444.1 28.7 393 21-424 74-516 (596)
3 COG0365 Acs Acyl-coenzyme A sy 100.0 5.4E-63 1.2E-67 463.0 37.2 379 23-424 39-451 (528)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 4.7E-62 1E-66 474.8 40.7 389 25-424 39-456 (534)
5 PTZ00342 acyl-CoA synthetase; 100.0 4.3E-61 9.4E-66 478.1 37.8 396 22-424 89-626 (746)
6 PLN02614 long-chain acyl-CoA s 100.0 3.1E-61 6.7E-66 480.2 36.2 396 24-424 79-552 (666)
7 PLN02861 long-chain-fatty-acid 100.0 3.6E-60 7.8E-65 472.9 35.9 396 23-424 76-549 (660)
8 PLN02574 4-coumarate--CoA liga 100.0 5.8E-59 1.2E-63 458.3 42.8 394 24-424 66-485 (560)
9 PLN02736 long-chain acyl-CoA s 100.0 7.9E-60 1.7E-64 471.3 36.1 394 23-424 77-543 (651)
10 PRK06334 long chain fatty acid 100.0 4.1E-59 8.8E-64 456.4 39.3 384 23-424 44-471 (539)
11 PLN02654 acetate-CoA ligase 100.0 5.1E-59 1.1E-63 465.1 39.9 398 22-424 118-568 (666)
12 COG1022 FAA1 Long-chain acyl-C 100.0 2E-59 4.4E-64 444.7 34.6 384 19-424 40-505 (613)
13 PRK07788 acyl-CoA synthetase; 100.0 1.2E-58 2.5E-63 455.7 36.9 389 21-424 71-482 (549)
14 PTZ00237 acetyl-CoA synthetase 100.0 3.2E-58 6.9E-63 457.9 37.1 396 23-424 91-547 (647)
15 PRK07529 AMP-binding domain pr 100.0 2.2E-57 4.8E-62 451.8 42.6 398 21-424 55-500 (632)
16 TIGR02316 propion_prpE propion 100.0 2.6E-57 5.7E-62 451.6 40.2 396 22-424 81-527 (628)
17 PLN02387 long-chain-fatty-acid 100.0 9E-58 1.9E-62 457.5 36.3 396 23-424 105-591 (696)
18 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 4.3E-57 9.3E-62 450.7 40.8 394 23-424 87-530 (625)
19 PLN02246 4-coumarate--CoA liga 100.0 7.8E-57 1.7E-61 441.6 41.0 391 23-424 49-467 (537)
20 KOG1256 Long-chain acyl-CoA sy 100.0 1E-57 2.2E-62 426.8 32.6 399 21-424 105-583 (691)
21 PLN02860 o-succinylbenzoate-Co 100.0 1.6E-57 3.5E-62 448.3 35.9 398 14-424 21-469 (563)
22 PRK06060 acyl-CoA synthetase; 100.0 2.9E-57 6.2E-62 457.2 37.0 381 14-424 20-420 (705)
23 PRK00174 acetyl-CoA synthetase 100.0 2E-56 4.3E-61 446.6 42.6 394 23-424 97-538 (637)
24 PRK13295 cyclohexanecarboxylat 100.0 3.1E-56 6.8E-61 438.1 42.5 387 22-424 53-474 (547)
25 PRK04319 acetyl-CoA synthetase 100.0 2.5E-56 5.4E-61 440.7 40.6 389 22-424 71-487 (570)
26 PLN02330 4-coumarate--CoA liga 100.0 3.6E-56 7.9E-61 437.5 40.5 393 22-424 53-472 (546)
27 PRK09274 peptide synthase; Pro 100.0 3.6E-56 7.7E-61 438.5 38.2 381 24-424 41-475 (552)
28 PRK08314 long-chain-fatty-acid 100.0 9.1E-56 2E-60 435.4 40.8 403 14-424 24-471 (546)
29 PLN02430 long-chain-fatty-acid 100.0 5.8E-56 1.3E-60 441.9 37.0 396 24-424 76-549 (660)
30 PRK13382 acyl-CoA synthetase; 100.0 6.7E-56 1.4E-60 434.4 36.5 382 22-424 66-471 (537)
31 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 4.8E-55 1.1E-59 429.0 42.4 387 22-424 51-472 (538)
32 PRK07638 acyl-CoA synthetase; 100.0 7.6E-56 1.6E-60 429.8 36.1 382 13-424 14-416 (487)
33 PRK08316 acyl-CoA synthetase; 100.0 1.8E-55 3.8E-60 431.5 38.8 394 21-424 33-450 (523)
34 PRK06839 acyl-CoA synthetase; 100.0 2.1E-55 4.6E-60 428.1 38.8 379 21-424 24-426 (496)
35 PRK08180 feruloyl-CoA synthase 100.0 1.8E-55 3.8E-60 437.4 37.1 385 22-424 67-502 (614)
36 PRK07656 long-chain-fatty-acid 100.0 4.5E-55 9.8E-60 427.6 39.0 393 21-424 27-447 (513)
37 PRK05677 long-chain-fatty-acid 100.0 8.5E-55 1.8E-59 429.1 41.2 406 14-424 38-488 (562)
38 PRK10524 prpE propionyl-CoA sy 100.0 2.7E-55 5.9E-60 438.0 37.5 396 22-424 82-528 (629)
39 PRK05605 long-chain-fatty-acid 100.0 8.7E-55 1.9E-59 430.4 40.4 402 21-424 54-500 (573)
40 PTZ00216 acyl-CoA synthetase; 100.0 2.3E-55 5.1E-60 441.2 36.1 389 21-419 118-587 (700)
41 PRK07786 long-chain-fatty-acid 100.0 5.8E-54 1.3E-58 421.6 43.2 389 21-424 39-454 (542)
42 COG1021 EntE Peptide arylation 100.0 1.5E-56 3.3E-61 386.0 21.8 388 20-424 49-469 (542)
43 PLN03052 acetate--CoA ligase; 100.0 1.3E-54 2.8E-59 434.6 39.2 394 23-424 207-645 (728)
44 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 3.8E-54 8.3E-59 421.6 40.6 386 21-424 45-463 (527)
45 PRK03584 acetoacetyl-CoA synth 100.0 1.7E-54 3.6E-59 433.8 38.2 392 23-424 113-553 (655)
46 PRK09088 acyl-CoA synthetase; 100.0 3.3E-54 7.2E-59 418.5 38.8 373 22-424 20-416 (488)
47 PRK06087 short chain acyl-CoA 100.0 4.3E-54 9.2E-59 423.3 39.9 387 23-424 48-465 (547)
48 PRK06145 acyl-CoA synthetase; 100.0 7E-54 1.5E-58 417.3 40.7 385 21-424 24-428 (497)
49 PRK06155 crotonobetaine/carnit 100.0 1.3E-53 2.8E-58 418.4 41.3 385 21-424 43-455 (542)
50 PRK07514 malonyl-CoA synthase; 100.0 6.4E-54 1.4E-58 418.4 38.1 383 22-424 26-432 (504)
51 TIGR01217 ac_ac_CoA_syn acetoa 100.0 4.9E-54 1.1E-58 428.6 37.5 393 23-424 113-554 (652)
52 PRK08315 AMP-binding domain pr 100.0 1.3E-53 2.9E-58 421.2 40.0 392 22-424 41-482 (559)
53 PRK06187 long-chain-fatty-acid 100.0 1.2E-53 2.6E-58 418.5 39.3 392 21-424 28-450 (521)
54 PRK03640 O-succinylbenzoic aci 100.0 1.3E-53 2.8E-58 414.1 39.1 379 14-424 16-415 (483)
55 PRK05852 acyl-CoA synthetase; 100.0 1.5E-53 3.3E-58 418.1 39.3 389 23-424 42-463 (534)
56 PRK12583 acyl-CoA synthetase; 100.0 2.6E-53 5.6E-58 419.2 40.3 392 22-424 43-483 (558)
57 PRK05857 acyl-CoA synthetase; 100.0 6.5E-54 1.4E-58 420.6 35.7 384 22-424 39-457 (540)
58 PRK12582 acyl-CoA synthetase; 100.0 6.3E-54 1.4E-58 427.1 35.9 383 23-424 79-514 (624)
59 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.6E-53 7.8E-58 414.3 40.0 390 22-424 23-449 (515)
60 PRK08043 bifunctional acyl-[ac 100.0 1.1E-53 2.4E-58 431.4 36.9 379 22-424 229-646 (718)
61 PRK13383 acyl-CoA synthetase; 100.0 1.8E-53 3.9E-58 415.8 37.2 375 22-424 58-451 (516)
62 PRK07867 acyl-CoA synthetase; 100.0 4.5E-53 9.9E-58 413.1 39.9 377 22-424 26-436 (529)
63 PRK05851 long-chain-fatty-acid 100.0 3.5E-54 7.7E-59 421.0 32.1 376 22-424 29-450 (525)
64 PRK08633 2-acyl-glycerophospho 100.0 1.6E-53 3.4E-58 453.8 39.4 401 14-424 629-1076(1146)
65 PRK07008 long-chain-fatty-acid 100.0 4.6E-53 1E-57 414.7 39.6 394 22-424 37-464 (539)
66 PRK12467 peptide synthase; Pro 100.0 3.1E-54 6.6E-59 493.7 35.9 385 13-424 3108-3526(3956)
67 PRK12492 long-chain-fatty-acid 100.0 8E-53 1.7E-57 415.1 40.3 399 22-424 47-496 (562)
68 PRK07470 acyl-CoA synthetase; 100.0 7.4E-53 1.6E-57 412.9 39.5 389 21-424 29-449 (528)
69 PRK08008 caiC putative crotono 100.0 1.2E-52 2.7E-57 410.4 40.8 389 22-424 35-453 (517)
70 PRK13388 acyl-CoA synthetase; 100.0 6.6E-53 1.4E-57 413.3 38.8 383 14-424 15-435 (540)
71 TIGR01734 D-ala-DACP-lig D-ala 100.0 3.6E-53 7.9E-58 412.9 36.2 377 21-424 22-428 (502)
72 PRK10946 entE enterobactin syn 100.0 1.1E-52 2.4E-57 411.7 39.2 385 21-424 45-464 (536)
73 PRK06710 long-chain-fatty-acid 100.0 1.5E-52 3.2E-57 413.7 40.3 400 21-424 46-486 (563)
74 PRK07769 long-chain-fatty-acid 100.0 9.8E-54 2.1E-58 426.8 32.1 376 22-424 53-521 (631)
75 PRK07445 O-succinylbenzoic aci 100.0 3E-53 6.5E-58 405.3 33.3 345 24-424 19-379 (452)
76 TIGR01733 AA-adenyl-dom amino 100.0 1.5E-52 3.3E-57 398.0 37.5 372 26-422 1-408 (408)
77 PLN03102 acyl-activating enzym 100.0 1.3E-52 2.8E-57 414.0 38.2 398 15-424 29-475 (579)
78 TIGR02262 benz_CoA_lig benzoat 100.0 2E-52 4.4E-57 407.9 39.1 386 21-424 27-439 (508)
79 PRK07059 Long-chain-fatty-acid 100.0 3.9E-52 8.5E-57 410.1 40.6 400 21-424 45-490 (557)
80 PRK07787 acyl-CoA synthetase; 100.0 1.6E-52 3.4E-57 404.5 36.7 361 21-424 22-406 (471)
81 PRK06164 acyl-CoA synthetase; 100.0 4.1E-52 9E-57 408.8 38.4 393 21-424 32-461 (540)
82 PRK06178 acyl-CoA synthetase; 100.0 1.2E-51 2.6E-56 407.6 41.7 402 21-424 55-497 (567)
83 PRK12316 peptide synthase; Pro 100.0 7.4E-53 1.6E-57 489.3 38.4 386 14-424 525-941 (5163)
84 PRK06188 acyl-CoA synthetase; 100.0 7.5E-52 1.6E-56 405.4 39.7 385 22-424 35-448 (524)
85 PRK12476 putative fatty-acid-- 100.0 3.5E-53 7.6E-58 421.0 30.3 375 23-423 67-532 (612)
86 PRK10252 entF enterobactin syn 100.0 2.2E-52 4.8E-57 449.2 38.9 382 14-423 472-891 (1296)
87 TIGR03443 alpha_am_amid L-amin 100.0 1.4E-52 3.1E-57 452.3 37.1 389 21-423 267-732 (1389)
88 KOG1180 Acyl-CoA synthetase [L 100.0 1.8E-53 3.8E-58 381.4 24.6 395 24-424 89-571 (678)
89 PRK13390 acyl-CoA synthetase; 100.0 4.6E-52 1E-56 404.7 36.4 383 22-424 22-434 (501)
90 PRK12467 peptide synthase; Pro 100.0 1.5E-52 3.2E-57 479.9 38.2 386 14-424 1588-2009(3956)
91 PRK08279 long-chain-acyl-CoA s 100.0 4.6E-52 9.9E-57 412.8 36.4 396 14-424 51-494 (600)
92 PRK05620 long-chain-fatty-acid 100.0 8.4E-52 1.8E-56 409.0 37.8 397 22-424 36-485 (576)
93 PRK08751 putative long-chain f 100.0 2.6E-51 5.7E-56 404.7 40.6 406 15-424 40-492 (560)
94 TIGR03205 pimA dicarboxylate-- 100.0 4.3E-51 9.3E-56 401.3 41.8 399 22-424 44-476 (541)
95 PRK06018 putative acyl-CoA syn 100.0 2E-51 4.4E-56 403.5 39.5 394 22-424 37-465 (542)
96 PRK12316 peptide synthase; Pro 100.0 2.1E-52 4.6E-57 485.5 37.2 386 14-424 2017-2436(5163)
97 PLN02479 acetate-CoA ligase 100.0 2.4E-51 5.3E-56 404.7 38.5 397 22-424 43-485 (567)
98 PRK12406 long-chain-fatty-acid 100.0 3E-51 6.6E-56 399.7 38.7 393 21-424 8-434 (509)
99 PRK08974 long-chain-fatty-acid 100.0 2.9E-50 6.2E-55 397.1 42.7 400 21-424 45-487 (560)
100 PF00501 AMP-binding: AMP-bind 100.0 6.4E-52 1.4E-56 394.7 28.6 359 20-393 17-404 (417)
101 PRK06814 acylglycerophosphoeth 100.0 8.4E-51 1.8E-55 431.4 40.3 382 22-424 656-1065(1140)
102 PRK04813 D-alanine--poly(phosp 100.0 1.1E-50 2.3E-55 395.8 36.7 375 22-424 25-430 (503)
103 PRK08276 long-chain-fatty-acid 100.0 1.8E-50 3.9E-55 393.8 37.5 384 21-424 8-424 (502)
104 PRK09192 acyl-CoA synthetase; 100.0 2.8E-51 6.2E-56 405.3 32.3 381 22-424 47-495 (579)
105 PRK05691 peptide synthase; Val 100.0 4.2E-51 9.1E-56 471.7 38.6 383 14-423 1145-1559(4334)
106 PRK05691 peptide synthase; Val 100.0 4.1E-51 8.9E-56 471.8 36.1 390 13-423 3733-4156(4334)
107 PRK07868 acyl-CoA synthetase; 100.0 2.1E-50 4.6E-55 416.9 37.3 397 14-424 461-891 (994)
108 PLN03051 acyl-activating enzym 100.0 1.4E-50 3.1E-55 393.0 33.2 361 56-424 1-413 (499)
109 TIGR01923 menE O-succinylbenzo 100.0 8.4E-50 1.8E-54 382.4 37.2 355 26-424 1-375 (436)
110 PRK07768 long-chain-fatty-acid 100.0 4.4E-50 9.6E-55 394.7 35.7 378 22-423 27-468 (545)
111 PRK13391 acyl-CoA synthetase; 100.0 2.2E-49 4.8E-54 386.6 39.2 382 22-424 22-437 (511)
112 PRK08162 acyl-CoA synthetase; 100.0 5E-49 1.1E-53 387.4 40.3 394 22-424 41-471 (545)
113 PRK08308 acyl-CoA synthetase; 100.0 2.6E-49 5.7E-54 375.6 36.0 333 22-424 6-346 (414)
114 PRK05850 acyl-CoA synthetase; 100.0 1.1E-49 2.4E-54 394.4 32.8 382 22-423 33-489 (578)
115 PRK09029 O-succinylbenzoic aci 100.0 4.5E-49 9.7E-54 379.3 35.4 342 21-424 25-386 (458)
116 KOG1175 Acyl-CoA synthetase [L 100.0 3.9E-49 8.5E-54 370.3 29.8 395 25-424 97-530 (626)
117 PRK07798 acyl-CoA synthetase; 100.0 8.2E-48 1.8E-52 378.2 38.4 390 21-424 25-463 (533)
118 KOG1179 Very long-chain acyl-C 100.0 1.3E-47 2.8E-52 345.2 30.5 399 11-424 88-543 (649)
119 PTZ00297 pantothenate kinase; 100.0 1.3E-40 2.7E-45 344.7 32.9 376 22-424 455-892 (1452)
120 COG1020 EntF Non-ribosomal pep 100.0 1.6E-35 3.5E-40 296.8 34.3 374 14-415 241-642 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 1.3E-34 2.8E-39 269.7 25.2 233 159-424 32-288 (358)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 9.6E-32 2.1E-36 249.2 21.2 227 162-423 95-329 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 4.7E-31 1E-35 250.7 24.7 254 160-420 73-346 (422)
124 KOG3628 Predicted AMP-binding 100.0 3.9E-27 8.4E-32 226.5 25.0 403 6-423 783-1284(1363)
125 TIGR03335 F390_ftsA coenzyme F 100.0 8.4E-27 1.8E-31 221.6 23.4 247 160-416 84-354 (445)
126 TIGR03089 conserved hypothetic 99.9 4.9E-25 1.1E-29 189.5 19.5 200 24-255 27-227 (227)
127 COG1541 PaaK Coenzyme F390 syn 99.9 1.6E-23 3.4E-28 189.4 22.6 253 159-418 87-360 (438)
128 KOG1178 Non-ribosomal peptide 99.8 3E-20 6.5E-25 184.5 16.5 390 14-423 59-508 (1032)
129 KOG3628 Predicted AMP-binding 99.7 6.8E-16 1.5E-20 150.0 16.1 402 3-423 106-635 (1363)
130 TIGR02304 aden_form_hyp probab 99.6 5.9E-14 1.3E-18 130.9 20.7 232 165-422 102-363 (430)
131 PF04443 LuxE: Acyl-protein sy 99.2 7.1E-10 1.5E-14 101.3 18.7 219 161-390 88-331 (365)
132 PRK09188 serine/threonine prot 98.6 3E-08 6.4E-13 90.8 3.7 47 376-424 208-262 (365)
133 PF03321 GH3: GH3 auxin-respon 97.6 0.00011 2.4E-09 71.6 6.9 126 278-414 266-418 (528)
134 PLN02620 indole-3-acetic acid- 97.4 0.0091 2E-07 58.2 15.7 128 278-413 303-469 (612)
135 PLN02247 indole-3-acetic acid- 97.3 0.021 4.6E-07 55.8 17.5 129 278-413 292-463 (606)
136 PLN02249 indole-3-acetic acid- 97.2 0.035 7.6E-07 54.7 17.5 125 278-413 301-456 (597)
137 COG1541 PaaK Coenzyme F390 syn 96.2 0.039 8.4E-07 51.5 9.8 88 24-112 109-198 (438)
138 TIGR02155 PA_CoA_ligase phenyl 91.8 1.7 3.8E-05 41.4 10.6 85 25-110 95-181 (422)
139 TIGR03335 F390_ftsA coenzyme F 91.5 2.3 4.9E-05 41.0 11.0 79 25-106 106-186 (445)
140 PRK07656 long-chain-fatty-acid 83.8 5.4 0.00012 39.0 8.5 85 25-113 186-272 (513)
141 PRK06187 long-chain-fatty-acid 82.0 12 0.00027 36.5 10.3 85 25-113 187-272 (521)
142 PRK08315 AMP-binding domain pr 80.1 12 0.00025 37.3 9.4 83 25-110 219-303 (559)
143 PRK12583 acyl-CoA synthetase; 78.7 16 0.00035 36.2 10.0 83 24-109 220-304 (558)
144 TIGR03098 ligase_PEP_1 acyl-Co 77.1 18 0.0004 35.3 9.7 84 25-112 181-265 (515)
145 TIGR03089 conserved hypothetic 76.7 12 0.00027 32.1 7.4 54 42-97 171-226 (227)
146 PRK06334 long chain fatty acid 75.5 21 0.00045 35.4 9.6 84 25-111 203-288 (539)
147 PLN03051 acyl-activating enzym 75.1 18 0.00039 35.4 9.0 84 25-111 139-223 (499)
148 COG0399 WecE Predicted pyridox 73.7 18 0.0004 33.6 7.9 63 37-103 62-129 (374)
149 KOG1177 Long chain fatty acid 73.7 26 0.00056 33.5 8.7 88 22-112 251-340 (596)
150 PRK04319 acetyl-CoA synthetase 71.9 21 0.00046 35.6 8.8 85 25-112 225-311 (570)
151 TIGR01923 menE O-succinylbenzo 71.8 17 0.00038 34.5 7.9 83 24-112 130-213 (436)
152 TIGR01733 AA-adenyl-dom amino 70.3 38 0.00082 31.8 9.8 85 25-112 140-227 (408)
153 PRK06188 acyl-CoA synthetase; 66.1 50 0.0011 32.4 9.9 84 25-112 188-271 (524)
154 PF00501 AMP-binding: AMP-bind 66.1 58 0.0013 30.7 10.1 90 160-259 8-99 (417)
155 PLN02565 cysteine synthase 64.6 56 0.0012 29.9 9.1 66 40-105 56-122 (322)
156 PLN02736 long-chain acyl-CoA s 64.4 1.4E+02 0.0031 30.4 13.0 101 181-287 78-180 (651)
157 PRK10696 tRNA 2-thiocytidine b 63.9 82 0.0018 27.7 9.8 79 26-104 4-95 (258)
158 PRK07638 acyl-CoA synthetase; 63.9 48 0.001 32.2 9.3 85 25-113 163-248 (487)
159 PRK03640 O-succinylbenzoic aci 63.6 38 0.00082 32.8 8.5 83 25-111 161-244 (483)
160 PRK08316 acyl-CoA synthetase; 63.6 47 0.001 32.5 9.2 84 24-111 190-275 (523)
161 PRK05850 acyl-CoA synthetase; 63.1 91 0.002 31.1 11.3 86 180-267 34-123 (578)
162 TIGR03366 HpnZ_proposed putati 62.9 47 0.001 29.5 8.3 83 17-103 86-172 (280)
163 cd01445 TST_Repeats Thiosulfat 62.2 22 0.00049 27.7 5.3 42 35-76 81-125 (138)
164 PF01041 DegT_DnrJ_EryC1: DegT 61.8 27 0.0006 32.5 6.8 63 37-103 53-120 (363)
165 TIGR02379 ECA_wecE TDP-4-keto- 61.7 37 0.0008 31.9 7.6 58 42-103 64-126 (376)
166 PLN02860 o-succinylbenzoate-Co 61.7 57 0.0012 32.4 9.5 84 25-112 192-276 (563)
167 KOG0023 Alcohol dehydrogenase, 60.7 42 0.0009 30.4 7.1 68 40-110 173-240 (360)
168 PRK05852 acyl-CoA synthetase; 60.3 84 0.0018 30.9 10.4 85 25-112 196-283 (534)
169 PRK08043 bifunctional acyl-[ac 60.2 55 0.0012 33.9 9.3 82 24-108 384-467 (718)
170 PRK11706 TDP-4-oxo-6-deoxy-D-g 59.7 46 0.00099 31.2 7.9 57 43-103 65-126 (375)
171 PRK08308 acyl-CoA synthetase; 59.7 70 0.0015 30.2 9.4 85 24-112 120-206 (414)
172 PRK13295 cyclohexanecarboxylat 58.5 77 0.0017 31.3 9.8 83 25-111 217-301 (547)
173 PRK09274 peptide synthase; Pro 57.8 1.3E+02 0.0028 29.8 11.2 99 161-261 20-121 (552)
174 PTZ00342 acyl-CoA synthetase; 57.1 1.5E+02 0.0033 30.9 11.7 118 161-288 75-208 (746)
175 PRK11761 cysM cysteine synthas 56.4 79 0.0017 28.5 8.6 65 39-104 52-117 (296)
176 PRK07788 acyl-CoA synthetase; 56.2 61 0.0013 32.1 8.6 84 25-112 227-311 (549)
177 TIGR01139 cysK cysteine syntha 55.7 99 0.0021 27.8 9.1 64 41-105 48-112 (298)
178 TIGR02262 benz_CoA_lig benzoat 55.5 64 0.0014 31.5 8.6 84 25-110 181-266 (508)
179 PLN03052 acetate--CoA ligase; 55.2 1.5E+02 0.0033 30.8 11.4 100 160-262 188-289 (728)
180 TIGR02370 pyl_corrinoid methyl 55.1 1.3E+02 0.0027 25.3 10.9 91 206-298 85-184 (197)
181 PRK06164 acyl-CoA synthetase; 54.0 71 0.0015 31.5 8.7 84 25-112 201-285 (540)
182 PRK08314 long-chain-fatty-acid 53.2 62 0.0014 31.9 8.2 83 25-111 210-294 (546)
183 KOG1176 Acyl-CoA synthetase [L 53.2 91 0.002 30.9 8.9 91 179-271 43-137 (537)
184 COG1167 ARO8 Transcriptional r 52.7 39 0.00084 32.7 6.3 59 48-107 178-237 (459)
185 COG1064 AdhP Zn-dependent alco 52.0 61 0.0013 29.8 6.9 94 6-104 122-218 (339)
186 TIGR03590 PseG pseudaminic aci 51.4 1.1E+02 0.0024 27.2 8.6 67 32-104 18-88 (279)
187 PRK02261 methylaspartate mutas 50.9 1.2E+02 0.0026 23.7 8.1 85 215-302 15-111 (137)
188 PRK11493 sseA 3-mercaptopyruva 50.8 32 0.0007 30.7 5.1 52 24-75 201-257 (281)
189 PRK10252 entF enterobactin syn 50.2 1E+02 0.0022 34.5 9.9 83 25-110 618-703 (1296)
190 PLN02387 long-chain-fatty-acid 50.0 2.1E+02 0.0045 29.5 11.5 102 181-288 106-209 (696)
191 PRK07470 acyl-CoA synthetase; 49.2 1E+02 0.0022 30.2 8.9 87 25-112 183-270 (528)
192 PLN03013 cysteine synthase 48.9 1.2E+02 0.0026 29.0 8.6 65 41-105 165-230 (429)
193 TIGR03588 PseC UDP-4-keto-6-de 48.7 1E+02 0.0022 28.9 8.4 62 39-103 59-128 (380)
194 PRK07529 AMP-binding domain pr 48.7 1.7E+02 0.0036 29.7 10.5 98 161-261 39-137 (632)
195 PRK08633 2-acyl-glycerophospho 48.7 1E+02 0.0023 33.8 9.6 84 25-111 802-887 (1146)
196 COG2236 Predicted phosphoribos 48.2 30 0.00065 28.8 4.1 31 25-55 7-37 (192)
197 PRK07787 acyl-CoA synthetase; 47.9 1.3E+02 0.0028 29.1 9.2 82 25-111 148-231 (471)
198 PRK11658 UDP-4-amino-4-deoxy-L 47.3 87 0.0019 29.4 7.7 58 40-101 64-126 (379)
199 PRK08279 long-chain-acyl-CoA s 47.2 1.2E+02 0.0025 30.5 9.1 83 25-111 219-303 (600)
200 PLN00011 cysteine synthase 47.1 1.6E+02 0.0034 27.0 9.0 64 41-105 59-124 (323)
201 PRK13388 acyl-CoA synthetase; 46.8 2.5E+02 0.0053 27.8 11.2 83 181-265 26-111 (540)
202 COG0365 Acs Acyl-coenzyme A sy 46.6 1.5E+02 0.0033 29.3 9.2 98 165-267 27-126 (528)
203 PRK06839 acyl-CoA synthetase; 46.3 2.8E+02 0.0061 26.8 11.6 86 180-267 26-114 (496)
204 PRK07008 long-chain-fatty-acid 46.3 94 0.002 30.7 8.1 85 25-111 196-282 (539)
205 PRK13383 acyl-CoA synthetase; 46.3 1.6E+02 0.0036 28.7 9.8 72 40-112 208-280 (516)
206 PLN02246 4-coumarate--CoA liga 46.3 2.6E+02 0.0056 27.5 11.2 84 181-266 50-135 (537)
207 TIGR02275 DHB_AMP_lig 2,3-dihy 46.2 1.4E+02 0.003 29.3 9.3 83 25-111 203-288 (527)
208 TIGR01136 cysKM cysteine synth 46.2 1.6E+02 0.0034 26.6 8.9 64 41-105 49-113 (299)
209 PRK00174 acetyl-CoA synthetase 46.1 2.2E+02 0.0049 28.8 11.0 98 160-262 80-179 (637)
210 cd02069 methionine_synthase_B1 45.9 1.5E+02 0.0033 25.2 8.1 89 206-298 90-186 (213)
211 TIGR02188 Ac_CoA_lig_AcsA acet 45.7 2.1E+02 0.0045 29.0 10.6 98 160-262 70-169 (625)
212 PRK06702 O-acetylhomoserine am 45.3 1.1E+02 0.0025 29.3 8.0 17 241-257 299-316 (432)
213 PLN02861 long-chain-fatty-acid 45.2 2.9E+02 0.0063 28.2 11.6 87 181-269 77-165 (660)
214 PRK05620 long-chain-fatty-acid 45.2 1.3E+02 0.0029 29.9 9.1 85 25-110 201-286 (576)
215 KOG1179 Very long-chain acyl-C 45.0 93 0.002 30.7 7.2 84 25-112 262-347 (649)
216 PLN02654 acetate-CoA ligase 44.9 1.3E+02 0.0029 30.7 9.1 80 181-262 120-201 (666)
217 PTZ00237 acetyl-CoA synthetase 44.6 1.3E+02 0.0028 30.6 9.0 80 180-261 91-172 (647)
218 PRK03584 acetoacetyl-CoA synth 44.5 1.1E+02 0.0025 31.1 8.6 68 44-111 300-370 (655)
219 COG0031 CysK Cysteine synthase 44.2 2E+02 0.0042 26.0 8.7 69 35-104 43-116 (300)
220 cd01449 TST_Repeat_2 Thiosulfa 43.7 47 0.001 24.7 4.4 41 35-75 64-104 (118)
221 COG4009 Uncharacterized protei 43.6 1.1E+02 0.0023 21.1 5.3 66 23-99 8-76 (88)
222 TIGR03595 Obg_CgtA_exten Obg f 43.3 23 0.0005 23.8 2.2 19 37-55 45-63 (69)
223 PRK10946 entE enterobactin syn 42.9 1.4E+02 0.0029 29.5 8.7 83 25-111 202-287 (536)
224 PLN02556 cysteine synthase/L-3 42.8 1.7E+02 0.0037 27.4 8.6 62 43-104 103-165 (368)
225 cd01519 RHOD_HSP67B2 Member of 42.8 61 0.0013 23.5 4.8 51 25-75 38-92 (106)
226 TIGR03208 cyc_hxne_CoA_lg cycl 42.4 1.6E+02 0.0036 28.9 9.2 82 25-110 215-298 (538)
227 PF07994 NAD_binding_5: Myo-in 42.2 2.3E+02 0.0049 25.6 8.9 72 25-98 126-227 (295)
228 PF09269 DUF1967: Domain of un 42.2 18 0.00039 24.3 1.6 19 36-54 44-62 (69)
229 cd04910 ACT_AK-Ectoine_1 ACT d 42.1 81 0.0018 21.4 4.7 51 243-308 19-69 (71)
230 TIGR01217 ac_ac_CoA_syn acetoa 41.8 1.5E+02 0.0032 30.2 8.9 95 162-262 99-195 (652)
231 PLN02574 4-coumarate--CoA liga 41.8 3.5E+02 0.0076 26.8 11.4 85 181-267 66-153 (560)
232 COG0318 CaiC Acyl-CoA syntheta 41.7 1.9E+02 0.0042 28.6 9.5 88 24-112 190-280 (534)
233 PRK15407 lipopolysaccharide bi 41.6 1.2E+02 0.0026 29.1 7.7 55 45-103 107-166 (438)
234 cd07050 BMC_EutL_repeat2 ethan 41.4 42 0.0009 23.1 3.1 40 38-77 3-43 (87)
235 COG4821 Uncharacterized protei 41.3 94 0.002 26.0 5.7 55 30-105 85-140 (243)
236 PRK05857 acyl-CoA synthetase; 41.1 2.7E+02 0.0059 27.4 10.5 81 181-263 41-123 (540)
237 PLN02723 3-mercaptopyruvate su 41.0 53 0.0011 30.0 5.0 51 25-75 239-295 (320)
238 PRK02261 methylaspartate mutas 40.9 1.7E+02 0.0038 22.8 7.4 43 62-104 20-62 (137)
239 TIGR02822 adh_fam_2 zinc-bindi 40.8 1.6E+02 0.0034 26.9 8.2 84 15-102 129-215 (329)
240 PRK07786 long-chain-fatty-acid 40.6 2E+02 0.0043 28.4 9.4 85 25-112 194-281 (542)
241 TIGR01138 cysM cysteine syntha 40.4 2.4E+02 0.0053 25.3 9.1 62 42-104 51-113 (290)
242 cd02067 B12-binding B12 bindin 40.1 1.3E+02 0.0029 22.4 6.4 41 64-104 18-58 (119)
243 PRK05677 long-chain-fatty-acid 39.9 3.2E+02 0.007 27.1 10.9 83 181-265 49-134 (562)
244 PRK07769 long-chain-fatty-acid 39.8 4.1E+02 0.009 26.8 12.2 83 181-265 55-141 (631)
245 PRK08008 caiC putative crotono 39.2 3.7E+02 0.0081 26.1 12.6 100 161-266 21-122 (517)
246 TIGR01734 D-ala-DACP-lig D-ala 39.2 1.8E+02 0.004 28.2 8.9 83 25-110 161-246 (502)
247 PLN02330 4-coumarate--CoA liga 38.9 3.3E+02 0.0072 26.8 10.8 83 181-265 55-139 (546)
248 PLN02614 long-chain acyl-CoA s 38.8 2.6E+02 0.0057 28.6 10.2 86 181-268 79-166 (666)
249 PRK13237 tyrosine phenol-lyase 38.7 2.4E+02 0.0052 27.3 8.9 69 23-96 76-174 (460)
250 PRK08751 putative long-chain f 38.6 2.3E+02 0.0051 28.0 9.6 83 181-265 50-135 (560)
251 cd08281 liver_ADH_like1 Zinc-d 38.6 1.8E+02 0.0038 27.1 8.3 86 14-103 153-243 (371)
252 TIGR02316 propion_prpE propion 38.5 1.9E+02 0.0041 29.3 9.1 96 161-261 66-163 (628)
253 PF03808 Glyco_tran_WecB: Glyc 38.5 60 0.0013 26.5 4.5 77 230-312 4-81 (172)
254 PRK12476 putative fatty-acid-- 38.5 2.7E+02 0.0058 28.1 10.1 102 161-266 48-155 (612)
255 PLN02430 long-chain-fatty-acid 38.3 4.2E+02 0.009 27.1 11.5 102 181-287 76-179 (660)
256 cd06448 L-Ser-dehyd Serine deh 38.0 88 0.0019 28.5 5.9 62 43-105 45-106 (316)
257 PRK09162 hypoxanthine-guanine 37.9 96 0.0021 25.6 5.6 47 23-70 15-61 (181)
258 PRK10717 cysteine synthase A; 37.7 2.3E+02 0.005 26.0 8.7 63 42-105 56-119 (330)
259 TIGR01137 cysta_beta cystathio 37.6 2.1E+02 0.0046 27.6 8.9 62 42-104 54-116 (454)
260 PRK05605 long-chain-fatty-acid 37.5 2.7E+02 0.0058 27.7 9.9 85 181-267 57-143 (573)
261 cd02070 corrinoid_protein_B12- 37.4 2.5E+02 0.0054 23.5 9.9 81 24-104 50-141 (201)
262 PF08967 DUF1884: Domain of un 37.2 54 0.0012 22.7 3.2 70 29-114 9-78 (85)
263 PRK06814 acylglycerophosphoeth 37.2 2.1E+02 0.0044 31.6 9.7 84 25-111 813-898 (1140)
264 PRK04813 D-alanine--poly(phosp 37.2 2.9E+02 0.0062 26.7 9.9 83 24-109 162-247 (503)
265 COG1022 FAA1 Long-chain acyl-C 37.1 1.6E+02 0.0035 29.7 7.9 85 24-112 210-295 (613)
266 PRK06381 threonine synthase; V 37.1 1E+02 0.0022 28.1 6.2 56 50-106 64-119 (319)
267 KOG0025 Zn2+-binding dehydroge 36.5 1.2E+02 0.0026 27.2 6.0 65 45-109 157-222 (354)
268 PRK06155 crotonobetaine/carnit 36.3 3.3E+02 0.0072 26.9 10.3 86 181-268 46-133 (542)
269 cd00640 Trp-synth-beta_II Tryp 36.0 2.9E+02 0.0062 23.9 9.4 65 41-106 42-106 (244)
270 PLN03102 acyl-activating enzym 36.0 2.7E+02 0.0059 27.8 9.6 83 181-265 39-123 (579)
271 TIGR02372 4_coum_CoA_lig 4-cou 36.0 3.1E+02 0.0068 25.8 9.4 82 24-111 114-199 (386)
272 PRK07867 acyl-CoA synthetase; 35.9 3.1E+02 0.0067 27.0 9.9 83 181-265 28-113 (529)
273 TIGR03443 alpha_am_amid L-amin 35.2 3.1E+02 0.0068 31.0 10.8 99 160-260 249-349 (1389)
274 PRK06087 short chain acyl-CoA 35.1 3.6E+02 0.0077 26.6 10.3 78 181-260 49-128 (547)
275 PRK07798 acyl-CoA synthetase; 35.0 4.4E+02 0.0094 25.7 11.6 86 181-268 28-115 (533)
276 cd01561 CBS_like CBS_like: Thi 35.0 2.9E+02 0.0063 24.7 8.8 65 41-106 44-109 (291)
277 PRK07514 malonyl-CoA synthase; 34.6 3.3E+02 0.0071 26.4 9.9 84 181-266 28-113 (504)
278 PTZ00271 hypoxanthine-guanine 34.3 2.3E+02 0.0049 24.1 7.3 20 25-44 28-47 (211)
279 KOG1250 Threonine/serine dehyd 34.3 2.4E+02 0.0051 26.6 7.7 53 54-106 118-170 (457)
280 PRK10595 SOS cell division inh 34.2 1.5E+02 0.0032 24.0 5.9 14 89-102 99-112 (164)
281 PRK10524 prpE propionyl-CoA sy 34.0 2.4E+02 0.0052 28.5 9.0 96 161-261 67-164 (629)
282 KOG1138 Predicted cleavage and 33.8 73 0.0016 30.6 4.6 66 44-109 413-479 (653)
283 PRK13391 acyl-CoA synthetase; 33.8 4.6E+02 0.0099 25.5 11.5 99 160-267 10-110 (511)
284 COG0604 Qor NADPH:quinone redu 33.2 3.3E+02 0.0072 24.9 8.9 95 16-114 106-207 (326)
285 cd01448 TST_Repeat_1 Thiosulfa 33.2 1.5E+02 0.0032 22.2 5.7 41 35-75 65-106 (122)
286 PRK08276 long-chain-fatty-acid 33.0 3.9E+02 0.0084 25.9 10.1 85 181-267 11-97 (502)
287 PRK09422 ethanol-active dehydr 32.6 2.2E+02 0.0048 25.8 7.9 82 19-103 130-214 (338)
288 PRK05939 hypothetical protein; 32.5 2.1E+02 0.0045 27.1 7.7 12 92-103 106-117 (397)
289 cd08239 THR_DH_like L-threonin 32.2 2.4E+02 0.0053 25.6 8.1 84 16-103 128-215 (339)
290 PRK06060 acyl-CoA synthetase; 32.1 1.9E+02 0.0042 29.7 8.1 85 25-111 165-251 (705)
291 PLN02356 phosphateglycerate ki 32.1 2.7E+02 0.0058 26.7 8.2 62 41-103 95-157 (423)
292 cd02071 MM_CoA_mut_B12_BD meth 32.0 2.2E+02 0.0049 21.4 6.5 41 64-104 18-58 (122)
293 PRK07476 eutB threonine dehydr 31.8 2.6E+02 0.0057 25.5 8.0 50 57-106 74-123 (322)
294 cd00615 Orn_deC_like Ornithine 31.6 2.2E+02 0.0049 25.4 7.5 55 46-103 96-161 (294)
295 PRK15400 lysine decarboxylase 31.3 1.5E+02 0.0032 30.5 6.7 59 46-107 232-309 (714)
296 PF11142 DUF2917: Protein of u 31.0 1.1E+02 0.0023 20.1 3.9 30 362-393 25-54 (63)
297 PRK12406 long-chain-fatty-acid 30.9 3.2E+02 0.007 26.5 9.1 68 43-111 190-258 (509)
298 PRK06145 acyl-CoA synthetase; 30.2 3.7E+02 0.0081 26.0 9.4 84 25-112 169-254 (497)
299 cd02070 corrinoid_protein_B12- 29.8 3.3E+02 0.0072 22.8 12.5 90 206-297 84-181 (201)
300 PRK08162 acyl-CoA synthetase; 29.8 3.8E+02 0.0082 26.4 9.5 85 181-267 43-129 (545)
301 PF08479 POTRA_2: POTRA domain 29.0 84 0.0018 21.4 3.3 27 21-47 27-53 (76)
302 PRK10287 thiosulfate:cyanide s 29.0 2E+02 0.0044 21.1 5.5 48 25-79 43-90 (104)
303 TIGR00936 ahcY adenosylhomocys 28.9 2.9E+02 0.0062 26.3 7.7 64 40-103 23-88 (406)
304 PRK08974 long-chain-fatty-acid 28.6 3.5E+02 0.0076 26.8 9.0 81 181-263 48-131 (560)
305 PF02350 Epimerase_2: UDP-N-ac 28.4 3.5E+02 0.0075 25.1 8.2 84 28-115 50-142 (346)
306 PF06543 Lac_bphage_repr: Lact 28.4 46 0.001 20.2 1.6 23 282-304 22-44 (49)
307 smart00450 RHOD Rhodanese Homo 28.2 1.9E+02 0.0041 20.0 5.4 40 36-75 43-82 (100)
308 PRK09177 xanthine-guanine phos 28.1 1.9E+02 0.0041 23.1 5.7 36 25-62 10-45 (156)
309 PRK10411 DNA-binding transcrip 28.1 3.5E+02 0.0075 23.5 7.7 88 227-322 90-184 (240)
310 PLN02409 serine--glyoxylate am 28.0 2.9E+02 0.0063 26.1 7.9 75 28-103 38-114 (401)
311 PRK05851 long-chain-fatty-acid 27.9 3.9E+02 0.0084 26.2 9.1 76 25-103 172-252 (525)
312 COG2897 SseA Rhodanese-related 27.9 2E+02 0.0043 25.8 6.2 55 23-77 202-262 (285)
313 PRK14807 histidinol-phosphate 27.8 4E+02 0.0087 24.5 8.7 31 70-102 97-127 (351)
314 PRK07768 long-chain-fatty-acid 27.8 2.8E+02 0.006 27.4 8.1 77 25-104 172-254 (545)
315 PRK06382 threonine dehydratase 27.7 3.1E+02 0.0068 26.0 8.0 51 56-106 79-129 (406)
316 PRK06178 acyl-CoA synthetase; 27.7 4.7E+02 0.01 25.9 9.7 86 181-268 58-145 (567)
317 PRK09088 acyl-CoA synthetase; 27.5 5.6E+02 0.012 24.6 10.6 79 181-261 22-102 (488)
318 PRK07059 Long-chain-fatty-acid 27.2 4.6E+02 0.01 25.9 9.6 83 181-265 48-132 (557)
319 PRK10083 putative oxidoreducta 27.2 3E+02 0.0066 24.9 7.8 82 18-103 128-213 (339)
320 PF00818 Ice_nucleation: Ice n 27.0 32 0.00069 15.6 0.6 9 311-319 1-9 (16)
321 PF00455 DeoRC: DeoR C termina 26.9 3.3E+02 0.0072 21.8 8.0 91 225-323 14-112 (161)
322 cd08301 alcohol_DH_plants Plan 26.9 3.6E+02 0.0078 25.0 8.3 83 17-103 152-239 (369)
323 KOG1256 Long-chain acyl-CoA sy 26.9 7.1E+02 0.015 25.6 12.4 150 161-318 89-241 (691)
324 cd03466 Nitrogenase_NifN_2 Nit 26.6 5.1E+02 0.011 24.9 9.2 56 48-104 299-358 (429)
325 PRK08246 threonine dehydratase 26.6 4.4E+02 0.0095 23.9 8.4 58 48-106 67-124 (310)
326 PLN02740 Alcohol dehydrogenase 26.5 2.1E+02 0.0045 26.8 6.6 82 17-102 163-249 (381)
327 PRK09331 Sep-tRNA:Cys-tRNA syn 26.4 3.6E+02 0.0079 25.3 8.2 55 46-103 99-165 (387)
328 PRK12492 long-chain-fatty-acid 26.3 3.4E+02 0.0074 26.9 8.4 87 25-111 227-322 (562)
329 PRK08574 cystathionine gamma-s 26.2 2.9E+02 0.0062 26.1 7.4 25 293-317 310-334 (385)
330 PLN02238 hypoxanthine phosphor 26.2 1.9E+02 0.0041 24.1 5.5 21 24-44 11-31 (189)
331 TIGR03201 dearomat_had 6-hydro 26.0 3.6E+02 0.0078 24.7 8.1 75 24-102 139-216 (349)
332 PRK14185 bifunctional 5,10-met 25.8 4.7E+02 0.01 23.6 8.1 75 28-102 11-95 (293)
333 TIGR00623 sula cell division i 25.3 2.2E+02 0.0048 23.1 5.4 76 24-103 34-117 (168)
334 KOG0391 SNF2 family DNA-depend 25.0 2.1E+02 0.0045 31.3 6.4 66 33-99 1261-1326(1958)
335 PF04122 CW_binding_2: Putativ 25.0 2.5E+02 0.0055 19.8 7.8 68 31-101 9-77 (92)
336 cd06451 AGAT_like Alanine-glyo 24.9 3.7E+02 0.0081 24.6 8.0 78 25-103 25-104 (356)
337 cd01563 Thr-synth_1 Threonine 24.8 2.2E+02 0.0047 26.0 6.2 57 49-106 70-126 (324)
338 PRK09880 L-idonate 5-dehydroge 24.8 3.7E+02 0.008 24.6 7.8 80 18-102 137-220 (343)
339 cd01019 ZnuA Zinc binding prot 24.8 2.8E+02 0.006 24.8 6.7 59 50-108 179-240 (286)
340 PRK14665 mnmA tRNA-specific 2- 24.6 2.3E+02 0.0049 26.5 6.2 59 46-104 2-68 (360)
341 cd01562 Thr-dehyd Threonine de 24.2 2.8E+02 0.0061 24.9 6.8 55 50-105 66-120 (304)
342 TIGR02080 O_succ_thio_ly O-suc 24.1 3.5E+02 0.0076 25.4 7.6 38 66-103 83-122 (382)
343 PF02606 LpxK: Tetraacyldisacc 23.9 4.8E+02 0.01 24.0 8.1 46 75-121 108-153 (326)
344 cd02069 methionine_synthase_B1 23.9 4.5E+02 0.0098 22.3 10.6 81 24-104 54-147 (213)
345 PLN02479 acetate-CoA ligase 23.8 7.2E+02 0.016 24.6 10.3 83 181-265 45-129 (567)
346 cd08277 liver_alcohol_DH_like 23.7 3.6E+02 0.0077 25.0 7.6 84 16-103 148-236 (365)
347 PTZ00216 acyl-CoA synthetase; 23.7 6E+02 0.013 26.2 9.8 89 179-269 119-209 (700)
348 PTZ00297 pantothenate kinase; 23.7 2.9E+02 0.0063 31.4 7.7 81 24-109 620-702 (1452)
349 PLN02384 ribose-5-phosphate is 23.6 74 0.0016 28.0 2.7 36 385-420 204-241 (264)
350 COG1205 Distinct helicase fami 23.6 6.9E+02 0.015 26.6 10.1 81 206-286 116-201 (851)
351 PRK06710 long-chain-fatty-acid 23.6 4.4E+02 0.0096 26.1 8.7 82 181-264 49-132 (563)
352 TIGR02618 tyr_phenol_ly tyrosi 23.5 6E+02 0.013 24.6 8.8 69 23-96 69-167 (450)
353 cd01137 PsaA Metal binding pro 23.5 2.7E+02 0.0059 24.9 6.4 81 29-109 154-239 (287)
354 PRK04870 histidinol-phosphate 23.2 3.2E+02 0.0069 25.2 7.1 63 35-103 70-133 (356)
355 PRK13382 acyl-CoA synthetase; 23.0 4.9E+02 0.011 25.6 8.8 84 25-112 216-300 (537)
356 cd08300 alcohol_DH_class_III c 23.0 3E+02 0.0065 25.5 7.0 85 15-103 149-238 (368)
357 KOG1794 N-Acetylglucosamine ki 22.9 2.4E+02 0.0053 25.3 5.6 82 278-364 68-151 (336)
358 TIGR02981 phageshock_pspE phag 22.9 2.9E+02 0.0063 20.1 5.4 48 25-79 41-88 (101)
359 TIGR02818 adh_III_F_hyde S-(hy 22.8 5.7E+02 0.012 23.7 8.8 84 15-102 148-236 (368)
360 PF00156 Pribosyltran: Phospho 22.6 2.1E+02 0.0046 21.3 4.9 26 25-50 5-30 (125)
361 PLN02586 probable cinnamyl alc 22.5 3.7E+02 0.008 24.9 7.4 84 16-102 147-234 (360)
362 PRK11493 sseA 3-mercaptopyruva 22.4 2.3E+02 0.005 25.2 5.8 49 33-81 71-121 (281)
363 PRK06018 putative acyl-CoA syn 22.3 5.3E+02 0.012 25.4 8.9 83 181-265 39-123 (542)
364 PLN02723 3-mercaptopyruvate su 22.1 2.3E+02 0.0049 25.9 5.7 48 35-82 89-138 (320)
365 PF07722 Peptidase_C26: Peptid 22.0 91 0.002 26.6 2.9 36 65-102 29-64 (217)
366 COG1832 Predicted CoA-binding 21.7 1.9E+02 0.004 22.6 4.2 33 56-88 26-58 (140)
367 PRK12723 flagellar biosynthesi 21.7 4.2E+02 0.009 25.1 7.4 79 25-103 145-240 (388)
368 KOG1252 Cystathionine beta-syn 21.6 5.3E+02 0.011 23.8 7.5 61 45-105 99-159 (362)
369 cd01016 TroA Metal binding pro 21.5 3E+02 0.0065 24.5 6.3 61 48-108 159-222 (276)
370 PRK15399 lysine decarboxylase 21.5 2.9E+02 0.0064 28.5 6.7 58 46-106 232-308 (713)
371 TIGR00649 MG423 conserved hypo 21.4 3.7E+02 0.0081 25.6 7.3 61 45-105 315-384 (422)
372 PRK12582 acyl-CoA synthetase; 21.4 4.9E+02 0.011 26.3 8.6 79 181-261 80-165 (624)
373 TIGR01203 HGPRTase hypoxanthin 21.3 3E+02 0.0065 22.2 5.7 20 25-44 3-22 (166)
374 COG5012 Predicted cobalamin bi 21.2 5.3E+02 0.012 22.1 8.8 81 215-299 116-205 (227)
375 PRK07503 methionine gamma-lyas 21.2 4.3E+02 0.0094 25.0 7.6 24 294-317 323-346 (403)
376 cd08264 Zn_ADH_like2 Alcohol d 21.2 6E+02 0.013 22.7 8.8 78 19-103 130-210 (325)
377 PF04915 DltD_N: DltD N-termin 21.1 62 0.0014 21.2 1.3 15 304-318 26-40 (62)
378 cd01520 RHOD_YbbB Member of th 21.0 3.8E+02 0.0082 20.3 6.1 39 44-82 81-120 (128)
379 PRK14057 epimerase; Provisiona 21.0 5.8E+02 0.013 22.5 8.7 63 37-102 90-162 (254)
380 PF05221 AdoHcyase: S-adenosyl 21.0 4.3E+02 0.0093 23.4 6.7 59 45-103 39-99 (268)
381 PRK06234 methionine gamma-lyas 20.7 5.3E+02 0.011 24.4 8.1 24 294-317 324-347 (400)
382 PRK06721 threonine synthase; R 20.6 3.3E+02 0.0071 25.3 6.5 50 57-106 82-132 (352)
383 PRK08813 threonine dehydratase 20.6 6.7E+02 0.014 23.3 8.4 54 54-107 85-138 (349)
384 PRK07445 O-succinylbenzoic aci 20.3 6.5E+02 0.014 24.2 8.8 77 183-261 21-100 (452)
385 cd08246 crotonyl_coA_red croto 20.2 5.6E+02 0.012 23.9 8.3 81 19-102 158-244 (393)
386 PF01276 OKR_DC_1: Orn/Lys/Arg 20.0 1.8E+02 0.004 27.7 4.7 59 46-107 103-180 (417)
387 COG0796 MurI Glutamate racemas 20.0 4.2E+02 0.009 23.5 6.5 54 7-65 30-83 (269)
388 COG0436 Aspartate/tyrosine/aro 20.0 3.7E+02 0.008 25.5 6.8 71 31-103 68-141 (393)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-67 Score=494.53 Aligned_cols=393 Identities=39% Similarity=0.617 Sum_probs=337.9
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcC--CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLG--ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~g--i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 99 (424)
.+.+||+|+++++.|+|..|.++| +++||+|++++||++++..+++||..+|+++.++||.+.+.++.+.++.+++++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ki 122 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKL 122 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeE
Confidence 367999999999999999999876 899999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccchHHHhcCC----CCeEEEecCCCccccccccCCCcccc-hhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCC
Q 014435 100 VITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVS-FHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTT 174 (424)
Q Consensus 100 ii~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 174 (424)
++++.+....+.... ...+.+....... .......... +..+.....+ .. ......+|+++++||||||
T Consensus 123 if~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~dd~~~il~SSGTT 196 (537)
T KOG1176|consen 123 IFVDEDFYDKISEATSKLALKIIVLTGDEGVI---SISDLVEDLDAFEDLMPEGLP--DG-IRPVSEDDTAAILYSSGTT 196 (537)
T ss_pred EEEcCchHHHHHHHHhhcCCceEEEecccCcc---ccccccccccchhhccccCCC--cc-cccCCCCCeEEEecCCCCC
Confidence 999999988876654 3333333321000 0011111111 4443333321 11 4556679999999999999
Q ss_pred CCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccc
Q 014435 175 GVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRV 254 (424)
Q Consensus 175 G~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~ 254 (424)
|.||+|++||+++..+............ .++.++.+|++|.+|+...+...+..|++++..+.+++..+++.+++|++
T Consensus 197 g~PKgV~lsHr~~~~~~~~~~~~~~~~~--~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykv 274 (537)
T KOG1176|consen 197 GLPKGVVLSHRNLIANTLSIKIGWELTS--DDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKV 274 (537)
T ss_pred CCCceEEEecHHHHHHHHHhhhcccCCC--CceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCE
Confidence 9999999999999888655444444433 59999999999999998777778899999999999999999999999999
Q ss_pred eEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCC
Q 014435 255 TVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSG 334 (424)
Q Consensus 255 t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 334 (424)
|++.++|.++..|++.+.....+++++|.+.+||+++++++.+++++.++...+.+.||+||+++.++.+..... .+++
T Consensus 275 t~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e-~k~~ 353 (537)
T KOG1176|consen 275 THLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE-RKPG 353 (537)
T ss_pred EEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc-Cccc
Confidence 999999999999999987777899999999999999999999999999987999999999999988887666643 6899
Q ss_pred ccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e
Q 014435 335 SAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D 394 (424)
Q Consensus 335 ~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d 394 (424)
++|.++++++.+|.+ ++|+.+++++.||||++|+.++.|| ++||+|||+|++|+||++ |
T Consensus 354 svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~Kd 432 (537)
T KOG1176|consen 354 SVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKD 432 (537)
T ss_pred ccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhh
Confidence 999999988888888 8999999999999999999999999 399999999999999998 4
Q ss_pred -eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 395 -FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 395 -i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|+.+|++|+|.|||++|.+||.|.||||||
T Consensus 433 lIk~~G~qv~P~EiE~vL~~hP~V~eaaVvg 463 (537)
T KOG1176|consen 433 LIKYGGEQVSPAEIEAVLLTHPDVLEAAVVG 463 (537)
T ss_pred heeeCCEEeCHHHHHHHHHhCCCccEEEEEc
Confidence 999999999999999999999999999997
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-64 Score=444.15 Aligned_cols=393 Identities=25% Similarity=0.338 Sum_probs=337.5
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.+.++||+|+.+.++++|+.|...|+++||||++..||+++|+.+++||+++|.+.+++||.+...+++..|++.+++++
T Consensus 74 eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l 153 (596)
T KOG1177|consen 74 EGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKAL 153 (596)
T ss_pred ccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEE
Confidence 44569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccch-----HHHhcCCC------------------CeEEEecCCCccccccccCCCcccchhhhhhccCCCC----C
Q 014435 101 ITVPELW-----DKVKDLNL------------------PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT----D 153 (424)
Q Consensus 101 i~~~~~~-----~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 153 (424)
++.+.+. +.+.++.. .-++...++ ....+...+++++....... .
T Consensus 154 ~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed--------~~~~Ga~~~sev~~~~s~~~~a~l~ 225 (596)
T KOG1177|consen 154 FAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADED--------HPLPGAFLLSEVLKAASKEERAKLA 225 (596)
T ss_pred EccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCC--------CcCCCceehHHHHHhcchHHHHHHH
Confidence 9986433 22322211 112222211 22334455666665544311 1
Q ss_pred CCCCCCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCce
Q 014435 154 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 233 (424)
Q Consensus 154 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 233 (424)
.......|||++.|.|||||||.||++.+||.++++++.......++.. ++++++..|++|.+|.....++++..|++
T Consensus 226 ~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e--~~~i~~~~Pl~H~~G~~~~~ma~l~~gat 303 (596)
T KOG1177|consen 226 DMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNE--KHRICIPNPLYHCFGCVLGVMAALMHGAT 303 (596)
T ss_pred hhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCc--ceEEEecCchHHHHHHHHHHHHHHHhCcE
Confidence 1233456899999999999999999999999999999888877776644 48999999999999988899999999999
Q ss_pred EEecC-CCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecc
Q 014435 234 VVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 312 (424)
Q Consensus 234 ~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~y 312 (424)
++++. .|++.+++++|+++++|.++++|+++..|++.+.....+++++|..+.||+++|+++.+.+.+...=..+...|
T Consensus 304 ~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~Y 383 (596)
T KOG1177|consen 304 IVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAY 383 (596)
T ss_pred EEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEe
Confidence 99974 59999999999999999999999999999999998999999999999999999999999999976334577789
Q ss_pred cCccCCCceeecCCCC-CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhc
Q 014435 313 GMTETCAPISLENPLV-GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELT 378 (424)
Q Consensus 313 G~tE~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~ 378 (424)
|+||+++..+.....+ .+.+..++|+.+++.+..|+| +.|..++.|..|||+++|.+.+.+| |.|
T Consensus 384 G~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW 462 (596)
T KOG1177|consen 384 GLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRW 462 (596)
T ss_pred eccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEechhheeecCCcccchhhcccccc
Confidence 9999998777654443 356677999999999999999 8999999999999999999999999 899
Q ss_pred cccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 379 VNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 379 ~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++|||+|.++++|.+ | |..+|++|+|.|||+.|.+||.|.+|.|+|
T Consensus 463 ~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVG 516 (596)
T KOG1177|consen 463 YDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVG 516 (596)
T ss_pred eecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEc
Confidence 999999999999988 4 778999999999999999999999999997
No 3
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=5.4e-63 Score=463.00 Aligned_cols=379 Identities=25% Similarity=0.381 Sum_probs=325.2
Q ss_pred CCCcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~-~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
+++||+||.+.++++|+.|++ .|+ +||||++++|+.++.++++|||+++|++.+|+.+.++++.+...+++++++++|
T Consensus 39 ~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vi 117 (528)
T COG0365 39 RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLI 117 (528)
T ss_pred eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEE
Confidence 679999999999999999987 568 999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCCCe--------EEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCC
Q 014435 102 TVPELWDKVKDLNLPA--------VLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGT 173 (424)
Q Consensus 102 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 173 (424)
+++......+...... +++.... . ..|.+...... ...+......+|+++++|||||
T Consensus 118 t~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~------------~-~~~~~~~~~~~--~~~~~~~~~~~dpl~ilYTSGT 182 (528)
T COG0365 118 ADDGTFRNGKEIALLEDADAVLSSVVVVPRL------------G-LWYDEAVEKAS--EKFEFEPLPADDPLFLLYTSGT 182 (528)
T ss_pred EecccccccccccchhHHHHhhcceEEeccc------------c-ccHHHHhhccC--CCCCccccCCCCeEEEEeCCCC
Confidence 9988777655544321 2222111 1 56666665444 3333445789999999999999
Q ss_pred CCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC--C-CHHHHHHHHH
Q 014435 174 TGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK--F-DIEMALRAIE 250 (424)
Q Consensus 174 TG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~-~~~~~~~~i~ 250 (424)
||+||+|+++|+.+............... ++|++++..+..|+.|.++.++.+|..|+++++.+. + ++..+++.|+
T Consensus 183 TG~PKgv~H~~gg~l~~~~~~~~~~~~~~-~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie 261 (528)
T COG0365 183 TGKPKGIVHSHGGYLVEHRLTAKFHGDLL-PGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALE 261 (528)
T ss_pred CCCCceEEEeCchHHHHHHHHHHHhhCCC-CCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHH
Confidence 99999999999987776655544333322 569999999999999999889999999999998853 2 4999999999
Q ss_pred HccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCc
Q 014435 251 KYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGV 330 (424)
Q Consensus 251 ~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~ 330 (424)
++++|.+++.|+.++.|.+....+..++++||.+.+.|||++++.++++.+.+ |+.+.+.||+||++++.....+ .
T Consensus 262 ~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d~~gqTEtg~~~~~~~~---~ 337 (528)
T COG0365 262 KYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILDIYGQTETGMGFIAGRP---P 337 (528)
T ss_pred HhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh-CCCEeccccccccCccccCCCC---C
Confidence 99999999999999999998766677899999999999999999999999999 5999999999999966555544 3
Q ss_pred cCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecC--Ccchhh------------hhccccCceEEEecCCce---
Q 014435 331 RRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP--NVTPVF------------ELTVNCNLFSYFRSNDHN--- 393 (424)
Q Consensus 331 ~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gy------------~~~~~TgD~g~~~~~g~~--- 393 (424)
...++.|+|+||+++.|+|. +|++++.|+ |+|+++.+ .++.+| ..||.|||.+++|+||++
T Consensus 338 ~~~g~~g~p~pG~~~~vvdd-~g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy~~i~ 415 (528)
T COG0365 338 VKNGSSGLPLPGYAVRRVDD-EGNPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDEDGYFWLH 415 (528)
T ss_pred cCCCCCCCCCCCceeEEECC-CCCcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEccCCCEEEE
Confidence 34555699999999999995 599999999 99999987 667777 228999999999999988
Q ss_pred ----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| |++.|++|.+.|||++|.+||.|.||+|||
T Consensus 416 GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg 451 (528)
T COG0365 416 GRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVG 451 (528)
T ss_pred eeccceEeccCeeccHHHHHHHHHhCcceeeeEEEe
Confidence 4 999999999999999999999999999997
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.7e-62 Score=474.79 Aligned_cols=389 Identities=35% Similarity=0.509 Sum_probs=326.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+||+||.++++++|+.|++.|+++||+|+|+++|++++++++|||+++|++++|+||.+...++.++++.+++++++++.
T Consensus 39 ~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~ 118 (534)
T COG0318 39 LTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSA 118 (534)
T ss_pred eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHhcCCCC----eEEEecCCCccccccccCCCcc-cchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcch
Q 014435 105 ELWDKVKDLNLP----AVLLGSKDKVSSSGLISRSSKI-VSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKG 179 (424)
Q Consensus 105 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 179 (424)
++.......... ..+..... ..... ..+++....... .........++|+++++|||||||.||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~i~yTSGTTG~PKg 188 (534)
T COG0318 119 EFAALLEAVAEALPVVLVVLLVGD---------ADDRLPITLEALAAEGPG-PDADARPVDPDDLAFLLYTSGTTGLPKG 188 (534)
T ss_pred cchhHHHHHhccCCcceEEEeccc---------ccccccccHHHHhhccCC-cccccCCCCCCCEEEEEeCCCCCCCCCE
Confidence 754444333211 11111110 00000 234444322211 1122222678999999999999999999
Q ss_pred hhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC--CCCHHHHHHHHHHccceEE
Q 014435 180 VILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG--KFDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 180 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~ 257 (424)
|++||+++..+..............++++++++|++|.+|+...++..+..|+++++.+ .+++..++..+.++++|++
T Consensus 189 v~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~ 268 (534)
T COG0318 189 VVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVL 268 (534)
T ss_pred eEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEE
Confidence 99999999988777766655212344889999999999999877777799999999998 5999999999999999999
Q ss_pred EechHHHHHHHhccccccCCCCC-eeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcc
Q 014435 258 WVVPPIILALAKNSLVRKFDISS-LKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSA 336 (424)
Q Consensus 258 ~~~p~~~~~l~~~~~~~~~~~~~-lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 336 (424)
.++|.++..++++......++++ +|.++.||+++++++++++++.|+...+++.||+||+++.++...........+++
T Consensus 269 ~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~ 348 (534)
T COG0318 269 SGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSV 348 (534)
T ss_pred ecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcc
Confidence 99999999999998877766666 99999999999999999999999656899999999998877776555201356777
Q ss_pred ccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------h-hccccCceEEEecCCce-------e-e
Q 014435 337 GTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------E-LTVNCNLFSYFRSNDHN-------D-F 395 (424)
Q Consensus 337 G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~-~~~~TgD~g~~~~~g~~-------d-i 395 (424)
|+|.|+++++|+|+++++++| |++|||+++||+++.|| + +||+|||+|++|++|++ | |
T Consensus 349 G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I 427 (534)
T COG0318 349 GRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLI 427 (534)
T ss_pred cccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEE
Confidence 999999999999976666777 99999999999999999 1 89999999999999988 4 9
Q ss_pred EeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 396 FCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 396 ~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+.+|++|+|.|||+++.+||.|.+|+|+|
T Consensus 428 ~~gG~ni~p~eiE~~l~~~~~V~~aavvg 456 (534)
T COG0318 428 ISGGENIYPEEIEAVLAEHPAVAEAAVVG 456 (534)
T ss_pred EeCCeEECHHHHHHHHHhCCCcceEEEEe
Confidence 99999999999999999999999999986
No 5
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-61 Score=478.14 Aligned_cols=396 Identities=18% Similarity=0.248 Sum_probs=312.4
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHH
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHL---GITKK-----------DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSE 87 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~---gi~~g-----------~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 87 (424)
++.+||+||.+++.++|++|.+. |+++| |+|+|+++|+++|+++.+||+++|++.+|+++.++.++
T Consensus 89 ~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~e 168 (746)
T PTZ00342 89 QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDV 168 (746)
T ss_pred ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHH
Confidence 46899999999999999999974 99998 99999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEcccchHHHhcCC-----CCeEEEecCCCccc-----------------cccc-------------
Q 014435 88 LSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSS-----------------SGLI------------- 132 (424)
Q Consensus 88 i~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-----------------~~~~------------- 132 (424)
+.++++++++++++++.+....+.... .+.++......... ....
T Consensus 169 l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (746)
T PTZ00342 169 IVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSN 248 (746)
T ss_pred HHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999877766554322 12222222110000 0000
Q ss_pred ----------------------------cCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhhhcH
Q 014435 133 ----------------------------SRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTH 184 (424)
Q Consensus 133 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~ 184 (424)
........++++..... ...+.....++|++.|+|||||||.||||++||
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH 326 (746)
T PTZ00342 249 ELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT--TNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSN 326 (746)
T ss_pred ccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc--cCCCCCCCCccceEEEEEcCCCCCCCCEEEEcc
Confidence 00001112222222111 111223456899999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEechHHH
Q 014435 185 KNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPII 264 (424)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~ 264 (424)
+++.+.+..............+++++++|++|.+++. ..+.++..|+++++.+. ++..+.+.|+++++|+++++|.++
T Consensus 327 ~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~-~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~ 404 (746)
T PTZ00342 327 KNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERV-IAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVF 404 (746)
T ss_pred HHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHH
Confidence 9999887654332111122348999999999999995 56778999999998765 899999999999999999999999
Q ss_pred HHHHhc--------cccc----------------------------------cCCCCCeeEEEecCCCCCHHHHHHHHHh
Q 014435 265 LALAKN--------SLVR----------------------------------KFDISSLKLVGSGAAPLGKELMEDCQKN 302 (424)
Q Consensus 265 ~~l~~~--------~~~~----------------------------------~~~~~~lr~~~~~g~~~~~~~~~~~~~~ 302 (424)
+.|.+. +... ....+++|.+++||+++++++.++|+..
T Consensus 405 ~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~ 484 (746)
T PTZ00342 405 NRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVL 484 (746)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHh
Confidence 988652 1000 0012689999999999999999999988
Q ss_pred CCCCeEEecccCccCCCceeecCCCCCccCCCcccccc-CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------
Q 014435 303 IPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------ 375 (424)
Q Consensus 303 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------ 375 (424)
+ ++.+++.||+||+++.++...+. ....+++|.|+ |+++++|+|.+++...+.++.|||+++||+++.||
T Consensus 485 ~-g~~i~~gYGlTEt~~~~~~~~~~--~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~ 561 (746)
T PTZ00342 485 L-NVNYYQGYGLTETTGPIFVQHAD--DNNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQ 561 (746)
T ss_pred c-CCCEEEeeccCcccceeeeccCC--CCCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhh
Confidence 8 69999999999998766665543 46778999998 99999999865555555567899999999999999
Q ss_pred -------hhccccCceEEEecCCce-------e-eE-eeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 376 -------ELTVNCNLFSYFRSNDHN-------D-FF-CKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 376 -------~~~~~TgD~g~~~~~g~~-------d-i~-~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||+|||+|++++||++ | |+ .+|++|+|.+||++|.+||.|.+|+|+|
T Consensus 562 T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG 626 (746)
T PTZ00342 562 TKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYG 626 (746)
T ss_pred hhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEc
Confidence 689999999999999988 3 77 4799999999999999999999999997
No 6
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.1e-61 Score=480.21 Aligned_cols=396 Identities=19% Similarity=0.265 Sum_probs=308.6
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
.+||+||.++++++|++|+++|+++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~ 158 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVE 158 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEEC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccchHHHhcCC------CCeEEEecCCCcccc-ccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 104 PELWDKVKDLN------LPAVLLGSKDKVSSS-GLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 104 ~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++....+.... .+.++.......... ..........++++++..... ...+.....++|+++|+|||||||.
T Consensus 159 ~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~I~yTSGTTG~ 237 (666)
T PLN02614 159 EKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEG-KQYDLPIKKKSDICTIMYTSGTTGD 237 (666)
T ss_pred HHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhccc-CCCCCCCCCCCceEEEEEcCCCCCC
Confidence 76554442211 112222211100000 000001123456665543321 1111223467999999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhh---hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHcc
Q 014435 177 SKGVILTHKNFIAASLMISAHQE---LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYR 253 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~ 253 (424)
||||++||+++...+........ .....++++++++|++|.++.. .....+..|+++++.+ .++..+++.+++++
T Consensus 238 PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~ 315 (666)
T PLN02614 238 PKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELK 315 (666)
T ss_pred CcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhC
Confidence 99999999999887655433221 1123458999999999999985 4566688999998875 58999999999999
Q ss_pred ceEEEechHHHHHHHhcccc---------------------------------cc-----------CCC-CCeeEEEecC
Q 014435 254 VTVWWVVPPIILALAKNSLV---------------------------------RK-----------FDI-SSLKLVGSGA 288 (424)
Q Consensus 254 ~t~~~~~p~~~~~l~~~~~~---------------------------------~~-----------~~~-~~lr~~~~~g 288 (424)
+|+++++|++++.+...... .. ..+ +++|.+++||
T Consensus 316 ~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gg 395 (666)
T PLN02614 316 PTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGA 395 (666)
T ss_pred CeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcC
Confidence 99999999999887642110 00 011 6899999999
Q ss_pred CCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCC--CccCCCCCceeEEE
Q 014435 289 APLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDT--LKPLPPNQLGEIWV 366 (424)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~--~~~~~~g~~Gel~v 366 (424)
+++++.+ ++|.+.++++++++.||+||+++..+...+.. ..+.+++|+|+|+++++|+|.++ +.+++.|+.|||++
T Consensus 396 a~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~v 473 (666)
T PLN02614 396 APLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPDE-LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICI 473 (666)
T ss_pred CCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeecccc-CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEE
Confidence 9999875 56667675689999999999876554433321 23568999999999999998333 47889999999999
Q ss_pred ecCCcchhh------------hhccccCceEEEecCCce-------e-eEe-eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 367 RGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D-FFC-KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 367 ~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d-i~~-~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|+.++.|| ++||+|||+|++|+||++ | |+. +|++|+|.+||++|.+||.|.+|+|+|
T Consensus 474 rGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g 552 (666)
T PLN02614 474 RGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYG 552 (666)
T ss_pred cCCcccccccCCHHHhhhhhccCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEe
Confidence 999999999 689999999999999988 3 775 799999999999999999999999987
No 7
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.6e-60 Score=472.92 Aligned_cols=396 Identities=19% Similarity=0.249 Sum_probs=306.9
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+.+||+||.++++++|++|.+.|+++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|+
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~ 155 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcC------CCCeEEEecCCCcccc-ccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 103 VPELWDKVKDL------NLPAVLLGSKDKVSSS-GLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 103 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
+++....+... ..+.++.......... ..........++++++..... ........++|+++|+|||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dd~a~i~yTSGTTG 233 (660)
T PLN02861 156 QESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSL--DCELPPKQKTDICTIMYTSGTTG 233 (660)
T ss_pred CHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcc--cCCCCccCCCceEEEEecCCCCC
Confidence 87665544321 1222222211100000 000001123456655543321 11222346899999999999999
Q ss_pred CcchhhhcHHHHHHHHHHHHhhhhh---ccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHc
Q 014435 176 VSKGVILTHKNFIAASLMISAHQEL---VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKY 252 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~ 252 (424)
.||||++||+++...+......... ....++++++++|++|.++... .+.++..|+++++.+ +++..+++.|+++
T Consensus 234 ~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~ 311 (660)
T PLN02861 234 EPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-GDIRYLMEDVQAL 311 (660)
T ss_pred CCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHh
Confidence 9999999999998876654433221 1134589999999999999864 455799999998874 5899999999999
Q ss_pred cceEEEechHHHHHHHhcc-------------------------------------ccccC-------CC-CCeeEEEec
Q 014435 253 RVTVWWVVPPIILALAKNS-------------------------------------LVRKF-------DI-SSLKLVGSG 287 (424)
Q Consensus 253 ~~t~~~~~p~~~~~l~~~~-------------------------------------~~~~~-------~~-~~lr~~~~~ 287 (424)
++|+++++|.+++.+.+.. ..... .+ +++|.+++|
T Consensus 312 ~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~G 391 (660)
T PLN02861 312 KPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSG 391 (660)
T ss_pred CCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEEC
Confidence 9999999999999886410 00000 11 589999999
Q ss_pred CCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeC-CCC-ccCCCCCceeEE
Q 014435 288 AAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSV-DTL-KPLPPNQLGEIW 365 (424)
Q Consensus 288 g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~-~~~~~g~~Gel~ 365 (424)
|+++++++. +|.+.++...+++.||+||+++.++...... ..+.+++|+|+++++++|+|. ++| ...+.++.|||+
T Consensus 392 gapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~ 469 (660)
T PLN02861 392 AAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSIANV-FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEIC 469 (660)
T ss_pred CCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeeccccc-CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEE
Confidence 999999975 4666664457999999999876655433321 235689999999999999983 334 344566789999
Q ss_pred EecCCcchhh------------hhccccCceEEEecCCce-------e-eEe-eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 366 VRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D-FFC-KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 366 v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d-i~~-~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++|+.++.|| ++||+|||+|++|+||++ | |+. +|++|+|.+||++|.+||.|.+|+|+|
T Consensus 470 vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G 549 (660)
T PLN02861 470 LRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYG 549 (660)
T ss_pred EcCCcccccccCCHHHHHhhhhccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEe
Confidence 9999999999 589999999999999988 3 775 799999999999999999999999986
No 8
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=5.8e-59 Score=458.27 Aligned_cols=394 Identities=36% Similarity=0.583 Sum_probs=325.9
Q ss_pred CCcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~-~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
++||+||.++++++|+.|++ .|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++++
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~ 145 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFT 145 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEE
Confidence 69999999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhhh
Q 014435 103 VPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVIL 182 (424)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 182 (424)
+.+....+.......+.+....... ........+++++.... ...+.....++++++++|||||||.||+|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~ 218 (560)
T PLN02574 146 SPENVEKLSPLGVPVIGVPENYDFD-----SKRIEFPKFYELIKEDF--DFVPKPVIKQDDVAAIMYSSGTTGASKGVVL 218 (560)
T ss_pred CHHHHHHHHhcCCcEEecCcccccc-----cCccCcccHHHHhhcCC--cccccCCCCcCCEEEEEcCCCccCCCcEEEE
Confidence 9887766655433332221110000 00112233444443322 1222334467899999999999999999999
Q ss_pred cHHHHHHHHHHHHhhh---hhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEe
Q 014435 183 THKNFIAASLMISAHQ---ELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWV 259 (424)
Q Consensus 183 t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 259 (424)
+|+++...+..+.... ......+++++..+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.+
T Consensus 219 sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~ 298 (560)
T PLN02574 219 THRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPV 298 (560)
T ss_pred eHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEec
Confidence 9999987765443211 1112234888999999999999777788889999999998899999999999999999999
Q ss_pred chHHHHHHHhcccc-ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcccc
Q 014435 260 VPPIILALAKNSLV-RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGT 338 (424)
Q Consensus 260 ~p~~~~~l~~~~~~-~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~ 338 (424)
+|+++..|.+.... ...+++++|.+++||+++++++++++.+.++++.+++.||+||++.+.+...........+++|+
T Consensus 299 ~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~ 378 (560)
T PLN02574 299 VPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGL 378 (560)
T ss_pred CCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceee
Confidence 99999999887543 34568899999999999999999999999988999999999998865543222222345678999
Q ss_pred ccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e-eEe
Q 014435 339 LVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D-FFC 397 (424)
Q Consensus 339 ~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d-i~~ 397 (424)
|.++++++|+|++++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+ | +++
T Consensus 379 ~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~ 458 (560)
T PLN02574 379 LAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKY 458 (560)
T ss_pred eCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEE
Confidence 9999999999988899999999999999999999999 579999999999999987 3 999
Q ss_pred eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 398 KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 398 ~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|++|+|.+||++|.+||+|.+++|+|
T Consensus 459 ~G~~v~~~eiE~~l~~~~~V~~~~v~~ 485 (560)
T PLN02574 459 KGFQIAPADLEAVLISHPEIIDAAVTA 485 (560)
T ss_pred CCEEECHHHHHHHHHhCCCcceEEEEc
Confidence 999999999999999999999999985
No 9
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=7.9e-60 Score=471.29 Aligned_cols=394 Identities=21% Similarity=0.255 Sum_probs=314.4
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+.+||+||.++++++|++|+++|+++||+|+++++|+++|+++++||+++|++++|+++.++.+++.++++.++++++|+
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~ 156 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFC 156 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEE
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcCC-----CCeEEEecCCCccccc-cccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 103 VPELWDKVKDLN-----LPAVLLGSKDKVSSSG-LISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 103 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
+++....+.... .+.++........... ..........+++++..... ...+.....++|+++|+|||||||.
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dd~a~IlyTSGTTG~ 235 (651)
T PLN02736 157 VPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRS-SPQPFRPPKPEDVATICYTSGTTGT 235 (651)
T ss_pred CHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhccc-CCCCCCCCCccceEEEEEcCCCCCC
Confidence 987665544321 1222222110000000 00011223456666543321 1112233468999999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
||+|++||+++...+......... ..++++++.+|++|.+++. .++.++..|+++++.+. ++..+++.++++++|+
T Consensus 236 PKGV~lsh~~l~~~~~~~~~~~~~--~~~d~~l~~lPl~h~~~~~-~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~ 311 (651)
T PLN02736 236 PKGVVLTHGNLIANVAGSSLSTKF--YPSDVHISYLPLAHIYERV-NQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTI 311 (651)
T ss_pred CcEEEEecHHHHHHHHHHHhccCC--CCCCEEEEeCCHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcE
Confidence 999999999999887766554444 3449999999999999996 67788999999988764 8899999999999999
Q ss_pred EEechHHHHHHHhcccc----------------------------c-c------------CCC-CCeeEEEecCCCCCHH
Q 014435 257 WWVVPPIILALAKNSLV----------------------------R-K------------FDI-SSLKLVGSGAAPLGKE 294 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~----------------------------~-~------------~~~-~~lr~~~~~g~~~~~~ 294 (424)
++++|.++..+.+.... . . ..+ +++|.+++||++++++
T Consensus 312 ~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~ 391 (651)
T PLN02736 312 FCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPD 391 (651)
T ss_pred EecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHH
Confidence 99999999887653110 0 0 011 4899999999999999
Q ss_pred HHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCc---cCCCCCceeEEEecCCc
Q 014435 295 LMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLK---PLPPNQLGEIWVRGPNV 371 (424)
Q Consensus 295 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~---~~~~g~~Gel~v~~~~~ 371 (424)
+.+++++.+ ++++++.||+||+++.++...+. ....+++|+|+|+++++|+|.+++. ...+++.|||+++|+.+
T Consensus 392 ~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v 468 (651)
T PLN02736 392 VMEFLRICF-GGRVLEGYGMTETSCVISGMDEG--DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPII 468 (651)
T ss_pred HHHHHHHHh-CCCeEEEechHHhchheeccCCC--CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCcc
Confidence 999999888 58999999999988766654433 4567899999999999999854432 22334579999999999
Q ss_pred chhh-------------hhccccCceEEEecCCce-------e-eEe-eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 372 TPVF-------------ELTVNCNLFSYFRSNDHN-------D-FFC-KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 372 ~~gy-------------~~~~~TgD~g~~~~~g~~-------d-i~~-~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+.|| ++||+|||+|++++||.+ | |++ +|++|+|.+||++|.+||.|.+|+|+|
T Consensus 469 ~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g 543 (651)
T PLN02736 469 FKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYG 543 (651)
T ss_pred ccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEe
Confidence 9999 589999999999999988 3 876 799999999999999999999999986
No 10
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.1e-59 Score=456.42 Aligned_cols=384 Identities=21% Similarity=0.243 Sum_probs=314.8
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+++||+||.++++++|+.|.+. +||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++++
T Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 120 (539)
T PRK06334 44 GKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLT 120 (539)
T ss_pred CcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEe
Confidence 5799999999999999999873 8999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcCCC-------CeEEEecCCCccccccccCCCcccchhhhhhcc----CCC----CCCCCCCCCCCCEEEE
Q 014435 103 VPELWDKVKDLNL-------PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELS----GSV----TDIPDVSVKQTDAAAL 167 (424)
Q Consensus 103 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~i 167 (424)
+++....+..... ..+..... . ....+.+..... ... .........+++++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i 188 (539)
T PRK06334 121 SKQLMQHLAQTHGEDAEYPFSLIYMEEV--R----------KELSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVI 188 (539)
T ss_pred hHHHHHHHhhhhhccccccccEEEEehh--h----------hhccHHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEE
Confidence 9877665543321 11111100 0 000000000000 000 0001123467899999
Q ss_pred ecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHH
Q 014435 168 LYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMAL 246 (424)
Q Consensus 168 ~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~ 246 (424)
+|||||||.||+|.++|+++............. ..++++++.+|++|.+|+...++.++..|+++++.. .+++..++
T Consensus 189 ~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~ 266 (539)
T PRK06334 189 LFTSGTEKLPKGVPLTHANLLANQRACLKFFSP--KEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIV 266 (539)
T ss_pred EECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCC--CCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHH
Confidence 999999999999999999998876655444333 345899999999999999766788899999998875 57999999
Q ss_pred HHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCC
Q 014435 247 RAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENP 326 (424)
Q Consensus 247 ~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 326 (424)
+.|+++++|++.++|+++..|++........+++||.+++||+++++++.+++.+.++++.+++.||+||++++++....
T Consensus 267 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~ 346 (539)
T PRK06334 267 EMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTV 346 (539)
T ss_pred HHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccC
Confidence 99999999999999999999988765555678999999999999999999999999988999999999999876665433
Q ss_pred CCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--------------hhccccCceEEEecCCc
Q 014435 327 LVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF--------------ELTVNCNLFSYFRSNDH 392 (424)
Q Consensus 327 ~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy--------------~~~~~TgD~g~~~~~g~ 392 (424)
.. ....+++|+|+++++++|+|++++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.
T Consensus 347 ~~-~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~ 425 (539)
T PRK06334 347 NS-PKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGE 425 (539)
T ss_pred CC-CCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCe
Confidence 21 3345689999999999999977789999999999999999999999 34999999999999998
Q ss_pred e-------e-eEeeeeeeChhhHHHHHhcCCCccc------ceecC
Q 014435 393 N-------D-FFCKLFQVAPAELEGLLVSHPEILD------AVVIP 424 (424)
Q Consensus 393 ~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~------a~v~g 424 (424)
+ | |+++|++|+|.|||++|.+||+|.+ ++|+|
T Consensus 426 l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~ 471 (539)
T PRK06334 426 LFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCG 471 (539)
T ss_pred EEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEc
Confidence 7 3 9999999999999999999999998 56654
No 11
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=5.1e-59 Score=465.13 Aligned_cols=398 Identities=22% Similarity=0.285 Sum_probs=316.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|+.|++.|+++||+|++++||++++++++|||+++|++++|+++.++.+++..++++++++++|
T Consensus 118 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li 197 (666)
T PLN02654 118 DASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVI 197 (666)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcC------------------CCCeEEEecCCCcc-ccccccCCCcccchhhhhhccCCCCCCCCCCCCCC
Q 014435 102 TVPELWDKVKDL------------------NLPAVLLGSKDKVS-SSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQT 162 (424)
Q Consensus 102 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (424)
+++......+.. ....++........ .............++++..... ...+.....++
T Consensus 198 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 275 (666)
T PLN02654 198 TCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYP--TKCEVEWVDAE 275 (666)
T ss_pred EcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcCC--CCCCceecCCC
Confidence 987643221110 00011111110000 0000000001122333332211 11222335679
Q ss_pred CEEEEecCCCCCCCcchhhhcHHHHHHHH-HHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC--
Q 014435 163 DAAALLYSSGTTGVSKGVILTHKNFIAAS-LMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-- 239 (424)
Q Consensus 163 ~~~~i~~TSGtTG~pK~v~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-- 239 (424)
|+++|+|||||||.||+|+++|++++... ......... ..++++++..|+.|..|+...++.+|..|+++++.+.
T Consensus 276 d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~ 353 (666)
T PLN02654 276 DPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDY--KPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAP 353 (666)
T ss_pred CceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCC--CCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCC
Confidence 99999999999999999999999876432 233333333 3449999999999999987778899999999998863
Q ss_pred --CCHHHHHHHHHHccceEEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCC--CeEEeccc
Q 014435 240 --FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPG--ATIFQGYG 313 (424)
Q Consensus 240 --~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~yG 313 (424)
+++..+++.|+++++|+++++|++++.|.+.... ...++++||.++++|+++++++++++.+.+++ +.+.+.||
T Consensus 354 ~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg 433 (666)
T PLN02654 354 NYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWW 433 (666)
T ss_pred CCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceecccc
Confidence 4799999999999999999999999999886532 34568899999999999999999999998853 68999999
Q ss_pred CccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEec--CCcchhh---------------h
Q 014435 314 MTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG--PNVTPVF---------------E 376 (424)
Q Consensus 314 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gy---------------~ 376 (424)
+||+++......+.....+++++|+|++|++++|+| ++|+.++.++.|||++++ |.++.+| +
T Consensus 434 ~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~ 512 (666)
T PLN02654 434 QTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFA 512 (666)
T ss_pred ccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCC
Confidence 999987666544332245678999999999999999 688999989999999999 6777777 5
Q ss_pred hccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 377 LTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 377 ~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+||+|||+|++|+||.+ | |+++|++|+|.|||++|.+||+|.||+|+|
T Consensus 513 g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaaVvg 568 (666)
T PLN02654 513 GYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVG 568 (666)
T ss_pred CEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 89999999999999988 3 999999999999999999999999999986
No 12
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2e-59 Score=444.70 Aligned_cols=384 Identities=27% Similarity=0.329 Sum_probs=305.8
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCe
Q 014435 19 LVLPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPK 98 (424)
Q Consensus 19 ~~~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~ 98 (424)
...++.+||+|+.+++.++|++|++.|+.+||+|+|++.|+++|+++.+||+.+|++.||+.++.+++++.++|++++++
T Consensus 40 ~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~ 119 (613)
T COG1022 40 LGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESK 119 (613)
T ss_pred CCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCce
Confidence 45778899999999999999999999997799999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccchH-HHhcCCCCe-EEEec-------CCCcccccccc---CCCcccchhhhhhccCCCCCCCCCCCCCCCEEE
Q 014435 99 LVITVPELWD-KVKDLNLPA-VLLGS-------KDKVSSSGLIS---RSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 166 (424)
Q Consensus 99 ~ii~~~~~~~-~~~~~~~~~-~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (424)
+++++.+... .+....... .+... ........... ...+...+ ...... ......+..+||.|.
T Consensus 120 ~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~dDlat 195 (613)
T COG1022 120 VIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLF--LIDSAG--LEGRIAPPKPDDLAT 195 (613)
T ss_pred EEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhh--hhcccc--cccccCCCCccceEE
Confidence 9999975433 333222110 00000 00000000000 00011111 011111 111224667999999
Q ss_pred EecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHH
Q 014435 167 LLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMAL 246 (424)
Q Consensus 167 i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 246 (424)
|+|||||||.||||++||+|+.+++..+..... .....|+.++++|+.|++.........+..|+++.. ..++..++
T Consensus 196 iiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~-~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~--~~~~~~~~ 272 (613)
T COG1022 196 IIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP-PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLF--KEDPRTLL 272 (613)
T ss_pred EEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC-CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEe--cCCHHHHH
Confidence 999999999999999999999999988877765 233459999999999999996444555555555554 44899999
Q ss_pred HHHHHccceEEEechHHHHHHHhc--------ccc----------------------------------------ccCCC
Q 014435 247 RAIEKYRVTVWWVVPPIILALAKN--------SLV----------------------------------------RKFDI 278 (424)
Q Consensus 247 ~~i~~~~~t~~~~~p~~~~~l~~~--------~~~----------------------------------------~~~~~ 278 (424)
+.+.+.+||+++++|.+|+.+.+. ... +...-
T Consensus 273 ~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lG 352 (613)
T COG1022 273 EDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALG 352 (613)
T ss_pred HHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhC
Confidence 999999999999999999876432 000 00011
Q ss_pred CCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCC
Q 014435 279 SSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPP 358 (424)
Q Consensus 279 ~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~ 358 (424)
.++|++++||+++++++...++.. |+++.++||+||+++..+.+++. ....+++|+|+|+++++|+|.
T Consensus 353 gri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~~~--~~~~gtvG~p~p~~evKI~d~-------- 420 (613)
T COG1022 353 GRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVNPPD--RFVLGTVGKPLPGIEVKIADD-------- 420 (613)
T ss_pred CcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEcccc--CcccCCcCCcCCCceEEEccC--------
Confidence 489999999999999999999987 79999999999999999998877 788899999999999999994
Q ss_pred CCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e--eEeeeeeeChhhHHHHHhcCCC
Q 014435 359 NQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D--FFCKLFQVAPAELEGLLVSHPE 416 (424)
Q Consensus 359 g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d--i~~~G~~v~~~~iE~~l~~~p~ 416 (424)
|||+|+||.+++|| |+||+|||+|.++++|++ | +..+|++|.|+.||+.+.++|-
T Consensus 421 ---GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~ 497 (613)
T COG1022 421 ---GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPL 497 (613)
T ss_pred ---ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCC
Confidence 99999999999999 999999999999999998 3 4469999999999999999999
Q ss_pred cccceecC
Q 014435 417 ILDAVVIP 424 (424)
Q Consensus 417 V~~a~v~g 424 (424)
|.+++|+|
T Consensus 498 I~qi~vvg 505 (613)
T COG1022 498 IEQICVVG 505 (613)
T ss_pred eeEEEEEe
Confidence 99999986
No 13
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-58 Score=455.74 Aligned_cols=389 Identities=23% Similarity=0.286 Sum_probs=323.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..++++++++++
T Consensus 71 ~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 150 (549)
T PRK07788 71 ERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKAL 150 (549)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEE
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCCC---eEEE-ecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 101 ITVPELWDKVKDLNLP---AVLL-GSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 101 i~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
|++++....+..+... ...+ ....... .....+..+++++..... . ......++.++++|||||||.
T Consensus 151 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~i~~TSGTTG~ 221 (549)
T PRK07788 151 VYDDEFTDLLSALPPDLGRLRAWGGNPDDDE-----PSGSTDETLDDLIAGSST-A---PLPKPPKPGGIVILTSGTTGT 221 (549)
T ss_pred EECchhHHHHHhhccccccceEEEEecCccc-----cCCcCcccHHHHhcCCCC-C---CCCCCCCCCcEEEECCCCCCC
Confidence 9998877766544211 1111 1110000 111344556666543221 1 112235678999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
||+|.++|+++............. ..+++++...|++|.+|+. .++.++..|+++++...+++..+++.++++++|+
T Consensus 222 PKgv~~s~~~~~~~~~~~~~~~~~--~~~d~~~~~~p~~~~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~ 298 (549)
T PRK07788 222 PKGAPRPEPSPLAPLAGLLSRVPF--RAGETTLLPAPMFHATGWA-HLTLAMALGSTVVLRRRFDPEATLEDIAKHKATA 298 (549)
T ss_pred CCEEeccCccHHHHHHHHHhhCCC--CcCCeEEEccchHHHHHHH-HHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcE
Confidence 999999999998876655544443 3348899999999999995 6677899999999998899999999999999999
Q ss_pred EEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCC
Q 014435 257 WWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSG 334 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 334 (424)
+.++|+++..+++.... ...+++++|.+++||+++++++.+++.+.+ +..+++.||+||++..+.... .......+
T Consensus 299 ~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~-~~~~~~~~ 376 (549)
T PRK07788 299 LVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYGSTEVAFATIATP-EDLAEAPG 376 (549)
T ss_pred EEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccCcchhchhhccCh-hhhhhcCC
Confidence 99999999999887654 455688999999999999999999999988 588999999999876544322 22234567
Q ss_pred ccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh---------hhccccCceEEEecCCce-------e-eEe
Q 014435 335 SAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF---------ELTVNCNLFSYFRSNDHN-------D-FFC 397 (424)
Q Consensus 335 ~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy---------~~~~~TgD~g~~~~~g~~-------d-i~~ 397 (424)
++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+ | +++
T Consensus 377 ~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~ 455 (549)
T PRK07788 377 TVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVS 455 (549)
T ss_pred CcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcCCCCEEEeccCcceEEE
Confidence 899999999999999 6899999999999999999999999 579999999999999877 3 899
Q ss_pred eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 398 KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 398 ~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|++|+|.+||++|.+||+|.+|+|+|
T Consensus 456 ~G~~v~p~eIE~~l~~~~~V~~~~v~~ 482 (549)
T PRK07788 456 GGENVFPAEVEDLLAGHPDVVEAAVIG 482 (549)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEC
Confidence 999999999999999999999999985
No 14
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.2e-58 Score=457.93 Aligned_cols=396 Identities=23% Similarity=0.255 Sum_probs=308.3
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+++||+||.++++++|+.|+++|+++||+|++++||++++++++|||+++|++++|+++.++.+++.+++++++++++|+
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~ 170 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIIT 170 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEE
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc---------hHHHhc---CC---CCeEEEecCCC-ccccc-----cccCCCcccchhhhhhccCC---CCCCCCCC
Q 014435 103 VPEL---------WDKVKD---LN---LPAVLLGSKDK-VSSSG-----LISRSSKIVSFHDLIELSGS---VTDIPDVS 158 (424)
Q Consensus 103 ~~~~---------~~~~~~---~~---~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 158 (424)
++.. ...+.. .. ...++...... ..... ..........+++++..... ........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (647)
T PTZ00237 171 TNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVP 250 (647)
T ss_pred cccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCcee
Confidence 7531 111111 11 11222211100 00000 00001122345554432110 01112234
Q ss_pred CCCCCEEEEecCCCCCCCcchhhhcHHH-HHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec
Q 014435 159 VKQTDAAALLYSSGTTGVSKGVILTHKN-FIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 237 (424)
Q Consensus 159 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 237 (424)
..++|+++|+|||||||.||+|+++|.+ +........... ....++++++..|+.|..+.. .++.++..|+++++.
T Consensus 251 ~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~--~~~~~d~~~~~~~~~w~~~~~-~~~~~l~~G~t~v~~ 327 (647)
T PTZ00237 251 VESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII--EKDIPTVVFSHSSIGWVSFHG-FLYGSLSLGNTFVMF 327 (647)
T ss_pred eCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc--CCCCCcEEEEcCCCceEeeHH-HHHHHHhCCcEEEEe
Confidence 5689999999999999999999999998 433222212222 223348999999999987653 678899999999987
Q ss_pred CC--CC----HHHHHHHHHHccceEEEechHHHHHHHhcccc-----ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCC
Q 014435 238 GK--FD----IEMALRAIEKYRVTVWWVVPPIILALAKNSLV-----RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 306 (424)
Q Consensus 238 ~~--~~----~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-----~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~ 306 (424)
+. +. +..+++.++++++|+++++|++++.|++.... ...++++||.++++|+++++++.+++++.+ ++
T Consensus 328 ~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~ 406 (647)
T PTZ00237 328 EGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KI 406 (647)
T ss_pred CCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHHHHhc-CC
Confidence 53 12 68899999999999999999999999875321 345689999999999999999999999988 59
Q ss_pred eEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecC---Ccchhh--------
Q 014435 307 TIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP---NVTPVF-------- 375 (424)
Q Consensus 307 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gy-------- 375 (424)
++++.||+||+++.+....+. .....+++|+|+++++++|+| ++|++++.|+.|||++++| .++.||
T Consensus 407 ~i~~~yG~TE~~~~~~~~~~~-~~~~~~s~G~p~~g~~~~i~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~ 484 (647)
T PTZ00237 407 KSSRGYGQTEIGITYLYCYGH-INIPYNATGVPSIFIKPSILS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFK 484 (647)
T ss_pred CEEeeechHHhChhhhccCCC-CCCCCCCCccCcCCceEEEEC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHH
Confidence 999999999988655443321 133457899999999999999 6899999999999999986 567777
Q ss_pred ------hhccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 376 ------ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 376 ------~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||+|||+|+++++|.+ | |+++|++|+|.|||++|.+||.|.||+|+|
T Consensus 485 ~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V~eaavvg 547 (647)
T PTZ00237 485 QLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSILKHPLVLECCSIG 547 (647)
T ss_pred HHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCceeeEEEe
Confidence 489999999999999987 3 999999999999999999999999999986
No 15
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.2e-57 Score=451.79 Aligned_cols=398 Identities=25% Similarity=0.353 Sum_probs=317.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..++|||+||.+++.++|+.|++.|+++||+|++++||++++++++|||+++| +++|+++.++++++.+++++++++++
T Consensus 55 ~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~l 133 (632)
T PRK07529 55 RPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVL 133 (632)
T ss_pred CCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEE
Confidence 45689999999999999999999999999999999999999999999999999 56999999999999999999999999
Q ss_pred EEcccch-----HHHh----cCC-CCeEEEecCCCccccc---c-----ccCCCcccchhhhhhccCCCCCCCCCCCCCC
Q 014435 101 ITVPELW-----DKVK----DLN-LPAVLLGSKDKVSSSG---L-----ISRSSKIVSFHDLIELSGSVTDIPDVSVKQT 162 (424)
Q Consensus 101 i~~~~~~-----~~~~----~~~-~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (424)
|++..+. ..+. ... ...++........... . ......+..+.+.+...............++
T Consensus 134 i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 213 (632)
T PRK07529 134 VTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPD 213 (632)
T ss_pred EEeCCCCCchHHHHHHHHHhcCCcceeEEEecCcccccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcC
Confidence 9986432 1221 111 1122221111000000 0 0011223445554443321111122334679
Q ss_pred CEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC--C
Q 014435 163 DAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK--F 240 (424)
Q Consensus 163 ~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~ 240 (424)
++++++|||||||.||+|.++|+++............. ..++++++.+|++|.++....++.++..|+++++.++ +
T Consensus 214 ~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~--~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~ 291 (632)
T PRK07529 214 DVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGL--GPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGY 291 (632)
T ss_pred ceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCC--CCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCcccc
Confidence 99999999999999999999999998876655444443 3458999999999999998788999999999999864 2
Q ss_pred -C---HHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCcc
Q 014435 241 -D---IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTE 316 (424)
Q Consensus 241 -~---~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE 316 (424)
+ ...+++.++++++|++.++|+++..|++.... ..+++++|.+++||+++++++.+++++.+ ++++++.||+||
T Consensus 292 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~slr~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE 369 (632)
T PRK07529 292 RGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDISSLRYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTE 369 (632)
T ss_pred CcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCccceEEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccc
Confidence 1 36788999999999999999999999876542 34688999999999999999999999988 699999999999
Q ss_pred CCCceeecCCCCCccCCCccccccCCcEEEEeeC-CCC---ccCCCCCceeEEEecCCcchhh------------hhccc
Q 014435 317 TCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSV-DTL---KPLPPNQLGEIWVRGPNVTPVF------------ELTVN 380 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~---~~~~~g~~Gel~v~~~~~~~gy------------~~~~~ 380 (424)
++.++...... .....+++|.|+|+++++|+.. +++ ++++.|+.|||+++|+.++.|| ++||+
T Consensus 370 ~~~~~~~~~~~-~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~ 448 (632)
T PRK07529 370 ATCVSSVNPPD-GERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLN 448 (632)
T ss_pred cCcccccCCcc-ccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCccccccccCCCceE
Confidence 88766554332 2346789999999999998632 455 7899999999999999999999 57999
Q ss_pred cCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 381 CNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 381 TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|||+|+++++|.+ | ++++|++|+|.+||++|.+||+|.+|+|+|
T Consensus 449 TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V~~a~vvg 500 (632)
T PRK07529 449 TGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPAVALAAAVG 500 (632)
T ss_pred cCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999977 3 999999999999999999999999999985
No 16
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.6e-57 Score=451.63 Aligned_cols=396 Identities=23% Similarity=0.292 Sum_probs=312.1
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++|
T Consensus 81 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 160 (628)
T TIGR02316 81 ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIV 160 (628)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecccch---------HHHh----cC--CCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEE
Q 014435 102 TVPELW---------DKVK----DL--NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 166 (424)
Q Consensus 102 ~~~~~~---------~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (424)
+++... ..+. .. ....+++......... ........++++...... ...+.....++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ 236 (628)
T TIGR02316 161 SADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMR---LIPGRDVDYAALRTQHED-AQVPVEWLESNEPSY 236 (628)
T ss_pred ECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcC---cccCccccHHHHhhcccc-CCCCceecCCCCcEE
Confidence 986432 1111 11 1122222221100000 000112344444432211 112223346799999
Q ss_pred EecCCCCCCCcchhhhcHHHHHHHH-HHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CC
Q 014435 167 LLYSSGTTGVSKGVILTHKNFIAAS-LMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FD 241 (424)
Q Consensus 167 i~~TSGtTG~pK~v~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~ 241 (424)
|+|||||||.||+|+++|+++.... ......... ..++++++..|++|..|+...++.+|..|+++++.+. .+
T Consensus 237 ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~ 314 (628)
T TIGR02316 237 ILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGI--RAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPD 314 (628)
T ss_pred EEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCC--CCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCC
Confidence 9999999999999999999975432 222222333 3448999999999999987678899999999998763 47
Q ss_pred HHHHHHHHHHccceEEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCC
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCA 319 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 319 (424)
+..+++.++++++|+++++|++++.|.+.... ...++++||.+++||+++++++.+++++.+ +..+++.||+||++.
T Consensus 315 ~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~ 393 (628)
T TIGR02316 315 PGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGW 393 (628)
T ss_pred HHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEEecccccccCc
Confidence 89999999999999999999999998876432 345689999999999999999999999888 589999999999885
Q ss_pred ceeecCCCC--CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCC---cchhh----------------hhc
Q 014435 320 PISLENPLV--GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPN---VTPVF----------------ELT 378 (424)
Q Consensus 320 ~~~~~~~~~--~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~---~~~gy----------------~~~ 378 (424)
.++...+.. .....+++|+|+++++++|+|++++++++.|+.|||+++||. ++.+| ++|
T Consensus 394 ~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 473 (628)
T TIGR02316 394 PVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPL 473 (628)
T ss_pred eeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCE
Confidence 444322211 124567899999999999999668999999999999999983 34444 348
Q ss_pred cccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 379 VNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 379 ~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|+|||+|++++||.+ | |+++|++|+|.|||++|.+||+|.||+|+|
T Consensus 474 ~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~Vvg 527 (628)
T TIGR02316 474 YSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVAVVG 527 (628)
T ss_pred EECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEe
Confidence 999999999999987 3 999999999999999999999999999986
No 17
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=9e-58 Score=457.52 Aligned_cols=396 Identities=21% Similarity=0.239 Sum_probs=305.4
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
..+||+||.++++++|++|.+.|+++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|+
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~ 184 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVIC 184 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEE
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcCC-----CCeEEEecCCCcccccc--ccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 103 VPELWDKVKDLN-----LPAVLLGSKDKVSSSGL--ISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 103 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
+.+....+.... ...++............ ......+.+++++...+.. ...+.....++|+++|+|||||||
T Consensus 185 ~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dd~a~I~yTSGTTG 263 (696)
T PLN02387 185 DSKQLKKLIDISSQLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKE-NPVDPDLPSPNDIAVIMYTSGSTG 263 (696)
T ss_pred CHHHHHHHHHHhhccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhcc-CCCCCCCCCccceEEEEecCCCCC
Confidence 987766554432 12222221111000000 0011223456666544332 111223346899999999999999
Q ss_pred CcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCC--------HHHHHH
Q 014435 176 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD--------IEMALR 247 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~ 247 (424)
.||||++||+++...+........ ....++++++++|++|.+++. .....+..|+++....... +..++.
T Consensus 264 ~PKGV~lth~~l~~~~~~~~~~~~-~~~~~d~~l~~lPl~Hi~~~~-~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~ 341 (696)
T PLN02387 264 LPKGVMMTHGNIVATVAGVMTVVP-KLGKNDVYLAYLPLAHILELA-AESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKG 341 (696)
T ss_pred CCCEEEEEcHHHHHHHHHHHhhcC-CCCCCCEEEEECcHHHHHHHH-HHHHHHHhCCEEEECChhhhcccccccccCchh
Confidence 999999999999887766543321 123459999999999999986 3444567777776654321 234567
Q ss_pred HHHHccceEEEechHHHHHHHhccccc-----------------------------------------------cCCCCC
Q 014435 248 AIEKYRVTVWWVVPPIILALAKNSLVR-----------------------------------------------KFDISS 280 (424)
Q Consensus 248 ~i~~~~~t~~~~~p~~~~~l~~~~~~~-----------------------------------------------~~~~~~ 280 (424)
.++++++|++.++|.+++.+.+..... ....++
T Consensus 342 ~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 421 (696)
T PLN02387 342 DASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGR 421 (696)
T ss_pred hHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCc
Confidence 899999999999999999886532100 000158
Q ss_pred eeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCc-cC--C
Q 014435 281 LKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLK-PL--P 357 (424)
Q Consensus 281 lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~-~~--~ 357 (424)
+|.+++||+++++++.+.++..+ ++.+++.||+||+++.++...+. +...+++|.|+|+++++|+|.+++. .+ .
T Consensus 422 lr~i~~GGapl~~~~~~~~~~~~-g~~v~~~YG~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~ 498 (696)
T PLN02387 422 IRFMLSGGAPLSGDTQRFINICL-GAPIGQGYGLTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDK 498 (696)
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc-CCCeeEeechhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCC
Confidence 99999999999999988887777 69999999999998776655443 4567899999999999999954433 22 3
Q ss_pred CCCceeEEEecCCcchhh---------------hh--ccccCceEEEecCCce-------e-eEe-eeeeeChhhHHHHH
Q 014435 358 PNQLGEIWVRGPNVTPVF---------------EL--TVNCNLFSYFRSNDHN-------D-FFC-KLFQVAPAELEGLL 411 (424)
Q Consensus 358 ~g~~Gel~v~~~~~~~gy---------------~~--~~~TgD~g~~~~~g~~-------d-i~~-~G~~v~~~~iE~~l 411 (424)
++..|||+++|+.++.|| ++ ||+|||+|++++||++ | |+. +|++|+|.+||++|
T Consensus 499 ~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l 578 (696)
T PLN02387 499 PMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAAL 578 (696)
T ss_pred CCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHH
Confidence 445799999999999999 13 9999999999999988 3 776 69999999999999
Q ss_pred hcCCCcccceecC
Q 014435 412 VSHPEILDAVVIP 424 (424)
Q Consensus 412 ~~~p~V~~a~v~g 424 (424)
.+||.|.+|+|+|
T Consensus 579 ~~~p~V~~~~V~g 591 (696)
T PLN02387 579 SVSPYVDNIMVHA 591 (696)
T ss_pred hcCCCeeEEEEEe
Confidence 9999999999986
No 18
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=4.3e-57 Score=450.69 Aligned_cols=394 Identities=25% Similarity=0.308 Sum_probs=316.1
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+.+||+||.+++.++|+.|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++|+
T Consensus 87 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~ 166 (625)
T TIGR02188 87 RKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVIT 166 (625)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchH---------HH----hcCC--CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEE
Q 014435 103 VPELWD---------KV----KDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAAL 167 (424)
Q Consensus 103 ~~~~~~---------~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 167 (424)
++.... .+ .... ...+++........ . ........+++++.... .........++++++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i 241 (625)
T TIGR02188 167 ADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPV-P--WVEGRDVWWHDLMAKAS--AYCEPEPMDSEDPLFI 241 (625)
T ss_pred cCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCc-C--ccccccccHHHHHhhcC--CCCCceecCCCCceEE
Confidence 875321 11 1111 11122221110000 0 00111223444443322 2223334567899999
Q ss_pred ecCCCCCCCcchhhhcHHHHHHHHHHHH-hhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CCH
Q 014435 168 LYSSGTTGVSKGVILTHKNFIAASLMIS-AHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDI 242 (424)
Q Consensus 168 ~~TSGtTG~pK~v~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~ 242 (424)
+|||||||.||+|+++|+++........ ..... ..++++++..|++|..+....++.+|..|+++++.+. .++
T Consensus 242 l~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~ 319 (625)
T TIGR02188 242 LYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDI--KDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDP 319 (625)
T ss_pred EecCCCCCCCCeEEECccHhHHHHHHHHHhccCC--CCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCCh
Confidence 9999999999999999999765433222 22222 3448999999999999886678899999999998753 479
Q ss_pred HHHHHHHHHccceEEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCC--CCeEEecccCccCC
Q 014435 243 EMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIP--GATIFQGYGMTETC 318 (424)
Q Consensus 243 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~yG~tE~~ 318 (424)
..+++.++++++|++.++|++++.|.+.... ...++++||.++++|+++++++.+++.+.++ ++++++.||+||++
T Consensus 320 ~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~ 399 (625)
T TIGR02188 320 GRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETG 399 (625)
T ss_pred hHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccC
Confidence 9999999999999999999999999876532 3346889999999999999999999999885 37899999999998
Q ss_pred CceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCC-CCCceeEEEec--CCcchhh---------------hhccc
Q 014435 319 APISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLP-PNQLGEIWVRG--PNVTPVF---------------ELTVN 380 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~-~g~~Gel~v~~--~~~~~gy---------------~~~~~ 380 (424)
+.+....+.....+++++|+|++|++++|+| ++|++++ .|+.|||++++ |.++.|| ++||+
T Consensus 400 ~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~ 478 (625)
T TIGR02188 400 GIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYF 478 (625)
T ss_pred CceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEE
Confidence 7765543332245678899999999999999 7899999 99999999999 5677777 56899
Q ss_pred cCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 381 CNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 381 TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|||+|+++++|.+ | ++++|++|+|.+||++|.+||.|.||+|+|
T Consensus 479 TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg 530 (625)
T TIGR02188 479 TGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVVG 530 (625)
T ss_pred CCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 9999999999987 3 999999999999999999999999999985
No 19
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=7.8e-57 Score=441.59 Aligned_cols=391 Identities=39% Similarity=0.615 Sum_probs=324.5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++|+
T Consensus 49 ~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 128 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIIT 128 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcCCC--CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchh
Q 014435 103 VPELWDKVKDLNL--PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGV 180 (424)
Q Consensus 103 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 180 (424)
+++....+..... ...++..+.. ......+.++..... ...+.....++++++++|||||||.||+|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~PKgv 197 (537)
T PLN02246 129 QSCYVDKLKGLAEDDGVTVVTIDDP---------PEGCLHFSELTQADE--NELPEVEISPDDVVALPYSSGTTGLPKGV 197 (537)
T ss_pred ccchHHHHHHHhhcCCceEEEeCCC---------CCCceeHHHHhcCCC--CCCCCCCCCccCEEEEEeCCCCCCCCceE
Confidence 9877665544321 1111111110 011223333333222 12233345678999999999999999999
Q ss_pred hhcHHHHHHHHHHHHhhh--hhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQ--ELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~ 258 (424)
+++|+++........... ......+++++..+|++|.+++...++.++..|+++++.+.+++..+++.++++++|++.
T Consensus 198 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (537)
T PLN02246 198 MLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAP 277 (537)
T ss_pred EEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEE
Confidence 999999987655432210 112234589999999999999876788899999999999999999999999999999999
Q ss_pred echHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCC---CCCccCCCc
Q 014435 259 VVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENP---LVGVRRSGS 335 (424)
Q Consensus 259 ~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~---~~~~~~~~~ 335 (424)
++|.++..|.+.......+++++|.+++||+++++++.+.+++.+++..+++.||+||++.+++.... .......++
T Consensus 278 ~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~ 357 (537)
T PLN02246 278 FVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGS 357 (537)
T ss_pred cchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCc
Confidence 99999999988765555567899999999999999999999999988999999999998865543211 111345678
Q ss_pred cccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e-
Q 014435 336 AGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D- 394 (424)
Q Consensus 336 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d- 394 (424)
+|+|+++++++|+|++++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+ |
T Consensus 358 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~ 437 (537)
T PLN02246 358 CGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKEL 437 (537)
T ss_pred cccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccce
Confidence 9999999999999977899999999999999999999999 579999999999999877 3
Q ss_pred eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 395 FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 395 i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++.+|++|+|.+||+.|.+||+|.+|+|++
T Consensus 438 i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~ 467 (537)
T PLN02246 438 IKYKGFQVAPAELEALLISHPSIADAAVVP 467 (537)
T ss_pred EEECCEEECcHHHHHHHHhCCCeeEEEEEc
Confidence 889999999999999999999999999985
No 20
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1e-57 Score=426.76 Aligned_cols=399 Identities=23% Similarity=0.290 Sum_probs=326.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.+..+||.|..+++.+++..|++.|+++++.|+|+.-|++||+++..||...|.+.|||..+++++.+.++++.+...++
T Consensus 105 ~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv 184 (691)
T KOG1256|consen 105 PYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIV 184 (691)
T ss_pred CcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEE
Confidence 44558999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEc-ccchHHHhcCCC------CeEEEecCCCcc--ccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCC
Q 014435 101 ITV-PELWDKVKDLNL------PAVLLGSKDKVS--SSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 101 i~~-~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 171 (424)
+++ ++....+.+... -+.++....... ..........+.+|+++++.+......+..+..++|.+.|+|||
T Consensus 185 ~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTS 264 (691)
T KOG1256|consen 185 FVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTS 264 (691)
T ss_pred EEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcC
Confidence 999 445555444221 122222222211 22222334568999999998875332222577899999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhh----hhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQ----ELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALR 247 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 247 (424)
||||.||||++||+|+...+....... ......+|.+++++|+.|++..... ...++.|+++.+..+ |+..+.+
T Consensus 265 GTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~-~~~~~~G~~IgF~~g-D~~~l~~ 342 (691)
T KOG1256|consen 265 GTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAHIFERVVE-LYTFYIGAKIGFARG-DILKLTD 342 (691)
T ss_pred CCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHHHHHHHHH-HhHhhcccEEEEecC-ChHHHHH
Confidence 999999999999999998655322221 1122235999999999999999644 444588999999875 8899999
Q ss_pred HHHHccceEEEechHHHHHHHhc-----------------------c---cc----c-cCC--------------CCCee
Q 014435 248 AIEKYRVTVWWVVPPIILALAKN-----------------------S---LV----R-KFD--------------ISSLK 282 (424)
Q Consensus 248 ~i~~~~~t~~~~~p~~~~~l~~~-----------------------~---~~----~-~~~--------------~~~lr 282 (424)
.+++.+||.+.++|.+|+.+.+. . .. + ... -.++|
T Consensus 343 dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr 422 (691)
T KOG1256|consen 343 DLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVR 422 (691)
T ss_pred HHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCcee
Confidence 99999999999999999877442 0 00 0 000 14789
Q ss_pred EEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCce
Q 014435 283 LVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLG 362 (424)
Q Consensus 283 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~G 362 (424)
.+++|++|+++++...++..+ +++++++||+||+.+.++...+. +...+++|.|+|+++++++|+++...-+.|..|
T Consensus 423 ~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~~~~--d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~G 499 (691)
T KOG1256|consen 423 LIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLTLPG--DNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKG 499 (691)
T ss_pred EEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEeccCC--CCCCCCcCCcccCceEEEechHHhCcCcCCCcc
Confidence 999999999999999999998 69999999999998666666655 458999999999999999998887777888899
Q ss_pred eEEEecCCcchhh-------------hhccccCceEEEecCCce---e-----eE-eeeeeeChhhHHHHHhcCCCcccc
Q 014435 363 EIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN---D-----FF-CKLFQVAPAELEGLLVSHPEILDA 420 (424)
Q Consensus 363 el~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~---d-----i~-~~G~~v~~~~iE~~l~~~p~V~~a 420 (424)
|||++|++++.|| |+|++|||+|+|+++|.+ | ++ ..|++|.|+.||++..+.+.|.+.
T Consensus 500 EIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi 579 (691)
T KOG1256|consen 500 EICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQI 579 (691)
T ss_pred eEEEecchhceeccCChHHHhhhhccccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEE
Confidence 9999999999999 999999999999999998 3 44 499999999999999999999999
Q ss_pred eecC
Q 014435 421 VVIP 424 (424)
Q Consensus 421 ~v~g 424 (424)
+|.|
T Consensus 580 ~V~g 583 (691)
T KOG1256|consen 580 FVLG 583 (691)
T ss_pred EEEC
Confidence 9876
No 21
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.6e-57 Score=448.25 Aligned_cols=398 Identities=25% Similarity=0.292 Sum_probs=311.9
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. ..+.+||+||.++++++|++|.++|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..++
T Consensus 21 p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l 100 (563)
T PLN02860 21 GNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPLNYRWSFEEAKSAM 100 (563)
T ss_pred CCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeCCcccCHHHHHHHH
Confidence 3344443 345799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcC-----CC-CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEE
Q 014435 93 KDSNPKLVITVPELWDKVKDL-----NL-PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 166 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (424)
+.+++++++++++........ .. ...+...... ... ..........++....... .........++++++
T Consensus 101 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ 176 (563)
T PLN02860 101 LLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPS-SSV--FIFLNSFLTTEMLKQRALG-TTELDYAWAPDDAVL 176 (563)
T ss_pred HhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcc-ccc--ccchhhccccchhccCccc-cccccCCCCCCCeEE
Confidence 999999999987653322221 11 1111111100 000 0000011111111111000 011112335789999
Q ss_pred EecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHH
Q 014435 167 LLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMAL 246 (424)
Q Consensus 167 i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 246 (424)
++|||||||.||+|.++|+++............. ..+++++..+|++|.+|+. .++.++..|+++++.+.+++..++
T Consensus 177 i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~--~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~ 253 (563)
T PLN02860 177 ICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGY--GEDDVYLHTAPLCHIGGLS-SALAMLMVGACHVLLPKFDAKAAL 253 (563)
T ss_pred EEecCCCCCCCceEEeehHHHHHHHHHHHhhcCC--CCCCEEEEecCchhhccHH-HHHHHHHcCceEEecCCCCHHHHH
Confidence 9999999999999999999998765554433333 3348999999999999985 678889999999999899999999
Q ss_pred HHHHHccceEEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeec
Q 014435 247 RAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLE 324 (424)
Q Consensus 247 ~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~ 324 (424)
+.++++++|++.++|+++..|++.... ....++++|.+++||+++++++.+++++.|++.++++.||+||+++.++..
T Consensus 254 ~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~ 333 (563)
T PLN02860 254 QAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFM 333 (563)
T ss_pred HHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccc
Confidence 999999999999999999999876432 224578999999999999999999999999889999999999987655432
Q ss_pred CCCC---------------------CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--------
Q 014435 325 NPLV---------------------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------- 375 (424)
Q Consensus 325 ~~~~---------------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------- 375 (424)
.... ......++|+|+++++++|++++ .|+.|||+++|+.++.||
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v~g~~~~~GY~~~~~~t~ 407 (563)
T PLN02860 334 TLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILTRGPHVMLGYWGQNSETA 407 (563)
T ss_pred cccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeEEEEecCcccccccCCccccc
Confidence 2110 01122378999999999999843 688999999999999999
Q ss_pred -----hhccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 376 -----ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 376 -----~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||+|||+|+++++|.+ | ++.+|++|+|.+||+++.+||+|.+|+|+|
T Consensus 408 ~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~ 469 (563)
T PLN02860 408 SVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVG 469 (563)
T ss_pred hhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEE
Confidence 689999999999999987 3 999999999999999999999999999985
No 22
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-57 Score=457.17 Aligned_cols=381 Identities=22% Similarity=0.286 Sum_probs=315.1
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVK 93 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~ 93 (424)
++++++..++.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++
T Consensus 20 pd~~a~~~~~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~ 99 (705)
T PRK06060 20 YDRPAFYAADVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPELHRDDHALAAR 99 (705)
T ss_pred CCceEEEecCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHh
Confidence 45555544567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCC
Q 014435 94 DSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGT 173 (424)
Q Consensus 94 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 173 (424)
.++++++|++.+....+.... .. ...+++...............++++++++|||||
T Consensus 100 ~~~~~~vi~~~~~~~~~~~~~----~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGS 156 (705)
T PRK06060 100 NTEPALVVTSDALRDRFQPSR----VA-------------------EAAELMSEAARVAPGGYEPMGGDALAYATYTSGT 156 (705)
T ss_pred cCCCcEEEEchHHhhhhcccc----cc-------------------hhhhhhhhccccCCCCCCCCCCCCeEEEEECCCC
Confidence 999999999876544332110 00 0011111000001111123456899999999999
Q ss_pred CCCcchhhhcHHHHHHHHHHHHh-hhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHH
Q 014435 174 TGVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEK 251 (424)
Q Consensus 174 TG~pK~v~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~ 251 (424)
||.||+|.++|+++......... .... ...++++...|++|.+++...++.++..|+++++.+ .+++..+...+++
T Consensus 157 TG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~ 234 (705)
T PRK06060 157 TGPPKAAIHRHADPLTFVDAMCRKALRL--TPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSAR 234 (705)
T ss_pred CCCCcEEEEccccHHHHHHHHHHHhhCC--CCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHh
Confidence 99999999999998876554422 2233 334889999999999988667788899999999886 4788899999999
Q ss_pred ccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCcc
Q 014435 252 YRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVR 331 (424)
Q Consensus 252 ~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~ 331 (424)
+++|+++++|+++..+++... ...++++|.+++||+++++++.+++.+.+++.++++.||+||++..+...... ..
T Consensus 235 ~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~--~~ 310 (705)
T PRK06060 235 FGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVD--EW 310 (705)
T ss_pred cCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCC--CC
Confidence 999999999999999887543 23578999999999999999999999999779999999999987655433222 34
Q ss_pred CCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh----------hhccccCceEEEecCCce-------e
Q 014435 332 RSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF----------ELTVNCNLFSYFRSNDHN-------D 394 (424)
Q Consensus 332 ~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy----------~~~~~TgD~g~~~~~g~~-------d 394 (424)
..+++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|++ |
T Consensus 311 ~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~dG~l~~~GR~dd 389 (705)
T PRK06060 311 RLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDSDGWVTYRCRADD 389 (705)
T ss_pred CcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECCCceEEEecccCc
Confidence 567899999999999999 6789999999999999999999999 579999999999999987 3
Q ss_pred -eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 395 -FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 395 -i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++++|++|+|.|||+.|.+||.|.+|+|+|
T Consensus 390 ~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~ 420 (705)
T PRK06060 390 TEVIGGVNVDPREVERLIIEDEAVAEAAVVA 420 (705)
T ss_pred eEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 899999999999999999999999999975
No 23
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-56 Score=446.62 Aligned_cols=394 Identities=24% Similarity=0.324 Sum_probs=315.3
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+.+||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++|+
T Consensus 97 ~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~ 176 (637)
T PRK00174 97 RKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVIT 176 (637)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchH---------HHh----cCC-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEe
Q 014435 103 VPELWD---------KVK----DLN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALL 168 (424)
Q Consensus 103 ~~~~~~---------~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 168 (424)
++.... .+. ... ...+++....... . .........++++..... ...+.....++++++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~ 251 (637)
T PRK00174 177 ADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGD-V--DWVEGRDLWWHELVAGAS--DECEPEPMDAEDPLFIL 251 (637)
T ss_pred cCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCC-c--CcCCCCcccHHHHHhhcC--CCCCccccCCCCcEEEE
Confidence 875431 111 111 1222222111000 0 000111223444443222 22223345678999999
Q ss_pred cCCCCCCCcchhhhcHHHHHHHHHHHH-hhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CCHH
Q 014435 169 YSSGTTGVSKGVILTHKNFIAASLMIS-AHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIE 243 (424)
Q Consensus 169 ~TSGtTG~pK~v~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~ 243 (424)
|||||||.||+|+++|+++........ ..... ...+++++..|++|..++...++.+|..|+++++.+. .++.
T Consensus 252 ~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~ 329 (637)
T PRK00174 252 YTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDY--KDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPG 329 (637)
T ss_pred ECCCCCCCCceEEeCcchhHHHHHHHHHhccCC--CCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChH
Confidence 999999999999999999765433222 22222 3348999999999999987678899999999998753 4799
Q ss_pred HHHHHHHHccceEEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCC--CeEEecccCccCCC
Q 014435 244 MALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPG--ATIFQGYGMTETCA 319 (424)
Q Consensus 244 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~yG~tE~~~ 319 (424)
.+++.|+++++|++.++|++++.|++.... ...++++||.++++|+++++++.+++.+.+++ +++++.||+||+++
T Consensus 330 ~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~ 409 (637)
T PRK00174 330 RFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGG 409 (637)
T ss_pred HHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCC
Confidence 999999999999999999999999876542 23467899999999999999999999988753 78999999999987
Q ss_pred ceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEec--CCcchhh---------------hhccccC
Q 014435 320 PISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG--PNVTPVF---------------ELTVNCN 382 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gy---------------~~~~~Tg 382 (424)
.+....+.....+.+++|+|++|++++|+| +++++++.|+.|||+++| ++++.|| ++||+||
T Consensus 410 ~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TG 488 (637)
T PRK00174 410 IMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTG 488 (637)
T ss_pred ceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECC
Confidence 665443322234567899999999999999 789999999999999999 5787887 4689999
Q ss_pred ceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 383 LFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 383 D~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|+|+++++|++ | ++++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 489 Dl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg 538 (637)
T PRK00174 489 DGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVG 538 (637)
T ss_pred ceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 99999999987 3 999999999999999999999999999985
No 24
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=3.1e-56 Score=438.10 Aligned_cols=387 Identities=25% Similarity=0.333 Sum_probs=320.2
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.+||+||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++++|++|.++.+++..+++.+++++++
T Consensus 53 ~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li 132 (547)
T PRK13295 53 PRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLV 132 (547)
T ss_pred cceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecccch-----HHHhcC----C-CCeEEEecCCCccccccccCCCcccchhhhhhcc-----C-CCCCCCCCCCCCCCEE
Q 014435 102 TVPELW-----DKVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELS-----G-SVTDIPDVSVKQTDAA 165 (424)
Q Consensus 102 ~~~~~~-----~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~ 165 (424)
+++++. ..+..+ . ...++..... ...++.+++... . ...........+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 200 (547)
T PRK13295 133 VPKTFRGFDHAAMARRLRPELPALRHVVVVGGD------------GADSFEALLITPAWEQEPDAPAILARLRPGPDDVT 200 (547)
T ss_pred EeccccCcchHHHHHHHhhhCCCcceEEEecCC------------CccCHHHHhhCCccccccccccccccCCCCCccee
Confidence 987641 111111 1 1111111110 111233322111 0 0011112334678999
Q ss_pred EEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHH
Q 014435 166 ALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMA 245 (424)
Q Consensus 166 ~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 245 (424)
+++|||||||.||+|.++|+++...+......... ..++++++.+|++|.+++...++.++..|+++++.+.+++..+
T Consensus 201 ~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~--~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 278 (547)
T PRK13295 201 QLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGL--GADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARA 278 (547)
T ss_pred EEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCC--CCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHH
Confidence 99999999999999999999998877665544444 3349999999999999987778999999999999988999999
Q ss_pred HHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecC
Q 014435 246 LRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLEN 325 (424)
Q Consensus 246 ~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~ 325 (424)
++.++++++|++.++|.++..+..........++++|.+++||+++++++.+++.+.+ ++++++.||+||++.+.+...
T Consensus 279 ~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~ 357 (547)
T PRK13295 279 AELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL-GAKIVSAWGMTENGAVTLTKL 357 (547)
T ss_pred HHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-CCCeEEeccCCCCCCeeeccC
Confidence 9999999999999999999999887666666788999999999999999999999988 799999999999887654433
Q ss_pred CCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-----------hhccccCceEEEecCCce-
Q 014435 326 PLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-----------ELTVNCNLFSYFRSNDHN- 393 (424)
Q Consensus 326 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-----------~~~~~TgD~g~~~~~g~~- 393 (424)
.........++|+|.++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 358 ~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~~g~l~ 436 (547)
T PRK13295 358 DDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDADGYIR 436 (547)
T ss_pred CCcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcCCceEE
Confidence 221123456889999999999999 6789999999999999999999999 468999999999999877
Q ss_pred ------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||++|.++|.|.+++|+|
T Consensus 437 ~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~ 474 (547)
T PRK13295 437 ISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVA 474 (547)
T ss_pred EEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 3 889999999999999999999999999975
No 25
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-56 Score=440.70 Aligned_cols=389 Identities=28% Similarity=0.399 Sum_probs=321.1
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++++||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.+++++++
T Consensus 71 ~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 150 (570)
T PRK04319 71 KEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLI 150 (570)
T ss_pred ceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhc--CC-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcc
Q 014435 102 TVPELWDKVKD--LN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSK 178 (424)
Q Consensus 102 ~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 178 (424)
+++........ .. ...++...... ........+.+.+.... ...+.....++++++++|||||||.||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PK 221 (570)
T PRK04319 151 TTPALLERKPADDLPSLKHVLLVGEDV-------EEGPGTLDFNALMEQAS--DEFDIEWTDREDGAILHYTSGSTGKPK 221 (570)
T ss_pred EChhhhhccchhcCCCceEEEEECCCc-------CCCcCccCHHHHHhhcC--CcCCccccCCCCCEEEEeCCCCCCCCC
Confidence 98876543321 11 11222221110 01122334555544322 222233446789999999999999999
Q ss_pred hhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEE
Q 014435 179 GVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 179 ~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 257 (424)
+|+++|+++.............. ..+++++..|++|.+|+...++.++..|+++++.. .+++..+++.++++++|++
T Consensus 222 gV~~s~~~l~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 222 GVLHVHNAMLQHYQTGKYVLDLH--EDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEEEecHHHHHHHHHHHHhcCCC--CCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 99999999987765554444443 34889999999999988777889999999998875 5899999999999999999
Q ss_pred EechHHHHHHHhccc--cccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCc
Q 014435 258 WVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGS 335 (424)
Q Consensus 258 ~~~p~~~~~l~~~~~--~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 335 (424)
+++|++++.|.+... ....+++++|.+++||+++++++.+++.+.+ +.++++.||+||+++.+....+. ....+++
T Consensus 300 ~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i~~~YG~tE~~~~~~~~~~~-~~~~~~~ 377 (570)
T PRK04319 300 YTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPIHDNWWMTETGGIMIANYPA-MDIKPGS 377 (570)
T ss_pred EeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCeEeceeecccCCEEEecCCC-CCCCCCc
Confidence 999999999987543 2344678999999999999999999999988 68999999999998766544332 1345688
Q ss_pred cccccCCcEEEEeeCCCCccCCCCCceeEEEec--CCcchhh------------hhccccCceEEEecCCce-------e
Q 014435 336 AGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG--PNVTPVF------------ELTVNCNLFSYFRSNDHN-------D 394 (424)
Q Consensus 336 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d 394 (424)
+|+|+++++++|+| +++.+++.|+.|||+++| +.++.|| ++||+|||+++++++|.+ |
T Consensus 378 ~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~l~~~GR~~d 456 (570)
T PRK04319 378 MGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGYFWFQGRVDD 456 (570)
T ss_pred CcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECCCeeEEEEecCCC
Confidence 99999999999999 688888999999999997 7889999 469999999999999877 3
Q ss_pred -eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 395 -FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 395 -i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++.+|++|+|.+||+.|.+||.|.+++|+|
T Consensus 457 ~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g 487 (570)
T PRK04319 457 VIKTSGERVGPFEVESKLMEHPAVAEAGVIG 487 (570)
T ss_pred EEEECCEEECHHHHHHHHhhCCCeeecceec
Confidence 889999999999999999999999999975
No 26
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=3.6e-56 Score=437.52 Aligned_cols=393 Identities=33% Similarity=0.523 Sum_probs=323.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+.+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.+++++++
T Consensus 53 ~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 53 GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCC-CCCCCCCCCCCCEEEEecCCCCCCCcchh
Q 014435 102 TVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV-TDIPDVSVKQTDAAALLYSSGTTGVSKGV 180 (424)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 180 (424)
+++.....+.......+.+... .......+.+++...... ...+.....++++++++|||||||.||+|
T Consensus 133 ~~~~~~~~~~~~~~~~i~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv 202 (546)
T PLN02330 133 TNDTNYGKVKGLGLPVIVLGEE----------KIEGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGV 202 (546)
T ss_pred EccchhhhHhhcCCcEEEecCC----------CCCCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEE
Confidence 9998887776655443333211 111223345554332211 11122334578999999999999999999
Q ss_pred hhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEec
Q 014435 181 ILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVV 260 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 260 (424)
.++|+++..................+..+..+|++|.+++...++.++..|+++++.+.+++..+++.++++++|++.++
T Consensus 203 ~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 282 (546)
T PLN02330 203 MLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIV 282 (546)
T ss_pred EEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecC
Confidence 99999988764432111111111236789999999999987778889999999999999999999999999999999999
Q ss_pred hHHHHHHHhccccccCCCC--CeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecC-CCC--CccCCCc
Q 014435 261 PPIILALAKNSLVRKFDIS--SLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLEN-PLV--GVRRSGS 335 (424)
Q Consensus 261 p~~~~~l~~~~~~~~~~~~--~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~-~~~--~~~~~~~ 335 (424)
|+++..+.+.......++. ++|.+++||+++++++++++.+.|+++++++.||+||++.+..... +.. .....++
T Consensus 283 P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~ 362 (546)
T PLN02330 283 PPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNS 362 (546)
T ss_pred CHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCc
Confidence 9999999886554444444 4789999999999999999999998899999999999875543321 111 1234468
Q ss_pred cccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e-
Q 014435 336 AGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D- 394 (424)
Q Consensus 336 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d- 394 (424)
+|.|+++++++|+|++++++++.|+.|||+++|+.++.|| ++||+|||+|++++||.+ |
T Consensus 363 vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~ 442 (546)
T PLN02330 363 VGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKEL 442 (546)
T ss_pred cccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHh
Confidence 9999999999999987899999999999999999999999 579999999999999987 3
Q ss_pred eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 395 FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 395 i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++.+|++|+|.+||++|.++|.|.+++|+|
T Consensus 443 i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 472 (546)
T PLN02330 443 IKYKGFQVAPAELEAILLTHPSVEDAAVVP 472 (546)
T ss_pred hhcCCEEECHHHHHHHHHhCCchheEEEEe
Confidence 889999999999999999999999999985
No 27
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.6e-56 Score=438.55 Aligned_cols=381 Identities=22% Similarity=0.316 Sum_probs=304.2
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|++|.++.+++..++++++++++|++
T Consensus 41 ~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~ 120 (552)
T PRK09274 41 ELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGI 120 (552)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cc--chHHHhcCC---CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcc
Q 014435 104 PE--LWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSK 178 (424)
Q Consensus 104 ~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 178 (424)
++ ....+.... ...++..... .......++++...... .........++++++++|||||||.||
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK 190 (552)
T PRK09274 121 PKAHLARRLFGWGKPSVRRLVTVGGR---------LLWGGTTLATLLRDGAA-APFPMADLAPDDMAAILFTSGSTGTPK 190 (552)
T ss_pred cHHHHHHHHhccCccchhheeccccc---------cccCCccHHHhcccCcc-ccCCCCCCCCCCeEEEEECCCCCCCCc
Confidence 52 222222111 1111111000 00011123333311111 112233446789999999999999999
Q ss_pred hhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-------CCCHHHHHHHHHH
Q 014435 179 GVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-------KFDIEMALRAIEK 251 (424)
Q Consensus 179 ~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-------~~~~~~~~~~i~~ 251 (424)
+|.++|+++...+.......... .+++.+...|++|.+++ ..|.++++.+ .+++..+++.+++
T Consensus 191 ~v~~s~~~l~~~~~~~~~~~~~~--~~~~~~~~~pl~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (552)
T PRK09274 191 GVVYTHGMFEAQIEALREDYGIE--PGEIDLPTFPLFALFGP--------ALGMTSVIPDMDPTRPATVDPAKLFAAIER 260 (552)
T ss_pred eEEecHHHHHHHHHHHHHHhCCC--CCceeeeccCHHHhhhh--------hhCCeEEecCcccccccccCHHHHHHHHHH
Confidence 99999999998877666555443 34889999999876543 3467777653 3688999999999
Q ss_pred ccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCC-CCeEEecccCccCCCceeecCCC---
Q 014435 252 YRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIP-GATIFQGYGMTETCAPISLENPL--- 327 (424)
Q Consensus 252 ~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~--- 327 (424)
+++|+++++|+++..|.+.......+++++|.+++||+++++++.+++++.++ ++++++.||+||+++++......
T Consensus 261 ~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~ 340 (552)
T PRK09274 261 YGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILF 340 (552)
T ss_pred cCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhc
Confidence 99999999999999998876655667899999999999999999999999986 47999999999988765543221
Q ss_pred ---C--CccCCCccccccCCcEEEEeeCC--------CCccCCCCCceeEEEecCCcchhh---------------hh--
Q 014435 328 ---V--GVRRSGSAGTLVAGVEAQIVSVD--------TLKPLPPNQLGEIWVRGPNVTPVF---------------EL-- 377 (424)
Q Consensus 328 ---~--~~~~~~~~G~~~~~~~~~i~d~~--------~~~~~~~g~~Gel~v~~~~~~~gy---------------~~-- 377 (424)
. ......++|+|+++++++|+|++ ++++++.|+.|||+++|++++.|| ++
T Consensus 341 ~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~ 420 (552)
T PRK09274 341 ATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDV 420 (552)
T ss_pred cccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCc
Confidence 0 01223478999999999999852 467899999999999999999999 23
Q ss_pred ccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 378 TVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 378 ~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
||+|||+|+++++|.+ | |+++|++|+|.+||++|.+||+|.+|+|+|
T Consensus 421 w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~ 475 (552)
T PRK09274 421 WHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRSALVG 475 (552)
T ss_pred EEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCcccceeEEEE
Confidence 9999999999999987 3 999999999999999999999999999985
No 28
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.1e-56 Score=435.42 Aligned_cols=403 Identities=29% Similarity=0.444 Sum_probs=330.3
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~-gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
+...++. ..+++||+||.+++.++|..|.+. |+++|++|+++++|+++++++++||+++|++++|+++..+.+++.++
T Consensus 24 ~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 103 (546)
T PRK08314 24 PDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPVNPMNREEELAHY 103 (546)
T ss_pred CCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEeecCcCcCHHHHHHH
Confidence 3344443 445799999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEcccchHHHhcCC----CCeEEEecC-CCcccc-cc-------------ccCCCcccchhhhhhccCCCC
Q 014435 92 VKDSNPKLVITVPELWDKVKDLN----LPAVLLGSK-DKVSSS-GL-------------ISRSSKIVSFHDLIELSGSVT 152 (424)
Q Consensus 92 l~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~ 152 (424)
++.+++++++++++....+.... ...+++... ...... .. ......+..+++......
T Consensus 104 l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 180 (546)
T PRK08314 104 VTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAPGGVVAWKEALAAGL--- 180 (546)
T ss_pred HHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccccccccccccHHHHhcccC---
Confidence 99999999999988766554431 122222110 000000 00 000112233444433211
Q ss_pred CCCCCCCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCc
Q 014435 153 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 232 (424)
Q Consensus 153 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 232 (424)
........++++++++|||||||.||+|.++|+++...+......... ..++++++.+|++|.+|+...++.++..|+
T Consensus 181 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 258 (546)
T PRK08314 181 APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNS--TPESVVLAVLPLFHVTGMVHSMNAPIYAGA 258 (546)
T ss_pred CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCC--CCCceEEEEcCchHHHHHHHHHHHHHHcCC
Confidence 112334567899999999999999999999999999887765555444 344899999999999999878889999999
Q ss_pred eEEecCCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecc
Q 014435 233 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 312 (424)
Q Consensus 233 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~y 312 (424)
++++.+.+++..+.+.++++++|++.++|.++..++........+++++|.+++||+++++++.+++.+.+ +.++++.|
T Consensus 259 ~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~Y 337 (546)
T PRK08314 259 TVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEAVAERLKELT-GLDYVEGY 337 (546)
T ss_pred eEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHHHHHHHHHHc-CCcEEecc
Confidence 99999989999999999999999999999999999877655566788999999999999999999999988 68999999
Q ss_pred cCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh----------------h
Q 014435 313 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF----------------E 376 (424)
Q Consensus 313 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy----------------~ 376 (424)
|+||++......... ....+++|.|.++++++|+|++++++++.|+.|||+++|+.++.|| +
T Consensus 338 G~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~ 415 (546)
T PRK08314 338 GLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGK 415 (546)
T ss_pred cccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCC
Confidence 999988766554333 2345789999999999999987899999999999999999999999 1
Q ss_pred hccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 377 LTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 377 ~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+||+|||+|+++++|.+ | ++++|++|+|.+||++|.++|+|.+++|+|
T Consensus 416 ~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~ 471 (546)
T PRK08314 416 RFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIA 471 (546)
T ss_pred ceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEe
Confidence 39999999999999877 3 899999999999999999999999999875
No 29
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.8e-56 Score=441.89 Aligned_cols=396 Identities=21% Similarity=0.202 Sum_probs=304.5
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
.+||+||.++++++|..|.+.|+++||+|+|+++|+++|+++++||+++|++++|+++.++++++.++++.+++++++++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~ 155 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQ 155 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEEC
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccchH-HHhcC-----CCCeEEEecCCCccccc-cccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 104 PELWD-KVKDL-----NLPAVLLGSKDKVSSSG-LISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 104 ~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++... .+... ....++........... .........++++++....... .......++|+++++|||||||.
T Consensus 156 ~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~iiyTSGTTG~ 234 (660)
T PLN02430 156 DKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENP-SETNPPKPLDICTIMYTSGTSGD 234 (660)
T ss_pred HHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccCC-CCCCCcCcCceEEEEECCCCCCC
Confidence 75332 22211 11222222111000000 0000112345666654433211 11223457999999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhh---hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHcc
Q 014435 177 SKGVILTHKNFIAASLMISAHQE---LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYR 253 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~ 253 (424)
||+|++||+++...+........ .....++++++++|++|.++... .+.++..|+++++... ++..+.+.+++++
T Consensus 235 PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~ 312 (660)
T PLN02430 235 PKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELK 312 (660)
T ss_pred CCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhC
Confidence 99999999999887665432211 11234589999999999999864 4567889999887654 7889999999999
Q ss_pred ceEEEechHHHHHHHhcccc-------------------------------ccC--------------CCCCeeEEEecC
Q 014435 254 VTVWWVVPPIILALAKNSLV-------------------------------RKF--------------DISSLKLVGSGA 288 (424)
Q Consensus 254 ~t~~~~~p~~~~~l~~~~~~-------------------------------~~~--------------~~~~lr~~~~~g 288 (424)
+|++.++|.+++.+.+.... ... ..+++|.+++||
T Consensus 313 pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gg 392 (660)
T PLN02430 313 PTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGG 392 (660)
T ss_pred CcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECC
Confidence 99999999999877642100 000 015899999999
Q ss_pred CCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeC-CCC-ccCCCCCceeEEE
Q 014435 289 APLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSV-DTL-KPLPPNQLGEIWV 366 (424)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~-~~~~~g~~Gel~v 366 (424)
+++++++.+.++ .++++.+++.||+||+++..+...+.. ....+++|.|.++++++++|. +.+ .+++.+..|||++
T Consensus 393 a~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~~~-~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~v 470 (660)
T PLN02430 393 APLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFPDE-MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICV 470 (660)
T ss_pred CCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeecccc-CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEe
Confidence 999999876555 444578999999999987766554332 345689999999999999873 333 4566677899999
Q ss_pred ecCCcchhh------------hhccccCceEEEecCCce-------e-eEe-eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 367 RGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D-FFC-KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 367 ~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d-i~~-~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|++++.|| ++||+|||+|++++||++ | |+. +|++|+|.+||++|.+||.|.+|+|+|
T Consensus 471 rg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G 549 (660)
T PLN02430 471 RGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYG 549 (660)
T ss_pred cCCCccccccCChHHhhhhhhccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEe
Confidence 999999999 689999999999999988 3 775 799999999999999999999999986
No 30
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-56 Score=434.36 Aligned_cols=382 Identities=20% Similarity=0.254 Sum_probs=315.6
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++|
T Consensus 66 ~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 145 (537)
T PRK13382 66 LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVI 145 (537)
T ss_pred CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCC-----CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++.+....+..... ..++.... ......++.+..... .. .....+++.++++|||||||.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~il~TSGTTG~ 210 (537)
T PRK13382 146 YDEEFSATVDRALADCPQATRIVAWTD-----------EDHDLTVEVLIAAHA--GQ--RPEPTGRKGRVILLTSGTTGT 210 (537)
T ss_pred EchhhHHHHHHHHhhccccceEEEecC-----------CcccccHHHHhhccC--cC--CCCCCCCCCeEEEECCCCCCC
Confidence 99876654433210 11111100 000112333322111 11 112346788999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
||+|.++|.++............. ..+++++...|++|.+|+ ..++.++..|+++++...+++..+++.|+++++|+
T Consensus 211 PKgv~~s~~~~~~~~~~~~~~~~~--~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~ 287 (537)
T PRK13382 211 PKGARRSGPGGIGTLKAILDRTPW--RAEEPTVIVAPMFHAWGF-SQLVLAASLACTIVTRRRFDPEATLDLIDRHRATG 287 (537)
T ss_pred CCEEEeccchHHHHHHHHHHhhCC--CCCCeEEEecChHhhhHH-HHHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEE
Confidence 999999998887765554444333 234889999999999998 47788899999999988899999999999999999
Q ss_pred EEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCC
Q 014435 257 WWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSG 334 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 334 (424)
+.++|+++..|++.... ...+++++|.+++||++++++++++|.+.+ +..+++.||+||++.++..... ......+
T Consensus 288 ~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~-~~~~~~~ 365 (537)
T PRK13382 288 LAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEAGMIATATPA-DLRAAPD 365 (537)
T ss_pred EEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEecccccccCcceecChh-HhccCCC
Confidence 99999999999876432 233567899999999999999999999998 4789999999998876554322 1234567
Q ss_pred ccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh---------hhccccCceEEEecCCce-------e-eEe
Q 014435 335 SAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF---------ELTVNCNLFSYFRSNDHN-------D-FFC 397 (424)
Q Consensus 335 ~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy---------~~~~~TgD~g~~~~~g~~-------d-i~~ 397 (424)
++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+++++++|.+ | ++.
T Consensus 366 ~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~ 444 (537)
T PRK13382 366 TAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDENGRLFVVGRDDEMIVS 444 (537)
T ss_pred CccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeCCCcEEEeccccceeEE
Confidence 999999999999999 5889999999999999999999999 789999999999999987 3 899
Q ss_pred eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 398 KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 398 ~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|++|+|.+||..|.+||+|.+++|+|
T Consensus 445 ~G~~v~~~eIE~~l~~~~~V~~~~v~~ 471 (537)
T PRK13382 445 GGENVYPIEVEKTLATHPDVAEAAVIG 471 (537)
T ss_pred CCEEECHHHHHHHHHhCCCEeeEEEEc
Confidence 999999999999999999999999975
No 31
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=4.8e-55 Score=429.00 Aligned_cols=387 Identities=23% Similarity=0.282 Sum_probs=317.5
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.+||+||.++++++|.+|++.|+++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++
T Consensus 51 ~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 130 (538)
T TIGR03208 51 VRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFV 130 (538)
T ss_pred cceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchH-----HHhcC----C-CCeEEEecCCCccccccccCCCcccchhhhhhccCC-C-CC----CCCCCCCCCCEE
Q 014435 102 TVPELWD-----KVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS-V-TD----IPDVSVKQTDAA 165 (424)
Q Consensus 102 ~~~~~~~-----~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~----~~~~~~~~~~~~ 165 (424)
+++.... ..... . ...++..... ....++..+..... . .. .......+++++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (538)
T TIGR03208 131 VPSVFRGFDHAAMARELQSKLPALRQVVVIDGD------------GDDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVT 198 (538)
T ss_pred EccccccccHHHHHHHHhccCCcceEEEEecCC------------CCcCHHHHhhccccccccccccccccCCCCCCCeE
Confidence 9876421 11111 1 1112221110 01122222211100 0 00 111234678999
Q ss_pred EEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHH
Q 014435 166 ALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMA 245 (424)
Q Consensus 166 ~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 245 (424)
+++|||||||.||+|+++|+++...+......... ..++++++.+|++|.+|+...++.++..|+++++.+.+++..+
T Consensus 199 ~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~ 276 (538)
T TIGR03208 199 QLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLEL--GGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARA 276 (538)
T ss_pred EEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCC--CCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHH
Confidence 99999999999999999999998877665554443 3348999999999999987778899999999999988999999
Q ss_pred HHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecC
Q 014435 246 LRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLEN 325 (424)
Q Consensus 246 ~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~ 325 (424)
++.++++++|++.++|.++..+..........++++|.+++||+++++++.+++.+.+ ++++++.||+||++++.....
T Consensus 277 ~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~ 355 (538)
T TIGR03208 277 AELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL-GALIVSAWGMTENGAVTVTEP 355 (538)
T ss_pred HHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-CCeEEeeeccCcCCCccccCc
Confidence 9999999999999999999998876544445678999999999999999999999988 699999999999887665443
Q ss_pred CCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-----------hhccccCceEEEecCCce-
Q 014435 326 PLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-----------ELTVNCNLFSYFRSNDHN- 393 (424)
Q Consensus 326 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-----------~~~~~TgD~g~~~~~g~~- 393 (424)
.........++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 356 ~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~ 434 (538)
T TIGR03208 356 DDALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDAEGYIR 434 (538)
T ss_pred ccchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECCCCcEE
Confidence 221122345789999999999999 6889999999999999999999999 469999999999999987
Q ss_pred ------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||++|.+||+|.+++|+|
T Consensus 435 ~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~ 472 (538)
T TIGR03208 435 INGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVA 472 (538)
T ss_pred EEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEe
Confidence 3 889999999999999999999999999975
No 32
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.6e-56 Score=429.76 Aligned_cols=382 Identities=19% Similarity=0.236 Sum_probs=314.6
Q ss_pred ecCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 13 RSLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 13 ~~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
.++..++. ..+++||.||.++++++|++|.+.|. +|++|+++++|++++++++|||+++|++++|+++.++.+++.++
T Consensus 14 ~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~ 92 (487)
T PRK07638 14 QPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVPLDIKWKQDELKER 92 (487)
T ss_pred CCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHH
Confidence 34445443 34579999999999999999999884 79999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCC
Q 014435 92 VKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 92 l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 171 (424)
++.+++++++++......+.......+... .+.+...... ..........+++++++|||
T Consensus 93 ~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TS 152 (487)
T PRK07638 93 LAISNADMIVTERYKLNDLPDEEGRVIEID------------------EWKRMIEKYL--PTYAPIENVQNAPFYMGFTS 152 (487)
T ss_pred HHhCCCCEEEEecccccchhhccceEEEeh------------------hhhhhhhhcc--ccccccccCCCCcEEEEeCC
Confidence 999999999999865544432221111110 1111111111 11111222356789999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEK 251 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~ 251 (424)
||||.||+|+++|+++...+......... ..+++++...|++|..++ ..++.++..|+++++.+.+++..+++.+++
T Consensus 153 GtTG~PKgv~~s~~~~~~~~~~~~~~~~~--~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~ 229 (487)
T PRK07638 153 GSTGKPKAFLRAQQSWLHSFDCNVHDFHM--KREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLMRKFIPNQVLDKLET 229 (487)
T ss_pred CCCCCCcEEEEecHHHHHHHHHHHHhcCc--CCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEcCCCCHHHHHHHHHH
Confidence 99999999999999998877665544443 344899999999998877 477889999999999999999999999999
Q ss_pred ccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCcc
Q 014435 252 YRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVR 331 (424)
Q Consensus 252 ~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~ 331 (424)
+++|++.++|+++..|.+... ...+.+.++++|+++++++.+++.+.++++++++.||+||++..+.... .....
T Consensus 230 ~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-~~~~~ 304 (487)
T PRK07638 230 ENISVMYTVPTMLESLYKENR----VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVD-EESER 304 (487)
T ss_pred cCCeEEEeCcHHHHHHHhCcC----cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecc-cccCC
Confidence 999999999999999987732 1345666788999999999999999998899999999999987655543 22345
Q ss_pred CCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce------
Q 014435 332 RSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN------ 393 (424)
Q Consensus 332 ~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~------ 393 (424)
..+++|+|+++++++|+| +++.+++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 305 ~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~~g~l~i~GR~ 383 (487)
T PRK07638 305 RPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDEEGFIYIVGRE 383 (487)
T ss_pred CCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcCCCeEEEEecC
Confidence 677999999999999999 6899999999999999999999999 569999999999999987
Q ss_pred -e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||+++.+||+|.+|+|+|
T Consensus 384 ~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 416 (487)
T PRK07638 384 KNMILFGGINIFPEEIESVLHEHPAVDEIVVIG 416 (487)
T ss_pred CCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 3 899999999999999999999999999985
No 33
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-55 Score=431.52 Aligned_cols=394 Identities=26% Similarity=0.361 Sum_probs=330.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+.+||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++
T Consensus 33 ~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 112 (523)
T PRK08316 33 GDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAF 112 (523)
T ss_pred CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEE
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCCC----eEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 101 ITVPELWDKVKDLNLP----AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 101 i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
+++++....+...... ........ ...........++++..... ..........+++++++|||||||.
T Consensus 113 i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~ 185 (523)
T PRK08316 113 LVDPALAPTAEAALALLPVDTLILSLVL-----GGREAPGGWLDFADWAEAGS--VAEPDVELADDDLAQILYTSGTESL 185 (523)
T ss_pred EEccchHHHHHHHhhhcCccceeeeecc-----cccccccchhhHHHHHhcCC--CccCccCCCCCCeEEEEeCCCCCCC
Confidence 9998877665433211 11110000 00011223344444443222 1223345567899999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
||+|.++|+++............. ..+++++..+|++|.+++...++.++..|+++++.+..++..+++.++++++|+
T Consensus 186 PK~v~~s~~~l~~~~~~~~~~~~~--~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 263 (523)
T PRK08316 186 PKGAMLTHRALIAEYVSCIVAGDM--SADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDAPDPELILRTIEAERITS 263 (523)
T ss_pred CcEEEEecHHHHHHHHHHHHHhCC--CCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeE
Confidence 999999999998876655554444 334899999999999998766777899999999998889999999999999999
Q ss_pred EEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcc
Q 014435 257 WWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSA 336 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 336 (424)
+.++|+++..+.+.......+++++|.+++||++++.++.+.+++.+++.++++.||+||++.+.....+.......+++
T Consensus 264 ~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 343 (523)
T PRK08316 264 FFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSA 343 (523)
T ss_pred EEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCc
Confidence 99999999999988766666788999999999999999999999999889999999999998876654443334456789
Q ss_pred ccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce------e--eE
Q 014435 337 GTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN------D--FF 396 (424)
Q Consensus 337 G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~------d--i~ 396 (424)
|+|+++++++|+| +++++++.|+.|||+++|+.++.+| ++||+|||+|+++++|.+ | ++
T Consensus 344 G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~ 422 (523)
T PRK08316 344 GRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDEEGYITVVDRKKDMIK 422 (523)
T ss_pred ccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcCCceEEEecccccEEE
Confidence 9999999999999 6789999999999999999999998 569999999999999987 3 88
Q ss_pred eeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 397 CKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 397 ~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++|++|+|.+||+.|.++|+|.+++|+|
T Consensus 423 ~~G~~i~~~~iE~~l~~~~~v~~~~v~~ 450 (523)
T PRK08316 423 TGGENVASREVEEALYTHPAVAEVAVIG 450 (523)
T ss_pred eCCeEECHHHHHHHHHhCCChheEeEec
Confidence 9999999999999999999999999875
No 34
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-55 Score=428.07 Aligned_cols=379 Identities=23% Similarity=0.336 Sum_probs=318.1
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~-~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 99 (424)
.++.+||+||.++++++|++|++ .|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..+++++++++
T Consensus 24 ~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 24 EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 46789999999999999999985 79999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccchHHHhcCCCCe---EEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 100 VITVPELWDKVKDLNLPA---VLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 100 ii~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++++++....+....... ..+. +.++++...... .......++++++++|||||||.
T Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~----~~~~~~~~~~~~~i~~TSGTTG~ 163 (496)
T PRK06839 104 LFVEKTFQNMALSMQKVSYVQRVIS----------------ITSLKEIEDRKI----DNFVEKNESASFIICYTSGTTGK 163 (496)
T ss_pred EEEcHHHHHHHHHhhhccCcceEEE----------------ecchHhhhccCC----CCCCCCCCCCcEEEEeCCCCCCC
Confidence 999987766554432110 0000 001122221111 11223456889999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
||+|.++|.++............ ...+++++..+|++|.+|+....+.++..|+++++++.+++..+++.++++++|+
T Consensus 164 PK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~ 241 (496)
T PRK06839 164 PKGAVLTQENMFWNALNNTFAID--LTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTV 241 (496)
T ss_pred CcEEEEEhHHHHHHHHHHHHHcC--CCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeE
Confidence 99999999998765444333333 3345899999999999999777788999999999998899999999999999999
Q ss_pred EEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcc
Q 014435 257 WWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSA 336 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 336 (424)
+.++|.+++.+++.......+++++|.+++||+++++++.+.+++. ++++.+.||+||++...............+++
T Consensus 242 ~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 319 (496)
T PRK06839 242 VMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFMLSEEDARRKVGSI 319 (496)
T ss_pred EEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEecccccccccCCCC
Confidence 9999999999998876666678999999999999999999999987 79999999999998755544333334567899
Q ss_pred ccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-------e-eE
Q 014435 337 GTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D-FF 396 (424)
Q Consensus 337 G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d-i~ 396 (424)
|+|+++++++|+| ++++.++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+ | ++
T Consensus 320 G~p~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~ 398 (496)
T PRK06839 320 GKPVLFCDYELID-ENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDEDGFVYIVGRKKEMII 398 (496)
T ss_pred cccCCCceEEEEC-CCcCCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcCCCcEEEeccccceEE
Confidence 9999999999999 5777799999999999999999999 578999999999999876 3 88
Q ss_pred eeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 397 CKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 397 ~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
.+|++|+|.+||++|.++|+|.+|+|+|
T Consensus 399 ~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 426 (496)
T PRK06839 399 SGGENIYPLEVEQVINKLSDVYEVAVVG 426 (496)
T ss_pred ECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999999999999985
No 35
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.8e-55 Score=437.38 Aligned_cols=385 Identities=22% Similarity=0.275 Sum_probs=300.4
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCC-----HHHHHHHHHhcC
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT-----VSELSKQVKDSN 96 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~-----~~~i~~~l~~~~ 96 (424)
++.+||+||.++++++|++|.++|+++||+|+++++|+++|++++|||+++|++++|+++.++ .+++.++++.++
T Consensus 67 ~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~ 146 (614)
T PRK08180 67 WRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLT 146 (614)
T ss_pred eeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCC
Confidence 357999999999999999999999999999999999999999999999999999999999988 799999999999
Q ss_pred CeEEEEccc--chHHHhcCCC-C-eEEEecCCCccccccccCCCcccchhhhhhccCCCC-CCCCCCCCCCCEEEEecCC
Q 014435 97 PKLVITVPE--LWDKVKDLNL-P-AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT-DIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 97 ~~~ii~~~~--~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TS 171 (424)
++++|+++. ....+..... . .++..... ........+++++....... ........++|+++|+|||
T Consensus 147 ~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTS 218 (614)
T PRK08180 147 PGLVFADDGAAFARALAAVVPADVEVVAVRGA--------VPGRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTS 218 (614)
T ss_pred CcEEEEcCHHHHHHHHhhhccCCceEEEecCC--------CCCcccccHHHHhccccccchhhhccCCCcCceEEEEECC
Confidence 999999864 2222222111 1 11111110 00011234555443221100 1111234578999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CC---HHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FD---IEMALR 247 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~---~~~~~~ 247 (424)
||||.||+|++||+++.................++++++.+|++|.+|+...++.++..|+++++.+. ++ ...+++
T Consensus 219 GTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~ 298 (614)
T PRK08180 219 GSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLR 298 (614)
T ss_pred CCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHH
Confidence 99999999999999998877665544433222448999999999999987778889999999998753 33 357788
Q ss_pred HHHHccceEEEechHHHHHHHhcccc----ccCCCCCeeEEEecCCCCCHHHHHHHHHh----CC-CCeEEecccCccCC
Q 014435 248 AIEKYRVTVWWVVPPIILALAKNSLV----RKFDISSLKLVGSGAAPLGKELMEDCQKN----IP-GATIFQGYGMTETC 318 (424)
Q Consensus 248 ~i~~~~~t~~~~~p~~~~~l~~~~~~----~~~~~~~lr~~~~~g~~~~~~~~~~~~~~----~~-~~~~~~~yG~tE~~ 318 (424)
.++++++|+++++|.++..|++.... ....++++|.+++||+++++++.+++++. ++ ++.+++.||+||++
T Consensus 299 ~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~ 378 (614)
T PRK08180 299 NLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETA 378 (614)
T ss_pred HHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccC
Confidence 89999999999999999988764321 23357899999999999999999999874 32 37899999999998
Q ss_pred CceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceE
Q 014435 319 APISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFS 385 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g 385 (424)
++++..... ..+.+++|+|+++++++|+|+ |..|||+++|++++.|| ++||+|||+|
T Consensus 379 ~~~~~~~~~--~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg 448 (614)
T PRK08180 379 PSATFTTGP--LSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAV 448 (614)
T ss_pred CceEecccc--cCCCCcccCccCCcEEEEecC--------CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceE
Confidence 766654333 346789999999999999983 44699999999999999 4799999999
Q ss_pred EE----ecCCce-------e-eE-eeeeeeC--hhhHHHHHhcCCCcccceecC
Q 014435 386 YF----RSNDHN-------D-FF-CKLFQVA--PAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 386 ~~----~~~g~~-------d-i~-~~G~~v~--~~~iE~~l~~~p~V~~a~v~g 424 (424)
++ +++|.+ | ++ .+|++|+ |.|+|.++.+||.|++|+|+|
T Consensus 449 ~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g 502 (614)
T PRK08180 449 RFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITG 502 (614)
T ss_pred EecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEc
Confidence 99 356666 3 55 5798776 788899999999999999986
No 36
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.5e-55 Score=427.63 Aligned_cols=393 Identities=27% Similarity=0.417 Sum_probs=328.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+++||+||.+.+.++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++
T Consensus 27 ~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 106 (513)
T PRK07656 27 GDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKAL 106 (513)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEE
Confidence 44679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCC-----CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 101 ITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 101 i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
+++++......... ...++........ ........++++..... ...+.....++++++++|||||||
T Consensus 107 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG 179 (513)
T PRK07656 107 FVLGLFLGVDYSATTRLPALEHVVICETEEDD-----PHTEKMKTFTDFLAAGD--PAERAPEVDPDDVADILFTSGTTG 179 (513)
T ss_pred EEchhhHHHHHHHHhccCCccEEEEEcCcccc-----cCccccccHHHHHhcCC--CCCCcCCCCCCceEEEEeCCCCCC
Confidence 99987655443321 1122222111110 00112234455543322 112233457789999999999999
Q ss_pred CcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccce
Q 014435 176 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVT 255 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 255 (424)
.||+|.++|.++............. ...+++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|
T Consensus 180 ~PK~v~~s~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 257 (513)
T PRK07656 180 RPKGAMLTHRQLLSNAADWAEYLGL--TEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERIT 257 (513)
T ss_pred CCCEEEEecHHHHHHHHHHHHhhCC--CCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCe
Confidence 9999999999998877665555444 33489999999999999987789999999999998888999999999999999
Q ss_pred EEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCC-eEEecccCccCCCceeecCCCCC-ccCC
Q 014435 256 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA-TIFQGYGMTETCAPISLENPLVG-VRRS 333 (424)
Q Consensus 256 ~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~yG~tE~~~~~~~~~~~~~-~~~~ 333 (424)
++.++|.++..+.+........++++|.+++||+++++++.+++++.++ . .+++.||+||+++++........ ....
T Consensus 258 ~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 336 (513)
T PRK07656 258 VLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELG-VDIVLTGYGLSEASGVTTFNRLDDDRKTVA 336 (513)
T ss_pred EEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcC-CCceEeEEccccCCCceeecCccccccccC
Confidence 9999999999999887766667899999999999999999999999985 6 89999999999877766544321 1226
Q ss_pred CccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------
Q 014435 334 GSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN------- 393 (424)
Q Consensus 334 ~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~------- 393 (424)
+++|.|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 337 ~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~ 415 (513)
T PRK07656 337 GTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKK 415 (513)
T ss_pred CCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEeccc
Confidence 7899999999999999 6899999999999999999999999 578999999999999876
Q ss_pred e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++++|++++|.+||++|.++|+|.+++|+|
T Consensus 416 d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 447 (513)
T PRK07656 416 DMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIG 447 (513)
T ss_pred ceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEe
Confidence 3 899999999999999999999999999874
No 37
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.5e-55 Score=429.09 Aligned_cols=406 Identities=23% Similarity=0.406 Sum_probs=319.9
Q ss_pred cCCCCCCC-CCCCcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 14 SLRPPLVL-PSDPSFSMFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 14 ~~~~~~~~-~~~~Ty~el~~~~~~~a~~L~~-~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
++.+++.. .+.+||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.++
T Consensus 38 p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~ 117 (562)
T PRK05677 38 ADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQ 117 (562)
T ss_pred CCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeecCCCCCHHHHHHH
Confidence 44555443 4579999999999999999997 599999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEcccchHHHhcCC----CCeEEEecCCCccc-cc---c------------ccCCCcccchhhhhhccCCC
Q 014435 92 VKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSS-SG---L------------ISRSSKIVSFHDLIELSGSV 151 (424)
Q Consensus 92 l~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~---~------------~~~~~~~~~~~~~~~~~~~~ 151 (424)
+++++++++|++.+....+..+. .+.++......... .. . .........+.+.+.....
T Consensus 118 l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 196 (562)
T PRK05677 118 FNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHLPQAVKFNDALAKGAG- 196 (562)
T ss_pred HhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccCCcccccHHHHHhcCCC-
Confidence 99999999999876654433221 12222211100000 00 0 0000112233333322211
Q ss_pred CCCCCCCCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhc
Q 014435 152 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQK 230 (424)
Q Consensus 152 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 230 (424)
.........++++++++|||||||.||+|+++|+++.............. ....+.+++.+|++|.+++...++..+..
T Consensus 197 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~ 276 (562)
T PRK05677 197 QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLI 276 (562)
T ss_pred CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHc
Confidence 11122334679999999999999999999999999987655443332211 22237889999999999987677777888
Q ss_pred CceEEecC-CCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEE
Q 014435 231 GNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIF 309 (424)
Q Consensus 231 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~ 309 (424)
|.+.++.+ ..++..+++.++++++|+++++|+++..+..........++++|.+++||+++++++.+.|.+.+ +++++
T Consensus 277 g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~ 355 (562)
T PRK05677 277 GNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQLATAERWKEVT-GCAIC 355 (562)
T ss_pred CCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCHHHHHHHHHHc-CCCee
Confidence 87766554 57899999999999999999999999999876554455678999999999999999999999987 69999
Q ss_pred ecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------h
Q 014435 310 QGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------E 376 (424)
Q Consensus 310 ~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~ 376 (424)
+.||+||+++++...... ...++++|.|+++++++|+| ++++.++.|+.|||+++|+.++.|| +
T Consensus 356 ~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~ 432 (562)
T PRK05677 356 EGYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSD 432 (562)
T ss_pred ccCCccccCcceeecCcc--CCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEecCccchhhcCCchhhhhccCCC
Confidence 999999988766554332 34567899999999999999 5789999999999999999999999 5
Q ss_pred hccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 377 LTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 377 ~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+||+|||+|+++++|.+ | ++.+|++|+|.+||++|.+||+|.+++|+|
T Consensus 433 g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g 488 (562)
T PRK05677 433 GWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIG 488 (562)
T ss_pred CcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEe
Confidence 79999999999999987 3 889999999999999999999999999985
No 38
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-55 Score=438.04 Aligned_cols=396 Identities=22% Similarity=0.294 Sum_probs=309.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..++++++++++|
T Consensus 82 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li 161 (629)
T PRK10524 82 ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIV 161 (629)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEE
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecccch---------HHHh---c-C--CCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEE
Q 014435 102 TVPELW---------DKVK---D-L--NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 166 (424)
Q Consensus 102 ~~~~~~---------~~~~---~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (424)
+++... ..+. . . ....+++........ . ........+.++...... ...+.....++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~ 237 (629)
T PRK10524 162 SADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM-A--RVAGRDVDYATLRAQHLG-ARVPVEWLESNEPSY 237 (629)
T ss_pred EccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-C--cccCCcccHHHHHhcCCC-CCCCceeeCCCCceE
Confidence 976421 1111 1 1 112222221110000 0 000112234444332111 111222346789999
Q ss_pred EecCCCCCCCcchhhhcHHHHHHHHHHH-HhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CC
Q 014435 167 LLYSSGTTGVSKGVILTHKNFIAASLMI-SAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FD 241 (424)
Q Consensus 167 i~~TSGtTG~pK~v~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~ 241 (424)
++|||||||.||+|+++|.++....... ...... ..++++++..|+.|..+....++.++..|+++++.+. .+
T Consensus 238 il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~ 315 (629)
T PRK10524 238 ILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGG--KAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPD 315 (629)
T ss_pred EEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCC--CCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCC
Confidence 9999999999999999999875443322 222222 3348999999999998876678899999999998752 47
Q ss_pred HHHHHHHHHHccceEEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCC
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCA 319 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 319 (424)
+..+++.++++++|+++++|++++.|.+.... ...++++||.+++||+++++++.+++.+.+ ++++++.||+||++.
T Consensus 316 ~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~ 394 (629)
T PRK10524 316 AGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVIDNYWQTETGW 394 (629)
T ss_pred hHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeEeccccccccc
Confidence 89999999999999999999999998875432 345678999999999999999999999988 589999999999875
Q ss_pred ceeecCCC--CCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCC---cchhh----------------hhc
Q 014435 320 PISLENPL--VGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPN---VTPVF----------------ELT 378 (424)
Q Consensus 320 ~~~~~~~~--~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~---~~~gy----------------~~~ 378 (424)
.+....+. ....+.+++|+|+++++++|+|++++++++.|+.|||+++||. ++.+| ++|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (629)
T PRK10524 395 PILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQV 474 (629)
T ss_pred hhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcE
Confidence 33332221 1134567899999999999999558999999999999999984 34444 368
Q ss_pred cccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 379 VNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 379 ~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|+|||+|+++++|.+ | ++++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 475 ~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg 528 (629)
T PRK10524 475 YSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVAVVG 528 (629)
T ss_pred EEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEEEEc
Confidence 999999999999987 3 999999999999999999999999999985
No 39
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.7e-55 Score=430.42 Aligned_cols=402 Identities=28% Similarity=0.394 Sum_probs=324.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++
T Consensus 54 ~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 133 (573)
T PRK05605 54 FGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVA 133 (573)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEE
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCC----CCeEEEecCCC-cccc----------c-------cccCCCcccchhhhhhccCCC--CCCCC
Q 014435 101 ITVPELWDKVKDLN----LPAVLLGSKDK-VSSS----------G-------LISRSSKIVSFHDLIELSGSV--TDIPD 156 (424)
Q Consensus 101 i~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~----------~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~ 156 (424)
|++++....+..+. .+.++...... .... . ..........++++....... .....
T Consensus 134 i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (573)
T PRK05605 134 IVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSH 213 (573)
T ss_pred EechhhHHHHHhhhhccccceeEeeecccccccccccccccccccccccccccccCCCcceeHHHHhhccccccccccCC
Confidence 99887655543322 11111111000 0000 0 000011233444444321110 00122
Q ss_pred CCCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEe
Q 014435 157 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 236 (424)
Q Consensus 157 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 236 (424)
.....+++++++|||||||.||+|.++|+++...+.............++++++.+|++|.+|+...++.++..|+++++
T Consensus 214 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~ 293 (573)
T PRK05605 214 PRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVL 293 (573)
T ss_pred CCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEE
Confidence 33567899999999999999999999999988776543332221123358999999999999987777788999999999
Q ss_pred cCCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCcc
Q 014435 237 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTE 316 (424)
Q Consensus 237 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE 316 (424)
.+.+++..+++.++++++|++.++|.+++.|.+.......+++++|.+++||+++++++.+.+.+.+ +..+++.||+||
T Consensus 294 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-~~~i~~~YG~TE 372 (573)
T PRK05605 294 LPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAMALPVSTVELWEKLT-GGLLVEGYGLTE 372 (573)
T ss_pred eCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCCcCCHHHHHHHHHHh-CCCeecccccch
Confidence 9888999999999999999999999999999987766666789999999999999999999999887 689999999999
Q ss_pred CCCceeecCCCCCccCCCccccccCCcEEEEeeCCC-CccCCCCCceeEEEecCCcchhh------------hhccccCc
Q 014435 317 TCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDT-LKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNL 383 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~-~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD 383 (424)
++++++..... .....+++|+|+++++++|+|+++ +++++.|+.|||+++|+.++.|| ++||+|||
T Consensus 373 ~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD 451 (573)
T PRK05605 373 TSPIIVGNPMS-DDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGD 451 (573)
T ss_pred hchhhhcCCcc-cCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCC
Confidence 98766654332 134567899999999999999766 68999999999999999999999 35999999
Q ss_pred eEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 384 FSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 384 ~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|+++++|.+ | ++.+|++|+|.+||+++.+||.|.+++|+|
T Consensus 452 ~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~ 500 (573)
T PRK05605 452 VVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVG 500 (573)
T ss_pred EEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEe
Confidence 9999999977 3 889999999999999999999999999985
No 40
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-55 Score=441.20 Aligned_cols=389 Identities=19% Similarity=0.240 Sum_probs=300.5
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++.+||+||.++++++|+.|+++|+++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 197 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAI 197 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEE
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCC-----CCeEEEecCCCccccccccCCCcccchhhhhhccC--CCCCCCCCCCCCCCEEEEecCCCC
Q 014435 101 ITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG--SVTDIPDVSVKQTDAAALLYSSGT 173 (424)
Q Consensus 101 i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGt 173 (424)
+++.+....+.... ....++..+..... .........++++++.... ...........++|+++++|||||
T Consensus 198 v~~~~~~~~l~~~~~~~~~~~~~ii~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGT 275 (700)
T PTZ00216 198 VCNGKNVPNLLRLMKSGGMPNTTIIYLDSLPAS--VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGT 275 (700)
T ss_pred EECHHHHHHHHHhhhhccCCceEEEEECCCccc--cccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCC
Confidence 99876554432211 11112221111000 0011223456777665441 111111234468999999999999
Q ss_pred CCCcchhhhcHHHHHHHHHHHHhhhhh--c-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHH---
Q 014435 174 TGVSKGVILTHKNFIAASLMISAHQEL--V-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALR--- 247 (424)
Q Consensus 174 TG~pK~v~~t~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~--- 247 (424)
||.||||++||+++.+.+......... . ...++++++++|++|.++.. .....+..|+++++. ++..+.+
T Consensus 276 TG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~v~~~---~~~~l~~~~~ 351 (700)
T PTZ00216 276 TGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFG-VTNIFLARGALIGFG---SPRTLTDTFA 351 (700)
T ss_pred CCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHH-HHHHHHHcCCEEEEC---CHHHhhhhhc
Confidence 999999999999998876655433211 1 13458999999999999985 445567888887764 4455544
Q ss_pred ----HHHHccceEEEechHHHHHHHhccccc-----------------------------------------cCCCCCee
Q 014435 248 ----AIEKYRVTVWWVVPPIILALAKNSLVR-----------------------------------------KFDISSLK 282 (424)
Q Consensus 248 ----~i~~~~~t~~~~~p~~~~~l~~~~~~~-----------------------------------------~~~~~~lr 282 (424)
.++++++|++.++|.+++.+.+..... ....+++|
T Consensus 352 ~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr 431 (700)
T PTZ00216 352 RPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVR 431 (700)
T ss_pred cccchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEE
Confidence 688999999999999998876431100 00015899
Q ss_pred EEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCC-CccCCCCCc
Q 014435 283 LVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDT-LKPLPPNQL 361 (424)
Q Consensus 283 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~-~~~~~~g~~ 361 (424)
.+++||+++++++.+.++..+ + .+++.||+||+++.++..... ....+++|+|+++++++|+|.++ ....++++.
T Consensus 432 ~i~~GGa~l~~~~~~~~~~~~-~-~l~~~YG~TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~ 507 (700)
T PTZ00216 432 AMLSGGGPLSAATQEFVNVVF-G-MVIQGWGLTETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPR 507 (700)
T ss_pred EEEECCCCCCHHHHHHHHHHh-h-hHhhccCcccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCC
Confidence 999999999999998887776 5 999999999998766554433 45678999999999999999543 223456678
Q ss_pred eeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e-eE-eeeeeeChhhHHHHHhcCCCccc
Q 014435 362 GEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D-FF-CKLFQVAPAELEGLLVSHPEILD 419 (424)
Q Consensus 362 Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d-i~-~~G~~v~~~~iE~~l~~~p~V~~ 419 (424)
|||+++|+.++.|| ++||+|||+|++++||.+ | ++ .+|++|+|.+||+++.+||.|.+
T Consensus 508 GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~ 587 (700)
T PTZ00216 508 GEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVP 587 (700)
T ss_pred ceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCccc
Confidence 99999999999999 679999999999999988 3 76 79999999999999999999997
No 41
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.8e-54 Score=421.56 Aligned_cols=389 Identities=25% Similarity=0.361 Sum_probs=322.0
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++
T Consensus 39 ~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 118 (542)
T PRK07786 39 LGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVV 118 (542)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEE
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCC-----CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 101 ITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 101 i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
++++.....+.... ...++...+ ........++++...... ..+......+++++++|||||||
T Consensus 119 i~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGTTG 187 (542)
T PRK07786 119 VTEAALAPVATAVRDIVPLLSTVVVAGG---------SSDDSVLGYEDLLAEAGP--AHAPVDIPNDSPALIMYTSGTTG 187 (542)
T ss_pred EEccchHHHHHHhhhccCccceEEEecC---------CCcccccCHHHHhhccCC--CCCCCCCCCCCeEEEEeCCCCCc
Confidence 99987665543321 111222111 011122345555433221 12223445678999999999999
Q ss_pred CcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC--CCCHHHHHHHHHHcc
Q 014435 176 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG--KFDIEMALRAIEKYR 253 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~ 253 (424)
.||+|.++|+++...+......... ...++++++..|++|.+|+ ..++.++..|+++++.+ .+++..+++.+++++
T Consensus 188 ~PK~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~ 265 (542)
T PRK07786 188 RPKGAVLTHANLTGQAMTCLRTNGA-DINSDVGFVGVPLFHIAGI-GSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEK 265 (542)
T ss_pred cchhhhhhHHHHHHHHHHHHHhcCC-CCCCceEEEecchHHHHHH-HHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcC
Confidence 9999999999998776655444433 2345899999999999998 47888999999999864 579999999999999
Q ss_pred ceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCC
Q 014435 254 VTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRS 333 (424)
Q Consensus 254 ~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~ 333 (424)
+|+++++|+++..+.......... .++|.+++||+++++++++++.+.+++.++++.||+||++++.+...........
T Consensus 266 ~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~ 344 (542)
T PRK07786 266 VTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKL 344 (542)
T ss_pred CeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccC
Confidence 999999999999998875544333 3799999999999999999999999889999999999998765543332223455
Q ss_pred CccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-------e
Q 014435 334 GSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D 394 (424)
Q Consensus 334 ~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d 394 (424)
+++|+|++++.++|+| ++++.++.|+.|||+++|+.++.|| ++||+|||+++++++|.+ |
T Consensus 345 ~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~~g~~~i~GR~~d 423 (542)
T PRK07786 345 GSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDEEGYVWVVDRKKD 423 (542)
T ss_pred CCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcCCceEEEEecccc
Confidence 7899999999999999 6889999999999999999999999 469999999999999876 3
Q ss_pred -eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 395 -FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 395 -i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++++|++|+|.+||++|.+||.|.+|+|+|
T Consensus 424 ~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 454 (542)
T PRK07786 424 MIISGGENIYCAEVENVLASHPDIVEVAVIG 454 (542)
T ss_pred eEEeCCEEECHHHHHHHHHhCCCccEEEEEe
Confidence 899999999999999999999999999975
No 42
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-56 Score=386.01 Aligned_cols=388 Identities=23% Similarity=0.272 Sum_probs=329.7
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeE
Q 014435 20 VLPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 20 ~~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 99 (424)
+.++.|||+||.++++++|..|++.||++||+|.+.+||..+|++++||++++|+.+|.-=|.....+|...++..+++.
T Consensus 49 d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~ 128 (542)
T COG1021 49 DGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAAL 128 (542)
T ss_pred cCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchh
Confidence 45577999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred EEEcccc--------hHHH-hcC-CCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEec
Q 014435 100 VITVPEL--------WDKV-KDL-NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLY 169 (424)
Q Consensus 100 ii~~~~~--------~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 169 (424)
+|.+... ...+ .+. ..+.+++..+.. .....+..+..... ...+..+.+++++++...
T Consensus 129 ~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~-----------~~~~~~~~~~~~a~-~~~~a~~~~~~~vA~fqL 196 (542)
T COG1021 129 LIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAE-----------HPSVLEAALCHPAG-LFTPAPPADAGEVAFFQL 196 (542)
T ss_pred eeechhhcccCcHHHHHHHHhhCCcceEEEEccCCC-----------CcchhhhhhhCccc-cCCcCCCCCCCceEEEEe
Confidence 9998532 1111 111 124444442211 11112222221111 233345667889999999
Q ss_pred CCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHH-HHHHHhhcCceEEecCCCCHHHHHHH
Q 014435 170 SSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMGKFDIEMALRA 248 (424)
Q Consensus 170 TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~ 248 (424)
+.||||.||.|++||..+..++......+++... .++++.+|..|.+-+.. ..++.+..|+++|+.+..++...+.+
T Consensus 197 SGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~--tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~l 274 (542)
T COG1021 197 SGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQ--TVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPL 274 (542)
T ss_pred cCCCCCCCccccccccceeeeeeehhhhhCcCcc--ceEEEecccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHH
Confidence 9999999999999999999988888888887665 99999999999987753 37888999999999999999999999
Q ss_pred HHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC
Q 014435 249 IEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV 328 (424)
Q Consensus 249 i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~ 328 (424)
|+++++|+...+|.+...++.+.+....+++|||.+-+||+.+++.+.+++...+ ||.+-+++||.| |.+....-.+.
T Consensus 275 Ierh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQVFGMAE-GLvnyTRLDDp 352 (542)
T COG1021 275 IERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQVFGMAE-GLVNYTRLDDP 352 (542)
T ss_pred HHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHHHHhhhhh-hhhcccccCCc
Confidence 9999999999999999999999988889999999999999999999999999999 799999999999 43443333333
Q ss_pred CccCCCcccccc-CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-
Q 014435 329 GVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN- 393 (424)
Q Consensus 329 ~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~- 393 (424)
.+.-..+.|+|+ |.-+++|+| ++|+++++||+|+|..+||...+|| +++|+|||+.+++++|.+
T Consensus 353 ~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~ 431 (542)
T COG1021 353 PEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLV 431 (542)
T ss_pred hHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEE
Confidence 355566889998 677999999 8999999999999999999999999 889999999999999998
Q ss_pred ------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| |+.+|+||-.+|||+.|..||.|.+|++|+
T Consensus 432 V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVa 469 (542)
T COG1021 432 VEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVA 469 (542)
T ss_pred EEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhc
Confidence 5 999999999999999999999999999874
No 43
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-54 Score=434.59 Aligned_cols=394 Identities=19% Similarity=0.208 Sum_probs=307.3
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+++||+||.++++++|+.|++.|+++||+|++++||++++++++|||+++|++++|+++.++.+++..++++++++++|+
T Consensus 207 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit 286 (728)
T PLN03052 207 NRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFT 286 (728)
T ss_pred EEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchH---------HHhcCC-CCeEEEecCCCccccccccCCCcccchhhhhhccCCC---CCCCCCCCCCCCEEEEec
Q 014435 103 VPELWD---------KVKDLN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV---TDIPDVSVKQTDAAALLY 169 (424)
Q Consensus 103 ~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~ 169 (424)
++.... .+.... ...+++........ .........+++++...... .........++++++|+|
T Consensus 287 ~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~Ily 363 (728)
T PLN03052 287 QDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVR---VKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILF 363 (728)
T ss_pred cCccccCCcccchHHHHHHhcCCcEEEEeCCCCccc---cccccCCccHHHHHhccccccccccccccccCCCCcEEEEe
Confidence 875432 111111 12222221110000 00011223455554322110 111122235689999999
Q ss_pred CCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHH
Q 014435 170 SSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRA 248 (424)
Q Consensus 170 TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~ 248 (424)
||||||.||+|+++|.+++............ ..++++++..|+.|+.+.. .++.+|..|+++++.+. .++..+++.
T Consensus 364 TSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l--~~~d~~~~~~~l~w~~g~~-~v~~~L~~Gat~vl~~g~p~~~~~~~~ 440 (728)
T PLN03052 364 SSGTTGEPKAIPWTQLTPLRAAADAWAHLDI--RKGDIVCWPTNLGWMMGPW-LVYASLLNGATLALYNGSPLGRGFAKF 440 (728)
T ss_pred cCCCCCCCceEEECchHHHHHHHHHHHhcCC--CCCcEEEECCCcHHHhHHH-HHHHHHHhCCEEEEeCCCCCCChHHHH
Confidence 9999999999999999876654443333333 3449999999999999984 67799999999999864 456789999
Q ss_pred HHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC
Q 014435 249 IEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV 328 (424)
Q Consensus 249 i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~ 328 (424)
++++++|++.++|++++.|.+.......++++||.++++|++++++...++.+.++...+++.||+||+++.+....+..
T Consensus 441 i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~ 520 (728)
T PLN03052 441 VQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQ 520 (728)
T ss_pred HHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCC
Confidence 99999999999999999998775445667899999999999999999888888764468999999999876544333221
Q ss_pred CccCCCccccccCCcEEEEeeCCCCccCCCCC--ceeEEEecCCcc-----------hhh-h------h--ccccCceEE
Q 014435 329 GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQ--LGEIWVRGPNVT-----------PVF-E------L--TVNCNLFSY 386 (424)
Q Consensus 329 ~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~~~~~~-----------~gy-~------~--~~~TgD~g~ 386 (424)
....+++|.|.+|++++|+| ++|++++.|+ .|||+++++... ..| . + ||+|||+++
T Consensus 521 -~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~ 598 (728)
T PLN03052 521 -PQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFE 598 (728)
T ss_pred -CCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEE
Confidence 34567899999999999999 7899999985 699999765321 123 1 2 789999999
Q ss_pred EecCCce------e--eEeeeeeeChhhHHHHHh-cCCCcccceecC
Q 014435 387 FRSNDHN------D--FFCKLFQVAPAELEGLLV-SHPEILDAVVIP 424 (424)
Q Consensus 387 ~~~~g~~------d--i~~~G~~v~~~~iE~~l~-~~p~V~~a~v~g 424 (424)
++++|.+ | |+++|++|+|.|||++|. .||+|.||+|+|
T Consensus 599 ~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg 645 (728)
T PLN03052 599 RTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIG 645 (728)
T ss_pred ECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEe
Confidence 9999987 3 999999999999999995 799999999986
No 44
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=3.8e-54 Score=421.59 Aligned_cols=386 Identities=22% Similarity=0.255 Sum_probs=314.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+++||+||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|++++++++..+.+++.++++.++++++
T Consensus 45 ~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~l 124 (527)
T TIGR02275 45 GNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALY 124 (527)
T ss_pred CCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEE
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchH--------HHhcCC--CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecC
Q 014435 101 ITVPELWD--------KVKDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYS 170 (424)
Q Consensus 101 i~~~~~~~--------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 170 (424)
+++..... .+.... ...+...... . ........+.... ...+.....++++++++||
T Consensus 125 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~T 191 (527)
T TIGR02275 125 IIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQT--------R---VEAELFLWLESPA--EPVKFPPTKSDEVAFFQLS 191 (527)
T ss_pred EEcCcccccchHHHHHHHHhhCCcceEEEEecCC--------C---CcchhhHHhhCcC--ccccCCCCCCCccEEEEeC
Confidence 99865321 111111 1111111110 0 0001111111111 1112234567899999999
Q ss_pred CCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHH-HHHHHhhcCceEEecCCCCHHHHHHHH
Q 014435 171 SGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMGKFDIEMALRAI 249 (424)
Q Consensus 171 SGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i 249 (424)
|||||.||+|.++|+++............. ..+++++..+|++|.+++.. .++.++..|+++++.+.+++..+++.+
T Consensus 192 SGTTG~PKgv~~s~~~~~~~~~~~~~~~~~--~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i 269 (527)
T TIGR02275 192 GGSTGTPKLIPRTHNDYYYSVRRSVEICWL--TQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLI 269 (527)
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHhhcCC--CcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHH
Confidence 999999999999999998877665554444 33489999999999999864 377889999999998888999999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++++|++.++|.++..+.+.......+++++|.+++||+++++++.+++.+.+ +.++++.||+||++..... .....
T Consensus 270 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~-~~~~~ 347 (527)
T TIGR02275 270 ERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQVFGMAEGLVNYTR-LDDPA 347 (527)
T ss_pred HHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEeeeccCccCccccC-CCCcc
Confidence 999999999999999999887766666788999999999999999999999988 6999999999996533222 22212
Q ss_pred ccCCCcccccc-CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce--
Q 014435 330 VRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-- 393 (424)
Q Consensus 330 ~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-- 393 (424)
....+++|+|+ ++.+++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 348 ~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~ 426 (527)
T TIGR02275 348 EIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVV 426 (527)
T ss_pred ccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEE
Confidence 33456889999 478999999 6889999999999999999999999 579999999999999976
Q ss_pred -----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||++|.+||+|++|+|+|
T Consensus 427 ~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 463 (527)
T TIGR02275 427 VGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVS 463 (527)
T ss_pred EecccceeecCCEEECHHHHHHHHHhCCCceEEEEEe
Confidence 3 889999999999999999999999999985
No 45
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-54 Score=433.83 Aligned_cols=392 Identities=20% Similarity=0.234 Sum_probs=306.5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+++||+||.++++++|+.|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~ 192 (655)
T PRK03584 113 RELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIA 192 (655)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccch---------HHHh----cCC-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEe
Q 014435 103 VPELW---------DKVK----DLN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALL 168 (424)
Q Consensus 103 ~~~~~---------~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 168 (424)
++... ..+. ... ...+++...... ............+++++..... ..........+++++|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il 269 (655)
T PRK03584 193 VDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGP--AAAAAALPGALLWEDFLAPAEA-AELEFEPVPFDHPLWIL 269 (655)
T ss_pred ccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCC--cccccccCCcccHHHHhhcccc-CCCCceecCCCCcEEEE
Confidence 87532 1111 111 112222211100 0000111223445555442111 12223345679999999
Q ss_pred cCCCCCCCcchhhhcHHHHHHH-HHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CCHH
Q 014435 169 YSSGTTGVSKGVILTHKNFIAA-SLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIE 243 (424)
Q Consensus 169 ~TSGtTG~pK~v~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~ 243 (424)
|||||||.||+|+++|++++.. .......... ..++++++..++.|.... .++.+|..|+++++.+. .++.
T Consensus 270 yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~ 345 (655)
T PRK03584 270 YSSGTTGLPKCIVHGHGGILLEHLKELGLHCDL--GPGDRFFWYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPN 345 (655)
T ss_pred ecCCCCCCCceEEECccHHHHHHHHHHHHhcCC--CCCCEEEEcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHH
Confidence 9999999999999999987543 3333333333 334899999998887543 45688999999998752 5899
Q ss_pred HHHHHHHHccceEEEechHHHHHHHhccc--cccCCCCCeeEEEecCCCCCHHHHHHHHHhCC-CCeEEecccCccCCCc
Q 014435 244 MALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIP-GATIFQGYGMTETCAP 320 (424)
Q Consensus 244 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~ 320 (424)
.+++.++++++|++.++|+++..+.+... ....++++||.+++||+++++++.+++.+.++ +..+++.||+||+++.
T Consensus 346 ~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~ 425 (655)
T PRK03584 346 VLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSC 425 (655)
T ss_pred HHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcc
Confidence 99999999999999999999998876532 23356889999999999999999999999883 5889999999997654
Q ss_pred eeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecC--Ccchhh-----------------hhcccc
Q 014435 321 ISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP--NVTPVF-----------------ELTVNC 381 (424)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gy-----------------~~~~~T 381 (424)
.....+. .....+++|.|.+|++++|+| ++++++ .|+.|||+++|+ .++.|| ++||+|
T Consensus 426 ~~~~~~~-~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~T 502 (655)
T PRK03584 426 FVGGNPL-LPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRH 502 (655)
T ss_pred cccCCCC-CCcCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeec
Confidence 4332221 134568899999999999999 678888 799999999996 566676 256899
Q ss_pred CceEEEecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 382 NLFSYFRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 382 gD~g~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
||+|++++||.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 503 GDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vvg 553 (655)
T PRK03584 503 GDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVIG 553 (655)
T ss_pred CCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEEEEe
Confidence 999999999987 3 999999999999999999999999999986
No 46
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-54 Score=418.54 Aligned_cols=373 Identities=22% Similarity=0.359 Sum_probs=309.4
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.+||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++++++++++
T Consensus 20 ~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii 99 (488)
T PRK09088 20 GRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLL 99 (488)
T ss_pred CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEE
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhh
Q 014435 102 TVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVI 181 (424)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 181 (424)
++++...... ....++++................++++++++|||||||.||+|.
T Consensus 100 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~ 154 (488)
T PRK09088 100 GDDAVAAGRT-------------------------DVEDLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQPKGVM 154 (488)
T ss_pred Ecchhhcccc-------------------------cccchhhhhhhccccccccCCCCCCCCceEEEeCCCCCCCCcEEE
Confidence 9865432100 001111111111110111122335688999999999999999999
Q ss_pred hcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHH--ccceEEEe
Q 014435 182 LTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEK--YRVTVWWV 259 (424)
Q Consensus 182 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~--~~~t~~~~ 259 (424)
++|+++...+......... ..++++++.+|++|.+|+...+..++..|+++++.+.+++...+..+.+ +++|++++
T Consensus 155 ~s~~~l~~~~~~~~~~~~~--~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 232 (488)
T PRK09088 155 LSERNLQQTAHNFGVLGRV--DAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFC 232 (488)
T ss_pred EehHHHHHHHHHHHHhhCC--CCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEee
Confidence 9999998776655444333 3448999999999999998778889999999999888899999988864 78999999
Q ss_pred chHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCC-CCCccCCCcccc
Q 014435 260 VPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENP-LVGVRRSGSAGT 338 (424)
Q Consensus 260 ~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~-~~~~~~~~~~G~ 338 (424)
+|.++..+.+........++++|.+++||++++....+.+.+. ++++++.||+||++++...... .....+.+++|.
T Consensus 233 ~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~ 310 (488)
T PRK09088 233 VPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGI 310 (488)
T ss_pred HHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCCcccc
Confidence 9999999987765455567899999999999999988888765 6899999999999865432211 111235678999
Q ss_pred ccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e-eEe
Q 014435 339 LVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D-FFC 397 (424)
Q Consensus 339 ~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d-i~~ 397 (424)
|.++++++|+| ++++.++.|+.|||+++|++++.|| ++||+|||+|+++++|.+ | ++.
T Consensus 311 ~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~ 389 (488)
T PRK09088 311 PTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFIS 389 (488)
T ss_pred CCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEe
Confidence 99999999999 6789999999999999999999999 468999999999999976 3 889
Q ss_pred eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 398 KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 398 ~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|++|+|.+||++|.++|.|.+++|+|
T Consensus 390 ~G~~i~~~~iE~~l~~~~~v~~~~v~~ 416 (488)
T PRK09088 390 GGENVYPAEIEAVLADHPGIRECAVVG 416 (488)
T ss_pred CCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 999999999999999999999999985
No 47
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.3e-54 Score=423.33 Aligned_cols=387 Identities=24% Similarity=0.323 Sum_probs=317.0
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+.+||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++++
T Consensus 48 ~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 127 (547)
T PRK06087 48 ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFA 127 (547)
T ss_pred CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc-----hHHHhc----CC-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 103 VPEL-----WDKVKD----LN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 103 ~~~~-----~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+... ...+.. +. ...++...... .......+.+++..... .........+++++++||||
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~a~i~~TSG 197 (547)
T PRK06087 128 PTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLA--------PATSSLSLSQIIADYEP--LTTAITTHGDELAAVLFTSG 197 (547)
T ss_pred ecccccccHHHHHHHHHhhCCCCcEEEEeCCcC--------CCcCccCHHHHhccCCc--ccCCCCCCCCCeEEEEeCCC
Confidence 7632 111111 11 11122211110 01112234444332221 11222345789999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHc
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKY 252 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~ 252 (424)
|||.||+|.++|+++............. ..++++++.+|++|.+|+...++.++..|+++++.+.+++..+++.++++
T Consensus 198 TTG~PK~v~~t~~~l~~~~~~~~~~~~~--~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~ 275 (547)
T PRK06087 198 TEGLPKGVMLTHNNILASERAYCARLNL--TWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQ 275 (547)
T ss_pred CCCCCcEEEEecHHHHHHHHHHHHhcCC--CCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHc
Confidence 9999999999999998776655444443 34499999999999999877788999999999999999999999999999
Q ss_pred cceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccC
Q 014435 253 RVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRR 332 (424)
Q Consensus 253 ~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~ 332 (424)
++|+++++|+.+..+++.......+++++|.+++||+++++++.+.+.+. ++++++.||+||++++............
T Consensus 276 ~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~ 353 (547)
T PRK06087 276 RCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLSVYGSTESSPHAVVNLDDPLSRF 353 (547)
T ss_pred CCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEEEecccccCCccccCCCcchhhc
Confidence 99999998888777777655555678899999999999999999988775 7999999999998876654332221234
Q ss_pred CCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce------
Q 014435 333 SGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN------ 393 (424)
Q Consensus 333 ~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~------ 393 (424)
.++.|.|++++.++++| +++.+++.|+.|||+++|+.++.|| ++||+|||+++++++|.+
T Consensus 354 ~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~ 432 (547)
T PRK06087 354 MHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRK 432 (547)
T ss_pred CCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecc
Confidence 56789999999999999 7889999999999999999999999 579999999999999977
Q ss_pred -e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||++|.++|+|.+++|+|
T Consensus 433 ~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 465 (547)
T PRK06087 433 KDIIVRGGENISSREVEDILLQHPKIHDACVVA 465 (547)
T ss_pred hhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 3 889999999999999999999999999985
No 48
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-54 Score=417.33 Aligned_cols=385 Identities=25% Similarity=0.330 Sum_probs=318.1
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+++||.||.+++.++|.+|.+.|++++++|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++
T Consensus 24 ~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~ 103 (497)
T PRK06145 24 RDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLL 103 (497)
T ss_pred CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEE
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchh
Q 014435 101 ITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGV 180 (424)
Q Consensus 101 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 180 (424)
+++++........ ...+...... .. .+..+..... .........++++++++|||||||.||+|
T Consensus 104 i~~~~~~~~~~~~-~~~~~~~~~~----------~~---~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PK~v 167 (497)
T PRK06145 104 LVDEEFDAIVALE-TPKIVIDAAA----------QA---DSRRLAQGGL--EIPPQAAVAPTDLVRLMYTSGTTDRPKGV 167 (497)
T ss_pred EEccchhhhhhcc-cceEEecCcc----------cc---hhHHHhccCC--CCCCCCCCCccceEEEEeCCCCCCCCcEE
Confidence 9987765433211 1111111000 00 0011110000 11112234678999999999999999999
Q ss_pred hhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEec
Q 014435 181 ILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVV 260 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 260 (424)
+++|+++............. ..+++++...|++|.+++....+.++..|+++++.+.+++..+++.++++++|.+.++
T Consensus 168 ~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 245 (497)
T PRK06145 168 MHSYGNLHWKSIDHVIALGL--TASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMA 245 (497)
T ss_pred EEecHHHHHHHHHHHHhhCC--CCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEeh
Confidence 99999987654443333333 3448999999999999987666788999999999988999999999999999999999
Q ss_pred hHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcccccc
Q 014435 261 PPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLV 340 (424)
Q Consensus 261 p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 340 (424)
|+++..++........+++++|.+++||+++++++++++.+.|++.++++.||+||+++..+...........+++|+|+
T Consensus 246 P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 325 (497)
T PRK06145 246 PVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRAL 325 (497)
T ss_pred HHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCC
Confidence 99999998876655566789999999999999999999999998899999999999987655433322233567899999
Q ss_pred CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-------e-eEeeee
Q 014435 341 AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D-FFCKLF 400 (424)
Q Consensus 341 ~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d-i~~~G~ 400 (424)
++++++++| ++++.++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+ | ++.+|+
T Consensus 326 ~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~ 404 (497)
T PRK06145 326 AHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGE 404 (497)
T ss_pred CCceEEEEC-CCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcCCCcEEEeccccceEEeCCe
Confidence 999999999 5789999999999999999999999 469999999999999877 3 899999
Q ss_pred eeChhhHHHHHhcCCCcccceecC
Q 014435 401 QVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 401 ~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|+|.+||+.|.++|+|.+++|++
T Consensus 405 ~v~~~~IE~~l~~~~~v~~~~v~~ 428 (497)
T PRK06145 405 NIASSEVERVIYELPEVAEAAVIG 428 (497)
T ss_pred EECHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999999999999999975
No 49
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.3e-53 Score=418.42 Aligned_cols=385 Identities=25% Similarity=0.343 Sum_probs=315.1
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++.+||+||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++.+++..++++++++++
T Consensus 43 ~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 43 GGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLL 122 (542)
T ss_pred CCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEE
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCC-----CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 101 ITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 101 i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
+++.+....+..... ..++....... . .....+ ...++... . .........++++++++|||||||
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~-~~~~~~~~-~--~~~~~~~~~~~~~a~il~TSGTTG 193 (542)
T PRK06155 123 VVEAALLAALEAADPGDLPLPAVWLLDAPAS-V----SVPAGW-STAPLPPL-D--APAPAAAVQPGDTAAILYTSGTTG 193 (542)
T ss_pred EEChhhHHHHHHhcccccCcceEEEecCccc-c----cccccc-chhhhccc-C--CCCCCCCCCCCCeEEEEECCCCCC
Confidence 999887766554432 11222111100 0 000000 00001000 0 111123346789999999999999
Q ss_pred CcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccce
Q 014435 176 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVT 255 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 255 (424)
.||+|.++|+++............. ..++++++.+|++|..++. .++.++..|+++++.+.+++..+++.|+++++|
T Consensus 194 ~PK~V~~t~~~~~~~~~~~~~~~~~--~~~~~~l~~~pl~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t 270 (542)
T PRK06155 194 PSKGVCCPHAQFYWWGRNSAEDLEI--GADDVLYTTLPLFHTNALN-AFFQALLAGATYVLEPRFSASGFWPAVRRHGAT 270 (542)
T ss_pred CCcEEEEEHHHHHHHHHHHHHhcCC--CCCCEEEEecCHHHHHHHH-HHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCc
Confidence 9999999999998765554444444 3448999999999999995 678999999999999989999999999999999
Q ss_pred EEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCc
Q 014435 256 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGS 335 (424)
Q Consensus 256 ~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 335 (424)
+++++|+++..|.+.........+++|.++.|| .++.+.+.+++.+ ++++++.||+||++.++..... ....++
T Consensus 271 ~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~---~~~~~~ 344 (542)
T PRK06155 271 VTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTETNFVIAVTHG---SQRPGS 344 (542)
T ss_pred EEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecccccCccccCCCC---CCCCCC
Confidence 999999999999887665555677899887666 5688999999988 6899999999999876654322 346678
Q ss_pred cccccCCcEEEEeeCCCCccCCCCCceeEEEecC---Ccchhh------------hhccccCceEEEecCCce-------
Q 014435 336 AGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP---NVTPVF------------ELTVNCNLFSYFRSNDHN------- 393 (424)
Q Consensus 336 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gy------------~~~~~TgD~g~~~~~g~~------- 393 (424)
+|.+.++++++|+| +++++++.|+.|||+++|+ .++.|| ++||+|||+|+++++|.+
T Consensus 345 vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~dG~l~i~GR~~ 423 (542)
T PRK06155 345 MGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDADGWFRFVDRIK 423 (542)
T ss_pred cCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcCCceEEEEecCC
Confidence 99999999999999 6799999999999999998 588898 479999999999999876
Q ss_pred e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++++|++|+|.+||++|.+||+|.+|+|+|
T Consensus 424 d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~ 455 (542)
T PRK06155 424 DAIRRRGENISSFEVEQVLLSHPAVAAAAVFP 455 (542)
T ss_pred CEEEeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 3 889999999999999999999999999974
No 50
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=6.4e-54 Score=418.44 Aligned_cols=383 Identities=27% Similarity=0.385 Sum_probs=318.4
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+.+||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.+++++++
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCCC---eEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcc
Q 014435 102 TVPELWDKVKDLNLP---AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSK 178 (424)
Q Consensus 102 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 178 (424)
+++.....+...... ..+...+.. ....+.+...... .........++++++++|||||||.||
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~PK 172 (504)
T PRK07514 106 CDPANFAWLSKIAAAAGAPHVETLDAD-----------GTGSLLEAAAAAP--DDFETVPRGADDLAAILYTSGTTGRSK 172 (504)
T ss_pred EccchhHHHHHhhhccCCceEEEecCC-----------CcccHHHhhhhcC--cccCcccCCCCCeEEEEECCCCCCCCc
Confidence 998776655443211 001111100 0001111111111 122233456789999999999999999
Q ss_pred hhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEE
Q 014435 179 GVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 179 ~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~ 258 (424)
+|.++|+++............. ..++++++.+|++|..|+....+.++..|+++++.+..++..+++.+. ++|.+.
T Consensus 173 ~v~~s~~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~ 248 (504)
T PRK07514 173 GAMLSHGNLLSNALTLVDYWRF--TPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFDPDAVLALMP--RATVMM 248 (504)
T ss_pred EEEEecHHHHHHHHHHHHHhCC--CCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCCHHHHHHHHH--hheeee
Confidence 9999999999886655544444 334899999999999998777889999999999998899999999994 799999
Q ss_pred echHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcccc
Q 014435 259 VVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGT 338 (424)
Q Consensus 259 ~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~ 338 (424)
++|.++..++.........++++|.+++||+++++++.+.|.+.+ +.++++.||+||++....... ......+++|.
T Consensus 249 ~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~--~~~~~~~~~G~ 325 (504)
T PRK07514 249 GVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMNTSNPY--DGERRAGTVGF 325 (504)
T ss_pred cHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeecccccccccccCCc--cccccCccccc
Confidence 999999999887665666788999999999999999999999988 689999999999875443322 12345678999
Q ss_pred ccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e-eEe
Q 014435 339 LVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D-FFC 397 (424)
Q Consensus 339 ~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d-i~~ 397 (424)
|+++++++|+|++++++++.|+.|||+++|+.++.|| ++||+|||+++++++|.+ | ++.
T Consensus 326 ~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~ 405 (504)
T PRK07514 326 PLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIIS 405 (504)
T ss_pred CCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEe
Confidence 9999999999988999999999999999999999999 468999999999999876 3 899
Q ss_pred eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 398 KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 398 ~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|++|+|.+||+++.++|+|.+++|+|
T Consensus 406 ~G~~i~~~~IE~~l~~~~~v~~~~v~~ 432 (504)
T PRK07514 406 GGYNVYPKEVEGEIDELPGVVESAVIG 432 (504)
T ss_pred CCeEECHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999999999999999999874
No 51
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=4.9e-54 Score=428.64 Aligned_cols=393 Identities=18% Similarity=0.205 Sum_probs=300.1
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+++||+||.+++.++|+.|+++|+++||+|++++||++++++++|||+++|++++|+++.++.+++..++++++++++|+
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~ 192 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFT 192 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccch---------HHHhc----CC-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEe
Q 014435 103 VPELW---------DKVKD----LN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALL 168 (424)
Q Consensus 103 ~~~~~---------~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 168 (424)
++... ..+.. +. .+.+++......... ..........++++...... ..........+++++|+
T Consensus 193 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~il 270 (652)
T TIGR01217 193 VDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRET-EAPKIDGALDLEDFTAAAQA-AELVFEQLPFDHPLWIL 270 (652)
T ss_pred ccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccc-ccccccCcccHHHHHhcccC-CCCCceecCCCCCEEEE
Confidence 87542 22211 11 112222111000000 00001122345555433211 11122334568999999
Q ss_pred cCCCCCCCcchhhhcHHHHHHH-HHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CCHH
Q 014435 169 YSSGTTGVSKGVILTHKNFIAA-SLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIE 243 (424)
Q Consensus 169 ~TSGtTG~pK~v~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~ 243 (424)
|||||||.||+|+++|++++.. .......... ..++++++..|+.|..+. .++.+|..|+++++.+. .++.
T Consensus 271 yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~--~~~~~l~~G~t~vl~~g~~~~~~~~ 346 (652)
T TIGR01217 271 FSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDL--GPGDRLFYYTTTGWMMWN--WLVSGLATGATLVLYDGSPGFPATN 346 (652)
T ss_pred EcCCCCCCCCeEEecccHHHHHHHHHHHhccCC--CCCcEEEEeCCcchhhhH--HHHHHHhcCcEEEEECCCCCCCCch
Confidence 9999999999999999986543 2222222333 334899999999997543 35588999999998752 3788
Q ss_pred HHHHHHHHccceEEEechHHHHHHHhccc--cccCCCCCeeEEEecCCCCCHHHHHHHHHhCC-CCeEEecccCccCCCc
Q 014435 244 MALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIP-GATIFQGYGMTETCAP 320 (424)
Q Consensus 244 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~ 320 (424)
.+++.++++++|++..+|.+++.+.+... ....++++||.+++||+++++++.+++.+.++ +..+.+.||+||+++.
T Consensus 347 ~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~ 426 (652)
T TIGR01217 347 VLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSC 426 (652)
T ss_pred HHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhcc
Confidence 99999999999999888887777655321 23457899999999999999999999998874 3567789999997543
Q ss_pred eeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecC--Ccchhh-----------------hhcccc
Q 014435 321 ISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP--NVTPVF-----------------ELTVNC 381 (424)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gy-----------------~~~~~T 381 (424)
.....+. .....+++|.|.+|++++|+| ++|+++ .|+.|||+++|+ .++.|| ++||+|
T Consensus 427 ~~~~~~~-~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~t 503 (652)
T TIGR01217 427 FAGANPT-LPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRH 503 (652)
T ss_pred ccCCCCC-CCCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEc
Confidence 3322221 134567889999999999999 688888 599999999997 466666 256899
Q ss_pred CceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 382 NLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 382 gD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
||+|++++||.+ | |+++|++|+|.|||++|.+||+|.||+|+|
T Consensus 504 GDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavvg 554 (652)
T TIGR01217 504 GDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCIG 554 (652)
T ss_pred CCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEEe
Confidence 999999999988 3 999999999999999999999999999986
No 52
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.3e-53 Score=421.18 Aligned_cols=392 Identities=25% Similarity=0.364 Sum_probs=320.0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|++|..+.+++..+++.+++++++
T Consensus 41 ~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 120 (559)
T PRK08315 41 GLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALI 120 (559)
T ss_pred CeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEE
Confidence 44699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchH-----HHhcCCCC------------------eEEEecCCCccccccccCCCcccchhhhhhccCCC----CCC
Q 014435 102 TVPELWD-----KVKDLNLP------------------AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV----TDI 154 (424)
Q Consensus 102 ~~~~~~~-----~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 154 (424)
++++... .+...... .++.... ........++++....... ...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (559)
T PRK08315 121 AADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGD---------EKHPGMLNFDELLALGRAVDDAELAA 191 (559)
T ss_pred EeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecc---------cCCcccccHHHHHhhccccccccccc
Confidence 9875421 11111000 0110000 0111223334333221100 011
Q ss_pred CCCCCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceE
Q 014435 155 PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCV 234 (424)
Q Consensus 155 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~ 234 (424)
......++++++++|||||||.||+|.++|+++...+........+.. .++++...|++|.+|+...++.++..|+++
T Consensus 192 ~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~ 269 (559)
T PRK08315 192 RQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTE--EDRLCIPVPLYHCFGMVLGNLACVTHGATM 269 (559)
T ss_pred hhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCC--CceEEEecCcHHHHHHHHHHHHHHhccceE
Confidence 122345788999999999999999999999999887776655555433 489999999999999987889999999999
Q ss_pred Ee-cCCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEeccc
Q 014435 235 VS-MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYG 313 (424)
Q Consensus 235 ~~-~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG 313 (424)
++ ...+++..+++.++++++|+++++|+++..++.........++++|.+++||++++.++.+.+.+.++..++++.||
T Consensus 270 ~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG 349 (559)
T PRK08315 270 VYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYG 349 (559)
T ss_pred EEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEc
Confidence 84 45689999999999999999999999999988876656667899999999999999999999999986667999999
Q ss_pred CccCCCceeecCCCC-CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhcc
Q 014435 314 MTETCAPISLENPLV-GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTV 379 (424)
Q Consensus 314 ~tE~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~ 379 (424)
+||++.+++...... ...+..++|+|+++++++|+|+++++.++.|+.|||+++|+.++.|| ++||
T Consensus 350 ~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~ 429 (559)
T PRK08315 350 MTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWM 429 (559)
T ss_pred ccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCE
Confidence 999887665433221 13456789999999999999976699999999999999999999998 5589
Q ss_pred ccCceEEEecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 380 NCNLFSYFRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 380 ~TgD~g~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|||+|+++++|.+ | ++.+|++|+|.+||++|.++|+|.+++|++
T Consensus 430 ~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 482 (559)
T PRK08315 430 HTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVG 482 (559)
T ss_pred EccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEe
Confidence 99999999999876 3 889999999999999999999999999874
No 53
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-53 Score=418.50 Aligned_cols=392 Identities=31% Similarity=0.448 Sum_probs=327.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+.+||+||+++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++++++.++.+++..+++.++++++
T Consensus 28 ~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i 107 (521)
T PRK06187 28 DGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVV 107 (521)
T ss_pred CCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEE
Confidence 34459999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCC-----CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 101 ITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 101 i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
+++.+....+..+.. ..++........ ........+.+++.... .........++++++++|||||||
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG 180 (521)
T PRK06187 108 LVDSEFVPLLAAILPQLPTVRTVIVEGDGPAA-----PLAPEVGEYEELLAAAS--DTFDFPDIDENDAAAMLYTSGTTG 180 (521)
T ss_pred EEcchHHHHHHHHhhccCCccEEEEecCcccc-----ccccccccHHHHhhcCC--ccCCCCCCCccceEEEEECCCCCC
Confidence 999887766555422 122222221100 11123344555554333 222233456788999999999999
Q ss_pred CcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccce
Q 014435 176 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVT 255 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 255 (424)
.||+|.++|+++............. ..+++++..+|++|.+++. ..+.++..|+++++++.+++..+++.++++++|
T Consensus 181 ~PK~v~~t~~~l~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t 257 (521)
T PRK06187 181 HPKGVVLSHRNLFLHSLAVCAWLKL--SRDDVYLVIVPMFHVHAWG-LPYLALMAGAKQVIPRRFDPENLLDLIETERVT 257 (521)
T ss_pred CCceEEeehHHHHHHHHHHHHhhCC--CCCCEEEEeCCchHHhhHH-HHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCe
Confidence 9999999999988877766554444 3448999999999999986 444499999999999888999999999999999
Q ss_pred EEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC----cc
Q 014435 256 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG----VR 331 (424)
Q Consensus 256 ~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~----~~ 331 (424)
+++++|+++..|.+.......+++++|.+++||+++++++.+.+.+.+ ++++++.||+||+++++........ ..
T Consensus 258 ~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~ 336 (521)
T PRK06187 258 FFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGYGMTETSPVVSVLPPEDQLPGQWT 336 (521)
T ss_pred EEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-CcchheeeccCccCcccccCCcccccccccc
Confidence 999999999999988776667789999999999999999999999998 7999999999999876665443321 12
Q ss_pred CCCccccccCCcEEEEeeCCCCccCCC--CCceeEEEecCCcchhh------------hhccccCceEEEecCCce----
Q 014435 332 RSGSAGTLVAGVEAQIVSVDTLKPLPP--NQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN---- 393 (424)
Q Consensus 332 ~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~---- 393 (424)
..+++|+|.++++++|+| +++.+++. |+.|||+++|+.+..+| ++||+|||+++++++|.+
T Consensus 337 ~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~~g~~~~~G 415 (521)
T PRK06187 337 KRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDEDGYLYITD 415 (521)
T ss_pred cCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcCCCCEEEee
Confidence 567899999999999999 57888888 99999999999999999 458999999999999876
Q ss_pred ---e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ---D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ---d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|.+++|.+||+.|.++|+|.+++|++
T Consensus 416 R~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 450 (521)
T PRK06187 416 RIKDVIISGGENIYPRELEDALYGHPAVAEVAVIG 450 (521)
T ss_pred cccceEEcCCeEECHHHHHHHHHhCCCceEEEEEe
Confidence 3 889999999999999999999999999874
No 54
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-53 Score=414.05 Aligned_cols=379 Identities=28% Similarity=0.367 Sum_probs=314.3
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. ..+.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|+++..+.+++..++
T Consensus 16 p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~ 95 (483)
T PRK03640 16 PDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVLLNTRLSREELLWQL 95 (483)
T ss_pred CCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEecCcCCCHHHHHHHH
Confidence 3333433 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+.++++.++++++.......... ..++++...... .........++++++++||||
T Consensus 96 ~~~~~~~vi~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSG 151 (483)
T PRK03640 96 DDAEVKCLITDDDFEAKLIPGIS-----------------------VKFAELMNGPKE-EAEIQEEFDLDEVATIMYTSG 151 (483)
T ss_pred HhCCCCEEEEcchhhHHHhhhcc-----------------------ccHHHHhhcccc-cCCCCCCCCCCCeEEEEeCCC
Confidence 99999999998765544332110 012222211111 111222345789999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHc
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKY 252 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~ 252 (424)
|||.||+|.++|.++...+......... ..++++++.+|++|.+++. .++.++..|+++++.+..++..+++.++++
T Consensus 152 tTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~ 228 (483)
T PRK03640 152 TTGKPKGVIQTYGNHWWSAVGSALNLGL--TEDDCWLAAVPIFHISGLS-ILMRSVIYGMRVVLVEKFDAEKINKLLQTG 228 (483)
T ss_pred cCCCCcEEEEecHHHHHHHHHHHHhcCC--CcCcEEEEecCHHHHHHHH-HHHHHHhcCCEEEecCCCCHHHHHHHHHHh
Confidence 9999999999999988766555444333 3459999999999999985 678889999999999999999999999999
Q ss_pred cceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccC
Q 014435 253 RVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRR 332 (424)
Q Consensus 253 ~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~ 332 (424)
++|++.++|+++..|.+..... ....++|.+++||+++++.+.+.+++. ++++++.||+||++..++...+......
T Consensus 229 ~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 305 (483)
T PRK03640 229 GVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDALTK 305 (483)
T ss_pred CCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCccccccc
Confidence 9999999999999998664332 234689999999999999999998875 7999999999998765444343333456
Q ss_pred CCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-------
Q 014435 333 SGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN------- 393 (424)
Q Consensus 333 ~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~------- 393 (424)
.+++|+|+++++++|.++ +++++.|+.|||+++|+.++.|| ++||+|||+++++++|.+
T Consensus 306 ~~~vG~p~~~~~~~i~~~--~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~~g~l~~~GR~~ 383 (483)
T PRK03640 306 LGSAGKPLFPCELKIEKD--GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDEEGFLYVLDRRS 383 (483)
T ss_pred CCCcccccCCcEEEEecC--CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcCCCCEEEeeccc
Confidence 689999999999999983 47899999999999999999999 568999999999999976
Q ss_pred e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||+.+.++|.|.+++|++
T Consensus 384 ~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~ 415 (483)
T PRK03640 384 DLIISGGENIYPAEIEEVLLSHPGVAEAGVVG 415 (483)
T ss_pred CeEEeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 3 899999999999999999999999999874
No 55
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-53 Score=418.06 Aligned_cols=389 Identities=21% Similarity=0.310 Sum_probs=307.9
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.++++++|+
T Consensus 42 ~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 42 IAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcCCC---CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcch
Q 014435 103 VPELWDKVKDLNL---PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKG 179 (424)
Q Consensus 103 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 179 (424)
+............ ...+....... ......... ..................++.++++|||||||.||+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKg 193 (534)
T PRK05852 122 DADGPHDRAEPTTRWWPLTVNVGGDSG-------PSGGTLSVH-LDAATEPTPATSTPEGLRPDDAMIMFTGGTTGLPKM 193 (534)
T ss_pred cCCCcchhccccccccceeeeeccccc-------ccccccccc-cccccCCCccccccCCCCCCceEEEeCCCCCCCCcE
Confidence 8653322111100 00111100000 000000000 000000000111112235778999999999999999
Q ss_pred hhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC--CCCHHHHHHHHHHccceEE
Q 014435 180 VILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG--KFDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 180 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~ 257 (424)
|.++|+++...+......... ..++++++..|++|.+++...++.++..|++++++. .+++..+++.++++++|++
T Consensus 194 v~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 271 (534)
T PRK05852 194 VPWTHANIASSVRAIITGYRL--SPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWY 271 (534)
T ss_pred EEecHHHHHHHHHHHHHHhCC--CCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEE
Confidence 999999998887776655544 344899999999999999878899999999998864 4789999999999999999
Q ss_pred EechHHHHHHHhccccc--cCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC------C
Q 014435 258 WVVPPIILALAKNSLVR--KFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV------G 329 (424)
Q Consensus 258 ~~~p~~~~~l~~~~~~~--~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~------~ 329 (424)
+++|.++..|.+..... ..+.+++|.+.++|+++++++++.+.+.+ +.++++.||+||++..++...... .
T Consensus 272 ~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~ 350 (534)
T PRK05852 272 TAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFGMTEATHQVTTTQIEGIGQTENP 350 (534)
T ss_pred EcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccCccccchhhhcCCccccccccCc
Confidence 99999999998765432 23468999999999999999999999988 689999999999987655432210 0
Q ss_pred ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce----
Q 014435 330 VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN---- 393 (424)
Q Consensus 330 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~---- 393 (424)
....+..|. .++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|++++||.+
T Consensus 351 ~~~~g~~g~-~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~dG~l~~~g 428 (534)
T PRK05852 351 VVSTGLVGR-STGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSAAGDLSIRG 428 (534)
T ss_pred ccccccCCC-CCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeCCCcEEEEe
Confidence 112233444 6899999999 6789999999999999999999999 469999999999999987
Q ss_pred ---e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ---D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ---d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|.+|+|.+||++|.++|+|.+|+|+|
T Consensus 429 R~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g 463 (534)
T PRK05852 429 RIKELINRGGEKISPERVEGVLASHPNVMEAAVFG 463 (534)
T ss_pred cchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 3 889999999999999999999999999986
No 56
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-53 Score=419.23 Aligned_cols=392 Identities=23% Similarity=0.343 Sum_probs=318.1
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++++++++.++.+++..+++++++++++
T Consensus 43 ~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 122 (558)
T PRK12583 43 ALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVI 122 (558)
T ss_pred CcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecccch-----HHHhcCCCC-----------------eEEEecCCCccccccccCCCcccchhhhhhccCCC----CCCC
Q 014435 102 TVPELW-----DKVKDLNLP-----------------AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV----TDIP 155 (424)
Q Consensus 102 ~~~~~~-----~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 155 (424)
+++... ..+...... ...+.... ........+++........ ....
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (558)
T PRK12583 123 CADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAP--------APPPGFLAWHELQARGETVSREALAER 194 (558)
T ss_pred EeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecC--------CCCccccchHhhhhccccccccccccc
Confidence 986432 111111000 00000000 0011222333332221110 0111
Q ss_pred CCCCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEE
Q 014435 156 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 235 (424)
Q Consensus 156 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~ 235 (424)
.....++++++++|||||||.||+|.++|+++...+.......... .++++++..|++|.+|....++.++..|++++
T Consensus 195 ~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~--~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~ 272 (558)
T PRK12583 195 QASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLT--EHDRLCVPVPLYHCFGMVLANLGCMTVGACLV 272 (558)
T ss_pred ccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCC--CCCeEEEecCchhhhhHHHHHHHHHhcCceEE
Confidence 2234578899999999999999999999999988776655554443 34899999999999999888889999999998
Q ss_pred ec-CCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccC
Q 014435 236 SM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGM 314 (424)
Q Consensus 236 ~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~ 314 (424)
++ ..+++..+++.++++++|++.++|+++..+.........+++++|.+++||+++++++.+++.+.+++..+++.||+
T Consensus 273 ~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~ 352 (558)
T PRK12583 273 YPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGM 352 (558)
T ss_pred eecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccc
Confidence 65 35789999999999999999999999988887665555678999999999999999999999999877789999999
Q ss_pred ccCCCceeecCCC-CCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccc
Q 014435 315 TETCAPISLENPL-VGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVN 380 (424)
Q Consensus 315 tE~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~ 380 (424)
||+++++...... ....+..++|+|.+++.++|+|+ ++++++.|+.|||+++|+.++.|| ++||+
T Consensus 353 tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~ 431 (558)
T PRK12583 353 TETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDP-DGATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMH 431 (558)
T ss_pred cccccceeccCcccccccccCCCCccCCCCeEEEECC-CCCCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCee
Confidence 9998776654322 11345678999999999999996 489999999999999999999998 45899
Q ss_pred cCceEEEecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 381 CNLFSYFRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 381 TgD~g~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|||+|+++++|.+ | ++++|++|+|.+||++|.++|.|.+++|+|
T Consensus 432 TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 483 (558)
T PRK12583 432 TGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFG 483 (558)
T ss_pred ccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999877 3 889999999999999999999999999975
No 57
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-54 Score=420.57 Aligned_cols=384 Identities=19% Similarity=0.284 Sum_probs=300.1
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++|+++.++.+++.++++.+++++++
T Consensus 39 ~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 39 TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCC-----CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
+++........+. ...+.+... .. .. ......... .........++++++++|||||||.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~--~~~~~~~~~---~~~~~~~~~~~~~a~i~~TSGTTG~ 183 (540)
T PRK05857 119 VAPGSKMASSAVPEALHSIPVIAVDIA-AV---------TR--ESEHSLDAA---SLAGNADQGSEDPLAMIFTSGTTGE 183 (540)
T ss_pred EeccchhccccccccccccceeEeecc-cc---------cc--ccccccccc---ccccccCCCCCCeEEEEeCCCCCCC
Confidence 9986543221111 011111100 00 00 000000000 0111223467899999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhh--hhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccc
Q 014435 177 SKGVILTHKNFIAASLMISAH--QELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRV 254 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~ 254 (424)
||+|.++|+++.+........ .......+++.+..+|++|..++. ..+.++..|+++++. +.++..+++.++++++
T Consensus 184 PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l~~G~~~v~~-~~~~~~~~~~i~~~~i 261 (540)
T PRK05857 184 PKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCLMHGGLCVTG-GENTTSLLEILTTNAV 261 (540)
T ss_pred CCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHhhcceeEEec-CCChhHHHHHHHhcCc
Confidence 999999999987764432211 001112347889999999999986 667788889888764 5688999999999999
Q ss_pred eEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC---cc
Q 014435 255 TVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG---VR 331 (424)
Q Consensus 255 t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~---~~ 331 (424)
|+++++|+++..+.+.......+++++|.+++||++++....+ +.+.+ ++++++.||+||++........... ..
T Consensus 262 t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~ 339 (540)
T PRK05857 262 ATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGCTALCLPTDDGSIVKI 339 (540)
T ss_pred ceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCceeeeccccccccccc
Confidence 9999999999999887665566789999999999999887775 44566 6999999999998754433222111 22
Q ss_pred CCCccccccCCcEEEEeeCCCCccC-----CCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-
Q 014435 332 RSGSAGTLVAGVEAQIVSVDTLKPL-----PPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN- 393 (424)
Q Consensus 332 ~~~~~G~~~~~~~~~i~d~~~~~~~-----~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~- 393 (424)
+.+++|+|++|++++|+|++...++ +.|+.|||+++|+.++.|| ++||+|||+|+++++|++
T Consensus 340 ~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~~g~l~ 419 (540)
T PRK05857 340 EAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERREDGFFY 419 (540)
T ss_pred ccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcCCceEE
Confidence 4578999999999999995333333 4578999999999999999 569999999999999977
Q ss_pred ------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.|||.+|..||.|.+|+|+|
T Consensus 420 ~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~ 457 (540)
T PRK05857 420 IKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYE 457 (540)
T ss_pred EeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 3 999999999999999999999999999985
No 58
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.3e-54 Score=427.05 Aligned_cols=383 Identities=23% Similarity=0.282 Sum_probs=294.8
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCH-----HHHHHHHHhcCC
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTV-----SELSKQVKDSNP 97 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~-----~~i~~~l~~~~~ 97 (424)
+.+||+||.++++++|++|++.|+++||+|+++++|+++|+++++||+++|++++|++|.++. +++.++++.+++
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~ 158 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKP 158 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCC
Confidence 579999999999999999999999999999999999999999999999999999999999875 899999999999
Q ss_pred eEEEEcccc--hHHHhcC---CCCeEEEecCCCccccccccCCCcccchhhhhhccCCCC-CCCCCCCCCCCEEEEecCC
Q 014435 98 KLVITVPEL--WDKVKDL---NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT-DIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 98 ~~ii~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TS 171 (424)
+++|+++.. ...+... ....+..... ........++++........ ........++++++++|||
T Consensus 159 ~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTS 229 (624)
T PRK12582 159 RVVFAQSGAPFARALAALDLLDVTVVHVTGP---------GEGIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTS 229 (624)
T ss_pred cEEEecCHHHHHHHHHhhhhcCceEEEEcCC---------CcccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcC
Confidence 999998642 1111111 1112211110 00111233444433211100 0011234578999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccC-CCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CC---HHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FD---IEMAL 246 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~---~~~~~ 246 (424)
||||.||+|.++|+++................ ..++.+.++|++|.+|+...++.++..|+++++.+. ++ ...++
T Consensus 230 GTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~ 309 (624)
T PRK12582 230 GSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETI 309 (624)
T ss_pred CCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHH
Confidence 99999999999999998776554333222221 247899999999999987677888999999998753 33 34567
Q ss_pred HHHHHccceEEEechHHHHHHHhcccc----ccCCCCCeeEEEecCCCCCHHHHHHHHHhC----C-CCeEEecccCccC
Q 014435 247 RAIEKYRVTVWWVVPPIILALAKNSLV----RKFDISSLKLVGSGAAPLGKELMEDCQKNI----P-GATIFQGYGMTET 317 (424)
Q Consensus 247 ~~i~~~~~t~~~~~p~~~~~l~~~~~~----~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~----~-~~~~~~~yG~tE~ 317 (424)
+.++++++|+++++|.++..|.+.... ....+++||.+++||+++++++.+++++.+ + ++.+++.||+||+
T Consensus 310 ~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~ 389 (624)
T PRK12582 310 RNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATET 389 (624)
T ss_pred HHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccc
Confidence 788899999999999999988764321 223468999999999999999999998863 2 3689999999998
Q ss_pred CCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCce
Q 014435 318 CAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLF 384 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~ 384 (424)
++++...... ..+.+++|+|++|++++|++ .|+.|||+++|++++.|| ++||+|||+
T Consensus 390 ~~~~~~~~~~--~~~~~svG~p~pg~~v~i~~--------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDl 459 (624)
T PRK12582 390 APTTTGTHWD--TERVGLIGLPLPGVELKLAP--------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDA 459 (624)
T ss_pred cceeecccCC--CCCCCCCCcCCCCcEEEEcc--------CCCceEEEEECCcccccccCCccchhhhcCccCCccccce
Confidence 8765533322 35578999999999999964 478899999999999999 579999999
Q ss_pred EEE-e---cCCce-------e-eE-eeeeeeChhhHH--HHHhcCCCcccceecC
Q 014435 385 SYF-R---SNDHN-------D-FF-CKLFQVAPAELE--GLLVSHPEILDAVVIP 424 (424)
Q Consensus 385 g~~-~---~~g~~-------d-i~-~~G~~v~~~~iE--~~l~~~p~V~~a~v~g 424 (424)
|++ + ++|.+ | ++ .+|++|+|.+|| .++.+||.|.+|+|+|
T Consensus 460 g~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG 514 (624)
T PRK12582 460 ARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAG 514 (624)
T ss_pred EEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEc
Confidence 998 4 35666 3 66 479999998885 6789999999999987
No 59
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.6e-53 Score=414.33 Aligned_cols=390 Identities=23% Similarity=0.335 Sum_probs=320.5
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.+++.++|++|++.|+++|++|+++++|+++++++++||+++|++++|+++.++.+++..+++.+++++++
T Consensus 23 ~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i 102 (515)
T TIGR03098 23 DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLV 102 (515)
T ss_pred CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCC-----CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++++....+..... ..++......... ........++++...... ........+++++++|||||||.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGTTG~ 175 (515)
T TIGR03098 103 TSSERLDLLHPALPGCHDLRTLILVGEPAHAS----EGGGESPSWPKLLALGDA---DPPHPVIDSDMAAILYTSGSTGR 175 (515)
T ss_pred EccchhhhhHhhhhcccccceEEEecCccccc----CCccccccHHHhhccccc---cccCCCCcCCeEEEEECCCCCCC
Confidence 98876554433221 1122111111000 011122344444432221 12233456889999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
||+|.++|.++...+......... ..++++++.+|++|.+++. .++.++..|+++++.+.+++..+.+.++++++|+
T Consensus 176 PK~v~~t~~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 252 (515)
T TIGR03098 176 PKGVVLSHRNLVAGAQSVATYLEN--RPDDRLLAVLPLSFDYGFN-QLTTAFYVGATVVLHDYLLPRDVLKALEKHGITG 252 (515)
T ss_pred CceEEEecHHHHHHHHHHHHHhCC--CcccEEEEECchhhHhHHH-HHHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCce
Confidence 999999999998877766554443 3448999999999999985 7889999999999998899999999999999999
Q ss_pred EEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcc
Q 014435 257 WWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSA 336 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 336 (424)
+.++|+++..|.+.... ...++++|.++++|+++++.+.+.+++.+++..+++.||+||++...... +.....+.+++
T Consensus 253 ~~~~P~~~~~l~~~~~~-~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~v 330 (515)
T TIGR03098 253 LAAVPPLWAQLAQLDWP-ESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLP-PEEVDRRPDSI 330 (515)
T ss_pred EecChHHHHHHHhcccC-CCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecc-cccccCCCCCc
Confidence 99999999999875332 23578999999999999999999999999889999999999987654432 22224567899
Q ss_pred ccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhhh------------------------hccccCceEEEecCCc
Q 014435 337 GTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFE------------------------LTVNCNLFSYFRSNDH 392 (424)
Q Consensus 337 G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~------------------------~~~~TgD~g~~~~~g~ 392 (424)
|+|+++++++|+| ++++.++.|+.|||+++|+.++.||- .||+|||+|+++++|.
T Consensus 331 G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 409 (515)
T TIGR03098 331 GKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGF 409 (515)
T ss_pred ceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCce
Confidence 9999999999999 68899999999999999999999980 1689999999999987
Q ss_pred e-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 393 N-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 393 ~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+ | ++.+|++|+|.+||++|.+||.|.+|+|+|
T Consensus 410 l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 449 (515)
T TIGR03098 410 LYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFG 449 (515)
T ss_pred EEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEe
Confidence 7 3 889999999999999999999999999985
No 60
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.1e-53 Score=431.38 Aligned_cols=379 Identities=21% Similarity=0.277 Sum_probs=302.6
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++++++++++
T Consensus 229 ~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi 307 (718)
T PRK08043 229 FTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIF 307 (718)
T ss_pred CCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEE
Confidence 36799999999999999999987 59999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhc--CCC---C-eEEEecCCCccccccccCCCcccchhh--hhhccCCCCCCCCCCCCCCCEEEEecCCCC
Q 014435 102 TVPELWDKVKD--LNL---P-AVLLGSKDKVSSSGLISRSSKIVSFHD--LIELSGSVTDIPDVSVKQTDAAALLYSSGT 173 (424)
Q Consensus 102 ~~~~~~~~~~~--~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 173 (424)
++.+....... ... . ..+.... . . ....+.. .................++|+++++|||||
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGT 376 (718)
T PRK08043 308 TSRQFLDKGKLWHLPEQLTQVRWVYLED-L-------K---DDVTTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGS 376 (718)
T ss_pred EcHHHHhhccCCChhhhhccccEEEhhh-h-------h---hhcchhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCC
Confidence 98775442111 110 0 1111110 0 0 0000100 000000000111123457899999999999
Q ss_pred CCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHc
Q 014435 174 TGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKY 252 (424)
Q Consensus 174 TG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~ 252 (424)
||.||+|.++|+++...+......... ..++++++.+|++|.+++...++.++..|+++++.+. +++..+.+.++++
T Consensus 377 TG~PKgv~~sh~~l~~~~~~~~~~~~~--~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~ 454 (718)
T PRK08043 377 EGHPKGVVHSHKSLLANVEQIKTIADF--TPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDR 454 (718)
T ss_pred CCCCCEEEEcHHHHHHHHHHHHHhhCC--CccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhc
Confidence 999999999999998877665544433 3448999999999999997778899999999998764 5778888999999
Q ss_pred cceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccC
Q 014435 253 RVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRR 332 (424)
Q Consensus 253 ~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~ 332 (424)
++|+++++|+++..+.+.. ...++++||.+++||+++++++.+.|++.+ ++++++.||+||+++.++...+. ..+
T Consensus 455 ~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~--~~~ 529 (718)
T PRK08043 455 NCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYGVTECAPVVSINVPM--AAK 529 (718)
T ss_pred CCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccCcccccceEEecCCc--ccC
Confidence 9999999999998876542 234678999999999999999999999988 69999999999998766654433 345
Q ss_pred CCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh----------------------hhccccCceEEEecC
Q 014435 333 SGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF----------------------ELTVNCNLFSYFRSN 390 (424)
Q Consensus 333 ~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy----------------------~~~~~TgD~g~~~~~ 390 (424)
.+++|+|+|+++++|+|. ++ .++.|||+++|++++.|| ++||+|||+|++++|
T Consensus 530 ~~svG~p~pg~~~~i~d~-~~----~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~d 604 (718)
T PRK08043 530 PGTVGRILPGMDARLLSV-PG----IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQ 604 (718)
T ss_pred CCCCCCcCCCCeeEEecC-CC----CCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCC
Confidence 789999999999999984 43 256699999999999888 158999999999999
Q ss_pred Cce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 391 DHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 391 g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|++ | ++++|++|+|.|||+++.+|+.+.+++|++
T Consensus 605 G~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~ 646 (718)
T PRK08043 605 GFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAI 646 (718)
T ss_pred CcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEE
Confidence 987 3 999999999999999999999888887764
No 61
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-53 Score=415.80 Aligned_cols=375 Identities=19% Similarity=0.262 Sum_probs=306.0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+.+||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++.+++++++
T Consensus 58 ~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 137 (516)
T PRK13383 58 DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVV 137 (516)
T ss_pred CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEE
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhh
Q 014435 102 TVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVI 181 (424)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 181 (424)
++++....+.........+... . .... . . ...+...++.++++|||||||.||+|.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~---~--~--~~~p~~~~~~~~il~TSGTTG~PK~v~ 193 (516)
T PRK13383 138 ADNEFAERIAGADDAVAVIDPA----------------T-AGAE---E--S--GGRPAVAAPGRIVLLTSGTTGKPKGVP 193 (516)
T ss_pred EchhHHHHHHhhhcceEEeccc----------------h-hhhh---c--C--CCCCCCCCCCcEEEECCCCCCCCCeee
Confidence 9987766655433222111100 0 0000 0 0 001112355678999999999999999
Q ss_pred hcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEech
Q 014435 182 LTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVP 261 (424)
Q Consensus 182 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 261 (424)
++|....................+++++..+|++|.+|+. ..+.++..|+++++...+++..+++.++++++|.+.++|
T Consensus 194 ~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 272 (516)
T PRK13383 194 RAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLG-MLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVP 272 (516)
T ss_pred ecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHH-HHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecH
Confidence 9987432211111111112223448999999999999995 667789999999998889999999999999999999999
Q ss_pred HHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccc
Q 014435 262 PIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTL 339 (424)
Q Consensus 262 ~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~ 339 (424)
.++..+.+.... ....++++|.+++||+++++++.++|.+.+ +..+++.||+||++..+..... ......+++|+|
T Consensus 273 ~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~ 350 (516)
T PRK13383 273 VVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALATPA-DLRDAPETVGKP 350 (516)
T ss_pred HHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhcccccccccceecccc-ccccCCCcccCC
Confidence 999999875432 123578999999999999999999999998 5889999999999865544322 223456789999
Q ss_pred cCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh---------hhccccCceEEEecCCce-------e-eEeeeeee
Q 014435 340 VAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF---------ELTVNCNLFSYFRSNDHN-------D-FFCKLFQV 402 (424)
Q Consensus 340 ~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy---------~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v 402 (424)
+++++++|+| +++++++.|+.|||+++|+.++.+| ++||+|||+|+++++|++ | ++.+|++|
T Consensus 351 ~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v 429 (516)
T PRK13383 351 VAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENV 429 (516)
T ss_pred CCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcCCccEEEeccccceEEECCEEE
Confidence 9999999999 6789999999999999999999999 589999999999999877 3 89999999
Q ss_pred ChhhHHHHHhcCCCcccceecC
Q 014435 403 APAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 403 ~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|.+||.+|.+||.|.+++|++
T Consensus 430 ~~~eiE~~l~~~~~v~~~~vv~ 451 (516)
T PRK13383 430 YPRAVENALAAHPAVADNAVIG 451 (516)
T ss_pred CHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999999999999875
No 62
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-53 Score=413.11 Aligned_cols=377 Identities=19% Similarity=0.241 Sum_probs=307.5
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~-gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
++.+||.||.++++++|++|+++ |++++++|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++
T Consensus 26 ~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 26 DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 45799999999999999999997 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchh
Q 014435 101 ITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGV 180 (424)
Q Consensus 101 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 180 (424)
+++++....+.........+.... ..+.+.+..... .........++++++++|||||||.||+|
T Consensus 106 i~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PKgv 170 (529)
T PRK07867 106 LTESAHAELLDGLDPGVRVINVDS--------------PAWADELAAHRD-AEPPFRVADPDDLFMLIFTSGTSGDPKAV 170 (529)
T ss_pred EECHhHHHHHHhhccCceEEEecc--------------ccHHHHhcccCC-CCCCcccCCccceEEEEECCCCCCCCcEE
Confidence 999887765554321111111110 112332321111 11122334678999999999999999999
Q ss_pred hhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEec
Q 014435 181 ILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVV 260 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 260 (424)
+++|+++.............. ..+++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|++.++
T Consensus 171 ~~s~~~l~~~~~~~~~~~~~~--~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 248 (529)
T PRK07867 171 RCTHRKVASAGVMLAQRFGLG--PDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYV 248 (529)
T ss_pred EecHHHHHHHHHHHHHhhCCC--cccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEecc
Confidence 999999987766655554443 348999999999999997777788999999999988999999999999999999999
Q ss_pred hHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcccccc
Q 014435 261 PPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLV 340 (424)
Q Consensus 261 p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 340 (424)
|+.+..++..........+++|. ++||+.+++.. .++.+.+ +.++++.||+||+++.+... + ....+++|.|.
T Consensus 249 p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~~~~~~-~---~~~~~~~g~~~ 321 (529)
T PRK07867 249 GKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGVAITRT-P---DTPPGALGPLP 321 (529)
T ss_pred HHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeecccccccccccC-C---CCCCCCcCCCC
Confidence 99999888765433323457784 56888887764 6777777 68999999999987654432 2 23456889999
Q ss_pred CCcEEEEeeCCCCccCCCCC------------ceeEEE-ecCCcchhh------------hhccccCceEEEecCCce--
Q 014435 341 AGVEAQIVSVDTLKPLPPNQ------------LGEIWV-RGPNVTPVF------------ELTVNCNLFSYFRSNDHN-- 393 (424)
Q Consensus 341 ~~~~~~i~d~~~~~~~~~g~------------~Gel~v-~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-- 393 (424)
++ ++++|++++++++.|+ .|||++ +|+.++.|| ++||+|||+|+++++|.+
T Consensus 322 ~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~ 399 (529)
T PRK07867 322 PG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDADGYAYF 399 (529)
T ss_pred CC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeCCCcEEE
Confidence 98 7788877888899888 999999 999999999 479999999999999987
Q ss_pred -----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++++|++|+|.+||++|.+||+|.+|+|+|
T Consensus 400 ~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g 436 (529)
T PRK07867 400 AGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYA 436 (529)
T ss_pred eccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEe
Confidence 3 889999999999999999999999999985
No 63
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3.5e-54 Score=421.02 Aligned_cols=376 Identities=15% Similarity=0.195 Sum_probs=290.2
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC-------CCCHHHHHHHHHh
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-------VYTVSELSKQVKD 94 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-------~~~~~~i~~~l~~ 94 (424)
++++||+||.++++++|+.|.++ ++||+|+++++|++++++++|||+++|+++++++. ....+++.++++.
T Consensus 29 ~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 106 (525)
T PRK05851 29 WRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAVSILPGPVRGADDGRWADATLTRFAG 106 (525)
T ss_pred ceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCcCCCCCCCccchhhHHHHHHHHHHh
Confidence 57899999999999999999987 89999999999999999999999999998654431 1223455677899
Q ss_pred cCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCC
Q 014435 95 SNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTT 174 (424)
Q Consensus 95 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 174 (424)
++++++|++++....+........+ . .+...... . ...+.....++++++++||||||
T Consensus 107 ~~~~~vi~~~~~~~~~~~~~~~~~~---~----------------~~~~~~~~-~--~~~~~~~~~~~d~a~i~~TSGTT 164 (525)
T PRK05851 107 IGVRTVLSHGSHLERLRAVDSSVTV---H----------------DLATAAHT-N--RSASLTPPDSGGPAVLQGTAGST 164 (525)
T ss_pred cCCCEEEeCHHHHHHHHHhhccccc---c----------------cccccccc-c--ccccCCCCCCCCeEEEEeCCCCC
Confidence 9999999987765544432111000 0 00000000 0 00011123578999999999999
Q ss_pred CCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC--C--CHHHHHHHHH
Q 014435 175 GVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK--F--DIEMALRAIE 250 (424)
Q Consensus 175 G~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~i~ 250 (424)
|.||+|.++|+++...+.......... ..++++++.+|++|.+|+. .++.++..|+++++.+. + ++..+++.++
T Consensus 165 G~PKgV~~th~~~~~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~ 242 (525)
T PRK05851 165 GTPRTAILSPGAVLSNLRGLNARVGLD-AATDVGCSWLPLYHDMGLA-FLLTAALAGAPLWLAPTTAFSASPFRWLSWLS 242 (525)
T ss_pred CCCcEEEecHHHHHHHHHHHHHHhCCC-CCCCeEEEcCCCccCccHH-HHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHH
Confidence 999999999999998877665554443 1458999999999999995 67889999999998763 3 6788999999
Q ss_pred HccceEEEechHHHHHHHhccc-cccCCCCCeeEEEecCCCCCHHHHHHHHHh---C--CCCeEEecccCccCCCceeec
Q 014435 251 KYRVTVWWVVPPIILALAKNSL-VRKFDISSLKLVGSGAAPLGKELMEDCQKN---I--PGATIFQGYGMTETCAPISLE 324 (424)
Q Consensus 251 ~~~~t~~~~~p~~~~~l~~~~~-~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~---~--~~~~~~~~yG~tE~~~~~~~~ 324 (424)
++++|++..+|.++..+.+... ....+++++|.+++||+++++++.++|.+. + ++..+++.||+||++..++..
T Consensus 243 ~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~ 322 (525)
T PRK05851 243 DSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVP 322 (525)
T ss_pred HhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEec
Confidence 9999988665555555443221 233457899999999999999999998874 2 124699999999987665543
Q ss_pred CCCC-------------CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--------hhccccCc
Q 014435 325 NPLV-------------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF--------ELTVNCNL 383 (424)
Q Consensus 325 ~~~~-------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy--------~~~~~TgD 383 (424)
.+.. ...+.+++|+|++|++++|+|++.+.+++.|+.|||+++|+.++.|| ++||+|||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGD 402 (525)
T PRK05851 323 VPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGD 402 (525)
T ss_pred CCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCCccCCCCceeccc
Confidence 2210 01234689999999999999965556789999999999999999999 57999999
Q ss_pred eEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 384 FSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 384 ~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|+++ +|.+ | |+++|++|+|.|||++|.+||+|.+|+|++
T Consensus 403 l~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~ 450 (525)
T PRK05851 403 LGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVA 450 (525)
T ss_pred eEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEE
Confidence 99987 6766 3 999999999999999999999999999874
No 64
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.6e-53 Score=453.78 Aligned_cols=401 Identities=24% Similarity=0.309 Sum_probs=322.9
Q ss_pred cCCCCCCC--CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 14 SLRPPLVL--PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 14 ~~~~~~~~--~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
++++++.. ++++||+||.++++++|+.|++ ++++||+|+++++|+++++++++||+++|++++|+++..+.+++.++
T Consensus 629 p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~~~~~ 707 (1146)
T PRK08633 629 WSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGKVPVNLNYTASEAALKSA 707 (1146)
T ss_pred CCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeCCCcCHHHHHHH
Confidence 44555432 4689999999999999999987 58999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEcccchHHHhcCC------CCeEEEecCCCccccccccCCCcccchhhhhhccCCCC----CCCCCCCCC
Q 014435 92 VKDSNPKLVITVPELWDKVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT----DIPDVSVKQ 161 (424)
Q Consensus 92 l~~~~~~~ii~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 161 (424)
++++++++++++++....+.... ....++..++.. ........+.+......... ........+
T Consensus 708 l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1146)
T PRK08633 708 IEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLK------AKISKVDKLTALLAARLLPARLLKRLYGPTFKP 781 (1146)
T ss_pred HHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhc------cccchhHHHHHHHHhccCCHHHHHhhccCCCCC
Confidence 99999999999987766654211 111111111100 00001111221111110000 000134567
Q ss_pred CCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CC
Q 014435 162 TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KF 240 (424)
Q Consensus 162 ~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~ 240 (424)
+|+++++|||||||.||+|.++|+++............. ..++++++.+|++|.+|+...++.++..|+++++.+ .+
T Consensus 782 ~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~ 859 (1146)
T PRK08633 782 DDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNL--RNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPT 859 (1146)
T ss_pred CCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCC--CCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCC
Confidence 999999999999999999999999999887766554444 344899999999999999776888999999998865 47
Q ss_pred CHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCc
Q 014435 241 DIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAP 320 (424)
Q Consensus 241 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 320 (424)
++..+++.++++++|++.++|++++.+.++....+.+++++|.+++||+++++++.+++++.+ ++++++.||+||+++.
T Consensus 860 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~ 938 (1146)
T PRK08633 860 DALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GIRILEGYGATETSPV 938 (1146)
T ss_pred CHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCeecccccccCcce
Confidence 999999999999999999999999999887665666789999999999999999999999988 6999999999999877
Q ss_pred eeecCCCC--------CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------h----
Q 014435 321 ISLENPLV--------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------E---- 376 (424)
Q Consensus 321 ~~~~~~~~--------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~---- 376 (424)
++...+.. ...+.+++|+|+|+++++|+|++++++++.|+.|||+++|+.++.|| +
T Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~ 1018 (1146)
T PRK08633 939 ASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGI 1018 (1146)
T ss_pred EEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCC
Confidence 66543321 12356789999999999999988899999999999999999999999 3
Q ss_pred hccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCC--CcccceecC
Q 014435 377 LTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHP--EILDAVVIP 424 (424)
Q Consensus 377 ~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p--~V~~a~v~g 424 (424)
+||+|||+|++++||.+ | ++++|++|+|.|||++|.+|| .+.+|+|++
T Consensus 1019 ~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~ 1076 (1146)
T PRK08633 1019 GWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTA 1076 (1146)
T ss_pred CeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEe
Confidence 89999999999999987 3 899999999999999999999 456677764
No 65
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-53 Score=414.70 Aligned_cols=394 Identities=21% Similarity=0.274 Sum_probs=314.6
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.+++++++
T Consensus 37 ~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 116 (539)
T PRK07008 37 IHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVL 116 (539)
T ss_pred ceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEE
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCC-----CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
+++++.+.+..... ..++...+..... .....+.+++++..... .........++++++++|||||||.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~i~~TSGTTG~ 190 (539)
T PRK07008 117 FDLTFLPLVDALAPQCPNVKGWVAMTDAAHLP----AGSTPLLCYETLVGAQD--GDYDWPRFDENQASSLCYTSGTTGN 190 (539)
T ss_pred EcchhHHHHHHHHhhCCCceEEEEEccCCccc----cCCcccccHHHHhcccC--CCcCcccCCcccceEEEECCCCCCC
Confidence 99877655443211 1112111111000 01122445555543322 1112224457889999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccce
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVT 255 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t 255 (424)
||+|+++|+++.................+++++...|++|.+++. ..+.++..|+++++++ .+++..+.+.++++++|
T Consensus 191 PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt 269 (539)
T PRK07008 191 PKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWG-LPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVT 269 (539)
T ss_pred CcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHH-HHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCE
Confidence 999999999986543222111122233458999999999988774 5567788999999874 57899999999999999
Q ss_pred EEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC------
Q 014435 256 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG------ 329 (424)
Q Consensus 256 ~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~------ 329 (424)
++.++|+++..+++.......+++++|.++++|+++++++.+++.+.+ +..+++.||+||++..++.......
T Consensus 270 ~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~ 348 (539)
T PRK07008 270 FSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVIHAWGMTEMSPLGTLCKLKWKHSQLPL 348 (539)
T ss_pred EEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCceecccccccccccceecccccccccCCc
Confidence 999999999999987766666789999999999999999999999988 6999999999999865543321100
Q ss_pred ---ccCCCccccccCCcEEEEeeCCCCccCCCC--CceeEEEecCCcchhh---------hhccccCceEEEecCCce--
Q 014435 330 ---VRRSGSAGTLVAGVEAQIVSVDTLKPLPPN--QLGEIWVRGPNVTPVF---------ELTVNCNLFSYFRSNDHN-- 393 (424)
Q Consensus 330 ---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy---------~~~~~TgD~g~~~~~g~~-- 393 (424)
.....++|+|+|+++++|+| +++++++.+ +.|||+++|+.++.|| ++||+|||+|++++||.+
T Consensus 349 ~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~dg~l~~ 427 (539)
T PRK07008 349 DEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDADGFMQI 427 (539)
T ss_pred hhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcCCCcEEE
Confidence 11246789999999999999 577777754 5799999999999999 679999999999999976
Q ss_pred -----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||+++.+||.|.+++|+|
T Consensus 428 ~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~ 464 (539)
T PRK07008 428 TDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIA 464 (539)
T ss_pred eecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEe
Confidence 3 899999999999999999999999999885
No 66
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.1e-54 Score=493.68 Aligned_cols=385 Identities=21% Similarity=0.300 Sum_probs=322.9
Q ss_pred ecCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 13 RSLRPPLVL-PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 13 ~~~~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
.++..++.. ++++||+||.++++++|+.|.++|+++|++|+++++|++++++++|||+++|++++|++|.++.+++.++
T Consensus 3108 ~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~i 3187 (3956)
T PRK12467 3108 TPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYM 3187 (3956)
T ss_pred CCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHH
Confidence 355666654 4569999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCC
Q 014435 92 VKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 92 l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 171 (424)
++.++++++|+++.....+........+.. +....... ....+.....++++++++|||
T Consensus 3188 l~~~~~~~vlt~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~-~~~~~~~~~~~~~~a~ii~TS 3246 (3956)
T PRK12467 3188 IEDSGVKLLLTQAHLLEQLPAPAGDTALTL--------------------DRLDLNGY-SENNPSTRVMGENLAYVIYTS 3246 (3956)
T ss_pred HhCCCCcEEEechhhhhhcccccCCceeee--------------------cchhhccc-CCCCCcccCCCCceEEEEEcc
Confidence 999999999998876554432211111111 00000000 122233345689999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC--CCHHHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK--FDIEMALRAI 249 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~i 249 (424)
||||.||||+++|+++.+.+.......... .+++++.++|++|..+.. .++.+|..|+++++.+. +++..+++.|
T Consensus 3247 GSTG~PKgV~~~h~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~l~i~~~~~~~~~~l~~~i 3323 (3956)
T PRK12467 3247 GSTGKPKGVGVRHGALANHLCWIAEAYELD--ANDRVLLFMSFSFDGAQE-RFLWTLICGGCLVVRDNDLWDPEELWQAI 3323 (3956)
T ss_pred CCCCCcceeeehhHHHHHHHHHHHHhcCCC--cCCEEEEecCccHhHHHH-HHHHHHhCCCEEEECCcccCCHHHHHHHH
Confidence 999999999999999999887776665554 349999999999998874 78999999999999875 7899999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++++|++.++|+++..+++... ..++++||.+++||+++++++.++|.+.++++.++|.||+||++..++.......
T Consensus 3324 ~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~ 3401 (3956)
T PRK12467 3324 HAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGD 3401 (3956)
T ss_pred HHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccc
Confidence 99999999999999999987542 3357899999999999999999999998888999999999998876654332211
Q ss_pred ---ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------h-------hccccCceEE
Q 014435 330 ---VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------E-------LTVNCNLFSY 386 (424)
Q Consensus 330 ---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~-------~~~~TgD~g~ 386 (424)
.....++|+|++|++++|+| ++++++|.|+.|||+|+|+.++.|| + .||+|||+|+
T Consensus 3402 ~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~ 3480 (3956)
T PRK12467 3402 AVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLAR 3480 (3956)
T ss_pred cccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhhe
Confidence 22346899999999999999 7899999999999999999999999 2 3599999999
Q ss_pred EecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 387 FRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 387 ~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+++||.+ | ||++|++|+|.|||++|.+||+|++|+|++
T Consensus 3481 ~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~ 3526 (3956)
T PRK12467 3481 YRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLA 3526 (3956)
T ss_pred ecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEE
Confidence 9999987 3 999999999999999999999999999974
No 67
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=8e-53 Score=415.09 Aligned_cols=399 Identities=25% Similarity=0.411 Sum_probs=314.5
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~-gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.+++||.||.++++++|++|.+. |+++||+|+++++|+++++++++||+++|++++++++.++.+++.+++++++++++
T Consensus 47 ~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 47 GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 45799999999999999999985 99999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCC----CeEEEec-CCCcccc-c--------------cccCCCcccchhhhhhccCCCCCCCCCCCC
Q 014435 101 ITVPELWDKVKDLNL----PAVLLGS-KDKVSSS-G--------------LISRSSKIVSFHDLIELSGSVTDIPDVSVK 160 (424)
Q Consensus 101 i~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (424)
++++.....+..... ....... .+..... . ..........+++....... .........
T Consensus 127 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 205 (562)
T PRK12492 127 VYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRG-LSLKPVPVG 205 (562)
T ss_pred EeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCCcccccHHHHHhccCC-CCCCCCCCC
Confidence 998765443322211 1111000 0000000 0 00001112234443322211 111223456
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc--------cCCCcEEEEecchHHHHHHHHHHHHHhhcCc
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV--------GELDHVVLCVLPMFHVFGLSVILYDQLQKGN 232 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 232 (424)
.+++++++|||||||.||+|.++|+++.............. ...+++++..+|++|.+++....+..+..|.
T Consensus 206 ~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~ 285 (562)
T PRK12492 206 LDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGN 285 (562)
T ss_pred cCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCc
Confidence 78999999999999999999999999877665544333211 1123577899999999998766777778888
Q ss_pred eEEec-CCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEec
Q 014435 233 CVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 311 (424)
Q Consensus 233 ~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 311 (424)
..++. .+.++..+++.++++++|++.++|+++..+.+.......+++++|.+++||+++++.+.++|.+.+ ++++++.
T Consensus 286 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~~~~~ 364 (562)
T PRK12492 286 HNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSGGTALVKATAERWEQLT-GCTIVEG 364 (562)
T ss_pred eEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEeccccCCHHHHHHHHHHh-CCceeec
Confidence 76655 346899999999999999999999999999887665566788999999999999999999999877 6999999
Q ss_pred ccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhc
Q 014435 312 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELT 378 (424)
Q Consensus 312 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~ 378 (424)
||+||++++++...... ....+++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++|
T Consensus 365 YG~tE~~~~~~~~~~~~-~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~ 442 (562)
T PRK12492 365 YGLTETSPVASTNPYGE-LARLGTVGIPVPGTALKVID-DDGNELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGW 442 (562)
T ss_pred cCccccCceeeecCCcc-cccCCccceecCCCEEEEEC-CCCCCCCCCCceEEEEeCCccccccccCchhhhhcccCCCc
Confidence 99999887665543221 33457899999999999999 5889999999999999999999998 479
Q ss_pred cccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 379 VNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 379 ~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|+|||+|+++++|.+ | ++.+|++|+|.+||..|.+||.|.+++|+|
T Consensus 443 ~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~ 496 (562)
T PRK12492 443 FKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCAAIG 496 (562)
T ss_pred eecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999999877 3 889999999999999999999999999875
No 68
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.4e-53 Score=412.94 Aligned_cols=389 Identities=22% Similarity=0.304 Sum_probs=312.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+++||+||.++++++|..|++.|+++|++|+++++|+++++++++||+++|++++++++..+.+++.++++.++++++
T Consensus 29 ~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~ 108 (528)
T PRK07470 29 GDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAM 108 (528)
T ss_pred CCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEE
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCC----CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 101 ITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 101 i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
+++++....+.... .....+.... ......+++++..... .........++++++++|||||||.
T Consensus 109 i~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~ 177 (528)
T PRK07470 109 ICHADFPEHAAAVRAASPDLTHVVAIGG----------ARAGLDYEALVARHLG-ARVANAAVDHDDPCWFFFTSGTTGR 177 (528)
T ss_pred EEcchhHHHHHHHHhhCCcCceEEEeCC----------CcccccHHHHHhcCCC-CCCCcccCCCCCeEEEEeCCCCCCC
Confidence 99987655443321 1111111110 0011234444432211 1122334567899999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC--CCCHHHHHHHHHHccc
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG--KFDIEMALRAIEKYRV 254 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~ 254 (424)
||+|.++|+++...+..............++++..+|++|.+++. .++ .+..|++.++.+ .+++..+++.++++++
T Consensus 178 PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 255 (528)
T PRK07470 178 PKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QLC-QVARGAATVLLPSERFDPAEVWALVERHRV 255 (528)
T ss_pred CcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-HHH-HHhcCceEEEecccCcCHHHHHHHHHhcCC
Confidence 999999999987554332221111123448899999999999985 444 455666665553 4789999999999999
Q ss_pred eEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCC------C
Q 014435 255 TVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPL------V 328 (424)
Q Consensus 255 t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~------~ 328 (424)
|++.++|++++.+.+.......+++++|.+++||+++++...+++.+.+ +..+++.||+||+++.+...... .
T Consensus 256 t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~ 334 (528)
T PRK07470 256 TNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGLGEVTGNITVLPPALHDAEDG 334 (528)
T ss_pred eEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCCcccCCceeecchhhcccccc
Confidence 9999999999999887665666788999999999999999999998888 58899999999988766543221 0
Q ss_pred CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce---
Q 014435 329 GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN--- 393 (424)
Q Consensus 329 ~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~--- 393 (424)
.....+++|.|+++++++++| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 335 ~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~ 413 (528)
T PRK07470 335 PDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDARGFLYIT 413 (528)
T ss_pred ccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEccCCeEEEe
Confidence 123456889999999999999 6889999999999999999999999 469999999999999977
Q ss_pred ----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++++|++|+|.+||+.|.++|.|.+|+|+|
T Consensus 414 GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 449 (528)
T PRK07470 414 GRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLG 449 (528)
T ss_pred CCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEe
Confidence 3 899999999999999999999999999985
No 69
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.2e-52 Score=410.41 Aligned_cols=389 Identities=25% Similarity=0.319 Sum_probs=314.9
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++..+++++++++++
T Consensus 35 ~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 114 (517)
T PRK08008 35 VRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLV 114 (517)
T ss_pred cceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCC------CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 102 TVPELWDKVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 102 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
++++....+.+.. .+.+.+..... .......++++....... .........++++++++|||||||
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG 186 (517)
T PRK08008 115 TSAQFYPMYRQIQQEDATPLRHICLTRVAL-------PADDGVSSFTQLKAQQPA-TLCYAPPLSTDDTAEILFTSGTTS 186 (517)
T ss_pred EecchhHHHHHHHhhccccCcEEEEecCCC-------cccccccCHHHHhccCCc-cccccCCCCCCCeEEEEECCCCCC
Confidence 9988766554431 11222221110 111223344443332221 111122345689999999999999
Q ss_pred CcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccce
Q 014435 176 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVT 255 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 255 (424)
.||+|.++|.++............ ...++++++.+|++|..+....++.++..|+++++.+.+++..+++.++++++|
T Consensus 187 ~PK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 264 (517)
T PRK08008 187 RPKGVVITHYNLRFAGYYSAWQCA--LRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRAT 264 (517)
T ss_pred CCcEEEEehHHHHHHHHHHhhhcC--CCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCc
Confidence 999999999998765332222222 234589999999999888777788999999999999999999999999999999
Q ss_pred EEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCc
Q 014435 256 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGS 335 (424)
Q Consensus 256 ~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 335 (424)
++.++|.+++.+.............++.+.+++ +++++...+|.+.+ +.++++.||+||+++.+....+. ......+
T Consensus 265 ~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~ 341 (517)
T PRK08008 265 ITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERF-GVRLLTSYGMTETIVGIIGDRPG-DKRRWPS 341 (517)
T ss_pred EEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHh-CCeEEeeccccccccccccCCcc-ccccCCc
Confidence 999999999998876544333456788777754 78889999999888 69999999999987655543332 2345578
Q ss_pred cccccCCcEEEEeeCCCCccCCCCCceeEEEec---CCcchhh-------------hhccccCceEEEecCCce------
Q 014435 336 AGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG---PNVTPVF-------------ELTVNCNLFSYFRSNDHN------ 393 (424)
Q Consensus 336 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~---~~~~~gy-------------~~~~~TgD~g~~~~~g~~------ 393 (424)
+|.|+++++++|+| +++++++.|+.|||+++| ++++.|| ++||+|||+|+++++|.+
T Consensus 342 ~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~ 420 (517)
T PRK08008 342 IGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRR 420 (517)
T ss_pred cccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecc
Confidence 99999999999999 689999999999999998 5888898 579999999999999977
Q ss_pred -e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||+++.+||.|.+|+|+|
T Consensus 421 ~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g 453 (517)
T PRK08008 421 CNMIKRGGENVSCVELENIIATHPKIQDIVVVG 453 (517)
T ss_pred cceEEeCCEEECHHHHHHHHHhCCceeeEEEEc
Confidence 3 889999999999999999999999999986
No 70
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.6e-53 Score=413.26 Aligned_cols=383 Identities=17% Similarity=0.196 Sum_probs=304.4
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi-~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
+++.++. ....+||+||.++++++|..|.+.|+ ++||+|+++++|+++++++++||+++|++++|++|.++.+++..+
T Consensus 15 p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~ 94 (540)
T PRK13388 15 DDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNTTRRGAALAAD 94 (540)
T ss_pred CCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecccCChHHHHHH
Confidence 3444443 34579999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEcccchHHHhcCCC---CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEe
Q 014435 92 VKDSNPKLVITVPELWDKVKDLNL---PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALL 168 (424)
Q Consensus 92 l~~~~~~~ii~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 168 (424)
++.+++++++++++....+..... ..+.+. . ..+.+++.... ...+.....++++++++
T Consensus 95 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~-~---------------~~~~~~~~~~~--~~~~~~~~~~~~~a~i~ 156 (540)
T PRK13388 95 IRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVD-T---------------PAYAELVAAAG--ALTPHREVDAMDPFMLI 156 (540)
T ss_pred HHhcCCCEEEEChhhhHHHHhhcccCceEEEcc-c---------------hhhhhhhcccc--CcCCCCCCCCCCeEEEE
Confidence 999999999999877665544321 111110 0 01222222111 11112235679999999
Q ss_pred cCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHH
Q 014435 169 YSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRA 248 (424)
Q Consensus 169 ~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 248 (424)
|||||||.||+|.++|+++............. ..+++++..+|++|.+++...++.++..|+++++.+.+++..+++.
T Consensus 157 ~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~ 234 (540)
T PRK13388 157 FTSGTTGAPKAVRCSHGRLAFAGRALTERFGL--TRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASGFLDD 234 (540)
T ss_pred ECCCCCCCCCEEEecHHHHHHHHHHHHHHhCC--CCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHHHHHH
Confidence 99999999999999999998776665554444 3448999999999999987666678999999999888999999999
Q ss_pred HHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC
Q 014435 249 IEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV 328 (424)
Q Consensus 249 i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~ 328 (424)
++++++|++..+|..+..++...........+++.+ + |+++++...+++.+.+ ++++++.||+||++.++... +
T Consensus 235 i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~-~-- 308 (540)
T PRK13388 235 VRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVRE-P-- 308 (540)
T ss_pred HHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHh-CCceecccccccccceeecC-C--
Confidence 999999999999999998887654332223456643 3 5567888888998888 69999999999988655432 2
Q ss_pred CccCCCccccccCCcEEE-----------EeeCCCCccC-CCCCceeEEEe-cCCcchhh------------hhccccCc
Q 014435 329 GVRRSGSAGTLVAGVEAQ-----------IVSVDTLKPL-PPNQLGEIWVR-GPNVTPVF------------ELTVNCNL 383 (424)
Q Consensus 329 ~~~~~~~~G~~~~~~~~~-----------i~d~~~~~~~-~~g~~Gel~v~-~~~~~~gy------------~~~~~TgD 383 (424)
....+++|+|++++++. ++| ++|+.+ +.++.|||+++ |+.++.|| ++||+|||
T Consensus 309 -~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD 386 (540)
T PRK13388 309 -GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGD 386 (540)
T ss_pred -CCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccc
Confidence 23567899999997653 344 445554 45679999998 99999999 36999999
Q ss_pred eEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 384 FSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 384 ~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|+++++|.+ | ++.+|++|+|.+||++|.+||+|.+|+|+|
T Consensus 387 ~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g 435 (540)
T PRK13388 387 LAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYA 435 (540)
T ss_pred eEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEE
Confidence 9999999976 3 889999999999999999999999999985
No 71
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=3.6e-53 Score=412.92 Aligned_cols=377 Identities=19% Similarity=0.250 Sum_probs=311.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++.+||+||.+++.++|+.|.+.|+++|++|+++++|+.+++++++||+++|++++|+++.++.+++.++++..+++++
T Consensus 22 ~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~i 101 (502)
T TIGR01734 22 QGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELV 101 (502)
T ss_pred CCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEE
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchh
Q 014435 101 ITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGV 180 (424)
Q Consensus 101 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 180 (424)
+++++......... .+.+ ........... .........+++.++++|||||||.||+|
T Consensus 102 i~~~~~~~~~~~~~--~~~~------------------~~~~~~~~~~~--~~~~~~~~~~~~~~~il~TSGTTG~PK~v 159 (502)
T TIGR01734 102 IHTAELSIDAVGTQ--IITL------------------SALEQAETSGG--PVSFDHAVKGDDNYYIIYTSGSTGNPKGV 159 (502)
T ss_pred EecccccccccCCc--eEEc------------------hHhhhhhhhcC--CccccccCCCCCeEEEEECCCCCCCCCEE
Confidence 99876543322111 1000 00111111111 11112234578899999999999999999
Q ss_pred hhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHHHHHccceEE
Q 014435 181 ILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~ 257 (424)
.++|+++............. ..+++++...|++|..++. .++.++..|+++++.++ .++..+++.+.+++++.+
T Consensus 160 ~~s~~~~~~~~~~~~~~~~~--~~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (502)
T TIGR01734 160 QISHDNLVSFTNWMLADFPL--SEGKQFLNQAPFSFDLSVM-DLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVW 236 (502)
T ss_pred EEecHHHHHHHHHHHHhCCC--CCCceEEeecCceechhHH-HHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEE
Confidence 99999998877765555433 3448999999999999884 78889999999998865 588999999999999999
Q ss_pred EechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC---CccCCC
Q 014435 258 WVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV---GVRRSG 334 (424)
Q Consensus 258 ~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~---~~~~~~ 334 (424)
.++|.++..++.........++++|.++++|+++++++.+++.+.++++.+++.||+||+++..+...... ......
T Consensus 237 ~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 316 (502)
T TIGR01734 237 VSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRL 316 (502)
T ss_pred EEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCcc
Confidence 99999998877665445556789999999999999999999999998899999999999876444322111 123445
Q ss_pred ccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh----------------hhccccCceEEEecCCce-----
Q 014435 335 SAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF----------------ELTVNCNLFSYFRSNDHN----- 393 (424)
Q Consensus 335 ~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy----------------~~~~~TgD~g~~~~~g~~----- 393 (424)
++|.+.++++++|+| +++++++.|+.|||+++|+.++.|| .+||+|||+|+++++ ++
T Consensus 317 ~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR 394 (502)
T TIGR01734 317 PIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGR 394 (502)
T ss_pred ccccccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEecc
Confidence 799999999999999 6789999999999999999999999 149999999999976 55
Q ss_pred --e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 --D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 --d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||+.+.++|.|++|+|++
T Consensus 395 ~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~ 428 (502)
T TIGR01734 395 LDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVP 428 (502)
T ss_pred ccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEE
Confidence 3 899999999999999999999999999974
No 72
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.1e-52 Score=411.71 Aligned_cols=385 Identities=22% Similarity=0.257 Sum_probs=312.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++++.+.....++..++++++++++
T Consensus 45 ~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~l 124 (536)
T PRK10946 45 GERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALL 124 (536)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEE
Confidence 45679999999999999999999999999999999999999999999999999998887777788889999999999999
Q ss_pred EEcccc--------hHHHhcCC--CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecC
Q 014435 101 ITVPEL--------WDKVKDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYS 170 (424)
Q Consensus 101 i~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 170 (424)
+++++. ...+.... ...+..... .....+.+++.... ...+.....++++++++||
T Consensus 125 i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~T 190 (536)
T PRK10946 125 IADRQHALFSDDDFLNTLVAEHSSLRVVLLLND------------DGEHSLDDAINHPA--EDFTATPSPADEVAFFQLS 190 (536)
T ss_pred EEeccccccchHHHHHHHHhhCCCceEEEEecC------------CCCccHHHHhhCcc--cccccCCCCCCCeEEEEeC
Confidence 998643 12222211 111211111 11122333332221 1122234457899999999
Q ss_pred CCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHH-HHHHHhhcCceEEecCCCCHHHHHHHH
Q 014435 171 SGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMGKFDIEMALRAI 249 (424)
Q Consensus 171 SGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i 249 (424)
|||||.||+|+++|+++...+.......... .++++++.+|++|.+++.. ..+.++..|+++++.+.+++..+++.+
T Consensus 191 SGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~--~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l 268 (536)
T PRK10946 191 GGSTGTPKLIPRTHNDYYYSVRRSVEICGFT--PQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLI 268 (536)
T ss_pred CCCCCCCcEEEEehHHHHHHHHHHHHhcCCC--CCceEEEecCccccccchhhhHHHHhhcCcEEEECCCCCHHHHHHHH
Confidence 9999999999999999998877665555443 3489999999999988754 467889999999998888999999999
Q ss_pred HHccceEEEechHHHHHHHhcc--ccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNS--LVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPL 327 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~--~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 327 (424)
+++++|++.++|.++..+++.. ......++++|.+++||+++++.+.+++.+.+ ++++++.||+||+...... ...
T Consensus 269 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~-~~~ 346 (536)
T PRK10946 269 EKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQVFGMAEGLVNYTR-LDD 346 (536)
T ss_pred HHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEeecccccceeeec-CCC
Confidence 9999999999999999998762 22334578999999999999999999999988 6999999999996533322 111
Q ss_pred CCccCCCcccccc-CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce
Q 014435 328 VGVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN 393 (424)
Q Consensus 328 ~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~ 393 (424)
.......++|+|+ +++.++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 347 ~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l 425 (536)
T PRK10946 347 SDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYI 425 (536)
T ss_pred ccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcE
Confidence 1133457899998 789999999 6899999999999999999999999 479999999999999987
Q ss_pred -------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||+.|.+||+|.+++|++
T Consensus 426 ~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 464 (536)
T PRK10946 426 TVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVS 464 (536)
T ss_pred EEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEc
Confidence 3 889999999999999999999999999874
No 73
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-52 Score=413.67 Aligned_cols=400 Identities=31% Similarity=0.488 Sum_probs=313.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|++++|++|..+.+++..+++.++++++
T Consensus 46 ~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~i 125 (563)
T PRK06710 46 LGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVI 125 (563)
T ss_pred cCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEE
Confidence 45569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCC----CeEEEecCCCcccccc-----------------ccCCCcccchhhhhhccCCCCCCCCCCC
Q 014435 101 ITVPELWDKVKDLNL----PAVLLGSKDKVSSSGL-----------------ISRSSKIVSFHDLIELSGSVTDIPDVSV 159 (424)
Q Consensus 101 i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (424)
++++.....+..... ..+++........... .........++.+..... ........
T Consensus 126 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 203 (563)
T PRK06710 126 LCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSESETIHLWNSVEKEVN--TGVEVPCD 203 (563)
T ss_pred EEeccchhhhhccchhhccceeEEeccccccccccccccchhhcccccccccccccchhhhhhhhhhccc--cccccccC
Confidence 998865444332211 1111110000000000 000000001111111000 01011112
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK 239 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 239 (424)
..+++++++|||||||.||+|.++|+++.................++++++.+|++|.+|+...++.++..|+++++.+.
T Consensus 204 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 283 (563)
T PRK06710 204 PENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPK 283 (563)
T ss_pred CCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCC
Confidence 35789999999999999999999999987543322222111123346889999999999987667778999999999888
Q ss_pred CCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCC
Q 014435 240 FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCA 319 (424)
Q Consensus 240 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 319 (424)
+++..+++.++++++|++.++|+++..+++........++++|.+++||+++++++.+++.+.+ +..+++.||+||++.
T Consensus 284 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~ 362 (563)
T PRK06710 284 FDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEVQEKFETVT-GGKLVEGYGLTESSP 362 (563)
T ss_pred CCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHHHHHHHHhh-CCCEecccccccCcc
Confidence 9999999999999999999999999999887655555678999999999999999999999888 689999999999887
Q ss_pred ceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEE
Q 014435 320 PISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYF 387 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~ 387 (424)
........ .....+++|+|.+++.++++|++++++++.|+.|||+++|+.++.|| ++||+|||++++
T Consensus 363 ~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~ 441 (563)
T PRK06710 363 VTHSNFLW-EKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYM 441 (563)
T ss_pred ccccCccc-ccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEE
Confidence 54432221 13345789999999999999988899999999999999999999999 479999999999
Q ss_pred ecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 388 RSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 388 ~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+++|.+ | ++.+|++|+|.+||++|.++|.|.+|+|+|
T Consensus 442 ~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~ 486 (563)
T PRK06710 442 DEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 486 (563)
T ss_pred cCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEc
Confidence 999876 3 889999999999999999999999999985
No 74
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.8e-54 Score=426.75 Aligned_cols=376 Identities=23% Similarity=0.305 Sum_probs=295.5
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecC-CCCCC--HHHHHHHHHhcCCe
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA-NPVYT--VSELSKQVKDSNPK 98 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~i~~~l~~~~~~ 98 (424)
.+.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+ ++..+ .+++.++++.++++
T Consensus 53 ~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 131 (631)
T PRK07769 53 ARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPS 131 (631)
T ss_pred eeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCC
Confidence 35799999999999999999986 8999999999999999999999999999999999 55554 67899999999999
Q ss_pred EEEEcccchHHHhcCCC-------CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCC
Q 014435 99 LVITVPELWDKVKDLNL-------PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 99 ~ii~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 171 (424)
++|++++....+..... ..++.. +. ..+.. . .........++++++|+|||
T Consensus 132 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------------~~~~~---~--~~~~~~~~~~~d~a~i~~TS 189 (631)
T PRK07769 132 AILTTTDSAEGVRKFFRARPAKERPRVIAV-DA----------------VPDEV---G--ATWVPPEANEDTIAYLQYTS 189 (631)
T ss_pred EEEEChHHHHHHHHHHhhccccccceEEEc-cc----------------ccccc---c--cccCCCCCCCCCeEEEEeCC
Confidence 99999876554432210 011110 00 00000 0 01111234578999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC--C--CHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK--F--DIEMALR 247 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~ 247 (424)
||||.||+|.++|+++............. ..+++++..+|++|.+|+. ..+.++..|+++++..+ + ++..+++
T Consensus 190 GTTG~PKgV~~sh~~l~~~~~~~~~~~~~--~~~d~~l~~~Pl~h~~gl~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 266 (631)
T PRK07769 190 GSTRIPAGVQITHLNLPTNVLQVIDALEG--QEGDRGVSWLPFFHDMGLI-TVLLPALLGHYITFMSPAAFVRRPGRWIR 266 (631)
T ss_pred CCCCCCcEEEEcHHHHHHHHHHHHHHcCC--CCcceEEEeCCCcCchhhH-HHHHHHhhCCeEEEEChHHHHhCHHHHHH
Confidence 99999999999999998876665544333 3448999999999999996 45556667888877643 4 8899999
Q ss_pred HHHHccc---eEEEechHHHHHHHhcc---c--cccCCCCCeeEEEecCCCCCHHHHHHHHHhCC-----CCeEEecccC
Q 014435 248 AIEKYRV---TVWWVVPPIILALAKNS---L--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIP-----GATIFQGYGM 314 (424)
Q Consensus 248 ~i~~~~~---t~~~~~p~~~~~l~~~~---~--~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~yG~ 314 (424)
.++++++ +.+.++|.++..+.... . ....+++++|.+++||+++++++.++|.+.|+ ...+++.||+
T Consensus 267 ~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~ 346 (631)
T PRK07769 267 ELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGM 346 (631)
T ss_pred HHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccch
Confidence 9999886 78999999887766431 1 11346889999999999999999999999873 2469999999
Q ss_pred ccCCCceeecCCCCC-------------------------ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecC
Q 014435 315 TETCAPISLENPLVG-------------------------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP 369 (424)
Q Consensus 315 tE~~~~~~~~~~~~~-------------------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~ 369 (424)
||++..++....... .....++|+|.++.+++|+|++++++++.|+.|||+++|+
T Consensus 347 TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp 426 (631)
T PRK07769 347 AEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGN 426 (631)
T ss_pred hhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCC
Confidence 998765554322110 0112478999999999999977899999999999999999
Q ss_pred Ccchhh------------h------------------hccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHH
Q 014435 370 NVTPVF------------E------------------LTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLL 411 (424)
Q Consensus 370 ~~~~gy------------~------------------~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l 411 (424)
+++.|| + +||+|||+|+++ +|++ | |+++|++|+|.|||++|
T Consensus 427 ~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l 505 (631)
T PRK07769 427 NIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTA 505 (631)
T ss_pred CccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHH
Confidence 999999 1 699999999995 8877 3 99999999999999999
Q ss_pred hc-CCCccc--ceecC
Q 014435 412 VS-HPEILD--AVVIP 424 (424)
Q Consensus 412 ~~-~p~V~~--a~v~g 424 (424)
.+ ||.|.+ |+|+|
T Consensus 506 ~~~~p~v~~~~~av~~ 521 (631)
T PRK07769 506 QEATKALRTGYVAAFS 521 (631)
T ss_pred HhccccccCCcEEEEE
Confidence 86 899998 77764
No 75
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=3e-53 Score=405.29 Aligned_cols=345 Identities=18% Similarity=0.228 Sum_probs=283.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi-~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
-+-|+||.++++++|++|++.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 37899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred cccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhhh
Q 014435 103 VPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVIL 182 (424)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 182 (424)
+.+..... . . . . . . ......++++++++|||||||.||+|.+
T Consensus 99 ~~~~~~~~------------~---------~---------~-~---~--~--~~~~~~~~~~~~i~~TSGTTG~PKgV~~ 140 (452)
T PRK07445 99 LDQLKLSH------------P---------P---------P-L---P--S--QGILPNLETGWIMIPTGGSSGQIRFAIH 140 (452)
T ss_pred cCcccccc------------C---------C---------C-C---C--c--cccCCCCCCcEEEEeCCCCCCCCcEEEe
Confidence 76532110 0 0 0 0 0 0 0011346889999999999999999999
Q ss_pred cHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEechH
Q 014435 183 THKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPP 262 (424)
Q Consensus 183 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 262 (424)
||+++............. .+++.++.+|++|.+|+. .++.++..|+++++.+............+++++++.++|.
T Consensus 141 t~~~l~~~~~~~~~~~~~---~~~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~ 216 (452)
T PRK07445 141 TWETLTASVQGFQRYFQL---QQVNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPT 216 (452)
T ss_pred chHHHHHHHHHHHHHhcC---CCCceEeccCchhhhhHH-HHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHH
Confidence 999998776655444332 224678899999999995 6778899999999886432222233445788999999999
Q ss_pred HHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCC
Q 014435 263 IILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAG 342 (424)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~ 342 (424)
++..+.+.. ...++++|.+++||+++++++.+++++. ++++++.||+||++..+....+.......+++|+|.++
T Consensus 217 ~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~ 291 (452)
T PRK07445 217 QLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPH 291 (452)
T ss_pred HHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCCcCCccCCC
Confidence 999988632 2347899999999999999999988764 78999999999987655443333222345689999999
Q ss_pred cEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------hhccccCceEEEecCCce-------e-eEeeeeeeChhhH
Q 014435 343 VEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAEL 407 (424)
Q Consensus 343 ~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~i 407 (424)
++++|+ .|+.|||+++|+.++.|| ++||+|||+|++++||++ | ++.+|++|+|.+|
T Consensus 292 ~~v~i~---------~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eI 362 (452)
T PRK07445 292 AQITIP---------ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEV 362 (452)
T ss_pred CeEEEc---------CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHH
Confidence 999997 367899999999999999 589999999999999987 3 9999999999999
Q ss_pred HHHHhcCCCcccceecC
Q 014435 408 EGLLVSHPEILDAVVIP 424 (424)
Q Consensus 408 E~~l~~~p~V~~a~v~g 424 (424)
|++|.+||+|.+|+|+|
T Consensus 363 E~~l~~~p~V~~a~V~g 379 (452)
T PRK07445 363 EAAILATGLVQDVCVLG 379 (452)
T ss_pred HHHHHhCCCcceEEEEe
Confidence 99999999999999985
No 76
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.5e-52 Score=398.05 Aligned_cols=372 Identities=22% Similarity=0.325 Sum_probs=310.4
Q ss_pred cHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 26 SFSMFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 26 Ty~el~~~~~~~a~~L~~-~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
||.||.+.++++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhhhcH
Q 014435 105 ELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTH 184 (424)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~ 184 (424)
+....+............. ....... .............+++++++|||||||.||+|.++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~ 142 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPL-----------------ELAALDD-APAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTH 142 (408)
T ss_pred chhhhccccCCceEEechh-----------------hhhhccc-ccccccccCCCCCCCcEEEEEcCCCCCCCCEEEecc
Confidence 8776665543222221110 0000000 000111111245789999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCC---HHHHHHHHHHccceEEEech
Q 014435 185 KNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD---IEMALRAIEKYRVTVWWVVP 261 (424)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~---~~~~~~~i~~~~~t~~~~~p 261 (424)
+++.............. ..+++++..|++|..++. .++.++..|+++++.+... +..+.+.++++++|.+.++|
T Consensus 143 ~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p 219 (408)
T TIGR01733 143 RSLVNLLAWLARRYGLD--PDDRVLQFASLSFDASVE-EIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTP 219 (408)
T ss_pred HHHHHHHHHHHHhcCCC--CCceEEEecCCccchhHH-HHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCH
Confidence 99998877776644443 448999999999999884 7899999999999887643 68999999999999999999
Q ss_pred HHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC-cc--CCCcccc
Q 014435 262 PIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG-VR--RSGSAGT 338 (424)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~-~~--~~~~~G~ 338 (424)
.+++.+.+... ..++++|.+++||+++++++.+++.+.++++.+++.||+||+++++........ .. +..++|.
T Consensus 220 ~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~ 296 (408)
T TIGR01733 220 SLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGR 296 (408)
T ss_pred HHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCc
Confidence 99999988754 457899999999999999999999999966999999999999876653222111 11 2678999
Q ss_pred ccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhhhh---------------------ccccCceEEEecCCce----
Q 014435 339 LVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFEL---------------------TVNCNLFSYFRSNDHN---- 393 (424)
Q Consensus 339 ~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~---------------------~~~TgD~g~~~~~g~~---- 393 (424)
|.++++++|+|+ ++++++.|+.|||+++|+.++.||-+ ||+|||+|+++++|++
T Consensus 297 ~~~~~~~~i~~~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~g 375 (408)
T TIGR01733 297 PLANTRLYVLDD-DLRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLG 375 (408)
T ss_pred ccCCceEEEECC-CCCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEee
Confidence 999999999995 58999999999999999999999921 9999999999999877
Q ss_pred ---e-eEeeeeeeChhhHHHHHhcCCCccccee
Q 014435 394 ---D-FFCKLFQVAPAELEGLLVSHPEILDAVV 422 (424)
Q Consensus 394 ---d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v 422 (424)
| ++.+|++|+|.+||+.+.++|.|.+|+|
T Consensus 376 R~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 376 RIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred ccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 3 8899999999999999999999999986
No 77
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.3e-52 Score=414.04 Aligned_cols=398 Identities=22% Similarity=0.308 Sum_probs=300.4
Q ss_pred CCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHH
Q 014435 15 LRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVK 93 (424)
Q Consensus 15 ~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~ 93 (424)
++.++. .+.++||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++
T Consensus 29 ~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~ 108 (579)
T PLN03102 29 NRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILR 108 (579)
T ss_pred CCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccccCCHHHHHHHHh
Confidence 344443 3457999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEEcccchHHHhcCC-----------CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCC---CCCCC
Q 014435 94 DSNPKLVITVPELWDKVKDLN-----------LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDI---PDVSV 159 (424)
Q Consensus 94 ~~~~~~ii~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 159 (424)
.++++++|++++....+.... .+.+.+....... .......++.++.......... .....
T Consensus 109 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (579)
T PLN03102 109 HAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPK-----RPSSEELDYECLIQRGEPTPSLVARMFRIQ 183 (579)
T ss_pred ccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEeccccccc-----CCcccccCHHHHHhccCCCCcccccccccC
Confidence 999999999887665544321 1122211110000 0001122344443322211100 01123
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK 239 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 239 (424)
.++++++++|||||||.||+|+++|+++......... .......+++++.+|++|..++. ..+.++..|+++++.+.
T Consensus 184 ~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~--~~~~~~~~~~l~~~pl~h~~g~~-~~~~~~~~g~~~v~~~~ 260 (579)
T PLN03102 184 DEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAII--GWEMGTCPVYLWTLPMFHCNGWT-FTWGTAARGGTSVCMRH 260 (579)
T ss_pred CCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHh--hcCCCCCCeEEecCChhhhcchh-HHHHHHHhcCcEEeecc
Confidence 5689999999999999999999999987544332222 22223347888999999999985 55667788888888888
Q ss_pred CCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCC
Q 014435 240 FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCA 319 (424)
Q Consensus 240 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 319 (424)
+++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.+++++ + ++++++.||+||+++
T Consensus 261 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g~~i~~~YG~tE~~~ 338 (579)
T PLN03102 261 VTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-GFQVMHAYGLTEATG 338 (579)
T ss_pred CChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-CCeEEeecCccccCc
Confidence 89999999999999999999999999998865444334567888999999999999999876 4 689999999999876
Q ss_pred ceeecCCCC------C------ccCCCccccccCCcEEEEeeCCCCccCCC--CCceeEEEecCCcchhh----------
Q 014435 320 PISLENPLV------G------VRRSGSAGTLVAGVEAQIVSVDTLKPLPP--NQLGEIWVRGPNVTPVF---------- 375 (424)
Q Consensus 320 ~~~~~~~~~------~------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gy---------- 375 (424)
.+....... . ....+..+.+.+ .+++.+.+.+++++. ++.|||+++|+.++.||
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~ 416 (579)
T PLN03102 339 PVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEA 416 (579)
T ss_pred cccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhh
Confidence 443221100 0 011223333333 456667566777764 36899999999999999
Q ss_pred --hhccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 376 --ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 376 --~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||+|||+|+++++|.+ | ++.+|++|+|.+||.+|.+||.|.+|+|+|
T Consensus 417 f~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~ 475 (579)
T PLN03102 417 FKHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVA 475 (579)
T ss_pred hccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEe
Confidence 579999999999999987 3 889999999999999999999999999985
No 78
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2e-52 Score=407.90 Aligned_cols=386 Identities=24% Similarity=0.356 Sum_probs=317.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++
T Consensus 27 ~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~ 106 (508)
T TIGR02262 27 DISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVV 106 (508)
T ss_pred CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEE
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCC-----CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 101 ITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 101 i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
+++++....+..... ..++..... ......+.+...... .........++++++++|||||||
T Consensus 107 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG 174 (508)
T TIGR02262 107 FVSGELLPVIKAALGKSPHLEHRVVVGRP----------EAGEVQLAELLATES--EQFKPAATQADDPAFWLYSSGSTG 174 (508)
T ss_pred EEchhhHHHHHHHHhcCCCccEEEEeCCC----------CcccccHHHHhhcCC--CccCCCCCCCCCcEEEEeCCCCCC
Confidence 999876665443211 112111110 011123333332222 122223445789999999999999
Q ss_pred CcchhhhcHHHHHHHHHHH-HhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHcc
Q 014435 176 VSKGVILTHKNFIAASLMI-SAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYR 253 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~ 253 (424)
.||+|.++|+++...+... ..... ...+++++..+|++|.+++...++.++..|+++++.+. +++..+++.|++++
T Consensus 175 ~PK~v~~s~~~~~~~~~~~~~~~~~--~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~ 252 (508)
T TIGR02262 175 MPKGVVHTHSNPYWTAELYARNTLG--IREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQ 252 (508)
T ss_pred CCcEEEEechhHHHHHHHHhHHhcC--CCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHC
Confidence 9999999999998765542 22222 23448999999999999997677788999999988754 68999999999999
Q ss_pred ceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCC
Q 014435 254 VTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRS 333 (424)
Q Consensus 254 ~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~ 333 (424)
+|++.++|.++..+++..........++|.++++|+++++++.+.|.+.+ ++++++.||+||+++++...... ....
T Consensus 253 ~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~--~~~~ 329 (508)
T TIGR02262 253 PTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHIFLSNLPG--DVRY 329 (508)
T ss_pred CcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCceeecCCcc--CCCC
Confidence 99999999999988776544444567899999999999999999999988 68999999999998765543322 3456
Q ss_pred CccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-------e
Q 014435 334 GSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D 394 (424)
Q Consensus 334 ~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d 394 (424)
+++|.|.++++++|+| +++++++.|+.|||+++|+.++.+| ++||+|||+++++++|.+ |
T Consensus 330 ~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~gR~~d 408 (508)
T TIGR02262 330 GTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRNDDGSYTYAGRTDD 408 (508)
T ss_pred CCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcCCccEEEeccccc
Confidence 7899999999999999 7899999999999999999999999 469999999999998866 3
Q ss_pred -eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 395 -FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 395 -i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++.+|++|+|.+||+.|.++|+|.++++++
T Consensus 409 ~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~ 439 (508)
T TIGR02262 409 MLKVSGIYVSPFEIESALIQHPAVLEAAVVG 439 (508)
T ss_pred eeeeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 889999999999999999999999999875
No 79
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.9e-52 Score=410.11 Aligned_cols=400 Identities=25% Similarity=0.393 Sum_probs=316.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++
T Consensus 45 ~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~v 124 (557)
T PRK07059 45 MGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAI 124 (557)
T ss_pred cCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEE
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCC----CCeEEEecCCCcccc---------------ccccCCCcccchhhhhhccCCCCCCCCCCCCC
Q 014435 101 ITVPELWDKVKDLN----LPAVLLGSKDKVSSS---------------GLISRSSKIVSFHDLIELSGSVTDIPDVSVKQ 161 (424)
Q Consensus 101 i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (424)
++++.....+.... ...+.+......... ...........+++.+..... .........+
T Consensus 125 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 203 (557)
T PRK07059 125 VVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGAR-QTFKPVKLGP 203 (557)
T ss_pred EEchhhHHHHHHhhcccCCceeEEecccccccccccccccccccccccccccCCCCcccHHHHhhccCC-CCCCCCCCCc
Confidence 99887655443321 111111110000000 000011122334444433221 1222334567
Q ss_pred CCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhh----c-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEe
Q 014435 162 TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL----V-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 236 (424)
Q Consensus 162 ~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 236 (424)
+++++++|||||||.||+|.++|.++...+......... . ......+++.+|++|.+++....+.++..|++.++
T Consensus 204 ~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~ 283 (557)
T PRK07059 204 DDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNIL 283 (557)
T ss_pred CceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEE
Confidence 899999999999999999999999987765433222211 1 11225678889999999886667777877877665
Q ss_pred cC-CCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCc
Q 014435 237 MG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMT 315 (424)
Q Consensus 237 ~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~t 315 (424)
.+ ..++..+++.++++++|.+.++|.++..+.+.......+++++|.++.||+++++.+.++|.+.+ ++++++.||+|
T Consensus 284 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~t 362 (557)
T PRK07059 284 IPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLS 362 (557)
T ss_pred ecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEeccccCCHHHHHHHHHHh-CCCeeeccccc
Confidence 54 46889999999999999999999999999887665566778999999999999999999999888 69999999999
Q ss_pred cCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccC
Q 014435 316 ETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCN 382 (424)
Q Consensus 316 E~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~Tg 382 (424)
|++.++...... .....+++|.|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+||
T Consensus 363 E~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TG 440 (557)
T PRK07059 363 ETSPVATCNPVD-ATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTG 440 (557)
T ss_pred cccchhhcCCCC-CCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecC
Confidence 998766544322 233467899999999999999 6789999999999999999999998 5899999
Q ss_pred ceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 383 LFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 383 D~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|+++++++|.+ | ++++|++|+|.+||++|.++|+|.+++|+|
T Consensus 441 Dl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~~~V~~~~v~~ 490 (557)
T PRK07059 441 DVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASHPGVLEVAAVG 490 (557)
T ss_pred cEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhCCceeEEEEEe
Confidence 99999999876 3 889999999999999999999999999875
No 80
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-52 Score=404.51 Aligned_cols=361 Identities=24% Similarity=0.298 Sum_probs=300.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+++||+||.++++++|..|+ ++|+|+++++|+++++++++||+++|++++|+++..+.+++..++++++++++
T Consensus 22 ~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 96 (471)
T PRK07787 22 GGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAW 96 (471)
T ss_pred CCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEE
Confidence 4567999999999999999996 46899999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchh
Q 014435 101 ITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGV 180 (424)
Q Consensus 101 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 180 (424)
+++++... ... ....... .... ........++++++++|||||||.||+|
T Consensus 97 l~~~~~~~--~~~--~~~~~~~--------------~~~~------------~~~~~~~~~~~~a~i~~TSGTTG~PK~v 146 (471)
T PRK07787 97 LGPAPDDP--AGL--PHVPVRL--------------HARS------------WHRYPEPDPDAPALIVYTSGTTGPPKGV 146 (471)
T ss_pred EecCCccc--ccc--cceeeec--------------cccc------------cccCCCCCCCceEEEEECCCCCCCCCEE
Confidence 99763110 000 0000000 0000 0011123568999999999999999999
Q ss_pred hhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEec
Q 014435 181 ILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVV 260 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 260 (424)
.++|+++............. ..+++++..+|++|.+|+...++.++..|+++++.+.+++..+++.++ +++|++.++
T Consensus 147 ~~t~~~l~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~ 223 (471)
T PRK07787 147 VLSRRAIAADLDALAEAWQW--TADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGV 223 (471)
T ss_pred EEeHHHHHHHHHHHHHhcCC--CccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcc
Confidence 99999998887666555444 344899999999999999878999999999999998899999999999 999999999
Q ss_pred hHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcccccc
Q 014435 261 PPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLV 340 (424)
Q Consensus 261 p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 340 (424)
|+++..+.+.... ...++++|.+++||+++++.+.++|.+.+ +.++++.||+||++...+..... ....+++|+|+
T Consensus 224 P~~~~~l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~ 299 (471)
T PRK07787 224 PTVWSRIAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTRADG--ERRPGWVGLPL 299 (471)
T ss_pred hHHHHHHHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecCCCC--cccCCcccccC
Confidence 9999999875432 23578999999999999999999999988 68999999999987654433222 34567899999
Q ss_pred CCcEEEEeeCCCCccCC-CCC-ceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e--eE
Q 014435 341 AGVEAQIVSVDTLKPLP-PNQ-LGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D--FF 396 (424)
Q Consensus 341 ~~~~~~i~d~~~~~~~~-~g~-~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d--i~ 396 (424)
++++++|+| +++++++ .|+ .|||+++|+.++.|| ++||+|||+|++++||.+ | ++
T Consensus 300 ~g~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~ 378 (471)
T PRK07787 300 AGVETRLVD-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIK 378 (471)
T ss_pred CCcEEEEEC-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEe
Confidence 999999999 4678776 454 899999999999999 469999999999999876 3 88
Q ss_pred eeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 397 CKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 397 ~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
.+|++|+|.+||++|.++|.|++++|+|
T Consensus 379 ~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 406 (471)
T PRK07787 379 SGGYRIGAGEIETALLGHPGVREAAVVG 406 (471)
T ss_pred eCCEEECHHHHHHHHHhCCCcceEEEEc
Confidence 9999999999999999999999999985
No 81
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-52 Score=408.75 Aligned_cols=393 Identities=21% Similarity=0.271 Sum_probs=309.1
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++
T Consensus 32 ~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~i 111 (540)
T PRK06164 32 EDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWL 111 (540)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEE
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchH-----HHhcCC------CCeEEEecCCCccccccccCCCcccchhhhhhccCCC--CCCCCCCCCCCCEEEE
Q 014435 101 ITVPELWD-----KVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV--TDIPDVSVKQTDAAAL 167 (424)
Q Consensus 101 i~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i 167 (424)
++++++.. .+.... ...+.......... . ......+.+........ .........+++++++
T Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 186 (540)
T PRK06164 112 VVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADAT----P-APAPGARVQLFALPDPAPPAAAGERAADPDAGALL 186 (540)
T ss_pred EEccccccccHHHHhhcccccccCCcceEEEeccCcccC----C-CCCcccccccccccccCCcccccccCCCCCceEEE
Confidence 99876421 121111 11111111000000 0 00000001111100000 0001122346889999
Q ss_pred ecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHH
Q 014435 168 LYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALR 247 (424)
Q Consensus 168 ~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 247 (424)
+|||||||.||+|.++|+++.............. .++++++.+|++|.+|+. .++.++..|+++++.+.+++..+++
T Consensus 187 ~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~--~~~~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~ 263 (540)
T PRK06164 187 FTTSGTTSGPKLVLHRQATLLRHARAIARAYGYD--PGAVLLAALPFCGVFGFS-TLLGALAGGAPLVCEPVFDAARTAR 263 (540)
T ss_pred EECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCC--CCCEEEEcCCchhHHHHH-HHHHHHhcCceEEecCCCCHHHHHH
Confidence 9999999999999999999998877666555543 448999999999999995 7889999999999999899999999
Q ss_pred HHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecC-CCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCC
Q 014435 248 AIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGA-APLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENP 326 (424)
Q Consensus 248 ~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 326 (424)
.++++++|+++++|+++..|.+.. ....+++++|.+..+| .+...++.+++.+. ++++++.||+||+++.++....
T Consensus 264 ~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~ 340 (540)
T PRK06164 264 ALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR--GVPLTGLYGSSEVQALVALQPA 340 (540)
T ss_pred HHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--CCceecceeeccccceeeccCC
Confidence 999999999999999999998873 3445688999887765 55556777777665 6899999999999876655433
Q ss_pred CCC-ccCCCcccccc-CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCC
Q 014435 327 LVG-VRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSND 391 (424)
Q Consensus 327 ~~~-~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g 391 (424)
... .....+.|.+. ++++++|+|++++++++.|+.||||++|++++.|| ++||+|||+|+++++|
T Consensus 341 ~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g 420 (540)
T PRK06164 341 TDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDG 420 (540)
T ss_pred CCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcCCc
Confidence 211 22334567775 78999999988899999999999999999999999 5799999999999999
Q ss_pred ce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 392 HN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 392 ~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
.+ | ++.+|++|+|.+||+.|.+||+|.+++|+|
T Consensus 421 ~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~ 461 (540)
T PRK06164 421 QFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVG 461 (540)
T ss_pred eEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEe
Confidence 76 3 899999999999999999999999999875
No 82
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-51 Score=407.56 Aligned_cols=402 Identities=23% Similarity=0.335 Sum_probs=315.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++.+||.||.+++.++|..|.++|+++|++|+++++|+++++++++||+++|++++|++|..+.+++.+++++++++++
T Consensus 55 ~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~i 134 (567)
T PRK06178 55 YGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVL 134 (567)
T ss_pred CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEE
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCC----CeEEEec-CCCccccccccCC-------CcccchhhhhhccCC-CCCCCCCCCCCCCEEEE
Q 014435 101 ITVPELWDKVKDLNL----PAVLLGS-KDKVSSSGLISRS-------SKIVSFHDLIELSGS-VTDIPDVSVKQTDAAAL 167 (424)
Q Consensus 101 i~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i 167 (424)
++++...+.+..+.. ..+.+.. .+........... .....+.+++..... ..........+++++++
T Consensus 135 i~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 214 (567)
T PRK06178 135 LALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAAL 214 (567)
T ss_pred EEccchHHHHHHhhccCCcceEEEeccccccccccccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEE
Confidence 999887766554321 1222111 1100000000000 000111122211110 01112233567899999
Q ss_pred ecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHH
Q 014435 168 LYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALR 247 (424)
Q Consensus 168 ~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 247 (424)
+|||||||.||+|.++|.++........... ......++++..+|++|.+|+...++.++..|+++++.+++++..++.
T Consensus 215 ~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~ 293 (567)
T PRK06178 215 NYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA-VVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMA 293 (567)
T ss_pred EeCCCCCCCCceEEeccHHHHHHHHHHHHHh-ccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHH
Confidence 9999999999999999999887654432221 223445899999999999998767888999999999999899999999
Q ss_pred HHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEe--cCCCCCHHHHHHHHHhCCCCeEE-ecccCccCCCceeec
Q 014435 248 AIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGS--GAAPLGKELMEDCQKNIPGATIF-QGYGMTETCAPISLE 324 (424)
Q Consensus 248 ~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~--~g~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~ 324 (424)
.++++++|++.++|..+..+.........+++++|.+.. .++.+++++.+.|++.++ ..++ +.||+||+++.+...
T Consensus 294 ~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~ 372 (567)
T PRK06178 294 AVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTG-SVLAEAAWGMTETHTCDTFT 372 (567)
T ss_pred HHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHHHHHhC-Ccccccccccccccccceec
Confidence 999999999999999999988765555556778888654 458999999999999885 5555 579999987655443
Q ss_pred CCCC-----CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEE
Q 014435 325 NPLV-----GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYF 387 (424)
Q Consensus 325 ~~~~-----~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~ 387 (424)
.... ....++++|+|++|++++|+|++++++++.|+.|||+++|++++.|| ++||+|||+|++
T Consensus 373 ~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~ 452 (567)
T PRK06178 373 AGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKI 452 (567)
T ss_pred cccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEE
Confidence 2111 12345679999999999999987899999999999999999999999 579999999999
Q ss_pred ecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 388 RSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 388 ~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+++|.+ | ++.+|++|+|.+||+++.++|+|.+++|+|
T Consensus 453 ~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~ 497 (567)
T PRK06178 453 DEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVG 497 (567)
T ss_pred ecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEc
Confidence 999876 3 889999999999999999999999999875
No 83
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=7.4e-53 Score=489.27 Aligned_cols=386 Identities=19% Similarity=0.263 Sum_probs=320.9
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
+++.++. .++++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++|++|.++.+++.+++
T Consensus 525 p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il 604 (5163)
T PRK12316 525 PEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYML 604 (5163)
T ss_pred CCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHH
Confidence 4445554 345799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+.+++++++++.+....+.......++.... ......... ...+.....++++++++||||
T Consensus 605 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~--~~~~~~~~~~~~~a~ii~TSG 665 (5163)
T PRK12316 605 EDSGVQLLLSQSHLGRKLPLAAGVQVLDLDR-----------------PAAWLEGYS--EENPGTELNPENLAYVIYTSG 665 (5163)
T ss_pred HhCCCCEEEEChhhhhhCCcccCceEEEecC-----------------cchhhccCC--CCCCCCCCCCCCeEEEEECCC
Confidence 9999999999876654432211111111100 000011001 122223456789999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC---CCCHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG---KFDIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i 249 (424)
|||.||||+++|+++...+.......... .+++++..+|++|..++. .++.+|..|+++++.+ .+++..+.+.+
T Consensus 666 STG~PKgV~~~h~~l~~~~~~~~~~~~~~--~~d~~l~~~p~~fd~~~~-~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i 742 (5163)
T PRK12316 666 STGKPKGAGNRHRALSNRLCWMQQAYGLG--VGDTVLQKTPFSFDVSVW-EFFWPLMSGARLVVAAPGDHRDPAKLVELI 742 (5163)
T ss_pred cCCCCCEeeEcCHHHHHHHHHHHHhcCCC--CCCEEEeeCCeehHHHHH-HHHHHHhCCCEEEECCccccCCHHHHHHHH
Confidence 99999999999999998877766655543 348999999999999985 7889999999999985 37899999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++++|++.++|++++.|++... ...++++|.+++||+++++++.++|.+.+++++++|.||+||++..++.......
T Consensus 743 ~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~ 820 (5163)
T PRK12316 743 NREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEE 820 (5163)
T ss_pred HHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccc
Confidence 99999999999999999987543 2357899999999999999999999888888999999999998854443332222
Q ss_pred ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------------hhccccCceEEEecC
Q 014435 330 VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------------ELTVNCNLFSYFRSN 390 (424)
Q Consensus 330 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------------~~~~~TgD~g~~~~~ 390 (424)
.....++|+|++|++++|+| ++++++|.|+.|||+|+|+.++.|| ++||+|||+|++++|
T Consensus 821 ~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~d 899 (5163)
T PRK12316 821 GGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRAD 899 (5163)
T ss_pred cCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCC
Confidence 34566899999999999999 6899999999999999999999999 138999999999999
Q ss_pred Cce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 391 DHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 391 g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|.+ | ||++|++|+|.|||++|.+||+|++|+|++
T Consensus 900 G~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~ 941 (5163)
T PRK12316 900 GVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLA 941 (5163)
T ss_pred CCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEE
Confidence 987 3 999999999999999999999999999975
No 84
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-52 Score=405.43 Aligned_cols=385 Identities=24% Similarity=0.320 Sum_probs=314.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+.+||.||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|+++++++|..+.+++..+++.++++.++
T Consensus 35 ~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~ 114 (524)
T PRK06188 35 DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLI 114 (524)
T ss_pred CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eccc-chHHHhcCCCC----eEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPE-LWDKVKDLNLP----AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
+++. +.......... ..+...... .....+.+...... .........++++++++|||||||.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~ 182 (524)
T PRK06188 115 VDPAPFVERALALLARVPSLKHVLTLGPV----------PDGVDLLAAAAKFG--PAPLVAAALPPDIAGLAYTGGTTGK 182 (524)
T ss_pred EecchhhHHHHHHhhhcCCceEEEEeCCc----------cchhhHHHhhhccC--cccccccCCCCCeEEEEeCCCCCCC
Confidence 9876 33332221110 011111100 00001111111001 1111122345679999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
||+|.++|.++.............. .++++++.+|++|..++. ++.++..|+++++.+.+++..+++.++++++|+
T Consensus 183 pk~v~~s~~~l~~~~~~~~~~~~~~--~~~~~l~~~pl~~~~g~~--~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 258 (524)
T PRK06188 183 PKGVMGTHRSIATMAQIQLAEWEWP--ADPRFLMCTPLSHAGGAF--FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITA 258 (524)
T ss_pred CceeeeehHHHHHHHHHHHhhcCCC--cCcEEEEecCchhhhhHH--HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEE
Confidence 9999999999998777655554443 348999999999998874 567899999999999999999999999999999
Q ss_pred EEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC----CccC
Q 014435 257 WWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV----GVRR 332 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~----~~~~ 332 (424)
++++|+++..+++.......+++++|.+++||++++++..+.+.+.+ +..+++.||+||++..++...... ....
T Consensus 259 ~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 337 (524)
T PRK06188 259 TFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMVITYLRKRDHDPDDPKR 337 (524)
T ss_pred EEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCceeecCchhcccccccc
Confidence 99999999999988766666789999999999999999999998888 578999999999976555433221 1235
Q ss_pred CCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-------
Q 014435 333 SGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN------- 393 (424)
Q Consensus 333 ~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~------- 393 (424)
..++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 338 ~~~~G~p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~ 416 (524)
T PRK06188 338 LTSCGRPTPGLRVALLD-EDGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDEDGFYYIVDRKK 416 (524)
T ss_pred CCccccccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcCCccEEEEeccc
Confidence 56899999999999999 5799999999999999999999999 569999999999999876
Q ss_pred e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++++|++|+|.+||++|.++|+|.+++|+|
T Consensus 417 ~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~ 448 (524)
T PRK06188 417 DMIVTGGFNVFPREVEDVLAEHPAVAQVAVIG 448 (524)
T ss_pred cceecCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 3 889999999999999999999999999875
No 85
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.5e-53 Score=421.05 Aligned_cols=375 Identities=20% Similarity=0.299 Sum_probs=290.5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecC-CCCCC--HHHHHHHHHhcCCeE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA-NPVYT--VSELSKQVKDSNPKL 99 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~i~~~l~~~~~~~ 99 (424)
+.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+ ++.++ .+++.++++.+++++
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 145 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTV 145 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCE
Confidence 4799999999999999999986 9999999999999999999999999999999999 57766 789999999999999
Q ss_pred EEEcccchHHHhcCCC-------CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 100 VITVPELWDKVKDLNL-------PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 100 ii~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+|++++....+..... ..++.... +..... .........++++++|+||||
T Consensus 146 li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------------------~~~~~~--~~~~~~~~~~~d~a~i~yTSG 203 (612)
T PRK12476 146 VLTTTAAAEAVEGFLRNLPRLRRPRVIAIDA--------------------IPDSAG--ESFVPVELDTDDVSHLQYTSG 203 (612)
T ss_pred EEEcHHHHHHHHHHHhhcccccCceEEEecc--------------------cccccc--ccccCCCCCCCceEEEEeCCC
Confidence 9998876654432210 11111100 000000 111112345689999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CC--CHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KF--DIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~--~~~~~~~~i 249 (424)
|||.||+|.++|+++...+......... ...++++++.+|++|.+|+...++..+..|.++++.+ .+ ++..+++.+
T Consensus 204 TTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i 282 (612)
T PRK12476 204 STRPPVGVEITHRAVGTNLVQMILSIDL-LDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKAL 282 (612)
T ss_pred CCCCCceEEeeHHHHHHHHHHHHHHhcc-CCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHH
Confidence 9999999999999998765544333331 2344899999999999999655555566565555543 23 889999999
Q ss_pred H--HccceEEEechHHHHHHHhccc----cccCCCCCeeEEEecCCCCCHHHHHHHHHhCC-----CCeEEecccCccCC
Q 014435 250 E--KYRVTVWWVVPPIILALAKNSL----VRKFDISSLKLVGSGAAPLGKELMEDCQKNIP-----GATIFQGYGMTETC 318 (424)
Q Consensus 250 ~--~~~~t~~~~~p~~~~~l~~~~~----~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~yG~tE~~ 318 (424)
+ ++++++++.+|.++..++.... ....+++++| +++||+++++++.++|.+.|+ ...+++.||+||++
T Consensus 283 ~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~ 361 (612)
T PRK12476 283 SEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEAT 361 (612)
T ss_pred hhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhh
Confidence 5 4899999999998887776421 1234678999 999999999999999999773 24599999999987
Q ss_pred CceeecCCCCC-------------------------ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcch
Q 014435 319 APISLENPLVG-------------------------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTP 373 (424)
Q Consensus 319 ~~~~~~~~~~~-------------------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 373 (424)
..++...+... ....+++|+|+++++++|+|++++++++.|+.|||+++|++++.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~ 441 (612)
T PRK12476 362 LFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGR 441 (612)
T ss_pred eeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccc
Confidence 65443222100 01235789999999999999655999999999999999999999
Q ss_pred hh-----------h--------------------hccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhc-
Q 014435 374 VF-----------E--------------------LTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVS- 413 (424)
Q Consensus 374 gy-----------~--------------------~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~- 413 (424)
|| . +||+|||+|+++ +|++ | |+++|++|+|.|||++|.+
T Consensus 442 GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~ 520 (612)
T PRK12476 442 GYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEA 520 (612)
T ss_pred cccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHh
Confidence 99 1 399999999985 8887 3 9999999999999999985
Q ss_pred CCCccc--ceec
Q 014435 414 HPEILD--AVVI 423 (424)
Q Consensus 414 ~p~V~~--a~v~ 423 (424)
||.|.+ ++|+
T Consensus 521 ~p~V~~~~v~v~ 532 (612)
T PRK12476 521 SPMVRRGYVTAF 532 (612)
T ss_pred cccccCCcEEEE
Confidence 899999 4444
No 86
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=2.2e-52 Score=449.23 Aligned_cols=382 Identities=19% Similarity=0.276 Sum_probs=315.3
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++.+++. ..+.+||+||.++++++|+.|.+.|+++|++|+++++++++++++++||+++|++++|++|.++.+++..++
T Consensus 472 p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l 551 (1296)
T PRK10252 472 PDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMML 551 (1296)
T ss_pred CCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHH
Confidence 3444443 455799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+.+++++++++.+....+.....-. . ..+....... ...+.....++++++++||||
T Consensus 552 ~~~~~~~~i~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~---~~~~~~~~~~~~~a~i~~TSG 608 (1296)
T PRK10252 552 EDARPSLLITTADQLPRFADVPDLT-S-------------------LCYNAPLAPQ---GAAPLQLSQPHHTAYIIFTSG 608 (1296)
T ss_pred HhCCCCEEEECcchhhhcccCCCce-e-------------------eecccccccc---cCCCCCCCCCCCeEEEEECCC
Confidence 9999999999987655443321000 0 0011111000 111112235789999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i 249 (424)
|||.||+|+++|+++............... +++++...|++|..+++ .++.+|..|+++++.++ .++..+.+.+
T Consensus 609 STG~PKgV~~~h~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i 685 (1296)
T PRK10252 609 STGRPKGVMVGQTAIVNRLLWMQNHYPLTA--DDVVLQKTPCSFDVSVW-EFFWPFIAGAKLVMAEPEAHRDPLAMQQFF 685 (1296)
T ss_pred CCCCCCEEEeccHHHHHHHHHHHHhcCCCC--CCEEEEeCCcchhhhHH-HHHHHHhCCCEEEECChhccCCHHHHHHHH
Confidence 999999999999999988776665555533 49999999999998885 77889999999999763 6899999999
Q ss_pred HHccceEEEechHHHHHHHhcccccc--CCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPL 327 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~--~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 327 (424)
+++++|++.++|+++..+++...... ..++++|.+++||+++++++.++|.+.+ ++++++.||+||++..++.....
T Consensus 686 ~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~ 764 (1296)
T PRK10252 686 AEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAF 764 (1296)
T ss_pred HHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecc
Confidence 99999999999999999887643322 2468999999999999999999999877 68999999999988766543322
Q ss_pred CC-----ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------------hhccccCc
Q 014435 328 VG-----VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------------ELTVNCNL 383 (424)
Q Consensus 328 ~~-----~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------------~~~~~TgD 383 (424)
.. .....++|+|+++++++|+| +++++++.|..|||+++|+.++.|| ++||+|||
T Consensus 765 ~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGD 843 (1296)
T PRK10252 765 GEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGD 843 (1296)
T ss_pred cccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCc
Confidence 11 23346799999999999999 7999999999999999999999999 12899999
Q ss_pred eEEEecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceec
Q 014435 384 FSYFRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 384 ~g~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~ 423 (424)
+|++++||.+ | ++++|++|+|.|||++|.+||+|.+|+|+
T Consensus 844 l~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~ 891 (1296)
T PRK10252 844 VARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTH 891 (1296)
T ss_pred eEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEE
Confidence 9999999987 3 99999999999999999999999999765
No 87
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.4e-52 Score=452.27 Aligned_cols=389 Identities=19% Similarity=0.204 Sum_probs=307.0
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++++||+||.++++++|++|++.|+++|++|+++++|+++++++++||+++|++++|++|.++.+++..+++.++++++
T Consensus 267 ~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~l 346 (1389)
T TIGR03443 267 KTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRAL 346 (1389)
T ss_pred CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEE
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccch---HHHhcCCC---------CeEEEecCCCccccccccCCCcccch--hhhhhccCC-CCCCCCCCCCCCCEE
Q 014435 101 ITVPELW---DKVKDLNL---------PAVLLGSKDKVSSSGLISRSSKIVSF--HDLIELSGS-VTDIPDVSVKQTDAA 165 (424)
Q Consensus 101 i~~~~~~---~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~ 165 (424)
+++.+.. ..+..... ..+........ ....... .+....... ..........+++++
T Consensus 347 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a 418 (1389)
T TIGR03443 347 IVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSL--------VGGSLEGGETDVLAPYQALKDTPTGVVVGPDSNP 418 (1389)
T ss_pred EEeccccccchhhhhhhhcccccccccceEEecccccc--------cccccccccccccccccccccCCCCCcCCCCCce
Confidence 9876421 11111000 00000000000 0000000 000000000 001111234578999
Q ss_pred EEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCH
Q 014435 166 ALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDI 242 (424)
Q Consensus 166 ~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~ 242 (424)
+++|||||||.||||+++|+++...+.......... .+++++...|++|..++. .++.+|..|+++++++. .++
T Consensus 419 ~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~~~~~~~~~d~~~~-~i~~~L~~G~~l~~~~~~~~~~~ 495 (1389)
T TIGR03443 419 TLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLS--ENDKFTMLSGIAHDPIQR-DMFTPLFLGAQLLVPTADDIGTP 495 (1389)
T ss_pred EEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCC--CCCEEEEecCceecchHH-HHHHHHhCCCEEEEcChhhccCH
Confidence 999999999999999999999998876665554443 348999999999988874 78899999999999864 368
Q ss_pred HHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCcee
Q 014435 243 EMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPIS 322 (424)
Q Consensus 243 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~ 322 (424)
..+.+.++++++|++.++|++++.|.... ...++++|.+++||+++++...+++.+.++++++++.||+||++..++
T Consensus 496 ~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 572 (1389)
T TIGR03443 496 GRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVS 572 (1389)
T ss_pred HHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEE
Confidence 89999999999999999999999887543 235789999999999999999999998888899999999999887665
Q ss_pred ecCCCCC---------ccCCCccccccCCcEEEEeeCCC-CccCCCCCceeEEEecCCcchhhh----------------
Q 014435 323 LENPLVG---------VRRSGSAGTLVAGVEAQIVSVDT-LKPLPPNQLGEIWVRGPNVTPVFE---------------- 376 (424)
Q Consensus 323 ~~~~~~~---------~~~~~~~G~~~~~~~~~i~d~~~-~~~~~~g~~Gel~v~~~~~~~gy~---------------- 376 (424)
....... .....++|+|+++++++|+|+++ +++++.|+.|||+|+|+.++.||-
T Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~ 652 (1389)
T TIGR03443 573 YFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFV 652 (1389)
T ss_pred EEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCccc
Confidence 4322110 11345789999999999999543 688999999999999999999991
Q ss_pred -------------------------hccccCceEEEecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceec
Q 014435 377 -------------------------LTVNCNLFSYFRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 377 -------------------------~~~~TgD~g~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~ 423 (424)
+||+|||+|++++||.+ | |+++|++|+|.|||++|.+||.|.+|+|+
T Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~ 732 (1389)
T TIGR03443 653 DPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTL 732 (1389)
T ss_pred CcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEE
Confidence 48999999999999987 3 99999999999999999999999999886
No 88
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-53 Score=381.41 Aligned_cols=395 Identities=23% Similarity=0.296 Sum_probs=324.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCE-EEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDV-VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~-V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
.+||.|+..++.++|+.|.+.|++++++ ++|+++.+.+|+.+++||++.+..+|.+...+..+.+.+.|++++++.|+|
T Consensus 89 w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T 168 (678)
T KOG1180|consen 89 WMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFT 168 (678)
T ss_pred eecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEe
Confidence 3599999999999999999999997765 999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcCCC-----CeEEEecC-CCcccccc----ccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 103 VPELWDKVKDLNL-----PAVLLGSK-DKVSSSGL----ISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 103 ~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+.+.+..+..... +.++.... +....... ......+.+|++++..+.+.. .++.++.++|+|+||||||
T Consensus 169 ~~~LL~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~-~~~~~P~p~Dia~IMYTSG 247 (678)
T KOG1180|consen 169 DSELLPKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE-IPPHPPKPSDIACIMYTSG 247 (678)
T ss_pred CHHHHHHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC-CCCCCCCCCceEEEEEcCC
Confidence 9998886655422 22222221 11111111 123467889999999888643 4445558899999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCH--------HH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDI--------EM 244 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~--------~~ 244 (424)
|||.||||+++|+|+++.+........ .-.+.|+++.++|+.|++.+. .-+.+++.|+.+-..++.+. ..
T Consensus 248 STG~PKGVml~H~NiVA~~~G~~~~v~-~lg~~D~yi~yLPLAHIlEl~-aE~~~ft~G~~iGY~S~~TLtdts~ki~kg 325 (678)
T KOG1180|consen 248 STGLPKGVMLTHSNIVAGVTGVGENVP-ELGPKDRYIAYLPLAHILELT-AELVCFTWGGRIGYSSPLTLTDTSSKIKKG 325 (678)
T ss_pred CCCCCceEEEecccHHhhhhhhcccCc-ccCCCceEEEechHHHHHHHH-HHHHHHhhCCEeecCCcceecccchhhccC
Confidence 999999999999999999888776664 344569999999999999996 55788999999887654221 22
Q ss_pred HHHHHHHccceEEEechHHHHHHHhccc------------------------------------------cccCCCCCee
Q 014435 245 ALRAIEKYRVTVWWVVPPIILALAKNSL------------------------------------------VRKFDISSLK 282 (424)
Q Consensus 245 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~------------------------------------------~~~~~~~~lr 282 (424)
.-..+...+||.+.++|.+++++.+.-. .+...-.+||
T Consensus 326 ~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR 405 (678)
T KOG1180|consen 326 CKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLR 405 (678)
T ss_pred CcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceE
Confidence 2334567899999999999988754200 0000114899
Q ss_pred EEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCC--
Q 014435 283 LVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQ-- 360 (424)
Q Consensus 283 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~-- 360 (424)
++++||+|++++..+.+.-.+ .+++.++||.||+++..+...+. +...+.+|.|++-++++++|-+++...+.+.
T Consensus 406 ~~LsGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~e~~--d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PP 482 (678)
T KOG1180|consen 406 YILSGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVLEPE--DFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPP 482 (678)
T ss_pred EEEeCCCCCCHHHHHHHHHhc-cccccccccccchhcccEecChh--hcccccccCCccceEEEEEEhhhcCccCCCCCC
Confidence 999999999999999988887 57999999999999888877776 6778899999999999999987776665555
Q ss_pred ceeEEEecCCcchhh--------------hh--ccccCceEEEecCCce---e-----eEe-eeeeeChhhHHHHHhcCC
Q 014435 361 LGEIWVRGPNVTPVF--------------EL--TVNCNLFSYFRSNDHN---D-----FFC-KLFQVAPAELEGLLVSHP 415 (424)
Q Consensus 361 ~Gel~v~~~~~~~gy--------------~~--~~~TgD~g~~~~~g~~---d-----i~~-~G~~v~~~~iE~~l~~~p 415 (424)
.|||+++|+++..|| ++ ||+|||+|++++||.+ | ++. +|+.|+++-||.+++..|
T Consensus 483 rGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p 562 (678)
T KOG1180|consen 483 RGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSP 562 (678)
T ss_pred CceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCc
Confidence 899999999999999 56 9999999999999998 3 554 999999999999999999
Q ss_pred CcccceecC
Q 014435 416 EILDAVVIP 424 (424)
Q Consensus 416 ~V~~a~v~g 424 (424)
-|...||++
T Consensus 563 ~V~NICvyA 571 (678)
T KOG1180|consen 563 YVDNICVYA 571 (678)
T ss_pred chhheEEec
Confidence 999999875
No 89
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-52 Score=404.70 Aligned_cols=383 Identities=22% Similarity=0.292 Sum_probs=299.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++++||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++|+++.++++++.++++++++++++
T Consensus 22 ~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i 101 (501)
T PRK13390 22 GEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLV 101 (501)
T ss_pred CeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCCCe-EEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchh
Q 014435 102 TVPELWDKVKDLNLPA-VLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGV 180 (424)
Q Consensus 102 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 180 (424)
+++............. ..+.... .......+++...... + .....++.++++|||||||.||+|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-----~-~~~~~~~~a~i~~TSGTTG~PKgV 166 (501)
T PRK13390 102 ASAALDGLAAKVGADLPLRLSFGG---------EIDGFGSFEAALAGAG-----P-RLTEQPCGAVMLYSSGTTGFPKGI 166 (501)
T ss_pred EcchhhhHHHHhhhccceEEEecC---------cccccccHHHHhcccC-----C-CCCCCcccEEEEeCCCCCCCCCEE
Confidence 9876543322221110 1111000 0011122332222111 0 011223579999999999999999
Q ss_pred hh--cHHHHHHHHHHHH--hhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 181 IL--THKNFIAASLMIS--AHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 181 ~~--t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
.+ +|.++........ .........+++++..+|++|.+++.. ....+..|+++++.+.+++..+++.|+++++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~ 245 (501)
T PRK13390 167 QPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGTVVLAKRFDAQATLGHVERYRITV 245 (501)
T ss_pred EeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHH-HHHHHhcCceEEEcCCcCHHHHHHHHHHcCCeE
Confidence 95 4544433211000 111122234589999999999998753 344567899999988899999999999999999
Q ss_pred EEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCC
Q 014435 257 WWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSG 334 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 334 (424)
+.++|+++..+...... ...+++++|.++.||+++++++.+.+.+.+ +..+++.||+||+++++...... .....+
T Consensus 246 ~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~ 323 (501)
T PRK13390 246 TQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFIDSPD-WLAHPG 323 (501)
T ss_pred EEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEecchh-hccCCC
Confidence 99999999998865432 334578999999999999999999999987 58999999999998755443322 123567
Q ss_pred ccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh---------------hhccccCceEEEecCCce------
Q 014435 335 SAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF---------------ELTVNCNLFSYFRSNDHN------ 393 (424)
Q Consensus 335 ~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy---------------~~~~~TgD~g~~~~~g~~------ 393 (424)
++|+|.++ +++|+| +++++++.|+.|||+++|+.++.|| ++|++|||+|+++++|.+
T Consensus 324 ~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~ 401 (501)
T PRK13390 324 SVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRK 401 (501)
T ss_pred CcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeecc
Confidence 89999999 799999 6899999999999999999999999 248999999999999987
Q ss_pred e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||++|.+||.|.+++|+|
T Consensus 402 ~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~ 434 (501)
T PRK13390 402 SFMIISGGVNIYPQETENALTMHPAVHDVAVIG 434 (501)
T ss_pred ccceeECCeeeCHHHHHHHHHhCCCeeEEEEEe
Confidence 3 899999999999999999999999999875
No 90
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.5e-52 Score=479.86 Aligned_cols=386 Identities=22% Similarity=0.283 Sum_probs=319.5
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
+++.++. .++.+||+||.++++++|++|.++|+++|++|++++++++++++++|||+++|++++|++|.++.+++.+++
T Consensus 1588 p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il 1667 (3956)
T PRK12467 1588 PEAVALVFGEQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMI 1667 (3956)
T ss_pred CCCeEEEeCCcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHH
Confidence 4444544 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCC-CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNL-PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 171 (424)
+.+++++++++++....+..... ..+.+... .+++.... ...+.....++++++++|||
T Consensus 1668 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~--~~~~~~~~~~~~~ayiiyTS 1727 (3956)
T PRK12467 1668 EDSGIELLLTQSHLQARLPLPDGLRSLVLDQE------------------DDWLEGYS--DSNPAVNLAPQNLAYVIYTS 1727 (3956)
T ss_pred HhCCCCEEEeChhhhhhCccccCCcEEEeccc------------------cchhccCC--CCCCCCCCCCcCcEEEEECC
Confidence 99999999998776544322111 11111100 00111111 11222345678999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRA 248 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~ 248 (424)
||||.||||+++|+++.+.+.......... .+++++...|++|..+++ .++.+|..|+++++.+. .++..+++.
T Consensus 1728 GSTG~PKGV~~th~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lvi~~~~~~~~~~~l~~~ 1804 (3956)
T PRK12467 1728 GSTGRPKGAGNRHGALVNRLCATQEAYQLS--AADVVLQFTSFAFDVSVW-ELFWPLINGARLVIAPPGAHRDPEQLIQL 1804 (3956)
T ss_pred CcCCCCCEEEEcCHHHHHHHHHHHHhcCCC--cccEEEEecCccHHHHHH-HHHHHHhCCCEEEEcChhhcCCHHHHHHH
Confidence 999999999999999998877665555443 348999999999999985 78899999999999864 578999999
Q ss_pred HHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCC-
Q 014435 249 IEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPL- 327 (424)
Q Consensus 249 i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~- 327 (424)
++++++|++.++|+++..|.+... ....++++|.+++||+++++++.++|.+.+++.+++|.||+||++..++.....
T Consensus 1805 i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~ 1883 (3956)
T PRK12467 1805 IERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRR 1883 (3956)
T ss_pred HHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccc
Confidence 999999999999999999987532 233578999999999999999999999988888999999999988666543322
Q ss_pred --CCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--------------------hhccccCceE
Q 014435 328 --VGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF--------------------ELTVNCNLFS 385 (424)
Q Consensus 328 --~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy--------------------~~~~~TgD~g 385 (424)
.......++|+|+++++++|+| ++++++|.|..|||+++|+.++.|| ..||+|||+|
T Consensus 1884 ~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~ 1962 (3956)
T PRK12467 1884 KDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLA 1962 (3956)
T ss_pred cccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceE
Confidence 1122356899999999999999 7899999999999999999999999 1379999999
Q ss_pred EEecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 386 YFRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 386 ~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++++||.+ | +|++|++|+|.|||++|.+||+|++|+|++
T Consensus 1963 ~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a~vv~ 2009 (3956)
T PRK12467 1963 RYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREAVVIA 2009 (3956)
T ss_pred EECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceEEEEE
Confidence 99999987 4 999999999999999999999999999974
No 91
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-52 Score=412.83 Aligned_cols=396 Identities=20% Similarity=0.255 Sum_probs=306.0
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
+++.++. ..+.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.++.+++..++
T Consensus 51 p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 130 (600)
T PRK08279 51 PDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLNTQQRGAVLAHSL 130 (600)
T ss_pred CCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCHHHHHHHH
Confidence 3444443 346799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCC-----CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEE
Q 014435 93 KDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAAL 167 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 167 (424)
+.++++++|++++....+..... ..++....... .....+..+.+..................++++++
T Consensus 131 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 204 (600)
T PRK08279 131 NLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTL------DDPEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFY 204 (600)
T ss_pred HhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccc------cccccHHHHhhhcccCCccCCCcccCCCccccEEE
Confidence 99999999999877665544321 11122111000 00111112222111111100112233457899999
Q ss_pred ecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHH
Q 014435 168 LYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALR 247 (424)
Q Consensus 168 ~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 247 (424)
+|||||||.||+|.++|.++...+.......... .+++++..+|++|.+|+...++.++..|+++++.+.+++..+++
T Consensus 205 l~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~--~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~ 282 (600)
T PRK08279 205 IYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLT--PDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWD 282 (600)
T ss_pred EEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCC--CCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHH
Confidence 9999999999999999999998887766554443 34999999999999999877788899999999999999999999
Q ss_pred HHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCC
Q 014435 248 AIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPL 327 (424)
Q Consensus 248 ~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 327 (424)
.++++++|++.++|+++..+.+..........++|.+ +|+.++++++++|.+.++...+++.||+||++..... .
T Consensus 283 ~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~-~-- 357 (600)
T PRK08279 283 DVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFIN-V-- 357 (600)
T ss_pred HHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeecc-c--
Confidence 9999999999999999999887655444445677764 4777999999999999975679999999998753322 1
Q ss_pred CCccCCCccccccC----CcEE---------EEeeCC-CCccCCCCCceeEE--EecCCcchhh----------------
Q 014435 328 VGVRRSGSAGTLVA----GVEA---------QIVSVD-TLKPLPPNQLGEIW--VRGPNVTPVF---------------- 375 (424)
Q Consensus 328 ~~~~~~~~~G~~~~----~~~~---------~i~d~~-~~~~~~~g~~Gel~--v~~~~~~~gy---------------- 375 (424)
....+++|.+.+ +..+ .+.+.+ ....++.|+.||++ +.++.++.||
T Consensus 358 --~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~ 435 (600)
T PRK08279 358 --FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFK 435 (600)
T ss_pred --CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccC
Confidence 234456776555 3322 222311 12357889999998 7788899998
Q ss_pred --hhccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 376 --ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 376 --~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||+|||+|+++++|.+ | ++++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 436 ~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~g 494 (600)
T PRK08279 436 KGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYG 494 (600)
T ss_pred CCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEE
Confidence 258999999999999987 3 999999999999999999999999999975
No 92
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.4e-52 Score=408.99 Aligned_cols=397 Identities=22% Similarity=0.314 Sum_probs=312.9
Q ss_pred CCCCcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~-~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
++.+||+||.+++.++|++|++ .|+++||+|+++++|+++++++++||+++|++++++++..+.+++.++++.++++++
T Consensus 36 ~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 115 (576)
T PRK05620 36 QEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVI 115 (576)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEE
Confidence 4679999999999999999986 799999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCC-----CCeEEEecCCCccc-cccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCC
Q 014435 101 ITVPELWDKVKDLN-----LPAVLLGSKDKVSS-SGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTT 174 (424)
Q Consensus 101 i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 174 (424)
|++++....+.... .+.++......... ...........++++++.... ...+.....++++++++||||||
T Consensus 116 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~a~i~~TSGTT 193 (576)
T PRK05620 116 VADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGRS--TVYDWPELDETTAAAICYSTGTT 193 (576)
T ss_pred EEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhcCC--CcCCCCCCCccceeEEEECCCCC
Confidence 99987666543321 12222221111100 000011223445666665322 22222345678999999999999
Q ss_pred CCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHcc
Q 014435 175 GVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYR 253 (424)
Q Consensus 175 G~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~ 253 (424)
|.||+|.++|+++............+.....+++++.+|++|.+++. ..+.++..|+++++.. .+++..+++.+++++
T Consensus 194 G~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~ 272 (576)
T PRK05620 194 GAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWG-VPLAAFMSGTPLVFPGPDLSAPTLAKIIATAM 272 (576)
T ss_pred CCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhH-HHHHHHhcCceEEecCCCCCHHHHHHHHHHhc
Confidence 99999999999986554432222122233458999999999999985 6678899999998875 479999999999999
Q ss_pred ceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC----
Q 014435 254 VTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG---- 329 (424)
Q Consensus 254 ~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~---- 329 (424)
+|+++++|+++..++.+.........++|.+++||+++++.+.++|.+.+ ++++++.||+||++..+....+...
T Consensus 273 ~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~ 351 (576)
T PRK05620 273 PRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY-GVDVVHVWGMTETSPVGTVARPPSGVSGE 351 (576)
T ss_pred CceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh-CCceeeeccccccccceeeeccCCccccc
Confidence 99999999999988765433333446899999999999999999999988 6899999999999876554332210
Q ss_pred --ccCCCccccccCCcEEEEeeCCCCccC--CCCCceeEEEecCCcchhh-----------------------------h
Q 014435 330 --VRRSGSAGTLVAGVEAQIVSVDTLKPL--PPNQLGEIWVRGPNVTPVF-----------------------------E 376 (424)
Q Consensus 330 --~~~~~~~G~~~~~~~~~i~d~~~~~~~--~~g~~Gel~v~~~~~~~gy-----------------------------~ 376 (424)
.....++|++.++++++++| + ++.+ ++++.|||+++|++++.|| +
T Consensus 352 ~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~ 429 (576)
T PRK05620 352 ARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTAD 429 (576)
T ss_pred cccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccC
Confidence 01234789999999999999 4 6655 3578999999999999888 1
Q ss_pred hccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 377 LTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 377 ~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+||+|||++++++||.+ | ++.+|++|+|.+||++|.+||.|.+|+|+|
T Consensus 430 g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v~~~~vv~ 485 (576)
T PRK05620 430 GWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEVVECAVIG 485 (576)
T ss_pred CcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCceEEEEEe
Confidence 48999999999999977 3 889999999999999999999999999985
No 93
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.6e-51 Score=404.67 Aligned_cols=406 Identities=23% Similarity=0.384 Sum_probs=315.8
Q ss_pred CCCCCC-CCCCCcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 15 LRPPLV-LPSDPSFSMFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 15 ~~~~~~-~~~~~Ty~el~~~~~~~a~~L~-~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
...++. ..+++||+||.+++.++|+.|+ +.|+++||+|+++++|+++++++++||+++|++++|++|.++.+++..++
T Consensus 40 ~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l 119 (560)
T PRK08751 40 DRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQL 119 (560)
T ss_pred CCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHH
Confidence 344433 4567999999999999999997 68999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCC----CCeEEEecCCC-cc--cc-------------ccccCCCcccchhhhhhccCCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDK-VS--SS-------------GLISRSSKIVSFHDLIELSGSVT 152 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~~~-~~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 152 (424)
++++++++++++.....+.... ...++...... .. .. ...........+.+....... .
T Consensus 120 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 198 (560)
T PRK08751 120 IDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRINGAIRFREALALGRK-H 198 (560)
T ss_pred HhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccCCCccccHHHHHhccCC-C
Confidence 9999999999887655443321 11222111000 00 00 000000111223333222111 1
Q ss_pred CCCCCCCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhh---ccCCCcEEEEecchHHHHHHHHHHHHHhh
Q 014435 153 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL---VGELDHVVLCVLPMFHVFGLSVILYDQLQ 229 (424)
Q Consensus 153 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~~l~ 229 (424)
..+.....++++++++|||||||.||+|.++|.++............. ....++.+++..|++|.+++....+..+.
T Consensus 199 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (560)
T PRK08751 199 SMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMK 278 (560)
T ss_pred CCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhh
Confidence 122234567899999999999999999999999988766554333321 11223677888999999998655566666
Q ss_pred cCceEEec-CCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeE
Q 014435 230 KGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATI 308 (424)
Q Consensus 230 ~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~ 308 (424)
.|++.++. ..+++..+++.++++++|++.++|.++..+.+.......+++++|.+++||+++++++.+.|++.+ ++.+
T Consensus 279 ~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~ 357 (560)
T PRK08751 279 IGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTL 357 (560)
T ss_pred ccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeE
Confidence 66665544 457899999999999999999999999999887655556688999999999999999999999987 6899
Q ss_pred EecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------
Q 014435 309 FQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------- 375 (424)
Q Consensus 309 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------- 375 (424)
++.||+||+++.++..... .....+++|.|.++++++++| ++++.++.|+.|||+++|+.++.||
T Consensus 358 ~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 435 (560)
T PRK08751 358 VEAYGLTETSPAACINPLT-LKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDA 435 (560)
T ss_pred EEeeccccCCCceeccccc-ccccCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCccchhhcCChhhhhhcccc
Confidence 9999999988765543321 234457899999999999999 6889999999999999999999999
Q ss_pred hhccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 376 ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 376 ~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||+|||+|+++++|.+ | ++.+|++|+|.+||++|.++|+|.+|+|+|
T Consensus 436 ~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~ 492 (560)
T PRK08751 436 DGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGVLEVAAVG 492 (560)
T ss_pred CCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCeeeeEEEe
Confidence 479999999999999877 3 899999999999999999999999999875
No 94
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=4.3e-51 Score=401.35 Aligned_cols=399 Identities=30% Similarity=0.487 Sum_probs=314.0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|++|..+.+++.++++.+++++++
T Consensus 44 ~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi 123 (541)
T TIGR03205 44 DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLI 123 (541)
T ss_pred CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEE
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecccc--hHHHhcC----CCCeEEEecCCCccccc----cccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCC
Q 014435 102 TVPEL--WDKVKDL----NLPAVLLGSKDKVSSSG----LISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 102 ~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 171 (424)
+++.. ....... ....+++.......... .........++++++.... .........++++++++|||
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TS 201 (541)
T TIGR03205 124 TSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVKGAA--APAEWPAVTPDDVALLQYTG 201 (541)
T ss_pred EeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHhcCC--CCCCCCCCCccCeEEEEECC
Confidence 98631 1111110 01112222111100000 0011122334555543222 11112234578999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhh---hhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQ---ELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRA 248 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 248 (424)
||||.||+|.++|+++........... .......+++++..|++|.+++...++.++..|+++++...+++..+++.
T Consensus 202 GTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~ 281 (541)
T TIGR03205 202 GTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRD 281 (541)
T ss_pred CCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHH
Confidence 999999999999999876543221110 11112237899999999999987778889999999999888899999999
Q ss_pred HHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC
Q 014435 249 IEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV 328 (424)
Q Consensus 249 i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~ 328 (424)
|+++++|++.++|+++..+.+........++++|.+++||+++++++.+++.+.+ +.++++.||+||++..+.......
T Consensus 282 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~ 360 (541)
T TIGR03205 282 IEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERKT-GLKLKSGWGMTETCSPGTGHPPEG 360 (541)
T ss_pred HHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHHh-CCCeecccccccCCcccccCCCCC
Confidence 9999999999999999999876544455678999999999999999999998877 689999999999887665433221
Q ss_pred CccCCCccccccCCcEEEEee-CCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce--
Q 014435 329 GVRRSGSAGTLVAGVEAQIVS-VDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-- 393 (424)
Q Consensus 329 ~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-- 393 (424)
....+++|.|++++.++|.+ .++++.++.|+.|||+++|+.++.|| ++||+|||+++++++|.+
T Consensus 361 -~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i 439 (541)
T TIGR03205 361 -PDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGYFFL 439 (541)
T ss_pred -CCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcCCceEEE
Confidence 23457899999999988864 25688999999999999999999998 468999999999999877
Q ss_pred -----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||+.+.+||.|.+++|+|
T Consensus 440 ~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~ 476 (541)
T TIGR03205 440 VDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIG 476 (541)
T ss_pred EccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 3 899999999999999999999999999874
No 95
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-51 Score=403.53 Aligned_cols=394 Identities=23% Similarity=0.319 Sum_probs=310.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.+++++++
T Consensus 37 ~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 37 IVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred ceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCC-----CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++.+....+.+.. ...++...+..... .........+.+++.... .........++++++++|||||||.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGTTG~ 191 (542)
T PRK06018 117 TDLTFVPILEKIADKLPSVERYVVLTDAAHMP---QTTLKNAVAYEEWIAEAD--GDFAWKTFDENTAAGMCYTSGTTGD 191 (542)
T ss_pred EccccHHHHHHHHhhCCCccEEEEeccccccc---ccCccccccHHHHhccCC--cccCcccCCccceeeEEecCCCCCC
Confidence 9987766554321 11222211110000 011112334454443322 1111233456789999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccce
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVT 255 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t 255 (424)
||+|.++|++..................+++++...|++|.+++. ..+.++..|+++++.. .+++..+++.++++++|
T Consensus 192 PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t 270 (542)
T PRK06018 192 PKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWG-IAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVT 270 (542)
T ss_pred CcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhH-HHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCc
Confidence 999999999743221111111112223448999999999999885 4567788999998874 57889999999999999
Q ss_pred EEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC------
Q 014435 256 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG------ 329 (424)
Q Consensus 256 ~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~------ 329 (424)
++.++|+++..+.+.......+++++|.++++|+++++++.++|++ + +.++++.||+||++.+++.......
T Consensus 271 ~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~ 348 (542)
T PRK06018 271 FTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-GVEVRHAWGMTEMSPLGTLAALKPPFSKLPG 348 (542)
T ss_pred eeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-CCCeEeeecccccCcccccccCccccccCCc
Confidence 9999999999998876555567889999999999999999999999 6 7999999999998876544221100
Q ss_pred ---ccCCCccccccCCcEEEEeeCCCCccCCCC--CceeEEEecCCcchhh----------hhccccCceEEEecCCce-
Q 014435 330 ---VRRSGSAGTLVAGVEAQIVSVDTLKPLPPN--QLGEIWVRGPNVTPVF----------ELTVNCNLFSYFRSNDHN- 393 (424)
Q Consensus 330 ---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy----------~~~~~TgD~g~~~~~g~~- 393 (424)
.....++|+|.++++++|+| ++++.++.+ ..|||+++|+.++.|| ++||+|||+++++++|.+
T Consensus 349 ~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~~g~~~ 427 (542)
T PRK06018 349 DARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDAYGYMR 427 (542)
T ss_pred hhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcCCccEE
Confidence 01235789999999999999 578877653 6899999999999999 579999999999999877
Q ss_pred ------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||..+.+||.|.+|+|+|
T Consensus 428 ~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 465 (542)
T PRK06018 428 ITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIG 465 (542)
T ss_pred EEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEe
Confidence 3 889999999999999999999999999985
No 96
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.1e-52 Score=485.49 Aligned_cols=386 Identities=20% Similarity=0.263 Sum_probs=318.5
Q ss_pred cCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLVL-PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++.. .+++||+||.++++++|+.|.++|+++|++|+++++|+++++++++||+++|++++|++|.++.+++.+++
T Consensus 2017 p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vpld~~~p~~rl~~il 2096 (5163)
T PRK12316 2017 PEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYVPLDPNYPAERLAYML 2096 (5163)
T ss_pred CCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEeecCCCCCHHHHHHHH
Confidence 45555543 45699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+++++++++++++....+........+ .... ... ..... ...+.....++++++|+||||
T Consensus 2097 ~~~~~~~vl~~~~~~~~~~~~~~~~~~-~~~~----------------~~~-~~~~~--~~~~~~~~~~~~~a~ii~TSG 2156 (5163)
T PRK12316 2097 EDSGAALLLTQRHLLERLPLPAGVARL-PLDR----------------DAE-WADYP--DTAPAVQLAGENLAYVIYTSG 2156 (5163)
T ss_pred HhcCCCEEEeChhhhhhcccccccceE-eccc----------------hhh-hhccC--ccCCCCCCCCCCeEEEEeCcc
Confidence 999999999988765443221110000 0000 000 00000 112233457899999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC--CCHHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK--FDIEMALRAIE 250 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~i~ 250 (424)
|||.||||+++|+++.+.+.......... .+++++.+.|++|..++. .++.+|..|+++++.+. +++..+.+.++
T Consensus 2157 STG~PKgV~~~h~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~ 2233 (5163)
T PRK12316 2157 STGLPKGVAVSHGALVAHCQAAGERYELS--PADCELQFMSFSFDGAHE-QWFHPLLNGARVLIRDDELWDPEQLYDEME 2233 (5163)
T ss_pred CCCCCCEeEEccHHHHHHHHHHHHhcCCC--CcceEEEecCchHHHHHH-HHHHHHhCCCEEEeCCcccCCHHHHHHHHH
Confidence 99999999999999998877766655543 349999999999988874 78999999999988763 68999999999
Q ss_pred HccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCc
Q 014435 251 KYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGV 330 (424)
Q Consensus 251 ~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~ 330 (424)
++++|++.++|+++..+.+...... ...+||.+++||+++++++.++|.+.+++.++++.||+||++..++........
T Consensus 2234 ~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~ 2312 (5163)
T PRK12316 2234 RHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQD 2312 (5163)
T ss_pred HcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeeccccc
Confidence 9999999999999999987654332 345899999999999999999999988889999999999988665543322111
Q ss_pred ---cCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--------------------hhccccCceEEE
Q 014435 331 ---RRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF--------------------ELTVNCNLFSYF 387 (424)
Q Consensus 331 ---~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy--------------------~~~~~TgD~g~~ 387 (424)
....++|+|+++++++|+| ++++++|.|++|||+|+|+.++.|| ++||+|||+|++
T Consensus 2313 ~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~ 2391 (5163)
T PRK12316 2313 PCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARY 2391 (5163)
T ss_pred ccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEE
Confidence 1235799999999999999 6889999999999999999999999 138999999999
Q ss_pred ecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 388 RSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 388 ~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||.+ | ||++|++|+|.|||.+|.+||+|++|+|++
T Consensus 2392 ~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~ 2436 (5163)
T PRK12316 2392 RADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVA 2436 (5163)
T ss_pred cCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEE
Confidence 999987 3 999999999999999999999999999874
No 97
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=2.4e-51 Score=404.75 Aligned_cols=397 Identities=19% Similarity=0.274 Sum_probs=302.9
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.+++++++
T Consensus 43 ~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (567)
T PLN02479 43 SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVM 122 (567)
T ss_pred CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcC------------CCCeEEEecCCCccc-cccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEe
Q 014435 102 TVPELWDKVKDL------------NLPAVLLGSKDKVSS-SGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALL 168 (424)
Q Consensus 102 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 168 (424)
+++++.+..... ....++......... ............+.+++..... ..........+++++++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 201 (567)
T PLN02479 123 VDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEKFLETGDP-EFAWKPPADEWQSIALG 201 (567)
T ss_pred EchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHHHHHhcccc-ccccCCCCCcccceEEE
Confidence 998765433221 111222221110000 0000011223345555443221 11111122345678899
Q ss_pred cCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHH
Q 014435 169 YSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRA 248 (424)
Q Consensus 169 ~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 248 (424)
|||||||.||+|.++|+++............. ..++++++.+|++|.+++...+...+..|.++++ ..+++..+++.
T Consensus 202 yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~ 278 (567)
T PLN02479 202 YTSGTTASPKGVVLHHRGAYLMALSNALIWGM--NEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICL-RQVTAKAIYSA 278 (567)
T ss_pred ECCCCCCCCcEEEeccHHHHHHHHHHHhhcCC--CCCCEEEEecchhhhhhHHHHHHHHhhcCceEec-cCCCHHHHHHH
Confidence 99999999999999999986654433333332 3458999999999999986555556677766654 56899999999
Q ss_pred HHHccceEEEechHHHHHHHhcccccc-CCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecC--
Q 014435 249 IEKYRVTVWWVVPPIILALAKNSLVRK-FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLEN-- 325 (424)
Q Consensus 249 i~~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~-- 325 (424)
++++++|++.++|.++..|.+...... ..++++|.++++|+++++.+.++|.+. +.++++.||+||+++.+....
T Consensus 279 l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~ 356 (567)
T PLN02479 279 IANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSEK--GFRVTHTYGLSETYGPSTVCAWK 356 (567)
T ss_pred HHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHHhc--CCceecccccccccccccceecc
Confidence 999999999999999999987654333 257899999999999999999999875 689999999999865433211
Q ss_pred C-------CCCccCCCccccccCCcE-EEEeeCCCCccCCCC--CceeEEEecCCcchhh------------hhccccCc
Q 014435 326 P-------LVGVRRSGSAGTLVAGVE-AQIVSVDTLKPLPPN--QLGEIWVRGPNVTPVF------------ELTVNCNL 383 (424)
Q Consensus 326 ~-------~~~~~~~~~~G~~~~~~~-~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy------------~~~~~TgD 383 (424)
+ ........+.|.+.++.. ++|+|++++++++.+ +.|||+++|+.++.|| ++||+|||
T Consensus 357 ~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGD 436 (567)
T PLN02479 357 PEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGD 436 (567)
T ss_pred ccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhcCCceecce
Confidence 0 000111235677788875 889987678888754 6899999999999999 57999999
Q ss_pred eEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 384 FSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 384 ~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|+++++|++ | ++.+|++|+|.+||++|.+||.|.+|+|+|
T Consensus 437 l~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 485 (567)
T PLN02479 437 LGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVA 485 (567)
T ss_pred eEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEe
Confidence 9999999977 3 889999999999999999999999999985
No 98
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3e-51 Score=399.74 Aligned_cols=393 Identities=22% Similarity=0.300 Sum_probs=308.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.++.+++..+++.++++++
T Consensus 8 ~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 8 GDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVL 87 (509)
T ss_pred CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEE
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCC-CeEEEecCCCcccc-------ccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 101 ITVPELWDKVKDLNL-PAVLLGSKDKVSSS-------GLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 101 i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+++.+....+..... ....+......... ...........+++...... +......+++++++||||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 88 IAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE-----PYDGPPVPQPQSMIYTSG 162 (509)
T ss_pred EEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccC-----ccCCCCCCCceEEEECCC
Confidence 998876665433211 11111000000000 00001112233444432211 112335689999999999
Q ss_pred CCCCcchhhhcHHHH---HHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNF---IAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 249 (424)
|||.||+|.++|... ............. ..+++++...|++|..+.. ..+.++..|+++++.+.+++..+++.+
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~l 239 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIYGL--KPGIRALLTGPLYHSAPNA-YGLRAGRLGGVLVLQPRFDPEELLQLI 239 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhcCC--CCCceEEEEeCCcccchHH-HHHHHHhhheEEEEccCCCHHHHHHHH
Confidence 999999998866543 3322222222223 3448999999999988875 445567889999988888999999999
Q ss_pred HHccceEEEechHHHHHHHhccc--cccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPL 327 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~--~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 327 (424)
+++++|++.++|+++..|+.... ....+++++|.++.||+++++++.+++.+.+ +..+++.||+||++.++.... .
T Consensus 240 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-~ 317 (509)
T PRK12406 240 ERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVTFATS-E 317 (509)
T ss_pred HHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceEecCc-c
Confidence 99999999999999999987543 2334678999999999999999999999988 589999999999987554432 2
Q ss_pred CCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcch-hh------------hhccccCceEEEecCCce-
Q 014435 328 VGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTP-VF------------ELTVNCNLFSYFRSNDHN- 393 (424)
Q Consensus 328 ~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~-gy------------~~~~~TgD~g~~~~~g~~- 393 (424)
.....++++|+|.++++++++| +++++++.|+.|||+++++.+.. +| ++||+|||+++++++|.+
T Consensus 318 ~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~ 396 (509)
T PRK12406 318 DALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDADGYLF 396 (509)
T ss_pred cccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcCCceEE
Confidence 2234567899999999999999 67899999999999999998764 66 679999999999999876
Q ss_pred ------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++++|++|+|.+||+.|.++|.|.+|+|+|
T Consensus 397 ~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 434 (509)
T PRK12406 397 LCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFG 434 (509)
T ss_pred EeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 3 899999999999999999999999999874
No 99
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-50 Score=397.14 Aligned_cols=400 Identities=27% Similarity=0.416 Sum_probs=313.5
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~-~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 99 (424)
..+.+||.||.++++++|.+|.+ .|+++|++|+++++|++++++++|||+++|++++|++|.++.+++.++++.+++++
T Consensus 45 ~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 124 (560)
T PRK08974 45 MGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKA 124 (560)
T ss_pred CCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceE
Confidence 35679999999999999999984 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccchHHHhcCC----CCeEEEecCCCccccccc--------------c--CCCcccchhhhhhccCCCCCCCCCCC
Q 014435 100 VITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLI--------------S--RSSKIVSFHDLIELSGSVTDIPDVSV 159 (424)
Q Consensus 100 ii~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (424)
++++++..+.+..+. ...+.............. . ......++.+....... ........
T Consensus 125 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 203 (560)
T PRK08974 125 IVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHKGRR-MQYVKPEL 203 (560)
T ss_pred EEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccccCCCcccHHHHhhccCC-CCCCCCCC
Confidence 999876655443321 111111100000000000 0 00011111222211110 11112234
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhh-hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE-LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 237 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~- 237 (424)
.++++++++|||||||.||+|.++|.++............ .....++.++..+|++|.+++....+..+..|+++++.
T Consensus 204 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~ 283 (560)
T PRK08974 204 VPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLIT 283 (560)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEec
Confidence 6789999999999999999999999999876543322221 12333478889999999999876677778888886665
Q ss_pred CCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccC
Q 014435 238 GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTET 317 (424)
Q Consensus 238 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~ 317 (424)
+..++..+++.++++++|++.++|+++..+.+.......+++++|.+++||+++++.+.++|++.+ +..+++.||+||+
T Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~ 362 (560)
T PRK08974 284 NPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLTEC 362 (560)
T ss_pred CccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCHHHHHHHHHHh-CCcEEeeeccccc
Confidence 356889999999999999999999999999887655556678999999999999999999999987 6999999999998
Q ss_pred CCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceE
Q 014435 318 CAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFS 385 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g 385 (424)
+..+...... .....+++|.|.++++++|+| ++++.++.|+.|||+++|+.++.+| ++||+|||++
T Consensus 363 ~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~ 440 (560)
T PRK08974 363 SPLVSVNPYD-LDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIA 440 (560)
T ss_pred CceeeccCCC-CcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEE
Confidence 8766554332 234467899999999999999 5789999999999999999999998 4789999999
Q ss_pred EEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 386 YFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 386 ~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+++++|.+ | ++++|++++|.+||++|.+||.|.+++|+|
T Consensus 441 ~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~ 487 (560)
T PRK08974 441 VMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVG 487 (560)
T ss_pred EEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 99998876 3 888999999999999999999999999874
No 100
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=6.4e-52 Score=394.73 Aligned_cols=359 Identities=32% Similarity=0.464 Sum_probs=281.3
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeE
Q 014435 20 VLPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 20 ~~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 99 (424)
..++++||+||.++++++|..|++.|+++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.+++++
T Consensus 17 ~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 96 (417)
T PF00501_consen 17 DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKV 96 (417)
T ss_dssp TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESE
T ss_pred CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccccccccccccccccccccceeE
Confidence 36677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEE----cccchHHHhcCC----CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCC-CCCCCEEEEecC
Q 014435 100 VIT----VPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVS-VKQTDAAALLYS 170 (424)
Q Consensus 100 ii~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~T 170 (424)
+++ ++.....+.... ........+.. .....+.+...... .... .. ..++++++++||
T Consensus 97 ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~i~~T 163 (417)
T PF00501_consen 97 IITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRD-----------DLPKKEALKSASLS-DEPQ-SPEDSPDDPAFILFT 163 (417)
T ss_dssp EEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHS-----------SCTTCHHHHHHHHC-HCSH-STTHTTTSEEEEEEE
T ss_pred EEEeccccccccccchhhhccccccccccccccc-----------cccccccccccccc-cccc-cCCCCccceeEeecc
Confidence 997 222222222111 11111111100 00000111110000 0000 00 056999999999
Q ss_pred CCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCC---HHHHHH
Q 014435 171 SGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD---IEMALR 247 (424)
Q Consensus 171 SGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~---~~~~~~ 247 (424)
|||||.||+|.++|+++...+.... ........ +++++.+|++|.+|+...++.++..|+++++.+... ++.+++
T Consensus 164 SGTTG~pK~v~~t~~~~~~~~~~~~-~~~~~~~~-d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~ 241 (417)
T PF00501_consen 164 SGTTGKPKGVVLTHRNLLAQARALA-LPEYFGLG-DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLLE 241 (417)
T ss_dssp SSSSSSEEEEEEEHHHHHHHHHHHH-HHHTTTTT-TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccc-cccccccC-ceEEeeccccccccccccccccccccccccccccccccccccchh
Confidence 9999999999999999998877654 11111111 599999999999999678999999999999998754 477899
Q ss_pred HHHHccceEEEechHHHHHHHhccccc----cCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceee
Q 014435 248 AIEKYRVTVWWVVPPIILALAKNSLVR----KFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISL 323 (424)
Q Consensus 248 ~i~~~~~t~~~~~p~~~~~l~~~~~~~----~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~ 323 (424)
.++++++|+++++|+++..+++..... ..+++++|.++++|+++++++.+++++.++..++++.||+||+++++..
T Consensus 242 ~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~ 321 (417)
T PF00501_consen 242 LISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATI 321 (417)
T ss_dssp HHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceecccccccceeeec
Confidence 999999999999999999998843222 3468889999999999999999999999865599999999999988875
Q ss_pred cCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------h-hccccCceEEEecC
Q 014435 324 ENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------E-LTVNCNLFSYFRSN 390 (424)
Q Consensus 324 ~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~-~~~~TgD~g~~~~~ 390 (424)
..........+++|.|+++++++|+|+++++++++|+.|||+++|+.++.|| + +||+|||+|+++++
T Consensus 322 ~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~ 401 (417)
T PF00501_consen 322 RPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDED 401 (417)
T ss_dssp EETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCccceeeeccccccccccccccceecceEEEECCC
Confidence 5322223467789999999999999977799999999999999999999999 2 69999999999999
Q ss_pred Cce
Q 014435 391 DHN 393 (424)
Q Consensus 391 g~~ 393 (424)
|.+
T Consensus 402 G~~ 404 (417)
T PF00501_consen 402 GYL 404 (417)
T ss_dssp SEE
T ss_pred CeE
Confidence 987
No 101
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=8.4e-51 Score=431.37 Aligned_cols=382 Identities=20% Similarity=0.288 Sum_probs=307.4
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++++||+||.++++++|+.|++ |+++||+|+++++|+++++++++||+++|++++|+|+..+.+++.++++++++++++
T Consensus 656 ~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi 734 (1140)
T PRK06814 656 NGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVL 734 (1140)
T ss_pred CCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEE
Confidence 4679999999999999999976 999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHh------cCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 102 TVPELWDKVK------DLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 102 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
++++...... .......++..++.. ........+.+...... +..+.....++|+++++|||||||
T Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG 806 (1140)
T PRK06814 735 TSRAFIEKARLGPLIEALEFGIRIIYLEDVR------AQIGLADKIKGLLAGRF--PLVYFCNRDPDDPAVILFTSGSEG 806 (1140)
T ss_pred ecHHHHhhhcchhHHHHhccCceEEEehHhh------ccCChHHHHHHHhhccC--CccccCCCCCCCcEEEEECCCccC
Confidence 9876543221 111111111111000 00000011111111111 111111346799999999999999
Q ss_pred CcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccc
Q 014435 176 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRV 254 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~ 254 (424)
.||+|.++|+++............. ..+|++++.+|++|.+++...++.++..|+++++.+. .+...+.+.++++++
T Consensus 807 ~PKgv~~sh~~~~~~~~~~~~~~~~--~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~ 884 (1140)
T PRK06814 807 TPKGVVLSHRNLLANRAQVAARIDF--SPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNA 884 (1140)
T ss_pred CCcEEEecHHHHHHHHHHHHHhhCC--CCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCC
Confidence 9999999999998877766555544 3449999999999999997678889999999998764 567788899999999
Q ss_pred eEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCC
Q 014435 255 TVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSG 334 (424)
Q Consensus 255 t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 334 (424)
|++.++|+++..+.+.. ...+++++|.+++||+++++++.+.+.+.+ ++++++.||+||++..+....+. ..+.+
T Consensus 885 t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~--~~~~~ 959 (1140)
T PRK06814 885 TILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGYGVTETAPVIALNTPM--HNKAG 959 (1140)
T ss_pred EEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEeccccccccceEEecCCC--CCCCC
Confidence 99999999999887653 345678999999999999999999999988 69999999999998776654433 34567
Q ss_pred ccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e
Q 014435 335 SAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D 394 (424)
Q Consensus 335 ~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d 394 (424)
++|+|.+++++++.+. .+ .|+.|||+++|+.++.|| ++||+|||+|++|+||.+ |
T Consensus 960 ~vG~p~~g~~~~~~~~-~~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d 1034 (1140)
T PRK06814 960 TVGRLLPGIEYRLEPV-PG----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKR 1034 (1140)
T ss_pred cCCccCCCCeEEEeec-CC----CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccC
Confidence 9999999999999873 32 367899999999999999 469999999999999987 3
Q ss_pred -eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 395 -FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 395 -i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++++|++|+|.|||+++.+||.|.+++|++
T Consensus 1035 ~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~ 1065 (1140)
T PRK06814 1035 FAKIAGEMISLAAVEELAAELWPDALHAAVS 1065 (1140)
T ss_pred eeeeCCEEECHHHHHHHHHhcCCcccEEEEE
Confidence 999999999999999999999999999874
No 102
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.1e-50 Score=395.82 Aligned_cols=375 Identities=19% Similarity=0.259 Sum_probs=309.6
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|..|.+.|+++|++|+++++|+.+++++++||+++|++++|+++.++.+++..+++..++++++
T Consensus 25 ~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (503)
T PRK04813 25 GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLII 104 (503)
T ss_pred CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEE
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccC-CCCCCCCCCCCCCCEEEEecCCCCCCCcchh
Q 014435 102 TVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG-SVTDIPDVSVKQTDAAALLYSSGTTGVSKGV 180 (424)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 180 (424)
++++..... ... .....+++..... ...........++++++++|||||||.||+|
T Consensus 105 ~~~~~~~~~----~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v 161 (503)
T PRK04813 105 ATEELPLEI----LGI-------------------PVITLDELKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGV 161 (503)
T ss_pred ecccccccc----cCC-------------------cEEehHHhhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEE
Confidence 987652100 000 0011111111100 0011112334678899999999999999999
Q ss_pred hhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHHHHHccceEE
Q 014435 181 ILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~ 257 (424)
.++|+++............. ...++++...|++|..++. .++.++..|+++++.+. .++..+++.++++++|++
T Consensus 162 ~~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~ 238 (503)
T PRK04813 162 QISHDNLVSFTNWMLEDFAL--PEGPQFLNQAPYSFDLSVM-DLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVW 238 (503)
T ss_pred EeehHHHHHHHHHHHHHcCC--CcCceeeecCCcchhHhHH-HHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEE
Confidence 99999998877665555433 3448999999999999884 67789999999998865 588999999999999999
Q ss_pred EechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC---CccCCC
Q 014435 258 WVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV---GVRRSG 334 (424)
Q Consensus 258 ~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~---~~~~~~ 334 (424)
..+|+++..+..........++++|.++++|+++++.+.+++.+.+++..+++.||+||++..++...... ......
T Consensus 239 ~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 318 (503)
T PRK04813 239 VSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRL 318 (503)
T ss_pred EeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCC
Confidence 99999998876655445556889999999999999999999999998899999999999876544322111 124455
Q ss_pred ccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh----------------hhccccCceEEEecCCce-----
Q 014435 335 SAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF----------------ELTVNCNLFSYFRSNDHN----- 393 (424)
Q Consensus 335 ~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy----------------~~~~~TgD~g~~~~~g~~----- 393 (424)
++|++.++++++|+| +++.+++.|+.|||+++|+.++.|| .+||+|||+|++ .+|.+
T Consensus 319 ~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR 396 (503)
T PRK04813 319 PIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGR 396 (503)
T ss_pred cccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEecc
Confidence 799999999999999 7899999999999999999999998 139999999999 88877
Q ss_pred --e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 --D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 --d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||+.+.++|+|.+++|+|
T Consensus 397 ~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 430 (503)
T PRK04813 397 IDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVP 430 (503)
T ss_pred ccceEEECcEEeCHHHHHHHHHhCCCcceEEEEE
Confidence 3 899999999999999999999999999974
No 103
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-50 Score=393.77 Aligned_cols=384 Identities=26% Similarity=0.347 Sum_probs=309.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+.+||.||.+.++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++..+++++
T Consensus 8 ~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 8 SGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred CCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCC------CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCC
Q 014435 101 ITVPELWDKVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTT 174 (424)
Q Consensus 101 i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 174 (424)
++++.....+.... .+.+.+... .......+++...... .......++.++++||||||
T Consensus 88 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~i~~TSGtT 152 (502)
T PRK08276 88 IVSAALADTAAELAAELPAGVPLLLVVAG----------PVPGFRSYEEALAAQP-----DTPIADETAGADMLYSSGTT 152 (502)
T ss_pred EEccchhhHHHHHhhhccccccEEEEeCC----------CCCccccHHHHHhcCC-----CCCCCCCCcceEEEECCCCC
Confidence 99987766554331 122222111 0111223333322111 11123456789999999999
Q ss_pred CCcchhhhcHHHHHHHHH--HHHh--hhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHH
Q 014435 175 GVSKGVILTHKNFIAASL--MISA--HQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIE 250 (424)
Q Consensus 175 G~pK~v~~t~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~ 250 (424)
|.||+|.++|.+...... .... ........++++++..|++|.+++. ..+.++..|+++++.+.+++..+++.++
T Consensus 153 G~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~i~ 231 (502)
T PRK08276 153 GRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLR-FGMSALALGGTVVVMEKFDAEEALALIE 231 (502)
T ss_pred CCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHH-HHHHHHhccceEEEcCCCCHHHHHHHHH
Confidence 999999988766443211 1101 1111112458899999999999985 5557899999999998899999999999
Q ss_pred HccceEEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC
Q 014435 251 KYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV 328 (424)
Q Consensus 251 ~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~ 328 (424)
++++|++.++|+++..+++.... ...+++++|.++++|+++++++.+++.+.+ +..+++.||+||+++++......
T Consensus 232 ~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~- 309 (502)
T PRK08276 232 RYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITSED- 309 (502)
T ss_pred HhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecCcc-
Confidence 99999999999999999876542 234678999999999999999999999988 58899999999998755543322
Q ss_pred CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce--
Q 014435 329 GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-- 393 (424)
Q Consensus 329 ~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-- 393 (424)
.....+++|+|+ ++.++|+| +++.+++.|+.|||+++|+.++.|| ++||+|||+++++++|.+
T Consensus 310 ~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~ 387 (502)
T PRK08276 310 WLAHPGSVGKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYL 387 (502)
T ss_pred ccccCCCcceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEE
Confidence 134557899999 88999999 6789999999999999999999999 389999999999999876
Q ss_pred ----e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ----D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ----d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|++.+||.+|.++|+|.+|+|++
T Consensus 388 ~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~ 424 (502)
T PRK08276 388 TDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFG 424 (502)
T ss_pred eccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEe
Confidence 3 889999999999999999999999999874
No 104
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-51 Score=405.26 Aligned_cols=381 Identities=21% Similarity=0.284 Sum_probs=300.9
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCC-------HHHHHHHHHh
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT-------VSELSKQVKD 94 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~-------~~~i~~~l~~ 94 (424)
++.+||.||.+++.++|.+|+++|+++||+|+++++|+++++++++||+++|++++|+++..+ .+++.++++.
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 467999999999999999999999999999999999999999999999999999999986433 6899999999
Q ss_pred cCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCC
Q 014435 95 SNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTT 174 (424)
Q Consensus 95 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 174 (424)
+++++++++++....+........ ......+.++..... .........++++++++||||||
T Consensus 127 ~~~~~il~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTT 188 (579)
T PRK09192 127 AQPAAIITPDELLPWVNEATHGNP----------------LLHVLSHAWFKALPE--ADVALPRPTPDDIAYLQYSSGST 188 (579)
T ss_pred cCCCEEEeChHHHHHHHHhhcccc----------------ccceeehhhhcccCC--CccccCCCCCCCeEEEEecCCCC
Confidence 999999999877665554321000 000111222221111 11112234578999999999999
Q ss_pred CCcchhhhcHHHHHHHHHHHHh-hhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CCHHHHHHHH
Q 014435 175 GVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAI 249 (424)
Q Consensus 175 G~pK~v~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i 249 (424)
|.||+|.++|+++......... .... ...++++..+|++|.+|+...++.++..|+++++.+. .++..+++.+
T Consensus 189 G~PKgv~~sh~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i 266 (579)
T PRK09192 189 RFPRGVIITHRALMANLRAISHDGLKV--RPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLI 266 (579)
T ss_pred CCCceEEeeHHHHHHHHHHHHhhcccC--CCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHH
Confidence 9999999999999887765554 3333 3348999999999999997677788899999876652 3688999999
Q ss_pred HHccceEEEechHHHHHHHhccc---cccCCCCCeeEEEecCCCCCHHHHHHHHHhCCC-----CeEEecccCccCCCce
Q 014435 250 EKYRVTVWWVVPPIILALAKNSL---VRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG-----ATIFQGYGMTETCAPI 321 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~---~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~yG~tE~~~~~ 321 (424)
.++++++++..|..+..+..... ....+++++|.+++||+++++.+.+++.+.++. ..+++.||+||+++.+
T Consensus 267 ~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~ 346 (579)
T PRK09192 267 SRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAV 346 (579)
T ss_pred HhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEE
Confidence 99999988776665555443221 123467899999999999999999999887631 3589999999987655
Q ss_pred eecCCCCC--------------------------ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh
Q 014435 322 SLENPLVG--------------------------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF 375 (424)
Q Consensus 322 ~~~~~~~~--------------------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy 375 (424)
+....... .....++|+|.|+++++|+| ++++.++.|+.|||+++|+.++.||
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~g~~Gel~i~g~~~~~gY 425 (579)
T PRK09192 347 SFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPERVVGHICVRGPSLMSGY 425 (579)
T ss_pred eccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCCCCEEEEEecCCchhhhh
Confidence 54322110 01135789999999999999 6788999999999999999999999
Q ss_pred ------------hhccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcc--cceecC
Q 014435 376 ------------ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEIL--DAVVIP 424 (424)
Q Consensus 376 ------------~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~--~a~v~g 424 (424)
++||+|||+|++ .+|++ | ++++|++|+|.|||++|.+||+|. +|+|+|
T Consensus 426 ~~~~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~ 495 (579)
T PRK09192 426 FRDEESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAFS 495 (579)
T ss_pred cCCccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHHhcCCccCCcEEEEE
Confidence 579999999999 88877 3 999999999999999999999998 788764
No 105
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=4.2e-51 Score=471.73 Aligned_cols=383 Identities=21% Similarity=0.292 Sum_probs=319.1
Q ss_pred cCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLVL-PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++.. .+++||+||.++++++|++|+++|+++|++|+++++++++++++++|++++|++++|++|.++.+++.+++
T Consensus 1145 p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~vpld~~~p~~rl~~il 1224 (4334)
T PRK05691 1145 PERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAYVPLDPDYPAERLAYML 1224 (4334)
T ss_pred CCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCcCChHHHHHHHH
Confidence 45555543 45699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
++++++++|++++....+...... ..+... +...... ....+.....++++++++||||
T Consensus 1225 ~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~-------------------~~~~~~~-~~~~~~~~~~~~~~a~ii~TSG 1283 (4334)
T PRK05691 1225 ADSGVELLLTQSHLLERLPQAEGV-SAIALD-------------------SLHLDSW-PSQAPGLHLHGDNLAYVIYTSG 1283 (4334)
T ss_pred HhcCCCEEEecchhhhhcccccCc-eEEeec-------------------ccccccc-CCCCCCCCCCCCCeEEEEEcCC
Confidence 999999999998765544332110 011000 0000000 0111222345789999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i 249 (424)
|||.||||.++|+++.............. .+++++...|++|..++. .++.+|..|+++++.+. .++..+.+.+
T Consensus 1284 STG~PKgV~~~h~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~fd~s~~-~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i 1360 (4334)
T PRK05691 1284 STGQPKGVGNTHAALAERLQWMQATYALD--DSDVLMQKAPISFDVSVW-ECFWPLITGCRLVLAGPGEHRDPQRIAELV 1360 (4334)
T ss_pred CCCCCceeEeecHHHHHHHHHHHHhcCCC--CCCEEEEeCCccHHHHHH-HHHHHHhCCCEEEEcCccccCCHHHHHHHH
Confidence 99999999999999998877665555443 349999999999988885 78899999999999853 6899999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++++|++.++|+++..+.+... ...+++||.+++||+++++++.++|.+.+++++++|.||+||++..++.......
T Consensus 1361 ~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~ 1438 (4334)
T PRK05691 1361 QQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAE 1438 (4334)
T ss_pred HHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccc
Confidence 99999999999999999986543 2357899999999999999999999999988999999999998866554322222
Q ss_pred ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--------------------hhccccCceEEEec
Q 014435 330 VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF--------------------ELTVNCNLFSYFRS 389 (424)
Q Consensus 330 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy--------------------~~~~~TgD~g~~~~ 389 (424)
.....++|+|+++++++|+| ++++++|.|+.|||+|+|+.++.|| ..||+|||+|++++
T Consensus 1439 ~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~ 1517 (4334)
T PRK05691 1439 DGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA 1517 (4334)
T ss_pred cCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC
Confidence 34567899999999999999 6899999999999999999999999 13899999999999
Q ss_pred CCce------e--eEeeeeeeChhhHHHHHhcCCCcccceec
Q 014435 390 NDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 390 ~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~ 423 (424)
||.+ | ||++|++|+|.|||++|.+||+|.+|+|+
T Consensus 1518 dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~ 1559 (4334)
T PRK05691 1518 DGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVL 1559 (4334)
T ss_pred CCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEE
Confidence 9987 4 99999999999999999999999999987
No 106
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=4.1e-51 Score=471.82 Aligned_cols=390 Identities=16% Similarity=0.207 Sum_probs=319.6
Q ss_pred ecCCCCCCCC-CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 13 RSLRPPLVLP-SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 13 ~~~~~~~~~~-~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
.++..|+..+ .++||+||.++++++|+.|.+.|+++|++|+++++++++++++++|++++|++++|++|.++.+.+.++
T Consensus 3733 ~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~i 3812 (4334)
T PRK05691 3733 HPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRI 3812 (4334)
T ss_pred CCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHH
Confidence 3566666544 459999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCC
Q 014435 92 VKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 92 l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 171 (424)
++.++++++|++++.......+....... ....+..+++....... ...+.....+++.++++|||
T Consensus 3813 l~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ayvi~TS 3878 (4334)
T PRK05691 3813 IELSRTPVLVCSAACREQARALLDELGCA-------------NRPRLLVWEEVQAGEVA-SHNPGIYSGPDNLAYVIYTS 3878 (4334)
T ss_pred HHhcCCCEEEecCcccchhhhhhcccccc-------------cccceeeeccccccccc-ccCCCCCCCCCceEEEEECC
Confidence 99999999999987654332221110000 00000011111110100 11222345689999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRA 248 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~ 248 (424)
||||.||||+++|+++.+............ ..++++...++++..+++ .++.++..|+++++++. .++..+.+.
T Consensus 3879 GSTG~PKGV~~~h~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~fd~s~~-~~~~~l~~G~~l~i~~~~~~~~~~~l~~~ 3955 (4334)
T PRK05691 3879 GSTGLPKGVMVEQRGMLNNQLSKVPYLALS--EADVIAQTASQSFDISVW-QFLAAPLFGARVEIVPNAIAHDPQGLLAH 3955 (4334)
T ss_pred CCCCCCCEEEeehHHHHHHHHHHHHhcCCC--ccceEEEecCCchhHHHH-HHHHHHhCCCEEEEcCccccCCHHHHHHH
Confidence 999999999999999999877766655543 349999999999999885 78899999999998864 578999999
Q ss_pred HHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC
Q 014435 249 IEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV 328 (424)
Q Consensus 249 i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~ 328 (424)
++++++|++.++|+++..++... ...+++||.+++||+++++++.++|.+.+++++++|.||+||++..++......
T Consensus 3956 ~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~ 4032 (4334)
T PRK05691 3956 VQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDL 4032 (4334)
T ss_pred HHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEccc
Confidence 99999999999999999887543 224689999999999999999999999888999999999999887665433221
Q ss_pred C--ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--------------------hhccccCceEE
Q 014435 329 G--VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF--------------------ELTVNCNLFSY 386 (424)
Q Consensus 329 ~--~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy--------------------~~~~~TgD~g~ 386 (424)
. .....++|+|+++++++|+| +.++++|.|.+|||+|+|+.++.|| ++||+|||+++
T Consensus 4033 ~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~ 4111 (4334)
T PRK05691 4033 ASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLAR 4111 (4334)
T ss_pred ccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCccee
Confidence 1 22345799999999999999 7899999999999999999999999 25799999999
Q ss_pred EecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceec
Q 014435 387 FRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 387 ~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~ 423 (424)
+++||.+ | +|++|++|.+.|||++|.++|+|++|+|+
T Consensus 4112 ~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~ 4156 (4334)
T PRK05691 4112 RRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVA 4156 (4334)
T ss_pred ecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEE
Confidence 9999987 4 99999999999999999999999999885
No 107
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-50 Score=416.89 Aligned_cols=397 Identities=14% Similarity=0.145 Sum_probs=296.2
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. ..+.+||+||.++++++|+.|++.|+++||+|+|+++|+++++++++||+++|++++|++|. .++.+++
T Consensus 461 pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il 537 (994)
T PRK07868 461 PKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD---TDLAAAV 537 (994)
T ss_pred CCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHH
Confidence 3444443 34579999999999999999999999999999999999999999999999999999999985 6789999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCC-CCCCCCCCCCEEEEecCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD-IPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TS 171 (424)
+.++++++|++++....+.....+.+........ .. ..........+++.......... .......++|+++|+||
T Consensus 538 ~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT- 614 (994)
T PRK07868 538 RLGGVTEIITDPTNLEAARQLPGRVLVLGGGESR-DL-DLPDDADVIDMEKIDPDAVELPGWYRPNPGLARDLAFIAFS- 614 (994)
T ss_pred hccCCeEEEEChHHHHHHHhcCceEEEecCCccc-cc-cCCcchhhhhhhhcCcccccCCcccCCCCCCCCccEEEEEe-
Confidence 9999999999987776655443333222111000 00 00000011111111110000000 01112236899999998
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEK 251 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~ 251 (424)
||||.||++.++|.+.............+ ..++++++.+|++|.+++...++..+..|+++++.+.+++..+++.|++
T Consensus 615 gStgtpKpk~vt~~~~~~~~~~~~~~~~l--~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~ 692 (994)
T PRK07868 615 TAGGELVAKQITNYRWALSAFGTASAAAL--DRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQ 692 (994)
T ss_pred CCCCCcCcEEEehHHHHHHHHhhhhhcCC--CCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHH
Confidence 57777777777776655443332222223 3459999999999999997667777888888888888999999999999
Q ss_pred ccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCcc
Q 014435 252 YRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVR 331 (424)
Q Consensus 252 ~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~ 331 (424)
+++|+++++|+++..|++.......+++++|.++ |+.+++++.+++.+.++++++++.||+||++.... .. . ..
T Consensus 693 ~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~-~~-~--~~ 766 (994)
T PRK07868 693 YGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLA-NV-S--GA 766 (994)
T ss_pred hCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeeeeccccccccc-cc-C--CC
Confidence 9999999999999999886544445678899876 33499999999999997789999999999765433 22 1 24
Q ss_pred CCCccccccCCc-EEEEe--eC--------CCC--ccCCCCCceeEEEecCCc-------chhh----hhccccCceEEE
Q 014435 332 RSGSAGTLVAGV-EAQIV--SV--------DTL--KPLPPNQLGEIWVRGPNV-------TPVF----ELTVNCNLFSYF 387 (424)
Q Consensus 332 ~~~~~G~~~~~~-~~~i~--d~--------~~~--~~~~~g~~Gel~v~~~~~-------~~gy----~~~~~TgD~g~~ 387 (424)
+.+++|+|++++ +++|. |+ ++| +.++.|+.|||+++++.. ..+| ++||+|||+|++
T Consensus 767 ~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~ 846 (994)
T PRK07868 767 KIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRR 846 (994)
T ss_pred CCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEE
Confidence 567999999997 66664 11 345 567899999999999753 2222 689999999999
Q ss_pred ecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 388 RSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 388 ~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|+||++ | |+++|++|+|.|||++|.+||.|.+|+|+|
T Consensus 847 d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg 891 (994)
T PRK07868 847 DDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYG 891 (994)
T ss_pred cCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEe
Confidence 999988 3 999899999999999999999999999985
No 108
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.4e-50 Score=392.99 Aligned_cols=361 Identities=17% Similarity=0.175 Sum_probs=273.3
Q ss_pred CCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccch------HHHhcC----CCCeEEEecCCC
Q 014435 56 APNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW------DKVKDL----NLPAVLLGSKDK 125 (424)
Q Consensus 56 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~------~~~~~~----~~~~~~~~~~~~ 125 (424)
+||++++++++|||+++|++++|+++.++.+++.++++.++++++|+++... ..+... ....++......
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 5899999999999999999999999999999999999999999999986431 111111 111121111100
Q ss_pred ccccccccCCCcccchhhhhhccCCC-----CCCCCCCCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhh
Q 014435 126 VSSSGLISRSSKIVSFHDLIELSGSV-----TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL 200 (424)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~ 200 (424)
.. . .........+++++...... .........++|+++|+|||||||.||+|.++|+++.............
T Consensus 81 ~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~ 157 (499)
T PLN03051 81 PV--A-VPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDI 157 (499)
T ss_pred cc--C-CccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCC
Confidence 00 0 00001122445544211100 0111112356899999999999999999999999987654433333233
Q ss_pred ccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEEechHHHHHHHhccc--cccCC
Q 014435 201 VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFD 277 (424)
Q Consensus 201 ~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~~~ 277 (424)
..++++++.+|++|.+++. .++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|.+... ....+
T Consensus 158 --~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~ 234 (499)
T PLN03051 158 --QPGDVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLD 234 (499)
T ss_pred --CCCCEEEEccCcceeeehH-HHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCC
Confidence 3448999999999999984 67888999999998864 788999999999999999999999999887643 33456
Q ss_pred CCCeeEEEecCCCCCHHHHHHHHHhCC-CCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccC
Q 014435 278 ISSLKLVGSGAAPLGKELMEDCQKNIP-GATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPL 356 (424)
Q Consensus 278 ~~~lr~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~ 356 (424)
+++||.+++||+++++++.+++++.++ ++.+++.||+||+++......... ....+++|+|.++++++|+| ++++++
T Consensus 235 ~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~ivd-~~g~~~ 312 (499)
T PLN03051 235 WSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQ-PQAPGAFSTASLGTRFVLLN-DNGVPY 312 (499)
T ss_pred chhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccC-CCCCccccCCCCCceEEEEC-CCCCCC
Confidence 789999999999999999988777331 478999999999865433322211 23467899999999999999 689999
Q ss_pred CCC--CceeEEEecCCc--chhh----------hh----------ccccCceEEEecCCce-------e-eEeeeeeeCh
Q 014435 357 PPN--QLGEIWVRGPNV--TPVF----------EL----------TVNCNLFSYFRSNDHN-------D-FFCKLFQVAP 404 (424)
Q Consensus 357 ~~g--~~Gel~v~~~~~--~~gy----------~~----------~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~ 404 (424)
+.| +.|||+++|+.+ +.|| ++ ||+|||+|++|+||++ | |+++|++|+|
T Consensus 313 ~~g~~~~Gel~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p 392 (499)
T PLN03051 313 PDDQPCVGEVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSS 392 (499)
T ss_pred CCCCCcceEEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCH
Confidence 988 589999999976 3565 23 5899999999999988 3 9999999999
Q ss_pred hhHHHHHhc-CCCcccceecC
Q 014435 405 AELEGLLVS-HPEILDAVVIP 424 (424)
Q Consensus 405 ~~iE~~l~~-~p~V~~a~v~g 424 (424)
.|||++|.+ ||+|.||+|+|
T Consensus 393 ~EIE~~l~~~~p~V~~aavvg 413 (499)
T PLN03051 393 VEIERACDRAVAGIAETAAVG 413 (499)
T ss_pred HHHHHHHHhcCCCcceEEEEE
Confidence 999999986 99999999985
No 109
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=8.4e-50 Score=382.43 Aligned_cols=355 Identities=26% Similarity=0.356 Sum_probs=292.7
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 26 SFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 26 Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..++++.+++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred chHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhhhcHH
Q 014435 106 LWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHK 185 (424)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~ 185 (424)
..... +. ...+..+...... ..........+++++++|||||||.||+|.++|+
T Consensus 81 ~~~~~-------~~------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~ 134 (436)
T TIGR01923 81 LEEKD-------FQ------------------ADSLDRIEAAGRY-ETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFR 134 (436)
T ss_pred ccccc-------ee------------------ecchHhhhhcccc-cccccccCCcCceEEEEeCCCCCCCCcEEEEehH
Confidence 42110 00 0001111111110 1111233456889999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEechHHHH
Q 014435 186 NFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIIL 265 (424)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~ 265 (424)
++...+......... ..+++++..+|++|.+++. .++.++..|+++++.+.+ ..+++.++++++|++.++|+++.
T Consensus 135 ~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~ 209 (436)
T TIGR01923 135 NHYASAVGSKENLGF--TEDDNWLLSLPLYHISGLS-ILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLN 209 (436)
T ss_pred HHHHHHHHHHhhcCC--CCCceEEEccCcHhHHHHH-HHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHH
Confidence 998887766655544 3448999999999999985 678999999999998765 38999999999999999999999
Q ss_pred HHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEE
Q 014435 266 ALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEA 345 (424)
Q Consensus 266 ~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 345 (424)
.+.+.... .+++|.++++|+++++++.+++++. ++.+++.||+||++...+.........+ .++|.|++++++
T Consensus 210 ~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~-~~~G~~~~~~~~ 282 (436)
T TIGR01923 210 RLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHAR-PDVGRPLAGREI 282 (436)
T ss_pred HHHhCcCC----CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccccc-cCCCccCCCcEE
Confidence 99876532 2689999999999999999998775 7999999999999876554433322222 248999999999
Q ss_pred EEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-------e-eEeeeeeeChh
Q 014435 346 QIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPA 405 (424)
Q Consensus 346 ~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~ 405 (424)
++.+.+. ++.|||+++|+.++.|| ++||+|||+++++++|.+ | ++++|++|++.
T Consensus 283 ~i~~~~~------~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~ 356 (436)
T TIGR01923 283 KIKVDNK------EGHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPE 356 (436)
T ss_pred EEEeCCC------CCceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHH
Confidence 9944222 37799999999999998 578999999999999877 3 89999999999
Q ss_pred hHHHHHhcCCCcccceecC
Q 014435 406 ELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 406 ~iE~~l~~~p~V~~a~v~g 424 (424)
+||++|.++|.|.+++|++
T Consensus 357 ~iE~~l~~~~~v~~~~v~~ 375 (436)
T TIGR01923 357 EIETVLYQHPGIQEAVVVP 375 (436)
T ss_pred HHHHHHHhCCCeeEEEEeC
Confidence 9999999999999999975
No 110
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.4e-50 Score=394.68 Aligned_cols=378 Identities=21% Similarity=0.283 Sum_probs=301.0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHH-------HHHHHHh
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSE-------LSKQVKD 94 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~-------i~~~l~~ 94 (424)
++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.++ +..+++.
T Consensus 27 ~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (545)
T PRK07768 27 PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGM 106 (545)
T ss_pred ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHh
Confidence 567999999999999999999999999999999999999999999999999999999998877544 4556788
Q ss_pred cCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCC
Q 014435 95 SNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTT 174 (424)
Q Consensus 95 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 174 (424)
++++.+++++........+... ......++++..... .......++++++++||||||
T Consensus 107 ~~~~~v~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~~~~----~~~~~~~~~~~a~i~~TSGtT 164 (545)
T PRK07768 107 IGAKAVVVGEPFLAAAPVLEEK------------------GIRVLTVADLLAADP----IDPVETGEDDLALMQLTSGST 164 (545)
T ss_pred CCCCEEEecchhhhhhhhhccc------------------CCceeehhhhcccCC----CCcCCCCCCCEEEEEeCCCCC
Confidence 8999999987655433322110 011223333332211 122244579999999999999
Q ss_pred CCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CCHHHHHHHHH
Q 014435 175 GVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIE 250 (424)
Q Consensus 175 G~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~ 250 (424)
|.||+|+++|+++.............. ...+++++.+|++|..++...++.++..|+++++.++ .++..+.+.++
T Consensus 165 G~PKgv~~s~~~~~~~~~~~~~~~~~~-~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~ 243 (545)
T PRK07768 165 GSPKAVQITHGNLYANAEAMFVAAEFD-VETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELIS 243 (545)
T ss_pred CCCceEEEcHHHHHHHHHHHHHhcCCC-CCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHH
Confidence 999999999999988776655544432 2237899999999999997667788999999988754 26788899999
Q ss_pred HccceEEEechHHHHHHHhcc----ccccCCCCCeeEEEecCCCCCHHHHHHHHHh---CC--CCeEEecccCccCCCce
Q 014435 251 KYRVTVWWVVPPIILALAKNS----LVRKFDISSLKLVGSGAAPLGKELMEDCQKN---IP--GATIFQGYGMTETCAPI 321 (424)
Q Consensus 251 ~~~~t~~~~~p~~~~~l~~~~----~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~---~~--~~~~~~~yG~tE~~~~~ 321 (424)
+++++++..+|.++..+.... .....+++++|.++++|+++++.+.+++.+. ++ ...+++.||+||++..+
T Consensus 244 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~ 323 (545)
T PRK07768 244 KYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAV 323 (545)
T ss_pred HhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEE
Confidence 999999988887776655422 1123567899999999999999999998874 32 23599999999988655
Q ss_pred eecCCCC------------------------CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--
Q 014435 322 SLENPLV------------------------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-- 375 (424)
Q Consensus 322 ~~~~~~~------------------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-- 375 (424)
....... .....+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~ 402 (545)
T PRK07768 324 SFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGVGVIELRGESVTPGYLT 402 (545)
T ss_pred EccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCCEEEEEEccCcccccccC
Confidence 4332210 012346899999999999999 7889999999999999999999998
Q ss_pred ----------hhccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceec
Q 014435 376 ----------ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 376 ----------~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~ 423 (424)
++||+|||+++++++|.+ | ++.+|++|+|.+||+.|.+||+|.+++|+
T Consensus 403 ~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv 468 (545)
T PRK07768 403 MDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRPGNAV 468 (545)
T ss_pred CCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCcccccceEE
Confidence 569999999999999877 3 89999999999999999999999998765
No 111
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-49 Score=386.64 Aligned_cols=382 Identities=24% Similarity=0.299 Sum_probs=302.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.|||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.++.+++.+++++++++.++
T Consensus 22 ~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li 101 (511)
T PRK13391 22 GEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALI 101 (511)
T ss_pred CCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEE
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCC-----CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++.+....+..... ...+....+ ........+++...... .......++.++++|||||||.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~il~TSGtTG~ 168 (511)
T PRK13391 102 TSAAKLDVARALLKQCPGVRHRLVLDGD--------GELEGFVGYAEAVAGLP-----ATPIADESLGTDMLYSSGTTGR 168 (511)
T ss_pred EchhhHHHHHHHHhcCCCceEEEEecCC--------CCCcccccHHHHhcCCC-----CCCCCCcccccEEEECCCCCCC
Confidence 99876554433221 111111110 00111222232222111 0111234567899999999999
Q ss_pred cchhhh--cHHHHHHHH---HHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHH
Q 014435 177 SKGVIL--THKNFIAAS---LMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEK 251 (424)
Q Consensus 177 pK~v~~--t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~ 251 (424)
||+|.+ +|.+..... ........ ...++++++.+|++|.+++. ..+.++..|+++++.+.+++..+++.+++
T Consensus 169 PKgv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 245 (511)
T PRK13391 169 PKGIKRPLPEQPPDTPLPLTAFLQRLWG--FRSDMVYLSPAPLYHSAPQR-AVMLVIRLGGTVIVMEHFDAEQYLALIEE 245 (511)
T ss_pred CCEEEEccccchhhhhhHHHHHHHHhcC--CCCCCeEEEcCCHHHHHHHH-HHHHHHHcCceEEECCCCCHHHHHHHHHH
Confidence 999985 455543322 11112222 23448999999999999885 66778889999999988999999999999
Q ss_pred ccceEEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 252 YRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 252 ~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++|++.++|+++..+.+.... ...+++++|.+++||+++++++.+++++.+ +..+++.||+||+++++...... .
T Consensus 246 ~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~~~-~ 323 (511)
T PRK13391 246 YGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLGFTACDSEE-W 323 (511)
T ss_pred hCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccccceEEecCcc-c
Confidence 9999999999999988765332 234578999999999999999999999988 58899999999998765543222 1
Q ss_pred ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--------------hhccccCceEEEecCCce--
Q 014435 330 VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF--------------ELTVNCNLFSYFRSNDHN-- 393 (424)
Q Consensus 330 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy--------------~~~~~TgD~g~~~~~g~~-- 393 (424)
....+++|+|.++ +++|+| +++++++.|+.|||+++|+ +..+| ++||+|||+|+++++|.+
T Consensus 324 ~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~ 400 (511)
T PRK13391 324 LAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYL 400 (511)
T ss_pred cccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEE
Confidence 3455789999999 689999 6899999999999999999 67777 179999999999999976
Q ss_pred -----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++.+|++|+|.+||++|.+||.|.+|+|+|
T Consensus 401 ~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~ 437 (511)
T PRK13391 401 TDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFG 437 (511)
T ss_pred eccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 3 889999999999999999999999999874
No 112
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5e-49 Score=387.36 Aligned_cols=394 Identities=20% Similarity=0.259 Sum_probs=300.0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
+..+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.+++++++
T Consensus 41 ~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~ 120 (545)
T PRK08162 41 DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLI 120 (545)
T ss_pred CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEE
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCC----CC-eEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLN----LP-AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++++....+.+.. .. .+.+........ . ........+++++..... ........+.+++++++|||||||.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~ 196 (545)
T PRK08162 121 VDTEFAEVAREALALLPGPKPLVIDVDDPEYP--G-GRFIGALDYEAFLASGDP-DFAWTLPADEWDAIALNYTSGTTGN 196 (545)
T ss_pred EccchhhHHHHHHhhCCCCceEEEecCccccc--c-CCCcccccHHHHhccCCc-cccccCCCCCCCeEEEEeCCCCCCC
Confidence 9988776654421 11 222221110000 0 001122344444432211 1111112345689999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
||+|+++|+++...+......... ..++++++.+|++|.+++...++..+..| +.+....+++..+++.++++++|+
T Consensus 197 PKgv~~t~~~~~~~~~~~~~~~~~--~~~~~~l~~~pl~h~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~l~~~~~t~ 273 (545)
T PRK08162 197 PKGVVYHHRGAYLNALSNILAWGM--PKHPVYLWTLPMFHCNGWCFPWTVAARAG-TNVCLRKVDPKLIFDLIREHGVTH 273 (545)
T ss_pred CcEEEEecHHHHHHHHHHHHhcCC--CCCCeeEeccCcHhhhhHHHHHHHHHHcc-EEEEeCCCCHHHHHHHHHHcCCeE
Confidence 999999999876654443333333 33478999999999999865555555544 444456789999999999999999
Q ss_pred EEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC--------
Q 014435 257 WWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV-------- 328 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~-------- 328 (424)
+.++|+++..|++........+.+.+.++++|+++++++.+.+++. ++++++.||+||+++.+.......
T Consensus 274 ~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 351 (545)
T PRK08162 274 YCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVYGLTETYGPATVCAWQPEWDALPLD 351 (545)
T ss_pred EEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeecccccccCcceeecccccccccCCcc
Confidence 9999999999987655443345567777899999999999998875 699999999999865444322110
Q ss_pred -CccCCCccccccCC-cEEEEeeCCCCccCCC-C-CceeEEEecCCcchhh------------hhccccCceEEEecCCc
Q 014435 329 -GVRRSGSAGTLVAG-VEAQIVSVDTLKPLPP-N-QLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDH 392 (424)
Q Consensus 329 -~~~~~~~~G~~~~~-~~~~i~d~~~~~~~~~-g-~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~ 392 (424)
......+.|.+.+. ..++|+|++++++++. | +.|||+++|+.++.|| ++||+|||+|+++++|.
T Consensus 352 ~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg~ 431 (545)
T PRK08162 352 ERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHPDGY 431 (545)
T ss_pred chhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcCCcc
Confidence 01112455665543 3578889778888876 3 4699999999999999 57999999999999997
Q ss_pred e-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 393 N-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 393 ~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+ | ++.+|++|+|.+||++|.+||+|.+++|+|
T Consensus 432 l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~ 471 (545)
T PRK08162 432 IKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVA 471 (545)
T ss_pred EEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEe
Confidence 7 3 889999999999999999999999999975
No 113
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-49 Score=375.61 Aligned_cols=333 Identities=17% Similarity=0.148 Sum_probs=284.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++++||+||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+++..+++++++++++
T Consensus 6 ~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i 84 (414)
T PRK08308 6 DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLL 84 (414)
T ss_pred CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEE
Confidence 457999999999999999985 6899999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhh
Q 014435 102 TVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVI 181 (424)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 181 (424)
+++.... . . . .....++++++++|||||||.||+|.
T Consensus 85 ~~~~~~~-----------~---------------------~------~------~~~~~~~~~~~i~~TSGtTG~PKgv~ 120 (414)
T PRK08308 85 YGESDFT-----------K---------------------L------E------AVNYLAEEPSLLQYSSGTTGEPKLIR 120 (414)
T ss_pred ecCcccc-----------c---------------------c------c------CCCCCCCCceEEEECCCCCCCCcEEE
Confidence 8652100 0 0 0 00124678999999999999999999
Q ss_pred hcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEech
Q 014435 182 LTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVP 261 (424)
Q Consensus 182 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 261 (424)
++|+++............. ..+++.+..+|++|.+|+...++.++..|+++++.+..++..+++.++++++|+++++|
T Consensus 121 ~s~~~l~~~~~~~~~~~~~--~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P 198 (414)
T PRK08308 121 RSWTEIDREIEAYNEALNC--EQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVP 198 (414)
T ss_pred EehHhHHHHHHHHHHhhCC--CcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCH
Confidence 9999998877665544433 34488999999999999877789999999999999889999999999999999999999
Q ss_pred HHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccC
Q 014435 262 PIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVA 341 (424)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~ 341 (424)
+++..+.+.... ..+++.++++|+++++++.+++++. +.++++.||+||++.+.. ... ....+++|+|++
T Consensus 199 ~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~-~~~---~~~~~~~G~p~~ 268 (414)
T PRK08308 199 LMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSI-CPD---MKSHLDLGNPLP 268 (414)
T ss_pred HHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeee-cCC---CCCCCccCccCC
Confidence 999999876432 1368889999999999999999987 478999999999875433 221 235578999999
Q ss_pred CcEEEEeeCCCCccCCCCCceeEEEecCCcchhhhhccccCceEEEecCCce------e--eEeeeeeeChhhHHHHHhc
Q 014435 342 GVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSNDHN------D--FFCKLFQVAPAELEGLLVS 413 (424)
Q Consensus 342 ~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~ 413 (424)
++++++.+. .++.||+++++. ++||+|||+|+++++|.+ | ++++|++|+|.+||+++.+
T Consensus 269 ~~~~~~~~~-------~~~~gel~v~~~------~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 335 (414)
T PRK08308 269 HVSVSAGSD-------ENAPEEIVVKMG------DKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLR 335 (414)
T ss_pred CeEEEEecC-------CCCCceEEEEcC------CceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHh
Confidence 999998762 366799999864 589999999999999876 3 9999999999999999999
Q ss_pred CCCcccceecC
Q 014435 414 HPEILDAVVIP 424 (424)
Q Consensus 414 ~p~V~~a~v~g 424 (424)
+|+|.+|+|++
T Consensus 336 ~~~v~~a~v~~ 346 (414)
T PRK08308 336 LPGVQEAVVYR 346 (414)
T ss_pred CCCeeEEEEEe
Confidence 99999999874
No 114
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-49 Score=394.41 Aligned_cols=382 Identities=19% Similarity=0.275 Sum_probs=286.7
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC---CCCHHHHHHHHHhcCCe
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP---VYTVSELSKQVKDSNPK 98 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~i~~~l~~~~~~ 98 (424)
.++|||+||.+++.++|++|.+.| ++||+|+++++|+++++++++||+++|++++|+++ ..+.+++.+++++++++
T Consensus 33 ~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 33 AETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 367999999999999999999999 68999999999999999999999999999999997 45788999999999999
Q ss_pred EEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcc
Q 014435 99 LVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSK 178 (424)
Q Consensus 99 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 178 (424)
+++++++....+.......... ....+...+.. ..... .........++++++++|||||||.||
T Consensus 112 ~il~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PK 176 (578)
T PRK05850 112 VVLTTSAVVDDVTEYVAPQPGQ-------------SAPPVIEVDLL-DLDSP-RGSDARPRDLPSTAYLQYTSGSTRTPA 176 (578)
T ss_pred EEEEcHHHHHHHHHHHhhcccc-------------cccceEeeccc-ccccC-CccccCCCCCCCeEEEEeCCCCCCCCc
Confidence 9999987766654321100000 00000000000 00000 011112345689999999999999999
Q ss_pred hhhhcHHHHHHHHHHHHhhh-hhc---cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCC----CHHHHHHHHH
Q 014435 179 GVILTHKNFIAASLMISAHQ-ELV---GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKF----DIEMALRAIE 250 (424)
Q Consensus 179 ~v~~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~ 250 (424)
+|.++|+++...+....... ... ...++++++.+|++|.+|+...++.++..|+++++.++. ++..+++.++
T Consensus 177 gV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~ 256 (578)
T PRK05850 177 GVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLA 256 (578)
T ss_pred eEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHH
Confidence 99999999987765443222 110 123478999999999999977789999999999988642 7899999999
Q ss_pred HccceEEEechHHHH-HHHhcc---ccccCCCCCeeEEEecCCCCCHHHHHHHHHhCC-----CCeEEecccCccCCCce
Q 014435 251 KYRVTVWWVVPPIIL-ALAKNS---LVRKFDISSLKLVGSGAAPLGKELMEDCQKNIP-----GATIFQGYGMTETCAPI 321 (424)
Q Consensus 251 ~~~~t~~~~~p~~~~-~l~~~~---~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~yG~tE~~~~~ 321 (424)
++++++. .+|..+. .+.... .....+++++|.+++||+++++++.++|.+.|+ +..+++.||+||++..+
T Consensus 257 ~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 335 (578)
T PRK05850 257 SNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYV 335 (578)
T ss_pred HcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhhe
Confidence 9999865 5565543 333221 112345789999999999999999999988763 34789999999987544
Q ss_pred eecCCCCC-----------------------ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh---
Q 014435 322 SLENPLVG-----------------------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF--- 375 (424)
Q Consensus 322 ~~~~~~~~-----------------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy--- 375 (424)
........ .....++|.|. +.+++|+|++++.+++.|+.|||+++|+.++.||
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~ 414 (578)
T PRK05850 336 ATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQK 414 (578)
T ss_pred eccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccccCC
Confidence 43221100 00011334443 5789999977789999999999999999999999
Q ss_pred --------h-------------hccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceec
Q 014435 376 --------E-------------LTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 376 --------~-------------~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~ 423 (424)
. +||+|||+|+++ +|.+ | |+++|++|+|.|||++|.+||.+. ++|+
T Consensus 415 ~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~~-~~v~ 489 (578)
T PRK05850 415 PEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGGR-VAAI 489 (578)
T ss_pred hhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCCc-EEEE
Confidence 0 499999999998 8877 3 999999999999999999999864 5554
No 115
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.5e-49 Score=379.29 Aligned_cols=342 Identities=22% Similarity=0.312 Sum_probs=284.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..++++++++++
T Consensus 25 ~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 104 (458)
T PRK09029 25 NDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFA 104 (458)
T ss_pred CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEE
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchh
Q 014435 101 ITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGV 180 (424)
Q Consensus 101 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 180 (424)
+++++... +.... . . ... .. .........++++++++|||||||.||+|
T Consensus 105 i~~~~~~~-~~~~~--~--------------------~-~~~-----~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv 153 (458)
T PRK09029 105 LVLEGENT-FSALT--S--------------------L-HLQ-----LV--EGAHAVAWQPQRLATMTLTSGSTGLPKAA 153 (458)
T ss_pred EEcCcccc-hhhcc--c--------------------c-ccc-----cc--cccCcccCCCCCeEEEEECCCCCCCCCEE
Confidence 99876432 11000 0 0 000 00 01112234578899999999999999999
Q ss_pred hhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEec
Q 014435 181 ILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVV 260 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 260 (424)
.++|+++.............. .+++++..+|++|.+|+. .++.++..|+++++.+. ..+.+.+. ++|.+..+
T Consensus 154 ~~s~~~~~~~~~~~~~~~~~~--~~~~~l~~~p~~h~~g~~-~~~~~l~~G~~v~~~~~---~~~~~~i~--~~t~~~~~ 225 (458)
T PRK09029 154 VHTAQAHLASAEGVLSLMPFT--AQDSWLLSLPLFHVSGQG-IVWRWLYAGATLVVRDK---QPLEQALA--GCTHASLV 225 (458)
T ss_pred EEeHHHHHHHHHHHhhcCCCC--ccceEEEecCcHhhhhhH-HHHHHHhCCceEEeCCh---HHHHHHHh--hceeeecC
Confidence 999999998877665554443 348999999999999985 66778999999998764 45666663 78999999
Q ss_pred hHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcccccc
Q 014435 261 PPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLV 340 (424)
Q Consensus 261 p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 340 (424)
|+++..++..... ..++|.+++||+++++.+.+++.+. +.++++.||+||++...+..... ...++|+|+
T Consensus 226 P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~~----~~~~~G~~~ 295 (458)
T PRK09029 226 PTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKRAD----GLAGVGSPL 295 (458)
T ss_pred hHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccCCC----CCCCCCCCC
Confidence 9999998876442 3479999999999999999998865 79999999999988655443221 234699999
Q ss_pred CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-------e-eEeeee
Q 014435 341 AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D-FFCKLF 400 (424)
Q Consensus 341 ~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d-i~~~G~ 400 (424)
++++++|++ |||+++|+.++.|| ++||+|||+|+++ +|.+ | ++++|+
T Consensus 296 ~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~ 362 (458)
T PRK09029 296 PGREVKLVD------------GEIWLRGASLALGYWRQGQLVPLVNDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGE 362 (458)
T ss_pred CCCEEEEeC------------CEEEEecCceeeeeecCccccccccCCCccCCCCcEEEe-CCEEEEecccccceeeCCE
Confidence 999999987 89999999999998 5799999999999 8877 3 899999
Q ss_pred eeChhhHHHHHhcCCCcccceecC
Q 014435 401 QVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 401 ~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|+|.+||++|.+||+|.+|+|+|
T Consensus 363 ~v~p~eiE~~l~~~~~v~~~~v~~ 386 (458)
T PRK09029 363 GIQPEEIERVINQHPLVQQVFVVP 386 (458)
T ss_pred EeCHHHHHHHHhcCCCcceEEEEc
Confidence 999999999999999999999985
No 116
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.9e-49 Score=370.29 Aligned_cols=395 Identities=26% Similarity=0.348 Sum_probs=320.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+||.|+.+.+.++|..|...|+++||+|++++|+.++++++.+||.++|++..++-..+++.++...++..+++++++.+
T Consensus 97 ~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d 176 (626)
T KOG1175|consen 97 WTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQD 176 (626)
T ss_pred EEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEe
Confidence 89999999999999999988999999999999999999999999999999999999999999999999999999999987
Q ss_pred cchHHHhcCCCCeEEEecCCCcc------ccc-cccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCc
Q 014435 105 ELWDKVKDLNLPAVLLGSKDKVS------SSG-LISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVS 177 (424)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~p 177 (424)
......+...............+ ... ..........+++.+.... +..+....+.+|+.+|+|||||||.|
T Consensus 177 ~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~--~~~~~~~~~~edpl~IlfTSGtTg~P 254 (626)
T KOG1175|consen 177 VVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKAS--PEHPCVPVKAEDPLFILFTSGTTGKP 254 (626)
T ss_pred eeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcC--CCCCceecCccCceEEEecCCCCCCC
Confidence 66554444332110000000000 000 0011112334555545444 34446777899999999999999999
Q ss_pred chhhhcHHHHHHH-HHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC--CCCHHHHHHHHHHccc
Q 014435 178 KGVILTHKNFIAA-SLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG--KFDIEMALRAIEKYRV 254 (424)
Q Consensus 178 K~v~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~ 254 (424)
|++.+++....-. +...... +.....|++.+.....|+.|.+...+.+|..|+++++.+ ++++..+++.+.++++
T Consensus 255 K~v~ht~~g~ll~~~~~~~~~--~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~i 332 (626)
T KOG1175|consen 255 KGVIHTTGGYLLGAALTSRYH--FDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKV 332 (626)
T ss_pred CceeeccCcchHHHhhhccee--ccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcce
Confidence 9999988865443 3332233 333444999999999999999988999999999999985 3699999999999999
Q ss_pred eEEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccC
Q 014435 255 TVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRR 332 (424)
Q Consensus 255 t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~ 332 (424)
|++++.|+.++.|.+.... ...++++||.+.+.|++++++..+++.+.+....|++.||+||+|+.+....+......
T Consensus 333 t~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~ 412 (626)
T KOG1175|consen 333 TVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIK 412 (626)
T ss_pred EEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcC
Confidence 9999999999987766544 34445789999999999999999999999853469999999999998887666543578
Q ss_pred CCccccccCCcEEEEeeCCCCccCCCC-CceeEEEecCCc---chhh---------------hhccccCceEEEecCCce
Q 014435 333 SGSAGTLVAGVEAQIVSVDTLKPLPPN-QLGEIWVRGPNV---TPVF---------------ELTVNCNLFSYFRSNDHN 393 (424)
Q Consensus 333 ~~~~G~~~~~~~~~i~d~~~~~~~~~g-~~Gel~v~~~~~---~~gy---------------~~~~~TgD~g~~~~~g~~ 393 (424)
+++.+.|.+++.+.|.| ++|+.++.+ +.|+|+++.+.. +.+| .++|.|||.+++|+||.+
T Consensus 413 pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~ 491 (626)
T KOG1175|consen 413 PGSAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYY 491 (626)
T ss_pred ccccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceE
Confidence 89999999999999999 589988877 999999998754 3333 566799999999999988
Q ss_pred ------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++++|+++++.|||+++.+||.|.|++|||
T Consensus 492 ~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg 530 (626)
T KOG1175|consen 492 WILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVG 530 (626)
T ss_pred EEEecccccccccceeecHHHHHHHHhhCcchhheeeec
Confidence 4 999999999999999999999999999997
No 117
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.2e-48 Score=378.22 Aligned_cols=390 Identities=21% Similarity=0.238 Sum_probs=301.1
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
..+.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.+++++++++++
T Consensus 25 ~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 104 (533)
T PRK07798 25 GDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVAL 104 (533)
T ss_pred CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEE
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCCCC----eEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 101 ITVPELWDKVKDLNLP----AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 101 i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
+++++....+.+.... ..++........ ....+..++++++..... ...... ..++.++++|||||||.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~i~~TSGTTG~ 177 (533)
T PRK07798 105 VYEREFAPRVAEVLPRLPKLRTLVVVEDGSGN----DLLPGAVDYEDALAAGSP--ERDFGE-RSPDDLYLLYTGGTTGM 177 (533)
T ss_pred EEchhhHHHHHHHhccCCCccEEEEecCCccc----ccCCccccHHHHHhccCC--cCCCCC-CCCCceEEEECCCCCCC
Confidence 9998766665543211 111111111100 011123355555543221 111112 23445789999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhh------hh-------ccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC--CCC
Q 014435 177 SKGVILTHKNFIAASLMISAHQ------EL-------VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG--KFD 241 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~ 241 (424)
||+|+++|+++........... .. ....+++++..+|++|..++. .++.++..|+++++.+ .++
T Consensus 178 PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~-~~~~~l~~G~~~~~~~~~~~~ 256 (533)
T PRK07798 178 PKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQW-AAFAALFSGQTVVLLPDVRFD 256 (533)
T ss_pred CcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHH-HHHHHHhcCceEEEecCCCcC
Confidence 9999999999876543321111 00 002347899999999999996 7889999999999998 789
Q ss_pred HHHHHHHHHHccceEEEechHHHHH-HHhccc-cccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCC
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILA-LAKNSL-VRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCA 319 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~-l~~~~~-~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 319 (424)
+..+++.++++++|++.++|..+.. +.+... .....++++|.+++||+++++.+.+++.+.+++..+++.||+||++.
T Consensus 257 ~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 336 (533)
T PRK07798 257 ADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGF 336 (533)
T ss_pred HHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeeccccccc
Confidence 9999999999999999999865533 333322 23446789999999999999999999999988899999999999865
Q ss_pred ceeecCCCCCccCCCccc--cccCCcEEEEeeCCCCccCCCCCc--eeEEEecCCcchhh----------------hhcc
Q 014435 320 PISLENPLVGVRRSGSAG--TLVAGVEAQIVSVDTLKPLPPNQL--GEIWVRGPNVTPVF----------------ELTV 379 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G--~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~~~~~~~gy----------------~~~~ 379 (424)
........ .....| .+.++..++|+| +++++++.|+. |+++.. +.+..|| .+||
T Consensus 337 ~~~~~~~~----~~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~~~-~~~~~gy~~~~~~t~~~f~~~~~~~~~ 410 (533)
T PRK07798 337 GGSGTVAK----GAVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIARR-GHIPLGYYKDPEKTAETFPTIDGVRYA 410 (533)
T ss_pred ccccCCCC----CCccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEEee-cCccccccCChhhhHHhhccCCCCceE
Confidence 44432211 112233 788899999999 67889999987 777654 5677777 1489
Q ss_pred ccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 380 NCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 380 ~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|||+++++++|.+ | ++.+|++|+|.+||+++.++|.|.+++|+|
T Consensus 411 ~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 463 (533)
T PRK07798 411 IPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVG 463 (533)
T ss_pred EcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEe
Confidence 99999999999987 3 899999999999999999999999999875
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-47 Score=345.16 Aligned_cols=399 Identities=19% Similarity=0.206 Sum_probs=316.5
Q ss_pred eeecCCCCCCCCC---CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHH
Q 014435 11 IYRSLRPPLVLPS---DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSE 87 (424)
Q Consensus 11 ~~~~~~~~~~~~~---~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 87 (424)
.-.+.++++..++ .+||+|+.+.++++|+.|+.+|++.||.|+++|+|.+|++.++++++++|++...||.+...+.
T Consensus 88 rr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~iNtNlR~~~ 167 (649)
T KOG1179|consen 88 RRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITAFINTNLRGEP 167 (649)
T ss_pred HhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceeeeeccccccch
Confidence 3446677776554 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEcccchHHHhcCCCC----eEEEecCCCccccccccCCCcccchhhhhhccCCCC-C-CCCCCCCC
Q 014435 88 LSKQVKDSNPKLVITVPELWDKVKDLNLP----AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT-D-IPDVSVKQ 161 (424)
Q Consensus 88 i~~~l~~~~~~~ii~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~ 161 (424)
+.|.++.++++++|++++..+.+.++... .+-....+.. .......++...+......+ + ......+.
T Consensus 168 LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~------~~~~g~~~L~~~l~~~~~~~vp~~~~~~~~~ 241 (649)
T KOG1179|consen 168 LLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPT------SVPDGIESLLAKLSAAPKHPVPVSTRSGLTF 241 (649)
T ss_pred hhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCC------CCCchHHHHHHhhcccccCCCCcccCCCccc
Confidence 99999999999999999988877766221 1111111100 11223333333333322211 1 12334466
Q ss_pred CCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCC
Q 014435 162 TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD 241 (424)
Q Consensus 162 ~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~ 241 (424)
.++++++|||||||.||+.+++|..+...+.......++... |+++..+|++|..+....+..++..|+|+++-.+|+
T Consensus 242 ~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~--DvvY~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKFS 319 (649)
T KOG1179|consen 242 RSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTAD--DVVYTTLPLYHSAAGILGIGGCLLHGATVVLRKKFS 319 (649)
T ss_pred cceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCcc--ceEEEcchhHHHHHHHHHHHHHHhcCceEEEecccc
Confidence 789999999999999999999999988887766666666555 999999999999999989999999999999999999
Q ss_pred HHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCce
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPI 321 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~ 321 (424)
...+++...+|++|++.-.--+.+.|++.+......-.++|..+-.| +.+++++.|.++|+..++.+.||+||...-.
T Consensus 320 AS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNG--LR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~ 397 (649)
T KOG1179|consen 320 ASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNG--LRPDIWQQFVKRFGIIKIGEFYGATEGNSNL 397 (649)
T ss_pred hhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCC--CCchHHHHHHHHcCCCeEEEEeccccCccee
Confidence 99999999999999999999999999999887777777888766444 8899999999999878899999999965433
Q ss_pred eecCCCCCccCCCccccc------cCCcEEEEeeCCCCcc----------CCCCCceeEEE--ecCCc---chhh-----
Q 014435 322 SLENPLVGVRRSGSAGTL------VAGVEAQIVSVDTLKP----------LPPNQLGEIWV--RGPNV---TPVF----- 375 (424)
Q Consensus 322 ~~~~~~~~~~~~~~~G~~------~~~~~~~i~d~~~~~~----------~~~g~~Gel~v--~~~~~---~~gy----- 375 (424)
... +.+.|.+|+. +--+++-=+|++++++ +++||+|.++- ..... +.||
T Consensus 398 ~N~-----d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~ 472 (649)
T KOG1179|consen 398 VNY-----DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKK 472 (649)
T ss_pred eee-----cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchh
Confidence 322 2344444431 1112322234456654 58999997753 22333 6788
Q ss_pred --------------hhccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 376 --------------ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 376 --------------~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|.+|.|||+-.+|+.|++ | ++..|+||+..|||++|.....+.||.|+|
T Consensus 473 ~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~VYG 543 (649)
T KOG1179|consen 473 ATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNVYG 543 (649)
T ss_pred hhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeEEE
Confidence 778999999999999998 4 999999999999999999999999999986
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.3e-40 Score=344.68 Aligned_cols=376 Identities=11% Similarity=0.063 Sum_probs=275.6
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.+||+|+.++++++|+.|.+.|+++||+|+|+++|+++|+++.+||+++|++.+|+++ +.+++.+++++++++++|
T Consensus 455 ~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVf 532 (1452)
T PTZ00297 455 SEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVF 532 (1452)
T ss_pred ceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEE
Confidence 356999999999999999999999999999999999999999999999999999999975 467899999999999999
Q ss_pred EcccchHHHhcCC---CCeEEEecCCCcccc-c-cccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEec---CCCC
Q 014435 102 TVPELWDKVKDLN---LPAVLLGSKDKVSSS-G-LISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLY---SSGT 173 (424)
Q Consensus 102 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---TSGt 173 (424)
++.+....+.... .+.++.......... . .......+.+|++++..+............++|++.|+| ||||
T Consensus 533 v~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGT 612 (1452)
T PTZ00297 533 ADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSAS 612 (1452)
T ss_pred EchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCC
Confidence 9988777665442 233333321100000 0 000112356788888765421111223346788998885 9999
Q ss_pred CCCcchhhhcHHHHHHHHHHHHhhhhh-ccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHc
Q 014435 174 TGVSKGVILTHKNFIAASLMISAHQEL-VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKY 252 (424)
Q Consensus 174 TG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~ 252 (424)
||.||||++||++++..+......... ....++++++++|++|+++.. ..+.++..|+++.. +++..+++.++++
T Consensus 613 TG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~-~~~~~l~~G~~I~~---~d~~~lledL~~~ 688 (1452)
T PTZ00297 613 GDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRV-FVLGLFAHGSAVAT---VDAAHLQRAFVKF 688 (1452)
T ss_pred CcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHH-HHHHHHHcCCEEEe---CCHHHHHHHHHHH
Confidence 999999999999999988776443211 123458999999999999964 66777899999874 4789999999999
Q ss_pred cceEEEechHHHHHHHhccccc--------------------------cC----------------CCCCeeEEEecCCC
Q 014435 253 RVTVWWVVPPIILALAKNSLVR--------------------------KF----------------DISSLKLVGSGAAP 290 (424)
Q Consensus 253 ~~t~~~~~p~~~~~l~~~~~~~--------------------------~~----------------~~~~lr~~~~~g~~ 290 (424)
+||+++++|.+++.+.+....+ .. --.++|.+++||+
T Consensus 689 rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga- 767 (1452)
T PTZ00297 689 QPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVS- 767 (1452)
T ss_pred CCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCC-
Confidence 9999999999998764421000 00 0147899988873
Q ss_pred CCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeC-CCCccCCCCCceeEEEecC
Q 014435 291 LGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSV-DTLKPLPPNQLGEIWVRGP 369 (424)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~~~~~~g~~Gel~v~~~ 369 (424)
++........ +++++.+||+||.. +.+.+. ... ..|.|+|++++||.+. +.+. .+..|||++++.
T Consensus 768 --~~~l~~~l~~--~i~i~~g~glTE~~---~~~~~~--~~~--~~G~PlpgvEvKI~~~~E~~~---~~~~GEIlvr~~ 833 (1452)
T PTZ00297 768 --EESTSFSLLE--HISVCYVPCLREVF---FLPSEG--VFC--VDGTPAPSLQVDLEPFDEPSD---GAGIGQLVLAKK 833 (1452)
T ss_pred --ccccChHHhC--CceEEEecceEEee---eecCCC--Ccc--cCCeecCceEEEEcccccccC---CCCCCeEEEEEC
Confidence 2222233333 47889999999942 233332 222 2399999999999873 2222 134699999764
Q ss_pred CcchhhhhccccCce-EEEecCCce-------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 370 NVTPVFELTVNCNLF-SYFRSNDHN-------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 370 ~~~~gy~~~~~TgD~-g~~~~~g~~-------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
..+..|.+. +.|.+||.+ | +..+|++|.|+.||+.+.++|.|.+++|+|
T Consensus 834 ------kdpe~T~e~~~gW~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~G 892 (1452)
T PTZ00297 834 ------GEPRRTLPIAAQWKRDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYA 892 (1452)
T ss_pred ------CChHHHHHhhCcCccCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEe
Confidence 345566665 467788887 3 445999999999999999999999999987
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-35 Score=296.81 Aligned_cols=374 Identities=21% Similarity=0.272 Sum_probs=295.0
Q ss_pred cCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLVL-PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++.. ...+||+|+..+++++|+.|.+.|++++++|+++.+.++++++.++|++++|+.++|+++.++.+.+..++
T Consensus 241 p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l 320 (642)
T COG1020 241 PDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYIL 320 (642)
T ss_pred CCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHH
Confidence 34434443 46799999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+..+++.+++..+.......... + ..+........ .........+++.++++||||
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~----~-------------------~~~~~~~~~~~-~~~~~~~~~~~~~ayiiytsg 376 (642)
T COG1020 321 EDSRPTLLLTQAHLRVDDVGLPG----L-------------------ALDDALSEIPD-TDPIPQALLGDALAYIIYTSG 376 (642)
T ss_pred hhcCccEEEeccccccccccCCc----c-------------------ccccccccCCc-cCcccccCCCCCeEEEEEccC
Confidence 99999999998433222111110 0 00000000000 011112334588999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i 249 (424)
|||.||||..+|+++............. ..+++++...++....+.. .++.++..|+++++.+. .++..+.+.+
T Consensus 377 stg~Pkgv~~~h~~~~~~~~~~~~~~~~--~~~d~~l~~~s~~fD~~~~-~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~ 453 (642)
T COG1020 377 STGQPKGVRIEHRALANLLNDAGARFGL--DADDRVLALASLSFDASVF-EIFGALLEGARLVLAPALLQVDPAALLELL 453 (642)
T ss_pred CCCCCCCceecCHHHHHHHHHHHHhcCC--CcccEEeecCCcccchhHH-HHHHHHhCCCEEEecCccccCCHHHHHHHH
Confidence 9999999999999998855555444333 3347888888886666663 78899999999998864 6899999999
Q ss_pred HHccceEEEechHHHHHHHhcccccc--CCCCCeeEEEecCCCCCHHHHHHHHHhCC-CCeEEecccCccCCCceeecCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIP-GATIFQGYGMTETCAPISLENP 326 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~--~~~~~lr~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~ 326 (424)
+++++|.+..+|.++..+........ .....+|.+++||+.++..+.+++.+..+ ...+.+.||.||+.........
T Consensus 454 ~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~ 533 (642)
T COG1020 454 EAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPI 533 (642)
T ss_pred HHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEc
Confidence 99999999999999999887632222 12235999999999999999999988764 4789999999996554443222
Q ss_pred CCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hh-ccccCceEEEecCCce
Q 014435 327 LVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------EL-TVNCNLFSYFRSNDHN 393 (424)
Q Consensus 327 ~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~-~~~TgD~g~~~~~g~~ 393 (424)
........++|+|+++..+.|.| +.++++|.|..||+++.|..+..|| .. +|+|||++++..+|.+
T Consensus 534 ~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~ 612 (642)
T COG1020 534 SAELESRVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGAL 612 (642)
T ss_pred ccccCCCCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeE
Confidence 21111146899999999999999 7999999999999999999999999 33 7899999999999977
Q ss_pred ------e--eEeeeeeeChhhHHHHHhcCC
Q 014435 394 ------D--FFCKLFQVAPAELEGLLVSHP 415 (424)
Q Consensus 394 ------d--i~~~G~~v~~~~iE~~l~~~p 415 (424)
| +|++|++|.+.|||..+.++|
T Consensus 613 e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 613 EYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred EEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 5 999999999999999998876
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-34 Score=269.72 Aligned_cols=233 Identities=23% Similarity=0.309 Sum_probs=195.4
Q ss_pred CCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEe--
Q 014435 159 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS-- 236 (424)
Q Consensus 159 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~-- 236 (424)
..++|+++++|||||||.||+|.++|+++........... ...++++..+|++|.+|+. .++.++..|+++++
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~----~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v~~~ 106 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL----GGPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPVELD 106 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc----CCCCeEEEECChHHHHHHH-HHHHHHHcCCeEEecC
Confidence 3468999999999999999999999999988765543322 1337889999999999985 66778888888877
Q ss_pred -cCCCCHHHHHHHHHHcc--ceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEeccc
Q 014435 237 -MGKFDIEMALRAIEKYR--VTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYG 313 (424)
Q Consensus 237 -~~~~~~~~~~~~i~~~~--~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG 313 (424)
...+++..+.+.+++++ .++...+|..+..++..... ...++++|.+++||+++++++.+++.+. ++++++.||
T Consensus 107 ~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG 183 (358)
T PRK07824 107 VSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYG 183 (358)
T ss_pred cCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEeccc
Confidence 34578999999999998 56777788888777665432 2357899999999999999999998864 799999999
Q ss_pred CccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-----------hhccccC
Q 014435 314 MTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-----------ELTVNCN 382 (424)
Q Consensus 314 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-----------~~~~~Tg 382 (424)
+||++..+. ..|.|++++++++.+ |||+++|+.++.|| ++||+||
T Consensus 184 ~TE~~~~~~------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~~~~~~g~~~TG 239 (358)
T PRK07824 184 MSETSGGCV------------YDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPDPFAEPGWFRTD 239 (358)
T ss_pred CCccCCCcC------------cCceeCCCCEEEecC------------CEEEEecCccccccCCCcccccccCCCceecc
Confidence 999875432 248899999999854 89999999999999 4599999
Q ss_pred ceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 383 LFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 383 D~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|+|++ ++|.+ | ++.+|++|+|.+||++|.+||+|.+|+|+|
T Consensus 240 Dl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~ 288 (358)
T PRK07824 240 DLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFG 288 (358)
T ss_pred cEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 99999 77766 3 899999999999999999999999999985
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=9.6e-32 Score=249.20 Aligned_cols=227 Identities=17% Similarity=0.129 Sum_probs=180.2
Q ss_pred CCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCC
Q 014435 162 TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD 241 (424)
Q Consensus 162 ~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~ 241 (424)
+..++++|||||||.||+|.++|+++...+..............+++++.+|++|.+|+...++.++..|+++++.+.++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 44689999999999999999999999887766655444433333689999999999998767888899999999988888
Q ss_pred HHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCce
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPI 321 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~ 321 (424)
+..+++.++.. |+++++|.+++.+.+.. .+++++|. ++||+++++++++.+++. +...+++.||+||+++++
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~ 246 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIG 246 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccc
Confidence 88888877643 89999999999997653 34677876 678999999999999886 234799999999988755
Q ss_pred eecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhhhhccccCceEEEecCCce-------e
Q 014435 322 SLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSNDHN-------D 394 (424)
Q Consensus 322 ~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~g~~-------d 394 (424)
.... ++..|.+.|+.++++ + ++.. .|+ ..||+|||+|+++++|++ |
T Consensus 247 ~~~~-------~~~~~~~~p~~~~~~-~--~~~~-----------~g~------~~~~~tgD~g~~d~~G~l~i~GR~dd 299 (386)
T TIGR02372 247 LREA-------PDDPFRLLPDLACFA-D--TLSS-----------AGL------ARRLDLQDRLAWDKDGGFTILGRKDE 299 (386)
T ss_pred cccC-------CCCCcccCCCccccC-C--CccC-----------CCc------cceeecCceEEEcCCCcEEEecccCC
Confidence 4321 224567888876654 1 2110 122 247899999999999988 3
Q ss_pred -eEeeeeeeChhhHHHHHhcCCCcccceec
Q 014435 395 -FFCKLFQVAPAELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 395 -i~~~G~~v~~~~iE~~l~~~p~V~~a~v~ 423 (424)
|+++|++|+|.+||++|.+||+|.+|+|+
T Consensus 300 ~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~ 329 (386)
T TIGR02372 300 ILQVGGVNVSPGHVRDILERNPRVRAAAVR 329 (386)
T ss_pred EEEECCEEEcHHHHHHHHHcCCCceEEEEE
Confidence 99999999999999999999999999875
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=4.7e-31 Score=250.67 Aligned_cols=254 Identities=18% Similarity=0.197 Sum_probs=191.4
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhh-hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE-LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
..++++.+++||||||.||++.++|.++............ .....++++++..+..+..+.....+..+..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 4567888999999999999999999998765443332221 122334777776554433333334556778899998877
Q ss_pred CCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCC--CCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCcc
Q 014435 239 KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFD--ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTE 316 (424)
Q Consensus 239 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~--~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE 316 (424)
..++..+++.|+++++|+++++|+++..|++.....+.+ ..++|.++++|+++++++.+.+++.| ++++++.||+||
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~tE 231 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLSE 231 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccchh
Confidence 778899999999999999999999999988754433322 35899999999999999999999998 699999999999
Q ss_pred CCC-ceeecCCCCCccCCCcccccc--CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhhhhccccCceEEEecC-C-
Q 014435 317 TCA-PISLENPLVGVRRSGSAGTLV--AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSN-D- 391 (424)
Q Consensus 317 ~~~-~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~-g- 391 (424)
+++ .+...+.. . ..|.++ +++.++|+|+++++++++|+.|||++++..-......||+|||+++++++ |
T Consensus 232 ~~~~~~~~~~~~---~---~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~~~~~p~~ry~TGDl~~~~~~~Gr 305 (422)
T TIGR02155 232 VIGPGVAMECVE---T---QDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLTKEALPVIRYRTRDLTRLLPGTAR 305 (422)
T ss_pred hcCCceeecccc---c---CCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCCccccceeeEEcCcEEEEECCCCC
Confidence 853 22222111 1 112233 45778899977899999999999999986432222679999999999875 4
Q ss_pred ------ce-----e-eEeeeeeeChhhHHHHHhcCCCcccc
Q 014435 392 ------HN-----D-FFCKLFQVAPAELEGLLVSHPEILDA 420 (424)
Q Consensus 392 ------~~-----d-i~~~G~~v~~~~iE~~l~~~p~V~~a 420 (424)
.+ | ++.+|.+|+|.+||.+|.+||+|...
T Consensus 306 ~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~ 346 (422)
T TIGR02155 306 TMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPH 346 (422)
T ss_pred cccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCC
Confidence 12 4 88999999999999999999999843
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.96 E-value=3.9e-27 Score=226.48 Aligned_cols=403 Identities=16% Similarity=0.191 Sum_probs=282.6
Q ss_pred CCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCC
Q 014435 6 YGRDGIYRSLRPPLVLPSDPSFSMFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT 84 (424)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 84 (424)
-+++..|--.+......+++||++|++++.+++.+|... -+++||.|++++|+++|++++++||+.+|++++|++|...
T Consensus 783 tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIpv~p~~~ 862 (1363)
T KOG3628|consen 783 TPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIPVPPPHA 862 (1363)
T ss_pred CCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeeeccCCccH
Confidence 344555555555555777899999999999999999976 4899999999999999999999999999999999998533
Q ss_pred ------HHHHHHHHHhcCCeEEEEcccchHHHhcCCC---------CeEEEecCCCccccccccCCCcccchhhhhhccC
Q 014435 85 ------VSELSKQVKDSNPKLVITVPELWDKVKDLNL---------PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 149 (424)
Q Consensus 85 ------~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (424)
...+..+++.++++.|+++......++.-.. ..++...+ ....+..... +...
T Consensus 863 s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~----------~~~t~~k~~~--~~~k 930 (1363)
T KOG3628|consen 863 SNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPK----------LPETIRKRKK--NIKK 930 (1363)
T ss_pred HhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccc----------cchhhhhhhh--hhhc
Confidence 3567899999999999999876665544221 11111000 0000111000 1111
Q ss_pred CCCCCCCCCCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhh
Q 014435 150 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 229 (424)
Q Consensus 150 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~ 229 (424)
.....++....++.+|++-+.--++|.--++.++|.++++.++.......+... ..++...+.+...|+..+.+..++
T Consensus 931 ~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~--rpl~~~~~~~sGlgf~~wcLlgVy 1008 (1363)
T KOG3628|consen 931 LNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKS--RPLLGCSSPYSGLGFNHWCLLGVY 1008 (1363)
T ss_pred cCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccC--CceEEEecCccchhHHHHHHHHHH
Confidence 112333444567889999888888999999999999999999998888877655 667777777778888888999999
Q ss_pred cCceEEecCC----CCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCe------eEEEecCCCCCHHHHHHH
Q 014435 230 KGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSL------KLVGSGAAPLGKELMEDC 299 (424)
Q Consensus 230 ~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l------r~~~~~g~~~~~~~~~~~ 299 (424)
.|...++.++ -++.-+++.++++++.-++.+=..++...+.......+++.. ..++..-++....+.+.|
T Consensus 1009 sGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ali~sf 1088 (1363)
T KOG3628|consen 1009 SGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIALIASF 1088 (1363)
T ss_pred cCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHHHHHH
Confidence 9999777765 488999999999999998888777776655433222222211 333444555666666666
Q ss_pred HHhCCCC-----eEEecccCccCCCceeecCCC-------C-------------------CccCCCccccccCCcEEEEe
Q 014435 300 QKNIPGA-----TIFQGYGMTETCAPISLENPL-------V-------------------GVRRSGSAGTLVAGVEAQIV 348 (424)
Q Consensus 300 ~~~~~~~-----~~~~~yG~tE~~~~~~~~~~~-------~-------------------~~~~~~~~G~~~~~~~~~i~ 348 (424)
.+.|... .+.-.|+.-= ...++.+... + ........|...+++++.|+
T Consensus 1089 ~klfa~igLsp~avStsys~r~-Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~Iv 1167 (1363)
T KOG3628|consen 1089 KKLFAAIGLSPRAVSTSYSSRV-NPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIV 1167 (1363)
T ss_pred HHHHHHcCCChhhhcccccccC-ChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEe
Confidence 6655311 1222233221 1111111000 0 00111134777889999999
Q ss_pred eCCCCccCCCCCceeEEEecCCcchhh-----------------------hhccccCceEEEecC---------------
Q 014435 349 SVDTLKPLPPNQLGEIWVRGPNVTPVF-----------------------ELTVNCNLFSYFRSN--------------- 390 (424)
Q Consensus 349 d~~~~~~~~~g~~Gel~v~~~~~~~gy-----------------------~~~~~TgD~g~~~~~--------------- 390 (424)
+||+..++.+|+.||||+.|.+-+.+| ..|-||||+|+++.-
T Consensus 1168 nPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyV 1247 (1363)
T KOG3628|consen 1168 NPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYV 1247 (1363)
T ss_pred CCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEE
Confidence 999999999999999999998765544 445599999997532
Q ss_pred -Ccee--eEeeeeeeChhhHHHHH-hcCCCcccceec
Q 014435 391 -DHND--FFCKLFQVAPAELEGLL-VSHPEILDAVVI 423 (424)
Q Consensus 391 -g~~d--i~~~G~~v~~~~iE~~l-~~~p~V~~a~v~ 423 (424)
|.+| +.++|-+.+|.+||..+ +.||.|-+|+||
T Consensus 1248 lG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF 1284 (1363)
T KOG3628|consen 1248 LGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVF 1284 (1363)
T ss_pred eecccceeeecCcccCcchHHHHHHHhcccccceeeE
Confidence 1223 88999999999999999 559999999987
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.95 E-value=8.4e-27 Score=221.64 Aligned_cols=247 Identities=15% Similarity=0.117 Sum_probs=182.0
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhh-hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE-LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
..++++.+.+||||||.||++.+||+++............ ..-...++++...+..+..+.....+.+...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 4568889999999999999999999998776554433321 112334788888887776665444566778888876543
Q ss_pred CCCHHHHHHHHHHccceEEEechHHHHHHHhccccccC--CCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCcc
Q 014435 239 KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKF--DISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTE 316 (424)
Q Consensus 239 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~--~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE 316 (424)
. ....++.++++++|++.++|+.+..|.+.....+. ...++|.+++||+++++++.+.+.+.| ++++++.||+||
T Consensus 164 ~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~TE 240 (445)
T TIGR03335 164 K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGSTE 240 (445)
T ss_pred c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCChhh
Confidence 2 34678999999999999999988877765433322 246899999999999999999999988 699999999999
Q ss_pred CCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcc---hhh-hhccccCceEEEec-C-
Q 014435 317 TCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVT---PVF-ELTVNCNLFSYFRS-N- 390 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~---~gy-~~~~~TgD~g~~~~-~- 390 (424)
++. +..+. . ......+.+.+.++|+|+++++++++|+.|||++++-.-. .++ --.|+|||++++.. +
T Consensus 241 ~~~-~~~c~-~-----~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~~r~~~PliRYrtgD~~~~~~~~~ 313 (445)
T TIGR03335 241 GTM-CGECQ-A-----VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPGERCGSLLINYDTEDTTVVISRDR 313 (445)
T ss_pred hhh-eEEec-C-----CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCCccCCceEEEeecCceEEEecCCC
Confidence 752 22111 1 1112233356789999988888999999999999975421 112 34689999998732 2
Q ss_pred ---C----------cee--eEeeeeeeChhhHHHHHhcCCC
Q 014435 391 ---D----------HND--FFCKLFQVAPAELEGLLVSHPE 416 (424)
Q Consensus 391 ---g----------~~d--i~~~G~~v~~~~iE~~l~~~p~ 416 (424)
| +.| ++++|.+|+|.+||++|.++++
T Consensus 314 C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~ 354 (445)
T TIGR03335 314 CPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQREN 354 (445)
T ss_pred CCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCC
Confidence 2 223 8889999999999999999543
No 126
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=4.9e-25 Score=189.47 Aligned_cols=200 Identities=19% Similarity=0.156 Sum_probs=147.5
Q ss_pred CCcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~-~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||+++|++++|+| .++++++++
T Consensus 27 ~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~ 93 (227)
T TIGR03089 27 ELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLAG-------------DPDADVVVT 93 (227)
T ss_pred EEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeCC-------------CCCCCEEEe
Confidence 59999999999999999998 7999999999999999999999999999999999996 678999999
Q ss_pred cccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhhh
Q 014435 103 VPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVIL 182 (424)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 182 (424)
+++....... ......+........... ....+..++.+....... ...+.....++|++.++||||+
T Consensus 94 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~a~l~yTsg~--------- 161 (227)
T TIGR03089 94 GPDRLAAAAG-SGEVVALSLDPLGRRVAG-ELPPGVIDFAPEVRVHGD-QFAPYEPPDATAPALVAGGGEW--------- 161 (227)
T ss_pred Ccchhhhccc-CCceEEEeccccccCCCC-CCCCcccchhhhhhccCC-CCCCCCCCCCCcceeeeccccc---------
Confidence 9887776542 222222211000000000 011222355554442211 1111113456899999999986
Q ss_pred cHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccce
Q 014435 183 THKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVT 255 (424)
Q Consensus 183 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 255 (424)
+|.++.... ...+. ..+|+++ .+|++|.+|+...++.++..|+++++.++|++..+++.|+++|+|
T Consensus 162 ~~~~~~~~~----~~~~l--~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 162 TGAELVAAA----RAAGL--PPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred cHHHHHHHH----hhcCC--CCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 555655543 22223 3449999 999999999987899999999999999999999999999999987
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.92 E-value=1.6e-23 Score=189.44 Aligned_cols=253 Identities=22% Similarity=0.230 Sum_probs=192.6
Q ss_pred CCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCC-cEEEEecc-hHHHHHHHHHHHHHhhcCceEEe
Q 014435 159 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLP-MFHVFGLSVILYDQLQKGNCVVS 236 (424)
Q Consensus 159 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p-~~~~~g~~~~~~~~l~~G~~~~~ 236 (424)
...++...|-.||||||+|+.+.+++..+...+..+...+....... |++....- ..+..|+. ..+++-..|++++-
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~-~~~ga~rig~~vip 165 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLG-LHYGAERIGATVIP 165 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCch-hHHHHHhhCEEEEc
Confidence 34466677889999999999999999998888777766665543332 55544333 11122222 33444557888877
Q ss_pred cCCCCHHHHHHHHHHccceEEEechHHHHHHHhcccccc--CCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccC
Q 014435 237 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGM 314 (424)
Q Consensus 237 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~--~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~ 314 (424)
..+-+.+..+++++++++|++.++|+.+..|.+.....+ ..-.++|.+++|+|++++++++.+.+.| |+..++.||+
T Consensus 166 ~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGl 244 (438)
T COG1541 166 ISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGL 244 (438)
T ss_pred cCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeecccc
Confidence 666788999999999999999999999999988776663 2335899999999999999999999999 7999999999
Q ss_pred ccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhhhhccccCceEEEecC----
Q 014435 315 TETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSN---- 390 (424)
Q Consensus 315 tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~---- 390 (424)
||..+.....+.. ......+-+...++|+||++++.+++|+.|||+++.-.-..----.|+|||+..+.++
T Consensus 245 tE~~g~g~~eC~~-----~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~~~~~PlIRYrtgDit~i~~~~C~c 319 (438)
T COG1541 245 TEGFGPGAGECTE-----RNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLTKEGMPLIRYRTGDITVILSDPCGC 319 (438)
T ss_pred ccccCCccccccc-----ccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEeccccCcceEEEEcCCeeEecccCCCC
Confidence 9986664222221 1123445577889999999999999999999999874311111345799999998773
Q ss_pred -----------Ccee--eEeeeeeeChhhHHHHHhcCCCcc
Q 014435 391 -----------DHND--FFCKLFQVAPAELEGLLVSHPEIL 418 (424)
Q Consensus 391 -----------g~~d--i~~~G~~v~~~~iE~~l~~~p~V~ 418 (424)
|+.| +.+.|.+|+|..||.+|.+.+.+.
T Consensus 320 Gr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~ 360 (438)
T COG1541 320 GRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVT 360 (438)
T ss_pred CCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCC
Confidence 2333 888999999999999999999987
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.84 E-value=3e-20 Score=184.55 Aligned_cols=390 Identities=15% Similarity=0.064 Sum_probs=234.0
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCC----HHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT----VSELS 89 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~----~~~i~ 89 (424)
+..+.-..-++.||++....++.+++.|...|..+|+.|++++..+.++++..++.+++|..+++++|.++ ++.+.
T Consensus 59 p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~ 138 (1032)
T KOG1178|consen 59 PTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLM 138 (1032)
T ss_pred ecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHH
Confidence 33333344567899999999999999999999999999999999999999999999999999999999999 22221
Q ss_pred HHHHhcC-CeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCC-CCCCCCCCCCCCEEEE
Q 014435 90 KQVKDSN-PKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV-TDIPDVSVKQTDAAAL 167 (424)
Q Consensus 90 ~~l~~~~-~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 167 (424)
.+..... ...-+........+...... ....+....+.++.-... ....-....++..+.+
T Consensus 139 ~ia~~~~s~~~~i~~~l~i~~~~~~~~~-----------------~~~sv~~~~~~f~~~~~~~~~r~~~~~~~ds~~~l 201 (1032)
T KOG1178|consen 139 RIAHFLTSVELEIVRRLNIIDILLNSLF-----------------PKLSVETIADSFQMVLHNEDTREIRVGGNDSTALL 201 (1032)
T ss_pred hhhhhheeccceehhhhhhHHHHhhccc-----------------cccchhhccchhhhhhccCCCcceeeecccccceE
Confidence 1111110 00111111000000000000 000000011111111110 1111223456778999
Q ss_pred ecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHH
Q 014435 168 LYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEM 244 (424)
Q Consensus 168 ~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~ 244 (424)
.||||+||.||+|..+|..+.....+........ .++++-.....+............|..|..+..+.. -++.+
T Consensus 202 ~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t--~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~ 279 (1032)
T KOG1178|consen 202 SFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPT--GSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQ 279 (1032)
T ss_pred eecccccccccccchhHHHHHhhhhhccccCCcC--ccchhhhhheeecccchHHHHhhHhhcCceeecccccCccchhh
Confidence 9999999999999999999988766554443222 224331111111111221233344555655555533 24799
Q ss_pred HHHHHHHccceEEEechHHHHHHHhccccc-------------cCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEec
Q 014435 245 ALRAIEKYRVTVWWVVPPIILALAKNSLVR-------------KFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 311 (424)
Q Consensus 245 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-------------~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 311 (424)
+.+.+++++++..+.+|++.++++...... ....+.||....+|++....+...+.+.+...-...-
T Consensus 280 l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~ 359 (1032)
T KOG1178|consen 280 LASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLP 359 (1032)
T ss_pred HHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccceeeeec
Confidence 999999999999999999987776643321 1123478999999999999988866665542223333
Q ss_pred ccCccCCCceeecCCCCCc--cCCCccccccCC-------cEEEEeeCCCCccCCCCCc----eeEEEecCCcchhh---
Q 014435 312 YGMTETCAPISLENPLVGV--RRSGSAGTLVAG-------VEAQIVSVDTLKPLPPNQL----GEIWVRGPNVTPVF--- 375 (424)
Q Consensus 312 yG~tE~~~~~~~~~~~~~~--~~~~~~G~~~~~-------~~~~i~d~~~~~~~~~g~~----Gel~v~~~~~~~gy--- 375 (424)
|+.++..+........... .....+..+..+ .-..+.. ..+.+.+.+.. |.-+..+.++..||
T Consensus 360 y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~g~~~~ 438 (1032)
T KOG1178|consen 360 YLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLY-RAGGEGEGGVGKGCLGAEQNLSSWVVDGYSTP 438 (1032)
T ss_pred ccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeee-ccCcccCCcccceeecccccccceeeccccch
Confidence 8888876655542222110 000011111111 1122222 23333332222 22223334445554
Q ss_pred --------------hhccccCceEEEecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceec
Q 014435 376 --------------ELTVNCNLFSYFRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 376 --------------~~~~~TgD~g~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~ 423 (424)
+..|+|||+|+.-.+|.+ | ++.+|+++...+|+.++..||.|+++.+.
T Consensus 439 ~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl 508 (1032)
T KOG1178|consen 439 ENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDVKEAITL 508 (1032)
T ss_pred hhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCcchhhhhee
Confidence 455699999998888766 4 99999999999999999999999998764
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.69 E-value=6.8e-16 Score=149.96 Aligned_cols=402 Identities=16% Similarity=0.189 Sum_probs=262.4
Q ss_pred CCCCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHH-HHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecC
Q 014435 3 KSGYGRDGIYRSLRPPLVLPSDPSFSMFKSIVIKVSH-SFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTA 79 (424)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~-~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l 79 (424)
||+-+..+++-+++.- ...+||..+..++.++|+ .|-+-|++++|+|.+++..+ .++++..++|..+|..++|+
T Consensus 106 hs~~~ta~i~id~kgk---~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~ 182 (1363)
T KOG3628|consen 106 HSATSTAHICIDKKGK---ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPL 182 (1363)
T ss_pred CCCCCceEEEEcCCCc---eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeeccc
Confidence 4444455555544441 557999999999999999 67777999999999988776 99999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCC
Q 014435 80 NPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSV 159 (424)
Q Consensus 80 ~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (424)
.+..+.+++..+++..+.+++++....+..+.....+.-. .....+....++...... +....+..
T Consensus 183 ~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~-------------~k~v~~w~t~~~k~~~~~-~k~~~P~~ 248 (1363)
T KOG3628|consen 183 SELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSL-------------AKAVAWWKTNDFKGNYTK-DKIKKPRM 248 (1363)
T ss_pred hhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccH-------------HHHHHhhhcccccceeeh-hhccCCce
Confidence 9999999999999999999999988776665543311000 000000011111100000 11111112
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhh------------------hccCCCcEEEEecchHHHHHHH
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE------------------LVGELDHVVLCVLPMFHVFGLS 221 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~p~~~~~g~~ 221 (424)
.-. ..+|-||.+++|.--+++.+|+ +..+.+.+..... ..-..++.++.........|+.
T Consensus 249 ~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGli 326 (1363)
T KOG3628|consen 249 QLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLI 326 (1363)
T ss_pred eee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchh
Confidence 222 6889999999998888888876 3332222111100 1112236667777778888998
Q ss_pred HHHHHHhhcCceEEecCC---CCHHHHHHHHHHccceEEEechHHHHHHHhc-----------cccccCCCCCeeEEEec
Q 014435 222 VILYDQLQKGNCVVSMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKN-----------SLVRKFDISSLKLVGSG 287 (424)
Q Consensus 222 ~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-----------~~~~~~~~~~lr~~~~~ 287 (424)
..++.+++.|.|.+..++ ..|..+.+++-+++.+++..--..+.+.... .+.+..+++++|.+++.
T Consensus 327 lGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~Vt 406 (1363)
T KOG3628|consen 327 LGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCMVT 406 (1363)
T ss_pred hhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceeeeEEe
Confidence 889999999999999987 6788999999999999987654333332211 11122468899999998
Q ss_pred CCCCCHHHHHHHHHhC----CC--Ce---------------EEecccCccCCCceeecCCCCC-----------------
Q 014435 288 AAPLGKELMEDCQKNI----PG--AT---------------IFQGYGMTETCAPISLENPLVG----------------- 329 (424)
Q Consensus 288 g~~~~~~~~~~~~~~~----~~--~~---------------~~~~yG~tE~~~~~~~~~~~~~----------------- 329 (424)
-..+..+..+-..+.+ +. .+ ....=+++|.+...-..+....
T Consensus 407 c~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~ 486 (1363)
T KOG3628|consen 407 CTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLN 486 (1363)
T ss_pred eeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccc
Confidence 8888876655444432 10 11 1112233454433222222110
Q ss_pred -----------ccCCCccccccCC-cEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------h--------------
Q 014435 330 -----------VRRSGSAGTLVAG-VEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------E-------------- 376 (424)
Q Consensus 330 -----------~~~~~~~G~~~~~-~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------~-------------- 376 (424)
......+|+..++ +.+.++++++.+.+.++++|||||.++++...| +
T Consensus 487 ~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~ 566 (1363)
T KOG3628|consen 487 EVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKP 566 (1363)
T ss_pred eEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEEeeeccccCCC
Confidence 1111135665555 566788888899999999999999999998888 1
Q ss_pred ----hccccCceEEEecCCce------e--eEeeeeeeCh----------hhHHHHHhcCCCcccceec
Q 014435 377 ----LTVNCNLFSYFRSNDHN------D--FFCKLFQVAP----------AELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 377 ----~~~~TgD~g~~~~~g~~------d--i~~~G~~v~~----------~~iE~~l~~~p~V~~a~v~ 423 (424)
.+.|||-+|++++++.+ | ....|...+. +.++.+++..+.|.++++|
T Consensus 567 ~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf 635 (1363)
T KOG3628|consen 567 PSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAF 635 (1363)
T ss_pred CccchhhhhcceeeeeCCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeee
Confidence 12299999999998876 3 3344544333 3456677788888888876
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.62 E-value=5.9e-14 Score=130.89 Aligned_cols=232 Identities=15% Similarity=0.022 Sum_probs=142.9
Q ss_pred EEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhh-ccCCCcEEEEe--cchHHHHHHHHHHHHHhhcCce-EEecC-C
Q 014435 165 AALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL-VGELDHVVLCV--LPMFHVFGLSVILYDQLQKGNC-VVSMG-K 239 (424)
Q Consensus 165 ~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~p~~~~~g~~~~~~~~l~~G~~-~~~~~-~ 239 (424)
..+..||||||.|-.+..+................. .....+++... .+. +.+. .+..... +-..+ .
T Consensus 102 ~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly~-------~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 102 ISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLYQ-------SVNNRWISLDFFDLL 173 (430)
T ss_pred EEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHHH-------HHHhccceeeecCCC
Confidence 556779999999999988888664443322221111 11111333322 222 2121 1111111 11111 1
Q ss_pred CCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCC
Q 014435 240 FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCA 319 (424)
Q Consensus 240 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 319 (424)
.+.+.+++.|++++|+++.++|+.+..|++.....+.+ .++|.++++||.+++...+.+++.| |+++++.||+|| |.
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~ 250 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GF 250 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hh
Confidence 46899999999999999999999999999865544433 4789999999999999999999999 699999999999 54
Q ss_pred ceeecCCCCCccCCCccccccCCcEEE--EeeCCCCccCCCCCceeEEEecCCcchhhhhccccCceEEEecC----C--
Q 014435 320 PISLENPLVGVRRSGSAGTLVAGVEAQ--IVSVDTLKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSN----D-- 391 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G~~~~~~~~~--i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~----g-- 391 (424)
++..+ .. +....--..+.++ ++|+ +++ ++.++++-.-..----.|+|||++.+.++ |
T Consensus 251 la~eC-~~------g~lHl~ed~~~vE~~ivD~-~~~-------~~~ViT~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~ 315 (430)
T TIGR02304 251 LASTC-RC------GTLHLNEDLVHIEKQYLDE-HKR-------FVPIITDFTRTTQPIVRYRLNDILVESEQPCSCGSA 315 (430)
T ss_pred eEEec-CC------CCEEEccccEEEEeeEECC-CCc-------eEEEEecCCCccceEEeeeCCCEEEeCCCCCCCCCc
Confidence 43322 11 2222222334444 7884 443 34466653211111345799999887543 2
Q ss_pred ---------ce-e-eE---eeeee--eChhhHHHHH-hcCCCccccee
Q 014435 392 ---------HN-D-FF---CKLFQ--VAPAELEGLL-VSHPEILDAVV 422 (424)
Q Consensus 392 ---------~~-d-i~---~~G~~--v~~~~iE~~l-~~~p~V~~a~v 422 (424)
+. | +. .+|.. |+|..++.++ ...++|.+.-+
T Consensus 316 ~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi 363 (430)
T TIGR02304 316 TMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRV 363 (430)
T ss_pred ccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEE
Confidence 22 3 43 24544 5999998885 45788877644
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.25 E-value=7.1e-10 Score=101.33 Aligned_cols=219 Identities=17% Similarity=0.148 Sum_probs=133.9
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccC---CCcEEEEecchHHHH-HH---HHHHHHHhhcCce
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE---LDHVVLCVLPMFHVF-GL---SVILYDQLQKGNC 233 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~-g~---~~~~~~~l~~G~~ 233 (424)
++++..++.||||||.|--+.+.+..+......+....+.... ..-.++...|..... .+ ....+..+..+..
T Consensus 88 ~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (365)
T PF04443_consen 88 EEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSR 167 (365)
T ss_pred hhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCce
Confidence 5667788999999999866777666555554444333331111 112333333332111 11 1122333445555
Q ss_pred EEecC-CCCHHHHHHHHH----HccceEEEechHHHHHHHhccccccC--CCC-CeeEEEecC------CCCC-HHHHHH
Q 014435 234 VVSMG-KFDIEMALRAIE----KYRVTVWWVVPPIILALAKNSLVRKF--DIS-SLKLVGSGA------APLG-KELMED 298 (424)
Q Consensus 234 ~~~~~-~~~~~~~~~~i~----~~~~t~~~~~p~~~~~l~~~~~~~~~--~~~-~lr~~~~~g------~~~~-~~~~~~ 298 (424)
..+.. .++.+.++..+. +.++..++++|.++..++......+. .++ ..+.+-.|| +.++ .++.+.
T Consensus 168 ~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~~ 247 (365)
T PF04443_consen 168 FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYAR 247 (365)
T ss_pred eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHHH
Confidence 44432 367777777665 45789999999987777665443332 333 455666665 4565 577788
Q ss_pred HHHhCCC---CeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh
Q 014435 299 CQKNIPG---ATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF 375 (424)
Q Consensus 299 ~~~~~~~---~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy 375 (424)
+.+.|+. ..+++.|||||.....+..... ..+.|-- +.|.|+++.++++.|+.|-|.+-.+... .|
T Consensus 248 l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~---------~~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~~-s~ 316 (365)
T PF04443_consen 248 LQEVFGVIPIENIYDMYGMTELNSQAYECGHG---------HFHVPPW-VIIRDPETLEPLPPGETGLIQVIDLANT-SY 316 (365)
T ss_pred HHHHHCCCCHHHeeeeeeccccchhheeCCCC---------cccCCCe-EEEECCCCCcCCCCCCeeEEEEEccccc-CC
Confidence 8887842 3899999999976544432111 1122222 7777999999999999999998877543 34
Q ss_pred hhccccCceEEEecC
Q 014435 376 ELTVNCNLFSYFRSN 390 (424)
Q Consensus 376 ~~~~~TgD~g~~~~~ 390 (424)
-+.+-|.|+|.+..+
T Consensus 317 p~~IlTeDlGvl~~~ 331 (365)
T PF04443_consen 317 PGFILTEDLGVLHGD 331 (365)
T ss_pred CcEEEEcceeeecCC
Confidence 344789999987664
No 132
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.60 E-value=3e-08 Score=90.81 Aligned_cols=47 Identities=19% Similarity=0.102 Sum_probs=42.7
Q ss_pred hhccccCceEEE-ecCCce---e-eEeee---eeeChhhHHHHHhcCCCcccceecC
Q 014435 376 ELTVNCNLFSYF-RSNDHN---D-FFCKL---FQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 376 ~~~~~TgD~g~~-~~~g~~---d-i~~~G---~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||+|||+|++ |++|++ + .+ +| ++|+|. ||++|.+||+|.||+|+|
T Consensus 208 dgW~~TGDlg~~~d~dG~l~~~gR~~-~G~~i~nV~p~-IE~~L~~hp~V~eaaVvg 262 (365)
T PRK09188 208 RIWLATGKKVYNFITRGLFSWSDGEG-TGDRIDNEAPA-IQAALKSDPAVSDVAIAL 262 (365)
T ss_pred CcEEeCCCEEEEEcCCCeEEEEecCc-CCcCceeeCHH-HHHHHHhCCCccEEEEEE
Confidence 789999999998 699988 3 55 77 799999 999999999999999986
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=97.65 E-value=0.00011 Score=71.57 Aligned_cols=126 Identities=13% Similarity=0.043 Sum_probs=69.1
Q ss_pred CCCeeEEEecCCCCCHHHHHHHHHhCCCCeEE-ecccCccCCCceeecCCCCCccCCCccccccCC-cEEEEeeCCC---
Q 014435 278 ISSLKLVGSGAAPLGKELMEDCQKNIPGATIF-QGYGMTETCAPISLENPLVGVRRSGSAGTLVAG-VEAQIVSVDT--- 352 (424)
Q Consensus 278 ~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~i~d~~~--- 352 (424)
.++|+.+.+.+..-.....+++++.+++..++ ..|++||+ .+.....+. . ..+...++ .-.+-++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~~~~----~--~~~~l~~~~~ffEFip~~~~~~ 338 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPLDPE----D--PGYVLAPDSGFFEFIPVDEDEQ 338 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES-CC----C----EEE-TTSSEEEEEE-STT--
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEecCCC----C--CceEeecCCeEEEEEeccCCcc
Confidence 68999776666555567778888888775554 57999994 333322111 1 11222222 1334444322
Q ss_pred -----C-----ccCCCCCceeEEEecCCcchhhhhccccCceEEEec--CC--ce------e--eEeeeeeeChhhHHHH
Q 014435 353 -----L-----KPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRS--ND--HN------D--FFCKLFQVAPAELEGL 410 (424)
Q Consensus 353 -----~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~--~g--~~------d--i~~~G~~v~~~~iE~~ 410 (424)
. ..+..|+..||.++..+- --.|+.||+.++.. ++ .+ + +.+.|++++-.+|+++
T Consensus 339 ~~~~~~~~l~~~ele~G~~YelviTt~~G----LyRY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~a 414 (528)
T PF03321_consen 339 NPSEQPKTLLLHELEVGEEYELVITTNSG----LYRYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEA 414 (528)
T ss_dssp -----SSSEEGGG--TT-EEEEEEESTTS-----SSEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHH
T ss_pred cccCCCceecHHHhcCCCeEEEEEecccc----eeeeecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHH
Confidence 2 235788999999987641 12469999998742 22 12 2 7789999999999999
Q ss_pred HhcC
Q 014435 411 LVSH 414 (424)
Q Consensus 411 l~~~ 414 (424)
+.+.
T Consensus 415 v~~~ 418 (528)
T PF03321_consen 415 VARA 418 (528)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9664
No 134
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.36 E-value=0.0091 Score=58.19 Aligned_cols=128 Identities=13% Similarity=0.013 Sum_probs=76.3
Q ss_pred CCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEec-ccCccCCCceeecCCCCCccCCCcc-ccccCCcE-EEEeeCC--C
Q 014435 278 ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG-YGMTETCAPISLENPLVGVRRSGSA-GTLVAGVE-AQIVSVD--T 352 (424)
Q Consensus 278 ~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-yG~tE~~~~~~~~~~~~~~~~~~~~-G~~~~~~~-~~i~d~~--~ 352 (424)
.+++|+|.+....-.......++..++|+.++.. |++||+.. ...-.|. ..+..+ ...+|+.. .+-++.+ +
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~-ginl~P~---~~p~~~sy~L~p~~~yFEFip~~~~~ 378 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYF-GVNLNPL---CKPSEVSYTLIPTMAYFEFLPVHRNN 378 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEE-EeccCCC---CCcccceeeecCCcEEEEEeeccCcc
Confidence 5788888766655667777788777778877764 99999433 3322222 111112 22233322 2333211 1
Q ss_pred -----------------C-----ccCCCCCceeEEEecCCcchhhhhccccCceEEEec----CCce------e--eEee
Q 014435 353 -----------------L-----KPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRS----NDHN------D--FFCK 398 (424)
Q Consensus 353 -----------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~----~g~~------d--i~~~ 398 (424)
+ ..+..|+.-|++|+... | --+|+.||+.++.. .-.+ + ..+.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~---G-LyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~ 454 (612)
T PLN02620 379 GVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYA---G-LYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSID 454 (612)
T ss_pred cccccccccccccccccCccccHHHccCCCeEEEEEEecC---c-eEEEecCCEEEEeeecCCCceEEEEeecCceeecc
Confidence 1 12578889999998643 1 12469999987642 1122 2 5678
Q ss_pred eeeeChhhHHHHHhc
Q 014435 399 LFQVAPAELEGLLVS 413 (424)
Q Consensus 399 G~~v~~~~iE~~l~~ 413 (424)
|+|.+-.++-.++.+
T Consensus 455 gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 455 SDKTDEVELQNAVKN 469 (612)
T ss_pred cccCCHHHHHHHHHH
Confidence 999999888877754
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.31 E-value=0.021 Score=55.83 Aligned_cols=129 Identities=11% Similarity=-0.006 Sum_probs=77.4
Q ss_pred CCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEe-cccCccCCCceeecCCCCCccCCCccccccCCcE-EEEeeCCCC--
Q 014435 278 ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ-GYGMTETCAPISLENPLVGVRRSGSAGTLVAGVE-AQIVSVDTL-- 353 (424)
Q Consensus 278 ~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~i~d~~~~-- 353 (424)
.+++|+|.+....-.......++..++|+.++. .|++||+.. ...-.+. ..........+|+.. .+-++.+++
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~-ginl~p~--~~p~~~sy~L~p~~~yFEFip~~~~~~ 368 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYF-GINLKPL--SDPSDVSYTLLPNMAYFEFLPVDKNNG 368 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEE-EeccCcC--CCccCCceeecCCcEEEEEeecCCCcc
Confidence 578898877655566777788888788887776 599999433 2222221 001111222333322 233321111
Q ss_pred ---------------------------ccCCCCCceeEEEecCCcchhhhhccccCceEEEec----CCce------e--
Q 014435 354 ---------------------------KPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRS----NDHN------D-- 394 (424)
Q Consensus 354 ---------------------------~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~----~g~~------d-- 394 (424)
..+..|+.-||+|+... | --+||.||+.++.. --.+ +
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~---G-LYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~v 444 (606)
T PLN02247 369 EVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFT---G-LYRYRVGDILMVTGFYNNAPQFRFVQRRNVV 444 (606)
T ss_pred cccccccccccccccccccccCceecHHHccCCCeEEEEEEecC---c-eEEEecCCEEEEeeecCCCceEEEEecCCce
Confidence 13578888999998642 1 12469999987641 1112 2
Q ss_pred eEeeeeeeChhhHHHHHhc
Q 014435 395 FFCKLFQVAPAELEGLLVS 413 (424)
Q Consensus 395 i~~~G~~v~~~~iE~~l~~ 413 (424)
..+.|+|.+-.++-.++.+
T Consensus 445 lsi~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 445 LSIDTDKTNEEDLLKAVTQ 463 (606)
T ss_pred eecccccCCHHHHHHHHHH
Confidence 5679999999988877755
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.16 E-value=0.035 Score=54.68 Aligned_cols=125 Identities=9% Similarity=-0.016 Sum_probs=72.1
Q ss_pred CCCe---eEEEecCCCCCHHHHHHHHHhCCCCe-EEecccCccCCCceeecCCCCCccCCCccccc--cCCcEEEEeeCC
Q 014435 278 ISSL---KLVGSGAAPLGKELMEDCQKNIPGAT-IFQGYGMTETCAPISLENPLVGVRRSGSAGTL--VAGVEAQIVSVD 351 (424)
Q Consensus 278 ~~~l---r~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~--~~~~~~~i~d~~ 351 (424)
.+++ ..+..||.. .....++..+++.. +...|++||+. +.....+. ..+...+.. ..++-.+-++.+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~-~gi~~~~~---~~p~~~~~~l~~~~~ffEFiP~~ 373 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESY-FGINLNPM---CKPSEVSYTIMPNMAYFEFLPHN 373 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceE-EEeecCCC---CCCCCcceEecCCcEEEEeeecc
Confidence 5774 445555543 66677777776654 44679999943 33322211 111111111 123334444311
Q ss_pred -C------------CccCCCCCceeEEEecCCcchhhhhccccCceEEEecCC----ce------e--eEeeeeeeChhh
Q 014435 352 -T------------LKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSND----HN------D--FFCKLFQVAPAE 406 (424)
Q Consensus 352 -~------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~g----~~------d--i~~~G~~v~~~~ 406 (424)
. -..+..|+.-||+|+..+- -=+|+.||+.++..-- .+ + +++.|++++-.+
T Consensus 374 ~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~G----LyRY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~ 449 (597)
T PLN02249 374 HDGDGALDETSLVELADVEVGKEYELVITTYAG----LYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEAD 449 (597)
T ss_pred cCCcccCCCCcEecHHHcCCCCeEEEEEEcccc----eeEeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHH
Confidence 1 1235788889999986431 1236999999875321 11 2 778999999999
Q ss_pred HHHHHhc
Q 014435 407 LEGLLVS 413 (424)
Q Consensus 407 iE~~l~~ 413 (424)
++.++.+
T Consensus 450 v~~Av~~ 456 (597)
T PLN02249 450 LQKAVEN 456 (597)
T ss_pred HHHHHHH
Confidence 9998866
No 137
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=96.23 E-value=0.039 Score=51.50 Aligned_cols=88 Identities=16% Similarity=0.064 Sum_probs=72.4
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
-+|+.+...-+..+|+.|...|..+||+|..+..-+ ..-+-..+|+.++|+.++|+.+... +.-..+++++++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~-~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNT-ERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccH-HHHHHHHHhcCCcEEE
Confidence 389999999999999999999999999988876621 1226788999999999999988544 4456788999999999
Q ss_pred EcccchHHHhc
Q 014435 102 TVPELWDKVKD 112 (424)
Q Consensus 102 ~~~~~~~~~~~ 112 (424)
+.+++...+.+
T Consensus 188 ~tps~~l~lae 198 (438)
T COG1541 188 ATPSYLLYLAE 198 (438)
T ss_pred EChHHHHHHHH
Confidence 99887665443
No 138
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=91.79 E-value=1.7 Score=41.44 Aligned_cols=85 Identities=12% Similarity=0.091 Sum_probs=65.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|..++......++..+...|++++|++....+.+. ......+++...|+.++++++.. .+.+...+++.++++++.
T Consensus 95 ~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~~ 173 (422)
T TIGR02155 95 YTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIMV 173 (422)
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEEE
Confidence 688888777777777888889999998877655442 22334677889999999887754 577889999999999999
Q ss_pred cccchHHH
Q 014435 103 VPELWDKV 110 (424)
Q Consensus 103 ~~~~~~~~ 110 (424)
.+.....+
T Consensus 174 ~Ps~l~~L 181 (422)
T TIGR02155 174 TPSYMLNL 181 (422)
T ss_pred cHHHHHHH
Confidence 88766544
No 139
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=91.48 E-value=2.3 Score=41.00 Aligned_cols=79 Identities=15% Similarity=0.149 Sum_probs=61.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc--HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|..++...+...+..+...|++++|++.+..+.+.. .....+++...|+.+++... ......++++.++.+++.
T Consensus 106 ~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~~ 182 (445)
T TIGR03335 106 LTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIVA 182 (445)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEEE
Confidence 7999999888888888888899999999998776543 23456788899998887653 234567889999999887
Q ss_pred cccc
Q 014435 103 VPEL 106 (424)
Q Consensus 103 ~~~~ 106 (424)
.+..
T Consensus 183 ~ps~ 186 (445)
T TIGR03335 183 SVFK 186 (445)
T ss_pred CHHH
Confidence 6543
No 140
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=83.81 E-value=5.4 Score=39.04 Aligned_cols=85 Identities=15% Similarity=0.194 Sum_probs=64.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|+..+...+..+.. ..++++++++....|.. ..+...+++++..|+.+++. +..+++.+...+++.++.++..
T Consensus 186 ~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~ 261 (513)
T PRK07656 186 LTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVLPG 261 (513)
T ss_pred EecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEEec
Confidence 688888765555443 34788999998887754 33455678999999998875 5568899999999999999999
Q ss_pred cccchHHHhcC
Q 014435 103 VPELWDKVKDL 113 (424)
Q Consensus 103 ~~~~~~~~~~~ 113 (424)
.+..+..+...
T Consensus 262 ~p~~~~~l~~~ 272 (513)
T PRK07656 262 PPTMYNSLLQH 272 (513)
T ss_pred hHHHHHHHHcC
Confidence 88877666543
No 141
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=82.04 E-value=12 Score=36.53 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=64.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|++.+......... ..+++++|++....|....+ +...++++..|+.++..+.. +.+.+...+++.++..+++.
T Consensus 187 ~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~ 262 (521)
T PRK06187 187 LSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFAV 262 (521)
T ss_pred eehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEch
Confidence 688887766655544 45788999988887765332 33445588899998877665 88999999999999999998
Q ss_pred ccchHHHhcC
Q 014435 104 PELWDKVKDL 113 (424)
Q Consensus 104 ~~~~~~~~~~ 113 (424)
+.....+...
T Consensus 263 p~~~~~l~~~ 272 (521)
T PRK06187 263 PTIWQMLLKA 272 (521)
T ss_pred HHHHHHHHcC
Confidence 8877766543
No 142
>PRK08315 AMP-binding domain protein; Validated
Probab=80.10 E-value=12 Score=37.26 Aligned_cols=83 Identities=12% Similarity=0.097 Sum_probs=62.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--CccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|++.+...+..+.. ..+++++|++....|- ...++..+++.+..|+..+......++..+...+++.+++++..
T Consensus 219 ~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~ 295 (559)
T PRK08315 219 LTHRNILNNGYFIGE---AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYG 295 (559)
T ss_pred eeHHHHHHHHHHHHH---hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEec
Confidence 678777655554443 3478999998887775 34555667888999998886666678888999999999999988
Q ss_pred cccchHHH
Q 014435 103 VPELWDKV 110 (424)
Q Consensus 103 ~~~~~~~~ 110 (424)
.+..+..+
T Consensus 296 ~P~~~~~~ 303 (559)
T PRK08315 296 VPTMFIAE 303 (559)
T ss_pred chHHHHHH
Confidence 77655433
No 143
>PRK12583 acyl-CoA synthetase; Provisional
Probab=78.73 E-value=16 Score=36.19 Aligned_cols=83 Identities=19% Similarity=0.237 Sum_probs=61.7
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--CccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+|++.+...+..+... .+++++|++....|- ....+..+++++..|+.++.......+..+...+++.+++.++
T Consensus 220 ~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~ 296 (558)
T PRK12583 220 TLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALY 296 (558)
T ss_pred EeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEe
Confidence 37888886655554443 378899988877664 3556677788888999888555566788888999999999998
Q ss_pred EcccchHH
Q 014435 102 TVPELWDK 109 (424)
Q Consensus 102 ~~~~~~~~ 109 (424)
..+..+..
T Consensus 297 ~~P~~~~~ 304 (558)
T PRK12583 297 GVPTMFIA 304 (558)
T ss_pred ccHHHHHH
Confidence 88766543
No 144
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=77.08 E-value=18 Score=35.33 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=64.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|+..+...+......+ ++.++|++...+|-... .+..+++++..|+..+..+ ...++.+...+++.++.++...
T Consensus 181 ~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 256 (515)
T TIGR03098 181 LSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGLAAV 256 (515)
T ss_pred EecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceEecC
Confidence 68888877666555443 57889999888886543 2445678889999998664 5678899999999999999999
Q ss_pred ccchHHHhc
Q 014435 104 PELWDKVKD 112 (424)
Q Consensus 104 ~~~~~~~~~ 112 (424)
+..+..+..
T Consensus 257 P~~~~~l~~ 265 (515)
T TIGR03098 257 PPLWAQLAQ 265 (515)
T ss_pred hHHHHHHHh
Confidence 887766654
No 145
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=76.72 E-value=12 Score=32.11 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=44.3
Q ss_pred HHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCC
Q 014435 42 RHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNP 97 (424)
Q Consensus 42 ~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~ 97 (424)
...|+.++|++. ..|-.. -+...+++++..|++.+.. ++++++.+...+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 566899999998 887653 3445689999999999988 68999999999988876
No 146
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=75.46 E-value=21 Score=35.36 Aligned_cols=84 Identities=13% Similarity=0.176 Sum_probs=61.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|++.+........ ...++.++|++....|-. ..+...++..+..|+.++.......++.+...+++.++.++..
T Consensus 203 ~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~ 279 (539)
T PRK06334 203 LTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGS 279 (539)
T ss_pred EcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEe
Confidence 68888876544433 345778899888877743 3333446777888988877655678899999999999999999
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 280 ~P~~~~~l~ 288 (539)
T PRK06334 280 TPVFFDYIL 288 (539)
T ss_pred cHHHHHHHH
Confidence 887766553
No 147
>PLN03051 acyl-activating enzyme; Provisional
Probab=75.07 E-value=18 Score=35.39 Aligned_cols=84 Identities=15% Similarity=0.039 Sum_probs=59.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|++.+...+... ....++.++|++....|-+.. .+..+++++..|+.++..+.....+.+...+++.++.++...
T Consensus 139 ~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~v 215 (499)
T PLN03051 139 WTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLV 215 (499)
T ss_pred EccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeC
Confidence 5777665543322 234578889987766664432 234577888999999887655567889999999999999998
Q ss_pred ccchHHHh
Q 014435 104 PELWDKVK 111 (424)
Q Consensus 104 ~~~~~~~~ 111 (424)
+..+..+.
T Consensus 216 P~~~~~l~ 223 (499)
T PLN03051 216 PSIVKAWR 223 (499)
T ss_pred HHHHHHHH
Confidence 87766554
No 148
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=73.73 E-value=18 Score=33.63 Aligned_cols=63 Identities=19% Similarity=0.214 Sum_probs=48.3
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 014435 37 VSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 37 ~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+.-.|+..+|++||-|.+ .+.-|+...-+++..|+.+|.+|-+ .+++.++..+... .++|+.-
T Consensus 62 L~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 62 LHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 334556668999995443 4778999999999999999988753 5788898888775 6777664
No 149
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=73.72 E-value=26 Score=33.53 Aligned_cols=88 Identities=13% Similarity=0.181 Sum_probs=66.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC--CCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAP--NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~--~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 99 (424)
.-++|--++..++..++..+ |+...+++++-.| .+.-.++..+|++..|++.+.-.|...+....+.+.+.++..
T Consensus 251 gatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~ 327 (596)
T KOG1177|consen 251 GATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTT 327 (596)
T ss_pred ceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEE
Confidence 34688888888887776554 6665444444332 235556778889999999999999999999999999999999
Q ss_pred EEEcccchHHHhc
Q 014435 100 VITVPELWDKVKD 112 (424)
Q Consensus 100 ii~~~~~~~~~~~ 112 (424)
++..+.-+..+..
T Consensus 328 l~gtPtM~~Dlln 340 (596)
T KOG1177|consen 328 LYGTPTMFVDLLN 340 (596)
T ss_pred EecChHHHHHHhc
Confidence 9999866555443
No 150
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=71.86 E-value=21 Score=35.57 Aligned_cols=85 Identities=11% Similarity=0.010 Sum_probs=62.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc--HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|++.+...+.. .....+++++|++....+.... ....+++.+..|+..+......+++.+...+++.+++++..
T Consensus 225 ~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~ 301 (570)
T PRK04319 225 HVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYT 301 (570)
T ss_pred EecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEe
Confidence 577777554333 3344578889977666554422 34567788899999888777788999999999999999999
Q ss_pred cccchHHHhc
Q 014435 103 VPELWDKVKD 112 (424)
Q Consensus 103 ~~~~~~~~~~ 112 (424)
.+..+..+..
T Consensus 302 ~P~~~~~l~~ 311 (570)
T PRK04319 302 APTAIRMLMG 311 (570)
T ss_pred CHHHHHHHHh
Confidence 8887766643
No 151
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=71.77 E-value=17 Score=34.54 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=61.9
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
.+|++.+...+..+...+ +++++|++....|-... .+..+++++..|+..+..++. +.+...+++.++.++..
T Consensus 130 ~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~~ 203 (436)
T TIGR01923 130 PHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHISL 203 (436)
T ss_pred EEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEEe
Confidence 378999887776666544 78899998887775422 223467888899998887643 48888999999999999
Q ss_pred cccchHHHhc
Q 014435 103 VPELWDKVKD 112 (424)
Q Consensus 103 ~~~~~~~~~~ 112 (424)
.+..+..+..
T Consensus 204 ~P~~l~~l~~ 213 (436)
T TIGR01923 204 VPTQLNRLLD 213 (436)
T ss_pred HHHHHHHHHh
Confidence 8877665544
No 152
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=70.28 E-value=38 Score=31.81 Aligned_cols=85 Identities=15% Similarity=0.176 Sum_probs=64.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCCCC--HHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYT--VSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~--~~~i~~~l~~~~~~~ii 101 (424)
+|++.+...+..+.. ..+++++|++....|.... .+..++..+..|+..+..+.... +..+..+++..+++.++
T Consensus 140 ~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~ 216 (408)
T TIGR01733 140 VTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLN 216 (408)
T ss_pred eccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEE
Confidence 588888766665554 3467788988887776544 45567888888988887776554 68889999999999999
Q ss_pred EcccchHHHhc
Q 014435 102 TVPELWDKVKD 112 (424)
Q Consensus 102 ~~~~~~~~~~~ 112 (424)
..+..+..+..
T Consensus 217 ~~p~~~~~l~~ 227 (408)
T TIGR01733 217 LTPSLLALLAA 227 (408)
T ss_pred eCHHHHHHHHH
Confidence 98887766554
No 153
>PRK06188 acyl-CoA synthetase; Validated
Probab=66.11 E-value=50 Score=32.43 Aligned_cols=84 Identities=12% Similarity=0.141 Sum_probs=63.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+|+..+...+.. .....++..++++....|-+..+...+++.+..|+..+..+. ..+..+...+++.++.++...+
T Consensus 188 ~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P 263 (524)
T PRK06188 188 GTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATFLVP 263 (524)
T ss_pred eehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEEehH
Confidence 677776655443 334457888999988888776666667788888998887754 5788899999999999999988
Q ss_pred cchHHHhc
Q 014435 105 ELWDKVKD 112 (424)
Q Consensus 105 ~~~~~~~~ 112 (424)
..+..+..
T Consensus 264 ~~l~~l~~ 271 (524)
T PRK06188 264 TMIYALLD 271 (524)
T ss_pred HHHHHHHh
Confidence 76655443
No 154
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=66.05 E-value=58 Score=30.69 Aligned_cols=90 Identities=17% Similarity=0.131 Sum_probs=64.1
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
.+|.++++. + ....+|++.+...+..+........ ..++++....+-.. .+...+++++..|+..+..+
T Consensus 8 ~pd~~a~~~------~--~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~--~~~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 8 YPDRIALID------D--EGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSI--EFVVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp STTSEEEEE------T--TTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSH--HHHHHHHHHHHTT-EEEEEE
T ss_pred CCCceEEEE------C--CCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccc--eeeeeecccccccccccccc
Confidence 467778776 1 2235788888888877776665422 23477777666643 33356788888899888875
Q ss_pred -CCCHHHHHHHHHHccceEEEe
Q 014435 239 -KFDIEMALRAIEKYRVTVWWV 259 (424)
Q Consensus 239 -~~~~~~~~~~i~~~~~t~~~~ 259 (424)
....+.+...+++.+++++++
T Consensus 78 ~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 PSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TTSSHHHHHHHHHHHTESEEEE
T ss_pred cccccccccccccccceeEEEE
Confidence 478899999999999999996
No 155
>PLN02565 cysteine synthase
Probab=64.57 E-value=56 Score=29.90 Aligned_cols=66 Identities=18% Similarity=0.037 Sum_probs=49.9
Q ss_pred HHHHcCC-CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 40 SFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 40 ~L~~~gi-~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
.+.+.|. .+|....+....+=.-+.+.++|...|..+..+=|...+......++.++++++++++.
T Consensus 56 ~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 56 DAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 3445564 77855445555566667777888889999888777777778889999999999999763
No 156
>PLN02736 long-chain acyl-CoA synthetase
Probab=64.42 E-value=1.4e+02 Score=30.38 Aligned_cols=101 Identities=12% Similarity=-0.011 Sum_probs=69.7
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-CCCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..++...... -.+++++...++-..-+ ....++++..|+.++.. +.+.++.+...+++.++++++
T Consensus 78 ~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 78 WMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 468888888777766555432 23347887777765543 33567888889888866 457899999999999999999
Q ss_pred echHHHHHHHhccccccCCCCCeeEEEec
Q 014435 259 VVPPIILALAKNSLVRKFDISSLKLVGSG 287 (424)
Q Consensus 259 ~~p~~~~~l~~~~~~~~~~~~~lr~~~~~ 287 (424)
..+..+..+..... .++.++.++..
T Consensus 156 ~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 98877666544321 23456665543
No 157
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=63.90 E-value=82 Score=27.69 Aligned_cols=79 Identities=10% Similarity=0.142 Sum_probs=53.6
Q ss_pred cHHHHHH-HHHHHHHHHHHcC-CCCCCEEEEECCCCccHHHHHHHHHHh------C--CeEecCCCC---CCHHHHHHHH
Q 014435 26 SFSMFKS-IVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAI------G--AIASTANPV---YTVSELSKQV 92 (424)
Q Consensus 26 Ty~el~~-~~~~~a~~L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~---~~~~~i~~~l 92 (424)
++..+.+ ..+++.+.+.+.+ +.+|++|++...-+.|.++++..+... + ..++.++.. +..+.+..++
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 4444444 3455566677765 578999999999999999888777543 2 355556653 3445567788
Q ss_pred HhcCCeEEEEcc
Q 014435 93 KDSNPKLVITVP 104 (424)
Q Consensus 93 ~~~~~~~ii~~~ 104 (424)
+..+..+.+.+.
T Consensus 84 ~~lgI~~~v~~~ 95 (258)
T PRK10696 84 ESLGVPYHIEEQ 95 (258)
T ss_pred HHhCCCEEEEEe
Confidence 888888777653
No 158
>PRK07638 acyl-CoA synthetase; Validated
Probab=63.90 E-value=48 Score=32.19 Aligned_cols=85 Identities=12% Similarity=0.155 Sum_probs=61.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|+..+.. +..++.++...+++.+++++...
T Consensus 163 ~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 238 (487)
T PRK07638 163 RAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMYTV 238 (487)
T ss_pred EecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEEeC
Confidence 67777765554433 34478889988876665433 345666777889998866 45788899999999999999999
Q ss_pred ccchHHHhcC
Q 014435 104 PELWDKVKDL 113 (424)
Q Consensus 104 ~~~~~~~~~~ 113 (424)
+..+..+...
T Consensus 239 P~~~~~l~~~ 248 (487)
T PRK07638 239 PTMLESLYKE 248 (487)
T ss_pred cHHHHHHHhC
Confidence 8877666543
No 159
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=63.59 E-value=38 Score=32.76 Aligned_cols=83 Identities=11% Similarity=0.153 Sum_probs=60.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|++.+...+.... ...++.++|++....|-... .+..+++.+..|+.++..+ ..++.++...+++.++.++...
T Consensus 161 ~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~ 236 (483)
T PRK03640 161 QTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISVV 236 (483)
T ss_pred EecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEeH
Confidence 68887765443322 33588999999888875322 2334567777899988765 5688999999999999999998
Q ss_pred ccchHHHh
Q 014435 104 PELWDKVK 111 (424)
Q Consensus 104 ~~~~~~~~ 111 (424)
+.....+.
T Consensus 237 P~~~~~l~ 244 (483)
T PRK03640 237 STMLQRLL 244 (483)
T ss_pred HHHHHHHH
Confidence 88776654
No 160
>PRK08316 acyl-CoA synthetase; Validated
Probab=63.56 E-value=47 Score=32.51 Aligned_cols=84 Identities=8% Similarity=0.084 Sum_probs=61.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+|++.+... ++......++++++++....|-.. .+...+++++..|+..++.+. ..++.+...+++.++++++
T Consensus 190 ~~s~~~l~~~---~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 265 (523)
T PRK08316 190 MLTHRALIAE---YVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDA-PDPELILRTIEAERITSFF 265 (523)
T ss_pred EEecHHHHHH---HHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecC-CCHHHHHHHHHHhCCeEEE
Confidence 3688887554 334445567899999888777532 233445677888999988754 4788899999999999999
Q ss_pred EcccchHHHh
Q 014435 102 TVPELWDKVK 111 (424)
Q Consensus 102 ~~~~~~~~~~ 111 (424)
+.+..+..+.
T Consensus 266 ~~P~~~~~l~ 275 (523)
T PRK08316 266 APPTVWISLL 275 (523)
T ss_pred eCHHHHHHHH
Confidence 9887765544
No 161
>PRK05850 acyl-CoA synthetase; Validated
Probab=63.08 E-value=91 Score=31.08 Aligned_cols=86 Identities=14% Similarity=0.107 Sum_probs=63.7
Q ss_pred hhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CCHHHHHHHHHHccce
Q 014435 180 VILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVT 255 (424)
Q Consensus 180 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t 255 (424)
..+|+..+...+..++........+.+++...++.+. .+...+++++..|+.++..+. .....+...+++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGL--EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 3578888877777766655543445588888887654 344568889999999988753 3568899999999999
Q ss_pred EEEechHHHHHH
Q 014435 256 VWWVVPPIILAL 267 (424)
Q Consensus 256 ~~~~~p~~~~~l 267 (424)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999988766554
No 162
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=62.86 E-value=47 Score=29.49 Aligned_cols=83 Identities=13% Similarity=0.125 Sum_probs=51.0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe-EecCCCCCCHHHHHHHH
Q 014435 17 PPLVLPSDPSFSMFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI-ASTANPVYTVSELSKQV 92 (424)
Q Consensus 17 ~~~~~~~~~Ty~el~~~~~~~a---~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~i~~~l 92 (424)
.....|+.+++.+........+ +.+.+.+..+|++|+++..-..-.+++++|- ..|+. ++.++. +++. ..++
T Consensus 86 ~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak-~~G~~~Vi~~~~--~~~r-~~~a 161 (280)
T TIGR03366 86 AIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAA-AAGAARVVAADP--SPDR-RELA 161 (280)
T ss_pred cEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHH-HHHH
Confidence 3556778888876554333222 2345556779999999977556666666654 45875 544432 3333 4566
Q ss_pred HhcCCeEEEEc
Q 014435 93 KDSNPKLVITV 103 (424)
Q Consensus 93 ~~~~~~~ii~~ 103 (424)
++.+++.++..
T Consensus 162 ~~~Ga~~~i~~ 172 (280)
T TIGR03366 162 LSFGATALAEP 172 (280)
T ss_pred HHcCCcEecCc
Confidence 77888776643
No 163
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=62.19 E-value=22 Score=27.74 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCC---CccHHHHHHHHHHhCCeE
Q 014435 35 IKVSHSFRHLGITKKDVVLIFAPN---SIHFPICFLGVIAIGAIA 76 (424)
Q Consensus 35 ~~~a~~L~~~gi~~g~~V~l~~~~---~~~~~~~~lA~~~~G~~~ 76 (424)
..++..|.+.||.+++.|.+++.. +.....+++++-.+|..-
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~ 125 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPD 125 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCC
Confidence 478888999999999999999875 566677778888888653
No 164
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=61.79 E-value=27 Score=32.49 Aligned_cols=63 Identities=21% Similarity=0.302 Sum_probs=44.3
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHHHhcCCeEEEEc
Q 014435 37 VSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-----VYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 37 ~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+-..|...|+++||.|++- .+-+....-|+..+|+.++.+|- ..+++.+...+..-. ++|+..
T Consensus 53 l~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 53 LHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 3445667899999988875 55677888999999999998875 356788888876444 666664
No 165
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=61.74 E-value=37 Score=31.87 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=35.3
Q ss_pred HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 014435 42 RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 42 ~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~i~~~l~~~~~~~ii~~ 103 (424)
...++++||.|.+-. +.+.....++...|+.++.++.+ .+.+.+...++. +.++|+..
T Consensus 64 ~al~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 64 LLLDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHcCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 344678888777643 34455556667778887776543 345666666543 55666543
No 166
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=61.70 E-value=57 Score=32.45 Aligned_cols=84 Identities=21% Similarity=0.210 Sum_probs=60.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc-cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|.+.+...+.... ...++.++|++....|-.. .-+...++.+..|+..+.. +...+..+...+++.++.++...
T Consensus 192 ~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~~ 267 (563)
T PLN02860 192 ISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMITV 267 (563)
T ss_pred eehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEEeC
Confidence 57777765444332 3457889998887777532 2234567788889888766 45788899999999999999998
Q ss_pred ccchHHHhc
Q 014435 104 PELWDKVKD 112 (424)
Q Consensus 104 ~~~~~~~~~ 112 (424)
+..+..+..
T Consensus 268 P~~~~~l~~ 276 (563)
T PLN02860 268 PAMMADLIS 276 (563)
T ss_pred hHHHHHHHH
Confidence 877665543
No 167
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=60.72 E-value=42 Score=30.39 Aligned_cols=68 Identities=10% Similarity=0.074 Sum_probs=53.5
Q ss_pred HHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccchHHH
Q 014435 40 SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKV 110 (424)
Q Consensus 40 ~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~ 110 (424)
-|.+.|+++|.+|+|..--+.-.+...+|.+. |..+.-++... ..-+..+++++++..|...+.....
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~ 240 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIM 240 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHH
Confidence 46788999999999999999999999999874 77777787643 3445788999999988866444333
No 168
>PRK05852 acyl-CoA synthetase; Validated
Probab=60.33 E-value=84 Score=30.94 Aligned_cols=85 Identities=12% Similarity=0.185 Sum_probs=61.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecC-CCCCCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTA-NPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l-~~~~~~~~i~~~l~~~~~~~ii 101 (424)
+|+..+...+..+...+ +++++|++....|-. ..++..+++++..|...+.- ....++..+...+++.++..++
T Consensus 196 ~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 272 (534)
T PRK05852 196 WTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYT 272 (534)
T ss_pred ecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEE
Confidence 58888876666555433 678899887777654 34556678888888776542 3356778888999999999999
Q ss_pred EcccchHHHhc
Q 014435 102 TVPELWDKVKD 112 (424)
Q Consensus 102 ~~~~~~~~~~~ 112 (424)
..+..+..+..
T Consensus 273 ~~P~~~~~l~~ 283 (534)
T PRK05852 273 AVPTIHQILLE 283 (534)
T ss_pred cChHHHHHHHh
Confidence 98877666543
No 169
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=60.18 E-value=55 Score=33.86 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=58.6
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--CccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+|++.+...+..+.. ..++.++|++...+|- ...+...+++.+..|+..+..+.......+...+++.++.++.
T Consensus 384 ~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~ 460 (718)
T PRK08043 384 VHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLF 460 (718)
T ss_pred EEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEE
Confidence 3688888766655443 3478899988888775 3445556788889999988766444556677888899999888
Q ss_pred EcccchH
Q 014435 102 TVPELWD 108 (424)
Q Consensus 102 ~~~~~~~ 108 (424)
..+....
T Consensus 461 ~~p~~~~ 467 (718)
T PRK08043 461 GTSTFLG 467 (718)
T ss_pred chHHHHH
Confidence 7665443
No 170
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=59.69 E-value=46 Score=31.19 Aligned_cols=57 Identities=14% Similarity=0.131 Sum_probs=34.5
Q ss_pred HcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 014435 43 HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 43 ~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~i~~~l~~~~~~~ii~~ 103 (424)
..++++||.|.+-.+. +.....++...|+.++.++.+ .+.+++...++. ++++|+..
T Consensus 65 ~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 65 LLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 3467788877664433 344455666778877766532 456677766654 56666543
No 171
>PRK08308 acyl-CoA synthetase; Validated
Probab=59.69 E-value=70 Score=30.24 Aligned_cols=85 Identities=8% Similarity=0.134 Sum_probs=62.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+|++.+...+..+... .++..+|++....|-. ..++..++..+..|+..+..+. .++..+...+++.++.+++
T Consensus 120 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 195 (414)
T PRK08308 120 RRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN-KNPKFALNILRNTPQHILY 195 (414)
T ss_pred EEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC-CCHHHHHHHHHHhCCeEEE
Confidence 37888887666555443 4567888887777654 3345567888899998887754 5678888899999999999
Q ss_pred EcccchHHHhc
Q 014435 102 TVPELWDKVKD 112 (424)
Q Consensus 102 ~~~~~~~~~~~ 112 (424)
..+..+..+..
T Consensus 196 ~~P~~~~~l~~ 206 (414)
T PRK08308 196 AVPLMLHILGR 206 (414)
T ss_pred cCHHHHHHHHh
Confidence 88876665543
No 172
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=58.45 E-value=77 Score=31.35 Aligned_cols=83 Identities=12% Similarity=0.274 Sum_probs=60.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|+..+...+... ....++++++++....|-+. .++..+++.+..|+.++..+ ....+.+...+++.++..++.
T Consensus 217 ~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~~ 292 (547)
T PRK13295 217 HTANTLMANIVPY---AERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD-IWDPARAAELIRTEGVTFTMA 292 (547)
T ss_pred eccHHHHHHHHHH---HHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC-CCCHHHHHHHHHHcCCcEEEe
Confidence 5887776555543 34457888998888877652 24556778889999988654 567889999999999999888
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 293 ~p~~~~~l~ 301 (547)
T PRK13295 293 STPFLTDLT 301 (547)
T ss_pred cHHHHHHHH
Confidence 776655544
No 173
>PRK09274 peptide synthase; Provisional
Probab=57.80 E-value=1.3e+02 Score=29.80 Aligned_cols=99 Identities=10% Similarity=0.031 Sum_probs=65.1
Q ss_pred CCCEEEEecCCCCC-CCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 161 QTDAAALLYSSGTT-GVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 161 ~~~~~~i~~TSGtT-G~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
++.++++....+++ ...+...+|.+.+...+..+....... -...+++...++-... +...+++++..|+..+..+
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~--~~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE--FFALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH--HHHHHHHHHHcCeEEEEcC
Confidence 45556554332221 122333678888888777766655432 2234788877776543 3346788899999988775
Q ss_pred C-CCHHHHHHHHHHccceEEEech
Q 014435 239 K-FDIEMALRAIEKYRVTVWWVVP 261 (424)
Q Consensus 239 ~-~~~~~~~~~i~~~~~t~~~~~p 261 (424)
+ .....+...+++.++..++..+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 4 6788899999999999888754
No 174
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=57.14 E-value=1.5e+02 Score=30.89 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=76.5
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhh----ccCCC-----------cEEEEecchHHHHHHHHHHH
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL----VGELD-----------HVVLCVLPMFHVFGLSVILY 225 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~----~~~~~-----------~~~~~~~p~~~~~g~~~~~~ 225 (424)
++.++++....| .+ ...+|.+.+...+..+...... .-.+. +++...++-.. .+....+
T Consensus 75 p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~--ew~~~~l 148 (746)
T PTZ00342 75 NNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI--NWLVADL 148 (746)
T ss_pred CCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH--HHHHHHH
Confidence 456666533222 11 1357888888777776665542 12222 67777776544 3334667
Q ss_pred HHhhcCceEEec-CCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecC
Q 014435 226 DQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGA 288 (424)
Q Consensus 226 ~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g 288 (424)
+++..|++.+.. +.+.++.+...+++.++.++++.+..+..+.+... .++.++.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEEEC
Confidence 788888887766 56899999999999999999988777777654322 245677765543
No 175
>PRK11761 cysM cysteine synthase B; Provisional
Probab=56.42 E-value=79 Score=28.49 Aligned_cols=65 Identities=12% Similarity=0.030 Sum_probs=47.8
Q ss_pred HHHHHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 39 HSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 39 ~~L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
..+.+.| +++|++|.. ...+=.-..+.++|.+.|..+..+=|...+......++..++++++++.
T Consensus 52 ~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 52 VQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 3344555 467776554 4445566777778888998888777766667778899999999999985
No 176
>PRK07788 acyl-CoA synthetase; Validated
Probab=56.20 E-value=61 Score=32.07 Aligned_cols=84 Identities=10% Similarity=0.084 Sum_probs=59.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|...+..... ......++.+++++....|-...+ +..++.++..|+.++.. ....++.+...+++.+++.+...
T Consensus 227 ~s~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~~ 302 (549)
T PRK07788 227 RPEPSPLAPLA---GLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALVVV 302 (549)
T ss_pred ccCccHHHHHH---HHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEEEH
Confidence 56666654433 334455788899887776653322 23356677889988766 56688899999999999999998
Q ss_pred ccchHHHhc
Q 014435 104 PELWDKVKD 112 (424)
Q Consensus 104 ~~~~~~~~~ 112 (424)
+..+..+..
T Consensus 303 P~~~~~l~~ 311 (549)
T PRK07788 303 PVMLSRILD 311 (549)
T ss_pred HHHHHHHHh
Confidence 887766543
No 177
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=55.73 E-value=99 Score=27.84 Aligned_cols=64 Identities=16% Similarity=0.032 Sum_probs=46.6
Q ss_pred HHHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 41 FRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 41 L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
..+.| +.+|++| +....+=.-..+.+++.+.|..+..+=|...++.....++..++++++++..
T Consensus 48 a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 48 AEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 34456 4777766 4454555666777788889998887777665566688899999999999764
No 178
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=55.47 E-value=64 Score=31.50 Aligned_cols=84 Identities=18% Similarity=0.157 Sum_probs=60.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc--HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|++.+...+.... ....+++++|++....|-... +...+++.+..|+..+..+...+...+...+++.++.++..
T Consensus 181 ~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 258 (508)
T TIGR02262 181 HTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYG 258 (508)
T ss_pred EechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEec
Confidence 57777765543321 234488999988777765433 33456677888998888777778889999999999999999
Q ss_pred cccchHHH
Q 014435 103 VPELWDKV 110 (424)
Q Consensus 103 ~~~~~~~~ 110 (424)
.+..+..+
T Consensus 259 ~P~~~~~~ 266 (508)
T TIGR02262 259 VPTLYAAM 266 (508)
T ss_pred chHHHHHH
Confidence 88765543
No 179
>PLN03052 acetate--CoA ligase; Provisional
Probab=55.22 E-value=1.5e+02 Score=30.78 Aligned_cols=100 Identities=12% Similarity=0.111 Sum_probs=68.9
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
.++.++++....+..+.+ ...+|.+.+...+..++...... -.+.+++...+|..--+ ...+++++..|+..+...
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeC
Confidence 356777665433221221 23478888888877776655432 23448998888875433 346788888898888774
Q ss_pred -CCCHHHHHHHHHHccceEEEechH
Q 014435 239 -KFDIEMALRAIEKYRVTVWWVVPP 262 (424)
Q Consensus 239 -~~~~~~~~~~i~~~~~t~~~~~p~ 262 (424)
.+.++.+...+++.++.+++....
T Consensus 265 p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 265 DSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCc
Confidence 588999999999999999988664
No 180
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=55.06 E-value=1.3e+02 Score=25.27 Aligned_cols=91 Identities=13% Similarity=0.193 Sum_probs=55.3
Q ss_pred cEEEEecch--HHHHHHHHHHHHHhhcCceEEec-CCCCHHHHHHHHHHccceEEEechHH------HHHHHhccccccC
Q 014435 206 HVVLCVLPM--FHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPI------ILALAKNSLVRKF 276 (424)
Q Consensus 206 ~~~~~~~p~--~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~------~~~l~~~~~~~~~ 276 (424)
.+++..++. .|..|.......--..|-.++.. ....++++.+.+++.+++++...-++ +..+++.......
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~ 164 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY 164 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC
Confidence 344444444 78888754444444677777755 45788999999999999988766432 2233332222210
Q ss_pred CCCCeeEEEecCCCCCHHHHHH
Q 014435 277 DISSLKLVGSGAAPLGKELMED 298 (424)
Q Consensus 277 ~~~~lr~~~~~g~~~~~~~~~~ 298 (424)
.+.+ .+++||.+++++..+.
T Consensus 165 -~~~v-~i~vGG~~~~~~~~~~ 184 (197)
T TIGR02370 165 -RDSV-KFMVGGAPVTQDWADK 184 (197)
T ss_pred -CCCC-EEEEEChhcCHHHHHH
Confidence 1223 3788998888765443
No 181
>PRK06164 acyl-CoA synthetase; Validated
Probab=54.01 E-value=71 Score=31.47 Aligned_cols=84 Identities=15% Similarity=0.224 Sum_probs=62.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC-ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS-IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|.+.+...+..++..+ ++.+++++...+|-+ .--+..+++.+..|+.++.. +......+...+++.++.+++..
T Consensus 201 ~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~ 276 (540)
T PRK06164 201 HRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PVFDAARTARALRRHRVTHTFGN 276 (540)
T ss_pred EehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeeecCC
Confidence 57777776665555444 678899888887764 22234577888889888766 45678889999999999999998
Q ss_pred ccchHHHhc
Q 014435 104 PELWDKVKD 112 (424)
Q Consensus 104 ~~~~~~~~~ 112 (424)
+..+..+..
T Consensus 277 p~~l~~l~~ 285 (540)
T PRK06164 277 DEMLRRILD 285 (540)
T ss_pred HHHHHHHHH
Confidence 877766544
No 182
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=53.25 E-value=62 Score=31.92 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=60.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|++.+...+...... .++.++|++....|-.. .+...+++.+..|+..+..+ ...++.+...+++.++.++..
T Consensus 210 ~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~~~ 285 (546)
T PRK08314 210 HTHRTVMANAVGSVLW---SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHWTN 285 (546)
T ss_pred EecHHHHHHHHHHHHh---hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCceecc
Confidence 6888887665544333 36788898877766432 23456678899999998875 467888999999999999998
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+.....+.
T Consensus 286 ~p~~~~~ll 294 (546)
T PRK08314 286 IPTMVVDFL 294 (546)
T ss_pred cHHHHHHHH
Confidence 877655443
No 183
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=53.20 E-value=91 Score=30.90 Aligned_cols=91 Identities=10% Similarity=0.072 Sum_probs=70.8
Q ss_pred hhhhcHHHHHHHHHHHHhhhhhc---cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccc
Q 014435 179 GVILTHKNFIAASLMISAHQELV---GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRV 254 (424)
Q Consensus 179 ~v~~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~ 254 (424)
+..+|+..+...+...+..+... -.+.|++....|....+-. ..++++..|+.+.... .++...+...++.-++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~--~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ 120 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE--LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKP 120 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCccccccCcccCHHHHHHHHHhcCC
Confidence 56788888888887777666532 2345999999998776544 5678888888888764 4799999999999999
Q ss_pred eEEEechHHHHHHHhcc
Q 014435 255 TVWWVVPPIILALAKNS 271 (424)
Q Consensus 255 t~~~~~p~~~~~l~~~~ 271 (424)
++++.....+..+.+..
T Consensus 121 kiif~d~~~~~~i~~~~ 137 (537)
T KOG1176|consen 121 KLIFVDEDFYDKISEAT 137 (537)
T ss_pred eEEEEcCchHHHHHHHH
Confidence 99999888887775543
No 184
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=52.74 E-value=39 Score=32.74 Aligned_cols=59 Identities=19% Similarity=0.219 Sum_probs=38.5
Q ss_pred CCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC-CCCHHHHHHHHHhcCCeEEEEcccch
Q 014435 48 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-VYTVSELSKQVKDSNPKLVITVPELW 107 (424)
Q Consensus 48 ~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~i~~~l~~~~~~~ii~~~~~~ 107 (424)
+||+|++=.| ++.-+...+-..-+..+.+|++. .+.++.++..++.-+++++++.+.+.
T Consensus 178 pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 178 PGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred CCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC
Confidence 6676655444 44444444444444444445543 57789999999999999999987543
No 185
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=51.96 E-value=61 Score=29.78 Aligned_cols=94 Identities=11% Similarity=0.087 Sum_probs=62.7
Q ss_pred CCCCceeecCCCCCCCCCCCcHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC
Q 014435 6 YGRDGIYRSLRPPLVLPSDPSFSMFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV 82 (424)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a---~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 82 (424)
|++.+..+ ..-.+..|+.+.+.+..-....-. +.|+..++++|++|+|..--+.-.+..++|-.. |+.++.++-.
T Consensus 122 yaeyv~v~-~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~ 199 (339)
T COG1064 122 YAEYVVVP-ARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRS 199 (339)
T ss_pred ceeEEEEc-hHHeEECCCCCChhhhhhhhcCeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCC
Confidence 44443333 333455666666554443332222 346677999999999998889999999998764 5888877653
Q ss_pred CCHHHHHHHHHhcCCeEEEEcc
Q 014435 83 YTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 83 ~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
++-....++++++.++...
T Consensus 200 ---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 200 ---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred ---hHHHHHHHHhCCcEEEEcC
Confidence 3445567789999999864
No 186
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=51.37 E-value=1.1e+02 Score=27.22 Aligned_cols=67 Identities=10% Similarity=0.006 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCC----CHHHHHHHHHhcCCeEEEEcc
Q 014435 32 SIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY----TVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 32 ~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~i~~~l~~~~~~~ii~~~ 104 (424)
.|...+|..|++.| ..|..++.+....... .+...|..+..++... ..+++..++++.+++++|+|.
T Consensus 18 ~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~ 88 (279)
T TIGR03590 18 MRCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDH 88 (279)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcC
Confidence 46788999997754 4566666665554333 3357788877775432 345688999999999999996
No 187
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=50.87 E-value=1.2e+02 Score=23.70 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEEechH------HHHHHHhccccccCCCCCeeEEEec
Q 014435 215 FHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWWVVPP------IILALAKNSLVRKFDISSLKLVGSG 287 (424)
Q Consensus 215 ~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~------~~~~l~~~~~~~~~~~~~lr~~~~~ 287 (424)
.|..|........-..|..++.... ..++++.+.+.+++++++..+-. .+..+.+..... .++.+ .+++|
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~--~~~~~-~i~vG 91 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA--GLGDI-LLYVG 91 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc--CCCCC-eEEEE
Confidence 6777775444444467877777754 67899999999999998877642 223333333222 23444 46667
Q ss_pred CCCC-C----HHHHHHHHHh
Q 014435 288 AAPL-G----KELMEDCQKN 302 (424)
Q Consensus 288 g~~~-~----~~~~~~~~~~ 302 (424)
|... + ++..+++++.
T Consensus 92 G~~~~~~~~~~~~~~~l~~~ 111 (137)
T PRK02261 92 GNLVVGKHDFEEVEKKFKEM 111 (137)
T ss_pred CCCCCCccChHHHHHHHHHc
Confidence 7653 2 3444555554
No 188
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=50.80 E-value=32 Score=30.70 Aligned_cols=52 Identities=6% Similarity=0.130 Sum_probs=42.6
Q ss_pred CCcHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe
Q 014435 24 DPSFSMFKS-----IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 75 (424)
Q Consensus 24 ~~Ty~el~~-----~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~ 75 (424)
.+.|.++.. ....+...|.+.|+.+++.|.++|.++.....+++++-.+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 467777763 2466777788889999999999999999999999999888875
No 189
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=50.18 E-value=1e+02 Score=34.47 Aligned_cols=83 Identities=18% Similarity=0.177 Sum_probs=61.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHH-HHHHHHHhCCeEecCCC--CCCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI-CFLGVIAIGAIASTANP--VYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~-~~lA~~~~G~~~v~l~~--~~~~~~i~~~l~~~~~~~ii 101 (424)
+|.+.+....... ....+++++|++....+-+.+.-+ -+++.+..|+..+..++ ...++.+...+++.+++++.
T Consensus 618 ~~h~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~ 694 (1296)
T PRK10252 618 VGQTAIVNRLLWM---QNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTH 694 (1296)
T ss_pred eccHHHHHHHHHH---HHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEE
Confidence 6777765544332 234588999999998888766543 46778889999988765 35678899999999999998
Q ss_pred EcccchHHH
Q 014435 102 TVPELWDKV 110 (424)
Q Consensus 102 ~~~~~~~~~ 110 (424)
..+..+..+
T Consensus 695 ~~Ps~l~~l 703 (1296)
T PRK10252 695 FVPSMLAAF 703 (1296)
T ss_pred eCHHHHHHH
Confidence 887665543
No 190
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=50.03 E-value=2.1e+02 Score=29.53 Aligned_cols=102 Identities=12% Similarity=0.015 Sum_probs=69.9
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-CCCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..+....... -.+.+++...++-..- +....++++..|+..+.. +.+.++.+...+++.++++++
T Consensus 106 ~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 106 WITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 468888887777765554332 2344787777765443 334567788888888855 557899999999999999999
Q ss_pred echHHHHHHHhccccccCCCCCeeEEEecC
Q 014435 259 VVPPIILALAKNSLVRKFDISSLKLVGSGA 288 (424)
Q Consensus 259 ~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g 288 (424)
+....+..+.+... .+++++.++.-+
T Consensus 184 ~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 184 CDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred ECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 98877776654322 234566665544
No 191
>PRK07470 acyl-CoA synthetase; Validated
Probab=49.18 E-value=1e+02 Score=30.23 Aligned_cols=87 Identities=20% Similarity=0.196 Sum_probs=57.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCC-CCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN-PVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~-~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|.+.+...+......+. .++.++|++..+.|-+..+-...+..+..|+..+.++ ...+++.+...+++.++.++...
T Consensus 183 ~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 261 (528)
T PRK07470 183 LTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLFTV 261 (528)
T ss_pred EehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEech
Confidence 677777543332211111 2567888888888866544443344455666665444 35688899999999999999998
Q ss_pred ccchHHHhc
Q 014435 104 PELWDKVKD 112 (424)
Q Consensus 104 ~~~~~~~~~ 112 (424)
+..+..+..
T Consensus 262 P~~~~~l~~ 270 (528)
T PRK07470 262 PTILKMLVE 270 (528)
T ss_pred HHHHHHHHh
Confidence 887766543
No 192
>PLN03013 cysteine synthase
Probab=48.86 E-value=1.2e+02 Score=29.02 Aligned_cols=65 Identities=18% Similarity=0.052 Sum_probs=48.8
Q ss_pred HHHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 41 FRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 41 L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
+.+.| +++|....+....+=.-+.+.++|...|..+..+=|...+.+....++.++++++++++.
T Consensus 165 a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 33455 578855555556666677777788889988887777667778889999999999999754
No 193
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=48.70 E-value=1e+02 Score=28.86 Aligned_cols=62 Identities=19% Similarity=0.164 Sum_probs=38.9
Q ss_pred HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHHHh---cCCeEEEEc
Q 014435 39 HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-----VYTVSELSKQVKD---SNPKLVITV 103 (424)
Q Consensus 39 ~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~i~~~l~~---~~~~~ii~~ 103 (424)
..+...++++||.|.+-.+. +.....++...|+.++.++. ..+.+++...+++ -++++|+..
T Consensus 59 ~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 59 IACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 34445577889987666543 34445666778888776543 2466778777763 356666643
No 194
>PRK07529 AMP-binding domain protein; Validated
Probab=48.67 E-value=1.7e+02 Score=29.73 Aligned_cols=98 Identities=11% Similarity=0.020 Sum_probs=64.0
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK 239 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 239 (424)
++.++++....+.. ..+...+|.+.+...+..+....... -.+++++...+|-...+ ...+++++..|..+.+.+.
T Consensus 39 p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~~pi~~~ 115 (632)
T PRK07529 39 PDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGIANPINPL 115 (632)
T ss_pred CCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEEEeCCCc
Confidence 46667665432211 11234678888887777766555432 23448888888765543 3456777777854434456
Q ss_pred CCHHHHHHHHHHccceEEEech
Q 014435 240 FDIEMALRAIEKYRVTVWWVVP 261 (424)
Q Consensus 240 ~~~~~~~~~i~~~~~t~~~~~p 261 (424)
+.++.+...+++.++.+++...
T Consensus 116 ~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 116 LEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred CCHHHHHHHHHhcCCcEEEEeC
Confidence 7899999999999999998853
No 195
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=48.65 E-value=1e+02 Score=33.77 Aligned_cols=84 Identities=13% Similarity=0.113 Sum_probs=62.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+..... ..++.++|++...+|-. ..+....++.+..|+..+..+...+.+.+...+++.+++++..
T Consensus 802 ~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~ 878 (1146)
T PRK08633 802 LSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLG 878 (1146)
T ss_pred echHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEe
Confidence 688888766655443 34678889887776642 3334446777888998887776678889999999999999999
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+.....+.
T Consensus 879 ~P~~~~~l~ 887 (1146)
T PRK08633 879 TPTFLRLYL 887 (1146)
T ss_pred cHHHHHHHH
Confidence 887766544
No 196
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=48.16 E-value=30 Score=28.79 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=27.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIF 55 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~ 55 (424)
+||.++++.+.++|..+.+-|.+|.-.|++.
T Consensus 7 vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 7 VSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 7999999999999999999999998666664
No 197
>PRK07787 acyl-CoA synthetase; Validated
Probab=47.94 E-value=1.3e+02 Score=29.05 Aligned_cols=82 Identities=17% Similarity=0.206 Sum_probs=59.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--CccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|++.+...+..+... .++.+++++....|- ...++..+++.+..|+.++..+ ...++.+...++ .++..+..
T Consensus 148 ~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~~~ 222 (471)
T PRK07787 148 LSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLYFG 222 (471)
T ss_pred EeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEEEc
Confidence 6888887766555443 467888877666553 2345666888999999998765 457888899999 89999888
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 223 ~P~~~~~l~ 231 (471)
T PRK07787 223 VPTVWSRIA 231 (471)
T ss_pred chHHHHHHH
Confidence 877665544
No 198
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=47.31 E-value=87 Score=29.38 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=34.5
Q ss_pred HHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHHhcCCeEEE
Q 014435 40 SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 40 ~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~i~~~l~~~~~~~ii 101 (424)
.|...++++||.|.+-.+ .+.....++...|+.++.++.+ .+.+.+...++. +.++|+
T Consensus 64 al~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 64 TLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 344556788887765443 3444445666778887766532 356677766643 456665
No 199
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=47.18 E-value=1.2e+02 Score=30.54 Aligned_cols=83 Identities=17% Similarity=0.141 Sum_probs=59.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc--HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+..+... .++.++|++....|-... ++..+++.+..|+..+. .+......+...+++.++.++..
T Consensus 219 ~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~~~ 294 (600)
T PRK08279 219 MSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAFQY 294 (600)
T ss_pred EeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEEee
Confidence 6888887766665544 578899999888876543 33455666777777765 45677888888999999999988
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+.....+.
T Consensus 295 ~p~l~~~l~ 303 (600)
T PRK08279 295 IGELCRYLL 303 (600)
T ss_pred hHHHHHHHH
Confidence 776655443
No 200
>PLN00011 cysteine synthase
Probab=47.07 E-value=1.6e+02 Score=27.01 Aligned_cols=64 Identities=14% Similarity=-0.081 Sum_probs=47.6
Q ss_pred HHHcC-CCCC-CEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 41 FRHLG-ITKK-DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 41 L~~~g-i~~g-~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
..+.| +.+| +.|. ....+=.-..+.++|.+.|..+..+=|...++.....++..++++++++++
T Consensus 59 a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 59 AEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 34444 6777 5554 455566777777888889988887777666677788999999999999864
No 201
>PRK13388 acyl-CoA synthetase; Provisional
Probab=46.77 E-value=2.5e+02 Score=27.79 Aligned_cols=83 Identities=11% Similarity=-0.042 Sum_probs=59.3
Q ss_pred hhcHHHHHHHHHHHHhhhhhcc--CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEE
Q 014435 181 ILTHKNFIAASLMISAHQELVG--ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 257 (424)
.+|...+...+..+........ .+.+++...++-... +...+++++..|+.++..+ .+....+...+++.+++.+
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~--~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~ 103 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE--MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLL 103 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH--HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEE
Confidence 5688888877777665554332 234777777765443 3346788899999988765 4678899999999999999
Q ss_pred EechHHHH
Q 014435 258 WVVPPIIL 265 (424)
Q Consensus 258 ~~~p~~~~ 265 (424)
+.......
T Consensus 104 i~~~~~~~ 111 (540)
T PRK13388 104 VTDAEHRP 111 (540)
T ss_pred EEChhhhH
Confidence 88765543
No 202
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=46.56 E-value=1.5e+02 Score=29.30 Aligned_cols=98 Identities=11% Similarity=-0.009 Sum_probs=70.1
Q ss_pred EEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhh-ccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-CCCCH
Q 014435 165 AALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL-VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDI 242 (424)
Q Consensus 165 ~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~ 242 (424)
..+.|-+-.++. -.+|.+.+...+..+...... ...+.|++..++|..-.+- ..++++...|+..... +.+.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gvkGDrV~iymp~~pe~~--~a~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGVKGDRVAIYMPNSPEAV--IALLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEeecccCCCH
Confidence 344444333333 456888888877777666642 2225699999999966543 4678888889887766 45899
Q ss_pred HHHHHHHHHccceEEEechHHHHHH
Q 014435 243 EMALRAIEKYRVTVWWVVPPIILAL 267 (424)
Q Consensus 243 ~~~~~~i~~~~~t~~~~~p~~~~~l 267 (424)
+.+...+.+.++.++++....++..
T Consensus 102 ~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 102 EAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred HHHHHHHHccCCCEEEEeccccccc
Confidence 9999999999999999877766543
No 203
>PRK06839 acyl-CoA synthetase; Validated
Probab=46.32 E-value=2.8e+02 Score=26.76 Aligned_cols=86 Identities=12% Similarity=-0.011 Sum_probs=62.7
Q ss_pred hhhcHHHHHHHHHHHHhhhh--hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceE
Q 014435 180 VILTHKNFIAASLMISAHQE--LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTV 256 (424)
Q Consensus 180 v~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 256 (424)
..+|+..+...+..+..... ....+++++...++-... +...+++++..|+..+..+. .++..+...+++.+++.
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 46788888887777766553 223344777777766543 34467888999999887754 68899999999999999
Q ss_pred EEechHHHHHH
Q 014435 257 WWVVPPIILAL 267 (424)
Q Consensus 257 ~~~~p~~~~~l 267 (424)
++..+.....+
T Consensus 104 i~~~~~~~~~~ 114 (496)
T PRK06839 104 LFVEKTFQNMA 114 (496)
T ss_pred EEEcHHHHHHH
Confidence 99887765443
No 204
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.31 E-value=94 Score=30.69 Aligned_cols=85 Identities=15% Similarity=0.096 Sum_probs=58.3
Q ss_pred CcHHHHHHHHHHHHHHH-HHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSF-RHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L-~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|...+.... .+..+ ...++.++|++..+.|-... .....++++..|+.++...+...++.+..++++.++..+..
T Consensus 196 ~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~ 273 (539)
T PRK07008 196 YSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAG 273 (539)
T ss_pred EecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEe
Confidence 5666554222 22222 24578889988877765322 23334677889999887777788899999999999999988
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 274 ~P~~~~~l~ 282 (539)
T PRK07008 274 VPTVWLGLL 282 (539)
T ss_pred chHHHHHHH
Confidence 877665544
No 205
>PRK13383 acyl-CoA synthetase; Provisional
Probab=46.28 E-value=1.6e+02 Score=28.72 Aligned_cols=72 Identities=11% Similarity=0.078 Sum_probs=52.6
Q ss_pred HHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccchHHHhc
Q 014435 40 SFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKD 112 (424)
Q Consensus 40 ~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~ 112 (424)
.+...++.++|++....|-... .....++.+..|+.+++.. ..+.+.+...++..++..+...+..+..+..
T Consensus 208 ~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 280 (516)
T PRK13383 208 ILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHR-HFDAEAALAQASLHRADAFTAVPVVLARILE 280 (516)
T ss_pred HHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECC-CCCHHHHHHHHHHhCCcEEEecHHHHHHHHh
Confidence 3455688999998887764322 2344566677899888664 5678888899999999999998877766543
No 206
>PLN02246 4-coumarate--CoA ligase
Probab=46.27 E-value=2.6e+02 Score=27.53 Aligned_cols=84 Identities=10% Similarity=0.069 Sum_probs=59.0
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|+..+...+..+....... -.+.+++...++-.- .+...+++++..|++.+..++ +....+...+++.++..++
T Consensus 50 ~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 127 (537)
T PLN02246 50 VYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLII 127 (537)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEE
Confidence 578888877776665554322 223477777765543 344567888889999887754 6789999999999999988
Q ss_pred echHHHHH
Q 014435 259 VVPPIILA 266 (424)
Q Consensus 259 ~~p~~~~~ 266 (424)
........
T Consensus 128 ~~~~~~~~ 135 (537)
T PLN02246 128 TQSCYVDK 135 (537)
T ss_pred EccchHHH
Confidence 77655443
No 207
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=46.22 E-value=1.4e+02 Score=29.35 Aligned_cols=83 Identities=14% Similarity=0.092 Sum_probs=59.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHH--H-HHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP--I-CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~--~-~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
+|...+........ ...++.++|++....|....+- . ..++++..|++.+..+ ...+..+...+++.++.++.
T Consensus 203 ~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 278 (527)
T TIGR02275 203 RTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAP-DPSPTDCFPLIERHKVTVTA 278 (527)
T ss_pred eehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECC-CCCHHHHHHHHHHhCCeEEE
Confidence 68887766554433 3457888998888877553332 2 3677788898877654 45677888899999999999
Q ss_pred EcccchHHHh
Q 014435 102 TVPELWDKVK 111 (424)
Q Consensus 102 ~~~~~~~~~~ 111 (424)
..+..+..+.
T Consensus 279 ~~p~~~~~l~ 288 (527)
T TIGR02275 279 LVPPAVALWM 288 (527)
T ss_pred ecHHHHHHHH
Confidence 9887765543
No 208
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=46.18 E-value=1.6e+02 Score=26.57 Aligned_cols=64 Identities=19% Similarity=0.094 Sum_probs=46.5
Q ss_pred HHHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 41 FRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 41 L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
+.+.| +.+|+.| +....+=.-..+.++|.+.|..+..+=|...+......++..+++++++..+
T Consensus 49 a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 49 AEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 34445 4677766 4555566667777788889988877777665566678899999999998754
No 209
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=46.09 E-value=2.2e+02 Score=28.81 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=67.4
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
.++.++++.... .+ .....+|.+.+...+..++...... -.+.+++...+|-.-.+ ...+++++..|+..+...
T Consensus 80 ~p~~~Al~~~~~--~~-~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGD--DP-GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECC--CC-CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecC
Confidence 366777764321 10 1234578998888877776665432 23448888877765433 346788889999988775
Q ss_pred -CCCHHHHHHHHHHccceEEEechH
Q 014435 239 -KFDIEMALRAIEKYRVTVWWVVPP 262 (424)
Q Consensus 239 -~~~~~~~~~~i~~~~~t~~~~~p~ 262 (424)
.+.+..+...+++.++.+++....
T Consensus 155 ~~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 GGFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcCc
Confidence 478899999999999999987653
No 210
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=45.90 E-value=1.5e+02 Score=25.21 Aligned_cols=89 Identities=17% Similarity=0.199 Sum_probs=55.7
Q ss_pred cEEEEecc-hHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEEechHHH------HHHHhccccccCC
Q 014435 206 HVVLCVLP-MFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPII------LALAKNSLVRKFD 277 (424)
Q Consensus 206 ~~~~~~~p-~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~------~~l~~~~~~~~~~ 277 (424)
..++...+ =.|..|.......--..|-.++... ...++++.+.+.+++++++...-.+- ..+++.....+
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~-- 167 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG-- 167 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC--
Confidence 44444444 3677777544444446777777765 47899999999999999887664322 22222222222
Q ss_pred CCCeeEEEecCCCCCHHHHHH
Q 014435 278 ISSLKLVGSGAAPLGKELMED 298 (424)
Q Consensus 278 ~~~lr~~~~~g~~~~~~~~~~ 298 (424)
..++ +++||.+++++..+.
T Consensus 168 -~~~~-i~vGG~~~~~~~~~~ 186 (213)
T cd02069 168 -IKIP-LLIGGAATSRKHTAV 186 (213)
T ss_pred -CCCe-EEEEChhcCHHHHhh
Confidence 1333 678999999887765
No 211
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=45.74 E-value=2.1e+02 Score=28.98 Aligned_cols=98 Identities=10% Similarity=0.040 Sum_probs=67.5
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
.++.++++.... .+|. ...+|.+.+...+..++...... -.+.+++...+|..-.+ ...+++++..|+..+...
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEeccC
Confidence 456677664321 1222 23578888887777766655432 23448888888765433 346788888999888764
Q ss_pred -CCCHHHHHHHHHHccceEEEechH
Q 014435 239 -KFDIEMALRAIEKYRVTVWWVVPP 262 (424)
Q Consensus 239 -~~~~~~~~~~i~~~~~t~~~~~p~ 262 (424)
.+.+..+...+++.+++++++...
T Consensus 145 ~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 578999999999999999988654
No 212
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=45.28 E-value=1.1e+02 Score=29.30 Aligned_cols=17 Identities=0% Similarity=-0.091 Sum_probs=9.9
Q ss_pred CHHHHHHHHHHcc-ceEE
Q 014435 241 DIEMALRAIEKYR-VTVW 257 (424)
Q Consensus 241 ~~~~~~~~i~~~~-~t~~ 257 (424)
+...+.+.++++. +..+
T Consensus 299 Na~~la~~L~~~p~V~~V 316 (432)
T PRK06702 299 NALAVAKWLADHERIEWV 316 (432)
T ss_pred HHHHHHHHHHhCCCcceE
Confidence 4566666777663 4444
No 213
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=45.21 E-value=2.9e+02 Score=28.24 Aligned_cols=87 Identities=13% Similarity=-0.004 Sum_probs=63.1
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..++...... -.+.+++...++-..- +....++++..|+..+... .+..+.+...+++.++++++
T Consensus 77 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 77 WLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 478888888877776655432 2344788777776543 3346778888898888664 47889999999999999999
Q ss_pred echHHHHHHHh
Q 014435 259 VVPPIILALAK 269 (424)
Q Consensus 259 ~~p~~~~~l~~ 269 (424)
.....+..+..
T Consensus 155 ~~~~~~~~~~~ 165 (660)
T PLN02861 155 VQESKISSILS 165 (660)
T ss_pred ECHHHHHHHHH
Confidence 87766555543
No 214
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.16 E-value=1.3e+02 Score=29.93 Aligned_cols=85 Identities=18% Similarity=0.208 Sum_probs=59.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|++.+...+..+. .....++.+++++...+|-...+ ....++++..|...+...+..+++.+...+++.++.++...
T Consensus 201 ~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 279 (576)
T PRK05620 201 YSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGV 279 (576)
T ss_pred EEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeec
Confidence 57777754433221 12235788899888887764332 23457778889888876667788999999999999999987
Q ss_pred ccchHHH
Q 014435 104 PELWDKV 110 (424)
Q Consensus 104 ~~~~~~~ 110 (424)
+.....+
T Consensus 280 P~~~~~l 286 (576)
T PRK05620 280 PTLWIQL 286 (576)
T ss_pred CHHHHHH
Confidence 7655443
No 215
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=45.02 E-value=93 Score=30.66 Aligned_cols=84 Identities=17% Similarity=0.172 Sum_probs=62.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC--CCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAP--NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~--~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|+......+.- .....|+++.|+|-+.+| ++.-.++-+-+|+..|+++| |....++...-.=+.+.++.++-.
T Consensus 262 ith~r~~~~a~g---~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~QY 337 (649)
T KOG1179|consen 262 ITHLRYLQGAAG---FYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQY 337 (649)
T ss_pred HHHHHHHHHHHH---HHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeeeh
Confidence 566555544332 333458999999998877 46777888889999999977 778999999988899999999877
Q ss_pred cccchHHHhc
Q 014435 103 VPELWDKVKD 112 (424)
Q Consensus 103 ~~~~~~~~~~ 112 (424)
--+...-+..
T Consensus 338 IGElcRYLl~ 347 (649)
T KOG1179|consen 338 IGELCRYLLN 347 (649)
T ss_pred HHHHHHHHHc
Confidence 6555544443
No 216
>PLN02654 acetate-CoA ligase
Probab=44.93 E-value=1.3e+02 Score=30.71 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=61.0
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..++..+... -.+.+++...+|..-- ....+++++..|+..+... .+.++.+...+++.++.+++
T Consensus 120 ~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e--~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li 197 (666)
T PLN02654 120 SLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME--LPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVI 197 (666)
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 578888888877776665433 2344888888887553 3346788899999888774 58899999999999999999
Q ss_pred echH
Q 014435 259 VVPP 262 (424)
Q Consensus 259 ~~p~ 262 (424)
+...
T Consensus 198 ~~~~ 201 (666)
T PLN02654 198 TCNA 201 (666)
T ss_pred EcCc
Confidence 7654
No 217
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=44.64 E-value=1.3e+02 Score=30.65 Aligned_cols=80 Identities=10% Similarity=-0.002 Sum_probs=60.6
Q ss_pred hhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-CCCCHHHHHHHHHHccceEE
Q 014435 180 VILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 180 v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 257 (424)
..+|.+.+...+..++...... -.+.|++...+|..--+- ..+++++..|+..+.. +.+.++.+...+++.+++++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~--~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 168 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL--IAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLI 168 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEE
Confidence 3578888888877776655432 234489998888865443 4677888888888766 45899999999999999999
Q ss_pred Eech
Q 014435 258 WVVP 261 (424)
Q Consensus 258 ~~~p 261 (424)
++..
T Consensus 169 i~~~ 172 (647)
T PTZ00237 169 ITTN 172 (647)
T ss_pred EEcc
Confidence 9864
No 218
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=44.47 E-value=1.1e+02 Score=31.08 Aligned_cols=68 Identities=9% Similarity=0.021 Sum_probs=51.2
Q ss_pred cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC---CCCHHHHHHHHHhcCCeEEEEcccchHHHh
Q 014435 44 LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP---VYTVSELSKQVKDSNPKLVITVPELWDKVK 111 (424)
Q Consensus 44 ~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~ 111 (424)
.+++++|++....+.+......+++.+..|++.+..+. ...+..+..++++.++.++.+.+.....+.
T Consensus 300 ~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 370 (655)
T PRK03584 300 CDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACE 370 (655)
T ss_pred cCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHH
Confidence 47889998877666554443456788999999987653 235788899999999999988877666554
No 219
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=44.19 E-value=2e+02 Score=26.03 Aligned_cols=69 Identities=12% Similarity=0.034 Sum_probs=48.5
Q ss_pred HHHHHHHH----HcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 35 IKVSHSFR----HLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 35 ~~~a~~L~----~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+|.|.++. +.| +++|++ .+=.-.+=-=+...+.|...|..++.+=|..-..+...+|+.+++++++++.
T Consensus 43 DR~A~~mI~~Ae~~G~l~pG~t-IVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 43 DRIALYMIEDAEKRGLLKPGGT-IVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHHHHHHHHHHHcCCCCCCCE-EEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 45555543 345 899983 3333334445566666777898888777766667778999999999999997
No 220
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=43.71 E-value=47 Score=24.74 Aligned_cols=41 Identities=20% Similarity=0.339 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe
Q 014435 35 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 75 (424)
Q Consensus 35 ~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~ 75 (424)
..+...+...|+.+++.|.+++..+.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45666777889989999999999888877777778888864
No 221
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=43.55 E-value=1.1e+02 Score=21.11 Aligned_cols=66 Identities=9% Similarity=0.180 Sum_probs=51.1
Q ss_pred CCCcHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeE
Q 014435 23 SDPSFSMFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a---~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 99 (424)
...||.||.+.-..++ +.|....++.+|-|+|+.=++-. ..-++.++...+.+++...++..+++.
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchh
Confidence 3579999887776555 45777789999999998766533 345677888889999999999888865
No 222
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=43.28 E-value=23 Score=23.83 Aligned_cols=19 Identities=32% Similarity=0.373 Sum_probs=15.0
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 014435 37 VSHSFRHLGITKKDVVLIF 55 (424)
Q Consensus 37 ~a~~L~~~gi~~g~~V~l~ 55 (424)
+-..|+++|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 3356788899999998875
No 223
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=42.86 E-value=1.4e+02 Score=29.53 Aligned_cols=83 Identities=16% Similarity=0.113 Sum_probs=60.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHH---HHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP---ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~---~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
+|.+.+...+..... ..++.++|++...+|-...+- ...++++..|+..+... ..........+++.++.++.
T Consensus 202 ~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~ 277 (536)
T PRK10946 202 RTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP-DPSATLCFPLIEKHQVNVTA 277 (536)
T ss_pred EehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC-CCCHHHHHHHHHHhCCcEEE
Confidence 688888776665443 347888998888877654332 24678888999988654 44677788899999999999
Q ss_pred EcccchHHHh
Q 014435 102 TVPELWDKVK 111 (424)
Q Consensus 102 ~~~~~~~~~~ 111 (424)
..+..+..+.
T Consensus 278 ~~p~~~~~l~ 287 (536)
T PRK10946 278 LVPPAVSLWL 287 (536)
T ss_pred eChHHHHHHH
Confidence 8877665543
No 224
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=42.78 E-value=1.7e+02 Score=27.41 Aligned_cols=62 Identities=21% Similarity=0.100 Sum_probs=47.3
Q ss_pred HcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 43 HLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 43 ~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+.| +++|....+....+-.-+.+.++|...|..+..+=|...+.+....++.++++++++++
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 345 67785444445566677777888899998888877776777778999999999999974
No 225
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=42.75 E-value=61 Score=23.50 Aligned_cols=51 Identities=6% Similarity=0.063 Sum_probs=37.8
Q ss_pred CcHHHHHHHH----HHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe
Q 014435 25 PSFSMFKSIV----IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 75 (424)
Q Consensus 25 ~Ty~el~~~~----~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~ 75 (424)
+.+.++.+.. ..+...+...++.+++.|.+++.++.....+...+...|..
T Consensus 38 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 38 IPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred echHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 5666765432 35666677778888889999999988877777888888864
No 226
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=42.42 E-value=1.6e+02 Score=28.92 Aligned_cols=82 Identities=11% Similarity=0.207 Sum_probs=58.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+.... ...+++++|++....|-.. .++...+..+..|...+.. +.+.+..+...+++.++.++..
T Consensus 215 ~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~vt~~~~ 290 (538)
T TIGR03208 215 HTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ-DIWNPARAAELIRETGVTFTMA 290 (538)
T ss_pred eehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec-CccCHHHHHHHHHHhCCeEEec
Confidence 57776665544333 3346788998888887653 3455567777888877654 5678889999999999999988
Q ss_pred cccchHHH
Q 014435 103 VPELWDKV 110 (424)
Q Consensus 103 ~~~~~~~~ 110 (424)
.+.....+
T Consensus 291 ~p~~~~~l 298 (538)
T TIGR03208 291 STPFLTDL 298 (538)
T ss_pred CHHHHHHH
Confidence 77665544
No 227
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=42.22 E-value=2.3e+02 Score=25.59 Aligned_cols=72 Identities=10% Similarity=0.109 Sum_probs=48.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc----------------------------HHHHHHHHHHhCCeE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH----------------------------FPICFLGVIAIGAIA 76 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~----------------------------~~~~~lA~~~~G~~~ 76 (424)
-.+.++.+....+..++++.|+. ..|.|.+-++-. ..+..+|+++.|+.+
T Consensus 126 ~~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~f 203 (295)
T PF07994_consen 126 SKREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPF 203 (295)
T ss_dssp THHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEE
T ss_pred chHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCe
Confidence 34566667778888899998775 456665554433 456778999999999
Q ss_pred ecCCCCCCH--HHHHHHHHhcCCe
Q 014435 77 STANPVYTV--SELSKQVKDSNPK 98 (424)
Q Consensus 77 v~l~~~~~~--~~i~~~l~~~~~~ 98 (424)
+-..|.... ..+..+.++.+.-
T Consensus 204 vN~tP~~~a~~P~l~ela~~~gvp 227 (295)
T PF07994_consen 204 VNGTPSNIADDPALVELAEEKGVP 227 (295)
T ss_dssp EE-SSSTTTTSHHHHHHHHHHTEE
T ss_pred EeccCccccCCHHHHHHHHHcCCC
Confidence 988776654 6777777766553
No 228
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=42.19 E-value=18 Score=24.31 Aligned_cols=19 Identities=32% Similarity=0.461 Sum_probs=12.2
Q ss_pred HHHHHHHHcCCCCCCEEEE
Q 014435 36 KVSHSFRHLGITKKDVVLI 54 (424)
Q Consensus 36 ~~a~~L~~~gi~~g~~V~l 54 (424)
-+-..|+++|+++||.|-|
T Consensus 44 Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 44 GVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp THHHHHHTTT--TT-EEEE
T ss_pred CHHHHHHHcCCCCCCEEEE
Confidence 3445688889999999876
No 229
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=42.11 E-value=81 Score=21.37 Aligned_cols=51 Identities=20% Similarity=0.290 Sum_probs=38.3
Q ss_pred HHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeE
Q 014435 243 EMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATI 308 (424)
Q Consensus 243 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~ 308 (424)
..+++.+.+++++++.- ..+-.++.+.+.+.......+.+.+++.||+..+
T Consensus 19 ~~i~~~l~~~~v~ii~K---------------~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIAK---------------DTNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEEE---------------ecCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 67888999999998762 2233577778887777778888899888886554
No 230
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=41.84 E-value=1.5e+02 Score=30.25 Aligned_cols=95 Identities=16% Similarity=0.086 Sum_probs=66.8
Q ss_pred CCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-C
Q 014435 162 TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-K 239 (424)
Q Consensus 162 ~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~ 239 (424)
++++++.... +|. ...+|.+.+...+..++...... -.+.|++...+|..--+- ..+++++..|+..+... .
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~--~~~lA~~~~Gav~vp~~~~ 172 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAV--VAMLATASVGAIWSSCSPD 172 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHhCeEEEecCCC
Confidence 5566555422 222 23578888888887776666433 234489998888865433 36778888888888774 4
Q ss_pred CCHHHHHHHHHHccceEEEechH
Q 014435 240 FDIEMALRAIEKYRVTVWWVVPP 262 (424)
Q Consensus 240 ~~~~~~~~~i~~~~~t~~~~~p~ 262 (424)
+.++.+...+++.++..+++...
T Consensus 173 ~~~~~l~~~l~~~~~k~li~~~~ 195 (652)
T TIGR01217 173 FGARGVLDRFQQIEPKLLFTVDG 195 (652)
T ss_pred CCHHHHHHHHHhcCCcEEEEccc
Confidence 78999999999999999987653
No 231
>PLN02574 4-coumarate--CoA ligase-like
Probab=41.81 E-value=3.5e+02 Score=26.84 Aligned_cols=85 Identities=18% Similarity=0.139 Sum_probs=60.5
Q ss_pred hhcHHHHHHHHHHHHhhhhh--ccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEE
Q 014435 181 ILTHKNFIAASLMISAHQEL--VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 257 (424)
.+|...+...+..++..... .-.+.+++....+-.. .+...+++++..|+..+..++ .....+...+++.++..+
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~ 143 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV--YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLA 143 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc--hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEE
Confidence 35777777777666655542 2234488888777554 333467888999999887754 678899999999999999
Q ss_pred EechHHHHHH
Q 014435 258 WVVPPIILAL 267 (424)
Q Consensus 258 ~~~p~~~~~l 267 (424)
+..+.....+
T Consensus 144 ~~~~~~~~~~ 153 (560)
T PLN02574 144 FTSPENVEKL 153 (560)
T ss_pred EECHHHHHHH
Confidence 8887765554
No 232
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=41.65 E-value=1.9e+02 Score=28.57 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=66.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecCCC-CCCHHHHHHHHHhcCCeEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANP-VYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~-~~~~~~i~~~l~~~~~~~i 100 (424)
.+|++.+...+..+...+... +++.|++...+|-. .-+...+++.+..|...+...+ .+.++.+...+.+.++..+
T Consensus 190 ~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~ 268 (534)
T COG0318 190 VLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVL 268 (534)
T ss_pred EEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEE
Confidence 379999998877776666532 77888777777653 5556667777889999888876 6888888899988888888
Q ss_pred EEcccchHHHhc
Q 014435 101 ITVPELWDKVKD 112 (424)
Q Consensus 101 i~~~~~~~~~~~ 112 (424)
...+.....+..
T Consensus 269 ~~vPt~~~~ll~ 280 (534)
T COG0318 269 SGVPTFLRELLD 280 (534)
T ss_pred ecchHHHHHHHh
Confidence 777766665443
No 233
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=41.64 E-value=1.2e+02 Score=29.15 Aligned_cols=55 Identities=20% Similarity=0.267 Sum_probs=33.6
Q ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 014435 45 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~i~~~l~~~~~~~ii~~ 103 (424)
++++||.|.+-.+. +.....++...|+.+++++.. .+.+.+...+.. +.++|+..
T Consensus 107 ~~~pGd~VIv~~~t---~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAG---FPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 67888877655433 344556666778877766542 356666666643 55666654
No 234
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=41.38 E-value=42 Score=23.15 Aligned_cols=40 Identities=5% Similarity=0.100 Sum_probs=32.9
Q ss_pred HHHHHH-cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEe
Q 014435 38 SHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 77 (424)
Q Consensus 38 a~~L~~-~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v 77 (424)
..+|.+ .||+.|+-++.+..+..|.+..+=|++++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 356665 4999999999999999999999999999875433
No 235
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=41.30 E-value=94 Score=25.98 Aligned_cols=55 Identities=15% Similarity=0.309 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHH-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 30 FKSIVIKVSHSF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 30 l~~~~~~~a~~L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
..++.+.++.++ ++++++++|.+.+++.. |..++|+ ++....++.++++|.+++=
T Consensus 85 ~lErieg~~~~~l~~~~i~~~DVliviSnS--------------GrNpvpi-------e~A~~~rekGa~vI~vTSl 140 (243)
T COG4821 85 YLERIEGYAKLFLHRLQIRPNDVLIVISNS--------------GRNPVPI-------EVAEYAREKGAKVIAVTSL 140 (243)
T ss_pred hhHhhhhHHHHHHHHhcCCCCCEEEEEeCC--------------CCCCcch-------HHHHHHHhcCCeEEEEehh
Confidence 456777777775 46799999966555543 5556665 4677888999999988753
No 236
>PRK05857 acyl-CoA synthetase; Validated
Probab=41.15 E-value=2.7e+02 Score=27.44 Aligned_cols=81 Identities=14% Similarity=-0.012 Sum_probs=58.2
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..++...... -...+++...++....+ ...+++++..|+..+..+. +..+.+...++..++..++
T Consensus 41 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 41 ALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET--YLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 478888887777766554332 22347777777665533 3467888999999997754 7889999999999998888
Q ss_pred echHH
Q 014435 259 VVPPI 263 (424)
Q Consensus 259 ~~p~~ 263 (424)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 77653
No 237
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=40.95 E-value=53 Score=30.04 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=41.1
Q ss_pred CcHHHHHHH------HHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe
Q 014435 25 PSFSMFKSI------VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 75 (424)
Q Consensus 25 ~Ty~el~~~------~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~ 75 (424)
+.|.++.+. ...+...+.+.|+.+++.|.++|..+.....+++++-.+|..
T Consensus 239 ip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 239 VPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred cCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 667666432 456777788889999999999999999888888998888865
No 238
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=40.89 E-value=1.7e+02 Score=22.77 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 62 FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 62 ~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
..+....+-..|.-++-+-...+++++...+.+.+|++|..+.
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 3445556667899999999999999999999999999999874
No 239
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=40.80 E-value=1.6e+02 Score=26.92 Aligned_cols=84 Identities=6% Similarity=-0.025 Sum_probs=50.9
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHH--HH-HHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKV--SH-SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~--a~-~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
.......++.+++.+........ |. .+...++++|++|.|...-+.-.+++.+| ...|+.++.+.. +++. ..+
T Consensus 129 ~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~VlV~G~g~iG~~a~~~a-~~~G~~vi~~~~--~~~~-~~~ 204 (329)
T TIGR02822 129 AAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGRLGLYGFGGSAHLTAQVA-LAQGATVHVMTR--GAAA-RRL 204 (329)
T ss_pred cccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHH-HHCCCeEEEEeC--ChHH-HHH
Confidence 34445567778887754333221 12 23445789999999998755555544444 446876554443 2333 466
Q ss_pred HHhcCCeEEEE
Q 014435 92 VKDSNPKLVIT 102 (424)
Q Consensus 92 l~~~~~~~ii~ 102 (424)
+++.+++.++.
T Consensus 205 a~~~Ga~~vi~ 215 (329)
T TIGR02822 205 ALALGAASAGG 215 (329)
T ss_pred HHHhCCceecc
Confidence 78888887764
No 240
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.57 E-value=2e+02 Score=28.40 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=56.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCc-cHHHHHHHHHHhCCeEecCCC-CCCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANP-VYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi-~~g~~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~-~~~~~~i~~~l~~~~~~~ii 101 (424)
+|+..+...+.... ...++ ..++++....|... --+..+++.+..|+..+..+. ...++.+...+++.++.++.
T Consensus 194 ~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~ 270 (542)
T PRK07786 194 LTHANLTGQAMTCL---RTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIF 270 (542)
T ss_pred hhHHHHHHHHHHHH---HhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEE
Confidence 57877765554433 33355 44555555444321 123557778889998876542 45788999999999999999
Q ss_pred EcccchHHHhc
Q 014435 102 TVPELWDKVKD 112 (424)
Q Consensus 102 ~~~~~~~~~~~ 112 (424)
..+..+..+..
T Consensus 271 ~~P~~l~~l~~ 281 (542)
T PRK07786 271 LVPAQWQAVCA 281 (542)
T ss_pred ehHHHHHHHHh
Confidence 98877766544
No 241
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=40.36 E-value=2.4e+02 Score=25.26 Aligned_cols=62 Identities=15% Similarity=0.073 Sum_probs=46.1
Q ss_pred HHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 42 RHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 42 ~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
.+.| +.+|+.|.. ...+-.-..+.++|.+.|..+..+=|...+......++..++++++++.
T Consensus 51 ~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 51 EKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 3445 467776544 5556667777788888998888777766666677889999999999875
No 242
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=40.10 E-value=1.3e+02 Score=22.39 Aligned_cols=41 Identities=10% Similarity=-0.004 Sum_probs=33.6
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 64 ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 64 ~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+....+-..|..++-+.+..+.+++...+.+.+|++|..+.
T Consensus 18 ~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 18 IVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 33344445799998999999999999999999999998864
No 243
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.93 E-value=3.2e+02 Score=27.06 Aligned_cols=83 Identities=12% Similarity=0.094 Sum_probs=60.9
Q ss_pred hhcHHHHHHHHHHHHhhhhh--ccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEE
Q 014435 181 ILTHKNFIAASLMISAHQEL--VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 257 (424)
.+|...+...+..+...... .-...+++...++....+ ...+++++..|+..+..+ .+..+.+...+++.++..+
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~--~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY--PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 57888888887777665542 233448888877765433 346788899999998775 4688999999999999999
Q ss_pred EechHHHH
Q 014435 258 WVVPPIIL 265 (424)
Q Consensus 258 ~~~p~~~~ 265 (424)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 88665544
No 244
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.85 E-value=4.1e+02 Score=26.84 Aligned_cols=83 Identities=13% Similarity=0.103 Sum_probs=58.0
Q ss_pred hhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-CCCC---HHHHHHHHHHccceE
Q 014435 181 ILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFD---IEMALRAIEKYRVTV 256 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~---~~~~~~~i~~~~~t~ 256 (424)
.+|.+.+...+..+.........+.+++...++-... +...+++++..|+.++.. +... ...+...+++.++..
T Consensus 55 ~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 132 (631)
T PRK07769 55 DLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLD--YLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSA 132 (631)
T ss_pred EeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChH--HHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCE
Confidence 4688888877777665554333445888888777543 334678889999988755 3222 467888999999999
Q ss_pred EEechHHHH
Q 014435 257 WWVVPPIIL 265 (424)
Q Consensus 257 ~~~~p~~~~ 265 (424)
++.......
T Consensus 133 vi~~~~~~~ 141 (631)
T PRK07769 133 ILTTTDSAE 141 (631)
T ss_pred EEEChHHHH
Confidence 988776544
No 245
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=39.18 E-value=3.7e+02 Score=26.15 Aligned_cols=100 Identities=11% Similarity=-0.021 Sum_probs=65.6
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhh-ccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL-VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG- 238 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~- 238 (424)
++.++++.-.. .+.. -.+|...+...+..+...... .....+++....+....+- ..+++++..|+.++..+
T Consensus 21 p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~--~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 21 GHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI--FCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEEcCc
Confidence 56666654321 1111 236777777776666554422 2233477777776655433 46778889998888775
Q ss_pred CCCHHHHHHHHHHccceEEEechHHHHH
Q 014435 239 KFDIEMALRAIEKYRVTVWWVVPPIILA 266 (424)
Q Consensus 239 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 266 (424)
...++.+...+++.+++.++..+.....
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPM 122 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHH
Confidence 4788999999999999999988765443
No 246
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=39.15 E-value=1.8e+02 Score=28.17 Aligned_cols=83 Identities=13% Similarity=0.101 Sum_probs=59.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCC--CCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPV--YTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~i~~~l~~~~~~~ii 101 (424)
+|++.+......+.. ..++..++++....|.... .+..+++++..|+..+..++. .....+...++..++..+.
T Consensus 161 ~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 237 (502)
T TIGR01734 161 ISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWV 237 (502)
T ss_pred EecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEE
Confidence 688887665544333 3577888887777666432 345577889999999888754 4567888889999999998
Q ss_pred EcccchHHH
Q 014435 102 TVPELWDKV 110 (424)
Q Consensus 102 ~~~~~~~~~ 110 (424)
..+.....+
T Consensus 238 ~~p~~~~~~ 246 (502)
T TIGR01734 238 STPSFVDMC 246 (502)
T ss_pred EChhHHHHH
Confidence 887765443
No 247
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=38.93 E-value=3.3e+02 Score=26.84 Aligned_cols=83 Identities=11% Similarity=0.070 Sum_probs=57.8
Q ss_pred hhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|+..+...+..+........ .+.+++...++-...+ ...+++++..|+..+..+. .....+...+++.++.+++
T Consensus 55 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 55 AVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY--GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 5788888777776655544322 2347777776665533 3467888999998886654 5778999999999999888
Q ss_pred echHHHH
Q 014435 259 VVPPIIL 265 (424)
Q Consensus 259 ~~p~~~~ 265 (424)
..+..+.
T Consensus 133 ~~~~~~~ 139 (546)
T PLN02330 133 TNDTNYG 139 (546)
T ss_pred Eccchhh
Confidence 7665443
No 248
>PLN02614 long-chain acyl-CoA synthetase
Probab=38.83 E-value=2.6e+02 Score=28.59 Aligned_cols=86 Identities=10% Similarity=-0.064 Sum_probs=62.5
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..++...... -.+.+++...++-..- +....++++..|+..+... .+.+..+...+++.++++++
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPE--WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 468888887777766555432 2334888887776553 3346778888898888764 47889999999999999999
Q ss_pred echHHHHHHH
Q 014435 259 VVPPIILALA 268 (424)
Q Consensus 259 ~~p~~~~~l~ 268 (424)
.....+..+.
T Consensus 157 ~~~~~~~~~~ 166 (666)
T PLN02614 157 VEEKKISELF 166 (666)
T ss_pred ECHHHHHHHH
Confidence 8876655553
No 249
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=38.72 E-value=2.4e+02 Score=27.30 Aligned_cols=69 Identities=10% Similarity=0.080 Sum_probs=45.8
Q ss_pred CCCcHHHHHHHHHHH--------------HHH-HHHcCCCCCCEEEEECCCCccHHHHHHH-HHHhCCeEecC-------
Q 014435 23 SDPSFSMFKSIVIKV--------------SHS-FRHLGITKKDVVLIFAPNSIHFPICFLG-VIAIGAIASTA------- 79 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~--------------a~~-L~~~gi~~g~~V~l~~~~~~~~~~~~lA-~~~~G~~~v~l------- 79 (424)
.+-||.+|.+.+..+ |.. +...++++||.| .+..++....+ +...|++++=+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccc
Confidence 345899999988655 333 335589999965 34444555555 78888877633
Q ss_pred -------CCCCCHHHHHHHHHhcC
Q 014435 80 -------NPVYTVSELSKQVKDSN 96 (424)
Q Consensus 80 -------~~~~~~~~i~~~l~~~~ 96 (424)
.-..+.+.++..++...
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 33578889998887643
No 250
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=38.58 E-value=2.3e+02 Score=28.01 Aligned_cols=83 Identities=13% Similarity=0.051 Sum_probs=59.4
Q ss_pred hhcHHHHHHHHHHHHhhhh--hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEE
Q 014435 181 ILTHKNFIAASLMISAHQE--LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 257 (424)
.+|+..+...+..+...+. .....++++...++-.-. +...+++++..|+..+..+ .+....+...+++.+++.+
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~v 127 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVL 127 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEE
Confidence 4688888877777666542 233344777777666543 3346788889999998664 4788999999999999999
Q ss_pred EechHHHH
Q 014435 258 WVVPPIIL 265 (424)
Q Consensus 258 ~~~p~~~~ 265 (424)
+.......
T Consensus 128 i~~~~~~~ 135 (560)
T PRK08751 128 VVIDNFGT 135 (560)
T ss_pred EEcchhHH
Confidence 88765543
No 251
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=38.58 E-value=1.8e+02 Score=27.14 Aligned_cols=86 Identities=12% Similarity=0.132 Sum_probs=50.8
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHH--HH-H-HHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIKV--SH-S-FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSEL 88 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~~--a~-~-L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i 88 (424)
+.......|+.+++.+........ |. . +...++++|++|+|......-.+++.+|- ..|+ .++.++. +++.
T Consensus 153 ~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak-~~G~~~Vi~~~~--~~~r- 228 (371)
T cd08281 153 SRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAV-AAGASQVVAVDL--NEDK- 228 (371)
T ss_pred cccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCcEEEEcC--CHHH-
Confidence 334555677888887654332222 11 1 23457999999999876555655555555 4587 3554543 3333
Q ss_pred HHHHHhcCCeEEEEc
Q 014435 89 SKQVKDSNPKLVITV 103 (424)
Q Consensus 89 ~~~l~~~~~~~ii~~ 103 (424)
..++++.+++.++..
T Consensus 229 ~~~a~~~Ga~~~i~~ 243 (371)
T cd08281 229 LALARELGATATVNA 243 (371)
T ss_pred HHHHHHcCCceEeCC
Confidence 445577888776653
No 252
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=38.53 E-value=1.9e+02 Score=29.29 Aligned_cols=96 Identities=14% Similarity=0.044 Sum_probs=65.6
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG- 238 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~- 238 (424)
++.++++... ..+|. .-.+|.+.+...+..++..+... -.+.+++...+|..-- ....+++++..|+..+...
T Consensus 66 p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e--~v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 66 GEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE--AVFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEecCC
Confidence 4556655432 22222 12468888888777776665432 2344888888877543 3346788889998888764
Q ss_pred CCCHHHHHHHHHHccceEEEech
Q 014435 239 KFDIEMALRAIEKYRVTVWWVVP 261 (424)
Q Consensus 239 ~~~~~~~~~~i~~~~~t~~~~~p 261 (424)
.+....+...+++.++.++++..
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 57889999999999999988754
No 253
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=38.46 E-value=60 Score=26.47 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=43.7
Q ss_pred cCceEEecCCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCC-HHHHHHHHHhCCCCeE
Q 014435 230 KGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLG-KELMEDCQKNIPGATI 308 (424)
Q Consensus 230 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~-~~~~~~~~~~~~~~~~ 308 (424)
..+.+++++......+.+.+ ..++..-+.-+.++..+++..... ..+.++.||.+-. ....+.+++.+|+..+
T Consensus 4 ~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~i 77 (172)
T PF03808_consen 4 NSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLRI 77 (172)
T ss_pred HhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeEE
Confidence 34556666554444444444 344433444455666666654322 3577778876533 3566688888888777
Q ss_pred Eecc
Q 014435 309 FQGY 312 (424)
Q Consensus 309 ~~~y 312 (424)
+-.|
T Consensus 78 vg~~ 81 (172)
T PF03808_consen 78 VGYH 81 (172)
T ss_pred EEec
Confidence 6543
No 254
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=38.46 E-value=2.7e+02 Score=28.10 Aligned_cols=102 Identities=16% Similarity=0.087 Sum_probs=67.7
Q ss_pred CCCEEEEecC--CCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-
Q 014435 161 QTDAAALLYS--SGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 237 (424)
Q Consensus 161 ~~~~~~i~~T--SGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~- 237 (424)
++.++++... .+++|. ...+|...+...+..++........+.+++...++-... +...+++++..|+..+..
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl~ 123 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPLF 123 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh--HHHHHHHHHHcCceeEecC
Confidence 4566665432 112232 235688888777776665554333445888888877653 445678899999988865
Q ss_pred CC-CC--HHHHHHHHHHccceEEEechHHHHH
Q 014435 238 GK-FD--IEMALRAIEKYRVTVWWVVPPIILA 266 (424)
Q Consensus 238 ~~-~~--~~~~~~~i~~~~~t~~~~~p~~~~~ 266 (424)
++ .. ++.+...+++.++..++..+..+..
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 33 22 6889999999999999988765543
No 255
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=38.28 E-value=4.2e+02 Score=27.14 Aligned_cols=102 Identities=14% Similarity=-0.024 Sum_probs=67.0
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-CCCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..+....... -.+.+++...++-..- +....++++..|+..+.. +.+.++.+...+++.+++.++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~ 153 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVF 153 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEE
Confidence 358888887777766555332 2334788777776543 334567888888888866 457889999999999999999
Q ss_pred echHHHHHHHhccccccCCCCCeeEEEec
Q 014435 259 VVPPIILALAKNSLVRKFDISSLKLVGSG 287 (424)
Q Consensus 259 ~~p~~~~~l~~~~~~~~~~~~~lr~~~~~ 287 (424)
.....+..+++... ...+.++.++.-
T Consensus 154 ~~~~~~~~~~~~~~---~~~~~l~~ii~~ 179 (660)
T PLN02430 154 VQDKKIKELLEPDC---KSAKRLKAIVSF 179 (660)
T ss_pred ECHHHHHHHHhhhc---ccCCCceEEEEE
Confidence 87765444443211 113456665543
No 256
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=37.96 E-value=88 Score=28.54 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=46.5
Q ss_pred HcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 43 HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 43 ~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
+.|..+++.|.... .+-.-..+.++|.+.|..++.+-|...+......++..+++++++...
T Consensus 45 ~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 45 KQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 33444456665554 456666777888899998888878777777789999999999999765
No 257
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=37.89 E-value=96 Score=25.55 Aligned_cols=47 Identities=4% Similarity=-0.097 Sum_probs=32.7
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHH
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVI 70 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~ 70 (424)
.-+||.|+.+.+.++|..+.+. ++....+.+...++-..++..+|-.
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~~ 61 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLPR 61 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHHH
Confidence 3489999999999999999874 2222335566666666666666543
No 258
>PRK10717 cysteine synthase A; Provisional
Probab=37.73 E-value=2.3e+02 Score=25.98 Aligned_cols=63 Identities=13% Similarity=0.033 Sum_probs=45.9
Q ss_pred HHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 42 RHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 42 ~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
.+.| +++|+.|.. ...+-.-..+.++|.+.|..+..+=|...++.....++..++++++++..
T Consensus 56 ~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 56 EKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 3445 467776544 55566667777788889988777767666677788999999999999753
No 259
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=37.65 E-value=2.1e+02 Score=27.58 Aligned_cols=62 Identities=15% Similarity=-0.016 Sum_probs=46.1
Q ss_pred HHcCC-CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 42 RHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 42 ~~~gi-~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
.+.|. .+|+.|.- +..+=.-..+.++|.+.|..+..+=|...+++....++..+++++++..
T Consensus 54 ~~~g~~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 54 EASGRLKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred HHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 34454 67776544 4556667777888899998888777765556677888999999999975
No 260
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.46 E-value=2.7e+02 Score=27.73 Aligned_cols=85 Identities=18% Similarity=0.070 Sum_probs=61.2
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|+..+...+.......... -...+++....+-... +...+++++..|+..+... .+....+...+++.++..++
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 134 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAI 134 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEE
Confidence 468888877777665554322 2334777777766544 3346788899999988774 47899999999999999999
Q ss_pred echHHHHHH
Q 014435 259 VVPPIILAL 267 (424)
Q Consensus 259 ~~p~~~~~l 267 (424)
........+
T Consensus 135 ~~~~~~~~~ 143 (573)
T PRK05605 135 VWDKVAPTV 143 (573)
T ss_pred echhhHHHH
Confidence 877765544
No 261
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=37.38 E-value=2.5e+02 Score=23.54 Aligned_cols=81 Identities=15% Similarity=0.052 Sum_probs=55.0
Q ss_pred CCcHHHHHHHHHHHHHHHH-------HcCCCCCCEEEEECCCC-cc---HHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 24 DPSFSMFKSIVIKVSHSFR-------HLGITKKDVVLIFAPNS-IH---FPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~-------~~gi~~g~~V~l~~~~~-~~---~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
.++..|.+-.+..+-..|. ..+-..+.+|.+.+..+ .+ ..++...+-..|.-++-+..+.+.+++...+
T Consensus 50 ~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~ 129 (201)
T cd02070 50 EIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAV 129 (201)
T ss_pred CeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 4788888777665554433 11221234666655554 22 3344444556799999999999999999999
Q ss_pred HhcCCeEEEEcc
Q 014435 93 KDSNPKLVITVP 104 (424)
Q Consensus 93 ~~~~~~~ii~~~ 104 (424)
++.+|++|..+.
T Consensus 130 ~~~~~d~v~lS~ 141 (201)
T cd02070 130 KEHKPDILGLSA 141 (201)
T ss_pred HHcCCCEEEEec
Confidence 999999998764
No 262
>PF08967 DUF1884: Domain of unknown function (DUF1884); InterPro: IPR014418 This group represents an uncharacterised conserved protein.; PDB: 2PK8_A.
Probab=37.24 E-value=54 Score=22.72 Aligned_cols=70 Identities=9% Similarity=0.139 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccchH
Q 014435 29 MFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 108 (424)
Q Consensus 29 el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~ 108 (424)
++.+.++..++.|+.-|+.|+ |.+..|.-++++..- ..-.+|..+ ..+++++.++||.|+..+.
T Consensus 9 ~il~~ie~~inELk~dG~ePD--ivL~G~ef~e~~~~~-~l~~~~lkv-------------y~i~ELg~DAVvaDSk~LG 72 (85)
T PF08967_consen 9 RILELIEEKINELKEDGFEPD--IVLVGPEFYEFLSEE-VLEVSGLKV-------------YVIEELGSDAVVADSKYLG 72 (85)
T ss_dssp HHHHHHHHHHHHHHHTT------EEEE-HHHHHHHHH----EETTEEE-------------EE-GGGTTEEEEE-TTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCCC--EEEEcHHHHHHHHHH-HHHhhCceE-------------EEHHhcCCceEEEchHHhc
Confidence 566778888999999999885 888888777765440 000012111 3467899999999999887
Q ss_pred HHhcCC
Q 014435 109 KVKDLN 114 (424)
Q Consensus 109 ~~~~~~ 114 (424)
++...+
T Consensus 73 ~~~~as 78 (85)
T PF08967_consen 73 QLKKAS 78 (85)
T ss_dssp TSTT-E
T ss_pred cccccc
Confidence 776554
No 263
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=37.24 E-value=2.1e+02 Score=31.60 Aligned_cols=84 Identities=10% Similarity=0.052 Sum_probs=60.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+++...+..... ..+++++|++...+|-. ..+....+..+..|...+..+.....+.+...+++.++.++..
T Consensus 813 ~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 889 (1140)
T PRK06814 813 LSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFG 889 (1140)
T ss_pred ecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEe
Confidence 688888666655544 34678899888887753 2333456677788998887765556667788899999999998
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+.....+.
T Consensus 890 ~p~~l~~l~ 898 (1140)
T PRK06814 890 TDTFLNGYA 898 (1140)
T ss_pred cHHHHHHHH
Confidence 876655443
No 264
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=37.15 E-value=2.9e+02 Score=26.74 Aligned_cols=83 Identities=13% Similarity=0.108 Sum_probs=58.8
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCC--CCHHHHHHHHHhcCCeEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPV--YTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~--~~~~~i~~~l~~~~~~~i 100 (424)
.+|++.+...+...+.. .++..++++....|-+... +...++.+..|...+..+.. ..+..+...++..++..+
T Consensus 162 ~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~ 238 (503)
T PRK04813 162 QISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVW 238 (503)
T ss_pred EeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEE
Confidence 37888888766655443 4677888877777665332 34556778889888877653 356778888999999999
Q ss_pred EEcccchHH
Q 014435 101 ITVPELWDK 109 (424)
Q Consensus 101 i~~~~~~~~ 109 (424)
...+.....
T Consensus 239 ~~~p~~~~~ 247 (503)
T PRK04813 239 VSTPSFADM 247 (503)
T ss_pred EeChHHHHH
Confidence 888766544
No 265
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=37.12 E-value=1.6e+02 Score=29.69 Aligned_cols=85 Identities=24% Similarity=0.349 Sum_probs=60.5
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHH-HHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICF-LGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~-lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
-+||+.+...+..+...+. -++++|++.-++|-.--+=-++ .++...|.+.+... .+...+..-++..+|.+++.
T Consensus 210 mLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~--~~~~~~~~dl~~~rPt~m~~ 285 (613)
T COG1022 210 MLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK--EDPRTLLEDLKEVRPTVMIG 285 (613)
T ss_pred EEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec--CCHHHHHHHHHHhCCeEEee
Confidence 4899999999988887775 4789999999999652222222 44444444434332 36778888899999999999
Q ss_pred cccchHHHhc
Q 014435 103 VPELWDKVKD 112 (424)
Q Consensus 103 ~~~~~~~~~~ 112 (424)
-+..++.+..
T Consensus 286 VPRvwE~i~~ 295 (613)
T COG1022 286 VPRVWEKVYK 295 (613)
T ss_pred chHHHHHHHH
Confidence 8877766544
No 266
>PRK06381 threonine synthase; Validated
Probab=37.11 E-value=1e+02 Score=28.11 Aligned_cols=56 Identities=7% Similarity=-0.107 Sum_probs=41.5
Q ss_pred CEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 50 DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 50 ~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
++|. ....+=.-+.+.++|...|..+..+=|...+......++..+++++++..++
T Consensus 64 ~~lv-~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 64 SGIT-VGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKY 119 (319)
T ss_pred CEEE-EeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCH
Confidence 3443 4456667777788888999888776665555566678999999999998653
No 267
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=36.54 E-value=1.2e+02 Score=27.16 Aligned_cols=65 Identities=28% Similarity=0.199 Sum_probs=51.0
Q ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEe-cCCCCCCHHHHHHHHHhcCCeEEEEcccchHH
Q 014435 45 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS-TANPVYTVSELSKQVKDSNPKLVITVPELWDK 109 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v-~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~ 109 (424)
.+++||.|.=-..||.---.++-=|-..|...+ .+..+-..+++...|+.++++.+|+++++...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 678999988888888666666666666776555 45667788999999999999999999876643
No 268
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=36.29 E-value=3.3e+02 Score=26.85 Aligned_cols=86 Identities=12% Similarity=0.001 Sum_probs=62.1
Q ss_pred hhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..+........ .+.+++....+-...+ ...+++++..|+..+..+ ......+...+++.+++.++
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~ 123 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLV 123 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEE
Confidence 5788888777776665554322 2337777776665543 346788899999988775 47889999999999999999
Q ss_pred echHHHHHHH
Q 014435 259 VVPPIILALA 268 (424)
Q Consensus 259 ~~p~~~~~l~ 268 (424)
..+.....+.
T Consensus 124 ~~~~~~~~~~ 133 (542)
T PRK06155 124 VEAALLAALE 133 (542)
T ss_pred EChhhHHHHH
Confidence 8877665543
No 269
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=36.01 E-value=2.9e+02 Score=23.86 Aligned_cols=65 Identities=12% Similarity=0.063 Sum_probs=45.6
Q ss_pred HHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 41 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 41 L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
+.+.|..+++.|... ..+-.-..+.++|...|..+..+-|...+......++..+++++.++..+
T Consensus 42 a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~ 106 (244)
T cd00640 42 AEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDF 106 (244)
T ss_pred HHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 334443245555444 33556677777888899888877776667777888999999999998763
No 270
>PLN03102 acyl-activating enzyme; Provisional
Probab=35.98 E-value=2.7e+02 Score=27.80 Aligned_cols=83 Identities=10% Similarity=0.069 Sum_probs=59.6
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..+....... -.+.+++...+|-.- .+...+++++..|++++... ..+.+.+...++..+++.++
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii 116 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILF 116 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEE
Confidence 468888777776665554332 234488888777544 33346778889998888775 47899999999999999999
Q ss_pred echHHHH
Q 014435 259 VVPPIIL 265 (424)
Q Consensus 259 ~~p~~~~ 265 (424)
..+....
T Consensus 117 ~~~~~~~ 123 (579)
T PLN03102 117 VDRSFEP 123 (579)
T ss_pred EChhhHH
Confidence 8765443
No 271
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=35.96 E-value=3.1e+02 Score=25.80 Aligned_cols=82 Identities=16% Similarity=0.240 Sum_probs=50.9
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCC--CCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGIT--KKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~--~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 99 (424)
.+|++.+...+..++..+ ++. +.+++..++|-.. -+...++..+..|+.++.... .++..+...++.. ++
T Consensus 114 ~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~-~~~~~~l~~i~~~--t~ 187 (386)
T TIGR02372 114 THSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA-APASGIMRHARPG--DL 187 (386)
T ss_pred EeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC-CChHHHHHhhccC--CE
Confidence 479999988887777655 443 3356776776542 334455667778998887654 5555544444422 56
Q ss_pred EEEcccchHHHh
Q 014435 100 VITVPELWDKVK 111 (424)
Q Consensus 100 ii~~~~~~~~~~ 111 (424)
++..+..+..+.
T Consensus 188 ~~~~P~~l~~l~ 199 (386)
T TIGR02372 188 IVGTPFIWEQLA 199 (386)
T ss_pred EEECcHHHHHHH
Confidence 666666655543
No 272
>PRK07867 acyl-CoA synthetase; Validated
Probab=35.90 E-value=3.1e+02 Score=27.02 Aligned_cols=83 Identities=13% Similarity=-0.015 Sum_probs=59.5
Q ss_pred hhcHHHHHHHHHHHHhhhhhc--cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEE
Q 014435 181 ILTHKNFIAASLMISAHQELV--GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 257 (424)
.+|...+...+..+....... ....+++...++-.- .+...+++++..|+.++..+ ...++.+...+++.+++.+
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 478888887777776666543 233466666665433 33356788899999998665 4688999999999999999
Q ss_pred EechHHHH
Q 014435 258 WVVPPIIL 265 (424)
Q Consensus 258 ~~~p~~~~ 265 (424)
+.......
T Consensus 106 i~~~~~~~ 113 (529)
T PRK07867 106 LTESAHAE 113 (529)
T ss_pred EECHhHHH
Confidence 98876554
No 273
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=35.18 E-value=3.1e+02 Score=31.04 Aligned_cols=99 Identities=13% Similarity=-0.017 Sum_probs=65.0
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
.|+.++++...+...+......+|++.+...+..++...... ..+++++...++-...+ ...+++++..|+..+..+
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~--i~~~lA~l~~G~~~vpld 326 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL--VVAVMGVLKAGATFSVID 326 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH--HHHHHHHHhhCcEEeccC
Confidence 466777665322111111233578998888887776655432 23347777777665433 346789999999998776
Q ss_pred C-CCHHHHHHHHHHccceEEEec
Q 014435 239 K-FDIEMALRAIEKYRVTVWWVV 260 (424)
Q Consensus 239 ~-~~~~~~~~~i~~~~~t~~~~~ 260 (424)
+ ..+.++...+++.++..++..
T Consensus 327 p~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 327 PAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCCcHHHHHHHHHhcCCCEEEEe
Confidence 5 567888888898888877764
No 274
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=35.05 E-value=3.6e+02 Score=26.60 Aligned_cols=78 Identities=15% Similarity=0.166 Sum_probs=56.2
Q ss_pred hhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..+...+.... .+.+++...+|..- .+...+++++..|+.++..++ .....+...+++.++.+++
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 126 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC--EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFF 126 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEE
Confidence 4688888877777666554332 23478877776654 333467889999998887654 6788999999999999887
Q ss_pred ec
Q 014435 259 VV 260 (424)
Q Consensus 259 ~~ 260 (424)
..
T Consensus 127 ~~ 128 (547)
T PRK06087 127 AP 128 (547)
T ss_pred Ee
Confidence 64
No 275
>PRK07798 acyl-CoA synthetase; Validated
Probab=35.03 E-value=4.4e+02 Score=25.69 Aligned_cols=86 Identities=7% Similarity=-0.096 Sum_probs=59.3
Q ss_pred hhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..+........ ..++++....+-.- .+...+++++..|+..+..+. .....+...+++.++..++
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI--EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 4778887777766665554322 23466666654433 333467888899999887754 6889999999999999998
Q ss_pred echHHHHHHH
Q 014435 259 VVPPIILALA 268 (424)
Q Consensus 259 ~~p~~~~~l~ 268 (424)
..+.....+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8776554443
No 276
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=34.96 E-value=2.9e+02 Score=24.70 Aligned_cols=65 Identities=11% Similarity=-0.004 Sum_probs=47.2
Q ss_pred HHHcCC-CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 41 FRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 41 L~~~gi-~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
+.+.|. ++|+.|.. ...+-.-..+.++|.+.|..+..+=|...+......++..++++++++...
T Consensus 44 a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 44 AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 344453 35665544 566677778888888999888877676655666788999999999997654
No 277
>PRK07514 malonyl-CoA synthase; Validated
Probab=34.59 E-value=3.3e+02 Score=26.39 Aligned_cols=84 Identities=11% Similarity=-0.005 Sum_probs=59.3
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..+....... -.+.+++....+-.. .+...+++++..|+..+..+ ......+...+++.+++.++
T Consensus 28 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 28 RYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 567777777666665554332 233477777766543 34456788899999888775 46889999999999999998
Q ss_pred echHHHHH
Q 014435 259 VVPPIILA 266 (424)
Q Consensus 259 ~~p~~~~~ 266 (424)
..+.....
T Consensus 106 ~~~~~~~~ 113 (504)
T PRK07514 106 CDPANFAW 113 (504)
T ss_pred EccchhHH
Confidence 88765544
No 278
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=34.29 E-value=2.3e+02 Score=24.14 Aligned_cols=20 Identities=5% Similarity=-0.094 Sum_probs=18.6
Q ss_pred CcHHHHHHHHHHHHHHHHHc
Q 014435 25 PSFSMFKSIVIKVSHSFRHL 44 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~ 44 (424)
+|+.|+.+++.++|..+.+.
T Consensus 28 is~e~I~~~i~~LA~~I~~~ 47 (211)
T PTZ00271 28 VTQEQVWAATAKCAKKIAED 47 (211)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999864
No 279
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=34.27 E-value=2.4e+02 Score=26.60 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=44.4
Q ss_pred EECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 54 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 54 l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
+++.-+=+...+.+|+.++|+.+..+=|..++...-+.+++.++.+++.-.++
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDW 170 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccH
Confidence 34444556788999999999999999899999888899999999999986654
No 280
>PRK10595 SOS cell division inhibitor; Provisional
Probab=34.20 E-value=1.5e+02 Score=24.00 Aligned_cols=14 Identities=14% Similarity=0.366 Sum_probs=7.0
Q ss_pred HHHHHhcCCeEEEE
Q 014435 89 SKQVKDSNPKLVIT 102 (424)
Q Consensus 89 ~~~l~~~~~~~ii~ 102 (424)
++.|+.-.+.+|++
T Consensus 99 EqaLrsG~~~aVL~ 112 (164)
T PRK10595 99 ERALRTGNYSVVLG 112 (164)
T ss_pred HHHHhhCCCcEEEE
Confidence 44444445555554
No 281
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=33.98 E-value=2.4e+02 Score=28.55 Aligned_cols=96 Identities=13% Similarity=0.037 Sum_probs=64.9
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG- 238 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~- 238 (424)
++.++++.. +..+|. .-.+|.+.+...+..++...... -.+.+++...+|..--+ ...+++++..|+..+...
T Consensus 67 p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 67 PEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCC
Confidence 456665542 222222 23468888887777666555432 23448888888775533 346788888998887764
Q ss_pred CCCHHHHHHHHHHccceEEEech
Q 014435 239 KFDIEMALRAIEKYRVTVWWVVP 261 (424)
Q Consensus 239 ~~~~~~~~~~i~~~~~t~~~~~p 261 (424)
.+....+...+++.++.++++..
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 57889999999999999998754
No 282
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=33.78 E-value=73 Score=30.64 Aligned_cols=66 Identities=20% Similarity=0.319 Sum_probs=45.5
Q ss_pred cCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccchHH
Q 014435 44 LGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDK 109 (424)
Q Consensus 44 ~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~ 109 (424)
-|..+...|...-|+ ++..+.+=|-=+..-+..+|++.++.-+.+..+++..+|+++++.+++-..
T Consensus 413 ~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeaytqp 479 (653)
T KOG1138|consen 413 WGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYTQP 479 (653)
T ss_pred hcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhcCC
Confidence 355544445544442 444444444445556788889999999999999999999999998765443
No 283
>PRK13391 acyl-CoA synthetase; Provisional
Probab=33.78 E-value=4.6e+02 Score=25.54 Aligned_cols=99 Identities=9% Similarity=0.061 Sum_probs=66.4
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
.++.++.+...++ -.+|...+...+..+........ ...+++....+-...+ ...+++++..|+.++..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY--LEVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhccEEeccc
Confidence 3566676654433 13677777777666655554322 2236776666654433 346778899999998775
Q ss_pred C-CCHHHHHHHHHHccceEEEechHHHHHH
Q 014435 239 K-FDIEMALRAIEKYRVTVWWVVPPIILAL 267 (424)
Q Consensus 239 ~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l 267 (424)
. .+...+...+++.++..+...+.....+
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 4 6889999999999999998887665443
No 284
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=33.23 E-value=3.3e+02 Score=24.91 Aligned_cols=95 Identities=15% Similarity=0.210 Sum_probs=62.1
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHH---HHH-cCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKVSHS---FRH-LGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~a~~---L~~-~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
......|+.+|+.|-...-...... |.+ .++++|++|.+..-. +.-.++.++|-..-..+++... +.++..
T Consensus 106 ~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~---s~~k~~- 181 (326)
T COG0604 106 DWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVS---SSEKLE- 181 (326)
T ss_pred HHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEec---CHHHHH-
Confidence 4445568889998877664332221 223 478999999999865 5778888887765334333332 456666
Q ss_pred HHHhcCCeEEEEc--ccchHHHhcCC
Q 014435 91 QVKDSNPKLVITV--PELWDKVKDLN 114 (424)
Q Consensus 91 ~l~~~~~~~ii~~--~~~~~~~~~~~ 114 (424)
.+++.+++.++.- .++.+.++++.
T Consensus 182 ~~~~lGAd~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 182 LLKELGADHVINYREEDFVEQVRELT 207 (326)
T ss_pred HHHhcCCCEEEcCCcccHHHHHHHHc
Confidence 8999999999973 33566665554
No 285
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=33.20 E-value=1.5e+02 Score=22.16 Aligned_cols=41 Identities=15% Similarity=0.280 Sum_probs=31.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCe
Q 014435 35 IKVSHSFRHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAI 75 (424)
Q Consensus 35 ~~~a~~L~~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~ 75 (424)
..+...+.+.|+.+++.|.+++.. +.....+.+.+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 455666777789999999999988 57777777777888865
No 286
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.03 E-value=3.9e+02 Score=25.92 Aligned_cols=85 Identities=13% Similarity=0.083 Sum_probs=58.4
Q ss_pred hhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+........... ..++++....+-+..+ ...+++++..|+..+..++ +....+...+++.+++.++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii 88 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEF--FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLI 88 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEE
Confidence 3567777666666555444322 2347777776665432 2467888999998887754 6788999999999999998
Q ss_pred echHHHHHH
Q 014435 259 VVPPIILAL 267 (424)
Q Consensus 259 ~~p~~~~~l 267 (424)
..+.....+
T Consensus 89 ~~~~~~~~~ 97 (502)
T PRK08276 89 VSAALADTA 97 (502)
T ss_pred EccchhhHH
Confidence 887665544
No 287
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=32.64 E-value=2.2e+02 Score=25.85 Aligned_cols=82 Identities=12% Similarity=0.080 Sum_probs=48.2
Q ss_pred CCCCCCCcHHHHHHHHHHHHH---HHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhc
Q 014435 19 LVLPSDPSFSMFKSIVIKVSH---SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDS 95 (424)
Q Consensus 19 ~~~~~~~Ty~el~~~~~~~a~---~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~ 95 (424)
...++.+++.+.......... .+...++++|++|.+......-..+..+|....|+.++.+.. +.+. ...++..
T Consensus 130 ~~~p~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~--~~~~-~~~~~~~ 206 (338)
T PRK09422 130 VKVPEGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDI--NDDK-LALAKEV 206 (338)
T ss_pred EeCCCCCCHHHeehhhcchhHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeC--ChHH-HHHHHHc
Confidence 345556666654333222111 133457899999999986556666667766656877665543 3333 3334667
Q ss_pred CCeEEEEc
Q 014435 96 NPKLVITV 103 (424)
Q Consensus 96 ~~~~ii~~ 103 (424)
+++.++..
T Consensus 207 g~~~v~~~ 214 (338)
T PRK09422 207 GADLTINS 214 (338)
T ss_pred CCcEEecc
Confidence 77666543
No 288
>PRK05939 hypothetical protein; Provisional
Probab=32.55 E-value=2.1e+02 Score=27.11 Aligned_cols=12 Identities=0% Similarity=0.105 Sum_probs=5.8
Q ss_pred HHhcCCeEEEEc
Q 014435 92 VKDSNPKLVITV 103 (424)
Q Consensus 92 l~~~~~~~ii~~ 103 (424)
++..+.++.+++
T Consensus 106 l~~~G~~v~~v~ 117 (397)
T PRK05939 106 LRGLGVEVTMVD 117 (397)
T ss_pred HHhcCCEEEEEC
Confidence 344455555444
No 289
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=32.23 E-value=2.4e+02 Score=25.64 Aligned_cols=84 Identities=23% Similarity=0.394 Sum_probs=49.9
Q ss_pred CCCCCCCCCCcHHHHHHHHHHH--H-HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe-EecCCCCCCHHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKV--S-HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI-ASTANPVYTVSELSKQ 91 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~--a-~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~i~~~ 91 (424)
......|+.+++.+.......+ | +.+...++.+|++|+|......-.+++++| -..|+. ++.++. +.+. ..+
T Consensus 128 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~a-k~~G~~~vi~~~~--~~~~-~~~ 203 (339)
T cd08239 128 KTLIPLPDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGLGALMLA-RALGAEDVIGVDP--SPER-LEL 203 (339)
T ss_pred HHeEECCCCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECC--CHHH-HHH
Confidence 3444567778887654432222 2 224556889999999996644555555554 456877 555543 3333 345
Q ss_pred HHhcCCeEEEEc
Q 014435 92 VKDSNPKLVITV 103 (424)
Q Consensus 92 l~~~~~~~ii~~ 103 (424)
+++.+++.++..
T Consensus 204 ~~~~ga~~~i~~ 215 (339)
T cd08239 204 AKALGADFVINS 215 (339)
T ss_pred HHHhCCCEEEcC
Confidence 577788777654
No 290
>PRK06060 acyl-CoA synthetase; Validated
Probab=32.10 E-value=1.9e+02 Score=29.73 Aligned_cols=85 Identities=16% Similarity=0.106 Sum_probs=58.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+......+.. ...++.++|++....+-.. .+...++..+..|+.++..+....++.+..++++.++.++..
T Consensus 165 ~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~ 242 (705)
T PRK06060 165 HRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYG 242 (705)
T ss_pred EccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEee
Confidence 577776655543322 2346778887776665432 233455677888988887776677888888999999999998
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 243 ~P~~l~~l~ 251 (705)
T PRK06060 243 VPNFFARVI 251 (705)
T ss_pred HHHHHHHHH
Confidence 877665543
No 291
>PLN02356 phosphateglycerate kinase
Probab=32.07 E-value=2.7e+02 Score=26.67 Aligned_cols=62 Identities=13% Similarity=-0.092 Sum_probs=44.3
Q ss_pred HHHcCC-CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 41 FRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 41 L~~~gi-~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+.+.|. +++..|. ....+=.-+.+.++|...|..+..+=|...+.+....++.+++++++++
T Consensus 95 a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 95 ALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred HHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 334443 4666554 3333444778888888899888877676666666789999999999985
No 292
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=31.98 E-value=2.2e+02 Score=21.44 Aligned_cols=41 Identities=7% Similarity=-0.037 Sum_probs=33.9
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 64 ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 64 ~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
++...+-..|..++.+.+..+.+++...+.+.+|++|..+.
T Consensus 18 ~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 18 VIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 33344556699999999999999999999999999999874
No 293
>PRK07476 eutB threonine dehydratase; Provisional
Probab=31.75 E-value=2.6e+02 Score=25.49 Aligned_cols=50 Identities=10% Similarity=0.013 Sum_probs=38.7
Q ss_pred CCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 57 PNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 57 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
..+=.-..+.++|.+.|..+..+=|...+......++..+++++++....
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQ 123 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 44556677778888999887777676666667788899999999998643
No 294
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=31.64 E-value=2.2e+02 Score=25.41 Aligned_cols=55 Identities=16% Similarity=0.186 Sum_probs=33.2
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC----------CCCHHHHHHHHHh-cCCeEEEEc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP----------VYTVSELSKQVKD-SNPKLVITV 103 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~i~~~l~~-~~~~~ii~~ 103 (424)
+++||+|.+.-+. . .....++...|+.++.+++ ..+.+++...+++ .++++++..
T Consensus 96 ~~~gd~Vlv~~~~-h--~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNC-H--KSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCc-h--HHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5678877765442 2 2234455667877766644 2457778877764 456665554
No 295
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=31.35 E-value=1.5e+02 Score=30.52 Aligned_cols=59 Identities=17% Similarity=0.121 Sum_probs=43.1
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCC---------C-----HHHHHHHHHhc-CCe----EEEEcccc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY---------T-----VSELSKQVKDS-NPK----LVITVPEL 106 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~i~~~l~~~-~~~----~ii~~~~~ 106 (424)
+++||.| |+-+|+--.+.. |+..+|+.++-+.|.. + ++.++..++.. +++ ++|+++.+
T Consensus 232 ~~~Gd~V-LvdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 232 APAGSTV-LIDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred cCCCCEE-EeecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 6789854 577888777655 9999999999988753 3 67788877765 334 77777654
Q ss_pred h
Q 014435 107 W 107 (424)
Q Consensus 107 ~ 107 (424)
.
T Consensus 309 d 309 (714)
T PRK15400 309 D 309 (714)
T ss_pred c
Confidence 3
No 296
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=30.97 E-value=1.1e+02 Score=20.15 Aligned_cols=30 Identities=10% Similarity=0.170 Sum_probs=22.1
Q ss_pred eeEEEecCCcchhhhhccccCceEEEecCCce
Q 014435 362 GEIWVRGPNVTPVFELTVNCNLFSYFRSNDHN 393 (424)
Q Consensus 362 Gel~v~~~~~~~gy~~~~~TgD~g~~~~~g~~ 393 (424)
|.+|++-.. ...|.|+..||-..+..++++
T Consensus 25 G~vWlT~~g--~~~D~~L~~G~~l~l~~g~~v 54 (63)
T PF11142_consen 25 GRVWLTREG--DPDDYWLQAGDSLRLRRGGRV 54 (63)
T ss_pred ccEEEECCC--CCCCEEECCCCEEEeCCCCEE
Confidence 899998654 334778888888888776653
No 297
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=30.87 E-value=3.2e+02 Score=26.55 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=48.7
Q ss_pred HcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccchHHHh
Q 014435 43 HLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 111 (424)
Q Consensus 43 ~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~ 111 (424)
..++.+++++....|-... .....+..+..|+..+.. +..+++++...+++.++.++...+..+..+.
T Consensus 190 ~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 258 (509)
T PRK12406 190 IYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFIRLL 258 (509)
T ss_pred hcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHHHHH
Confidence 4578899988777664322 223334456778887765 4568899999999999999999887766554
No 298
>PRK06145 acyl-CoA synthetase; Validated
Probab=30.24 E-value=3.7e+02 Score=25.95 Aligned_cols=84 Identities=14% Similarity=0.204 Sum_probs=58.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|+..+...+. ......++..++++....|-.. .+....++++..|+..+.. +...+..+...+++.++.++..
T Consensus 169 ~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~ 244 (497)
T PRK06145 169 HSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH-REFDPEAVLAAIERHRLTCAWM 244 (497)
T ss_pred EecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-CcCCHHHHHHHHHHhCCeEEEe
Confidence 68888765433 3344558899998887776432 2223345667778877655 4568888999999999999998
Q ss_pred cccchHHHhc
Q 014435 103 VPELWDKVKD 112 (424)
Q Consensus 103 ~~~~~~~~~~ 112 (424)
.+.....+..
T Consensus 245 ~P~~~~~ll~ 254 (497)
T PRK06145 245 APVMLSRVLT 254 (497)
T ss_pred hHHHHHHHHc
Confidence 8876665543
No 299
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=29.83 E-value=3.3e+02 Score=22.75 Aligned_cols=90 Identities=14% Similarity=0.180 Sum_probs=52.6
Q ss_pred cEEEEecc-hHHHHHHHHHHHHHhhcCceEEec-CCCCHHHHHHHHHHccceEEEechHH------HHHHHhccccccCC
Q 014435 206 HVVLCVLP-MFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPI------ILALAKNSLVRKFD 277 (424)
Q Consensus 206 ~~~~~~~p-~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~------~~~l~~~~~~~~~~ 277 (424)
..++...+ -.|..|.......--..|-.++.. ....++++.+.+.+.+++++..+-++ +..+++.......
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~- 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL- 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC-
Confidence 44444444 477777754333333677777654 45788999999999999987765422 2222222221110
Q ss_pred CCCeeEEEecCCCCCHHHHH
Q 014435 278 ISSLKLVGSGAAPLGKELME 297 (424)
Q Consensus 278 ~~~lr~~~~~g~~~~~~~~~ 297 (424)
...+ .+++||.+++.+..+
T Consensus 163 ~~~~-~i~vGG~~~~~~~~~ 181 (201)
T cd02070 163 RDKV-KVMVGGAPVNQEFAD 181 (201)
T ss_pred CcCC-eEEEECCcCCHHHHH
Confidence 1122 367888888876433
No 300
>PRK08162 acyl-CoA synthetase; Validated
Probab=29.76 E-value=3.8e+02 Score=26.36 Aligned_cols=85 Identities=11% Similarity=0.019 Sum_probs=60.9
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..+.....-. -...+++...++-... +...+++++..|+..+..+ ......+...+++.+++.++
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~ 120 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA--MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLI 120 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH--HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEE
Confidence 478888877777666555322 2334788777776553 3346788888898888775 47889999999999999999
Q ss_pred echHHHHHH
Q 014435 259 VVPPIILAL 267 (424)
Q Consensus 259 ~~p~~~~~l 267 (424)
..+.....+
T Consensus 121 ~~~~~~~~~ 129 (545)
T PRK08162 121 VDTEFAEVA 129 (545)
T ss_pred EccchhhHH
Confidence 887665443
No 301
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=29.05 E-value=84 Score=21.35 Aligned_cols=27 Identities=7% Similarity=0.193 Sum_probs=22.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCC
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGIT 47 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~ 47 (424)
.++.+|.++|.+.++++.+++++.|.-
T Consensus 27 ~g~~l~~~~l~~~~~~l~~~y~~~GY~ 53 (76)
T PF08479_consen 27 IGRCLTLADLQQLADALTNYYREKGYI 53 (76)
T ss_dssp TTSBB-HHHHHHHHHHHHHHHHHTT-T
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHcCce
Confidence 567899999999999999999999863
No 302
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=29.00 E-value=2e+02 Score=21.10 Aligned_cols=48 Identities=10% Similarity=0.005 Sum_probs=34.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecC
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA 79 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l 79 (424)
+.+.++.+ .+.+.+..+++.|.++|.++.....+...+.+.|..-+-.
T Consensus 43 iP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 43 IPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred CCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 56665543 3455555667789999999888888888888888765533
No 303
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=28.88 E-value=2.9e+02 Score=26.34 Aligned_cols=64 Identities=13% Similarity=0.094 Sum_probs=50.6
Q ss_pred HHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecC--CCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 40 SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA--NPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 40 ~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
.+.+..-=+|-+|+.+.+-.+...+.+..+...|+.+... ||..+.+++...|.+.+..+.-..
T Consensus 23 ~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~ 88 (406)
T TIGR00936 23 RFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWR 88 (406)
T ss_pred HHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEec
Confidence 3333333468899999999999999999999999976644 787788999999998888876543
No 304
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.64 E-value=3.5e+02 Score=26.78 Aligned_cols=81 Identities=15% Similarity=0.186 Sum_probs=57.8
Q ss_pred hhcHHHHHHHHHHHHhhhh--hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEE
Q 014435 181 ILTHKNFIAASLMISAHQE--LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVW 257 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 257 (424)
.+|...+...+..+..... ......+++....+-.. .+...+++++..|+..+..++ .....+...+++.+++.+
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 125 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLL--QYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAI 125 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEE
Confidence 5688888777777766653 22333477776665543 333467888999999997754 678999999999999999
Q ss_pred EechHH
Q 014435 258 WVVPPI 263 (424)
Q Consensus 258 ~~~p~~ 263 (424)
...+..
T Consensus 126 i~~~~~ 131 (560)
T PRK08974 126 VIVSNF 131 (560)
T ss_pred EEeccc
Confidence 876643
No 305
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=28.44 E-value=3.5e+02 Score=25.07 Aligned_cols=84 Identities=5% Similarity=-0.029 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC---------CCHHHHHHHHHhcCCe
Q 014435 28 SMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV---------YTVSELSKQVKDSNPK 98 (424)
Q Consensus 28 ~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~~~~~i~~~l~~~~~~ 98 (424)
.++......++..|.+. +| | +.++..++.+.+++.+|+...++.++-+... .+.+..++++....--
T Consensus 50 ~~~~~~~~~~~~~~~~~--~P-d-~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~la~l 125 (346)
T PF02350_consen 50 KSTGLAIIELADVLERE--KP-D-AVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKLAHL 125 (346)
T ss_dssp HHHHHHHHHHHHHHHHH--T--S-EEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH-SE
T ss_pred HHHHHHHHHHHHHHHhc--CC-C-EEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhhhhh
Confidence 55666677777777775 33 5 4456667899999999999999999988776 6677788888877666
Q ss_pred EEEEcccchHHHhcCCC
Q 014435 99 LVITVPELWDKVKDLNL 115 (424)
Q Consensus 99 ~ii~~~~~~~~~~~~~~ 115 (424)
....++.....+.....
T Consensus 126 hf~~t~~~~~~L~~~G~ 142 (346)
T PF02350_consen 126 HFAPTEEARERLLQEGE 142 (346)
T ss_dssp EEESSHHHHHHHHHTT-
T ss_pred hccCCHHHHHHHHhcCC
Confidence 65656666666666653
No 306
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=28.36 E-value=46 Score=20.23 Aligned_cols=23 Identities=26% Similarity=0.247 Sum_probs=19.9
Q ss_pred eEEEecCCCCCHHHHHHHHHhCC
Q 014435 282 KLVGSGAAPLGKELMEDCQKNIP 304 (424)
Q Consensus 282 r~~~~~g~~~~~~~~~~~~~~~~ 304 (424)
+.+.++|.|++.+....++..|+
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~ 44 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFG 44 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHh
Confidence 56889999999999999988874
No 307
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=28.20 E-value=1.9e+02 Score=20.03 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=31.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe
Q 014435 36 KVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 75 (424)
Q Consensus 36 ~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~ 75 (424)
.+...+...++.+++.|.+++.++.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 3445556668889999999998888887777778888866
No 308
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=28.09 E-value=1.9e+02 Score=23.14 Aligned_cols=36 Identities=6% Similarity=0.033 Sum_probs=25.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF 62 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~ 62 (424)
+||.|+.+.++++|..+.+.| +-+.|.-.+..+.-+
T Consensus 10 is~~~i~~~i~~la~~I~~~~--~~d~vvgv~~GG~~f 45 (156)
T PRK09177 10 VSWDQLHRDARALAWRLLPAG--QWKGIIAVTRGGLVP 45 (156)
T ss_pred cCHHHHHHHHHHHHHHHHhhC--CCCEEEEEecCCeeh
Confidence 799999999999999998764 235444444444433
No 309
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=28.07 E-value=3.5e+02 Score=23.51 Aligned_cols=88 Identities=17% Similarity=0.202 Sum_probs=54.5
Q ss_pred HhhcCceEEecCCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCC-------CCHHHHHHH
Q 014435 227 QLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAP-------LGKELMEDC 299 (424)
Q Consensus 227 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~-------~~~~~~~~~ 299 (424)
-+.-|.++++-.......+.+.|.+...|++.-.+..+..|... ++++.++.||.. ..+...+.+
T Consensus 90 lI~~gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~~l 161 (240)
T PRK10411 90 WIEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLISQL 161 (240)
T ss_pred hCCCCCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHHHH
Confidence 34556666665555556666777555566666666666666433 456778888853 234556666
Q ss_pred HHhCCCCeEEecccCccCCCcee
Q 014435 300 QKNIPGATIFQGYGMTETCAPIS 322 (424)
Q Consensus 300 ~~~~~~~~~~~~yG~tE~~~~~~ 322 (424)
++...+.-+...-|.++-+++..
T Consensus 162 ~~~~~d~afis~~gi~~~~G~~~ 184 (240)
T PRK10411 162 KSLEIDLFIFSCEGIDSSGALWD 184 (240)
T ss_pred HhcCCCEEEEeceeECCCCCccc
Confidence 66555778888888875454443
No 310
>PLN02409 serine--glyoxylate aminotransaminase
Probab=27.97 E-value=2.9e+02 Score=26.08 Aligned_cols=75 Identities=8% Similarity=0.007 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCccHHH-HHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 28 SMFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPI-CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 28 ~el~~~~~~~a~~L~~~-gi~~g~~V~l~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
.++.+...++...|.+. |.+.++.| ++..++...+. ++..++..|-.++..++.........+++..+.+++...
T Consensus 38 ~~~~~~~~~~~~~l~~~~g~~~~~~v-i~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFKTKSGTPF-IFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEE-EEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 45555555555555543 55544444 44334433333 333445566666666655544445566777777776664
No 311
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=27.95 E-value=3.9e+02 Score=26.23 Aligned_cols=76 Identities=17% Similarity=0.058 Sum_probs=52.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCC-CCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCC-CC--CHHHHHHHHHhcCCeE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGIT-KKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANP-VY--TVSELSKQVKDSNPKL 99 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~-~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~-~~--~~~~i~~~l~~~~~~~ 99 (424)
+|++.+...+..+... .++. ++|++....|-... -+..+++.+..|+.++..+. .. .+..+...+++.++.+
T Consensus 172 ~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~ 248 (525)
T PRK05851 172 LSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATL 248 (525)
T ss_pred ecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeE
Confidence 6888887766655443 4677 78888887776533 22356778888999887653 12 4567788889999987
Q ss_pred EEEc
Q 014435 100 VITV 103 (424)
Q Consensus 100 ii~~ 103 (424)
+.+.
T Consensus 249 ~~~p 252 (525)
T PRK05851 249 TAAP 252 (525)
T ss_pred EeCC
Confidence 6443
No 312
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=27.87 E-value=2e+02 Score=25.83 Aligned_cols=55 Identities=9% Similarity=0.277 Sum_probs=44.1
Q ss_pred CCCcHHHHHHH------HHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEe
Q 014435 23 SDPSFSMFKSI------VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 77 (424)
Q Consensus 23 ~~~Ty~el~~~------~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v 77 (424)
..+.|.++.+. ...++..+...|+.+++.|.++|..+.......+|+-.+|....
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 34788888872 22344445578999999999999999999999999999997665
No 313
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=27.81 E-value=4e+02 Score=24.50 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=13.3
Q ss_pred HHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 70 IAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 70 ~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+.-|-.++.-+|.+.. .....+..+.+++-+
T Consensus 97 ~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v 127 (351)
T PRK14807 97 INKGDVVIYPHPSFAM--YSVYSKIAGAVEIPV 127 (351)
T ss_pred cCCCCEEEEeCCChHH--HHHHHHHcCCeEEEe
Confidence 3444444444444432 233444455554444
No 314
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.75 E-value=2.8e+02 Score=27.35 Aligned_cols=77 Identities=8% Similarity=-0.006 Sum_probs=52.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCC-CEEEEECCCC--ccHHHHHHHHHHhCCeEecCCCCC---CHHHHHHHHHhcCCe
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKK-DVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVY---TVSELSKQVKDSNPK 98 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g-~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~---~~~~i~~~l~~~~~~ 98 (424)
+|++.+...+..+. ...++.++ |++...+|.. ..++..+++.+..|+..+.+.+.. .+.....++++.+++
T Consensus 172 ~s~~~~~~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~ 248 (545)
T PRK07768 172 ITHGNLYANAEAMF---VAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGT 248 (545)
T ss_pred EcHHHHHHHHHHHH---HhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCE
Confidence 68888866554433 33467776 7777777654 344445667788899888776532 456677889999999
Q ss_pred EEEEcc
Q 014435 99 LVITVP 104 (424)
Q Consensus 99 ~ii~~~ 104 (424)
++.+..
T Consensus 249 ~~~~~~ 254 (545)
T PRK07768 249 MTAAPN 254 (545)
T ss_pred EEECch
Confidence 865543
No 315
>PRK06382 threonine dehydratase; Provisional
Probab=27.73 E-value=3.1e+02 Score=26.03 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=39.4
Q ss_pred CCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 56 APNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 56 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
...+=.-..+.++|.+.|..+..+=|...+......++..+++++++...+
T Consensus 79 aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~ 129 (406)
T PRK06382 79 ASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDY 129 (406)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCH
Confidence 344555566778889999888877777676677788999999999998753
No 316
>PRK06178 acyl-CoA synthetase; Validated
Probab=27.65 E-value=4.7e+02 Score=25.93 Aligned_cols=86 Identities=14% Similarity=0.127 Sum_probs=60.4
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..+....... -.+.+++...++-...+ ...+++++..|+..+..+ ......+...+++.++..++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii 135 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF--HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLL 135 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH--HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEE
Confidence 468888877766665544322 22347777766665533 346778888898888664 47889999999999999999
Q ss_pred echHHHHHHH
Q 014435 259 VVPPIILALA 268 (424)
Q Consensus 259 ~~p~~~~~l~ 268 (424)
..+.....+.
T Consensus 136 ~~~~~~~~l~ 145 (567)
T PRK06178 136 ALDQLAPVVE 145 (567)
T ss_pred EccchHHHHH
Confidence 9887765543
No 317
>PRK09088 acyl-CoA synthetase; Validated
Probab=27.54 E-value=5.6e+02 Score=24.65 Aligned_cols=79 Identities=6% Similarity=-0.104 Sum_probs=55.4
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..+....... -..++++...++-...+ ...+++++..|+..+..+ ......+...+++.+++.++
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii 99 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL--VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLL 99 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEE
Confidence 468888877766665544422 22337777777665543 345788888898888775 46889999999999999987
Q ss_pred ech
Q 014435 259 VVP 261 (424)
Q Consensus 259 ~~p 261 (424)
...
T Consensus 100 ~~~ 102 (488)
T PRK09088 100 GDD 102 (488)
T ss_pred Ecc
Confidence 755
No 318
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=27.22 E-value=4.6e+02 Score=25.90 Aligned_cols=83 Identities=14% Similarity=0.134 Sum_probs=59.0
Q ss_pred hhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..+........ ...+++...++-...+ ...+++++..|+..+..++ .....+...+++.+++.++
T Consensus 48 ~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~--~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 48 AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY--PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 5788888877777666544322 2347777766654433 2356888999999987754 6789999999999999998
Q ss_pred echHHHH
Q 014435 259 VVPPIIL 265 (424)
Q Consensus 259 ~~p~~~~ 265 (424)
.......
T Consensus 126 ~~~~~~~ 132 (557)
T PRK07059 126 VLENFAT 132 (557)
T ss_pred EchhhHH
Confidence 8765543
No 319
>PRK10083 putative oxidoreductase; Provisional
Probab=27.17 E-value=3e+02 Score=24.95 Aligned_cols=82 Identities=18% Similarity=0.138 Sum_probs=45.7
Q ss_pred CCCCCCCCcHHHHHHHHHHH--HHH-HHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe-EecCCCCCCHHHHHHHHH
Q 014435 18 PLVLPSDPSFSMFKSIVIKV--SHS-FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI-ASTANPVYTVSELSKQVK 93 (424)
Q Consensus 18 ~~~~~~~~Ty~el~~~~~~~--a~~-L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~i~~~l~ 93 (424)
....++.+++.+-. ....+ +.. ....++++|++|+++.....-..++.+|-...|+. ++..+. ++ +-..+++
T Consensus 128 ~~~ip~~~~~~~a~-~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~--~~-~~~~~~~ 203 (339)
T PRK10083 128 AHRIPDAIADQYAV-MVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADR--ID-ERLALAK 203 (339)
T ss_pred eEECcCCCCHHHHh-hhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcC--CH-HHHHHHH
Confidence 33456666765422 11111 112 23447899999999986555555555555445874 443433 23 3345566
Q ss_pred hcCCeEEEEc
Q 014435 94 DSNPKLVITV 103 (424)
Q Consensus 94 ~~~~~~ii~~ 103 (424)
+.+++.++..
T Consensus 204 ~~Ga~~~i~~ 213 (339)
T PRK10083 204 ESGADWVINN 213 (339)
T ss_pred HhCCcEEecC
Confidence 7788777653
No 320
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=27.05 E-value=32 Score=15.55 Aligned_cols=9 Identities=56% Similarity=1.010 Sum_probs=6.3
Q ss_pred cccCccCCC
Q 014435 311 GYGMTETCA 319 (424)
Q Consensus 311 ~yG~tE~~~ 319 (424)
.||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888654
No 321
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=26.93 E-value=3.3e+02 Score=21.81 Aligned_cols=91 Identities=12% Similarity=0.073 Sum_probs=61.3
Q ss_pred HHHhhcCceEEecCCCCHHHHHHHHHHc-cceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCC-------HHHH
Q 014435 225 YDQLQKGNCVVSMGKFDIEMALRAIEKY-RVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLG-------KELM 296 (424)
Q Consensus 225 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~-~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~-------~~~~ 296 (424)
..-+.-|.++++-.......+.+.|.+. ++|++--.......|.+. +..+.++.||..-+ +...
T Consensus 14 ~~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~ 85 (161)
T PF00455_consen 14 ASLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIAL 85 (161)
T ss_pred HHhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHH
Confidence 3445667777777777778888888887 777777777777777654 36778888884432 4555
Q ss_pred HHHHHhCCCCeEEecccCccCCCceee
Q 014435 297 EDCQKNIPGATIFQGYGMTETCAPISL 323 (424)
Q Consensus 297 ~~~~~~~~~~~~~~~yG~tE~~~~~~~ 323 (424)
+.+++...+.-+...-|.++-.++...
T Consensus 86 ~~l~~~~~d~afi~~~gi~~~~G~~~~ 112 (161)
T PF00455_consen 86 EALRQFRFDKAFIGADGISEEGGLTTS 112 (161)
T ss_pred HHHHhhccceEEecccEecCCCccccc
Confidence 666665556777777787764444443
No 322
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=26.92 E-value=3.6e+02 Score=24.97 Aligned_cols=83 Identities=12% Similarity=0.041 Sum_probs=48.8
Q ss_pred CCCCCCCCCcHHHHHHHHHHHH----HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHHH
Q 014435 17 PPLVLPSDPSFSMFKSIVIKVS----HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSKQ 91 (424)
Q Consensus 17 ~~~~~~~~~Ty~el~~~~~~~a----~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~~ 91 (424)
.....+..+++.+..-....+. ..+...++++|++|+|......-.+++.+|- ..|+ .++.++.. . +...+
T Consensus 152 ~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak-~~G~~~vi~~~~~--~-~~~~~ 227 (369)
T cd08301 152 CVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGAR-IRGASRIIGVDLN--P-SKFEQ 227 (369)
T ss_pred cEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCC--H-HHHHH
Confidence 4445677788876543322221 1223357899999999976555555555554 5687 45555432 2 33445
Q ss_pred HHhcCCeEEEEc
Q 014435 92 VKDSNPKLVITV 103 (424)
Q Consensus 92 l~~~~~~~ii~~ 103 (424)
++..+++.++..
T Consensus 228 ~~~~Ga~~~i~~ 239 (369)
T cd08301 228 AKKFGVTEFVNP 239 (369)
T ss_pred HHHcCCceEEcc
Confidence 577888766643
No 323
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=26.90 E-value=7.1e+02 Score=25.61 Aligned_cols=150 Identities=15% Similarity=0.024 Sum_probs=84.6
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCC-cEEEEecchHHHHHHHHHHHHHh-hcCceEEecC
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQL-QKGNCVVSMG 238 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l-~~G~~~~~~~ 238 (424)
++.+++-...... |.-+-...|.+.+...+..+........-++ +.+-.+ ..+...+...-.++. +.+.++-+.+
T Consensus 89 ~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy--~~N~pEWiis~~a~~~~~~v~VplYd 165 (691)
T KOG1256|consen 89 GNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIY--AFNRPEWIISEMACYAYSLVNVPLYD 165 (691)
T ss_pred CCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEe--ccCChhhHHhHHHHHhcCCEEeeccc
Confidence 3444444333333 4445566677776665555544443333322 222211 111122223333444 4445555668
Q ss_pred CCCHHHHHHHHHHccceEEEec-hHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccC
Q 014435 239 KFDIEMALRAIEKYRVTVWWVV-PPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTET 317 (424)
Q Consensus 239 ~~~~~~~~~~i~~~~~t~~~~~-p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~ 317 (424)
...++.+...+++.++.+++.- +..+..|++..... .+++||.++.-.++.+ ++.++-.+. |++++...-.-|.
T Consensus 166 Tlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~--~~~~LK~iI~~~~~~~-~~~~~~~~~--gv~v~S~~e~~~l 240 (691)
T KOG1256|consen 166 TLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKEND--SLPSLKAIIQLDEPSD-ELKEKAENN--GVEVYSWDEFEEL 240 (691)
T ss_pred CCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccc--cCccceeEEEecCCch-hhhhhhhcC--CeEEEEHHHHHhh
Confidence 8899999999999999999988 88999888765422 2678999877766543 333443333 4666654444443
Q ss_pred C
Q 014435 318 C 318 (424)
Q Consensus 318 ~ 318 (424)
|
T Consensus 241 G 241 (691)
T KOG1256|consen 241 G 241 (691)
T ss_pred c
Confidence 3
No 324
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=26.61 E-value=5.1e+02 Score=24.87 Aligned_cols=56 Identities=14% Similarity=0.076 Sum_probs=30.9
Q ss_pred CCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCH----HHHHHHHHhcCCeEEEEcc
Q 014435 48 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTV----SELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 48 ~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~----~~i~~~l~~~~~~~ii~~~ 104 (424)
.|.+|+|..+....+-++-+-. .+|..++.+-..... +.++..++....+.++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~L~-elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRFVL-ENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHHHH-HCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 4678988887543333333333 678887544433332 2333445555666666654
No 325
>PRK08246 threonine dehydratase; Provisional
Probab=26.56 E-value=4.4e+02 Score=23.92 Aligned_cols=58 Identities=12% Similarity=0.042 Sum_probs=42.1
Q ss_pred CCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 48 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 48 ~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
+++.|... ..+=.-..+.++|.+.|..+..+=|...++.....++..++++++++...
T Consensus 67 ~~~~vv~a-SsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~ 124 (310)
T PRK08246 67 PAAGVVAA-SGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEY 124 (310)
T ss_pred cCCeEEEe-CCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCH
Confidence 45555443 34566677777888889877776666666667789999999999997643
No 326
>PLN02740 Alcohol dehydrogenase-like
Probab=26.50 E-value=2.1e+02 Score=26.81 Aligned_cols=82 Identities=12% Similarity=0.087 Sum_probs=48.2
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHH----HHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHHH
Q 014435 17 PPLVLPSDPSFSMFKSIVIKVSH----SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSKQ 91 (424)
Q Consensus 17 ~~~~~~~~~Ty~el~~~~~~~a~----~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~~ 91 (424)
.....++.+++.+.......+.. .....++++|++|+++..-.+-.+++.+|- ..|+ .++.++. +++ ....
T Consensus 163 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak-~~G~~~Vi~~~~--~~~-r~~~ 238 (381)
T PLN02740 163 CVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGAR-ARGASKIIGVDI--NPE-KFEK 238 (381)
T ss_pred HeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-HCCCCcEEEEcC--ChH-HHHH
Confidence 44456777888765443322221 123357999999999976555555555544 4677 3554543 233 3445
Q ss_pred HHhcCCeEEEE
Q 014435 92 VKDSNPKLVIT 102 (424)
Q Consensus 92 l~~~~~~~ii~ 102 (424)
++..+++.++.
T Consensus 239 a~~~Ga~~~i~ 249 (381)
T PLN02740 239 GKEMGITDFIN 249 (381)
T ss_pred HHHcCCcEEEe
Confidence 56778877664
No 327
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=26.38 E-value=3.6e+02 Score=25.27 Aligned_cols=55 Identities=13% Similarity=0.166 Sum_probs=33.5
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC--C----CCHHHHHHHHHhc------CCeEEEEc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--V----YTVSELSKQVKDS------NPKLVITV 103 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~----~~~~~i~~~l~~~------~~~~ii~~ 103 (424)
+++||.|.+..+ .+.....++...|+.++.++. . .+.+.+...++.. ++++|+++
T Consensus 99 ~~~gd~Vlv~~~---~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 CKKGDYVVLDGL---AHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred cCCCCEEEECCC---chHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 467887766422 233334456677888777654 1 4567777777643 56766654
No 328
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=26.28 E-value=3.4e+02 Score=26.92 Aligned_cols=87 Identities=10% Similarity=0.135 Sum_probs=54.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcC------CCCCCEEEEECCCCc---cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLG------ITKKDVVLIFAPNSI---HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDS 95 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~g------i~~g~~V~l~~~~~~---~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~ 95 (424)
+|++.+...+..+...+...+ +..++.+.+..-+-. .+....+.++..|...+..........+...+++.
T Consensus 227 ~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 306 (562)
T PRK12492 227 LTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKW 306 (562)
T ss_pred EechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHh
Confidence 688888777777777665433 455665544322221 22233445566777666554445677788889999
Q ss_pred CCeEEEEcccchHHHh
Q 014435 96 NPKLVITVPELWDKVK 111 (424)
Q Consensus 96 ~~~~ii~~~~~~~~~~ 111 (424)
++.+++..+..+..+.
T Consensus 307 ~~t~~~~~p~~~~~l~ 322 (562)
T PRK12492 307 RFSALLGLNTLFVALM 322 (562)
T ss_pred CCceeeCcHHHHHHHH
Confidence 9999988776655443
No 329
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=26.20 E-value=2.9e+02 Score=26.05 Aligned_cols=25 Identities=8% Similarity=0.066 Sum_probs=12.8
Q ss_pred HHHHHHHHHhCCCCeEEecccCccC
Q 014435 293 KELMEDCQKNIPGATIFQGYGMTET 317 (424)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~yG~tE~ 317 (424)
.+...+|.+.+.-..+-..+|.+|+
T Consensus 310 ~~~~~~~~~~l~l~~~~~s~G~~~s 334 (385)
T PRK08574 310 RDAVLKFLRSLKLIKPSPSLGGVES 334 (385)
T ss_pred HHHHHHHHHcCCcceEccCCCCCcc
Confidence 3444555555433344455666664
No 330
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=26.18 E-value=1.9e+02 Score=24.05 Aligned_cols=21 Identities=5% Similarity=-0.164 Sum_probs=19.1
Q ss_pred CCcHHHHHHHHHHHHHHHHHc
Q 014435 24 DPSFSMFKSIVIKVSHSFRHL 44 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~ 44 (424)
-+||.|+.+++.++|..+.+.
T Consensus 11 lis~~~I~~~i~~lA~~I~~~ 31 (189)
T PLN02238 11 LWTAEDISARVAELAAQIASD 31 (189)
T ss_pred EcCHHHHHHHHHHHHHHHHHH
Confidence 389999999999999999875
No 331
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=26.05 E-value=3.6e+02 Score=24.73 Aligned_cols=75 Identities=13% Similarity=0.185 Sum_probs=44.9
Q ss_pred CCcHHHHHHHHHHHHH---HHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 24 DPSFSMFKSIVIKVSH---SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~---~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.+++.+.......++. .+...++++|++|+++.....-..++.+|-. .|+.++.++. +++.+. .++..+++.+
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~-~G~~vi~~~~--~~~~~~-~~~~~Ga~~~ 214 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKA-MGAAVVAIDI--DPEKLE-MMKGFGADLT 214 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCeEEEEcC--CHHHHH-HHHHhCCceE
Confidence 5666654433332222 2344678999999999885556665555554 5876555533 444544 4567788776
Q ss_pred EE
Q 014435 101 IT 102 (424)
Q Consensus 101 i~ 102 (424)
+.
T Consensus 215 i~ 216 (349)
T TIGR03201 215 LN 216 (349)
T ss_pred ec
Confidence 64
No 332
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.84 E-value=4.7e+02 Score=23.62 Aligned_cols=75 Identities=12% Similarity=0.022 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCccHHHH---HHHHHHhCCeE--ecCCCCCCHHHHHHHHHhcCC----
Q 014435 28 SMFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPIC---FLGVIAIGAIA--STANPVYTVSELSKQVKDSNP---- 97 (424)
Q Consensus 28 ~el~~~~~~~a~~L~~~-gi~~g~~V~l~~~~~~~~~~~---~lA~~~~G~~~--v~l~~~~~~~~i~~~l~~~~~---- 97 (424)
+++.+...+-...|.+. |.+|+=.+.+..++.....+. .=+|-+.|..+ .-++.+.+.+++...+++.+-
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (293)
T PRK14185 11 AQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDV 90 (293)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 34555555555556655 777754444444444333333 33788889888 557777788888887777643
Q ss_pred eEEEE
Q 014435 98 KLVIT 102 (424)
Q Consensus 98 ~~ii~ 102 (424)
+-|++
T Consensus 91 ~GIlv 95 (293)
T PRK14185 91 DGFIV 95 (293)
T ss_pred CeEEE
Confidence 45554
No 333
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=25.28 E-value=2.2e+02 Score=23.11 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=40.9
Q ss_pred CCcHHHHHHHHHH--HHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC---eEecC---CCCCCHHHHHHHHHhc
Q 014435 24 DPSFSMFKSIVIK--VSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA---IASTA---NPVYTVSELSKQVKDS 95 (424)
Q Consensus 24 ~~Ty~el~~~~~~--~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~---~~v~l---~~~~~~~~i~~~l~~~ 95 (424)
.+.|.+-...... +.-.|++.+ ..+..|+++.|+..-.. -++..+|. .++.+ ++.......++.|+.-
T Consensus 34 El~~~~~~pg~~elLLlP~L~~Ls-~~~Rwlv~IaPP~~~~~---~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG 109 (168)
T TIGR00623 34 EVVYREDQPMMAQLLLLPLLQQLG-QQSRWQLWLTPQQKLSK---EWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTG 109 (168)
T ss_pred EEeecCCCchhHHHHHHHHHHHhc-ccCceEEEECCCCccCH---HHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhC
Confidence 3566554443433 444455544 34567888888765222 12222332 12233 3333445567888888
Q ss_pred CCeEEEEc
Q 014435 96 NPKLVITV 103 (424)
Q Consensus 96 ~~~~ii~~ 103 (424)
.+.+|++=
T Consensus 110 ~c~aVL~W 117 (168)
T TIGR00623 110 NYSVVIGW 117 (168)
T ss_pred CCcEEEec
Confidence 88888884
No 334
>KOG0391 consensus SNF2 family DNA-dependent ATPase [General function prediction only]
Probab=25.02 E-value=2.1e+02 Score=31.33 Aligned_cols=66 Identities=12% Similarity=0.051 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeE
Q 014435 33 IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 33 ~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 99 (424)
+-+.+|-.|++.. ..|.||.|+..-+-.+=++-.-+...|..++=||-..+.++.+.++++++++-
T Consensus 1261 KLQtLAiLLqQLk-~eghRvLIfTQMtkmLDVLeqFLnyHgylY~RLDg~t~vEqRQaLmerFNaD~ 1326 (1958)
T KOG0391|consen 1261 KLQTLAILLQQLK-SEGHRVLIFTQMTKMLDVLEQFLNYHGYLYVRLDGNTSVEQRQALMERFNADR 1326 (1958)
T ss_pred hHHHHHHHHHHHH-hcCceEEehhHHHHHHHHHHHHHhhcceEEEEecCCccHHHHHHHHHHhcCCC
Confidence 3466777777653 35889999988777766777777889999999999999999999999998753
No 335
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=24.96 E-value=2.5e+02 Score=19.75 Aligned_cols=68 Identities=22% Similarity=0.026 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEE-CCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 31 KSIVIKVSHSFRHLGITKKDVVLIF-APNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 31 ~~~~~~~a~~L~~~gi~~g~~V~l~-~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++.+.+++..+...+ .-+.|.+. ..+-++.+.+.--+.+.++..++.+...+ +.....|+..+++-++
T Consensus 9 yeTs~~va~~~~~~~--~~~~v~ia~g~~~~Dalsa~~~a~~~~~PIll~~~~l~-~~~~~~l~~~~~~~v~ 77 (92)
T PF04122_consen 9 YETSAKVAKKFYPDN--KSDKVYIASGDNFADALSASPLAAKNNAPILLVNNSLP-SSVKAFLKSLNIKKVY 77 (92)
T ss_pred HHHHHHHHHHhcccC--CCCEEEEEeCcchhhhhhhHHHHHhcCCeEEEECCCCC-HHHHHHHHHcCCCEEE
Confidence 455566666654432 33445554 33445544444444456888888884444 6677777776554443
No 336
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=24.91 E-value=3.7e+02 Score=24.62 Aligned_cols=78 Identities=4% Similarity=0.002 Sum_probs=39.9
Q ss_pred CcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~-gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
..|....+..+++...+.+. |..+.+ +.+...++.+. ..++.+.+..|-.++..++..........++..+.+++.+
T Consensus 25 ~~~~~~~~~~~~~~~~la~~~g~~~~~-~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v 103 (356)
T cd06451 25 HRSPEFLALMDEILEGLRYVFQTENGL-TFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVV 103 (356)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCC-EEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEe
Confidence 44555555555555555543 554333 44455554443 3344455556665555444333333445566667766665
Q ss_pred c
Q 014435 103 V 103 (424)
Q Consensus 103 ~ 103 (424)
.
T Consensus 104 ~ 104 (356)
T cd06451 104 E 104 (356)
T ss_pred e
Confidence 3
No 337
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=24.82 E-value=2.2e+02 Score=26.02 Aligned_cols=57 Identities=7% Similarity=-0.136 Sum_probs=39.3
Q ss_pred CCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 49 KDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 49 g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
++.|... ..+-.-..+.++|...|..+..+=|...+......++..+++++++....
T Consensus 70 ~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~ 126 (324)
T cd01563 70 VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNF 126 (324)
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcH
Confidence 3445444 23344455557888889887776665555666788899999999998643
No 338
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=24.77 E-value=3.7e+02 Score=24.61 Aligned_cols=80 Identities=11% Similarity=0.120 Sum_probs=46.0
Q ss_pred CCCCCCCCcHHHHHHHHHHH--H-HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe-EecCCCCCCHHHHHHHHH
Q 014435 18 PLVLPSDPSFSMFKSIVIKV--S-HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI-ASTANPVYTVSELSKQVK 93 (424)
Q Consensus 18 ~~~~~~~~Ty~el~~~~~~~--a-~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~i~~~l~ 93 (424)
....++.+++.+.. ...-+ | +.+.+.+..+|++|+|..--+.-.+++.+|-. .|+. ++..+. +++. ..+++
T Consensus 137 ~~~~P~~l~~~~aa-~~~~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~-~G~~~Vi~~~~--~~~~-~~~a~ 211 (343)
T PRK09880 137 CIPYPEKADEKVMA-FAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKT-LGAAEIVCADV--SPRS-LSLAR 211 (343)
T ss_pred eEECCCCCCHHHHH-hhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCcEEEEEeC--CHHH-HHHHH
Confidence 34466777875422 12222 2 22455677789999998765555555555554 4763 444432 3334 34566
Q ss_pred hcCCeEEEE
Q 014435 94 DSNPKLVIT 102 (424)
Q Consensus 94 ~~~~~~ii~ 102 (424)
+.+++.++.
T Consensus 212 ~lGa~~vi~ 220 (343)
T PRK09880 212 EMGADKLVN 220 (343)
T ss_pred HcCCcEEec
Confidence 788887664
No 339
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.77 E-value=2.8e+02 Score=24.84 Aligned_cols=59 Identities=10% Similarity=0.139 Sum_probs=35.7
Q ss_pred CEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHH---HHHHHHhcCCeEEEEcccchH
Q 014435 50 DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSE---LSKQVKDSNPKLVITVPELWD 108 (424)
Q Consensus 50 ~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---i~~~l~~~~~~~ii~~~~~~~ 108 (424)
.+..+...+.+.++.-.+++-..+..-.--...-++.+ +...+++.+.++||+++....
T Consensus 179 ~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~ 240 (286)
T cd01019 179 TKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHP 240 (286)
T ss_pred CCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCCh
Confidence 45566667788877777765443322111122345554 556667889999999876544
No 340
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=24.62 E-value=2.3e+02 Score=26.50 Aligned_cols=59 Identities=7% Similarity=-0.004 Sum_probs=44.5
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-----CC---HHHHHHHHHhcCCeEEEEcc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YT---VSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~---~~~i~~~l~~~~~~~ii~~~ 104 (424)
++++++|++.+.-+.|..++.+-+.+.|..++.+.-. .+ .+....+.+..+.++.+.+-
T Consensus 2 ~~~~~kVlValSGGVDSsvaa~LL~~~G~~V~~v~~~~~~~~~~~~d~~~a~~va~~LgIp~~vvd~ 68 (360)
T PRK14665 2 MEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAERLGIGHITYDA 68 (360)
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHHcCCeEEEEEEecCCCCCChHHHHHHHHHHHHhCCCEEEEec
Confidence 5678899999999999999999999988765543221 12 23457888889988888753
No 341
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=24.19 E-value=2.8e+02 Score=24.88 Aligned_cols=55 Identities=11% Similarity=0.042 Sum_probs=40.6
Q ss_pred CEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 50 DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 50 ~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
+.|... ..+-.-..+.++|.+.|..++.+-|...+.+....++..+++++.++.+
T Consensus 66 ~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~ 120 (304)
T cd01562 66 KGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGED 120 (304)
T ss_pred CcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 344444 4566677777888889987776666655666678899999999999865
No 342
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=24.08 E-value=3.5e+02 Score=25.42 Aligned_cols=38 Identities=8% Similarity=0.069 Sum_probs=18.5
Q ss_pred HHHHHHhCCeEecCCCCCCH--HHHHHHHHhcCCeEEEEc
Q 014435 66 FLGVIAIGAIASTANPVYTV--SELSKQVKDSNPKLVITV 103 (424)
Q Consensus 66 ~lA~~~~G~~~v~l~~~~~~--~~i~~~l~~~~~~~ii~~ 103 (424)
+.+++..|-.++..+|.++. ..+..+......++.+++
T Consensus 83 l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d 122 (382)
T TIGR02080 83 TTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVD 122 (382)
T ss_pred HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEEC
Confidence 33455556665555566543 222233344445555554
No 343
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=23.94 E-value=4.8e+02 Score=23.98 Aligned_cols=46 Identities=15% Similarity=0.204 Sum_probs=30.1
Q ss_pred eEecCCCCCCHHHHHHHHHhcCCeEEEEcccchHHHhcCCCCeEEEe
Q 014435 75 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLG 121 (424)
Q Consensus 75 ~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 121 (424)
++|.+.++ ..+.+..++++.++++||.|+.+.+.-..-....+++.
T Consensus 108 ~~V~V~~d-R~~~~~~~~~~~~~dviilDDGfQh~~L~rDl~Ivl~D 153 (326)
T PF02606_consen 108 VPVIVGPD-RVAAARAALKEFPADVIILDDGFQHRRLKRDLDIVLVD 153 (326)
T ss_pred CcEEEeCc-HHHHHHHHHHHCCCCEEEEcCCcccccccCCcEEEEEe
Confidence 44555443 56667788888889999999887776544444444443
No 344
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=23.89 E-value=4.5e+02 Score=22.31 Aligned_cols=81 Identities=5% Similarity=-0.025 Sum_probs=55.8
Q ss_pred CCcHHHHHHHHHHHHHHH-------HHcC-C-CCCCEEEEECCCC----ccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 24 DPSFSMFKSIVIKVSHSF-------RHLG-I-TKKDVVLIFAPNS----IHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L-------~~~g-i-~~g~~V~l~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
.+|-.|++-.++.+...| .+.. - +..-+|.+.++.+ .-..++...+-..|..++-+-.+.+.+++..
T Consensus 54 ei~vaqe~~as~~~~~~l~~l~~~l~~~~~~~~~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~ 133 (213)
T cd02069 54 KMFLPQVLKSARVMKAAVAYLEPYMEKEKGENSSKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILE 133 (213)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHH
Confidence 477777776665555433 2222 1 1233666666554 3334445555667999999999999999999
Q ss_pred HHHhcCCeEEEEcc
Q 014435 91 QVKDSNPKLVITVP 104 (424)
Q Consensus 91 ~l~~~~~~~ii~~~ 104 (424)
.+.+.+|++|..+.
T Consensus 134 ~~~~~~~~~V~lS~ 147 (213)
T cd02069 134 AAKEHKADIIGLSG 147 (213)
T ss_pred HHHHcCCCEEEEcc
Confidence 99999999998874
No 345
>PLN02479 acetate-CoA ligase
Probab=23.79 E-value=7.2e+02 Score=24.63 Aligned_cols=83 Identities=10% Similarity=0.001 Sum_probs=59.1
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..++...... ..+.+++....+..- .+...+++++..|+..+..++ +....+...+++.++..++
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIP--AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVM 122 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH--HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEE
Confidence 468888777777766555432 233477777776543 333467788888988887754 6889999999999999999
Q ss_pred echHHHH
Q 014435 259 VVPPIIL 265 (424)
Q Consensus 259 ~~p~~~~ 265 (424)
..+..+.
T Consensus 123 ~~~~~~~ 129 (567)
T PLN02479 123 VDQEFFT 129 (567)
T ss_pred Echhhhh
Confidence 8776543
No 346
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=23.75 E-value=3.6e+02 Score=25.00 Aligned_cols=84 Identities=8% Similarity=0.008 Sum_probs=48.7
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHH--H-HH-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKVS--H-SF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~a--~-~L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+........+ . .+ ...++++|++|.|+.....-.+++.+|- ..|+ .++.++. +.+. ..
T Consensus 148 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~-~~G~~~Vi~~~~--~~~~-~~ 223 (365)
T cd08277 148 NYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAK-IAGASRIIGVDI--NEDK-FE 223 (365)
T ss_pred hheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEeC--CHHH-HH
Confidence 34455677888877654332222 1 12 3357899999999965445555555544 4577 4555544 2333 34
Q ss_pred HHHhcCCeEEEEc
Q 014435 91 QVKDSNPKLVITV 103 (424)
Q Consensus 91 ~l~~~~~~~ii~~ 103 (424)
.++..+++.++..
T Consensus 224 ~~~~~ga~~~i~~ 236 (365)
T cd08277 224 KAKEFGATDFINP 236 (365)
T ss_pred HHHHcCCCcEecc
Confidence 4467777766643
No 347
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=23.71 E-value=6e+02 Score=26.19 Aligned_cols=89 Identities=6% Similarity=-0.066 Sum_probs=63.4
Q ss_pred hhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-CCCCHHHHHHHHHHccceE
Q 014435 179 GVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 179 ~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~ 256 (424)
...+|.+.+...+..+....... -.+++++...++-.. .+....++++..|+..+.. +.+.++.+...+++.++..
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 35678888888877776655432 234478877777644 3344677888888877755 4578899999999999999
Q ss_pred EEechHHHHHHHh
Q 014435 257 WWVVPPIILALAK 269 (424)
Q Consensus 257 ~~~~p~~~~~l~~ 269 (424)
+++....+..+.+
T Consensus 197 lv~~~~~~~~l~~ 209 (700)
T PTZ00216 197 IVCNGKNVPNLLR 209 (700)
T ss_pred EEECHHHHHHHHH
Confidence 9988776655543
No 348
>PTZ00297 pantothenate kinase; Provisional
Probab=23.69 E-value=2.9e+02 Score=31.39 Aligned_cols=81 Identities=16% Similarity=0.272 Sum_probs=58.5
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+|.+.+...+..++......+..++|+...++|=. .+ .++.++++..|+.... .+++.+...+++.+|.+++
T Consensus 620 mLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~e-r~~~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~ 694 (1452)
T PTZ00297 620 RVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFN-RVFVLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILV 694 (1452)
T ss_pred EEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHH-HHHHHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEE
Confidence 389999998888876542212356788888888853 33 3566777889988763 3567888999999999999
Q ss_pred EcccchHH
Q 014435 102 TVPELWDK 109 (424)
Q Consensus 102 ~~~~~~~~ 109 (424)
.-+..+.+
T Consensus 695 ~VPrv~ek 702 (1452)
T PTZ00297 695 AAPSLFST 702 (1452)
T ss_pred ecHHHHHH
Confidence 87655443
No 349
>PLN02384 ribose-5-phosphate isomerase
Probab=23.63 E-value=74 Score=27.99 Aligned_cols=36 Identities=8% Similarity=0.129 Sum_probs=26.9
Q ss_pred EEEecCCce--eeEeeeeeeChhhHHHHHhcCCCcccc
Q 014435 385 SYFRSNDHN--DFFCKLFQVAPAELEGLLVSHPEILDA 420 (424)
Q Consensus 385 g~~~~~g~~--di~~~G~~v~~~~iE~~l~~~p~V~~a 420 (424)
-++.++|.+ |+......-+|.+++..|.+.|+|.|.
T Consensus 204 p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~ipGVVE~ 241 (264)
T PLN02384 204 PFVTDNGNYIVDLYFKRDIGDLKVASDAILRLAGVVEH 241 (264)
T ss_pred cEECCCCCEEEEecCCCCCCCHHHHHHHHhCCCcEecc
Confidence 356777765 755432345899999999999999876
No 350
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]
Probab=23.62 E-value=6.9e+02 Score=26.63 Aligned_cols=81 Identities=15% Similarity=0.036 Sum_probs=50.9
Q ss_pred cEEEEecchHHHHHHHHH----HHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEechHHHHH-HHhccccccCCCCC
Q 014435 206 HVVLCVLPMFHVFGLSVI----LYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILA-LAKNSLVRKFDISS 280 (424)
Q Consensus 206 ~~~~~~~p~~~~~g~~~~----~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~-l~~~~~~~~~~~~~ 280 (424)
.+.+...|+.-...-... +..-+-.+..+...+.-.+..-.+.+.+.++.++++.|.|++. +++........++.
T Consensus 116 a~AL~lYPtnALa~DQ~~rl~~~~~~~~~~v~~~~y~Gdt~~~~r~~~~~~pp~IllTNpdMLh~~llr~~~~~~~~~~~ 195 (851)
T COG1205 116 ARALLLYPTNALANDQAERLRELISDLPGKVTFGRYTGDTPPEERRAIIRNPPDILLTNPDMLHYLLLRNHDAWLWLLRN 195 (851)
T ss_pred ccEEEEechhhhHhhHHHHHHHHHHhCCCcceeeeecCCCChHHHHHHHhCCCCEEEeCHHHHHHHhccCcchHHHHHhc
Confidence 566777777554433222 2222222445555555455666668999999999999999999 44443333344667
Q ss_pred eeEEEe
Q 014435 281 LKLVGS 286 (424)
Q Consensus 281 lr~~~~ 286 (424)
||++++
T Consensus 196 Lk~lVv 201 (851)
T COG1205 196 LKYLVV 201 (851)
T ss_pred CcEEEE
Confidence 888876
No 351
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.55 E-value=4.4e+02 Score=26.07 Aligned_cols=82 Identities=15% Similarity=0.079 Sum_probs=57.6
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..+....... -...+++...++-...+ ...+++++..|+..+..+ .+....+...+++.+++.++
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii 126 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVIL 126 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEE
Confidence 367777777766665554322 22347777777765543 346788899998888765 46789999999999999998
Q ss_pred echHHH
Q 014435 259 VVPPII 264 (424)
Q Consensus 259 ~~p~~~ 264 (424)
..+...
T Consensus 127 ~~~~~~ 132 (563)
T PRK06710 127 CLDLVF 132 (563)
T ss_pred Eeccch
Confidence 876543
No 352
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=23.47 E-value=6e+02 Score=24.60 Aligned_cols=69 Identities=14% Similarity=0.154 Sum_probs=47.0
Q ss_pred CCCcHHHHHHHHHHH--------------H-HHHHHcCCCCCCEEEEECCCCccHHHHHHH-HHHhCCeEecC--C----
Q 014435 23 SDPSFSMFKSIVIKV--------------S-HSFRHLGITKKDVVLIFAPNSIHFPICFLG-VIAIGAIASTA--N---- 80 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~--------------a-~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA-~~~~G~~~v~l--~---- 80 (424)
.+-||.+|.+.+..+ | +.+...++++||.| + +..++....+ +...|++++=+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV----p-sn~~f~Tt~ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV----P-GNMYFTTTRYHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE----C-CceeHHHHHHHHHhCCeEEEeeecccccc
Confidence 345999999987655 2 22445689999976 3 3566666666 67788877655 2
Q ss_pred --------CCCCHHHHHHHHHhcC
Q 014435 81 --------PVYTVSELSKQVKDSN 96 (424)
Q Consensus 81 --------~~~~~~~i~~~l~~~~ 96 (424)
-..+.+.++..++...
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 1347888888887543
No 353
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.46 E-value=2.7e+02 Score=24.90 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHH---HHHHHHhcCCeEEEEc
Q 014435 29 MFKSIVIKVSHSFRHL--GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSE---LSKQVKDSNPKLVITV 103 (424)
Q Consensus 29 el~~~~~~~a~~L~~~--gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---i~~~l~~~~~~~ii~~ 103 (424)
++.++.+.+-..+++. .++...+..+...+.+.++.-.+++-..+..-.--...-++.+ +...+++.++++||++
T Consensus 154 ~~~~~L~~l~~~~~~~l~~~~~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e 233 (287)
T cd01137 154 AYKAKLKALDEWAKAKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVE 233 (287)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCEEEEecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 3333344444444332 3333345677777788877777765554432111122334544 5566778899999998
Q ss_pred ccchHH
Q 014435 104 PELWDK 109 (424)
Q Consensus 104 ~~~~~~ 109 (424)
+....+
T Consensus 234 ~~~~~~ 239 (287)
T cd01137 234 STVNDR 239 (287)
T ss_pred CCCChH
Confidence 765443
No 354
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=23.20 E-value=3.2e+02 Score=25.19 Aligned_cols=63 Identities=14% Similarity=0.119 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCccHHHHHH-HHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 35 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL-GVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 35 ~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~l-A~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+.+|.++ |+.+++.|. +...+-+.+..++ ++..-|-.++..+|.+. ......+..+.+++.+.
T Consensus 70 ~~ia~~~---~~~~~~~I~-~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~--~~~~~~~~~g~~~~~i~ 133 (356)
T PRK04870 70 AALRAAM---GVPAGADVL-LGNGSDELIQLLALACAKPGATVLAPEPGFV--MYRMSAKLAGLEFVGVP 133 (356)
T ss_pred HHHHHHh---CcCCCCcEE-EcCCHHHHHHHHHHHhcCCCCEEEECCCCHH--HHHHHHHHcCCEEEEec
Confidence 3344444 444444343 2333333333333 33345655555566544 34556667777776664
No 355
>PRK13382 acyl-CoA synthetase; Provisional
Probab=23.03 E-value=4.9e+02 Score=25.64 Aligned_cols=84 Identities=11% Similarity=0.058 Sum_probs=57.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|+..+..... ..+...++.+++++....|-...+ +...++.+..|+.+++. ...+++++...+++.++.++...
T Consensus 216 ~s~~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~vt~~~~~ 291 (537)
T PRK13382 216 RSGPGGIGTLK---AILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTR-RRFDPEATLDLIDRHRATGLAVV 291 (537)
T ss_pred eccchHHHHHH---HHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEEC-CCcCHHHHHHHHHHhCCEEEEeh
Confidence 45544443333 334445677888887766654332 23456777788887764 56788999999999999999998
Q ss_pred ccchHHHhc
Q 014435 104 PELWDKVKD 112 (424)
Q Consensus 104 ~~~~~~~~~ 112 (424)
+..+..+..
T Consensus 292 P~~~~~l~~ 300 (537)
T PRK13382 292 PVMFDRIMD 300 (537)
T ss_pred HHHHHHHHc
Confidence 887766543
No 356
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=23.01 E-value=3e+02 Score=25.53 Aligned_cols=85 Identities=8% Similarity=0.046 Sum_probs=49.0
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHH----HHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKVSHS----FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELS 89 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~a~~----L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~ 89 (424)
.......++.+++.+.......+... +....+++|++|+|+.....-.+++.+|- ..|+ .++.++. +.+.+
T Consensus 149 ~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak-~~G~~~vi~~~~--~~~~~- 224 (368)
T cd08300 149 EISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAK-AAGASRIIGIDI--NPDKF- 224 (368)
T ss_pred hhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEeC--CHHHH-
Confidence 34455567788887654433222211 23357899999999975445555555554 4687 4554433 33333
Q ss_pred HHHHhcCCeEEEEc
Q 014435 90 KQVKDSNPKLVITV 103 (424)
Q Consensus 90 ~~l~~~~~~~ii~~ 103 (424)
..++..+++.++..
T Consensus 225 ~~~~~lGa~~~i~~ 238 (368)
T cd08300 225 ELAKKFGATDCVNP 238 (368)
T ss_pred HHHHHcCCCEEEcc
Confidence 45567888776643
No 357
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=22.94 E-value=2.4e+02 Score=25.26 Aligned_cols=82 Identities=16% Similarity=0.195 Sum_probs=49.0
Q ss_pred CCCeeEEEecCCCCC--HHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCCcEEEEeeCCCCcc
Q 014435 278 ISSLKLVGSGAAPLG--KELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKP 355 (424)
Q Consensus 278 ~~~lr~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~ 355 (424)
+.+|-.-++|++.-+ ..+.+++|+.||+ ..-+.|-++++-+......+. ...+.+-..-.|...+.++ ++|..
T Consensus 68 lr~lgL~lSg~d~e~~~~~lv~~~R~~fps-~ae~~~v~sDa~~sl~a~t~g---~~~GiVLiaGTgs~crl~~-~DGs~ 142 (336)
T KOG1794|consen 68 LRSLGLGLSGTDQEDKNRKLVTEFRDKFPS-VAENFYVTSDADGSLAAATPG---GEGGIVLIAGTGSNCRLVN-PDGSE 142 (336)
T ss_pred cceeeeecccCCchhHHHHHHHHHHHhccc-hhheeeeehhHHHHHhhcCCC---CCCcEEEEecCCceeEEEC-CCCCc
Confidence 455555566666544 4888999999974 334578888876555444432 1223333344556677777 46666
Q ss_pred CCCCCceeE
Q 014435 356 LPPNQLGEI 364 (424)
Q Consensus 356 ~~~g~~Gel 364 (424)
...|..|-+
T Consensus 143 ~~~ggwg~~ 151 (336)
T KOG1794|consen 143 KGAGGWGHM 151 (336)
T ss_pred cCCCCCCCc
Confidence 655555544
No 358
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=22.90 E-value=2.9e+02 Score=20.06 Aligned_cols=48 Identities=10% Similarity=0.050 Sum_probs=34.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecC
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA 79 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l 79 (424)
+.+.++.+. +...+..++..|.++|.++.....+...+.+.|..-+-.
T Consensus 41 ip~~~l~~~-------l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~G~~~v~~ 88 (101)
T TIGR02981 41 IPLKEIKEH-------IATAVPDKNDTVKLYCNAGRQSGMAKDILLDMGYTHAEN 88 (101)
T ss_pred CCHHHHHHH-------HHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHcCCCeEEe
Confidence 667666542 333334556789999999999988888888999765543
No 359
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=22.83 E-value=5.7e+02 Score=23.71 Aligned_cols=84 Identities=8% Similarity=0.001 Sum_probs=49.4
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHH---H-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKVSHS---F-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELS 89 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~a~~---L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~ 89 (424)
.......|+.+++.+........+.. + ....+++|++|+|+..-..-.+++.+| -..|+ .++.++. +++. .
T Consensus 148 ~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~A-k~~G~~~Vi~~~~--~~~~-~ 223 (368)
T TIGR02818 148 EISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGA-RMAKASRIIAIDI--NPAK-F 223 (368)
T ss_pred hhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcC--CHHH-H
Confidence 34455678888988755443222211 2 234789999999997544544544444 45677 4555533 3333 3
Q ss_pred HHHHhcCCeEEEE
Q 014435 90 KQVKDSNPKLVIT 102 (424)
Q Consensus 90 ~~l~~~~~~~ii~ 102 (424)
..+++.+++.++.
T Consensus 224 ~~a~~~Ga~~~i~ 236 (368)
T TIGR02818 224 ELAKKLGATDCVN 236 (368)
T ss_pred HHHHHhCCCeEEc
Confidence 4456778877664
No 360
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=22.59 E-value=2.1e+02 Score=21.30 Aligned_cols=26 Identities=8% Similarity=0.116 Sum_probs=22.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCC
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKD 50 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~ 50 (424)
++|.++.+.++++|..|.+.+.+...
T Consensus 5 ~~~~~~~~~~~~la~~i~~~~~~~~~ 30 (125)
T PF00156_consen 5 LSPEQIEALAERLAEQIKESGFDFDV 30 (125)
T ss_dssp EBHHHHHHHHHHHHHHHHHHTTTSSE
T ss_pred EcHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 58999999999999999998765543
No 361
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=22.54 E-value=3.7e+02 Score=24.91 Aligned_cols=84 Identities=6% Similarity=0.027 Sum_probs=48.7
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHH--H-HHHHc-CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKVS--H-SFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~a--~-~L~~~-gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
......++.+++.+..-...... . .+.+. .+++|++|++...-.+-.+++.+|- ..|+.++.+... .++...+
T Consensus 147 ~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak-~~Ga~vi~~~~~--~~~~~~~ 223 (360)
T PLN02586 147 HFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGK-AFGLKVTVISSS--SNKEDEA 223 (360)
T ss_pred HHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeCC--cchhhhH
Confidence 34455777888877543332211 1 23333 4678999999776556666555554 457765544332 2333455
Q ss_pred HHhcCCeEEEE
Q 014435 92 VKDSNPKLVIT 102 (424)
Q Consensus 92 l~~~~~~~ii~ 102 (424)
+++.+++.++.
T Consensus 224 ~~~~Ga~~vi~ 234 (360)
T PLN02586 224 INRLGADSFLV 234 (360)
T ss_pred HHhCCCcEEEc
Confidence 66778877764
No 362
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=22.37 E-value=2.3e+02 Score=25.22 Aligned_cols=49 Identities=12% Similarity=0.245 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCe-EecCCC
Q 014435 33 IVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAI-ASTANP 81 (424)
Q Consensus 33 ~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~-~v~l~~ 81 (424)
....+...|.+.|+.+++.|.+++..+..+ ..+.+.+-..|.. +..++-
T Consensus 71 ~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~G 121 (281)
T PRK11493 71 RPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAG 121 (281)
T ss_pred CHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCC
Confidence 356788889999999999999999876543 3445667777855 334443
No 363
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=22.31 E-value=5.3e+02 Score=25.36 Aligned_cols=83 Identities=12% Similarity=-0.044 Sum_probs=57.1
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-CCCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|...+...+..+....... -...+++...++-...+ ...+++++..|+..+..+ .+..+.+...++..++..++
T Consensus 39 ~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 39 RTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH--LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH--HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 468888877777666555432 22347777666654433 235678888899888775 46789999999999999988
Q ss_pred echHHHH
Q 014435 259 VVPPIIL 265 (424)
Q Consensus 259 ~~p~~~~ 265 (424)
.......
T Consensus 117 ~~~~~~~ 123 (542)
T PRK06018 117 TDLTFVP 123 (542)
T ss_pred EccccHH
Confidence 7664433
No 364
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=22.11 E-value=2.3e+02 Score=25.93 Aligned_cols=48 Identities=17% Similarity=0.164 Sum_probs=35.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCe-EecCCCC
Q 014435 35 IKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAI-ASTANPV 82 (424)
Q Consensus 35 ~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~-~v~l~~~ 82 (424)
..++..|.+.|+.++++|.+++.++..+ ..+++.+...|.. +..++-.
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG 138 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGG 138 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCC
Confidence 5678889999999999999998776544 3445677778874 4455543
No 365
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=22.02 E-value=91 Score=26.60 Aligned_cols=36 Identities=11% Similarity=-0.009 Sum_probs=25.0
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 65 CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 65 ~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
..=++.++|+.+++|++..+.+++..+++.+ +-+|-
T Consensus 29 Yv~~i~~aG~~pv~ip~~~~~~~~~~~l~~i--dGlll 64 (217)
T PF07722_consen 29 YVKAIEAAGGRPVPIPYDADDEELDELLDRI--DGLLL 64 (217)
T ss_dssp HHHHHHHTT-EEEEE-SS--HHHHHHHHHCS--SEEEE
T ss_pred HHHHHHHcCCEEEEEccCCCHHHHHHHHhhc--CEEEE
Confidence 3457788999999999999999999999865 44443
No 366
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=21.73 E-value=1.9e+02 Score=22.62 Aligned_cols=33 Identities=12% Similarity=-0.096 Sum_probs=25.4
Q ss_pred CCCCccHHHHHHHHHHhCCeEecCCCCCCHHHH
Q 014435 56 APNSIHFPICFLGVIAIGAIASTANPVYTVSEL 88 (424)
Q Consensus 56 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i 88 (424)
-.+.-......--+.+.|..++|+||.+..+++
T Consensus 26 ~~P~r~sy~V~kyL~~~GY~ViPVNP~~~~~ei 58 (140)
T COG1832 26 DKPDRPSYRVAKYLQQKGYRVIPVNPKLAGEEI 58 (140)
T ss_pred CCCCccHHHHHHHHHHCCCEEEeeCcccchHHh
Confidence 334466777777889999999999998776554
No 367
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=21.70 E-value=4.2e+02 Score=25.08 Aligned_cols=79 Identities=13% Similarity=0.099 Sum_probs=40.2
Q ss_pred CcHHHHHHHHH-HHHHHHHHcC----CCCCCEEEEECCCCcc--HHHHHHHHHHh------CCeEecCCCCC----CHHH
Q 014435 25 PSFSMFKSIVI-KVSHSFRHLG----ITKKDVVLIFAPNSIH--FPICFLGVIAI------GAIASTANPVY----TVSE 87 (424)
Q Consensus 25 ~Ty~el~~~~~-~~a~~L~~~g----i~~g~~V~l~~~~~~~--~~~~~lA~~~~------G~~~v~l~~~~----~~~~ 87 (424)
.++.++.+.+. .++..+...+ ...+..|+++.|++.- ..++-+|.... |..+..+..+. ..+.
T Consensus 145 ~~~~~v~~~l~~~l~~~i~~~~~~~~~~~~~vi~lvGptGvGKTTT~aKLA~~~~~~~~~~g~~V~lit~Dt~R~aa~eQ 224 (388)
T PRK12723 145 DDYDKVRDSVIIYIAKTIKCSGSIIDNLKKRVFILVGPTGVGKTTTIAKLAAIYGINSDDKSLNIKIITIDNYRIGAKKQ 224 (388)
T ss_pred CCHHHHHHHHHHHHHHHhhccCccccCCCCeEEEEECCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccCccHHHHHH
Confidence 35566665543 3444443221 1223478889998753 33344544322 44444443322 3345
Q ss_pred HHHHHHhcCCeEEEEc
Q 014435 88 LSKQVKDSNPKLVITV 103 (424)
Q Consensus 88 i~~~l~~~~~~~ii~~ 103 (424)
+..+.+..+..+....
T Consensus 225 L~~~a~~lgvpv~~~~ 240 (388)
T PRK12723 225 IQTYGDIMGIPVKAIE 240 (388)
T ss_pred HHHHhhcCCcceEeeC
Confidence 6677777777665544
No 368
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=21.61 E-value=5.3e+02 Score=23.80 Aligned_cols=61 Identities=15% Similarity=-0.007 Sum_probs=47.8
Q ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 45 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
-|.+|..+.+-.-.+=-=+...+.|...|..++..=|..=..+-..+|+.+++++|.++.+
T Consensus 99 ~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 99 LITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 3688876777655566667778888888998887777666667788999999999999864
No 369
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.53 E-value=3e+02 Score=24.47 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=38.4
Q ss_pred CCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHH---HHHHHHHhcCCeEEEEcccchH
Q 014435 48 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVS---ELSKQVKDSNPKLVITVPELWD 108 (424)
Q Consensus 48 ~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~i~~~l~~~~~~~ii~~~~~~~ 108 (424)
...++.+...+.+.++.-.+++-..+..-..-...-++. ++...++..++++|++++....
T Consensus 159 ~~~~~~~t~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~ 222 (276)
T cd01016 159 EQQRVLVTAHDAFGYFGRAYGFEVKGLQGISTDSEAGLRDINELVDLIVERKIKAIFVESSVNQ 222 (276)
T ss_pred hhcCeEEEecCcHHHHHHHcCCeEecCcCCCcccCCCHHHHHHHHHHHHHcCCCEEEEeCCCCH
Confidence 345677777778888877776665553211111122344 4567777889999999886554
No 370
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=21.47 E-value=2.9e+02 Score=28.49 Aligned_cols=58 Identities=10% Similarity=0.093 Sum_probs=41.4
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCC---------CH-----HHHHHHHHhcC-C----eEEEEcccc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY---------TV-----SELSKQVKDSN-P----KLVITVPEL 106 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~~-----~~i~~~l~~~~-~----~~ii~~~~~ 106 (424)
+++||.| |+-+|+--.+.. |+..+|+.++-+.|.. ++ +.++..+++.. + .++|+++.+
T Consensus 232 ~~~Gd~V-LvdRN~HKSv~~--aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY 308 (713)
T PRK15399 232 APAGSTL-LIDRNCHKSLAH--LLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY 308 (713)
T ss_pred cCCCCEE-EeecccHHHHHH--HHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC
Confidence 6789955 577888777655 9999999999988763 23 77887877652 2 356666543
No 371
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=21.41 E-value=3.7e+02 Score=25.64 Aligned_cols=61 Identities=21% Similarity=0.181 Sum_probs=42.3
Q ss_pred CCCCCCEEEEECCCCccHH----HHHH--HHHHhCCeE---ecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 45 GITKKDVVLIFAPNSIHFP----ICFL--GVIAIGAIA---STANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~~~----~~~l--A~~~~G~~~---v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
.++++|.|.+.++..+-.. .... .+.+.|+.+ .-.+-+.+.+++..+++..+|+.+|--..
T Consensus 315 ~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ipvHg 384 (422)
T TIGR00649 315 RIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIPVHG 384 (422)
T ss_pred EeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEecCC
Confidence 3568899999886554333 1222 366788865 34556778999999999999998885443
No 372
>PRK12582 acyl-CoA synthetase; Provisional
Probab=21.38 E-value=4.9e+02 Score=26.32 Aligned_cols=79 Identities=8% Similarity=-0.037 Sum_probs=55.6
Q ss_pred hhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CC-----HHHHHHHHHHcc
Q 014435 181 ILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FD-----IEMALRAIEKYR 253 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~-----~~~~~~~i~~~~ 253 (424)
.+|.+.+...+..+....... -.+.+++...++-.. .+...+++++..|+..+...+ ++ ...+...+++.+
T Consensus 80 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 80 KVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI--EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 578888888777766655322 233488888777543 333467888999999887754 33 378899999999
Q ss_pred ceEEEech
Q 014435 254 VTVWWVVP 261 (424)
Q Consensus 254 ~t~~~~~p 261 (424)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 98887654
No 373
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=21.31 E-value=3e+02 Score=22.25 Aligned_cols=20 Identities=5% Similarity=0.009 Sum_probs=18.5
Q ss_pred CcHHHHHHHHHHHHHHHHHc
Q 014435 25 PSFSMFKSIVIKVSHSFRHL 44 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~ 44 (424)
+||.|+.+.+.++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999874
No 374
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=21.23 E-value=5.3e+02 Score=22.13 Aligned_cols=81 Identities=12% Similarity=0.179 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHh--hcCceEEec-CCCCHHHHHHHHHHccceEEEechHHHHHH------HhccccccCCCCCeeEEE
Q 014435 215 FHVFGLSVILYDQL--QKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILAL------AKNSLVRKFDISSLKLVG 285 (424)
Q Consensus 215 ~~~~g~~~~~~~~l--~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l------~~~~~~~~~~~~~lr~~~ 285 (424)
-|..|-. +..++ ..|.-++=. ....++.+++..++++++.+.++-.+=..+ .+.....+ ++.--.+.
T Consensus 116 vHdIGk~--iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeG--iRd~v~v~ 191 (227)
T COG5012 116 VHDIGKN--IVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEG--IRDKVIVM 191 (227)
T ss_pred HHHHHHH--HHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcC--CccCeEEe
Confidence 4555553 22222 345555533 446789999999999999988776543222 22222222 22222466
Q ss_pred ecCCCCCHHHHHHH
Q 014435 286 SGAAPLGKELMEDC 299 (424)
Q Consensus 286 ~~g~~~~~~~~~~~ 299 (424)
.||+|++.+..+++
T Consensus 192 vGGApvtq~~a~~i 205 (227)
T COG5012 192 VGGAPVTQDWADKI 205 (227)
T ss_pred ecCccccHHHHHHh
Confidence 79999998776664
No 375
>PRK07503 methionine gamma-lyase; Provisional
Probab=21.23 E-value=4.3e+02 Score=25.03 Aligned_cols=24 Identities=8% Similarity=-0.079 Sum_probs=10.9
Q ss_pred HHHHHHHHhCCCCeEEecccCccC
Q 014435 294 ELMEDCQKNIPGATIFQGYGMTET 317 (424)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~yG~tE~ 317 (424)
+...+|.+.+.-...-..+|.+|+
T Consensus 323 ~~~~~~~~~l~l~~~~~slG~~~s 346 (403)
T PRK07503 323 AAGRRFMNALQLFARAVSLGDAES 346 (403)
T ss_pred HHHHHHHHhCCcceeecccCCCCc
Confidence 334455554432233334666664
No 376
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=21.16 E-value=6e+02 Score=22.74 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=45.4
Q ss_pred CCCCCCCcHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhc
Q 014435 19 LVLPSDPSFSMFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDS 95 (424)
Q Consensus 19 ~~~~~~~Ty~el~~~~~~~a---~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~ 95 (424)
...++.+++.+.......+. ..+...++++|++|.|+..++.--..+...+-..|+.++.+. . ...++..
T Consensus 130 ~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~----~---~~~~~~~ 202 (325)
T cd08264 130 FKIPDSISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVS----R---KDWLKEF 202 (325)
T ss_pred eeCCCCCCHHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEe----H---HHHHHHh
Confidence 34556677766544333322 123446789999999998865544455555556787765553 1 1334556
Q ss_pred CCeEEEEc
Q 014435 96 NPKLVITV 103 (424)
Q Consensus 96 ~~~~ii~~ 103 (424)
+++.++..
T Consensus 203 g~~~~~~~ 210 (325)
T cd08264 203 GADEVVDY 210 (325)
T ss_pred CCCeeecc
Confidence 66666543
No 377
>PF04915 DltD_N: DltD N-terminal region; InterPro: IPR006999 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the N-terminal region of DltD.; PDB: 3BMA_C.
Probab=21.10 E-value=62 Score=21.21 Aligned_cols=15 Identities=20% Similarity=0.242 Sum_probs=10.8
Q ss_pred CCCeEEecccCccCC
Q 014435 304 PGATIFQGYGMTETC 318 (424)
Q Consensus 304 ~~~~~~~~yG~tE~~ 318 (424)
.+.+.+..||++|..
T Consensus 26 ~~~~yvPfyGSSEl~ 40 (62)
T PF04915_consen 26 KDPKYVPFYGSSELS 40 (62)
T ss_dssp SSS-EEEEE-SSTTT
T ss_pred cCCCeeeecCcHHHh
Confidence 467999999999965
No 378
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=21.00 E-value=3.8e+02 Score=20.31 Aligned_cols=39 Identities=8% Similarity=0.055 Sum_probs=29.6
Q ss_pred cCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEecCCCC
Q 014435 44 LGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPV 82 (424)
Q Consensus 44 ~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~ 82 (424)
.|+.+++.|.++|. .+.....+.+.+...|..+..++-.
T Consensus 81 ~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~~v~~L~GG 120 (128)
T cd01520 81 ARLERDPKLLIYCARGGMRSQSLAWLLESLGIDVPLLEGG 120 (128)
T ss_pred hccCCCCeEEEEeCCCCccHHHHHHHHHHcCCceeEeCCc
Confidence 58999999999996 5677777777777789876555543
No 379
>PRK14057 epimerase; Provisional
Probab=20.97 E-value=5.8e+02 Score=22.46 Aligned_cols=63 Identities=10% Similarity=0.085 Sum_probs=44.8
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC----------eEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 37 VSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA----------IASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 37 ~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~----------~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+...|.+.| .|.|.++.+.+.+..-.+-.+-..|+ .-+.++|.-+.+.+..++.....-.+.+
T Consensus 90 ~i~~~~~aG---ad~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMt 162 (254)
T PRK14057 90 AAQACVKAG---AHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLA 162 (254)
T ss_pred HHHHHHHhC---CCEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEE
Confidence 333444544 46899999987666555556666675 6788999999999999998766544444
No 380
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=20.96 E-value=4.3e+02 Score=23.41 Aligned_cols=59 Identities=12% Similarity=0.036 Sum_probs=44.3
Q ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEe--cCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 45 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS--TANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v--~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
.-=+|-||+.++.-..+..+.+..+..+|+-+. .-||-.+.+++...|...+..+.-..
T Consensus 39 kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~~ 99 (268)
T PF05221_consen 39 KPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAWK 99 (268)
T ss_dssp -TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-T
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEeC
Confidence 334678999999999999999999999998665 56788899999999998888765543
No 381
>PRK06234 methionine gamma-lyase; Provisional
Probab=20.74 E-value=5.3e+02 Score=24.42 Aligned_cols=24 Identities=29% Similarity=0.167 Sum_probs=12.9
Q ss_pred HHHHHHHHhCCCCeEEecccCccC
Q 014435 294 ELMEDCQKNIPGATIFQGYGMTET 317 (424)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~yG~tE~ 317 (424)
+...+|.+.+.-..+-..+|.+|+
T Consensus 324 ~~~~~f~~~l~~~~~~~s~G~~~s 347 (400)
T PRK06234 324 EEGKVVMNNVKLATLAVSLGDAET 347 (400)
T ss_pred HHHHHHHHhCCcceEeccCCCCCc
Confidence 334556555533445555666664
No 382
>PRK06721 threonine synthase; Reviewed
Probab=20.64 E-value=3.3e+02 Score=25.29 Aligned_cols=50 Identities=6% Similarity=-0.085 Sum_probs=35.5
Q ss_pred CCCccHHHHHHHHHHhCCeEecCCCCC-CHHHHHHHHHhcCCeEEEEcccc
Q 014435 57 PNSIHFPICFLGVIAIGAIASTANPVY-TVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 57 ~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
..+=.-..+.++|.+.|..+..+=|.. .+......++..+++++++..+.
T Consensus 82 SsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~ 132 (352)
T PRK06721 82 STGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNF 132 (352)
T ss_pred CCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 344455677778888998777666653 34455567899999999998643
No 383
>PRK08813 threonine dehydratase; Provisional
Probab=20.60 E-value=6.7e+02 Score=23.33 Aligned_cols=54 Identities=15% Similarity=-0.049 Sum_probs=40.0
Q ss_pred EECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccch
Q 014435 54 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 107 (424)
Q Consensus 54 l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~ 107 (424)
+....+=.-..+.++|...|..+..+=|...++.....++.++++++.+..++.
T Consensus 85 V~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~~ 138 (349)
T PRK08813 85 ICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSYD 138 (349)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 455556667778888899998777655655555667778999999999976543
No 384
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=20.34 E-value=6.5e+02 Score=24.16 Aligned_cols=77 Identities=6% Similarity=0.034 Sum_probs=51.8
Q ss_pred cHHHHHHHHHHHHhhhhhcc--CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEEe
Q 014435 183 THKNFIAASLMISAHQELVG--ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWWV 259 (424)
Q Consensus 183 t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 259 (424)
..+.+...+...+....... ..++++...++-.. .+...+++++..|+.++..++ .....+...+++.+++++..
T Consensus 21 ~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~--e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 21 NSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPL--QFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCH--HHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 44566666655555544432 23467776666542 233467888889999998754 67899999999999998886
Q ss_pred ch
Q 014435 260 VP 261 (424)
Q Consensus 260 ~p 261 (424)
..
T Consensus 99 ~~ 100 (452)
T PRK07445 99 LD 100 (452)
T ss_pred cC
Confidence 43
No 385
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=20.18 E-value=5.6e+02 Score=23.92 Aligned_cols=81 Identities=14% Similarity=0.084 Sum_probs=46.5
Q ss_pred CCCCCCCcHHHHHHHHHHHHHH---HHH---cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 19 LVLPSDPSFSMFKSIVIKVSHS---FRH---LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 19 ~~~~~~~Ty~el~~~~~~~a~~---L~~---~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
...++.+++.+........+.. +.. .++++|++|.|....+.--..+...+...|+.++.+.. +.++ ...+
T Consensus 158 ~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~--s~~~-~~~~ 234 (393)
T cd08246 158 MPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVS--SEEK-AEYC 234 (393)
T ss_pred EECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeC--CHHH-HHHH
Confidence 3456667776654332222222 221 36889999999987554444444555666887665532 3444 3455
Q ss_pred HhcCCeEEEE
Q 014435 93 KDSNPKLVIT 102 (424)
Q Consensus 93 ~~~~~~~ii~ 102 (424)
++.+++.++-
T Consensus 235 ~~~G~~~~i~ 244 (393)
T cd08246 235 RALGAEGVIN 244 (393)
T ss_pred HHcCCCEEEc
Confidence 6688777664
No 386
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=20.05 E-value=1.8e+02 Score=27.67 Aligned_cols=59 Identities=22% Similarity=0.313 Sum_probs=39.3
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC---------CCH-----HHHHHHHHhcC-Ce----EEEEcccc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV---------YTV-----SELSKQVKDSN-PK----LVITVPEL 106 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~~~-----~~i~~~l~~~~-~~----~ii~~~~~ 106 (424)
+++||+| ++-.|+-..+.. |+...|+.++-++|. .++ +.+...+++.. ++ ++|+++.+
T Consensus 103 ~~~gd~V-Lv~RN~HkSv~~--alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY 179 (417)
T PF01276_consen 103 CRPGDKV-LVDRNCHKSVYN--ALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY 179 (417)
T ss_dssp TTTTCEE-EEETT--HHHHH--HHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T
T ss_pred cCCCCEE-EEcCCcHHHHHH--HHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC
Confidence 6799964 556777666655 999999999987773 223 78888888764 33 57777654
Q ss_pred h
Q 014435 107 W 107 (424)
Q Consensus 107 ~ 107 (424)
.
T Consensus 180 ~ 180 (417)
T PF01276_consen 180 Y 180 (417)
T ss_dssp T
T ss_pred C
Confidence 4
No 387
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=20.05 E-value=4.2e+02 Score=23.55 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=40.3
Q ss_pred CCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHH
Q 014435 7 GRDGIYRSLRPPLVLPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPIC 65 (424)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~ 65 (424)
.++.+|..++..+..+. +|=.++.+++.++..+|.+++++ +.++.-|+.-.++.
T Consensus 30 ~e~~iY~~D~a~~PYG~-ks~e~I~~~~~~i~~~l~~~~ik----~lVIACNTASa~al 83 (269)
T COG0796 30 DEDIIYVGDTARFPYGE-KSEEEIRERTLEIVDFLLERGIK----ALVIACNTASAVAL 83 (269)
T ss_pred CCcEEEEecCCCCCCCC-CCHHHHHHHHHHHHHHHHHcCCC----EEEEecchHHHHHH
Confidence 35677778887776554 88999999999999999998754 66666666544433
No 388
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=20.00 E-value=3.7e+02 Score=25.46 Aligned_cols=71 Identities=15% Similarity=0.258 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHc-C--CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 31 KSIVIKVSHSFRHL-G--ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 31 ~~~~~~~a~~L~~~-g--i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
...-+++|.++.+. | +.+.+-|.+-.....-+..++.+++.-|=.++..+|.++. ....++..+.+.+.+.
T Consensus 68 ~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~--y~~~~~~~gg~~v~v~ 141 (393)
T COG0436 68 PELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPS--YEAAVKLAGGKPVPVP 141 (393)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcC--HHHHHHhcCCEEEEEe
Confidence 33444555555543 3 4444446666555666666666666666555555565553 2234445555555554
Done!