Query 014435
Match_columns 424
No_of_seqs 179 out of 2120
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 11:30:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014435.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014435hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 1.4E-66 4.7E-71 508.6 36.2 400 14-424 36-466 (536)
2 3rix_A Luciferase, luciferin 4 100.0 2.1E-65 7.2E-70 501.8 36.6 393 21-424 47-471 (550)
3 2d1s_A Luciferase, luciferin 4 100.0 4.3E-65 1.5E-69 498.8 38.2 391 22-424 50-473 (548)
4 4fuq_A Malonyl COA synthetase; 100.0 5.9E-66 2E-70 500.0 29.4 382 22-424 26-431 (503)
5 3g7s_A Long-chain-fatty-acid-- 100.0 2.1E-64 7.2E-69 494.6 33.7 384 22-424 50-471 (549)
6 3etc_A AMP-binding protein; ad 100.0 4.7E-64 1.6E-68 493.8 35.2 387 22-424 84-507 (580)
7 3r44_A Fatty acyl COA syntheta 100.0 2.8E-64 9.5E-69 489.9 32.6 384 23-424 42-445 (517)
8 1mdb_A 2,3-dihydroxybenzoate-A 100.0 9.5E-64 3.2E-68 488.6 34.0 390 14-424 39-462 (539)
9 1pg4_A Acetyl-COA synthetase; 100.0 5.8E-63 2E-67 492.5 37.9 394 23-424 106-549 (652)
10 3o83_A Peptide arylation enzym 100.0 8.3E-64 2.8E-68 489.6 30.6 394 14-424 44-471 (544)
11 1v25_A Long-chain-fatty-acid-C 100.0 2.1E-63 7.3E-68 486.3 32.0 385 22-424 45-467 (541)
12 3c5e_A Acyl-coenzyme A synthet 100.0 8.2E-63 2.8E-67 484.3 35.4 382 23-424 72-488 (570)
13 1t5h_X 4-chlorobenzoyl COA lig 100.0 9E-63 3.1E-67 478.3 35.2 376 22-424 27-434 (504)
14 2v7b_A Benzoate-coenzyme A lig 100.0 8.9E-63 3.1E-67 481.4 34.4 396 14-424 37-461 (529)
15 3fce_A D-alanine--poly(phospho 100.0 4E-63 1.4E-67 481.9 29.9 386 14-424 15-431 (512)
16 1ry2_A Acetyl-coenzyme A synth 100.0 3.8E-62 1.3E-66 486.8 36.0 397 22-424 111-558 (663)
17 3tsy_A Fusion protein 4-coumar 100.0 1.8E-62 6.1E-67 511.0 33.9 407 14-424 75-513 (979)
18 3l8c_A D-alanine--poly(phospho 100.0 1.3E-62 4.3E-67 479.6 30.4 385 15-424 19-435 (521)
19 3ivr_A Putative long-chain-fat 100.0 3.5E-62 1.2E-66 474.9 31.8 385 14-424 20-432 (509)
20 4gr5_A Non-ribosomal peptide s 100.0 1.8E-62 6.1E-67 482.8 29.7 379 14-424 89-501 (570)
21 3e7w_A D-alanine--poly(phospho 100.0 4.5E-62 1.5E-66 474.2 32.0 384 14-424 15-430 (511)
22 4dg8_A PA1221; ANL superfamily 100.0 8.2E-62 2.8E-66 480.4 32.7 377 14-424 41-451 (620)
23 1amu_A GRSA, gramicidin synthe 100.0 1.8E-61 6.3E-66 474.0 33.3 378 14-424 53-462 (563)
24 3rg2_A Enterobactin synthase c 100.0 5.1E-61 1.7E-65 476.5 35.8 392 14-424 39-466 (617)
25 3gqw_A Fatty acid AMP ligase; 100.0 1.8E-60 6.1E-65 470.7 32.9 383 21-424 46-493 (576)
26 3ipl_A 2-succinylbenzoate--COA 100.0 1.1E-60 3.8E-65 463.7 29.9 393 14-424 15-430 (501)
27 3nyq_A Malonyl-COA ligase; A/B 100.0 8.8E-61 3E-65 463.7 25.0 371 16-424 39-438 (505)
28 3kxw_A Saframycin MX1 syntheta 100.0 2.4E-60 8.2E-65 470.8 25.0 384 22-424 38-493 (590)
29 3ite_A SIDN siderophore synthe 100.0 7.6E-59 2.6E-63 456.9 31.1 377 23-424 54-460 (562)
30 2vsq_A Surfactin synthetase su 100.0 4.4E-58 1.5E-62 489.3 33.7 383 14-424 478-893 (1304)
31 3t5a_A Long-chain-fatty-acid-- 100.0 6.3E-56 2.2E-60 428.5 26.3 352 23-393 57-475 (480)
32 3qov_A Phenylacetate-coenzyme 100.0 3.5E-41 1.2E-45 321.0 21.7 260 159-424 82-363 (436)
33 4gs5_A Acyl-COA synthetase (AM 100.0 6.8E-41 2.3E-45 309.3 13.9 239 161-423 36-284 (358)
34 2y27_A Phenylacetate-coenzyme 100.0 2.6E-39 8.9E-44 308.1 23.0 261 158-424 86-365 (437)
35 2y4o_A Phenylacetate-coenzyme 100.0 3.1E-39 1.1E-43 308.1 20.6 260 159-424 89-367 (443)
36 3hgu_A EHPF; phenazine, antibi 100.0 3E-32 1E-36 253.5 16.0 222 159-390 88-341 (369)
37 4eql_A 4-substituted benzoates 98.4 1.4E-06 4.9E-11 83.4 10.2 125 278-413 296-446 (581)
38 4b2g_A GH3-1 auxin conjugating 98.3 4.8E-06 1.6E-10 80.0 10.9 125 278-413 301-458 (609)
39 4epl_A Jasmonic acid-amido syn 98.0 1.6E-05 5.6E-10 75.9 9.5 126 278-413 301-453 (581)
40 2y27_A Phenylacetate-coenzyme 94.2 0.26 9E-06 45.9 10.4 86 25-111 110-197 (437)
41 2y4o_A Phenylacetate-coenzyme 94.0 0.28 9.7E-06 45.8 10.1 86 25-111 112-199 (443)
42 3qov_A Phenylacetate-coenzyme 93.8 0.27 9.3E-06 45.8 9.7 86 25-111 106-193 (436)
43 3hgu_A EHPF; phenazine, antibi 85.6 1.8 6E-05 39.1 7.1 86 25-112 111-221 (369)
44 3ipl_A 2-succinylbenzoate--COA 82.5 5.8 0.0002 37.4 9.5 84 25-112 183-267 (501)
45 2d1s_A Luciferase, luciferin 4 82.0 3.5 0.00012 39.5 7.8 86 25-112 212-299 (548)
46 1mdb_A 2,3-dihydroxybenzoate-A 80.7 8.1 0.00028 36.8 9.9 82 25-110 202-286 (539)
47 3o83_A Peptide arylation enzym 79.3 8 0.00027 36.9 9.3 82 25-110 211-295 (544)
48 3r44_A Fatty acyl COA syntheta 77.5 8.6 0.00029 36.4 8.9 83 25-112 190-274 (517)
49 3rix_A Luciferase, luciferin 4 75.4 5.9 0.0002 37.9 7.2 87 25-112 210-297 (550)
50 3t5a_A Long-chain-fatty-acid-- 74.9 15 0.00053 34.1 9.9 106 160-269 37-148 (480)
51 4eez_A Alcohol dehydrogenase 1 74.9 24 0.0008 31.2 10.6 87 14-103 126-215 (348)
52 3fce_A D-alanine--poly(phospho 73.1 6 0.00021 37.4 6.5 84 25-111 164-250 (512)
53 3e7w_A D-alanine--poly(phospho 72.8 9.9 0.00034 35.9 8.0 84 25-111 163-249 (511)
54 1v25_A Long-chain-fatty-acid-C 71.6 9.8 0.00033 36.3 7.6 86 25-111 196-282 (541)
55 3s2e_A Zinc-containing alcohol 70.8 26 0.0009 30.8 9.9 86 14-103 129-217 (340)
56 3rg2_A Enterobactin synthase c 69.9 25 0.00087 34.0 10.3 82 25-110 204-288 (617)
57 3c5e_A Acyl-coenzyme A synthet 69.9 15 0.00052 35.2 8.6 71 42-112 240-313 (570)
58 3g7s_A Long-chain-fatty-acid-- 69.1 56 0.0019 31.0 12.4 104 161-268 33-139 (549)
59 3qwb_A Probable quinone oxidor 68.5 29 0.001 30.5 9.6 94 6-103 99-200 (334)
60 3kxw_A Saframycin MX1 syntheta 68.2 9.9 0.00034 36.6 6.9 83 25-110 187-274 (590)
61 3ni2_A 4-coumarate:COA ligase; 67.7 47 0.0016 31.4 11.5 99 160-267 35-135 (536)
62 1t5h_X 4-chlorobenzoyl COA lig 67.7 11 0.00037 35.5 7.0 83 25-111 173-259 (504)
63 3ezx_A MMCP 1, monomethylamine 62.5 41 0.0014 27.4 8.6 91 206-299 93-195 (215)
64 3ivr_A Putative long-chain-fat 61.7 34 0.0012 32.1 9.2 82 25-111 180-263 (509)
65 4gs5_A Acyl-COA synthetase (AM 61.6 11 0.00037 33.8 5.4 82 24-111 56-138 (358)
66 3tbh_A O-acetyl serine sulfhyd 61.6 26 0.0009 30.9 7.8 65 41-105 62-127 (334)
67 3tqh_A Quinone oxidoreductase; 59.5 48 0.0016 28.8 9.2 84 15-103 116-203 (321)
68 3nyq_A Malonyl-COA ligase; A/B 58.8 36 0.0012 32.0 8.8 82 25-111 175-258 (505)
69 2v7b_A Benzoate-coenzyme A lig 58.6 32 0.0011 32.5 8.5 69 44-112 220-290 (529)
70 1ry2_A Acetyl-coenzyme A synth 58.4 79 0.0027 30.9 11.4 98 160-262 95-195 (663)
71 4gr5_A Non-ribosomal peptide s 58.1 20 0.00068 34.4 6.9 83 25-111 234-318 (570)
72 1h2b_A Alcohol dehydrogenase; 58.0 30 0.001 30.8 7.7 86 16-104 146-239 (359)
73 3jv7_A ADH-A; dehydrogenase, n 56.8 19 0.00066 31.8 6.2 86 15-104 134-224 (345)
74 1amu_A GRSA, gramicidin synthe 55.2 1E+02 0.0035 29.3 11.4 95 161-266 53-149 (563)
75 1zsy_A Mitochondrial 2-enoyl t 54.9 66 0.0023 28.5 9.5 87 16-103 131-223 (357)
76 3vc3_A Beta-cyanoalnine syntha 54.8 40 0.0014 29.8 7.9 64 42-105 78-142 (344)
77 4dg8_A PA1221; ANL superfamily 54.6 31 0.0011 33.5 7.7 83 25-111 184-268 (620)
78 3etc_A AMP-binding protein; ad 53.9 43 0.0015 32.1 8.5 70 43-112 260-332 (580)
79 2cf5_A Atccad5, CAD, cinnamyl 53.4 25 0.00084 31.3 6.3 86 16-104 144-233 (357)
80 1uuf_A YAHK, zinc-type alcohol 52.5 29 0.00098 31.1 6.6 84 16-103 158-245 (369)
81 3two_A Mannitol dehydrogenase; 52.3 33 0.0011 30.3 7.0 84 14-101 139-225 (348)
82 1rjw_A ADH-HT, alcohol dehydro 51.3 74 0.0025 27.9 9.1 83 15-101 128-213 (339)
83 3fpc_A NADP-dependent alcohol 50.6 23 0.00079 31.4 5.7 83 17-103 132-218 (352)
84 3ite_A SIDN siderophore synthe 50.3 73 0.0025 30.2 9.5 99 160-261 33-134 (562)
85 3krt_A Crotonyl COA reductase; 47.1 45 0.0015 30.9 7.2 86 14-103 188-280 (456)
86 4a2c_A Galactitol-1-phosphate 47.0 86 0.003 27.4 8.9 87 14-104 124-213 (346)
87 4fuq_A Malonyl COA synthetase; 47.0 94 0.0032 29.0 9.6 81 181-263 28-110 (503)
88 4dvj_A Putative zinc-dependent 46.5 78 0.0027 28.1 8.5 88 14-104 128-225 (363)
89 3l8c_A D-alanine--poly(phospho 46.5 60 0.002 30.5 8.2 86 25-111 165-253 (521)
90 1pl8_A Human sorbitol dehydrog 45.1 1E+02 0.0035 27.1 9.1 84 15-103 136-223 (356)
91 3tsy_A Fusion protein 4-coumar 44.6 1.5E+02 0.005 30.6 11.3 96 160-264 74-171 (979)
92 3goh_A Alcohol dehydrogenase, 44.4 51 0.0017 28.6 6.8 83 14-101 105-190 (315)
93 3ju7_A Putative PLP-dependent 44.3 54 0.0018 29.3 7.1 60 41-103 70-136 (377)
94 1pg4_A Acetyl-COA synthetase; 43.4 87 0.003 30.5 9.0 96 161-261 90-187 (652)
95 4h1h_A LMO1638 protein; MCCF-l 43.3 84 0.0029 27.5 8.0 60 45-104 8-86 (327)
96 1vj0_A Alcohol dehydrogenase, 43.2 1E+02 0.0036 27.5 8.9 86 14-103 157-247 (380)
97 1yqd_A Sinapyl alcohol dehydro 42.2 47 0.0016 29.6 6.3 85 16-103 151-239 (366)
98 1o69_A Aminotransferase; struc 40.8 1.1E+02 0.0038 27.2 8.8 59 43-104 66-130 (394)
99 1e3j_A NADP(H)-dependent ketos 39.8 1.2E+02 0.0041 26.6 8.6 83 15-102 133-218 (352)
100 3jyn_A Quinone oxidoreductase; 38.9 1.4E+02 0.0048 25.8 8.9 84 16-103 104-192 (325)
101 4aec_A Cysteine synthase, mito 38.9 97 0.0033 28.4 7.8 63 42-104 166-229 (430)
102 2q3b_A Cysteine synthase A; py 38.8 1.2E+02 0.004 26.2 8.3 64 41-105 58-122 (313)
103 3sr3_A Microcin immunity prote 38.8 96 0.0033 27.3 7.6 60 45-104 9-87 (336)
104 3uog_A Alcohol dehydrogenase; 38.0 1.4E+02 0.0049 26.3 8.9 84 15-102 152-239 (363)
105 3uko_A Alcohol dehydrogenase c 38.0 91 0.0031 27.8 7.6 94 5-103 147-245 (378)
106 4e5s_A MCCFLIKE protein (BA_56 38.0 1.2E+02 0.004 26.7 8.0 60 45-104 8-86 (331)
107 4ej6_A Putative zinc-binding d 37.9 55 0.0019 29.2 6.1 82 16-102 148-233 (370)
108 1f8f_A Benzyl alcohol dehydrog 37.7 68 0.0023 28.5 6.7 84 16-103 154-242 (371)
109 4dup_A Quinone oxidoreductase; 37.4 1E+02 0.0035 27.1 7.8 85 15-103 130-219 (353)
110 1y80_A Predicted cobalamin bin 37.3 98 0.0034 24.9 7.0 80 25-104 57-147 (210)
111 4a0s_A Octenoyl-COA reductase/ 36.3 69 0.0024 29.4 6.6 84 15-102 181-271 (447)
112 3tla_A MCCF; serine protease, 35.3 1.2E+02 0.004 27.2 7.6 60 45-104 39-117 (371)
113 2pqm_A Cysteine synthase; OASS 35.2 1.3E+02 0.0044 26.5 8.0 63 42-105 70-133 (343)
114 1y7l_A O-acetylserine sulfhydr 35.0 1.2E+02 0.0042 26.1 7.8 63 42-105 54-117 (316)
115 2vsq_A Surfactin synthetase su 35.0 59 0.002 34.9 6.6 83 25-111 627-712 (1304)
116 2v03_A Cysteine synthase B; py 34.1 1.7E+02 0.0059 25.0 8.5 62 42-104 53-115 (303)
117 2jtq_A Phage shock protein E; 34.0 75 0.0026 20.9 5.0 44 25-75 24-67 (85)
118 1eg5_A Aminotransferase; PLP-d 34.0 1.2E+02 0.004 26.7 7.7 8 48-55 88-95 (384)
119 1piw_A Hypothetical zinc-type 33.9 85 0.0029 27.8 6.7 84 16-103 144-230 (360)
120 2dph_A Formaldehyde dismutase; 33.9 43 0.0015 30.3 4.8 77 18-98 148-232 (398)
121 1e3i_A Alcohol dehydrogenase, 33.9 98 0.0034 27.5 7.1 84 16-103 159-247 (376)
122 1wy5_A TILS, hypothetical UPF0 33.9 2E+02 0.007 24.8 9.0 73 33-105 7-93 (317)
123 1ve1_A O-acetylserine sulfhydr 33.8 1.8E+02 0.0063 24.8 8.7 63 42-105 52-117 (304)
124 2egu_A Cysteine synthase; O-ac 33.8 1.3E+02 0.0045 25.9 7.7 63 42-105 57-120 (308)
125 1qor_A Quinone oxidoreductase; 33.7 2E+02 0.0068 24.8 9.0 83 16-102 104-191 (327)
126 3ri6_A O-acetylhomoserine sulf 33.7 1.2E+02 0.0042 27.7 7.8 52 54-105 101-155 (430)
127 2fzw_A Alcohol dehydrogenase c 33.4 57 0.0019 29.1 5.4 85 15-103 153-242 (373)
128 3dzz_A Putative pyridoxal 5'-p 33.4 1.1E+02 0.0038 27.0 7.5 55 46-103 106-167 (391)
129 2j8z_A Quinone oxidoreductase; 33.1 1.1E+02 0.0039 26.8 7.4 83 16-102 126-213 (354)
130 3gms_A Putative NADPH:quinone 33.1 1.3E+02 0.0045 26.2 7.7 86 14-103 106-196 (340)
131 3gqw_A Fatty acid AMP ligase; 32.9 2.2E+02 0.0076 26.8 9.9 86 180-267 48-142 (576)
132 1yb5_A Quinone oxidoreductase; 32.2 2.6E+02 0.0088 24.5 9.7 84 15-102 133-221 (351)
133 2e7j_A SEP-tRNA:Cys-tRNA synth 31.7 1.8E+02 0.0063 25.2 8.6 55 46-103 90-154 (371)
134 1cdo_A Alcohol dehydrogenase; 31.5 63 0.0021 28.8 5.4 84 16-103 156-244 (374)
135 4eye_A Probable oxidoreductase 31.0 86 0.0029 27.5 6.1 85 15-103 122-211 (342)
136 3a2k_A TRNA(Ile)-lysidine synt 31.0 1.6E+02 0.0055 27.2 8.2 70 36-105 4-87 (464)
137 2hcy_A Alcohol dehydrogenase 1 31.0 1.7E+02 0.0059 25.5 8.2 84 14-101 132-219 (347)
138 2eih_A Alcohol dehydrogenase; 30.8 2.4E+02 0.0081 24.6 9.0 83 16-102 130-217 (343)
139 1mdo_A ARNB aminotransferase; 30.6 1.1E+02 0.0037 27.2 6.9 56 44-103 74-134 (393)
140 2jhf_A Alcohol dehydrogenase E 30.6 66 0.0022 28.7 5.3 83 16-102 155-242 (374)
141 3a2b_A Serine palmitoyltransfe 30.0 2.3E+02 0.0077 25.1 9.0 55 46-104 124-181 (398)
142 1wly_A CAAR, 2-haloacrylate re 29.9 2.4E+02 0.008 24.4 8.8 83 16-102 107-196 (333)
143 3ijw_A Aminoglycoside N3-acety 29.7 38 0.0013 28.7 3.3 24 35-58 18-41 (268)
144 1z7w_A Cysteine synthase; tran 29.4 1.9E+02 0.0064 25.1 8.0 64 42-105 58-122 (322)
145 3gaz_A Alcohol dehydrogenase s 28.9 2E+02 0.0068 25.1 8.2 79 16-99 114-197 (343)
146 1xa0_A Putative NADPH dependen 28.8 1.1E+02 0.0039 26.4 6.5 85 15-103 109-201 (328)
147 3pc3_A CG1753, isoform A; CBS, 28.7 1.7E+02 0.0057 27.6 8.0 61 43-104 106-167 (527)
148 1oft_A SULA, hypothetical prot 28.3 1.8E+02 0.0061 22.4 6.5 33 41-73 92-124 (161)
149 3dwg_A Cysteine synthase B; su 28.3 1.8E+02 0.0061 25.3 7.6 62 42-104 65-127 (325)
150 3mfq_A TROA, high-affinity zin 27.8 64 0.0022 27.6 4.5 81 28-108 139-224 (282)
151 2nyg_A YOKD protein; PFAM02522 27.7 43 0.0015 28.5 3.3 23 36-58 17-39 (273)
152 3sma_A FRBF; N-acetyl transfer 27.7 43 0.0015 28.7 3.3 31 21-58 18-48 (286)
153 1ofu_X SULA, hypothetical prot 27.5 1.7E+02 0.006 21.0 6.5 37 38-74 47-83 (119)
154 2bkw_A Alanine-glyoxylate amin 26.6 2.4E+02 0.0082 24.6 8.5 56 47-103 84-144 (385)
155 4b7c_A Probable oxidoreductase 26.5 1.8E+02 0.0062 25.2 7.4 58 42-102 143-201 (336)
156 2e18_A NH(3)-dependent NAD(+) 26.5 1.6E+02 0.0054 24.6 6.7 70 31-103 7-82 (257)
157 3fbg_A Putative arginate lyase 26.3 3.2E+02 0.011 23.7 9.2 85 16-104 108-203 (346)
158 1gu7_A Enoyl-[acyl-carrier-pro 26.1 1.1E+02 0.0037 27.0 6.0 79 24-103 138-223 (364)
159 3isl_A Purine catabolism prote 26.1 1.8E+02 0.006 25.9 7.5 32 72-103 85-116 (416)
160 1t3i_A Probable cysteine desul 26.1 1.6E+02 0.0053 26.3 7.2 9 47-55 116-124 (420)
161 1toa_A Tromp-1, protein (perip 26.0 80 0.0027 27.5 4.8 64 45-108 192-258 (313)
162 1iz0_A Quinone oxidoreductase; 26.0 1.6E+02 0.0053 25.1 6.8 85 14-102 88-176 (302)
163 3kki_A CAI-1 autoinducer synth 25.6 1.4E+02 0.0048 26.7 6.7 55 46-104 140-194 (409)
164 2z9v_A Aspartate aminotransfer 25.2 1.6E+02 0.0055 25.9 7.0 32 72-103 105-141 (392)
165 2duw_A Putative COA-binding pr 25.0 1.3E+02 0.0046 22.4 5.4 30 68-97 89-118 (145)
166 3b8x_A WBDK, pyridoxamine 5-ph 24.8 1.9E+02 0.0066 25.5 7.5 55 45-103 76-135 (390)
167 3f9t_A TDC, L-tyrosine decarbo 24.7 3.5E+02 0.012 23.5 9.3 18 84-101 159-176 (397)
168 2fsx_A RV0390, COG0607: rhodan 24.6 80 0.0027 23.6 4.1 46 35-80 66-112 (148)
169 1tt7_A YHFP; alcohol dehydroge 24.5 1.2E+02 0.0041 26.3 5.9 83 16-102 111-201 (330)
170 1urh_A 3-mercaptopyruvate sulf 24.3 1.4E+02 0.0047 25.2 6.1 41 34-74 71-112 (280)
171 2z61_A Probable aspartate amin 24.1 1.9E+02 0.0066 25.2 7.3 50 47-102 111-160 (370)
172 2c81_A Glutamine-2-deoxy-scyll 24.1 1.1E+02 0.0039 27.4 5.8 56 43-102 76-136 (418)
173 1pqw_A Polyketide synthase; ro 24.0 2.6E+02 0.0087 21.8 8.4 79 19-101 5-88 (198)
174 2yxb_A Coenzyme B12-dependent 23.8 2.4E+02 0.0083 21.4 7.0 42 63-104 36-77 (161)
175 1elu_A L-cysteine/L-cystine C- 23.7 1.4E+02 0.0049 26.1 6.4 12 92-103 122-133 (390)
176 2i2x_B MTAC, methyltransferase 23.7 2.8E+02 0.0094 23.1 7.7 82 23-104 91-182 (258)
177 2rb4_A ATP-dependent RNA helic 23.7 2.4E+02 0.0083 21.4 7.8 70 33-105 21-93 (175)
178 3kax_A Aminotransferase, class 23.7 2.6E+02 0.0087 24.4 8.1 53 46-102 103-162 (383)
179 3ndn_A O-succinylhomoserine su 23.5 2.4E+02 0.0082 25.4 7.8 24 294-317 342-365 (414)
180 4dq6_A Putative pyridoxal phos 23.4 1.9E+02 0.0066 25.3 7.2 51 47-102 112-170 (391)
181 3euc_A Histidinol-phosphate am 23.3 1.9E+02 0.0067 25.1 7.1 55 46-103 106-164 (367)
182 3l6b_A Serine racemase; pyrido 23.1 1.1E+02 0.0036 27.1 5.2 56 50-106 77-132 (346)
183 2vn8_A Reticulon-4-interacting 23.0 1.8E+02 0.0062 25.7 6.8 83 16-103 143-234 (375)
184 2ch1_A 3-hydroxykynurenine tra 22.9 2.2E+02 0.0076 25.0 7.5 20 83-102 130-149 (396)
185 3zrp_A Serine-pyruvate aminotr 22.8 2.3E+02 0.0079 24.6 7.6 58 46-104 74-135 (384)
186 2jgn_A DBX, DDX3, ATP-dependen 22.6 2.2E+02 0.0076 22.1 6.6 75 32-108 31-108 (185)
187 1zl0_A Hypothetical protein PA 22.5 2.9E+02 0.01 23.9 7.7 61 45-105 13-89 (311)
188 3cq5_A Histidinol-phosphate am 22.4 2.8E+02 0.0097 24.1 8.0 54 47-103 114-171 (369)
189 3t18_A Aminotransferase class 22.4 2.9E+02 0.0099 24.5 8.2 55 46-103 122-185 (413)
190 1c7n_A Cystalysin; transferase 22.3 2.1E+02 0.0073 25.2 7.3 19 83-101 151-169 (399)
191 1wxi_A NH(3)-dependent NAD(+) 22.3 3.5E+02 0.012 22.8 9.3 78 23-103 15-110 (275)
192 1b9h_A AHBA synthase, protein 22.2 1.9E+02 0.0064 25.5 6.8 55 43-101 72-131 (388)
193 3if4_A Integron cassette prote 22.0 1.1E+02 0.0038 21.2 3.7 20 21-40 70-89 (119)
194 3i16_A Aluminum resistance pro 21.8 1.9E+02 0.0065 26.4 6.8 59 46-104 112-184 (427)
195 1kol_A Formaldehyde dehydrogen 21.8 1.8E+02 0.0061 26.0 6.6 79 18-100 148-234 (398)
196 4hvk_A Probable cysteine desul 21.7 1.1E+02 0.0039 26.7 5.2 33 71-103 86-119 (382)
197 2h6e_A ADH-4, D-arabinose 1-de 21.7 1.9E+02 0.0066 25.2 6.6 80 18-102 134-222 (344)
198 1e0c_A Rhodanese, sulfurtransf 21.5 1.5E+02 0.0051 24.8 5.7 42 34-75 66-108 (271)
199 3hh8_A Metal ABC transporter s 21.5 73 0.0025 27.4 3.7 78 28-107 159-243 (294)
200 4eb5_A Probable cysteine desul 21.4 1E+02 0.0034 27.1 4.8 33 71-103 86-119 (382)
201 2kke_A Uncharacterized protein 21.4 1.1E+02 0.0037 17.2 3.0 28 389-416 6-34 (53)
202 4h27_A L-serine dehydratase/L- 21.3 1.3E+02 0.0043 26.8 5.3 53 54-106 97-149 (364)
203 3nnk_A Ureidoglycine-glyoxylat 21.3 2.5E+02 0.0086 24.7 7.6 12 179-190 209-220 (411)
204 3hvy_A Cystathionine beta-lyas 21.0 2.2E+02 0.0076 25.9 7.0 59 46-104 113-184 (427)
205 1e0c_A Rhodanese, sulfurtransf 20.9 1.5E+02 0.0052 24.8 5.6 40 36-75 210-249 (271)
206 3n75_A LDC, lysine decarboxyla 20.8 2.2E+02 0.0075 28.1 7.2 56 46-104 232-306 (715)
207 1o8b_A Ribose 5-phosphate isom 20.7 47 0.0016 27.2 2.1 37 386-423 160-198 (219)
208 2d59_A Hypothetical protein PH 20.6 1.3E+02 0.0045 22.4 4.6 31 68-98 96-126 (144)
209 3kgw_A Alanine-glyoxylate amin 20.5 2.2E+02 0.0076 24.9 7.0 13 178-190 218-230 (393)
210 1d2f_A MALY protein; aminotran 20.4 2.6E+02 0.0088 24.6 7.4 53 47-102 109-168 (390)
211 1jvb_A NAD(H)-dependent alcoho 20.3 2.6E+02 0.0088 24.3 7.2 81 18-102 138-222 (347)
212 1xvl_A Mn transporter, MNTC pr 20.2 89 0.0031 27.3 4.0 61 46-108 200-265 (321)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=1.4e-66 Score=508.59 Aligned_cols=400 Identities=37% Similarity=0.574 Sum_probs=337.5
Q ss_pred cCCCCCCC---CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 14 SLRPPLVL---PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 14 ~~~~~~~~---~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
++++++.. .+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.+
T Consensus 36 p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~ 115 (536)
T 3ni2_A 36 SSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAK 115 (536)
T ss_dssp TTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHH
T ss_pred CCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHH
Confidence 44444432 356999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEEEcccchHHHhcCCC--CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEe
Q 014435 91 QVKDSNPKLVITVPELWDKVKDLNL--PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALL 168 (424)
Q Consensus 91 ~l~~~~~~~ii~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 168 (424)
+++.++++++|++++....+..... ...++..+. .......++++..... ...+.....++|+++|+
T Consensus 116 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~ 184 (536)
T 3ni2_A 116 HAKASRAKLLITQACYYEKVKDFARESDVKVMCVDS---------APDGCLHFSELTQADE--NEAPQVDISPDDVVALP 184 (536)
T ss_dssp HHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSC---------CCTTCEETHHHHTSCG--GGCCCCCCCTTSEEECC
T ss_pred HHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecC---------CCCCccCHHHHhhccc--cccccCCCCccCEEEEE
Confidence 9999999999999877665544311 111111111 1122334555544322 22334456789999999
Q ss_pred cCCCCCCCcchhhhcHHHHHHHHHHHHhhh--hhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHH
Q 014435 169 YSSGTTGVSKGVILTHKNFIAASLMISAHQ--ELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMAL 246 (424)
Q Consensus 169 ~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 246 (424)
|||||||.||+|+++|+++...+....... .+....++++++.+|++|.+++...++.++..|+++++.+.+++..++
T Consensus 185 ~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~ 264 (536)
T 3ni2_A 185 YSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLL 264 (536)
T ss_dssp EECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTHHHHHHHTCCEEECSSCCHHHHH
T ss_pred cCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHH
Confidence 999999999999999999988765443221 112234589999999999999976788999999999999999999999
Q ss_pred HHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecC-
Q 014435 247 RAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLEN- 325 (424)
Q Consensus 247 ~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~- 325 (424)
+.++++++|++.++|+++..+.+.......++++||.+++||+++++++.+++++.++++++++.||+||++++++...
T Consensus 265 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~ 344 (536)
T 3ni2_A 265 GLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLA 344 (536)
T ss_dssp HHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCCCHHHHHHHHHHCTTSEEEEEEECGGGSSEEEECGG
T ss_pred HHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCCCCHHHHHHHHHHCCCCCccccccccccchhhhcccc
Confidence 9999999999999999999999988777778999999999999999999999999998899999999999987665432
Q ss_pred --CCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecC
Q 014435 326 --PLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSN 390 (424)
Q Consensus 326 --~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~ 390 (424)
........+++|+|+++++++|+|++++++++.|+.|||+++|+.++.|| ++||+|||+|++++|
T Consensus 345 ~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~~d 424 (536)
T 3ni2_A 345 FAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDD 424 (536)
T ss_dssp GSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTT
T ss_pred cCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCccEEEEeCcccchhhcCChhHHHhhccCCCceEcccEEEEcCC
Confidence 12224567899999999999999988899999999999999999999999 679999999999999
Q ss_pred Cce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 391 DHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 391 g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 425 G~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~ 466 (536)
T 3ni2_A 425 DELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVG 466 (536)
T ss_dssp SCEEEEEECSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEE
T ss_pred ceEEEEecccceEEECCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 987 3 999999999999999999999999999985
No 2
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=2.1e-65 Score=501.77 Aligned_cols=393 Identities=28% Similarity=0.435 Sum_probs=297.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++
T Consensus 47 ~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~v 126 (550)
T 3rix_A 47 IEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVV 126 (550)
T ss_dssp TCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEE
T ss_pred CCcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHHHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEE
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchHHHhcCC-----CCeEEEecCCCccccccccCCCcccchhhhhhccCCC-----CCCCCCCCCCCCEEEEecC
Q 014435 101 ITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV-----TDIPDVSVKQTDAAALLYS 170 (424)
Q Consensus 101 i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~T 170 (424)
|++++....+.... ...++..... .......++.+++...... ...+.....++++++|+||
T Consensus 127 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~T 198 (550)
T 3rix_A 127 FVSKKGLQKILNVQKKLPIIQKIIIMDSK--------TDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNS 198 (550)
T ss_dssp EECGGGHHHHHHHHHHCTTCCEEEETTCS--------SCBTTBCBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC
T ss_pred EEcHHHHHHHHHHHhhCCCcceEEEEcCC--------ccccCcccHHHHhhccccccccccccCCCCCCCCCCEEEEEEC
Confidence 99988766554321 1222222111 1112334455554432211 1112222346889999999
Q ss_pred CCCCCCcchhhhcHHHHHHHHHHHHhhhh-hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHH
Q 014435 171 SGTTGVSKGVILTHKNFIAASLMISAHQE-LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAI 249 (424)
Q Consensus 171 SGtTG~pK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 249 (424)
|||||.||+|.++|+++............ .....++++++.+|++|.+|+. ..+.++..|+++++.+.+++..+++.+
T Consensus 199 SGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i 277 (550)
T 3rix_A 199 SGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMF-TTLGYLICGFRVVLMYRFEEELFLRSL 277 (550)
T ss_dssp -----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHH-HHHHHHHHTCEEEECSSCCHHHHHHHH
T ss_pred CCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHH-HHHHHHHcCCEEEEeCCCCHHHHHHHH
Confidence 99999999999999999877655443321 2223459999999999999985 677889999999999999999999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++++|+++++|+++..|.+.......++++||.+++||+++++++.+++.+.++...+++.||+||+++.++.....
T Consensus 278 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-- 355 (550)
T 3rix_A 278 QDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEG-- 355 (550)
T ss_dssp HHTTCSEEEECHHHHHHHHHCCGGGGSCCTTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCTT--
T ss_pred HHcCCeEEEeCcHHHHHHHhCccccccCcccccEEEEecCCCCHHHHHHHHHHcCCCccccccCcCccccceecCCCC--
Confidence 999999999999999999998877777899999999999999999999999999645699999999998877765544
Q ss_pred ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce---
Q 014435 330 VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN--- 393 (424)
Q Consensus 330 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~--- 393 (424)
....+++|+|+++++++|+|++++++++.|+.|||+++|+.++.|| ++||+|||+|++++||.+
T Consensus 356 ~~~~~~vG~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~ 435 (550)
T 3rix_A 356 DDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIV 435 (550)
T ss_dssp CCCTTEEEEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC
T ss_pred CCCCCCcccccCCcEEEEEeCCCCcCCCCCCCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeCCceEEEE
Confidence 4567899999999999999988899999999999999999999999 689999999999999987
Q ss_pred ----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 436 GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~ 471 (550)
T 3rix_A 436 DRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAG 471 (550)
T ss_dssp ------------------------------------
T ss_pred ecchheeEECCEEECHHHHHHHHHhCCCcceEEEEE
Confidence 3 999999999999999999999999999985
No 3
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=4.3e-65 Score=498.77 Aligned_cols=391 Identities=29% Similarity=0.422 Sum_probs=327.5
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++++||+||.++++++|+.|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|
T Consensus 50 ~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi 129 (548)
T 2d1s_A 50 GVDYSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVF 129 (548)
T ss_dssp CCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEE
T ss_pred CCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcC----C-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCC------CCCCEEEEecC
Q 014435 102 TVPELWDKVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSV------KQTDAAALLYS 170 (424)
Q Consensus 102 ~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~T 170 (424)
++++....+... . ...++.. +... .......++++...... ...+.... .++++++++||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~a~i~~T 200 (548)
T 2d1s_A 130 SSKKGLDKVITVQKTVTTIKTIVIL-DSKV-------DYRGYQCLDTFIKRNTP-PGFQASSFKTVEVDRKEQVALIMNS 200 (548)
T ss_dssp ECTTTHHHHHHHHHHSTTCCEEEET-TCSS-------CBTTBCBHHHHHHHTSC-TTCCGGGCCCCCCCTTTCEEEEECC
T ss_pred EcHHHHHHHHHHhcCCCCCCEEEEe-CCcc-------cccccccHHHHHhcCcc-ccCCcccccccccCCCCCEEEEEeC
Confidence 998876655432 1 1222221 1100 00122345555443321 10111112 23899999999
Q ss_pred CCCCCCcchhhhcHHHHHHHHHHHHhhhh-hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHH
Q 014435 171 SGTTGVSKGVILTHKNFIAASLMISAHQE-LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAI 249 (424)
Q Consensus 171 SGtTG~pK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 249 (424)
|||||.||+|.++|+++............ .....++++++.+|++|.+|+...++.++ .|+++++.+.+++..+++.+
T Consensus 201 SGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i 279 (548)
T 2d1s_A 201 SGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTL 279 (548)
T ss_dssp SSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHH
T ss_pred CCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHH
Confidence 99999999999999999887665543311 12234589999999999999975567777 99999999889999999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++++|+++++|+++..|.+.......+++++|.+++||+++++++.+++.+.++++++++.||+||+++.++.....
T Consensus 280 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~-- 357 (548)
T 2d1s_A 280 QDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIITPEG-- 357 (548)
T ss_dssp HHTTEEEEEECHHHHHHHHHCSCGGGSCCTTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCTT--
T ss_pred HHcCCcEEEecHHHHHHHHhCcccccccccceeEEEEcCccCCHHHHHHHHHHcCCCceeeccccccccceeeecCcc--
Confidence 999999999999999999987766666789999999999999999999999999889999999999998776664332
Q ss_pred ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce---
Q 014435 330 VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN--- 393 (424)
Q Consensus 330 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~--- 393 (424)
....+++|+|+++++++|+|++++++++.|+.|||+++|+.++.|| ++||+|||+|++++||.+
T Consensus 358 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~ 437 (548)
T 2d1s_A 358 DDKPGASGKVVPLFKAKVIDLDTKKSLGPNRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIV 437 (548)
T ss_dssp CCCTTCCBEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEE
T ss_pred cCCCCCCCccCCCceEEEEeCCcCccCCCCCCeEEEECCHHHhhhhcCChHHhhhcccCCcEEEccCEEEEcCCCeEEEe
Confidence 4567899999999999999988899999999999999999999999 579999999999999987
Q ss_pred ----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 438 GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~V~~ 473 (548)
T 2d1s_A 438 DRLKSLIKYKGYQVPPAELESVLLQHPSIFDAGVAG 473 (548)
T ss_dssp EEGGGCBCBTTCCBCHHHHHHHHHTSTTEEEEEEEE
T ss_pred ccccceEEECCEEECHHHHHHHHHhCCCccEEEEEE
Confidence 3 899999999999999999999999999985
No 4
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=5.9e-66 Score=500.01 Aligned_cols=382 Identities=27% Similarity=0.364 Sum_probs=322.6
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|
T Consensus 26 ~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi 105 (503)
T 4fuq_A 26 GDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVV 105 (503)
T ss_dssp CCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEEE
T ss_pred CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCC---CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcc
Q 014435 102 TVPELWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSK 178 (424)
Q Consensus 102 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 178 (424)
++++....+.... ...+...... ....+.+...... ...+.....++|+++++|||||||.||
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PK 171 (503)
T 4fuq_A 106 CDPSKRDGIAAIAAKVGATVETLGPD------------GRGSLTDAAAGAS--EAFATIDRGADDLAAILYTSGTTGRSK 171 (503)
T ss_dssp ECGGGTTTTHHHHHHHTCEEEECCTT------------SCSHHHHHHHTSC--SCCCCCCCCTTSEEEEEECC--CCSCC
T ss_pred ECchhhHHHHHHHhhcCceEEEecCC------------cccccchhhhcCC--CCcCcCCCCCCCeEEEEECCCcccCCe
Confidence 9987554332221 0111111110 0011111111111 222334556899999999999999999
Q ss_pred hhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEE
Q 014435 179 GVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 179 ~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~ 258 (424)
+|.++|+++.............. .++++++.+|++|.+|+....+.++..|+++++.+.+++..+++.++ ++|+++
T Consensus 172 gV~~sh~~l~~~~~~~~~~~~~~--~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~--~~t~~~ 247 (503)
T 4fuq_A 172 GAMLSHDNLASNSLTLVDYWRFT--PDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLPKFDPDKILDLMA--RATVLM 247 (503)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCC--TTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECSSCCHHHHHHHHT--TCCEEE
T ss_pred EEEEeHHHHHHHHHHHHHHhCCC--CCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcCCCCHHHHHHHHh--hcCEEE
Confidence 99999999998877776665554 34999999999999998656778899999999999999999999998 899999
Q ss_pred echHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCcccc
Q 014435 259 VVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGT 338 (424)
Q Consensus 259 ~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~ 338 (424)
++|+++..+++........++++|.+++||+++++++.++|.+.+ +.++++.||+||++..++... ......+++|+
T Consensus 248 ~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~--~~~~~~~~~G~ 324 (503)
T 4fuq_A 248 GVPTFYTRLLQSPRLTKETTGHMRLFISGSAPLLADTHREWSAKT-GHAVLERYGMTETNMNTSNPY--DGDRVPGAVGP 324 (503)
T ss_dssp ECHHHHHHHHTCTTCSTTTTTTCCEEEECSSCCCHHHHHHHHHHH-SCCEEECCEETTTEECBCCCS--SSCCCTTEEEE
T ss_pred EHHHHHHHHHhCCCccccchhhcEEEEECCCCCCHHHHHHHHHHh-CCCccceEcccccCcccccCC--CCCCcCCcccc
Confidence 999999999998777777789999999999999999999999988 689999999999886654322 23566789999
Q ss_pred ccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEecCCce-------e-eEe
Q 014435 339 LVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-------D-FFC 397 (424)
Q Consensus 339 ~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-------d-i~~ 397 (424)
|+++++++|+|++++++++.|+.|||+++|+.++.|| ++||+|||+|++++||.+ | |++
T Consensus 325 p~~~~~~~i~d~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~ 404 (503)
T 4fuq_A 325 ALPGVSARVTDPETGKELPRGDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKIDERGYVHILGRGKDLVIT 404 (503)
T ss_dssp BCTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEECTTCEEEECCSSTTCEEE
T ss_pred CCCCeEEEEEECCCCCCCcCCCceEEEEECCchhhhhcCChhhhHhhhCCCCCeEcceeEEEcCCCcEEEEecCCCEEEE
Confidence 9999999999988999999999999999999999999 689999999999999987 3 999
Q ss_pred eeeeeChhhHHHHHhcCCCcccceecC
Q 014435 398 KLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 398 ~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|++|+|.|||++|.+||+|.+|+|+|
T Consensus 405 ~G~~v~p~eIE~~l~~~p~V~~a~vv~ 431 (503)
T 4fuq_A 405 GGFNVYPKEIESEIDAMPGVVESAVIG 431 (503)
T ss_dssp TTEEECHHHHHHHHHTSTTEEEEEEEE
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEE
Confidence 999999999999999999999999974
No 5
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=2.1e-64 Score=494.56 Aligned_cols=384 Identities=28% Similarity=0.452 Sum_probs=319.0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++|
T Consensus 50 ~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i 129 (549)
T 3g7s_A 50 PESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDYVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLV 129 (549)
T ss_dssp CSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEE
T ss_pred cceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEE
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCC----CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCC-CCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVK-QTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~TSGtTG~ 176 (424)
++++....+.... ...++... .....+.++...... ..+..... ++|+++|+|||||||.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~ 194 (549)
T 3g7s_A 130 VHSMLYENFKPVLEKTGVERVFVVG-------------GEVNSLSEVMDSGSE--DFENVKVNPEEDVALIPYTGGTTGM 194 (549)
T ss_dssp EEGGGHHHHHHHHTTSCCCEEEEET-------------CSSSCHHHHHHHSCS--CCCCCCCCTTTSEEECCEECCCCC-
T ss_pred EChHHHHHHHHHHhhCCCcEEEEeC-------------CCCcCHHHHHhcCcc--ccccccCCCCCCEEEEEECCCccCC
Confidence 9988766554432 22222221 122345555544332 22222333 3899999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceE
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTV 256 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 256 (424)
||+|.++|+++...+.......... ..++++..+|++|.+++. .++.++..|+++++.+.+++..+++.++++++|+
T Consensus 195 PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 271 (549)
T 3g7s_A 195 PKGVMLTHFNLAANALQLAVATGLS--HMDTIVGCMPMFHSAEFG-LVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTF 271 (549)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHHCCC--TTCEEECCSCTTSHHHHH-HHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCE
T ss_pred CceEEEcHHHHHHHHHHHHHHcCCC--CCCEEEEeCcHHHHHHHH-HHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeE
Confidence 9999999999999887766655543 349999999999999996 4788899999999999999999999999999999
Q ss_pred EEechHHHHHHHhcccccc--CCCCCeeEEEecCCCCCHHHHHHHHHh----CC--CCeEEecccCccCCCceeecCCCC
Q 014435 257 WWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKN----IP--GATIFQGYGMTETCAPISLENPLV 328 (424)
Q Consensus 257 ~~~~p~~~~~l~~~~~~~~--~~~~~lr~~~~~g~~~~~~~~~~~~~~----~~--~~~~~~~yG~tE~~~~~~~~~~~~ 328 (424)
++++|+++..|.+...... .+++++|.+++||+++++++.+++.+. ++ ++++++.||+||++++++......
T Consensus 272 ~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~ 351 (549)
T 3g7s_A 272 SWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPLR 351 (549)
T ss_dssp EEECHHHHHHHHHHHHHSCCCCCCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEECCGGG
T ss_pred EEeCCHHHHHHHhhhhhhcccCCccceeEEEeCCccCCHHHHHHHHHHHHhhcCCccccccceEeccccchhhhcCCccc
Confidence 9999999999988765443 578999999999999999999999987 53 389999999999988777654432
Q ss_pred CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh---------------hh--ccccCceEEEecCC
Q 014435 329 GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF---------------EL--TVNCNLFSYFRSND 391 (424)
Q Consensus 329 ~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy---------------~~--~~~TgD~g~~~~~g 391 (424)
....+++|+|+++++++|+|++++++++.|+.|||+++|+.++.|| ++ ||+|||+|++++||
T Consensus 352 -~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~TGDl~~~~~dG 430 (549)
T 3g7s_A 352 -LDKSTTQGVPMSDIELKVISLEDGRELGVGESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFFRTGDVGFIDEEG 430 (549)
T ss_dssp -GGGTTSCCEECTTCEEEEECSSSCCEECTTCCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEEEEEEEEEECTTS
T ss_pred -cCcCCCccccCCCCEEEEEeCCCCcCCCCCCceEEEEECcchhhhhCCChhhhhhhhhccCCCCceEccCcEEEEcCCc
Confidence 3567899999999999999988999999999999999999999999 23 99999999999999
Q ss_pred ce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 392 HN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 392 ~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 431 ~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~ 471 (549)
T 3g7s_A 431 FLHFQDRVKEVIKYKGYTIAPFELEALLMKHEAVMDVAVIG 471 (549)
T ss_dssp CEEEEEEC------------CHHHHHHHTTSTTEEEEEEEC
T ss_pred eEEEeccccceEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 87 3 999999999999999999999999999985
No 6
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=4.7e-64 Score=493.77 Aligned_cols=387 Identities=22% Similarity=0.293 Sum_probs=322.2
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|
T Consensus 84 ~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii 163 (580)
T 3etc_A 84 EKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIV 163 (580)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEE
T ss_pred EeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecccch--HHHhcC----C-C-CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCC--CCCCCCCEEEEecCC
Q 014435 102 TVPELW--DKVKDL----N-L-PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD--VSVKQTDAAALLYSS 171 (424)
Q Consensus 102 ~~~~~~--~~~~~~----~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~TS 171 (424)
++.+.. ..+... . . ..++.... .....+..+.+.+.........+. ....++|+++++|||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TS 234 (580)
T 3etc_A 164 CIAEDDVPEQVDEAHAECGDIPLKKAKVGG---------DVLEGWIDFRKELEESSPIFERPTGEVSTKNEDICLVYFSS 234 (580)
T ss_dssp EESSTTHHHHHHHHHHHHCSCCCEEEEESS---------SCCTTCEEHHHHHHHSCSCCCCCCGGGSCCTTSEEEEEEEC
T ss_pred EecchhHHHHHHHHhhhCCCcceEEEEeCC---------ccccccccHHHHHhhCCcccccCccccCCCCCCcEEEEEeC
Confidence 987654 333221 1 1 12222211 112344556666554332111111 345789999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec--CCCCHHHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM--GKFDIEMALRAI 249 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~--~~~~~~~~~~~i 249 (424)
||||.||+|.++|.++............. ..++++++..|+.|..+.+..++.++..|+++++. ..+++..+++.+
T Consensus 235 GTTG~PKgV~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i 312 (580)
T 3etc_A 235 GTAGFPKMVEHDNTYPLGHILTAKYWQNV--EDDGLHYTVADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKA 312 (580)
T ss_dssp CSSSSCEEEEEETTHHHHHHHHHHTTSCC--CTTCEEEECCCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHH
T ss_pred CCCCCccEEEeccHHHHHHHHHHHHhhCC--CCCceEEEeCChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHH
Confidence 99999999999999887765543333333 34489999999999888876688899999999987 568999999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++++|+++++|++++.|.+.. ....++++||.+++||+++++++.++|.+.+ ++++++.||+||++..++.....
T Consensus 313 ~~~~vt~~~~~P~~~~~l~~~~-~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~~~~-- 388 (580)
T 3etc_A 313 SKYGVTTFCAPPTIYRFLIKED-LSHYNFSTLKYAVVAGEPLNPEVFNRFLEFT-GIKLMEGFGQTETVVTIATFPWM-- 388 (580)
T ss_dssp HHHTCCEEEECHHHHHHHHTSC-C---CCTTCCEEEECSSCCCHHHHHHHHHHH-SCCCEEEECCTTSSCCEECCTTS--
T ss_pred HHHCCeEEEccHHHHHHHHhcc-cccCCCccceEEEEccCCCCHHHHHHHHHHh-CCeEecccccccccceeecCCCC--
Confidence 9999999999999999998863 3455789999999999999999999999988 69999999999998766654433
Q ss_pred ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEec-----CCcchhh------------hhccccCceEEEecCCc
Q 014435 330 VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG-----PNVTPVF------------ELTVNCNLFSYFRSNDH 392 (424)
Q Consensus 330 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~-----~~~~~gy------------~~~~~TgD~g~~~~~g~ 392 (424)
..+.+++|+|+++++++|+| +++++++.|+.|||+++| +.++.|| ++||+|||+|++++||.
T Consensus 389 ~~~~~~~G~p~~~~~v~ivd-~~g~~~~~g~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f~~gwy~TGDlg~~d~dG~ 467 (580)
T 3etc_A 389 EPKPGSIGKPTPGYKIELMD-RDGRLCEVGEEGEIVINTMEGKPVGLFVHYGKDPERTEETWHDGYYHTGDMAWMDEDGY 467 (580)
T ss_dssp CCCTTCCBEECTTCEEEEEC-TTSCBCCTTCCEEEEEECTTCCCTTCCCEETTCHHHHHHHEETTEEEEEEEEEECTTSC
T ss_pred CCCCCccccCCCCCEEEEEC-CCCCCCCCCCceEEEEecCCCCCCeeeccccCCHhHHHhhcCCCEEecCcEEEECCCCc
Confidence 56778999999999999999 689999999999999997 7788999 78999999999999998
Q ss_pred e-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 393 N-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 393 ~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 468 l~~~GR~dd~Ik~~G~~I~p~eIE~~l~~~p~V~~a~Vvg 507 (580)
T 3etc_A 468 LWFVGRADDIIKTSGYKVGPFEVESALIQHPAVLECAITG 507 (580)
T ss_dssp EEEEEESSSCEEETTEEECHHHHHHHHTTSTTEEEEEEEE
T ss_pred EEEEecCCCEEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 7 3 999999999999999999999999999985
No 7
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=2.8e-64 Score=489.90 Aligned_cols=384 Identities=23% Similarity=0.333 Sum_probs=322.2
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+
T Consensus 42 ~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 121 (517)
T 3r44_A 42 VRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIY 121 (517)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEE
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCcccCHHHHHHHHHhcCceEEEE
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhhh
Q 014435 103 VPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVIL 182 (424)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 182 (424)
+.+....+..+...... .. ..........+.+.+.... ...+.....++|+++|+|||||||.||+|++
T Consensus 122 ~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~ 190 (517)
T 3r44_A 122 GAPSAPVIDAIRAQADP------PG---TVTDWIGADSLAERLRSAA--ADEPAVECGGDDNLFIMYTSGTTGHPKGVVH 190 (517)
T ss_dssp CGGGHHHHHHHHHSSSC------CT---TCCEEEEHHHHHHHHHHCC--CCCCCCCCCTTSEEEEEEECC---CCEEEEE
T ss_pred CCchHHHHHHHHhccCC------cc---EEEEccCcccHHHHhhccC--cCCCCCCCCCCCeEEEEECCcccccCceeee
Confidence 98776655433110000 00 0000000122333333222 2233445678999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccceEEEechH
Q 014435 183 THKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPP 262 (424)
Q Consensus 183 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 262 (424)
+|+++.............. .++++++.+|++|.+++...++..+ .|+++++.+.+++..+++.++++++|++.++|+
T Consensus 191 sh~~l~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~ 267 (517)
T 3r44_A 191 THESVHSAASSWASTIDVR--YRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISMPQFDATKVWSLIVEERVCIGGAVPA 267 (517)
T ss_dssp EHHHHHHHHHHHHHHSCCC--TTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEECSSCCHHHHHHHHHHTTCCEEEECHH
T ss_pred eHHHHHHHHHHHHHhcCCC--CCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHH
Confidence 9999998877766555443 4499999999999999964455545 899999999999999999999999999999999
Q ss_pred HHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCccccccCC
Q 014435 263 IILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAG 342 (424)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~ 342 (424)
++..|.+.......+++++|.+++||+++++++.+++.+. ++++++.||+||+++.++...........+++|+|.++
T Consensus 268 ~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~ 345 (517)
T 3r44_A 268 ILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYAAK--NIEVVQGYALTESCGGGTLLLSEDALRKAGSAGRATMF 345 (517)
T ss_dssp HHHHHHHSHHHHHCCCTTCCEEEECSSCCCHHHHHHHHHT--TCEEEEEEECGGGTTCEEEECGGGTTTTTTCCBEECTT
T ss_pred HHHHHHhCcccccCCCCcccEEEECCCCCCHHHHHHHHhc--CCcEEEeecccccccceeecCCccccccCCCCCcCCCC
Confidence 9999998877667788999999999999999999999987 79999999999998877665544435667899999999
Q ss_pred cEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce-------e-eEeeeeee
Q 014435 343 VEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-------D-FFCKLFQV 402 (424)
Q Consensus 343 ~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v 402 (424)
++++|+| +++++++.| .|||+++|+.++.|| ++||+|||+|++++||.+ | |+++|++|
T Consensus 346 ~~~~i~d-~~~~~~~~g-~GEl~v~g~~v~~GY~~~p~~t~~~f~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v 423 (517)
T 3r44_A 346 TDVAVRG-DDGVIREHG-EGEVVIKSDILLKEYWNRPEATRDAFDNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENV 423 (517)
T ss_dssp EEEEEEC-TTSCEESSE-EEEEEEEETTSCSEETTCHHHHHHTEETTEEEEEEEEEECTTSCEEEEECGGGCEEETTEEE
T ss_pred eEEEEEC-CCCCCCCCC-CeEEEEeCcchhhhhCCChhhhHhhhcCCCEecceeEEEcCCeeEEEecCCcCEEEECCEEE
Confidence 9999999 689999999 899999999999999 689999999999999987 3 99999999
Q ss_pred ChhhHHHHHhcCCCcccceecC
Q 014435 403 APAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 403 ~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+|.|||++|.+||+|.+|+|+|
T Consensus 424 ~p~eIE~~l~~~p~V~~~~Vv~ 445 (517)
T 3r44_A 424 YPAEIESVIIGVPGVSEVAVIG 445 (517)
T ss_dssp CHHHHHHHHTTSTTEEEEEEEE
T ss_pred CHHHHHHHHHhCCCEeEEEEEe
Confidence 9999999999999999999985
No 8
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=9.5e-64 Score=488.60 Aligned_cols=390 Identities=24% Similarity=0.277 Sum_probs=321.7
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. ..+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++
T Consensus 39 p~~~A~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l 118 (539)
T 1mdb_A 39 GDRIAITCGNTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFC 118 (539)
T ss_dssp TTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHH
T ss_pred CCCEEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeEEecCCCCCCHHHHHHHH
Confidence 4444444 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchH--------HHh-cCC-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCC
Q 014435 93 KDSNPKLVITVPELWD--------KVK-DLN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQT 162 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~--------~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (424)
+.++++++|++++... .+. ... .+.++..... . .+.++..... ...+.....++
T Consensus 119 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~~~~--~~~~~~~~~~~ 182 (539)
T 1mdb_A 119 EFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEA-----------E---EFLPLEDLHT--EPVKLPEVKSS 182 (539)
T ss_dssp HHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCC-----------T---TSEEGGGCCC--CCCCCCCCCTT
T ss_pred HhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCc-----------c---chhhhhhccc--cccccCCCCcC
Confidence 9999999999876421 111 111 1222221110 0 1122221111 11122345679
Q ss_pred CEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHH-HHHHHhhcCceEEecCCCC
Q 014435 163 DAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMGKFD 241 (424)
Q Consensus 163 ~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~ 241 (424)
|+++++|||||||.||+|.++|+++............. ..++++++.+|++|.+++.. .++.++..|+++++.+.++
T Consensus 183 d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~~~~ 260 (539)
T 1mdb_A 183 DVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWL--DHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSPSPS 260 (539)
T ss_dssp SEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTC--CTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSSSS
T ss_pred ceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCC--CCCCEEEEeecccccchhhHHHHHHHHHhCCEEEECCCCC
Confidence 99999999999999999999999998887766555444 34499999999999999865 5889999999999999999
Q ss_pred HHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCce
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPI 321 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~ 321 (424)
+..+++.++++++|++.++|+++..+++.......++++||.+++||+++++++.+++.+.+ ++++++.||+||++. .
T Consensus 261 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~-~ 338 (539)
T 1mdb_A 261 PDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVF-GCTLQQVFGMAEGLV-N 338 (539)
T ss_dssp HHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSCCCHHHHTTHHHHT-CSEEEEEEECTTSCE-E
T ss_pred HHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCCCCHHHHHHHHHHh-CCcEEEEEcCCCCcc-c
Confidence 99999999999999999999999999987666666789999999999999999999999988 699999999999643 3
Q ss_pred eecCCCCCccCCCccccccCC-cEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEE
Q 014435 322 SLENPLVGVRRSGSAGTLVAG-VEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYF 387 (424)
Q Consensus 322 ~~~~~~~~~~~~~~~G~~~~~-~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~ 387 (424)
............+++|+|+++ .+++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|++
T Consensus 339 ~~~~~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~ 417 (539)
T 1mdb_A 339 YTRLDDPEEIIVNTQGKPMSPYDESRVWD-DHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRL 417 (539)
T ss_dssp ECCTTSCHHHHHHCCCEESSTTCEEEEEC-TTSCBCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEE
T ss_pred ccCCCCcHHhcCCCCCcccCCCceEEEEC-CCCCCCcCCCcceEEeeCcccchhhcCChhhhhhhccCCCCeecCceEEE
Confidence 322222112345689999976 4899999 6899999999999999999999999 679999999999
Q ss_pred ecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 388 RSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 388 ~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 418 ~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~ 462 (539)
T 1mdb_A 418 TRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVS 462 (539)
T ss_dssp CTTSCEEEEEEGGGCEECSSCEECHHHHHHHHTTSTTEEEEEEEE
T ss_pred CCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 999987 3 999999999999999999999999999985
No 9
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=5.8e-63 Score=492.50 Aligned_cols=394 Identities=23% Similarity=0.283 Sum_probs=322.9
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+
T Consensus 106 ~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~ 185 (652)
T 1pg4_A 106 KHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVIT 185 (652)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEE
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchH---------HHh----cC---CCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEE
Q 014435 103 VPELWD---------KVK----DL---NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 166 (424)
Q Consensus 103 ~~~~~~---------~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (424)
+++... .+. .. ....++.......... ........+++++.... ...+.....++|+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~ 260 (652)
T 1pg4_A 186 ADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDID---WQEGRDLWWRDLIEKAS--PEHQPEAMNAEDPLF 260 (652)
T ss_dssp ESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCC---CCBTTEEEHHHHHTTSC--SCCCCCCEETTSEEE
T ss_pred cCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCccc---ccCCCceeHHHHHhhcC--CCCCccccCCCCCEE
Confidence 876432 111 11 1122222211100000 00112234566554322 222334456899999
Q ss_pred EecCCCCCCCcchhhhcHHHHHHHHHH-HHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CC
Q 014435 167 LLYSSGTTGVSKGVILTHKNFIAASLM-ISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FD 241 (424)
Q Consensus 167 i~~TSGtTG~pK~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~ 241 (424)
|+|||||||.||+|+++|+++...... ....... ..++++++.+|++|..|+...++.+|..|+++++.+. ++
T Consensus 261 ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~ 338 (652)
T 1pg4_A 261 ILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDY--HPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPT 338 (652)
T ss_dssp EEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTC--CTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSS
T ss_pred EEeccCCCCCCceEEECchHHHHHHHHHHHHhcCC--CCCCEEEEccCCeeeechHHHHHHHHHcCceEEEECCCCCCCC
Confidence 999999999999999999998765432 2223333 3449999999999999986678899999999999864 58
Q ss_pred HHHHHHHHHHccceEEEechHHHHHHHhccc--cccCCCCCeeEEEecCCCCCHHHHHHHHHhCC--CCeEEecccCccC
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIP--GATIFQGYGMTET 317 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~yG~tE~ 317 (424)
+..+++.++++++|+++++|++++.|.+... ....++++||.+++||+++++++++++.+.++ ++++++.||+||+
T Consensus 339 ~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~ 418 (652)
T 1pg4_A 339 PARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTET 418 (652)
T ss_dssp TTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGG
T ss_pred HHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCCCCHHHHHHHHHHhCCCCCcEEccccCccc
Confidence 9999999999999999999999999998754 23457899999999999999999999999884 2899999999999
Q ss_pred CCceeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEec--CCcchhh---------------hhccc
Q 014435 318 CAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG--PNVTPVF---------------ELTVN 380 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gy---------------~~~~~ 380 (424)
++.++...+.....+.+++|+|++|++++|+| +++++++.|+.|||+++| |.++.|| ++||+
T Consensus 419 ~~~~~~~~~~~~~~~~~s~G~p~~g~~v~i~d-~~g~~v~~g~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~y~ 497 (652)
T 1pg4_A 419 GGFMITPLPGAIELKAGSATRPFFGVQPALVD-NEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYF 497 (652)
T ss_dssp SSCSBCCCTTTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEE
T ss_pred ccceecCCCCCcCccCCccccCcCCCeEEEEC-CCCCCcCCCceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCEEE
Confidence 87666554433345678999999999999999 689999999999999999 6788887 46899
Q ss_pred cCceEEEecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 381 CNLFSYFRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 381 TgD~g~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|||+|++++||.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 498 TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~~p~V~ea~Vvg 549 (652)
T 1pg4_A 498 SGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVG 549 (652)
T ss_dssp EEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTEEEEEEEE
T ss_pred CCcEEEEcCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCCcceEEEEE
Confidence 9999999999987 3 999999999999999999999999999985
No 10
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=8.3e-64 Score=489.55 Aligned_cols=394 Identities=22% Similarity=0.274 Sum_probs=295.2
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. .++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++
T Consensus 44 p~~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l 123 (544)
T 3o83_A 44 PHSLAIICGERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVVLNALYSHRQYELNAFI 123 (544)
T ss_dssp TTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHH
T ss_pred CCceEEEcCCCceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEecCCCCCCHHHHHHHH
Confidence 3444443 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccch--------HHHhcCC--CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCC
Q 014435 93 KDSNPKLVITVPELW--------DKVKDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQT 162 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (424)
+.++++++|++++.. ..+.... ...+...... .....+.++...... ...+.....++
T Consensus 124 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~ 191 (544)
T 3o83_A 124 KQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQ-----------ATDFGLLDWIETPAE-TFVDFSSTPAD 191 (544)
T ss_dssp HHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCC-----------TTSEEHHHHHHSCCS-SCCCCCCCCTT
T ss_pred HhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCC-----------ccccchhhhhhcccc-cccccccCCcc
Confidence 999999999987653 1122111 1222222111 011122333322221 11222345689
Q ss_pred CEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHH-HHHHHhhcCceEEecCCCC
Q 014435 163 DAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMGKFD 241 (424)
Q Consensus 163 ~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~ 241 (424)
++++++|||||||.||+|+++|+++...+.......... .++++++.+|++|.+++.. .++.++..|+++++.+.++
T Consensus 192 d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~--~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~~~~ 269 (544)
T 3o83_A 192 EVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLN--SNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAPNPE 269 (544)
T ss_dssp SEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCC--TTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSSCC
T ss_pred ceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCC--CCCeEEEecCcceEeecchHHHHHHHHcCCEEEECCCCC
Confidence 999999999999999999999999998887776665543 4499999999999999864 4788999999999999999
Q ss_pred HHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCce
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPI 321 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~ 321 (424)
+..+++.++++++|++.++|+++..+++.......++++||.+++||+++++++.+++.+.+ ++++++.||+||++..+
T Consensus 270 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~ 348 (544)
T 3o83_A 270 PLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGASFPESLARQVPEVL-NCKLQQVFGMAEGLVNY 348 (544)
T ss_dssp HHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSCCCHHHHTHHHHHH-CSEEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEeeecccccccee
Confidence 99999999999999999999999999987766666789999999999999999999999988 79999999999987443
Q ss_pred eecCCCCCccCCCcccccc-CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEE
Q 014435 322 SLENPLVGVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYF 387 (424)
Q Consensus 322 ~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~ 387 (424)
... .........++|+|+ ++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|++
T Consensus 349 ~~~-~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~ 426 (544)
T 3o83_A 349 TRL-DDSDEQIFTTQGRPISSDDEIKIVD-EQYREVPEGEIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGDLVQR 426 (544)
T ss_dssp CCT-TSCHHHHHHCCCEESCTTCEEEEEC-TTSCBCCTTCCEEEEEECTTSCSCCTTCHHHHHHHBCTTCCEEEEEEEEE
T ss_pred ecC-CCchhhccCCCceecCCCcEEEEEC-CCCCCCCCCCeeEEEEecCCcchhhcCChhhhhhhCCCCCCeEcCCEEEE
Confidence 332 222233456899996 899999999 7999999999999999999999999 679999999999
Q ss_pred ecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 388 RSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 388 ~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 427 ~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~ 471 (544)
T 3o83_A 427 TPDGNLRVVGRIKDQINRGGEKIASEEIEKLILLHPEVMHAALVA 471 (544)
T ss_dssp CTTSCEEEEEEEC--------------------------------
T ss_pred cCCCCEEEEeecCCEEEeCCEEECHHHHHHHHHhCCCccEEEEEe
Confidence 999987 3 999999999999999999999999999985
No 11
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=2.1e-63 Score=486.33 Aligned_cols=385 Identities=22% Similarity=0.328 Sum_probs=308.5
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|
T Consensus 45 ~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi 124 (541)
T 1v25_A 45 VHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLL 124 (541)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEE
T ss_pred CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhCCCcEEE
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCC-----CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++++....+.... ...++...... ......+++++.... . .....++++++|+|||||||.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~--~---~~~~~~~~~a~i~~TSGTTG~ 190 (541)
T 1v25_A 125 FDPNLLPLVEAIRGELKTVQHFVVMDEKA---------PEGYLAYEEALGEEA--D---PVRVPERAACGMAYTTGTTGL 190 (541)
T ss_dssp ECGGGHHHHHHHGGGCSSCCEEEESSSCC---------CTTCEEHHHHCCSCC--C---CCCCCTTSEEEEEEECSSSSS
T ss_pred EChhHHHHHHHHHhhCCCccEEEEecCCC---------CcccccHHHHhhccC--C---cccCCCCCcEEEEECCCCCCC
Confidence 9988766554321 11222211100 012234454443222 1 134457899999999999999
Q ss_pred cchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccce
Q 014435 177 SKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVT 255 (424)
Q Consensus 177 pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t 255 (424)
||+|.++|+++.................++++++.+|++|.+++. ..+.++..|+++++.+. +++..+++.++++++|
T Consensus 191 PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t 269 (541)
T 1v25_A 191 PKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWC-LPYAATLVGAKQVLPGPRLDPASLVELFDGEGVT 269 (541)
T ss_dssp CEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHT-HHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCC
T ss_pred CcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHHH-HHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCee
Confidence 999999999988765442211222234459999999999999984 56788999999999864 7999999999999999
Q ss_pred EEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC------
Q 014435 256 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG------ 329 (424)
Q Consensus 256 ~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~------ 329 (424)
+++++|+++..|.+.......+++++|.+++||+++++++.+++ +.+ ++++++.||+||++++++.......
T Consensus 270 ~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~-~~~-g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~ 347 (541)
T 1v25_A 270 FTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARF-ERM-GVEVRQGYGLTETSPVVVQNFVKSHLESLSE 347 (541)
T ss_dssp EEEECHHHHHHHHHHHHHHTCCCSSCCEEEECSSCCCHHHHHHH-HHT-TCEEEEEEECGGGSSEEEECCCCGGGTTSCH
T ss_pred EEecchHHHHHHHhhhhccCCcchhccEEEECCCCCCHHHHHHH-HHh-CCceeecccccccccceecccccccccccCc
Confidence 99999999999988766555678999999999999999999999 556 7999999999999877665433210
Q ss_pred ---ccCCCccccccCCcEEEEeeCCCCccCCC--CCceeEEEecCCcchhh-------------hhccccCceEEEecCC
Q 014435 330 ---VRRSGSAGTLVAGVEAQIVSVDTLKPLPP--NQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSND 391 (424)
Q Consensus 330 ---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g 391 (424)
....+++|+|+++++++|+| +++++++. ++.|||+++|+.++.|| ++||+|||+|+++++|
T Consensus 348 ~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDlg~~d~dG 426 (541)
T 1v25_A 348 EEKLTLKAKTGLPIPLVRLRVAD-EEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEEG 426 (541)
T ss_dssp HHHHHHHTSCBEECTTCEEEEEC-TTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTTC
T ss_pred cccccccCCCCCcCCCcEEEEEC-CCCCCCCCCCCcceEEEEeCcchhccccCChhhhhhhccCCCCeEcCCEEEEcCCc
Confidence 12357899999999999999 68888884 36899999999999999 6799999999999999
Q ss_pred ce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 392 HN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 392 ~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 427 ~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~ 467 (541)
T 1v25_A 427 YVEIKDRLKDLIKSGGEWISSVDLENALMGHPKVKEAAVVA 467 (541)
T ss_dssp CEEEEEESSCEEEETTEEEEHHHHHCC----------CEEE
T ss_pred eEEEeecccceeeeCCEEECHHHHHHHHHhCCCceEEEEEE
Confidence 87 3 999999999999999999999999999984
No 12
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=8.2e-63 Score=484.29 Aligned_cols=382 Identities=19% Similarity=0.259 Sum_probs=319.4
Q ss_pred CCCcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~-gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
+++||+||.++++++|++|++. |+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|
T Consensus 72 ~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi 151 (570)
T 3c5e_A 72 LMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIV 151 (570)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEE
T ss_pred eEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEE
Confidence 5799999999999999999998 999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHhcCC-----CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCC
Q 014435 102 TVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGV 176 (424)
Q Consensus 102 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 176 (424)
++++....+.... .+.++..... .......+++++.... ...+.....++|+++|+|||||||.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~ 220 (570)
T 3c5e_A 152 AGDEVIQEVDTVASECPSLRIKLLVSEK---------SCDGWLNFKKLLNEAS--TTHHCVETGSQEASAIYFTSGTSGL 220 (570)
T ss_dssp EETTTHHHHHHHGGGCTTCCEEEEESSS---------CCTTSEEHHHHHHHSC--SCCCCCCCBTTSEEEEEECCCSSSS
T ss_pred echHHHHHHHHHhhcCCceeEEEEeccc---------CccccccHHHHhhccc--ccccccCCCCCCcEEEEECCCCCCC
Confidence 9988766554321 1122222110 0112334555554332 2222234568999999999999999
Q ss_pred cchhhhcHHHHHH--HHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC--CCCHHHHHHHHHHc
Q 014435 177 SKGVILTHKNFIA--ASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG--KFDIEMALRAIEKY 252 (424)
Q Consensus 177 pK~v~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~ 252 (424)
||+|.++|+ ++. ..... .. .....++++++.+|++|.+++...++.++..|+++++.+ .+++..+++.++++
T Consensus 221 PKgV~~sh~-~~~~~~~~~~-~~--~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~ 296 (570)
T 3c5e_A 221 PKMAEHSYS-SLGLKAKMDA-GW--TGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSY 296 (570)
T ss_dssp CCEEEEEHH-HHHHHHHHHT-TT--TSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHS
T ss_pred CCEEEechH-HHHhhhhhhh-hh--cCCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHh
Confidence 999999999 444 22222 22 222345899999999999998767888899999999886 68999999999999
Q ss_pred cceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccC
Q 014435 253 RVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRR 332 (424)
Q Consensus 253 ~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~ 332 (424)
++|+++++|+++..|.+.. ....+++++|.+++||+++++++.++|.+.+ ++++++.||+||++..++..... ...
T Consensus 297 ~~t~~~~~P~~~~~l~~~~-~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~~~~--~~~ 372 (570)
T 3c5e_A 297 PIKSMMGAPIVYRMLLQQD-LSSYKFPHLQNCVTVGESLLPETLENWRAQT-GLDIRESYGQTETGLTCMVSKTM--KIK 372 (570)
T ss_dssp CCCEEEECHHHHHHHHTSC-TTTCCCTTCCEEEEESSCCCHHHHHHHHHHH-SCCCEEEEEETTTEEEEECCTTS--CCC
T ss_pred CCeEEeccHHHHHHHHhcc-ccccccccceEEEEcCCcCCHHHHHHHHHHh-CCchhhccchhhcccceecCccc--ccC
Confidence 9999999999999998763 3344688999999999999999999999988 69999999999998655543322 456
Q ss_pred CCccccccCCcEEEEeeCCCCccCCCCCceeEEEe-----cCCcchhh------------hhccccCceEEEecCCce--
Q 014435 333 SGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVR-----GPNVTPVF------------ELTVNCNLFSYFRSNDHN-- 393 (424)
Q Consensus 333 ~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~-----~~~~~~gy------------~~~~~TgD~g~~~~~g~~-- 393 (424)
.+++|+|+++++++|+| +++++++.|+.|||+++ |+.++.|| ++||+|||+|++++||.+
T Consensus 373 ~~~vG~p~~~~~v~i~d-~~g~~~~~G~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~~~~~~TGDlg~~d~dG~l~~ 451 (570)
T 3c5e_A 373 PGYMGTAASCYDVQIID-DKGNVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWLLGDRGIKDEDGYFQF 451 (570)
T ss_dssp TTCCCEECTTCCEEEEC-TTSCBCCTTCCEEEEEECSSBCCTTCCCEETTCHHHHHHTEETTEEEEEEEEEECTTSCEEE
T ss_pred CCcccccCCCceEEEEC-CCCCCCCCCCCCeeEEeccCCCCchhhccccCChhHhhhhhcCCccccceeEEEcCCceEEE
Confidence 78999999999999999 68999999999999999 99999999 589999999999999987
Q ss_pred -----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 452 ~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~a~Vv~ 488 (570)
T 3c5e_A 452 MGRADDIINSSGYRIGPSEVENALMEHPAVVETAVIS 488 (570)
T ss_dssp EEEGGGCEEETTEEECHHHHHHHHHTSTTEEEEEEEE
T ss_pred EecCCCEEEECCEEECHHHHHHHHHhCCCcceEEEEe
Confidence 3 999999999999999999999999999985
No 13
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=9e-63 Score=478.27 Aligned_cols=376 Identities=21% Similarity=0.272 Sum_probs=312.5
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
.+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++++++++++
T Consensus 27 ~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 106 (504)
T 1t5h_X 27 GLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAV 106 (504)
T ss_dssp TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHTTCSEEE
T ss_pred CceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCccChHHHHHHHhhcCCcEEE
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred E--cccchHHH-hcCCCCeEEEecCCCccccccccCCCcccchhhhhhccC---CCCCCCCCCCCCCCEEEEecCCCCCC
Q 014435 102 T--VPELWDKV-KDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG---SVTDIPDVSVKQTDAAALLYSSGTTG 175 (424)
Q Consensus 102 ~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~TSGtTG 175 (424)
+ +++....+ ..... ..+ ..++++..... .....+.....++++++++|||||||
T Consensus 107 ~~~~~~~~~~~~~~~~~-~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG 166 (504)
T 1t5h_X 107 IAVGRQVADAIFQSGSG-ARI-------------------IFLGDLVRDGEPYSYGPPIEDPQREPAQPAFIFYTSGTTG 166 (504)
T ss_dssp ECC--CHHHHHHHHCCC-CEE-------------------EEGGGTEETTEECCCSCCCCCCCCCTTSEEEEEECCC---
T ss_pred Eecchhhhhhhhhcccc-cee-------------------EEecchhhcCcccccCCccCCCCCCCCCeEEEEeCCCCCC
Confidence 9 76655444 32211 111 12222222110 00111123456799999999999999
Q ss_pred CcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccce
Q 014435 176 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVT 255 (424)
Q Consensus 176 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 255 (424)
.||+|.++|+++.................++++++.+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|
T Consensus 167 ~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t 246 (504)
T 1t5h_X 167 LPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVT 246 (504)
T ss_dssp CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCC
T ss_pred CCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCceEEeCCCCCHHHHHHHHHHhCCe
Confidence 99999999999988877665554442245599999999999999865688999999999999999999999999999999
Q ss_pred EEEechHHHHHHHhcccc--ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCC
Q 014435 256 VWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRS 333 (424)
Q Consensus 256 ~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~ 333 (424)
+++++|+++..|.+.... ...++++||.+++||+++++++.+++++.+ +.++++.||+||++ .+.... ....
T Consensus 247 ~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~-~~~~~~----~~~~ 320 (504)
T 1t5h_X 247 SLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHL-PGEKVNIYGTTEAM-NSLYMR----QPKT 320 (504)
T ss_dssp EEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHHHC-CSEEEEEEEETTTE-EEEEEE----SCSS
T ss_pred EEEeChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHHhc-Ccceeeeecccccc-cccccc----CCCC
Confidence 999999999999876522 345689999999999999999999999999 58999999999983 232221 2456
Q ss_pred CccccccCCcEEEEeeCCCC---ccCCCCCceeEEEe-cCCcchhh------------hhccccCceEEEecCCce----
Q 014435 334 GSAGTLVAGVEAQIVSVDTL---KPLPPNQLGEIWVR-GPNVTPVF------------ELTVNCNLFSYFRSNDHN---- 393 (424)
Q Consensus 334 ~~~G~~~~~~~~~i~d~~~~---~~~~~g~~Gel~v~-~~~~~~gy------------~~~~~TgD~g~~~~~g~~---- 393 (424)
+++|.|.++++++|+| +++ ++++.|+.|||+++ |+.++.|| ++||+|||+|++++||.+
T Consensus 321 ~~~g~p~~~~~~~i~~-~~~~~~~~~~~g~~GEl~v~gg~~~~~GY~~~~~~t~~~f~~g~~~TGDlg~~~~dG~l~~~G 399 (504)
T 1t5h_X 321 GTEMAPGFFSEVRIVR-IGGGVDEIVANGEEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRTSDVAVWTPEGTVRILG 399 (504)
T ss_dssp SSEEBCCTTCCEEEEC-TTSCTTCBCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEETTEEEEEEEEEECTTSCEEEEE
T ss_pred CccccCCCCCceeEEe-ccCCCCCcCCCCCcceEEEeCCceeeceecCCchhhhhhhcCCccccCcEEEECCCceEEEeC
Confidence 7899999999999999 455 89999999999999 99999999 579999999999999987
Q ss_pred ---e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ---D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ---d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 400 R~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~ 434 (504)
T 1t5h_X 400 RVDDMIISGGENIHPSEIERVLGTAPGVTEVVVIG 434 (504)
T ss_dssp EGGGCEEETTEEECHHHHHHHHTTSTTEEEEEEEE
T ss_pred cccCEEEECCEEECHHHHHHHHHhCCCcceEEEEE
Confidence 3 999999999999999999999999999985
No 14
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=8.9e-63 Score=481.36 Aligned_cols=396 Identities=21% Similarity=0.320 Sum_probs=313.8
Q ss_pred cCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLVL-PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
+++.++.. .+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++
T Consensus 37 p~~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l 116 (529)
T 2v7b_A 37 AGKTAYIDDTGSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPADYVYML 116 (529)
T ss_dssp TTSEEEECSSCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHH
T ss_pred CCceEEEeCCCCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCceEEecCcccCHHHHHHHH
Confidence 44444432 45799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCC-----C-CeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEE
Q 014435 93 KDSNPKLVITVPELWDKVKDLN-----L-PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 166 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (424)
++++++++|++++....+.... . ..++...... ........++++..... ...+.....++|+++
T Consensus 117 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~ 187 (529)
T 2v7b_A 117 THSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRE-------SEPRLAPLFEELIDAAA--PAAKAAATGCDDIAF 187 (529)
T ss_dssp HHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC-------------CCCBHHHHHHTSC--CCSSCCCCCTTSEEE
T ss_pred hccCCeEEEechhhhhHHHHHHhhccccCceEEEecccc-------cccccccchhhhhccCC--CcccccCCCCCCeEE
Confidence 9999999999987765543321 1 2222211100 00001123455443222 122233456899999
Q ss_pred EecCCCCCCCcchhhhcHHHH-HHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec-CCCCHHH
Q 014435 167 LLYSSGTTGVSKGVILTHKNF-IAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEM 244 (424)
Q Consensus 167 i~~TSGtTG~pK~v~~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~ 244 (424)
++|||||||.||+|.++|+++ ............ ...++++++.+|++|.+|+...++.++..|+++++. +.+++..
T Consensus 188 i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~--~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~ 265 (529)
T 2v7b_A 188 WLYSSGSTGKPKGTVHTHANLYWTAELYAKPILG--IAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILMAERPTADA 265 (529)
T ss_dssp EEEC-----CCCEEEEEHHHHHHHHHHTCCCCCC--CCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEECCCSCCCHHH
T ss_pred EEECCCCCCCCceEEEEhhHHHHHHHHHhhhccC--CCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEEecCCCCHHH
Confidence 999999999999999999998 444332222222 234599999999999999976678899999999987 5689999
Q ss_pred HHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeec
Q 014435 245 ALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLE 324 (424)
Q Consensus 245 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~ 324 (424)
+++.++++++|+++++|+++..+++..........++|.+++||+++++++.+++.+.+ ++++++.||+||++++.+..
T Consensus 266 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~ 344 (529)
T 2v7b_A 266 IFARLVEHRPTVFYGVPTLYANMLVSPNLPARADVAIRICTSAGEALPREIGERFTAHF-GCEILDGIGSTEMLHIFLSN 344 (529)
T ss_dssp HHHHHHHSCCSEEEECHHHHHHHHTCTTCCCGGGCCCCEEEECSSCCCHHHHHHHHHHH-SCCEEEEEECTTTSSEEEEC
T ss_pred HHHHHHHhCCEEEEecHHHHHHHHhCcccccccCCceEEEEEcCCCCCHHHHHHHHHHh-CCceeeeEchhhcCceeecc
Confidence 99999999999999999999999876543332124899999999999999999999988 79999999999997766554
Q ss_pred CCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCc
Q 014435 325 NPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDH 392 (424)
Q Consensus 325 ~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~ 392 (424)
... ....+++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.
T Consensus 345 ~~~--~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~~~~~TGDl~~~~~~G~ 421 (529)
T 2v7b_A 345 RAG--AVEYGTTGRPVPGYEIELRD-EAGHAVPDGEVGDLYIKGPSAAVMYWNNREKSRATFLGEWIRSGDKYCRLPNGC 421 (529)
T ss_dssp CTT--CCCTTSCCEECTTCEEEEEC-TTSCBCCTTSCEEEEEECTTCCCCBTTCHHHHHHHEETTEEEEEEEEEECTTSC
T ss_pred ccC--CCccCCcccCCCCCEEEEEC-CCCCCCCCCCccEEEEecCCcccccCCChHHHHHhhhcCCcccCceEEECCCcc
Confidence 433 35678999999999999999 7899999999999999999999999 57999999999999998
Q ss_pred e-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 393 N-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 393 ~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 422 l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~vv~ 461 (529)
T 2v7b_A 422 YVYAGRSDDMLKVSGQYVSPVEVEMVLVQHDAVLEAAVVG 461 (529)
T ss_dssp EEEEEEGGGCBC----CBCHHHHHHHHTTSTTEEEEEEEE
T ss_pred EEEeCccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEE
Confidence 7 3 999999999999999999999999999985
No 15
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=4e-63 Score=481.90 Aligned_cols=386 Identities=18% Similarity=0.223 Sum_probs=319.8
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++.+++. ..+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++
T Consensus 15 p~~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~vpl~~~~~~~~l~~il 94 (512)
T 3fce_A 15 PDQTAFVWRDAKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYIPVDLSIPADRVQRIA 94 (512)
T ss_dssp TTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCEEEEETTSCHHHHHHHH
T ss_pred CCceEEEeCCceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEeeCCCCcHHHHHHHH
Confidence 3344443 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+.+++++++++....... ....... ...+.+...........+.....++|+++++||||
T Consensus 95 ~~~~~~~~i~~~~~~~~~----~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSG 154 (512)
T 3fce_A 95 ENSGAKLLLSATAVTVTD----LPVRIVS----------------EDNLKDIFFTHKGNTPNPEHAVKGDENFYIIYTSG 154 (512)
T ss_dssp HHSCCCEEEESSCCCSSC----CSSEEEE----------------THHHHHHHHHTTTCCCCGGGSCCTTSEEEEEEECC
T ss_pred HhcCCCEEEecCcccccc----cccceec----------------hhhhhhhcccccccCCCccccCCCCCeEEEEECCC
Confidence 999999999975432110 0011100 01122222211211222334567899999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i 249 (424)
|||.||+|+++|+++.............. .++++++.+|++|..++. .++.++..|+++++.+. +++..+++.+
T Consensus 155 TTG~PKgv~~th~~l~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i 231 (512)
T 3fce_A 155 STGNPKGVQITYNCLVSFTKWAVEDFNLQ--TGQVFLNQAPFSFDLSVM-DIYPSLVTGGTLWAIDKDMIARPKDLFASL 231 (512)
T ss_dssp ----CEEEEEEHHHHHHHHHHHHHHTTCC--SSCEEEECSCTTSGGGHH-HHHHHHHTTCEEEECCHHHHHSHHHHHHHH
T ss_pred CCCCCceEEEehHHHHHHHHHHHHhcCCC--CCCEEEEeCCccHhHHHH-HHHHHHhCCCEEEECCHHHhhCHHHHHHHH
Confidence 99999999999999998877766655543 449999999999999985 68899999999999876 6899999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++++|++.++|+++..++.........++++|.+++||+++++++.+++.+.++++++++.||+||+++.++.......
T Consensus 232 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~ 311 (512)
T 3fce_A 232 EQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVAVTGIHVTEE 311 (512)
T ss_dssp HHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEECCHH
T ss_pred HHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhhhheeeEEeccc
Confidence 99999999999999999988877677778999999999999999999999999988999999999999876665332211
Q ss_pred ---ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh----------------hhccccCceEEEecC
Q 014435 330 ---VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF----------------ELTVNCNLFSYFRSN 390 (424)
Q Consensus 330 ---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy----------------~~~~~TgD~g~~~~~ 390 (424)
.....++|+|.++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|++ +|
T Consensus 312 ~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~-~d 389 (512)
T 3fce_A 312 VLDQYKSLPVGYCKSDCRLLIMK-EDGTIAPDGEKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDAGYV-EN 389 (512)
T ss_dssp HHHHCSSCCCEEECTTCEEEEEC-SSSCBCCTTSCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEE-ET
T ss_pred cccccCCCccccccCCcEEEEEC-CCCCCCCCCCeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCceEEe-cC
Confidence 23567899999999999999 7999999999999999999999999 349999999999 78
Q ss_pred Cce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 391 DHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 391 g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 390 G~l~i~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~ 431 (512)
T 3fce_A 390 GLLFYNGRLDFQIKLHGYRMELEEIEHHLRACSYVEGAVIVP 431 (512)
T ss_dssp TEEEEEEEGGGCEEETTEEECHHHHHHHHHHSTTEEEEEEEE
T ss_pred CEEEEecccCCEEEECCEEECHHHHHHHHHhCCCcceEEEEE
Confidence 877 3 999999999999999999999999999984
No 16
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=3.8e-62 Score=486.75 Aligned_cols=397 Identities=21% Similarity=0.264 Sum_probs=322.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 22 PSDPSFSMFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~-~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
.+++||+||.++++++|+.|+ ++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++
T Consensus 111 ~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 190 (663)
T 1ry2_A 111 GYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVV 190 (663)
T ss_dssp CEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEE
T ss_pred eEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEE
Confidence 456999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccchH---------HHhcC----C-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEE
Q 014435 101 ITVPELWD---------KVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 166 (424)
Q Consensus 101 i~~~~~~~---------~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (424)
|+++.... .+... . .+.+++.......... ........+++++.... ...+.....++|+++
T Consensus 191 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~ 266 (663)
T 1ry2_A 191 ITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVA--FHAPRDLDWATEKKKYK--TYYPCTPVDSEDPLF 266 (663)
T ss_dssp EEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCC--CCSSSEEEHHHHHTTSC--SCCCCCCEETTSCCE
T ss_pred EEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCccc--cCCCccccHHHHHhhcC--CCCCccccCCCCceE
Confidence 99876532 11111 1 1223322211000000 00112234555554322 222334556899999
Q ss_pred EecCCCCCCCcchhhhcHHHHHHHHHHH-HhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CC
Q 014435 167 LLYSSGTTGVSKGVILTHKNFIAASLMI-SAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FD 241 (424)
Q Consensus 167 i~~TSGtTG~pK~v~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~ 241 (424)
|+|||||||.||+|+++|+++....... ...... ..++++++..|++|..|+...++.+|..|+++++.+. ++
T Consensus 267 ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~ 344 (663)
T 1ry2_A 267 LLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDT--HQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPN 344 (663)
T ss_dssp EEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCC--CSSCEEEECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSC
T ss_pred EEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCC--CCCcEEEEcCCcHHhhhhHHHHHHHHHhCCEEEEECCCCCCCC
Confidence 9999999999999999999987654332 222223 3459999999999999986678899999999998864 58
Q ss_pred HHHHHHHHHHccceEEEechHHHHHHHhccc--cccCCCCCeeEEEecCCCCCHHHHHHHHHhCC--CCeEEecccCccC
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIP--GATIFQGYGMTET 317 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~yG~tE~ 317 (424)
+..+++.|+++++|+++++|++++.|.+... ....++++||.+++||+++++++++++.+.++ ++++++.||+||+
T Consensus 345 ~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~ 424 (663)
T 1ry2_A 345 YSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTES 424 (663)
T ss_dssp TTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEEECBCCTTT
T ss_pred HHHHHHHHHHcCCCEEEecHHHHHHHHhcCccccccCCcCceEEEEEEcCCCCHHHHHHHHHHhCCCCceEEEeECCccc
Confidence 8999999999999999999999999987654 23457899999999999999999999999884 3899999999999
Q ss_pred CCceeecCC-CCCccCCCccccccCCcEEEEeeCCCCccCCC-CCceeEEEec--CCcchhh---------------hhc
Q 014435 318 CAPISLENP-LVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPP-NQLGEIWVRG--PNVTPVF---------------ELT 378 (424)
Q Consensus 318 ~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~-g~~Gel~v~~--~~~~~gy---------------~~~ 378 (424)
++.++...+ .....+.+++|+|++|++++|+|++++++++. |+.|||+++| |.++.|| ++|
T Consensus 425 ~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~v~~~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g~ 504 (663)
T 1ry2_A 425 GSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGY 504 (663)
T ss_dssp CSCSEECCTTTCCCCCTTCCCEECTTCCEEEECSSSTTCEECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTS
T ss_pred cCeeeccCCCCCcccCCCccccCcCCCeEEEEcCCCCCcCCCCCcceEEEEecCCCchhcccccChHHHHHhhhcCCCCE
Confidence 876666543 22245678999999999999999558999988 9999999999 4788887 468
Q ss_pred cccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 379 VNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 379 ~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|+|||+|++++||.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 505 y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~~p~V~ea~Vvg 558 (663)
T 1ry2_A 505 YFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIVAECAVVG 558 (663)
T ss_dssp EEEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHHHHHHHHSSTTEEEEEEEC
T ss_pred EEcCCEEEEcCCCCEEEEeecCCEEEECCEEcCHHHHHHHHHhCCCcceEEEEE
Confidence 999999999999987 3 999999999999999999999999999986
No 17
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=1.8e-62 Score=511.00 Aligned_cols=407 Identities=38% Similarity=0.570 Sum_probs=309.1
Q ss_pred cCCCCCCC---CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 14 SLRPPLVL---PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 14 ~~~~~~~~---~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
++++++.. .++|||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.+
T Consensus 75 pd~~Al~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~ 154 (979)
T 3tsy_A 75 ATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAK 154 (979)
T ss_dssp TTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHH
T ss_pred CCCeEEEECCCCcEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHH
Confidence 44444433 456999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEEEcccchHHHhcCC--CCeEEEecCCCccccccccCCCcccchhhhhhccCCC-CCCCCCCCCCCCEEEE
Q 014435 91 QVKDSNPKLVITVPELWDKVKDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV-TDIPDVSVKQTDAAAL 167 (424)
Q Consensus 91 ~l~~~~~~~ii~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 167 (424)
++++++++++|++++....+.... ....++..+.... .........+.++....... ...+.....++|+++|
T Consensus 155 ~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i 230 (979)
T 3tsy_A 155 QAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNES----VPIPEGCLRFTELTQSTTEASEVIDSVEISPDDVVAL 230 (979)
T ss_dssp HHHHHTEEEEEECSTTTTTSHHHHHTSCCEEEECCCCTT----SCCCTTEEEGGGTSSCCSGGGGGSCCSCCCTTSEEEC
T ss_pred HHHHcCCeEEEEChHHHHHHHHHhhcCCceEEEeCCccc----ccCCcccccHHHHhhccccccccCCcCCCCccceEEE
Confidence 999999999999987665544321 1112222221100 01112234455444322210 1223345678999999
Q ss_pred ecCCCCCCCcchhhhcHHHHHHHHHHHHhhh--hhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHH
Q 014435 168 LYSSGTTGVSKGVILTHKNFIAASLMISAHQ--ELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMA 245 (424)
Q Consensus 168 ~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 245 (424)
+|||||||.||+|+++|+++...+....... .+....++++++.+|++|.+++...++.++..|+++++.+.+++..+
T Consensus 231 ~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~ 310 (979)
T 3tsy_A 231 PYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLL 310 (979)
T ss_dssp CBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECSSCCHHHH
T ss_pred EeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeCCCCHHHH
Confidence 9999999999999999999988765543221 12233459999999999999997678899999999999999999999
Q ss_pred HHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecC
Q 014435 246 LRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLEN 325 (424)
Q Consensus 246 ~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~ 325 (424)
++.++++++|++.++|+++..|.+.......++++||.+++||+++++++.+++.+.++++++++.||+||++++++...
T Consensus 311 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~ 390 (979)
T 3tsy_A 311 LELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSL 390 (979)
T ss_dssp HHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCCTTCCEEEESSCCCCSSHHHHHHHHCTTCEEEECEECGGGCSEEEECG
T ss_pred HHHHHHhCCeEEEcHHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHCCCCeEEeeechhhhhHHHHhCC
Confidence 99999999999999999999999988777778999999999999999999999999998899999999999987665532
Q ss_pred ---CCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceEEEec
Q 014435 326 ---PLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRS 389 (424)
Q Consensus 326 ---~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~ 389 (424)
........+++|+|+++++++|+|++++++++.|+.|||+|+|+.++.|| ++||+|||+|++++
T Consensus 391 ~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl~~~~~ 470 (979)
T 3tsy_A 391 GFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDD 470 (979)
T ss_dssp GGSSSCCCCCTTCCCEECSSCEEEEECTTSCCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECT
T ss_pred CCCCCccccCCCCcCcccCCcEEEEEeCCCCCCCCCCCccEEEEECCCccccccCChhhhhhhccCCCcEEcCCEEEEcC
Confidence 12224567889999999999999988899999999999999999999999 67999999999999
Q ss_pred CCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 390 NDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 390 ~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
||.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 471 dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~p~V~~~~Vv~ 513 (979)
T 3tsy_A 471 DDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVA 513 (979)
T ss_dssp TSCEEEEEESCC-------------------------------
T ss_pred CceEEEecCCCCEEEECCEEECHHHHHHHHHhCCCcceEEEEE
Confidence 9987 3 999999999999999999999999999985
No 18
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=1.3e-62 Score=479.64 Aligned_cols=385 Identities=17% Similarity=0.216 Sum_probs=315.3
Q ss_pred CCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHH
Q 014435 15 LRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVK 93 (424)
Q Consensus 15 ~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~ 93 (424)
+.+++. ..+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++
T Consensus 19 ~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~ 98 (521)
T 3l8c_A 19 DFPVYDCLGERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAYIPVDVHSAPERILAIIE 98 (521)
T ss_dssp TSEEEEETTEEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHH
T ss_pred CCcceecCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccccHHHHHHHHH
Confidence 344443 3456999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhcc-CCCCCCCCCCCCCCCEEEEecCCC
Q 014435 94 DSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELS-GSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 94 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
.++++++|++++....+... ....+.++.... ............++|+++++||||
T Consensus 99 ~~~~~~ii~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSG 155 (521)
T 3l8c_A 99 IAKPSLIIAIEEFPLTIEGI-----------------------SLVSLSEIESAKLAEMPYERTHSVKGDDNYYIIFTSG 155 (521)
T ss_dssp HSCCSEEEESSCCCSCCTTS-----------------------EEEEHHHHHHHHHHTCCCCCSSCCCTTSEEEEEECCC
T ss_pred hCCCCEEEecCccccccccC-----------------------cccchhhhhhcccccCCcccCCCCCCCCcEEEEEcCC
Confidence 99999999987653222111 111122221110 011222334557899999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCC---CHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKF---DIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~i 249 (424)
|||.||+|+++|+++............+....+++++...|++|..++. .++.++..|+++++.+.. ++..+++.+
T Consensus 156 TTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i 234 (521)
T 3l8c_A 156 TTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSVM-YWAPTLALGGTLFALPKELVADFKQLFTTI 234 (521)
T ss_dssp ---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGHH-HHHHHHHTTCEEEECCGGGTTCHHHHHHHH
T ss_pred CCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHHH-HHHHHHhcCCEEEEcCHHHhhCHHHHHHHH
Confidence 9999999999999998876665544334444558999999999988874 678889999999988764 899999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC-
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV- 328 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~- 328 (424)
+++++|++.++|+++..+.........+++++|.+++||+++++++.+++.+.++++++++.||+||+++.++......
T Consensus 235 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~ 314 (521)
T 3l8c_A 235 AQLPVGIWTSTPSFADMAMLSDDFCQAKMPALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEATVALSAIEITRE 314 (521)
T ss_dssp HHSCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEEECHH
T ss_pred HHcCCcEEEeCCCHHHHHhhhhccccccCccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccHHhhhhceeecccc
Confidence 9999999999999999998877666677899999999999999999999999998899999999999987666533221
Q ss_pred --CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh----------------hhccccCceEEEecC
Q 014435 329 --GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF----------------ELTVNCNLFSYFRSN 390 (424)
Q Consensus 329 --~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy----------------~~~~~TgD~g~~~~~ 390 (424)
......++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++
T Consensus 315 ~~~~~~~~~vG~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d~d 393 (521)
T 3l8c_A 315 MVDNYTRLPIGYPKPDSPTYIID-EDGKELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTED 393 (521)
T ss_dssp HHHHCSSCEEEEECTTSCEEEEC-TTSCBCCTTCCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEECSS
T ss_pred cccCCCccccccccCCCEEEEEC-CCcCCCCCCCceEEEecccccChhhcCCchHhhccCcCCCCceeeeCCCEEEEeCC
Confidence 123556899999999999999 6899999999999999999999999 248999999999999
Q ss_pred Cce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 391 DHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 391 g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
|.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 394 G~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~ 435 (521)
T 3l8c_A 394 NILLYGGRLDFQIKYAGYRIELEDVSQQLNQSPMVASAVAVP 435 (521)
T ss_dssp SCEEEEEEGGGBCC-----CBHHHHHHHHHTSTTEEEEEEEC
T ss_pred CeEEEeCcccceEeECCEEeCHHHHHHHHHcCCCcceEEEEE
Confidence 987 3 889999999999999999999999999885
No 19
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=3.5e-62 Score=474.92 Aligned_cols=385 Identities=25% Similarity=0.321 Sum_probs=286.8
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++.+++. ..+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++
T Consensus 20 pd~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l 99 (509)
T 3ivr_A 20 PDRTAFMVDGVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGAILLPVNYRLNADEIAFVL 99 (509)
T ss_dssp TTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHH
T ss_pred CCceEEEECCcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHH
Confidence 4444443 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcC----C-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEE
Q 014435 93 KDSNPKLVITVPELWDKVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAAL 167 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 167 (424)
+.++++++|++++....+... . ...++.... ....+.++...... ...+.....++|+++|
T Consensus 100 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~i 165 (509)
T 3ivr_A 100 GDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGD-------------GSGPFAPFKDLASD-TPFSAPEFGAADGFVI 165 (509)
T ss_dssp HHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSC-------------CCSSCEEGGGTCCC-SCCCCCCCCTTSEEEE
T ss_pred HhcCceEEEECcchhhhHHhhhcccCCceEEEEcCC-------------CCcChhhHhhccCC-CCCCcCCCCccccEEE
Confidence 999999999998876653221 1 111221111 01112222221111 2233445678999999
Q ss_pred ecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHH
Q 014435 168 LYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALR 247 (424)
Q Consensus 168 ~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 247 (424)
+|||||||.||+|.++|+++.............. .++++++.+|++|.+|+...+...+..|++++.. .+++..+++
T Consensus 166 ~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~~~~~-~~~~~~~~~ 242 (509)
T 3ivr_A 166 IHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLT--EADVNLGMLPLFHVTGLGLMLTLQQAGGASVIAA-KFDPAQAAR 242 (509)
T ss_dssp EEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCC--TTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-SCCHHHHHH
T ss_pred EeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCC--CCcEEEEeCCCcchhHHHHHHHHHHhCCcEEEec-ccCHHHHHH
Confidence 9999999999999999999998887776655543 3499999999999999975555556666555554 889999999
Q ss_pred HHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCC
Q 014435 248 AIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPL 327 (424)
Q Consensus 248 ~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 327 (424)
.++++++|++.++|+++..+++.. ...+++++|.++.+|++ +..+++.+.++++++++.||+||++++++.....
T Consensus 243 ~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~ 317 (509)
T 3ivr_A 243 DIEAHKVTVMAEFAPMLGNILDQA--APAQLASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSETSGLSTFAPYR 317 (509)
T ss_dssp HHHHHTCCEEEEETTHHHHHHHHC--CGGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGGGTEEEEEEEGG
T ss_pred HHHHHCCcEEEecHHHHHHHHhcc--cccchhhhheecccCCh---HHHHHHHHhcCCCeEEcccCccccccccccCccc
Confidence 999999999999999999998876 33457899999999987 8889999999889999999999998776654432
Q ss_pred CCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hhccccCceEEEecCCce--
Q 014435 328 VGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------ELTVNCNLFSYFRSNDHN-- 393 (424)
Q Consensus 328 ~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~~~~TgD~g~~~~~g~~-- 393 (424)
....++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 318 ---~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~g~~~TGDl~~~~~dG~l~~ 393 (509)
T 3ivr_A 318 ---DRPKSAGRPLFWRTVAVVD-AEDRPLPPGEVGEIVLRGPTVFKGYWNNAAATQHAFRNGWHHTGDMGRFDADGYLFY 393 (509)
T ss_dssp ---GSTTSCCEECTTCEEEEEC-TTSCBCCTTCCEEEEEESTTSCCEETTCHHHHHHHTGGGSEEEEEEEEECTTSCEEE
T ss_pred ---cCCCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEecCCccccccCCHHHhHHHhhcCCcccccEEEECCCceEEE
Confidence 2334599999999999999 6799999999999999999999999 789999999999999977
Q ss_pred ------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 ------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 ------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 394 ~GR~d~~d~ik~~G~~v~p~eiE~~l~~~p~V~~a~vv~ 432 (509)
T 3ivr_A 394 AGRAPEKELIKTGGENVYPAEVEGALKQHPAIADAVVIG 432 (509)
T ss_dssp EEEC-----------------------------------
T ss_pred eCCCCcceeEEECCEEECHHHHHHHHHhCCCceeEEEEe
Confidence 2 889999999999999999999999999985
No 20
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=1.8e-62 Score=482.77 Aligned_cols=379 Identities=19% Similarity=0.264 Sum_probs=283.9
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. ..+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++
T Consensus 89 pd~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l 168 (570)
T 4gr5_A 89 PDAVALLHEADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGGYTMLDPQFPVERLALSL 168 (570)
T ss_dssp TTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHH
T ss_pred CCCeEEECCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCEEEEcCCCChHHHHHHHH
Confidence 3444443 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+.++++++|++++....+... ..+...+ .... ............++|+++|+||||
T Consensus 169 ~~~~~~~~i~~~~~~~~~~~~---~~~~~~~-------------------~~~~--~~~~~~~~~~~~~~d~a~i~~TSG 224 (570)
T 4gr5_A 169 EDTGAPLLVTSRPLSGRLTGT---TTLYVED-------------------EAAS--DAPAGNLATGVGPEDVACVMFTSG 224 (570)
T ss_dssp HHHTCSEEEECTTTTTSSCSS---EEEECCC----------------------------CCCCCCCCCTTSEEEEECCSS
T ss_pred HhcCCCEEEecchhhhcccCC---cceeeec-------------------cccc--cccccccCCCCCCCCeEEEEECCc
Confidence 999999999987654332211 1111000 0000 000122233456899999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC--CCCHHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG--KFDIEMALRAIE 250 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~ 250 (424)
|||.||+|+++|+++...... ........+++++..+|++|..+. ..++.++..|+++++.+ .+++..+++.++
T Consensus 225 TTG~PKgV~~th~~l~~~~~~---~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~ 300 (570)
T 4gr5_A 225 STGRPKGVMSPHRALTGTYLG---QDYAGFGPDEVFLQCSPVSWDAFG-LELFGALLFGARCVLQSGQNPDPLEIGELVA 300 (570)
T ss_dssp CCSSCCCEEEEHHHHHHHHSS---CCSSCCSTTCEEEECSCTTSSTHH-HHHHHHHTTTCEEEECSSSSCCHHHHHHHHH
T ss_pred CCCCCeEEEEecHHHHHHHHh---hhhcCCCCCCEEEEecCccHHHHH-HHHHHHHhcCCEEEEcCCccCCHHHHHHHHH
Confidence 999999999999998765432 111223345899999999886665 36788999999999886 478999999999
Q ss_pred HccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC--
Q 014435 251 KYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV-- 328 (424)
Q Consensus 251 ~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~-- 328 (424)
++++|++.++|+++..|.+... ..+++||.+++||+++++++.+++.+.++++++++.||+||++++++......
T Consensus 301 ~~~vt~~~~~P~~~~~l~~~~~---~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~ 377 (570)
T 4gr5_A 301 RHGVTMLQLSASLFNFLVDEVP---EAFEGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAESMGFTTHHAVVAGD 377 (570)
T ss_dssp HHTCCEEEEEHHHHHHHHHHCG---GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCGGG
T ss_pred HcCCcEEEecHHHHHHHHhhch---hhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhheeeeeeeeecccc
Confidence 9999999999999999987643 24789999999999999999999999998899999999999887666533221
Q ss_pred CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------h--------hccccCceEEE
Q 014435 329 GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------E--------LTVNCNLFSYF 387 (424)
Q Consensus 329 ~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~--------~~~~TgD~g~~ 387 (424)
......++|+|+++++++|+| +++++++.|+.|||+|+|+.++.|| + +||+|||+|++
T Consensus 378 ~~~~~~~iG~p~~~~~v~i~d-~~~~~~~~G~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~ 456 (570)
T 4gr5_A 378 LSGTALPIGVPLAGKRAYVLD-DDLKPAANGALGELYVAGAGLAHGYVSRPALTAERFVADPFAGPGGERMYRTGDLARR 456 (570)
T ss_dssp TTSSSCCCBEECTTEEEEEEC-TTSCBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCSSCCEEEEEEEEEEE
T ss_pred cCCCccccceeeCCCEEEEEC-CCCCCCCCCCcEEEEEeecccchhcCCCchhhhcccccCCCCCCCCCEEEeCCCeEEE
Confidence 134456799999999999999 7899999999999999999999999 1 59999999999
Q ss_pred ecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 388 RSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 388 ~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 457 d~dG~l~~~GR~~d~Ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~ 501 (570)
T 4gr5_A 457 RADGVLEYVGRADDQVKIRGFRVEPGEVEARLVGHPAVRQAAVLA 501 (570)
T ss_dssp CTTSCEEEEEC----------------------------------
T ss_pred CCCCeEEEEcccCCEEEECcEEeCHHHHHHHHhcCCCcceEEEEE
Confidence 999987 3 999999999999999999999999999985
No 21
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=4.5e-62 Score=474.17 Aligned_cols=384 Identities=19% Similarity=0.235 Sum_probs=322.6
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~-gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
++..++. ..+++||+||.++++++|++|+++ |.++|++|+++++|++++++++|||+++|++++|+++.++.+++.++
T Consensus 15 p~~~Al~~~~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~ 94 (511)
T 3e7w_A 15 PQTDAFRSQGQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPYIPVDLSIPSERIAKI 94 (511)
T ss_dssp TTSEEEEETTEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHH
T ss_pred CCCeEEEcCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCEEEecCCCChHHHHHHH
Confidence 3344443 346799999999999999999875 88899999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCC
Q 014435 92 VKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSS 171 (424)
Q Consensus 92 l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 171 (424)
++.++++++|++++...... ........++++...... .........++++++|+|||
T Consensus 95 l~~~~~~~li~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TS 152 (511)
T 3e7w_A 95 IESSGAELLIHAAGLSIDAV---------------------GQQIQTVSAEELLENEGG-SVSQDQWVKEHETFYIIYTS 152 (511)
T ss_dssp HHHHTCCEEEESSSCCTTCC---------------------CCSSCEEEHHHHHTSCSC-CCCGGGSCCTTSEEEEEEEC
T ss_pred HHhCCCCEEEecccccchhc---------------------ccccceecHhhhhccccC-CccccccCCCCCeEEEEECC
Confidence 99999999999754321110 001122334444433221 12223345678999999999
Q ss_pred CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHH
Q 014435 172 GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRA 248 (424)
Q Consensus 172 GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~ 248 (424)
||||.||+|.++|+++.............. .++++++.+|++|..++. .++.++..|+++++.+. +++..+++.
T Consensus 153 GTTG~PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~~ 229 (511)
T 3e7w_A 153 GSTGNPKGVQISAANLQSFTDWICADFPVS--GGKIFLNQAPFSFDLSVM-DLYPCLQSGGTLHCVTKDAVNKPKVLFEE 229 (511)
T ss_dssp CTTSSCEEEEEEHHHHHHHHHHHHHHSTTT--TTCEEEECSCTTSTHHHH-HHHHHHHTTCEEEECCHHHHHSHHHHHHH
T ss_pred CCCCCCCEEEEcHHHHHHHHHHHHHhcCCC--ccceEEEeCCccHHHHHH-HHHHHHhcCCEEEEcChhhhcCHHHHHHH
Confidence 999999999999999998877766655543 349999999999999984 78899999999999876 689999999
Q ss_pred HHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC
Q 014435 249 IEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV 328 (424)
Q Consensus 249 i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~ 328 (424)
++++++|++.++|+++..++.........++++|.+++||+++++++.+++.+.++++++++.||+||+++.++......
T Consensus 230 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~ 309 (511)
T 3e7w_A 230 LKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEATVAVTSVEITN 309 (511)
T ss_dssp HHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGSSCSEEEEECH
T ss_pred HHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchheeeeeEEeccc
Confidence 99999999999999999999887766777899999999999999999999999998899999999999987666433221
Q ss_pred ---CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh--------------hh--ccccCceEEEec
Q 014435 329 ---GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF--------------EL--TVNCNLFSYFRS 389 (424)
Q Consensus 329 ---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy--------------~~--~~~TgD~g~~~~ 389 (424)
......++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++ ||+|||+|++ +
T Consensus 310 ~~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDlg~~-~ 387 (511)
T 3e7w_A 310 DVISRSESLPVGFAKPDMNIFIMD-EEGQPLPEGEKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDAGFI-Q 387 (511)
T ss_dssp HHHTTCSSCCCBEECTTCEEEEEC-TTSCBCCTTCCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEEEEEE-E
T ss_pred cccccCCcCCCcceeCCCEEEEEC-CCCCCCCCCCceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCCeEEc-c
Confidence 133556799999999999999 6899999999999999999999999 12 7999999999 5
Q ss_pred CCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 390 NDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 390 ~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
||.+ | |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 388 dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~ 430 (511)
T 3e7w_A 388 DGQIFCQGRLDFQIKLHGYRMELEEIEFHVRQSQYVRSAVVIP 430 (511)
T ss_dssp TTEEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTEEEEEEEE
T ss_pred CCeEEEEccccCEEEECCEEeCHHHHHHHHHhCCCcceEEEEE
Confidence 8877 3 999999999999999999999999999984
No 22
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=8.2e-62 Score=480.37 Aligned_cols=377 Identities=15% Similarity=0.168 Sum_probs=311.8
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. .++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++
T Consensus 41 Pd~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa~~vpld~~~p~~~l~~il 120 (620)
T 4dg8_A 41 PHREAIRDRFGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYIDLKQPAAWNAELC 120 (620)
T ss_dssp TTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHH
T ss_pred CCCeEEEcCCCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEeeCccChHHHHHHHH
Confidence 4455554 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
++++++++++++......... .. ...... .............++++++++||||
T Consensus 121 ~~~~~~~vl~~~~~~~~~~~~--~~---------------------~~~~~~---~~~~~~~~~~~~~~~d~a~iiyTSG 174 (620)
T 4dg8_A 121 RQVDCRLILDCSTTPTPANGL--PC---------------------VPVRHL---PAAPASVARPCFAADQIAYINFSSG 174 (620)
T ss_dssp HHHTEEEEEECCSSCCCCTTS--CE---------------------EEGGGC---CCCCCCSSCCCCCTTSEEEEEEEBS
T ss_pred HhCCCcEEEecCcccccccCC--ce---------------------eeeccC---CcCCccccCCCCCCCCeEEEEECCC
Confidence 999999999765432211110 00 000100 0000112223346899999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC--CCCHHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG--KFDIEMALRAIE 250 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~ 250 (424)
|||.||+|+++|+++...... ... .....+++++..+|++|..++. .++.++..|+++++.+ .+++..+.+.++
T Consensus 175 STG~PKgV~~th~~l~~~~~~-~~~--~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~ 250 (620)
T 4dg8_A 175 TTGRPKAIACTHAGITRLCLG-QSF--LAFAPQMRFLVNSPLSFDAATL-EIWGALLNGGCCVLNDLGPLDPGVLRQLIG 250 (620)
T ss_dssp SSSSCEEEEEEHHHHHHHHSS-CGG--GTTCTTCEEEECSCTTSTHHHH-HHHHHHTTTCEEEECCSSSCCHHHHHHHHH
T ss_pred ccccCeEEEEchHHHHHHHHH-HHh--hCCCCCCEEEEECccCHHHHHH-HHHHHHhcCCEEEeCccccCCHHHHHHHHH
Confidence 999999999999998776443 222 2233459999999999999985 6889999999999964 579999999999
Q ss_pred HccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCC--C
Q 014435 251 KYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPL--V 328 (424)
Q Consensus 251 ~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~--~ 328 (424)
++++|++.++|+++..+.+... ..+++||.+++||++++++..+++.+.++++++++.||+||++..++..... .
T Consensus 251 ~~~vt~~~~~Ps~~~~l~~~~~---~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~ 327 (620)
T 4dg8_A 251 ERGADSAWLTASLFNTLVDLDP---DCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDD 327 (620)
T ss_dssp TTCCCEEEEEHHHHHHHHHHCG---GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCTGG
T ss_pred HhCCcEEEccHHHHHHHHhcCh---hhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEchhhhhhheEEEeccccc
Confidence 9999999999999999986532 3478999999999999999999998888889999999999998766543222 2
Q ss_pred CccCCCccccccCCcEEEEeeCCCCcc-CCCCCceeEEEecCCcchhh------------h--------hccccCceEEE
Q 014435 329 GVRRSGSAGTLVAGVEAQIVSVDTLKP-LPPNQLGEIWVRGPNVTPVF------------E--------LTVNCNLFSYF 387 (424)
Q Consensus 329 ~~~~~~~~G~~~~~~~~~i~d~~~~~~-~~~g~~Gel~v~~~~~~~gy------------~--------~~~~TgD~g~~ 387 (424)
......++|+|+++++++|+| +++++ ++.|+.|||+++|+.++.|| + +||+|||+|++
T Consensus 328 ~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~ 406 (620)
T 4dg8_A 328 LEEDDIPIGKAIAGTAVLLLD-EHGQEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARY 406 (620)
T ss_dssp GGSSSCCCBEECTTEEEEEEC-TTSCBCCSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEE
T ss_pred cCCCCCCceecccCcEEEEEC-ccCCCCCCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEE
Confidence 234567899999999999999 46655 89999999999999999999 1 68999999999
Q ss_pred ecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 388 RSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 388 ~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||.+ | ||++|++|+|.|||++|.+||+|++|+|++
T Consensus 407 ~~dG~l~~~GR~dd~Ik~~G~ri~~~eIE~~l~~~p~V~~a~Vv~ 451 (620)
T 4dg8_A 407 DEQGRLRFIGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALLV 451 (620)
T ss_dssp CTTSCEEEEECSSSEEEETTEEEEHHHHHHHHHTSTTEEEEEEEE
T ss_pred CCCCeEEEEccCCCEEEECCEEcCHHHHHHHHHhCCCccEEEEEE
Confidence 999987 3 999999999999999999999999999974
No 23
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=1.8e-61 Score=474.02 Aligned_cols=378 Identities=18% Similarity=0.221 Sum_probs=308.4
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. ..+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++
T Consensus 53 p~~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il 132 (563)
T 1amu_A 53 PNNVAIVCENEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPKERIQYIL 132 (563)
T ss_dssp TTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHH
T ss_pred CCCeEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHH
Confidence 3444443 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
++++++++|++++....+........+..... ..+ .... .........++|+++++||||
T Consensus 133 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~-~~~~--~~~~~~~~~~~d~a~i~~TSG 192 (563)
T 1amu_A 133 DDSQARMLLTQKHLVHLIHNIQFNGQVEIFEE-----------------DTI-KIRE--GTNLHVPSKSTDLAYVIYTSG 192 (563)
T ss_dssp HHHTCSEEEECGGGHHHHTTSCCCSEEEECCC-----------------STT-TTSC--CSCCCCCCCTTSEEEEEEEC-
T ss_pred HhcCCCEEEEcCchhhhhhhccccCceeeecc-----------------hhh-cccc--CccCCCCCCCCCeEEEEECCC
Confidence 99999999999877665554432211111110 000 0000 111123346789999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i 249 (424)
|||.||+|+++|+++............. ..++++++.+|++|..++. .++.++..|+++++.+. +++..+++.+
T Consensus 193 TTG~PKgV~~th~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~~~~i 269 (563)
T 1amu_A 193 TTGNPKGTMLEHKGISNLKVFFENSLNV--TEKDRIGQFASISFDASVW-EMFMALLTGASLYIILKDTINDFVKFEQYI 269 (563)
T ss_dssp ----CEEEEEESHHHHHHHHHHHHTSCC--CTTCEEEECSCTTSTHHHH-HHHHHHTTTCEEEECCHHHHTCHHHHHHHH
T ss_pred CCCCCcEEEEehHHHHHHHHHHHHhcCC--CCCCEEEEeCCccHHHHHH-HHHHHHHCCCEEEEcChHhhcCHHHHHHHH
Confidence 9999999999999998876665544443 3449999999999999885 67889999999998875 6899999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC-
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV- 328 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~- 328 (424)
+++++|++.++|+++..+... .++++|.+++||+++++++.++|.+. +++++.||+||++..++......
T Consensus 270 ~~~~~t~~~~~P~~~~~l~~~------~~~~lr~~~~gG~~l~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~~~ 340 (563)
T 1amu_A 270 NQKEITVITLPPTYVVHLDPE------RILSIQTLITAGSATSPSLVNKWKEK---VTYINAYGPTETTICATTWVATKE 340 (563)
T ss_dssp HHTTCCEEEECHHHHTTSCTT------TCCSCSEEEEESSCCCHHHHHHHTTT---SEEEEEECCGGGSSCSEEEECCSS
T ss_pred HHcCCcEEEeCHHHHHHHHhc------ccccccEEEEEEecCCHHHHHHHHhC---CeEEEEECcCHHhHhheeeecccc
Confidence 999999999999998776432 36899999999999999999999764 78999999999987665533221
Q ss_pred CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------h-------hccccCceEEEec
Q 014435 329 GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------E-------LTVNCNLFSYFRS 389 (424)
Q Consensus 329 ~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~-------~~~~TgD~g~~~~ 389 (424)
......++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| + +||+|||+|++++
T Consensus 341 ~~~~~~~vG~p~~~~~v~i~d-~~~~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGDlg~~d~ 419 (563)
T 1amu_A 341 TIGHSVPIGAPIQNTQIYIVD-ENLQLKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLS 419 (563)
T ss_dssp CCCSSCCCBEECTTEEEEEEC-TTSCBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECT
T ss_pred cCCCCCcccceeCCCEEEEEC-CCcCCCCCCCcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCCEEEEcC
Confidence 123567899999999999999 7899999999999999999999999 1 3999999999999
Q ss_pred CCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 390 NDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 390 ~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
||++ | |+++|++|+|.|||++|.+||+|.+|+|++
T Consensus 420 dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~p~V~~a~Vv~ 462 (563)
T 1amu_A 420 DGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYISETAVSV 462 (563)
T ss_dssp TSCEEEEEEGGGEEEETTEEEEHHHHHHHHTTSTTEEEEEEEE
T ss_pred CCeEEEeccccCEEEECCEEeCHHHHHHHHHhCCCcceEEEEE
Confidence 9987 3 999999999999999999999999999974
No 24
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=5.1e-61 Score=476.48 Aligned_cols=392 Identities=20% Similarity=0.237 Sum_probs=322.7
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. .++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++
T Consensus 39 pd~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA~l~aG~~~vpl~~~~~~~~l~~~l 118 (617)
T 3rg2_A 39 SDSIAVIDGERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQRSELNAYA 118 (617)
T ss_dssp CCSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEEECTTCCHHHHHHHH
T ss_pred CCCeEEecCCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhcCeEEccCCccccHHHHHHHH
Confidence 3444444 345699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchH--------HH-hcCC-CCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCC
Q 014435 93 KDSNPKLVITVPELWD--------KV-KDLN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQT 162 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~--------~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (424)
+.+++++++++.+... .+ .... ...+...... ....+.+...... .........++
T Consensus 119 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~--~~~~~~~~~~~ 184 (617)
T 3rg2_A 119 SQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDS------------GEHNLQDAINHPA--EDFTATPSPAD 184 (617)
T ss_dssp HHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCC------------STTBHHHHHHSCC--SSCCCCCCCTT
T ss_pred hhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccc------------cccchhhhhcccc--cccCCCCCCCC
Confidence 9999999999876531 11 1111 1222221110 1112233332222 22233445679
Q ss_pred CEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHH-HHHHHhhcCceEEecCCCC
Q 014435 163 DAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILYDQLQKGNCVVSMGKFD 241 (424)
Q Consensus 163 ~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~ 241 (424)
++++++|||||||.||+|+++|+++...+.......... .++++++.+|++|.+++.. .++.++..|+++++.+..+
T Consensus 185 ~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~--~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~~~~ 262 (617)
T 3rg2_A 185 EVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFT--QQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPS 262 (617)
T ss_dssp SEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCC--TTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECSSCC
T ss_pred CeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCC--CcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeCCCC
Confidence 999999999999999999999999998887776665554 3499999999999998864 4788999999999998899
Q ss_pred HHHHHHHHHHccceEEEechHHHHHHHhcccccc--CCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCC
Q 014435 242 IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCA 319 (424)
Q Consensus 242 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~--~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 319 (424)
+..+++.++++++|++.++|+++..+++...... ..++++|.+++||+++++++.+++.+.+ ++++++.||+||++.
T Consensus 263 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~-~~~~~~~YG~tE~~~ 341 (617)
T 3rg2_A 263 ATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEI-GCQLQQVFGMAEGLV 341 (617)
T ss_dssp HHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCCCHHHHHHHHHHT-CSEEEEEEEETTEEE
T ss_pred HHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcCCHHHHHHHHHHh-CCcEEEEeccCccee
Confidence 9999999999999999999999999987644332 3688999999999999999999999988 699999999999875
Q ss_pred ceeecCCCCCccCCCcccccc-CCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------hhccccCceE
Q 014435 320 PISLENPLVGVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------ELTVNCNLFS 385 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g 385 (424)
.++.. .........++|+|+ ++.+++|+| +++++++.|+.|||+++|+.++.|| ++||+|||+|
T Consensus 342 ~~~~~-~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl~ 419 (617)
T 3rg2_A 342 NYTRL-DDSAEKIIHTQGYPMCPDDEVWVAD-AEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLI 419 (617)
T ss_dssp EECCT-TSCHHHHHHCCCEESCTTCEEEEEC-TTSCBCCTTCCEEEEEECSSSCSCCTTCHHHHHHHBCTTSCEEEEEEE
T ss_pred ecccC-CCcccccccCCCccCCCCceEEEEC-CCCCCCCCCCceEEEecCccccchhcCChhhhhhccCCCCceecCceE
Confidence 44332 221123345789997 788999999 7899999999999999999999999 6789999999
Q ss_pred EEecCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 386 YFRSNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 386 ~~~~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++++||.+ | |+++|++|+|.|||++|.+||+|.+|+|++
T Consensus 420 ~~~~dG~l~~~GR~dd~iki~G~ri~~~eIE~~l~~~p~V~~a~vv~ 466 (617)
T 3rg2_A 420 SIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVS 466 (617)
T ss_dssp EECTTSCEEEEEECSSEEEETTEEEEHHHHHHHHTTSTTEEEEEEEE
T ss_pred EEcCCceEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCeeEEEEEe
Confidence 99999987 3 999999999999999999999999999974
No 25
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=1.8e-60 Score=470.69 Aligned_cols=383 Identities=20% Similarity=0.256 Sum_probs=315.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCC-------HHHHHHHHH
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT-------VSELSKQVK 93 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~-------~~~i~~~l~ 93 (424)
.++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+++.++ .+++.++++
T Consensus 46 ~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~ 125 (576)
T 3gqw_A 46 LEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLA 125 (576)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHH
T ss_pred ceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHH
Confidence 3467999999999999999999999999999999999999999999999999999999999998 899999999
Q ss_pred hcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCC
Q 014435 94 DSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGT 173 (424)
Q Consensus 94 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 173 (424)
.+++++++++++....+....... .......... ...... .........++++++++|||||
T Consensus 126 ~~~~~~ii~~~~~~~~~~~~~~~~----------------~~~~~~~~~~-~~~~~~-~~~~~~~~~~~d~a~i~~TSGT 187 (576)
T 3gqw_A 126 SCQPAAIITGDEWLPLVNAATHDN----------------PELHVLSHAW-FKALPE-ADVALQRPVPNDIAYLQYTSGS 187 (576)
T ss_dssp HHCCSEEEECGGGHHHHHHHGGGC----------------TTCEEEEHHH-HHTSCC-CCCCCCCCCTTSEEEEECTTSC
T ss_pred hcCCCEEEecHHHHHHHHHhhccC----------------Ccceecchhh-hhcccc-cccccCCCCCCCeEEEEeCCCC
Confidence 999999999988776654432100 0000000010 111111 1222334568999999999999
Q ss_pred CCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC----CCHHHHHHHH
Q 014435 174 TGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAI 249 (424)
Q Consensus 174 TG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i 249 (424)
||.||+|+++|+++........... .....++++++.+|++|.+|+...++.++..|+++++.+. +++..+++.+
T Consensus 188 TG~PKgV~~sh~~~~~~~~~~~~~~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i 266 (576)
T 3gqw_A 188 TRFPRGVIITHREVMANLRAISHDG-IKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLI 266 (576)
T ss_dssp SSSCCCEEEEHHHHHHHHHHHHHTT-SCCCTTCCEEECCCTTSHHHHHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHH
T ss_pred CCCCceEEeeHHHHHHHHHHhhhcc-cCCCCcceEEEcCCccccccHHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHH
Confidence 9999999999999988766554331 2233458999999999999997678888999999988864 5889999999
Q ss_pred HHccceEEEechHHHHHHHhccc---cccCCCCCeeEEEecCCCCCHHHHHHHHHhCC-----CCeEEecccCccCCCce
Q 014435 250 EKYRVTVWWVVPPIILALAKNSL---VRKFDISSLKLVGSGAAPLGKELMEDCQKNIP-----GATIFQGYGMTETCAPI 321 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~---~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~yG~tE~~~~~ 321 (424)
+++++|+++++|+++..+.+... ....+++++|.+++||+++++++.++|.+.++ +.++++.||+||+++.+
T Consensus 267 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~ 346 (576)
T 3gqw_A 267 SKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPISAEQLHQFAECFRQVNFDNKTFMPCYGLAENALAV 346 (576)
T ss_dssp HHTTCCEEEECHHHHHHHHHSCCHHHHTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEE
T ss_pred HHhCCeEEEcCHHHHHHHHHHhcccccccCChhhhHhhhccCccCCHHHHHHHHHHHhhcCCCcccccccCCccccccee
Confidence 99999999999999988766433 23456899999999999999999999999874 68999999999998877
Q ss_pred eecCCCCC--------------------------ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh
Q 014435 322 SLENPLVG--------------------------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF 375 (424)
Q Consensus 322 ~~~~~~~~--------------------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy 375 (424)
+....... .....++|+|+++++++|+| +++++++.|+.|||+++|+.++.||
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~~~~gY 425 (576)
T 3gqw_A 347 SFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGIEIRN-EAGMPVAERVVGHICISGPSLMSGY 425 (576)
T ss_dssp EECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECTTCEEEEEC-TTSCBCCTTBCEEEEEESTTSCCCB
T ss_pred ecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCCCCeEEEEC-CCCCCCCCCCeEEEEEeCccccccc
Confidence 65432211 01122789999999999999 7999999999999999999999999
Q ss_pred ------------hhccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 376 ------------ELTVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 376 ------------~~~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
++||+|||+|++ +||.+ | |+++|++|+|.|||++|.+||+|.+++|++
T Consensus 426 ~~~~~~~~~~~~~g~~~TGDl~~~-~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~vv~ 493 (576)
T 3gqw_A 426 FGDQVSQDEIAATGWLDTGDLGYL-LDGYLYVTGRIKDLIIIRGRNIWPQDIEYIAEQEPEIHSGDAIA 493 (576)
T ss_dssp TTCHHHHHHHHHHSCEEEEEEEEE-ETTEEEEEEETTTCEEETTEEECHHHHHHHHTTSSSCCTTSEEE
T ss_pred cCCccccccccCCCeeeccceEEE-ECCEEEEEecCcceEEECCEEECHHHHHHHHHhCcccccccEEE
Confidence 789999999999 68877 3 999999999999999999999999988763
No 26
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-60 Score=463.68 Aligned_cols=393 Identities=21% Similarity=0.258 Sum_probs=309.3
Q ss_pred cCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++. ..+++||+||.++++++|++|++. +||+|+++++|++++++++|||+++|++++|+++.++.+++.+++
T Consensus 15 pd~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l 91 (501)
T 3ipl_A 15 GHHIAITDGQESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNEMTNQM 91 (501)
T ss_dssp TTSEEEECSSCEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHH
T ss_pred CCceEEEeCCcEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCccCCHHHHHHHH
Confidence 3444443 345799999999999999999986 899999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCC--CeEEEecCCCccccccccCCCcc-cchhhhhhccCCCCCCCCCCCCCCCEEEEec
Q 014435 93 KDSNPKLVITVPELWDKVKDLNL--PAVLLGSKDKVSSSGLISRSSKI-VSFHDLIELSGSVTDIPDVSVKQTDAAALLY 169 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 169 (424)
+.++++++|++.+.......... ....................... ...+.... .............++|+++++|
T Consensus 92 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~a~i~~ 170 (501)
T 3ipl_A 92 RSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYDTSNETVVP-KESPSNILNTSFNLDDIASIMF 170 (501)
T ss_dssp HHTTCCEEEESSCCCCTTSEEEETTC---------------------------------CCHHHHTCCCCCTTSEEEEEE
T ss_pred HhcCCCEEEEccccccccccccccccceeeeeecccccccccccccccccchhhccc-cCCcccccccCCCCCCeEEEEE
Confidence 99999999999775443321100 00000000000000000000000 00000000 0000111223456899999999
Q ss_pred CCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHH
Q 014435 170 SSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAI 249 (424)
Q Consensus 170 TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 249 (424)
||||||.||+|.++|+++.............. .++++++.+|++|.+|+. .++.++..|+++++.+.+++..+++.+
T Consensus 171 TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i 247 (501)
T 3ipl_A 171 TSGTTGPQKAVPQTFRNHYASAIGCKESLGFD--RDTNWLSVLPIYHISGLS-VLLRAVIEGFTVRIVDKFNAEQILTMI 247 (501)
T ss_dssp CCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCC--TTCEEEECSCTTSHHHHH-HHHHHHHHTCEEEECSSCCHHHHHHHH
T ss_pred CCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCC--ccCEEEEeCcHHHHHHHH-HHHHHHHcCceEEeCCCCCHHHHHHHH
Confidence 99999999999999999998877766555443 449999999999999996 578899999999999999999999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCC
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 329 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 329 (424)
+++++|++.++|+++..|.+...... .++|.+++||+++++++.+++.+. ++++++.||+||+++.+....+...
T Consensus 248 ~~~~~t~~~~~P~~~~~l~~~~~~~~---~~lr~i~~gG~~l~~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~ 322 (501)
T 3ipl_A 248 KNERITHISLVPQTLNWLMQQGLHEP---YNLQKILLGGAKLSATMIETALQY--NLPIYNSFGMTETCSQFLTATPEML 322 (501)
T ss_dssp HHSCCCEEEECHHHHHHHHHHTCCSC---TTCCEEEECSSCCCHHHHHHHHHT--TCCEEEEEEEGGGTEEEEEECHHHH
T ss_pred HHcCCcEEEchHHHHHHHHhcCCCCc---CcccEEEEeCCCCCHHHHHHHHHh--CCCEeccccccccccceeecCcccc
Confidence 99999999999999999988765433 389999999999999999999884 7999999999998876655444333
Q ss_pred ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-----------hhccccCceEEEecCCce-----
Q 014435 330 VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-----------ELTVNCNLFSYFRSNDHN----- 393 (424)
Q Consensus 330 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-----------~~~~~TgD~g~~~~~g~~----- 393 (424)
....+++|+|+++++++|+|++ .|+.|||+++|+.++.|| ++||+|||+|+++++|.+
T Consensus 323 ~~~~~~~G~p~~~~~~~i~d~~------~~~~GEl~v~g~~~~~gY~~~~~~t~~~~~g~~~TGDl~~~~~~G~l~~~GR 396 (501)
T 3ipl_A 323 HARPDTVGMPSANVDVKIKNPN------KEGHGELMIKGANVMNGYLYPTDLTGTFENGYFNTGDIAEIDHEGYVMIYDR 396 (501)
T ss_dssp HHCTTCCBEECTTCEEEEESCC------SSCCEEEEEESTTSCSCCSBSTTCCCSEETTEEEEEEEEEECTTSCEEEEEE
T ss_pred ccCCCCCCCCCCCcEEEEecCC------CCCccEEEEeccchhhhhCcChhhcchhcCCceecCCEEEEcCCCeEEEEcc
Confidence 4567899999999999999953 567899999999999999 678999999999999987
Q ss_pred --e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 --D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 --d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| |+++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 397 ~dd~ik~~G~~v~p~eiE~~l~~~p~V~~~~vv~ 430 (501)
T 3ipl_A 397 RKDLIISGGENIYPYQIETVAKQFPGISDAVCVG 430 (501)
T ss_dssp CCCCEECSSCEECHHHHHHHHTTSTTEEEEEEEE
T ss_pred ccceEEECCEEECHHHHHHHHHhCCCccEEEEEE
Confidence 3 999999999999999999999999999985
No 27
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=8.8e-61 Score=463.69 Aligned_cols=371 Identities=24% Similarity=0.357 Sum_probs=303.9
Q ss_pred CCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHh
Q 014435 16 RPPLV-LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKD 94 (424)
Q Consensus 16 ~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~ 94 (424)
.+++. ..+++||+||.++++++|+.|. .|++|+++++|++++++++|||+++|++++|++|.++.+++.+++++
T Consensus 39 ~~Al~~~~~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~~la~~~~Ga~~vpl~~~~~~~~l~~il~~ 113 (505)
T 3nyq_A 39 RPALRFGERSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVAVVAALLAGVAAVPLNPKSGDKELAHILSD 113 (505)
T ss_dssp SEEEEETTEEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHHHHHHHHHTCCEEEECTTCCHHHHHHHHHH
T ss_pred CeEEEECCeeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHH
Confidence 55554 3456999999999999998875 37899999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCC
Q 014435 95 SNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTT 174 (424)
Q Consensus 95 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 174 (424)
++++++|++++............+.. .. ......+.....++|+++++||||||
T Consensus 114 ~~~~~vi~~~~~~~~~~~~~~~~~~~---------------------~~-----~~~~~~~~~~~~~~d~a~i~~TSGTT 167 (505)
T 3nyq_A 114 SAPSLVLAPPDAELPPALGALERVDV---------------------DV-----RARGAVPEDGADDGDPALVVYTSGTT 167 (505)
T ss_dssp HCCSEEEECTTCCCCGGGTTSEEEEC---------------------CT-----TCCCCCCCCCCCTTSEEEEEEECCSS
T ss_pred CCCCEEEECCccccchhhcccccccc---------------------cc-----ccccCCCCCCCCCCCeEEEEeCCCCc
Confidence 99999999865211000000000000 00 00011223345678999999999999
Q ss_pred CCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCCHHHHHHHHHHccc
Q 014435 175 GVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRV 254 (424)
Q Consensus 175 G~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~ 254 (424)
|.||+|+++|+++............... ++++++.+|++|..|+...++.++..|+++++.+.+++..+++.+ ++++
T Consensus 168 G~PKgV~~sh~~l~~~~~~~~~~~~~~~--~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i-~~~~ 244 (505)
T 3nyq_A 168 GPPKGAVIPRRALATTLDALADAWQWTG--EDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLGRFSTEGAAREL-NDGA 244 (505)
T ss_dssp SSCEEEEEEHHHHHHHHHHHHHHHTCCT--TCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECSSCCHHHHHHHH-TTTC
T ss_pred CCCCeEEEeHHHHHHHHHHHHHHhCCCC--CcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECCCCChHHHHHHH-hhCC
Confidence 9999999999999998877766655543 499999999999999876788999999999999999999999999 8899
Q ss_pred eEEEechHHHHHHHhcccc---ccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCcc
Q 014435 255 TVWWVVPPIILALAKNSLV---RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVR 331 (424)
Q Consensus 255 t~~~~~p~~~~~l~~~~~~---~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~ 331 (424)
|+++++|+++..+.+.... ....++++|.+++||+++++++.+++.+.+ ++++++.||+||++..++..... ..
T Consensus 245 t~~~~~P~~~~~l~~~~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~--~~ 321 (505)
T 3nyq_A 245 TMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAAT-GRRVIERYGMTETLMNTSVRADG--EP 321 (505)
T ss_dssp CEEEECHHHHHHHHHHGGGCHHHHHHHHHCSEEEECSSCCCHHHHHHHHHHH-SCCCEEEEEETTTEEEEECCTTS--CC
T ss_pred eEEEehHHHHHHHHHhhhcCchhhcccccceEEEECCCCCCHHHHHHHHHhc-CCeeecccchhhcccccccCCCC--CC
Confidence 9999999999999874322 223467899999999999999999999987 69999999999998766554333 45
Q ss_pred CCCccccccCCcEEEEeeCCCCccCCC---CCceeEEEecCCcchhh-------------hhccccCceEEEecCCce--
Q 014435 332 RSGSAGTLVAGVEAQIVSVDTLKPLPP---NQLGEIWVRGPNVTPVF-------------ELTVNCNLFSYFRSNDHN-- 393 (424)
Q Consensus 332 ~~~~~G~~~~~~~~~i~d~~~~~~~~~---g~~Gel~v~~~~~~~gy-------------~~~~~TgD~g~~~~~g~~-- 393 (424)
..+++|+|+++++++|+| +++++++. |+.|||+++|+.++.|| ++||+|||+|++++||.+
T Consensus 322 ~~~~vG~p~~~~~~~i~d-~~g~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~~~dG~l~~ 400 (505)
T 3nyq_A 322 RAGTVGVPLPGVELRLVE-EDGTPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRI 400 (505)
T ss_dssp CTTCCCEECTTCEEEEC------CCCCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEEEEECTTSCEEE
T ss_pred CCCCcccCCCCCEEEEEC-CCCCCcccCCCCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCeEEECCCccEEE
Confidence 678999999999999999 67888876 89999999999999999 679999999999999977
Q ss_pred -----e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 394 -----D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 394 -----d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
| ++++|++|+|.|||++|.+||+|.+|+|+|
T Consensus 401 ~GR~~d~~ik~~G~~v~~~eIE~~l~~~p~V~~a~Vv~ 438 (505)
T 3nyq_A 401 VGRKATDLIKSGGYKIGAGEIENALLEHPEVREAAVTG 438 (505)
T ss_dssp EEESSCCCEEETTEEECHHHHHHHHTTSTTEEEEEEEE
T ss_pred eCCccCceEEeCCEEECHHHHHHHHHHCcCccEEEEEe
Confidence 3 999999999999999999999999999985
No 28
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=2.4e-60 Score=470.81 Aligned_cols=384 Identities=21% Similarity=0.268 Sum_probs=313.0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCC---HHHHHHHHHhcCCe
Q 014435 22 PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT---VSELSKQVKDSNPK 98 (424)
Q Consensus 22 ~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~---~~~i~~~l~~~~~~ 98 (424)
++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|++|.++ .+++.++++.++++
T Consensus 38 ~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~ 117 (590)
T 3kxw_A 38 EETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLYAGCIAVPIYPPAQEKLLDKAQRIVTNSKPV 117 (590)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHCCS
T ss_pred eEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCcEEEEecCCCchHHHHHHHHHHHhCCCC
Confidence 467999999999999999999999999999999999999999999999999999999999884 57899999999999
Q ss_pred EEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcc
Q 014435 99 LVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSK 178 (424)
Q Consensus 99 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 178 (424)
+++++.+....+.......... .........+.+..... .........++|+++|+|||||||.||
T Consensus 118 ~vi~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PK 183 (590)
T 3kxw_A 118 IVLMIADHIKKFTADELNTNPK------------FLKIPAIALESIELNRS--SSWQPTSIKSNDIAFLQYTSGSTMHPK 183 (590)
T ss_dssp EEEECHHHHHHHCC-----CCE------------ETTEEEEEGGGCCGGGG--GGCCCCCCCTTSEEEEEECSSCSSSCC
T ss_pred EEEeCHHHHHHHHHhhhhhccc------------ccccceeechhcccccc--ccCCCCCCCCCCeEEEEeCcCCCCCce
Confidence 9999987766654432100000 00000111111111111 122334556899999999999999999
Q ss_pred hhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCC----CHHHHHHHHHHccc
Q 014435 179 GVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKF----DIEMALRAIEKYRV 254 (424)
Q Consensus 179 ~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~~ 254 (424)
+|+++|+++...+.......... .++++++.+|++|.+|+...++.++..|+++++.+++ ++..+++.++++++
T Consensus 184 gV~~th~~l~~~~~~~~~~~~~~--~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~ 261 (590)
T 3kxw_A 184 GVMVSHHNLLDNLNKIFTSFHMN--DETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKA 261 (590)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCC--TTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTC
T ss_pred EEEeeHHHHHHHHHHHHHhhCCC--CcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCC
Confidence 99999999999887776655543 4499999999999999975588999999999998765 88999999999999
Q ss_pred eEEEechHHHHHHHhc---cccccCCCCCeeEEEecCCCCCHHHHHHHHHhCC-----CCeEEecccCccCCCceeecCC
Q 014435 255 TVWWVVPPIILALAKN---SLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIP-----GATIFQGYGMTETCAPISLENP 326 (424)
Q Consensus 255 t~~~~~p~~~~~l~~~---~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~yG~tE~~~~~~~~~~ 326 (424)
|++.++|.++..+.+. ......+++++|.+++||+++++++.++|.+.++ +.++++.||+||++++++...+
T Consensus 262 t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~ 341 (590)
T 3kxw_A 262 TISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEPVREETMEHFYQAFKEFGFRKEAFYPCYGLAEATLLVTGGTP 341 (590)
T ss_dssp SEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCT
T ss_pred eeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCCCCHHHHHHHHHHHHHcCCCccccccccccccccceeecccC
Confidence 9999999999988775 3334567899999999999999999999999873 4589999999999887765432
Q ss_pred C-------------------------CCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------
Q 014435 327 L-------------------------VGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------ 375 (424)
Q Consensus 327 ~-------------------------~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------ 375 (424)
. .......++|+|+++ ++|+|++++++++.|+.|||+|+|+.++.||
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~ 419 (590)
T 3kxw_A 342 GSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIIDPDTLIPCDFDQVGEIWVQSNSVAKGYWNQPEE 419 (590)
T ss_dssp TSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEECTTTCCBCCTTBCEEEEEESTTSCCCBTTCHHH
T ss_pred CCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEcCCCCcCCCCCCEEEEEEeCCcccccccCChhH
Confidence 1 112344688999988 8899977799999999999999999999999
Q ss_pred ------h-------h--ccccCceEEEecCCce-------e-eEeeeeeeChhhHHHHH-hcCCCcc--cceecC
Q 014435 376 ------E-------L--TVNCNLFSYFRSNDHN-------D-FFCKLFQVAPAELEGLL-VSHPEIL--DAVVIP 424 (424)
Q Consensus 376 ------~-------~--~~~TgD~g~~~~~g~~-------d-i~~~G~~v~~~~iE~~l-~~~p~V~--~a~v~g 424 (424)
+ + ||+|||+|+++ +|.+ | |+++|++|+|.|||++| ..+|.|. +|+|++
T Consensus 420 t~~~f~~~~~~~~~g~~~~~TGDlg~~d-dG~l~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~v~~~~~~v~~ 493 (590)
T 3kxw_A 420 TRHAFAGKIKDDERSAIYLRTGDLGFLH-ENELYVTGRIKDLIIIYGKNHYPQDIEFSLMHSPLHHVLGKCAAFV 493 (590)
T ss_dssp HHHHHCBCCTTC---CCBEEEEEEEEEE-TTEEEEEEESSCHHHHHHHTTHHHHHHHHHHHSGGGGGEEEEEEEE
T ss_pred HHHHHhccccCCCCCCcEEecCcEEEEE-CCEEEEEcCccceEEECCEecCHHHHHHHHHhcCccccCccEEEEE
Confidence 1 4 99999999999 8877 3 88999999999999999 8899998 788764
No 29
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=7.6e-59 Score=456.88 Aligned_cols=377 Identities=16% Similarity=0.158 Sum_probs=276.9
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
++|||+||.++++++|+.|++.|+ +||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+
T Consensus 54 ~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~ 132 (562)
T 3ite_A 54 EDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAFAIIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFV 132 (562)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEE
Confidence 579999999999999999999999 7999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcchhhh
Q 014435 103 VPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVIL 182 (424)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 182 (424)
+++......... ....... ....+.+.+.... .........++++++|+|||||||.||+|++
T Consensus 133 ~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~ 195 (562)
T 3ite_A 133 CDNNFDGVELPP-ETKVLDT--------------KNQSFIENLSTQD--TSDILNNYPENLDAYLLYTSGSTGTPKGVRV 195 (562)
T ss_dssp CTTTTTTCCCCT-TCEEEET--------------TCHHHHHHHHHSC--CSCCCCCCCTTSEEEEEEECC---CCEEEEE
T ss_pred ccccccccccCc-cceeecc--------------cchhhhhhccccc--ccccccCCCCCCcEEEEECCCCCCCCcEEEE
Confidence 876543321111 1111110 0112222222222 1222234457889999999999999999999
Q ss_pred cHHHHHHHHHHHHhhhh------hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCCC-HHHHHHHHHHccce
Q 014435 183 THKNFIAASLMISAHQE------LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD-IEMALRAIEKYRVT 255 (424)
Q Consensus 183 t~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~-~~~~~~~i~~~~~t 255 (424)
+|+++............ ......+++++..|+.|..++. .++.++..|+++++.+.+. +..+.+.++++++|
T Consensus 196 th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t 274 (562)
T 3ite_A 196 SRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIG-EMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVT 274 (562)
T ss_dssp EHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHH-HHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCC
T ss_pred CchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHH-HHHHHHhcccEEEecchhhCHHHHHHHHHHcCCC
Confidence 99999887665544322 1123348899999999888874 6778899999999887643 57788999999999
Q ss_pred EEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCCCccCCCc
Q 014435 256 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGS 335 (424)
Q Consensus 256 ~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 335 (424)
++.++|++++.+.... .++++||.+++||+++++++.++|++.+ ++++++.||+||+++.++...... ....++
T Consensus 275 ~~~~~P~~l~~~~~~~----~~~~~lr~~~~gG~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~ 348 (562)
T 3ite_A 275 HAGIVPSLLDQTGLVP----EDAPHLVYLGVGGEKMTPRTQQIWSSSD-RVALVNVYGPTEVTIGCSAGRILP-DSDTRC 348 (562)
T ss_dssp EEEECHHHHHHHTCCG----GGSTTCCEEEEESSCCCHHHHHHHTTCS-SCEEEEEECCGGGCSCSEEEECCT-TSCTTE
T ss_pred EEEcCHHHHhhcccCc----cccCceEEEEEecCCCCHHHHHHHhhCC-CcEEEEeeccchheeeeeeeeecC-CCCCcc
Confidence 9999999988774433 3578999999999999999999999876 799999999999887666543322 345678
Q ss_pred cccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh------------hh--ccccCceEEEecCCce-------e
Q 014435 336 AGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF------------EL--TVNCNLFSYFRSNDHN-------D 394 (424)
Q Consensus 336 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy------------~~--~~~TgD~g~~~~~g~~-------d 394 (424)
+|+|+++++++|+|++++++++.|+.|||+++|+.++.|| ++ ||+|||+|++++||.+ |
T Consensus 349 ~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~dd 428 (562)
T 3ite_A 349 IGHPLGDSVAHVLAPGSNEHVKKGMAGELVIEGSLVANGYLNRPDAKGFCDINGRKMYRTGDIVRMDADSSILFLGRKDE 428 (562)
T ss_dssp EEEECTTCEEEEECTTSSCBCCTTSCEEEEEESTTSCCEESSCTTCCSEEEETTEEEEEEEEEEEECTTSCEEEEEEC--
T ss_pred ccccCCCCeEEEEeCCCCCCCCCCCceEEEEeccccchhhCCCccccccccCCCCEEEecCCEEEEcCCCeEEEEccccC
Confidence 9999999999999988899999999999999999999999 23 9999999999999987 3
Q ss_pred -eEeeeeeeChhhHHHHHhcC-CCcccceecC
Q 014435 395 -FFCKLFQVAPAELEGLLVSH-PEILDAVVIP 424 (424)
Q Consensus 395 -i~~~G~~v~~~~iE~~l~~~-p~V~~a~v~g 424 (424)
|+++|++|+|.|||++|.+| |.+.+++|++
T Consensus 429 ~Ik~~G~~v~p~eIE~~l~~~~~~~~~~~v~~ 460 (562)
T 3ite_A 429 QVKVRGQRLELGEVSEVIRSLSPTDIDVVTLL 460 (562)
T ss_dssp --------------------------------
T ss_pred EEeECcEEECHHHHHHHHHhcCCCceeEEEEE
Confidence 99999999999999999998 7787777763
No 30
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=4.4e-58 Score=489.30 Aligned_cols=383 Identities=19% Similarity=0.221 Sum_probs=315.8
Q ss_pred cCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 14 SLRPPLVL-PSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 14 ~~~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
++..++.. .+++||+||.++++++|++|++.|+++|++|+|+++|++++++++|||+++|++++|++|.++.+++.+++
T Consensus 478 p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lailkaG~~~vpldp~~p~~rl~~il 557 (1304)
T 2vsq_A 478 PDAPALTYSGQTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYML 557 (1304)
T ss_dssp TTSEEEESSSCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHH
T ss_pred CCCeEEEECCeeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHH
Confidence 44555543 45699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCC
Q 014435 93 KDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 172 (424)
Q Consensus 93 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 172 (424)
+++++++++++++....+..+......+...+. ... . .. ...+.....++++++++||||
T Consensus 558 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~-~--~~-~~~~~~~~~~~~~ayiiyTSG 617 (1304)
T 2vsq_A 558 ADSAAACLLTHQEMKEQAAELPYTGTTLFIDDQ----------------TRF-E--EQ-ASDPATAIDPNDPAYIMYTSG 617 (1304)
T ss_dssp HHHTCCEEEECSTTCTTSTTCCCCSEEEESSCG----------------GGG-G--SC-SSCCCCCCCTTSEEEEEEECC
T ss_pred HHcCCCEEEECcchhhhhhccCCCCcEEEeccc----------------ccc-c--cc-cCCCCCCCCCCCeEEEEeCCC
Confidence 999999999998765543333211111111100 000 0 00 122233456899999999999
Q ss_pred CCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC---CCHHHHHHHH
Q 014435 173 TTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAI 249 (424)
Q Consensus 173 tTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i 249 (424)
|||.||||+++|+++.+. ...... +....+++++...|++|..+.+ .++.++..|+++++.+. .++..+.+.+
T Consensus 618 STG~PKgV~~~h~~l~~~-~~~~~~--~~~~~~d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i 693 (1304)
T 2vsq_A 618 TTGKPKGNITTHANIQGL-VKHVDY--MAFSDQDTFLSVSNYAFDAFTF-DFYASMLNAARLIIADEHTLLDTERLTDLI 693 (1304)
T ss_dssp SSSSCEEEEEEHHHHHHH-HSSCCS--SCCCTTCEEEECSCTTSTHHHH-HHHHHHTTTCEEEECCGGGTTCHHHHHHHH
T ss_pred CCCCCCEEEEehHHHHHH-HHHHHh--cCCCCCCEEEEECCccHHHHHH-HHHHHHHcCCEEEECChhhcCCHHHHHHHH
Confidence 999999999999998765 222222 2223458999999999888774 78899999999999874 6899999999
Q ss_pred HHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCceeecCCCC-
Q 014435 250 EKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV- 328 (424)
Q Consensus 250 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~- 328 (424)
+++++|++.++|+++..+.+... ..+++||.+++||+++++++.++|.+.+++.+++|.||+||++..++......
T Consensus 694 ~~~~vt~~~~~p~~~~~l~~~~~---~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~ 770 (1304)
T 2vsq_A 694 LQENVNVMFATTALFNLLTDAGE---DWMKGLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDL 770 (1304)
T ss_dssp HHHTCCEEEEEHHHHHHHHHHCS---HHHHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCC
T ss_pred HHcCCcEEEccHHHHHHHHhhch---hcCCCccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCc
Confidence 99999999999999999976532 13578999999999999999999999887789999999999987666543221
Q ss_pred -CccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh-------------------hhccccCceEEEe
Q 014435 329 -GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF-------------------ELTVNCNLFSYFR 388 (424)
Q Consensus 329 -~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy-------------------~~~~~TgD~g~~~ 388 (424)
......++|+|+++++++|+| ++++++|.|+.|||+|+|+.++.|| ++||+|||+|+++
T Consensus 771 ~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~ 849 (1304)
T 2vsq_A 771 PDSISSLPIGKPISNASVYILN-EQSQLQPFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWL 849 (1304)
T ss_dssp CSSCSSCCCBEECTTEEEEEEC-TTSCBCCTTCCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEEEEEC
T ss_pred cccCCCCCCceeeCCCEEEEEC-CCcCCCCCCCceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEecCCeEEEc
Confidence 234556899999999999999 6899999999999999999999999 1389999999999
Q ss_pred cCCce------e--eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 389 SNDHN------D--FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 389 ~~g~~------d--i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+||.+ | ||++|++|+|.|||++|.+||+|++|+|++
T Consensus 850 ~dG~l~~~GR~d~qvki~G~rie~~eIE~~l~~~p~V~~a~V~~ 893 (1304)
T 2vsq_A 850 PDGTIEYAGRIDDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVA 893 (1304)
T ss_dssp TTSCEEEEEEGGGEEEETTEEEEHHHHHHHHHHSSSCCEEEEEE
T ss_pred CCCeEEEEcCCCCEEEECCEeeCHHHHHHHHHhCCCCceEEEEE
Confidence 99988 3 999999999999999999999999999974
No 31
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=6.3e-56 Score=428.54 Aligned_cols=352 Identities=18% Similarity=0.197 Sum_probs=280.0
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC---CCCHHHHHHHHHhcCCeE
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP---VYTVSELSKQVKDSNPKL 99 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~i~~~l~~~~~~~ 99 (424)
++|||+||.++++++|++|+++|+ +||+|+++++|++++++++|||+++|++++|+++ .++.+++.++++.+++++
T Consensus 57 ~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~ 135 (480)
T 3t5a_A 57 ITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAFLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVA 135 (480)
T ss_dssp EEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSE
T ss_pred EEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHHHHHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCE
Confidence 679999999999999999999996 9999999999999999999999999999999999 778999999999999999
Q ss_pred EEEcccchHHHhcCCCCeEEEecCCCccccccccCCCcccchhhhhhccCCCCCCCCCCCCCCCEEEEecCCCCCCCcch
Q 014435 100 VITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKG 179 (424)
Q Consensus 100 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 179 (424)
+|++++....+.......... ....+..++....... .........++++++|+|||||||.||+
T Consensus 136 vi~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKg 200 (480)
T 3t5a_A 136 ILTTSSAVDDVVQHVARRPGE-------------SPPSIIEVDLLDLDAP--NGYTFKEDEYPSTAYLQYTSGSTRTPAG 200 (480)
T ss_dssp EEECTTTHHHHHHTCC-------------------CCEEEEGGGSCTTCC-----CCCCSSCCSEEEEECC------CCC
T ss_pred EEeChhHHHHHHHHHhccccc-------------cccceeEecccccccc--cCCCCCCCCCCceEEEEecCCCCCCCcE
Confidence 999998877666543211000 0001111111111111 1223344568899999999999999999
Q ss_pred hhhcHHHHHHHHHHHHhhhhhcc----CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCC----CHHHHHHHHHH
Q 014435 180 VILTHKNFIAASLMISAHQELVG----ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKF----DIEMALRAIEK 251 (424)
Q Consensus 180 v~~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 251 (424)
|+++|+++...+........... ..++++++.+|++|.+|+...++.++..|+++++.++. ++..+++.+++
T Consensus 201 V~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~ 280 (480)
T 3t5a_A 201 VVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMAS 280 (480)
T ss_dssp EEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEEEEECCCTTSTTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTS
T ss_pred EEEeHHHHHHHHHHHHHHhccccccCCCCCCeEEEeCCCcCccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHh
Confidence 99999999888776665554433 11599999999999999877789999999999998753 89999999999
Q ss_pred ccceEEEechHHHHHHHhc----cccccCCCCCeeEEEecCCCCCHHHHHHHHHhC-----CCCeEEecccCccCCCcee
Q 014435 252 YRVTVWWVVPPIILALAKN----SLVRKFDISSLKLVGSGAAPLGKELMEDCQKNI-----PGATIFQGYGMTETCAPIS 322 (424)
Q Consensus 252 ~~~t~~~~~p~~~~~l~~~----~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~yG~tE~~~~~~ 322 (424)
+++| +.++|+++..++.. ......++++||.+++||+++++++.++|.+.+ +++.+++.||+||+++.++
T Consensus 281 ~~~t-~~~~p~~~~~l~~~~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~ 359 (480)
T 3t5a_A 281 DFHA-FSAAPNFAFELAARRTTDDDMAGRDLGNILTILSGSERVQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVA 359 (480)
T ss_dssp SSEE-EEEECHHHHHHHHHHCCTGGGTTCCCTTCCEEEECCTTCCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEE
T ss_pred hcee-EeeChHHHHHHHHhhcCcccccccchhhhheeeecCCcCCHHHHHHHHHHHhhcCCChhhccccccccccceeEe
Confidence 9999 88899988887764 333456789999999999999999999999988 3468999999999988777
Q ss_pred ecCCCCC-----------------------ccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhh----
Q 014435 323 LENPLVG-----------------------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVF---- 375 (424)
Q Consensus 323 ~~~~~~~-----------------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy---- 375 (424)
....... .....++|+|++ ++++|+|++++++++.|+.|||+|+|+.++.||
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~-~~~~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~p 438 (480)
T 3t5a_A 360 TSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRS-PIVRIVDSDTCIECPDGTVGEIWVHGDNVANGYWQKP 438 (480)
T ss_dssp ECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSS-SEEEEEETTTTEECCTTBCEEEEEESTTSCCCBTTBH
T ss_pred ecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccC-CEEEEEcCCCCcCCCCCCEEEEEEeCCccccccccCc
Confidence 6543311 134458999999 999999977799999999999999999999999
Q ss_pred -------h-------------hccccCceEEEecCCce
Q 014435 376 -------E-------------LTVNCNLFSYFRSNDHN 393 (424)
Q Consensus 376 -------~-------------~~~~TgD~g~~~~~g~~ 393 (424)
. +||+|||+|+++ ||.+
T Consensus 439 e~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~d-dG~l 475 (480)
T 3t5a_A 439 DESERTFGGKIVTPSPGTPEGPWLRTGDSGFVT-DGKM 475 (480)
T ss_dssp HHHHHHHCBCCSSCCTTCCCCCBEEEEEEEEEE-TTEE
T ss_pred chhHHHHhhhhccccCCCCCCCeeeccceeeEE-CCEE
Confidence 0 299999999996 8876
No 32
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=100.00 E-value=3.5e-41 Score=320.96 Aligned_cols=260 Identities=18% Similarity=0.229 Sum_probs=217.9
Q ss_pred CCC-CCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhh-hccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEe
Q 014435 159 VKQ-TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE-LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 236 (424)
Q Consensus 159 ~~~-~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 236 (424)
..+ +++++++|||||||.||+|+++|+++............ .....+++++...|+.|..+....++.++..|+++++
T Consensus 82 ~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 161 (436)
T 3qov_A 82 GDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVP 161 (436)
T ss_dssp SCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEEC
T ss_pred CCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEe
Confidence 345 88999999999999999999999999876655543332 2233459999999987766665677888999999999
Q ss_pred cCCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCC--CCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccC
Q 014435 237 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFD--ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGM 314 (424)
Q Consensus 237 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~--~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~ 314 (424)
.+..++..+++.++++++|+++++|+++..|++.......+ ++++|.+++||+++++++.+++++.| ++++++.||+
T Consensus 162 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG~ 240 (436)
T 3qov_A 162 AAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEPHTDEQRRKIERML-NVKAYNSFGM 240 (436)
T ss_dssp CCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCcCCHHHHHHHHHHh-CccEEecCcc
Confidence 98889999999999999999999999999998876554443 78999999999999999999999998 7999999999
Q ss_pred ccCCCc-eeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhhhhccccCceEEEecCC--
Q 014435 315 TETCAP-ISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSND-- 391 (424)
Q Consensus 315 tE~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~g-- 391 (424)
||+++. +....+ .....+.|.++++++|+|++++++++.|+.|||+++|..-.....+||+|||+|+++++|
T Consensus 241 TE~~~~~~~~~~~-----~~~g~~~~~~~~~v~i~d~~~g~~~~~g~~Gel~v~~~~~~~~~~~~y~TGDl~~~~~~gc~ 315 (436)
T 3qov_A 241 TEMNGPGVAFECQ-----EQNGMHFWEDCYLVEIIDPETGEPVPEGEIGELVLTTLDREMMPLIRYRTRDLTRILPGKCP 315 (436)
T ss_dssp GGGTEEEEEEECT-----TCSSEEECTTTEEEEEECTTTCSBCSTTCCEEEEEEESSCCSSCCCSEEEEEEECEECSCCT
T ss_pred hhhcCCeeEEecC-----CCCeeEEccCceEEEEEECCCCCCCCCCCceEEEEeccCcCCceEEEEEcCCEEEEcCCCCC
Confidence 998554 333321 122367777899999999889999999999999999965433337899999999999997
Q ss_pred ----c---e-------e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 392 ----H---N-------D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 392 ----~---~-------d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
. + | |+++|++|+|.+||++|.+||+|.+++|++
T Consensus 316 cG~~~~~il~i~GR~dd~ik~~G~~v~p~eiE~~l~~~p~v~~~~vv~ 363 (436)
T 3qov_A 316 CGRTHLRIDRIKGRSDDMFIIKGVNIFPMQVEKILVQFPELGSNYLIT 363 (436)
T ss_dssp TCCCSCEECCCCCBSSSCEEETTEEECHHHHHHHHTTCTTEEEEEEEE
T ss_pred CCCCccccCcccCccCCEEEECCEEECHHHHHHHHHhCcCcCCcEEEE
Confidence 3 2 3 999999999999999999999999998874
No 33
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=6.8e-41 Score=309.32 Aligned_cols=239 Identities=18% Similarity=0.216 Sum_probs=201.8
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCCC
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKF 240 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 240 (424)
.+++++|+|||||||.||+|++||+++.+.+........... ++++++.+|++|.+|+. .++.++..|+++++.++.
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~--~d~~l~~~pl~h~~gl~-~~~~~l~~g~~~~~~~~~ 112 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGP--GTRALVCLNVGYIAGLM-MLVRGMELDWELTVTEPT 112 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCT--TCEEEECSCTTSHHHHH-HHHHHHHHTCEEEEECCC
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCC--CCEEEEECChHHHHHHH-HHHHHHHhCcEEEecCcc
Confidence 377899999999999999999999999988877766655543 49999999999999995 677788888888877542
Q ss_pred CHHHHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccCccCCCc
Q 014435 241 DIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAP 320 (424)
Q Consensus 241 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 320 (424)
.+.++.++++++|++.++|+++..|++.... ..++++||.+++||+++++++.+++++. ++++++.||+||+++.
T Consensus 113 --~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~~-~~~l~~lr~v~~gG~~l~~~~~~~~~~~--~~~~~~~YG~TEt~~~ 187 (358)
T 4gs5_A 113 --ANPLAGLDHADFDFVAMVPMQLQSILENSAT-SGQVDRLGKVLLGGAPVNHALAMQISDL--AMPVYQSYGMTETVSH 187 (358)
T ss_dssp --SCTTTTCSSCCCSEEEECHHHHHHHHHCTTT-GGGGGGGCSEEECSSCCCHHHHHHHHTC--SSCEEEEEECGGGSSE
T ss_pred --ccHHHHHHHhCCeEEEcChHHHHHhhccccc-cccCCcceEEEEcccCCCchheeccccc--CceEEeccccccccce
Confidence 2246778899999999999999999887653 3368899999999999999999999875 7999999999999887
Q ss_pred eeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhhhhccccCceEEEecCCce------e
Q 014435 321 ISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSNDHN------D 394 (424)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~g~~------d 394 (424)
++..... ....+.+|.+.|++++.+.+ .||++++|+... ++||+|||+|++++||.+ |
T Consensus 188 ~~~~~~~--~~~~g~~~~~~pgv~~~~~~-----------~Gel~~~g~~~~---~g~~~TGDlg~~d~~g~~~~GR~dd 251 (358)
T 4gs5_A 188 VALKALN--GPEASELYVFLPGIQYGVDE-----------RGCLHISGAVTN---GQTVQTNDLVEIHGNAFQWIGRADN 251 (358)
T ss_dssp EEEEECS--STTCCSCEEECTTCEEEECT-----------TSEEEEESGGGT---TCCEEEEEEEEECSSEEEEEEEGGG
T ss_pred eeccccc--ccccceeeccCCCeEEEecC-----------cCceEEeccccc---CcceecCCccccccCceEEcccccC
Confidence 7765544 45667899999999888754 399999997643 479999999999999854 3
Q ss_pred -eEeeeeeeChhhHHHHH---hcCCCcccceec
Q 014435 395 -FFCKLFQVAPAELEGLL---VSHPEILDAVVI 423 (424)
Q Consensus 395 -i~~~G~~v~~~~iE~~l---~~~p~V~~a~v~ 423 (424)
|+++|++|+|.|||++| .+||.|.+|+|+
T Consensus 252 ~Ik~~G~~v~p~eIE~~l~~~~~~p~V~~a~vv 284 (358)
T 4gs5_A 252 VINSGGVKIVLDQIDQRIAAVFHHLNIGNAFFC 284 (358)
T ss_dssp EEEETTEEEEHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred eEEECCEEECHHHHHHHHHHhccCCCccEEEEE
Confidence 99999999999999877 468999999886
No 34
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=100.00 E-value=2.6e-39 Score=308.13 Aligned_cols=261 Identities=19% Similarity=0.231 Sum_probs=212.3
Q ss_pred CCCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhh-hhccCCCcEEEEecch-HHHHHHHHHHHHHhhcCceEE
Q 014435 158 SVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ-ELVGELDHVVLCVLPM-FHVFGLSVILYDQLQKGNCVV 235 (424)
Q Consensus 158 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~-~~~~g~~~~~~~~l~~G~~~~ 235 (424)
...++++++++|||||||.||+|+++|+++........... ......+++++..+|+ +|..++. ..+.++..|++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~ 164 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLG-AHYGAERAGLTVI 164 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHH-HHHHHHHTTCEEE
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchH-HHHHHHHcCCEEE
Confidence 34568899999999999999999999999877655443322 1222345899999998 6777764 6778899999999
Q ss_pred ecCCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCC--CCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEeccc
Q 014435 236 SMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFD--ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYG 313 (424)
Q Consensus 236 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~--~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG 313 (424)
+.+.+++..+++.++++++|+++++|+++..|++.......+ ++++|.+++||+++++++.+++++.+ ++++++.||
T Consensus 165 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG 243 (437)
T 2y27_A 165 PFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRM-GIDAVDIYG 243 (437)
T ss_dssp CCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEEE
T ss_pred eCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCccCCHHHHHHHHHHH-CcCEEecCC
Confidence 888889999999999999999999999999998765433333 47999999999999999999999888 799999999
Q ss_pred CccCCCc-eeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhhhhccccCceEEEec-CC
Q 014435 314 MTETCAP-ISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRS-ND 391 (424)
Q Consensus 314 ~tE~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~-~g 391 (424)
+||+++. +....+. .....+.+.++++++|+|++++++++.|+.|||+++|..-...-.+||+|||+|++++ +|
T Consensus 244 ~TE~~g~~~~~~~~~----~~~g~~~~~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~t~~~~~~~~y~TGDl~~~~~~~G 319 (437)
T 2y27_A 244 LSEVMGPGVASECVE----TKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSLTKEALPIIRYRTRDLTRLLPGTA 319 (437)
T ss_dssp ETTTTEEEEEECCTT----TCSSCEECTTTEEEEEECTTTCCBCCTTCCEEEEEEESSCSSSCCCSEEEEEEECEECCSS
T ss_pred chhhcCCeeEEecCC----CCCceeEccCceEEEEEcCCCCCCCCCCCccEEEEecCCcCCchhheeecCCEEEEeCCCC
Confidence 9998443 4433322 1112566778999999998789999999999999998542211268999999999998 58
Q ss_pred c-------e-----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 392 H-------N-----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 392 ~-------~-----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+ + | ++++|++|+|.+||++|.+||+|.+++|++
T Consensus 320 ~~~~~i~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~V~~~~vv~ 365 (437)
T 2y27_A 320 RTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQLLKQRALAPHYQIV 365 (437)
T ss_dssp SSSCEECCCCEEGGGCEEETTEEECHHHHHHHHTTCTTBCSCCEEE
T ss_pred CCccccCccccccCCeEEECCeEECHHHHHHHHHhCcCcCccEEEE
Confidence 6 2 3 889999999999999999999999888763
No 35
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=100.00 E-value=3.1e-39 Score=308.15 Aligned_cols=260 Identities=20% Similarity=0.231 Sum_probs=211.2
Q ss_pred CCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhh-hhccCCCcEEEEecch-HHHHHHHHHHHHHhhcCceEEe
Q 014435 159 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ-ELVGELDHVVLCVLPM-FHVFGLSVILYDQLQKGNCVVS 236 (424)
Q Consensus 159 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~-~~~~g~~~~~~~~l~~G~~~~~ 236 (424)
..++++++++|||||||.||+|.++|+++........... ......+++++..+|+ +|..++ ...+.++..|+++++
T Consensus 89 ~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~~~~~G~~~~~ 167 (443)
T 2y4o_A 89 VPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGL-GIHYGAERLGCMVVP 167 (443)
T ss_dssp SCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHH-HHHHHHHHHTCEEEC
T ss_pred CChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHH-HHHHHHHHcCCEEEE
Confidence 4568899999999999999999999999877655443322 1222345899999998 566666 367788899999999
Q ss_pred cCCCCHHHHHHHHHHccceEEEechHHHHHHHhccccccCC--CCCeeEEEecCCCCCHHHHHHHHHhCCCCeEEecccC
Q 014435 237 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFD--ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGM 314 (424)
Q Consensus 237 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~--~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yG~ 314 (424)
.+.+++..+++.++++++|+++++|+++..|++.......+ ++++|.+++||+++++++.+++++.+ ++++++.||+
T Consensus 168 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG~ 246 (443)
T 2y4o_A 168 MSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEPWTQALRNEVETRV-GIDALDIYGL 246 (443)
T ss_dssp CCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHH-TCEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCcCCHHHHHHHHHHh-CcCEEeccCc
Confidence 88889999999999999999999999999998765433333 47999999999999999999999988 7999999999
Q ss_pred ccCCCc-eeecCCCCCccCCCccccccCCcEEEEeeCCCCccCCCCCceeEEEecCCcchhhhhccccCceEEEecC-Cc
Q 014435 315 TETCAP-ISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSN-DH 392 (424)
Q Consensus 315 tE~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~-g~ 392 (424)
||+++. +....+. .....+.+.++++++|+|++++++++.|+.|||+++|..-...-.+||+|||+|+++++ |+
T Consensus 247 TE~~g~~~~~~~~~----~~~g~~~~~~~~~~~i~d~~~g~~~~~G~~Gel~v~~~t~~~~p~~~y~TGDl~~~~~~cG~ 322 (443)
T 2y4o_A 247 SEVMGPGVACECVE----TKDGPVIWEDHFYPEIIDPVTGEVLPDGSQGELVFTSLTKEAMPVIRYRTRDLTALLPPTAR 322 (443)
T ss_dssp TTTTEEEEEEECTT----TCCSEEECTTTEEEEEECTTTCCBCCTTCCEEEEEEESSCSSSCCSSEEEEEEECEECCSSS
T ss_pred hhhcCCeEEeccCC----CCCceEEccCCeEEEEEcCCCCCCCCCCCceEEEEeCCCcccChhheeecCCEEEEcCCCCC
Confidence 997543 3333221 11125556789999999987899999999999999985422112679999999999998 85
Q ss_pred -------e-----e-eEeeeeeeChhhHHHHHhcCCCcccceecC
Q 014435 393 -------N-----D-FFCKLFQVAPAELEGLLVSHPEILDAVVIP 424 (424)
Q Consensus 393 -------~-----d-i~~~G~~v~~~~iE~~l~~~p~V~~a~v~g 424 (424)
+ | |+++|++|+|.+||++|.+||+|.+++|++
T Consensus 323 ~~~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~V~~~~vv~ 367 (443)
T 2y4o_A 323 AMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALPLLSGQFQIT 367 (443)
T ss_dssp SSCEECCCCEESSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEE
T ss_pred CccccCccccccCCeEEECCEEECHHHHHHHHHhCcCcCccEEEE
Confidence 2 3 899999999999999999999999888763
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.98 E-value=3e-32 Score=253.55 Aligned_cols=222 Identities=16% Similarity=0.089 Sum_probs=177.5
Q ss_pred CCCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhh-ccCCCcEEEEecch-HHHHHHHHHHHHHhhcCceEEe
Q 014435 159 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL-VGELDHVVLCVLPM-FHVFGLSVILYDQLQKGNCVVS 236 (424)
Q Consensus 159 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~-~~~~g~~~~~~~~l~~G~~~~~ 236 (424)
..++++++++|||||||.||+|.++|+++............. ....++++++.+|+ +|..|+. ..+.++..|+ +++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~-~~~~~~~~G~-~v~ 165 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAI-NKERALRLGG-MFF 165 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHH-HHHHHHHTTS-CEE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHH-HHHHHHHcCC-EEE
Confidence 467889999999999999999999999998887654322222 22344899999999 9999986 4555588888 566
Q ss_pred cCCCCHH-----------------------HHHHHHHHccceEEEechHHHHHHHhccccccCCCCCeeEEEecCCCCCH
Q 014435 237 MGKFDIE-----------------------MALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGK 293 (424)
Q Consensus 237 ~~~~~~~-----------------------~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~g~~~~~ 293 (424)
+..+++. .+++.++++++|++.++|+++..|++.......+++++|.+++||+++++
T Consensus 166 ~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~ 245 (369)
T 3hgu_A 166 SIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNL 245 (369)
T ss_dssp CCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHHHHHHHHHHCSEEEEESSCCCH
T ss_pred CccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhhhhccccCCeeEEEECCccCCH
Confidence 6667777 88889999999999999999999998755444557899999999999999
Q ss_pred HHHHHHH-HhCCCCeEEecccCccCCCceeecCCCCCccCCCccccc------cCCcEEEEeeCCCCccCCCCCceeEEE
Q 014435 294 ELMEDCQ-KNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTL------VAGVEAQIVSVDTLKPLPPNQLGEIWV 366 (424)
Q Consensus 294 ~~~~~~~-~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~------~~~~~~~i~d~~~~~~~~~g~~Gel~v 366 (424)
++.++++ +.||++++++.||+||+++++... +. .++|+| .++++++|+|++++++++.|+.|||++
T Consensus 246 ~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~-~~------~~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~G~~GEl~v 318 (369)
T 3hgu_A 246 DEIKFIASEILPDCEFSASYGSTSALGVSRSL-LI------TSESQQVIYDSFSPFITYDVVDSITAQTVEYGERGNVIV 318 (369)
T ss_dssp HHHHHHHHHTCTTSEEEEEEEEGGGTEEEEEC-CB------CTTCSSCEEECCTTTEEEEEECTTTCSBCCTTCEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEcccCchhhhcceecc-cc------ccCCCcccccCCCCCeEEEEECCCCCcCCCCCCceEEEE
Confidence 9999999 899889999999999988655332 11 157888 999999999977999999999999999
Q ss_pred ecCCcchhhhhccccCceEEEecC
Q 014435 367 RGPNVTPVFELTVNCNLFSYFRSN 390 (424)
Q Consensus 367 ~~~~~~~gy~~~~~TgD~g~~~~~ 390 (424)
++..-... -.+|+|||++.+.+.
T Consensus 319 t~l~~~~~-l~ry~tgD~~~~~~~ 341 (369)
T 3hgu_A 319 THLSPWAF-YPRVAERDTAIRLPG 341 (369)
T ss_dssp EEEETTEE-EEEEEEEEEEEEECC
T ss_pred EEcCcccc-cccccCCceEEEecC
Confidence 98532221 356899999988653
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=98.36 E-value=1.4e-06 Score=83.36 Aligned_cols=125 Identities=12% Similarity=0.033 Sum_probs=77.7
Q ss_pred CCCee---EEEecCCCCCHHHHHHHHHhCCCCeEE-ecccCccCCCceeecCCCCCccCCCcccc-ccCC-cEEEEeeCC
Q 014435 278 ISSLK---LVGSGAAPLGKELMEDCQKNIPGATIF-QGYGMTETCAPISLENPLVGVRRSGSAGT-LVAG-VEAQIVSVD 351 (424)
Q Consensus 278 ~~~lr---~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~ 351 (424)
+++++ .+..||. ..-...++..+++.+++ ..|++||+ .+.....+. ..+...+. .+++ +-.+.++.+
T Consensus 296 WPnl~~l~~~~~G~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg-~~gi~~~p~---~~~~~~~~~L~~~~~ffEFip~~ 368 (581)
T 4eql_A 296 WPNTKYIETVVTGSM---GQYVPMLNYYCNDLPLVSTTYGSSET-TFGINLDPL---CKPEDVSYTFMPNMSYFEFIPMD 368 (581)
T ss_dssp STTCCEEEEECSGGG---GGGHHHHHHHHTTCCEECCEEECSSC-EEEECSCTT---SCGGGCCEEECTTSSEEEEEECS
T ss_pred CCCCcEEEEEcCCCh---HHHHHHHHHHcCCCccccCccccccc-eeeeccCCC---CCcccCceeecCCcEEEEEEecc
Confidence 57744 4555662 44445566656677887 89999994 333322221 11112222 2222 344555532
Q ss_pred C--------CccCCCCCceeEEEecCCcchhhhhccccCceEEEec--CC--ce-------e-eEeeeeeeChhhHHHHH
Q 014435 352 T--------LKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRS--ND--HN-------D-FFCKLFQVAPAELEGLL 411 (424)
Q Consensus 352 ~--------~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~--~g--~~-------d-i~~~G~~v~~~~iE~~l 411 (424)
+ ...+..|+.+||+++... | --+|++||+.++.. +. ++ | +++.|+++++.+||++|
T Consensus 369 ~~~~~~~v~l~eVe~G~~YelViTt~~---G-L~RYr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~Gekl~~~~v~~al 444 (581)
T 4eql_A 369 GGDKNDVVDLEDVKLGCTYEPVVTNFA---G-LYRMRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNEEDLFKAV 444 (581)
T ss_dssp TTCCSSCEEGGGCCTTCEEEEEEECSS---S-CCSEECCEEEEEEEEETTEEEEEEEEETTEEECSSSCCEEHHHHHHHH
T ss_pred ccCCCcEeCHHHcCCCceEEEEEeecc---c-eeeEEcCCEEEEcccCCCCcEEEEEEecCCEEEeeeeECCHHHHHHHH
Confidence 2 134579999999999864 2 23579999999875 33 22 3 88899999999999999
Q ss_pred hc
Q 014435 412 VS 413 (424)
Q Consensus 412 ~~ 413 (424)
.+
T Consensus 445 ~~ 446 (581)
T 4eql_A 445 SQ 446 (581)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 38
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=98.25 E-value=4.8e-06 Score=79.95 Aligned_cols=125 Identities=11% Similarity=0.030 Sum_probs=76.5
Q ss_pred CCCeeE---EEecCCCCCHHHHHHHHHhCCCCeEE-ecccCccCCCceeecCCCCCccCCCcccc-ccCC-cEEEEeeCC
Q 014435 278 ISSLKL---VGSGAAPLGKELMEDCQKNIPGATIF-QGYGMTETCAPISLENPLVGVRRSGSAGT-LVAG-VEAQIVSVD 351 (424)
Q Consensus 278 ~~~lr~---~~~~g~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~ 351 (424)
++++|+ +..||. ......++..+++..++ ..|++||+ .+.....+. ..++..+. .+|+ +-.+.++.+
T Consensus 301 WPnlk~l~~~~tG~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg-~~gi~~~p~---~~p~~~~~~L~p~~~ffEFIP~~ 373 (609)
T 4b2g_A 301 WPNTKYLDVIVTGAM---AQYIPTLDYYSGGLPLACTMYASSEC-YFGLNLNPM---SKPSEVSYTIMPNMAYFEFLPHE 373 (609)
T ss_dssp STTCCEEEEECSGGG---GGGHHHHHHHHTSCCEECCEEECSSC-EEEECSCTT---SCGGGCCEEECTTSCEEEEEEGG
T ss_pred CCCCcEEEEEccCCh---HHHHHHHHHHcCCCccccCcccccce-eeeeecCCC---CCcccCceeecCCcEEEEEEecc
Confidence 577554 445552 34445555555667777 89999994 333322221 11111222 2223 334555432
Q ss_pred C---------------CccCCCCCceeEEEecCCcchhhhhccccCceEEEec--C--Cce-------e-eEeeeeeeCh
Q 014435 352 T---------------LKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRS--N--DHN-------D-FFCKLFQVAP 404 (424)
Q Consensus 352 ~---------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~--~--g~~-------d-i~~~G~~v~~ 404 (424)
+ ...+..|+.+||+++... | --.|++||+.+++. + .++ | +++.|+++++
T Consensus 374 ~~~~~~~~~~~~~~v~l~eVe~G~~YelViTt~~---G-L~RYr~GD~v~v~~f~~~~p~i~~~gR~~~~l~~~Geki~~ 449 (609)
T 4b2g_A 374 HSSIPLSRDSPPRLVDLAHVEVGKEYELVITTYA---G-LYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDE 449 (609)
T ss_dssp GTTSCCCSSSCCCCEEGGGCCTTCEEEEEEECTT---S-CCSEEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCH
T ss_pred ccccccccCCCCccccHhHcCCCCeEEEehhhhh---h-hhheecCCEEEEeecCCCCcEEEEEEecCCeEEccccCCCH
Confidence 2 135689999999998753 2 13479999999874 3 223 3 8889999999
Q ss_pred hhHHHHHhc
Q 014435 405 AELEGLLVS 413 (424)
Q Consensus 405 ~~iE~~l~~ 413 (424)
.+||+++.+
T Consensus 450 ~~v~~av~~ 458 (609)
T 4b2g_A 450 AELQKAVDN 458 (609)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999963
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=98.03 E-value=1.6e-05 Score=75.93 Aligned_cols=126 Identities=10% Similarity=0.003 Sum_probs=76.0
Q ss_pred CCCeeEE--EecCCCCCHHHHHHHHHhCCCCeEE-ecccCccCCCceeecCCCCCccCCCcccc-ccCC-cEEEEeeCCC
Q 014435 278 ISSLKLV--GSGAAPLGKELMEDCQKNIPGATIF-QGYGMTETCAPISLENPLVGVRRSGSAGT-LVAG-VEAQIVSVDT 352 (424)
Q Consensus 278 ~~~lr~~--~~~g~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~~ 352 (424)
++++|++ +.+|. + ......++..+++.+++ ..|++||+ .+.....+. ..++..+. .+|+ +-.+.++.++
T Consensus 301 WPnl~~i~~~~~G~-~-~~Y~~~l~~~~g~~p~~~~~Y~ASEg-~~gi~~~p~---~~~~~~~~~L~p~~~ffEFiP~~~ 374 (581)
T 4epl_A 301 FPNAKYVYGIMTGS-M-EPYVPKLRHYAGDLPLVSHDYGSSEG-WIAANVTPR---LSPEEATFAVIPNLGYFEFLPVSE 374 (581)
T ss_dssp CTTCCCEEEECSGG-G-GGGHHHHHHHHTTSCEEECCEEETTE-EEEECCCTT---SCTTTCCEEECTTSCEEEEEEC--
T ss_pred CCCCceEEEEeCCC-h-HHHHHHHHHHcCCCccccCceeccce-eeeeecCCC---CCccccceeecCCcEEEEEEeccc
Confidence 6778643 34442 2 33445566555677777 89999994 333322222 11112222 2233 2334443221
Q ss_pred ----------CccCCCCCceeEEEecCCcchhhhhccccCceEEEecC--C--ce-------e-eEeeeeeeChhhHHHH
Q 014435 353 ----------LKPLPPNQLGEIWVRGPNVTPVFELTVNCNLFSYFRSN--D--HN-------D-FFCKLFQVAPAELEGL 410 (424)
Q Consensus 353 ----------~~~~~~g~~Gel~v~~~~~~~gy~~~~~TgD~g~~~~~--g--~~-------d-i~~~G~~v~~~~iE~~ 410 (424)
...+..|+.+||+++... | --.|++||+.++..- . ++ + +++.|+++++.+||++
T Consensus 375 ~~~~~~~~v~l~eve~G~~YelviTt~~---G-L~RYr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~~Ge~~~~~~v~~a 450 (581)
T 4epl_A 375 TGEGEEKPVGLTQVKIGEEYEVVITNYA---G-LYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLS 450 (581)
T ss_dssp -----CCCEEGGGCCTTCEEEEEEESTT---S-CSSEEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHHHHH
T ss_pred ccCCCCceeeHHHcCCCCeEEEEEeecc---c-eeeEEcCCEEEEecccCCCcEEEEEeecCCeEEeeeeECCHHHHHHH
Confidence 145689999999999864 2 235799999998742 1 22 3 8889999999999999
Q ss_pred Hhc
Q 014435 411 LVS 413 (424)
Q Consensus 411 l~~ 413 (424)
+.+
T Consensus 451 l~~ 453 (581)
T 4epl_A 451 VES 453 (581)
T ss_dssp HHH
T ss_pred HHH
Confidence 964
No 40
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=94.22 E-value=0.26 Score=45.89 Aligned_cols=86 Identities=13% Similarity=0.100 Sum_probs=70.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+..++..+...|+.++|++....|.+. ..+...++++..|+.+++.+.. +.+.+...+++.++++++.
T Consensus 110 ~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l~~ 188 (437)
T 2y27_A 110 YTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGG-QTEKQVQLIQDFRPDIIMV 188 (437)
T ss_dssp ECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCCSC-CHHHHHHHHHHHCCSEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCCCC-CHHHHHHHHHHhCCCEEEE
Confidence 699999888888888787889999999999888643 2344578889999999987654 7889999999999999999
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 189 ~Ps~~~~l~ 197 (437)
T 2y27_A 189 TPSYMLSIA 197 (437)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 887665543
No 41
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=93.97 E-value=0.28 Score=45.76 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=70.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+..++..+...|+.++|++....|-+. ..+...++++..|+.+++.+.. ..+.+...+++.++++++.
T Consensus 112 ~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l~~ 190 (443)
T 2y4o_A 112 YTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGG-QTEKQVQLIRDFEPKIILV 190 (443)
T ss_dssp ECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHCCSEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCCC-CHHHHHHHHHHhCCcEEEE
Confidence 699999888888888887889999999999888643 2345678889999999988664 7888999999999999999
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 191 ~Ps~~~~l~ 199 (443)
T 2y4o_A 191 TPSYMLNLI 199 (443)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 887665543
No 42
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=93.85 E-value=0.27 Score=45.77 Aligned_cols=86 Identities=16% Similarity=0.079 Sum_probs=70.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+..++..+...|+.++|++....|-+ ...+..+++++..|+.+++.++. .++.+...+++.++++++.
T Consensus 106 ~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~i~~~~~t~~~~ 184 (436)
T 3qov_A 106 HSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAG-NSKRQIKFISDFKTTALHA 184 (436)
T ss_dssp EEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHTCCEEEC
T ss_pred ECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCC-CHHHHHHHHHHHCCCEEEE
Confidence 79999998888888888888999999999988754 33445678889999999987654 7788999999999999999
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 185 ~P~~~~~l~ 193 (436)
T 3qov_A 185 IPSYAIRLA 193 (436)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 887665543
No 43
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=85.61 E-value=1.8 Score=39.11 Aligned_cols=86 Identities=9% Similarity=0.144 Sum_probs=63.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc--HHHHHHHHHHhCCeEecCCCCCCHH----------------
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVS---------------- 86 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~---------------- 86 (424)
+|.+.+...+..++..+...|+.++|++....|-+.. -+...++++..|+.+++.+ ..+.
T Consensus 111 ~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~~--~dp~~~~~~~~~~~~~~~~~ 188 (369)
T 3hgu_A 111 AYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSID--IDPRWVKRSLSEGDTATVRK 188 (369)
T ss_dssp ECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECCC--CCHHHHHHHHHTTCHHHHHH
T ss_pred ECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECcc--CChHHHHHhhcccchhhhHH
Confidence 6888888888777777778899999999999887333 2344555688999655543 3444
Q ss_pred -------HHHHHHHhcCCeEEEEcccchHHHhc
Q 014435 87 -------ELSKQVKDSNPKLVITVPELWDKVKD 112 (424)
Q Consensus 87 -------~i~~~l~~~~~~~ii~~~~~~~~~~~ 112 (424)
.+...+++.++.+++..+.....+..
T Consensus 189 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~ 221 (369)
T 3hgu_A 189 YTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLK 221 (369)
T ss_dssp HHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHh
Confidence 66678999999999998877665543
No 44
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=82.47 E-value=5.8 Score=37.40 Aligned_cols=84 Identities=13% Similarity=0.161 Sum_probs=64.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|.+.+...+..... ..++.++|++...+|-...+ +..+++++..|+..+..+ ..+++.+...+++.+++++...
T Consensus 183 ~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 258 (501)
T 3ipl_A 183 QTFRNHYASAIGCKE---SLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVD-KFNAEQILTMIKNERITHISLV 258 (501)
T ss_dssp EEHHHHHHHHHHHHH---HTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-SCCHHHHHHHHHHSCCCEEEEC
T ss_pred EeHHHHHHHHHHHHH---hhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCC-CCCHHHHHHHHHHcCCcEEEch
Confidence 688888776655543 45889999999888875433 334677888999988875 4688999999999999999998
Q ss_pred ccchHHHhc
Q 014435 104 PELWDKVKD 112 (424)
Q Consensus 104 ~~~~~~~~~ 112 (424)
+..+..+..
T Consensus 259 P~~~~~l~~ 267 (501)
T 3ipl_A 259 PQTLNWLMQ 267 (501)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 877665543
No 45
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=82.03 E-value=3.5 Score=39.52 Aligned_cols=86 Identities=15% Similarity=0.133 Sum_probs=64.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHH--HHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP--ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+......+...++.++|++....|-...+- ..+++++ .|+..+..+ ..+++.+...+++.++++++.
T Consensus 212 ~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 289 (548)
T 2d1s_A 212 LTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT-KFDEETFLKTLQDYKCTSVIL 289 (548)
T ss_dssp EEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC-CCCHHHHHHHHHHTTEEEEEE
T ss_pred ecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC-CCCHHHHHHHHHHcCCcEEEe
Confidence 788888776655544333357889999888888764443 3356777 999988775 568899999999999999999
Q ss_pred cccchHHHhc
Q 014435 103 VPELWDKVKD 112 (424)
Q Consensus 103 ~~~~~~~~~~ 112 (424)
.+..+..+..
T Consensus 290 ~P~~~~~l~~ 299 (548)
T 2d1s_A 290 VPTLFAILNK 299 (548)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 8887766543
No 46
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=80.66 E-value=8.1 Score=36.84 Aligned_cols=82 Identities=13% Similarity=0.132 Sum_probs=63.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHH---HHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI---CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~---~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
+|.+.+...+..... ..++.++|++....|-+..+-. .+++++..|+..+..+ ...++.+...+++.+++++.
T Consensus 202 ~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 277 (539)
T 1mdb_A 202 RTHDDYIYSLKRSVE---VCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSP-SPSPDDAFPLIEREKVTITA 277 (539)
T ss_dssp EEHHHHHHHHHHHHH---HHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECS-SSSHHHHHHHHHHHTCSEEE
T ss_pred EehHHHHHHHHHHHH---hhCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEECC-CCCHHHHHHHHHHcCCeEEE
Confidence 688888776655444 3478899998888887654433 4788899999998765 46888999999999999999
Q ss_pred EcccchHHH
Q 014435 102 TVPELWDKV 110 (424)
Q Consensus 102 ~~~~~~~~~ 110 (424)
..+..+..+
T Consensus 278 ~~P~~~~~l 286 (539)
T 1mdb_A 278 LVPPLAMVW 286 (539)
T ss_dssp ECHHHHHHH
T ss_pred ccHHHHHHH
Confidence 988766554
No 47
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=79.27 E-value=8 Score=36.93 Aligned_cols=82 Identities=15% Similarity=0.120 Sum_probs=63.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHH---HHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI---CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~---~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
+|.+.+...+...+.. .++.++|++....|....+-. .+++.+..|+.++..+. ..+..+...+++.+++++.
T Consensus 211 ~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~ 286 (544)
T 3o83_A 211 RTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAPN-PEPLNCFSIIQRHQVNMAS 286 (544)
T ss_dssp EEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSS-CCHHHHHHHHHHHTCCEEE
T ss_pred echHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEECCC-CCHHHHHHHHHHHCCCEEE
Confidence 6888887776665543 488999999998886654433 37888899999887754 5788889999999999999
Q ss_pred EcccchHHH
Q 014435 102 TVPELWDKV 110 (424)
Q Consensus 102 ~~~~~~~~~ 110 (424)
..+.....+
T Consensus 287 ~~P~~~~~l 295 (544)
T 3o83_A 287 LVPSAVIMW 295 (544)
T ss_dssp ECHHHHHHH
T ss_pred echHHHHHH
Confidence 988765544
No 48
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=77.50 E-value=8.6 Score=36.43 Aligned_cols=83 Identities=8% Similarity=0.137 Sum_probs=62.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHH--HHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPIC--FLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~--~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+..++.. .++.++|++...+|-....-.. +++++ .|+..+..+ ...+..+...+++.++.++..
T Consensus 190 ~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 264 (517)
T 3r44_A 190 HTHESVHSAASSWAST---IDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISMP-QFDATKVWSLIVEERVCIGGA 264 (517)
T ss_dssp EEHHHHHHHHHHHHHH---SCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEECS-SCCHHHHHHHHHHTTCCEEEE
T ss_pred eeHHHHHHHHHHHHHh---cCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEeC-CCCHHHHHHHHHHhCCeEEEe
Confidence 7888887776665544 4889999999988876554433 44555 899888774 578899999999999999999
Q ss_pred cccchHHHhc
Q 014435 103 VPELWDKVKD 112 (424)
Q Consensus 103 ~~~~~~~~~~ 112 (424)
.+..+..+..
T Consensus 265 ~P~~~~~l~~ 274 (517)
T 3r44_A 265 VPAILNFMRQ 274 (517)
T ss_dssp CHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8877665543
No 49
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=75.45 E-value=5.9 Score=37.91 Aligned_cols=87 Identities=13% Similarity=0.093 Sum_probs=64.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|.+.+..........+...++.+++++....|-...+ +...++.+..|+..+..+ ...++.+...+++.++++++..
T Consensus 210 ~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 288 (550)
T 3rix_A 210 LPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMY-RFEEELFLRSLQDYKIQSALLV 288 (550)
T ss_dssp EEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-SCCHHHHHHHHHHTTCSEEEEC
T ss_pred hhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHcCCeEEEeC
Confidence 68887776655444333335788999998888876433 345677788999988774 5688999999999999999998
Q ss_pred ccchHHHhc
Q 014435 104 PELWDKVKD 112 (424)
Q Consensus 104 ~~~~~~~~~ 112 (424)
+..+..+..
T Consensus 289 P~~~~~l~~ 297 (550)
T 3rix_A 289 PTLFSFFAK 297 (550)
T ss_dssp HHHHHHHHH
T ss_pred cHHHHHHHh
Confidence 877665543
No 50
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=74.93 E-value=15 Score=34.07 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=75.3
Q ss_pred CCCCEEEEecCC--CCCCCcchhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec
Q 014435 160 KQTDAAALLYSS--GTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 237 (424)
Q Consensus 160 ~~~~~~~i~~TS--GtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 237 (424)
.++.++++.... +.+| ....+|.+.+...+..++........+.+++...++-... +...+++++..|+..+..
T Consensus 37 ~pd~~Al~~~~~~~~~~g--~~~~~Ty~el~~~~~~lA~~L~~~g~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl 112 (480)
T 3t5a_A 37 QPHDPAFTFMDYEQDWDG--VAITLTWSQLYRRTLNVAQELSRCGSTGDRVVISAPQGLE--YVVAFLGALQAGRIAVPL 112 (480)
T ss_dssp STTSEEEEEEETTTCTTC--EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEECCSSHH--HHHHHHHHHHTTCEEEEE
T ss_pred CCCCceEEEecccCCCCC--ceEEEcHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCcHH--HHHHHHHHHHhCcEEEee
Confidence 367777765432 2222 2246799999888888777665544455888887776543 334678999999999877
Q ss_pred CC----CCHHHHHHHHHHccceEEEechHHHHHHHh
Q 014435 238 GK----FDIEMALRAIEKYRVTVWWVVPPIILALAK 269 (424)
Q Consensus 238 ~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 269 (424)
.. ...+++...+++.++..++..+.....+.+
T Consensus 113 ~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 113 SVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp CSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 53 456889999999999999998877665543
No 51
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=74.87 E-value=24 Score=31.24 Aligned_cols=87 Identities=13% Similarity=0.060 Sum_probs=60.7
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~~a---~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
+.......|+.+++.|......... +.++..++++|++|+|...-+.-.++++++....|+.++.++. +++ -..
T Consensus 126 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~--~~~-r~~ 202 (348)
T 4eez_A 126 VADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI--NQD-KLN 202 (348)
T ss_dssp EGGGSCBCCTTSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEES--CHH-HHH
T ss_pred cccceeecCCCCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC--cHH-Hhh
Confidence 4455667888999988655443332 2345668999999999988777777777777777877776654 333 346
Q ss_pred HHHhcCCeEEEEc
Q 014435 91 QVKDSNPKLVITV 103 (424)
Q Consensus 91 ~l~~~~~~~ii~~ 103 (424)
+++..+++.++..
T Consensus 203 ~~~~~Ga~~~i~~ 215 (348)
T 4eez_A 203 LAKKIGADVTINS 215 (348)
T ss_dssp HHHHTTCSEEEEC
T ss_pred hhhhcCCeEEEeC
Confidence 6778888887754
No 52
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=73.05 E-value=6 Score=37.42 Aligned_cols=84 Identities=12% Similarity=0.131 Sum_probs=64.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCC--CCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPV--YTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~--~~~~~i~~~l~~~~~~~ii 101 (424)
+|.+.+...+..... ..++.++|++....|-+... +..+++++..|+..+.++.. ..+..+...+++.+++++.
T Consensus 164 ~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 240 (512)
T 3fce_A 164 ITYNCLVSFTKWAVE---DFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDKDMIARPKDLFASLEQSDIQVWT 240 (512)
T ss_dssp EEHHHHHHHHHHHHH---HTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCCEEE
T ss_pred EehHHHHHHHHHHHH---hcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCHHHhhCHHHHHHHHHHcCCcEEE
Confidence 688888766554443 45889999999998876443 44578889999999988653 5678899999999999999
Q ss_pred EcccchHHHh
Q 014435 102 TVPELWDKVK 111 (424)
Q Consensus 102 ~~~~~~~~~~ 111 (424)
..+.....+.
T Consensus 241 ~~P~~~~~l~ 250 (512)
T 3fce_A 241 STPSFAEMCL 250 (512)
T ss_dssp ECHHHHHHHT
T ss_pred ecHHHHHHHH
Confidence 9887766543
No 53
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=72.82 E-value=9.9 Score=35.91 Aligned_cols=84 Identities=13% Similarity=0.118 Sum_probs=64.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHH-HHHHHHHHhCCeEecCCCC--CCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP-ICFLGVIAIGAIASTANPV--YTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~-~~~lA~~~~G~~~v~l~~~--~~~~~i~~~l~~~~~~~ii 101 (424)
+|.+.+...+..+.. ..++.++|++....|-+...- ..+++++..|+.++..+.. ..+..+...+++.+++++.
T Consensus 163 ~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 239 (511)
T 3e7w_A 163 ISAANLQSFTDWICA---DFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTKDAVNKPKVLFEELKKSGLNVWT 239 (511)
T ss_dssp EEHHHHHHHHHHHHH---HSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCSEEE
T ss_pred EcHHHHHHHHHHHHH---hcCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCcEEE
Confidence 788888766655443 457889999999888765443 4578889999998877653 4678888999999999999
Q ss_pred EcccchHHHh
Q 014435 102 TVPELWDKVK 111 (424)
Q Consensus 102 ~~~~~~~~~~ 111 (424)
..+..+..+.
T Consensus 240 ~~P~~~~~l~ 249 (511)
T 3e7w_A 240 STPSFVQMCL 249 (511)
T ss_dssp ECHHHHHHHH
T ss_pred ecHHHHHHHH
Confidence 9887766554
No 54
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=71.58 E-value=9.8 Score=36.28 Aligned_cols=86 Identities=17% Similarity=0.164 Sum_probs=62.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHH-HHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI-CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+|.+.+...+.... .....++.++|++...+|-....-. ..++++..|+..+..++..+++.+...+++.+++++...
T Consensus 196 ~sh~~l~~~~~~~~-~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~ 274 (541)
T 1v25_A 196 YSHRALVLHSLAAS-LVDGTALSEKDVVLPVVPMFHVNAWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGV 274 (541)
T ss_dssp EEHHHHHHHHHHTT-STTTTCCCTTCEEEECSCTTSHHHHTHHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEEC
T ss_pred eehHHHHHHHhhhh-hcccccCCCCCEEEEeccchhhhHHHHHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEecc
Confidence 68877754432211 1123478899999888887543332 457788899999988777789999999999999999998
Q ss_pred ccchHHHh
Q 014435 104 PELWDKVK 111 (424)
Q Consensus 104 ~~~~~~~~ 111 (424)
+..+..+.
T Consensus 275 P~~~~~l~ 282 (541)
T 1v25_A 275 PTVWLALA 282 (541)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 87665543
No 55
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=70.81 E-value=26 Score=30.84 Aligned_cols=86 Identities=10% Similarity=0.109 Sum_probs=58.1
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHH--H-HHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIK--V-SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~--~-a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
+.......|+.+++.+....... . -+.|...++++|++|++....+.-.+++++|- ..|+.++.++. +++.+ .
T Consensus 129 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~-~ 204 (340)
T 3s2e_A 129 DPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAVDI--DDAKL-N 204 (340)
T ss_dssp CTTTSEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEEES--CHHHH-H
T ss_pred chHHEEECCCCCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeC--CHHHH-H
Confidence 44556668889999886533222 1 23355568999999999987667777777776 46887776644 34443 4
Q ss_pred HHHhcCCeEEEEc
Q 014435 91 QVKDSNPKLVITV 103 (424)
Q Consensus 91 ~l~~~~~~~ii~~ 103 (424)
.+++.+++.++..
T Consensus 205 ~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 205 LARRLGAEVAVNA 217 (340)
T ss_dssp HHHHTTCSEEEET
T ss_pred HHHHcCCCEEEeC
Confidence 5677888887754
No 56
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=69.91 E-value=25 Score=34.03 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=62.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHH---HHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI---CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~---~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 101 (424)
+|.+.+...+...... .++.+++++....|-...+-. .+++++..|+.++..+. .....+...+++.+++++.
T Consensus 204 ~th~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~ 279 (617)
T 3rg2_A 204 RTHNDYYYSVRRSVEI---CQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAAD-PSATLCFPLIEKHQVNVTA 279 (617)
T ss_dssp EEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECSS-CCHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHHHHHHHHh---cCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeCC-CCHHHHHHHHHHhCCcEEE
Confidence 7888887766655444 478899999999886544433 47888899999887654 5778888999999999999
Q ss_pred EcccchHHH
Q 014435 102 TVPELWDKV 110 (424)
Q Consensus 102 ~~~~~~~~~ 110 (424)
..+..+..+
T Consensus 280 ~~P~~~~~l 288 (617)
T 3rg2_A 280 LVPPAVSLW 288 (617)
T ss_dssp ECHHHHHHH
T ss_pred cchHHHHHH
Confidence 988765544
No 57
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=69.91 E-value=15 Score=35.22 Aligned_cols=71 Identities=13% Similarity=0.167 Sum_probs=56.9
Q ss_pred HHcCCCCCCEEEEECCCCccHHH--HHHHHHHhCCeEecCCC-CCCHHHHHHHHHhcCCeEEEEcccchHHHhc
Q 014435 42 RHLGITKKDVVLIFAPNSIHFPI--CFLGVIAIGAIASTANP-VYTVSELSKQVKDSNPKLVITVPELWDKVKD 112 (424)
Q Consensus 42 ~~~gi~~g~~V~l~~~~~~~~~~--~~lA~~~~G~~~v~l~~-~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~ 112 (424)
...++.++|++....|-+..+-. .+++.+..|+..+..+. ...+..+...+++.++++++..+..+..+..
T Consensus 240 ~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 313 (570)
T 3c5e_A 240 GWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQ 313 (570)
T ss_dssp TTTSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHT
T ss_pred hhcCCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHh
Confidence 45688999999888887755433 46788889998887764 6789999999999999999999887776654
No 58
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=69.06 E-value=56 Score=31.00 Aligned_cols=104 Identities=8% Similarity=0.006 Sum_probs=72.9
Q ss_pred CCCEEEEecCCCC-CCCcchhhhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 161 QTDAAALLYSSGT-TGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 161 ~~~~~~i~~TSGt-TG~pK~v~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
++.++++....+. .+. .-.+|.+.+...+..++....... .+.+++...++-+.. +...+++++..|+..+..+
T Consensus 33 p~~~A~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~vpl~ 108 (549)
T 3g7s_A 33 GEKTAIISAEPKFPSEF--PESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSID--YVMTIYALWRVAATPVPIN 108 (549)
T ss_dssp TTSEEEEEESSCCCCSS--CSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHH--HHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEeCCCcccccc--cceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCCEEEccC
Confidence 5677776543221 111 235788888888777766654332 344888888776543 3346788999999998886
Q ss_pred C-CCHHHHHHHHHHccceEEEechHHHHHHH
Q 014435 239 K-FDIEMALRAIEKYRVTVWWVVPPIILALA 268 (424)
Q Consensus 239 ~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 268 (424)
+ +...++...+++.+++.++..+.....+.
T Consensus 109 ~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~ 139 (549)
T 3g7s_A 109 PMYKSFELEHILNDSEATTLVVHSMLYENFK 139 (549)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEGGGHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHHHHHH
Confidence 4 78899999999999999999887665543
No 59
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=68.45 E-value=29 Score=30.46 Aligned_cols=94 Identities=19% Similarity=0.226 Sum_probs=57.7
Q ss_pred CCCCceeecCCCCCCCCCCCcHHH---HHHHHHH--HHH-HHHH-cCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEe
Q 014435 6 YGRDGIYRSLRPPLVLPSDPSFSM---FKSIVIK--VSH-SFRH-LGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIAS 77 (424)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~Ty~e---l~~~~~~--~a~-~L~~-~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v 77 (424)
|++-............|+.+++.+ ....... .|. .+.+ .++++|++|++... .++-..++.+|. ..|+.++
T Consensus 99 ~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~-~~Ga~Vi 177 (334)
T 3qwb_A 99 FAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLK-MKGAHTI 177 (334)
T ss_dssp SBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHH-HTTCEEE
T ss_pred ceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEE
Confidence 333333332555666888999998 3221111 111 2333 37999999999984 456666666655 5798877
Q ss_pred cCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 78 TANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 78 ~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
.+.. +++++. .+++.+++.++..
T Consensus 178 ~~~~--~~~~~~-~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 178 AVAS--TDEKLK-IAKEYGAEYLINA 200 (334)
T ss_dssp EEES--SHHHHH-HHHHTTCSEEEET
T ss_pred EEeC--CHHHHH-HHHHcCCcEEEeC
Confidence 6654 344444 6677888877754
No 60
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=68.18 E-value=9.9 Score=36.63 Aligned_cols=83 Identities=13% Similarity=0.159 Sum_probs=63.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHH--HHHHHHHhCCeEecCCCCC---CHHHHHHHHHhcCCeE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI--CFLGVIAIGAIASTANPVY---TVSELSKQVKDSNPKL 99 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~--~~lA~~~~G~~~v~l~~~~---~~~~i~~~l~~~~~~~ 99 (424)
+|.+.+...+..... ..++.++|++...+|-...+-. .+++.+..|+..+..++.. .+..+...+++.++++
T Consensus 187 ~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~ 263 (590)
T 3kxw_A 187 VSHHNLLDNLNKIFT---SFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATI 263 (590)
T ss_dssp EEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSE
T ss_pred eeHHHHHHHHHHHHH---hhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCee
Confidence 799988877666544 4588999999999988766543 3788899999999876532 5677888999999999
Q ss_pred EEEcccchHHH
Q 014435 100 VITVPELWDKV 110 (424)
Q Consensus 100 ii~~~~~~~~~ 110 (424)
+...+..+..+
T Consensus 264 ~~~~p~~~~~l 274 (590)
T 3kxw_A 264 SGSPNFAYDYC 274 (590)
T ss_dssp EEECTHHHHHH
T ss_pred ecCChhHHHHH
Confidence 98877655443
No 61
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=67.69 E-value=47 Score=31.43 Aligned_cols=99 Identities=8% Similarity=0.097 Sum_probs=70.8
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
.++.++++....| -.+|.+.+...+..++....... .+.+++...++-+.. +...+++++..|+..+..+
T Consensus 35 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~la~~~~Gav~vpl~ 105 (536)
T 3ni2_A 35 HSSKPCLINGANG-------DVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPE--FVLAFLGASHRGAIITAAN 105 (536)
T ss_dssp STTSEEEEETTTC-------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHH--HHHHHHHHHHHTCEEEECC
T ss_pred CCCceEEEECCCC-------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHHHHhCCEEeccC
Confidence 4677777653222 25788888888777766654332 344888888776543 3346788899999988775
Q ss_pred C-CCHHHHHHHHHHccceEEEechHHHHHH
Q 014435 239 K-FDIEMALRAIEKYRVTVWWVVPPIILAL 267 (424)
Q Consensus 239 ~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l 267 (424)
+ .....+...+++.++..++..+.....+
T Consensus 106 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 135 (536)
T 3ni2_A 106 PFSTPAELAKHAKASRAKLLITQACYYEKV 135 (536)
T ss_dssp TTCCHHHHHHHHHHHTEEEEEECGGGTHHH
T ss_pred CCCCHHHHHHHHHhcCCEEEEEChHHHHHH
Confidence 4 7889999999999999999887655443
No 62
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=67.67 E-value=11 Score=35.55 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=62.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCC--CCCCEEEEECCCCccHH--HHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGI--TKKDVVLIFAPNSIHFP--ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 100 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi--~~g~~V~l~~~~~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 100 (424)
+|.+.+...+..+.. ..++ .+++++...+|-...+- ..+++.+..|+..+..+. ..+..+...+++.+++++
T Consensus 173 ~sh~~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~ 248 (504)
T 1t5h_X 173 IPQRAAESRVLFMST---QVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEE-FRPVDALQLVQQEQVTSL 248 (504)
T ss_dssp EEGGGHHHHHHHHHH---TTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEECSS-CCHHHHHHHHHHHTCCEE
T ss_pred ecHHHHHHHHHHHHH---hhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCceEEeCCC-CCHHHHHHHHHHhCCeEE
Confidence 688888766555433 3467 78888888888765443 347888899999987754 688899999999999999
Q ss_pred EEcccchHHHh
Q 014435 101 ITVPELWDKVK 111 (424)
Q Consensus 101 i~~~~~~~~~~ 111 (424)
+..+..+..+.
T Consensus 249 ~~~P~~~~~l~ 259 (504)
T 1t5h_X 249 FATPTHLDALA 259 (504)
T ss_dssp ECCHHHHHHHH
T ss_pred EeChHHHHHHH
Confidence 99887766554
No 63
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=62.48 E-value=41 Score=27.42 Aligned_cols=91 Identities=15% Similarity=0.141 Sum_probs=54.6
Q ss_pred cEEEEecch--HHHHHHHHHHHHHhhcCceEEec-CCCCHHHHHHHHHHccceEEEe--c----hHH--HHHHHhccccc
Q 014435 206 HVVLCVLPM--FHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWV--V----PPI--ILALAKNSLVR 274 (424)
Q Consensus 206 ~~~~~~~p~--~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~--~----p~~--~~~l~~~~~~~ 274 (424)
.+++...+- .|..|.......--..|..++.. ....++.+++.+.+++++++.. + +.+ +..+++.....
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~ 172 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEE 172 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHT
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHc
Confidence 344444433 56677754444444677777655 4578999999999999997777 2 221 23333322222
Q ss_pred cCCC-CCeeEEEecCCCCCHHHHHHH
Q 014435 275 KFDI-SSLKLVGSGAAPLGKELMEDC 299 (424)
Q Consensus 275 ~~~~-~~lr~~~~~g~~~~~~~~~~~ 299 (424)
. + ..++ +++||.+++++..+.+
T Consensus 173 ~--~~~~v~-v~vGG~~~~~~~a~~i 195 (215)
T 3ezx_A 173 K--LRDSVK-CMFGGAPVSDKWIEEI 195 (215)
T ss_dssp T--CGGGSE-EEEESSSCCHHHHHHH
T ss_pred C--CCCCCE-EEEECCCCCHHHHHHh
Confidence 1 1 1333 7889999998765543
No 64
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=61.71 E-value=34 Score=32.08 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=57.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHH-HHHH-HHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI-CFLG-VIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~-~~lA-~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+..... ..++.++|++...+|-...+-. ..+. ++..|+.+++. ...++.+...+++.+++++..
T Consensus 180 ~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~~~~~--~~~~~~~~~~i~~~~~t~~~~ 254 (509)
T 3ivr_A 180 ISQGNLLIAQSSLVD---AWRLTEADVNLGMLPLFHVTGLGLMLTLQQAGGASVIAA--KFDPAQAARDIEAHKVTVMAE 254 (509)
T ss_dssp EEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS--SCCHHHHHHHHHHHTCCEEEE
T ss_pred EehHHHHHHHHHHHH---hhCCCCCcEEEEeCCCcchhHHHHHHHHHHhCCcEEEec--ccCHHHHHHHHHHHCCcEEEe
Confidence 688888766655544 4588999999998887644332 2333 44445554443 678999999999999999998
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 255 ~p~~~~~l~ 263 (509)
T 3ivr_A 255 FAPMLGNIL 263 (509)
T ss_dssp ETTHHHHHH
T ss_pred cHHHHHHHH
Confidence 877666554
No 65
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=61.60 E-value=11 Score=33.76 Aligned_cols=82 Identities=7% Similarity=0.047 Sum_probs=57.4
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 24 DPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 24 ~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
.+|.+.+...+..++. ..+++++|++...+|-...+ +..++..+..|+..+..++.... ...+++.+++.+..
T Consensus 56 ~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~~~~~---~~~i~~~~~t~~~~ 129 (358)
T 4gs5_A 56 TVTRAQLAASAAMTGK---ALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEPTANP---LAGLDHADFDFVAM 129 (358)
T ss_dssp EEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECCCSCT---TTTCSSCCCSEEEE
T ss_pred EEeHHHHHHHHHHHHH---HhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCccccH---HHHHHHhCCeEEEc
Confidence 3799988776655544 35889999999888876443 34456667788888777664332 45677889999988
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 130 ~P~~l~~ll 138 (358)
T 4gs5_A 130 VPMQLQSIL 138 (358)
T ss_dssp CHHHHHHHH
T ss_pred ChHHHHHhh
Confidence 877665554
No 66
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=61.59 E-value=26 Score=30.91 Aligned_cols=65 Identities=8% Similarity=-0.080 Sum_probs=47.4
Q ss_pred HHHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 41 FRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 41 L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
+.+.| +++|+.|.+....+=.-..+.++|.+.|..++.+=|...+..-...++..++++++++..
T Consensus 62 a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 62 AEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 34555 488887645555567778888888889988776656555555667889999999999754
No 67
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=59.46 E-value=48 Score=28.85 Aligned_cols=84 Identities=17% Similarity=0.136 Sum_probs=56.6
Q ss_pred CCCCCCCCCCCcHHHHHHHHHH--HH-HHHHHcCCCCCCEEEEEC-CCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIK--VS-HSFRHLGITKKDVVLIFA-PNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~--~a-~~L~~~gi~~g~~V~l~~-~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
.......++.+++.+....... .| +.|...++++|++|++.. .-..-.+++++|- ..|+.++.+. +.++ ..
T Consensus 116 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~-~~Ga~vi~~~---~~~~-~~ 190 (321)
T 3tqh_A 116 PDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAK-QKGTTVITTA---SKRN-HA 190 (321)
T ss_dssp GGGEEECCTTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEE---CHHH-HH
T ss_pred HHHhccCCCCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHH-HcCCEEEEEe---ccch-HH
Confidence 3444567788999887654333 22 234566899999999996 5556666666665 5698776553 4445 56
Q ss_pred HHHhcCCeEEEEc
Q 014435 91 QVKDSNPKLVITV 103 (424)
Q Consensus 91 ~l~~~~~~~ii~~ 103 (424)
++++.+++.++..
T Consensus 191 ~~~~lGa~~~i~~ 203 (321)
T 3tqh_A 191 FLKALGAEQCINY 203 (321)
T ss_dssp HHHHHTCSEEEET
T ss_pred HHHHcCCCEEEeC
Confidence 6788888877654
No 68
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=58.76 E-value=36 Score=31.97 Aligned_cols=82 Identities=11% Similarity=0.233 Sum_probs=60.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH--HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF--PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+..+...+ ++.++|++....|..... +..+++.+..|+.++..+ ....+.+...+ +.++.+++.
T Consensus 175 ~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i-~~~~t~~~~ 249 (505)
T 3nyq_A 175 IPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG-RFSTEGAAREL-NDGATMLFG 249 (505)
T ss_dssp EEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECS-SCCHHHHHHHH-TTTCCEEEE
T ss_pred EeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECC-CCChHHHHHHH-hhCCeEEEe
Confidence 78998887777665544 788899888877764332 335788899999988774 56777777777 679999998
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 250 ~P~~~~~l~ 258 (505)
T 3nyq_A 250 VPTMYHRIA 258 (505)
T ss_dssp CHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 877665543
No 69
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=58.59 E-value=32 Score=32.47 Aligned_cols=69 Identities=22% Similarity=0.291 Sum_probs=55.7
Q ss_pred cCCCCCCEEEEECCCCccHHH--HHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccchHHHhc
Q 014435 44 LGITKKDVVLIFAPNSIHFPI--CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKD 112 (424)
Q Consensus 44 ~gi~~g~~V~l~~~~~~~~~~--~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~ 112 (424)
.++.++|++....|-...+-. .++..+..|+..+..++...++.+...+++.++.+++..+..+..+..
T Consensus 220 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 290 (529)
T 2v7b_A 220 LGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLV 290 (529)
T ss_dssp CCCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHT
T ss_pred cCCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHh
Confidence 478899999888887665533 456788899999988777889999999999999999998877665543
No 70
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=58.35 E-value=79 Score=30.88 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=70.5
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhh-h-ccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE-L-VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 237 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 237 (424)
.++.++++.... .+|. ...+|.+.+...+..++.... . .-.+.+++...+|..--+ ...+++++..|+..+..
T Consensus 95 ~pd~~Al~~~~~-~~~~--~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~--v~a~lA~~~~Gav~vpl 169 (663)
T 1ry2_A 95 TPNKKAIIFEGD-EPGQ--GYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEA--IITLLAISRIGAIHSVV 169 (663)
T ss_dssp CTTSEEEEEECS-STTC--CEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHH--HHHHHHHHHTTCEEEEC
T ss_pred CCCceEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEee
Confidence 356777765422 1222 235799998888888776664 2 223458999988876543 34678889999988877
Q ss_pred C-CCCHHHHHHHHHHccceEEEechH
Q 014435 238 G-KFDIEMALRAIEKYRVTVWWVVPP 262 (424)
Q Consensus 238 ~-~~~~~~~~~~i~~~~~t~~~~~p~ 262 (424)
. .+.++.+...+++.++.++++...
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~~ 195 (663)
T 1ry2_A 170 FAGFSSNSLRDRINDGDSKVVITTDE 195 (663)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEESB
T ss_pred CCCCCHHHHHHHHHhcCCeEEEEccc
Confidence 5 588999999999999999998654
No 71
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=58.14 E-value=20 Score=34.38 Aligned_cols=83 Identities=14% Similarity=0.191 Sum_probs=61.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCCeEecCCC-CCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANP-VYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~-~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+..... .....++.++|++....|-+.+ ....+++.+..|+..+..+. ...+..+...+++.+++++..
T Consensus 234 ~th~~l~~~~~----~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~ 309 (570)
T 4gr5_A 234 SPHRALTGTYL----GQDYAGFGPDEVFLQCSPVSWDAFGLELFGALLFGARCVLQSGQNPDPLEIGELVARHGVTMLQL 309 (570)
T ss_dssp EEHHHHHHHHS----SCCSSCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHHTCCEEEE
T ss_pred EecHHHHHHHH----hhhhcCCCCCCEEEEecCccHHHHHHHHHHHHhcCCEEEEcCCccCCHHHHHHHHHHcCCcEEEe
Confidence 68877643221 1234478999999998887643 45567888899998887764 567889999999999999999
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 310 ~P~~~~~l~ 318 (570)
T 4gr5_A 310 SASLFNFLV 318 (570)
T ss_dssp EHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 887666554
No 72
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=57.96 E-value=30 Score=30.82 Aligned_cols=86 Identities=13% Similarity=0.062 Sum_probs=56.1
Q ss_pred CCCCCCCCCCcHHHHH---HHHHH---HHHHHHH--cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHH
Q 014435 16 RPPLVLPSDPSFSMFK---SIVIK---VSHSFRH--LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSE 87 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~---~~~~~---~a~~L~~--~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 87 (424)
......|+.+++.+.. -.... .-+.|.+ .++++|++|+|...-..-.+++++|-...|+.++.++. +++.
T Consensus 146 ~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~~~ 223 (359)
T 1h2b_A 146 RSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEK 223 (359)
T ss_dssp GGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHH
T ss_pred HhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CHHH
Confidence 3455678889998765 11111 1223555 68999999999998667777777776543887666553 3344
Q ss_pred HHHHHHhcCCeEEEEcc
Q 014435 88 LSKQVKDSNPKLVITVP 104 (424)
Q Consensus 88 i~~~l~~~~~~~ii~~~ 104 (424)
..++++.+++.++...
T Consensus 224 -~~~~~~lGa~~vi~~~ 239 (359)
T 1h2b_A 224 -LKLAERLGADHVVDAR 239 (359)
T ss_dssp -HHHHHHTTCSEEEETT
T ss_pred -HHHHHHhCCCEEEecc
Confidence 3455788898877543
No 73
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=56.78 E-value=19 Score=31.82 Aligned_cols=86 Identities=3% Similarity=-0.061 Sum_probs=55.9
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHH--H-HHHHHc--CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKV--S-HSFRHL--GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELS 89 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~--a-~~L~~~--gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~ 89 (424)
.......++ +++.+........ | +.|.+. ++++|++|++...-..-.+++++|-..-|+.++.++. +++. .
T Consensus 134 ~~~~~~~p~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~~-~ 209 (345)
T 3jv7_A 134 ARHLVPIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDDR-L 209 (345)
T ss_dssp GGGEEECTT-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHHH-H
T ss_pred hhceEeCCC-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHH-H
Confidence 444455677 8888765333321 2 234443 7899999999987667777777777664677666644 3333 4
Q ss_pred HHHHhcCCeEEEEcc
Q 014435 90 KQVKDSNPKLVITVP 104 (424)
Q Consensus 90 ~~l~~~~~~~ii~~~ 104 (424)
.++++.+++.++...
T Consensus 210 ~~~~~lGa~~~i~~~ 224 (345)
T 3jv7_A 210 ALAREVGADAAVKSG 224 (345)
T ss_dssp HHHHHTTCSEEEECS
T ss_pred HHHHHcCCCEEEcCC
Confidence 566788888877643
No 74
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=55.20 E-value=1e+02 Score=29.28 Aligned_cols=95 Identities=11% Similarity=0.016 Sum_probs=67.7
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhc-cCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK 239 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 239 (424)
++.++++.. .-.+|.+.+...+..++...... -.+++++...++-+.. +...+++++..|+..+..++
T Consensus 53 p~~~Al~~~---------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~vpl~~ 121 (563)
T 1amu_A 53 PNNVAIVCE---------NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSID--LFIGILAVLKAGGAYVPIDI 121 (563)
T ss_dssp TTSEEEEET---------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHH--HHHHHHHHHHTTCEEEECCT
T ss_pred CCCeEEEeC---------CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEEeCC
Confidence 566776531 12578888888777766654432 2344888887776543 33467888999999988754
Q ss_pred -CCHHHHHHHHHHccceEEEechHHHHH
Q 014435 240 -FDIEMALRAIEKYRVTVWWVVPPIILA 266 (424)
Q Consensus 240 -~~~~~~~~~i~~~~~t~~~~~p~~~~~ 266 (424)
+..+.+...+++.++..++..+.....
T Consensus 122 ~~~~~~l~~il~~~~~~~li~~~~~~~~ 149 (563)
T 1amu_A 122 EYPKERIQYILDDSQARMLLTQKHLVHL 149 (563)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECGGGHHH
T ss_pred CCcHHHHHHHHHhcCCCEEEEcCchhhh
Confidence 788999999999999999988765443
No 75
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=54.94 E-value=66 Score=28.45 Aligned_cols=87 Identities=15% Similarity=0.143 Sum_probs=56.3
Q ss_pred CCCCCCCCCCcHHHHHHHH--HHHHH-HHHH-cCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEe-cCCCCCCHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIV--IKVSH-SFRH-LGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIAS-TANPVYTVSELS 89 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~--~~~a~-~L~~-~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v-~l~~~~~~~~i~ 89 (424)
......|+.+++.+..... --.|. .|.+ .++++|++|+|... -+.-.+++++|-. .|+..+ ..+.....++..
T Consensus 131 ~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~-~Ga~vi~~~~~~~~~~~~~ 209 (357)
T 1zsy_A 131 EALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAA-LGLRTINVVRDRPDIQKLS 209 (357)
T ss_dssp GGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHH-HTCEEEEEECCCSCHHHHH
T ss_pred HHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHH-cCCEEEEEecCccchHHHH
Confidence 3445567889988765431 12232 3434 48999999999987 5577777777654 688544 444444445555
Q ss_pred HHHHhcCCeEEEEc
Q 014435 90 KQVKDSNPKLVITV 103 (424)
Q Consensus 90 ~~l~~~~~~~ii~~ 103 (424)
..+++.+++.++..
T Consensus 210 ~~~~~lGa~~vi~~ 223 (357)
T 1zsy_A 210 DRLKSLGAEHVITE 223 (357)
T ss_dssp HHHHHTTCSEEEEH
T ss_pred HHHHhcCCcEEEec
Confidence 67788999988754
No 76
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=54.82 E-value=40 Score=29.85 Aligned_cols=64 Identities=19% Similarity=0.104 Sum_probs=49.3
Q ss_pred HHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 42 RHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 42 ~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
.+.| +++|.+..+....+=.-..+.++|.+.|..+..+=|...+......++.+++++++++..
T Consensus 78 ~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 78 EEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPA 142 (344)
T ss_dssp HHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 3344 677776666666777788888999999988877767666666678899999999999753
No 77
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=54.64 E-value=31 Score=33.51 Aligned_cols=83 Identities=10% Similarity=0.135 Sum_probs=62.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHH-HHHHHHHHhCCeEecCC-CCCCHHHHHHHHHhcCCeEEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP-ICFLGVIAIGAIASTAN-PVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~-~~~lA~~~~G~~~v~l~-~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+|.+.+...+. .....++.+++++....|-+.+.- ..+++.+..|+.++..+ ....++.+...+++.+++++..
T Consensus 184 ~th~~l~~~~~----~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~ 259 (620)
T 4dg8_A 184 CTHAGITRLCL----GQSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWL 259 (620)
T ss_dssp EEHHHHHHHHS----SCGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCSSSCCHHHHHHHHHTTCCCEEEE
T ss_pred EchHHHHHHHH----HHHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeCccccCCHHHHHHHHHHhCCcEEEc
Confidence 68877644322 223458899999999998876544 44688888999888764 3568899999999999999999
Q ss_pred cccchHHHh
Q 014435 103 VPELWDKVK 111 (424)
Q Consensus 103 ~~~~~~~~~ 111 (424)
.+..+..+.
T Consensus 260 ~Ps~~~~l~ 268 (620)
T 4dg8_A 260 TASLFNTLV 268 (620)
T ss_dssp EHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 887666553
No 78
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=53.91 E-value=43 Score=32.14 Aligned_cols=70 Identities=6% Similarity=0.070 Sum_probs=55.7
Q ss_pred HcCCCCCCEEEEECCCCccHHH--HHHHHHHhCCeEecCC-CCCCHHHHHHHHHhcCCeEEEEcccchHHHhc
Q 014435 43 HLGITKKDVVLIFAPNSIHFPI--CFLGVIAIGAIASTAN-PVYTVSELSKQVKDSNPKLVITVPELWDKVKD 112 (424)
Q Consensus 43 ~~gi~~g~~V~l~~~~~~~~~~--~~lA~~~~G~~~v~l~-~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~ 112 (424)
..++.+++++....+.+..... .+++.+..|+.+++.+ ....++.+...+++.+++++...+..+..+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 332 (580)
T 3etc_A 260 WQNVEDDGLHYTVADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIK 332 (580)
T ss_dssp TSCCCTTCEEEECCCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHT
T ss_pred hhCCCCCceEEEeCChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHh
Confidence 3578899988888877655433 4688899999998775 56788999999999999999998877766544
No 79
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=53.39 E-value=25 Score=31.35 Aligned_cols=86 Identities=7% Similarity=0.056 Sum_probs=53.7
Q ss_pred CCCCCCCCCCcHHHHHHHHHH--HH-HHHHHcCCC-CCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIK--VS-HSFRHLGIT-KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~--~a-~~L~~~gi~-~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
......|+.+++.+....... .| +.|.+.+++ +|++|+|...-..-.+++.+|-. .|+.++.+... ++.+..+
T Consensus 144 ~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~Vi~~~~~--~~~~~~~ 220 (357)
T 2cf5_A 144 KFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA-MGHHVTVISSS--NKKREEA 220 (357)
T ss_dssp GGEEECCSSCCHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESS--TTHHHHH
T ss_pred hhEEECcCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeCC--hHHHHHH
Confidence 344567788998875422211 11 235566888 99999999876677777777664 58876655543 2334444
Q ss_pred HHhcCCeEEEEcc
Q 014435 92 VKDSNPKLVITVP 104 (424)
Q Consensus 92 l~~~~~~~ii~~~ 104 (424)
.++.+++.++...
T Consensus 221 ~~~lGa~~vi~~~ 233 (357)
T 2cf5_A 221 LQDLGADDYVIGS 233 (357)
T ss_dssp HTTSCCSCEEETT
T ss_pred HHHcCCceeeccc
Confidence 4477887776543
No 80
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=52.50 E-value=29 Score=31.11 Aligned_cols=84 Identities=12% Similarity=0.066 Sum_probs=52.2
Q ss_pred CCCCCCCCC-CcHHHHHHHHHH--H-HHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 16 RPPLVLPSD-PSFSMFKSIVIK--V-SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 16 ~~~~~~~~~-~Ty~el~~~~~~--~-a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
......|+. +++.+....... . -+.|.+.++++|++|+|....+.-.+++++|-. .|+.++.+... ++.+ ..
T Consensus 158 ~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~Vi~~~~~--~~~~-~~ 233 (369)
T 1uuf_A 158 RYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHA-MGAHVVAFTTS--EAKR-EA 233 (369)
T ss_dssp GGCEECCSCGGGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESS--GGGH-HH
T ss_pred hhEEECCCCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEeCC--HHHH-HH
Confidence 445567888 998875422211 1 133555689999999999875566777776654 68876555432 2232 34
Q ss_pred HHhcCCeEEEEc
Q 014435 92 VKDSNPKLVITV 103 (424)
Q Consensus 92 l~~~~~~~ii~~ 103 (424)
+++.+++.++..
T Consensus 234 a~~lGa~~vi~~ 245 (369)
T 1uuf_A 234 AKALGADEVVNS 245 (369)
T ss_dssp HHHHTCSEEEET
T ss_pred HHHcCCcEEecc
Confidence 456777776643
No 81
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=52.34 E-value=33 Score=30.33 Aligned_cols=84 Identities=11% Similarity=0.017 Sum_probs=55.6
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHH---HHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIKV---SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~~---a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
+.......|+.+++.+........ -+.|.+.++++|++|+|...-..-.+++++|- ..|+.++.+...-. . ..
T Consensus 139 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~~--~-~~ 214 (348)
T 3two_A 139 DENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNEH--K-KQ 214 (348)
T ss_dssp EGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSST--T-HH
T ss_pred chhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCHH--H-HH
Confidence 344556688889998875332221 13455668999999999987556667666665 46888776654322 2 23
Q ss_pred HHHhcCCeEEE
Q 014435 91 QVKDSNPKLVI 101 (424)
Q Consensus 91 ~l~~~~~~~ii 101 (424)
.+++.+++.++
T Consensus 215 ~~~~lGa~~v~ 225 (348)
T 3two_A 215 DALSMGVKHFY 225 (348)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHhcCCCeec
Confidence 45678888887
No 82
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=51.29 E-value=74 Score=27.86 Aligned_cols=83 Identities=16% Similarity=0.197 Sum_probs=53.3
Q ss_pred CCCCCCCCCCCcHHHHHHHHHH--HH-HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIK--VS-HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~--~a-~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
.......|+.+++.+....... .| +.|.+.++++|++|++....+.-..++.+|- ..|+.++.+.. +++.+. .
T Consensus 128 ~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~ 203 (339)
T 1rjw_A 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK-AMGLNVVAVDI--GDEKLE-L 203 (339)
T ss_dssp GGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHH-HTTCEEEEECS--CHHHHH-H
T ss_pred hHHEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-H
Confidence 3445567888998875322111 12 3345558999999999988667777777765 46887766654 344443 4
Q ss_pred HHhcCCeEEE
Q 014435 92 VKDSNPKLVI 101 (424)
Q Consensus 92 l~~~~~~~ii 101 (424)
+++.+++.++
T Consensus 204 ~~~lGa~~~~ 213 (339)
T 1rjw_A 204 AKELGADLVV 213 (339)
T ss_dssp HHHTTCSEEE
T ss_pred HHHCCCCEEe
Confidence 4667777655
No 83
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=50.65 E-value=23 Score=31.41 Aligned_cols=83 Identities=12% Similarity=0.030 Sum_probs=54.6
Q ss_pred CCCCCCCCCcHHHHHHHHHH--HH-HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHHHH
Q 014435 17 PPLVLPSDPSFSMFKSIVIK--VS-HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSKQV 92 (424)
Q Consensus 17 ~~~~~~~~~Ty~el~~~~~~--~a-~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~~l 92 (424)
.....|+.+++.+....... .| +.+...++++|++|+|...-..-.+++++|- ..|+ .++.++. ++ +-..++
T Consensus 132 ~~~~iP~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~--~~-~~~~~~ 207 (352)
T 3fpc_A 132 NLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGAN-HLGAGRIFAVGS--RK-HCCDIA 207 (352)
T ss_dssp HCEECCTTSCHHHHTTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHH-TTTCSSEEEECC--CH-HHHHHH
T ss_pred eEEECCCCCCHHHHhhccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEECC--CH-HHHHHH
Confidence 45567888999887543222 22 2355668999999999986556666666664 5787 5665654 23 334567
Q ss_pred HhcCCeEEEEc
Q 014435 93 KDSNPKLVITV 103 (424)
Q Consensus 93 ~~~~~~~ii~~ 103 (424)
++.+++.++..
T Consensus 208 ~~lGa~~vi~~ 218 (352)
T 3fpc_A 208 LEYGATDIINY 218 (352)
T ss_dssp HHHTCCEEECG
T ss_pred HHhCCceEEcC
Confidence 78888887754
No 84
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=50.33 E-value=73 Score=30.22 Aligned_cols=99 Identities=12% Similarity=0.034 Sum_probs=67.4
Q ss_pred CCCCEEEEecCCCCCCCcc--hhhhcHHHHHHHHHHHHhhhhhccCCCcEEEEecchHHHHHHHHHHHHHhhcCceEEec
Q 014435 160 KQTDAAALLYSSGTTGVSK--GVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 237 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK--~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 237 (424)
.|+.++++...+ ..+..+ .-.+|.+.+...+..++........+.+++...++-+..+ ...+++++..|+..+..
T Consensus 33 ~p~~~A~~~~~~-~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~~gd~V~i~~~n~~~~--~~~~lA~~~~Gav~vpl 109 (562)
T 3ite_A 33 HPEWKAVEVATG-FLGSQKIVTEDWTYKKLNETANQVANLIIHASLHGRAIAVSLDRSLIA--FAIIVGIMKSGNTYVPI 109 (562)
T ss_dssp CTTSEEEEEEEC-C-----CEEEEEEHHHHHHHHHHHHHHHHHTTCSSCEEEEECCSCHHH--HHHHHHHHHTTCEEEEC
T ss_pred CCCchhhhcccc-cccccccccCCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEec
Confidence 356677665422 222221 2457888888888777766544333568888888775533 34678899999999877
Q ss_pred CC-CCHHHHHHHHHHccceEEEech
Q 014435 238 GK-FDIEMALRAIEKYRVTVWWVVP 261 (424)
Q Consensus 238 ~~-~~~~~~~~~i~~~~~t~~~~~p 261 (424)
++ +....+...+++.++..++...
T Consensus 110 ~~~~~~~~l~~~l~~~~~~~~i~~~ 134 (562)
T 3ite_A 110 EAGLPNDRKSFLLRDSRAAMAFVCD 134 (562)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEECT
T ss_pred CCcCHHHHHHHHHHhcCCCEEEEcc
Confidence 54 7889999999999999887653
No 85
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=47.12 E-value=45 Score=30.86 Aligned_cols=86 Identities=13% Similarity=0.115 Sum_probs=55.3
Q ss_pred cCCCCCCCCCCCcHHHHHHHHH--HHHH-HHHH---cCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVI--KVSH-SFRH---LGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVS 86 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~--~~a~-~L~~---~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 86 (424)
+.......|+.+++.+...... ..|. .|.+ .++++|++|+|... -.+-.+++++|. ..|+.++.+.. +++
T Consensus 188 ~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak-~~Ga~vi~~~~--~~~ 264 (456)
T 3krt_A 188 KSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFAL-AGGANPICVVS--SPQ 264 (456)
T ss_dssp EGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEES--SHH
T ss_pred chHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHH-HcCCeEEEEEC--CHH
Confidence 3345556788899988653322 2222 2322 47999999999988 456666666654 57987776653 455
Q ss_pred HHHHHHHhcCCeEEEEc
Q 014435 87 ELSKQVKDSNPKLVITV 103 (424)
Q Consensus 87 ~i~~~l~~~~~~~ii~~ 103 (424)
.+ ..+++.+++.++..
T Consensus 265 ~~-~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 265 KA-EICRAMGAEAIIDR 280 (456)
T ss_dssp HH-HHHHHHTCCEEEET
T ss_pred HH-HHHHhhCCcEEEec
Confidence 54 45578888887754
No 86
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=47.02 E-value=86 Score=27.43 Aligned_cols=87 Identities=16% Similarity=0.125 Sum_probs=52.6
Q ss_pred cCCCCCCCCCCCcHHHHHHH--HHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe-EecCCCCCCHHHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSI--VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI-ASTANPVYTVSELSK 90 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~--~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~i~~ 90 (424)
+.......|+.+++.+..-. ..-....+...++++|++|++...-+.-.+++++|- ..|+. ++.++. +++ -..
T Consensus 124 ~~~~~~~iP~~l~~~~aa~l~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak-~~G~~~vi~~~~--~~~-k~~ 199 (346)
T 4a2c_A 124 KRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAV-ALGAKSVTAIDI--SSE-KLA 199 (346)
T ss_dssp EGGGEEECCTTSCGGGGGGHHHHHHHHHHHHHTTCCTTSEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHH-HHH
T ss_pred chheEEECCCCCCHHHHHhchHHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHHHH-HcCCcEEEEEec--hHH-HHH
Confidence 33445567788888764321 111222344668999999999987556666555554 45654 344433 333 346
Q ss_pred HHHhcCCeEEEEcc
Q 014435 91 QVKDSNPKLVITVP 104 (424)
Q Consensus 91 ~l~~~~~~~ii~~~ 104 (424)
++++.+++.++...
T Consensus 200 ~a~~lGa~~~i~~~ 213 (346)
T 4a2c_A 200 LAKSFGAMQTFNSS 213 (346)
T ss_dssp HHHHTTCSEEEETT
T ss_pred HHHHcCCeEEEeCC
Confidence 67888988887654
No 87
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=46.97 E-value=94 Score=28.97 Aligned_cols=81 Identities=9% Similarity=0.057 Sum_probs=61.0
Q ss_pred hhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CCHHHHHHHHHHccceEEE
Q 014435 181 ILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWW 258 (424)
Q Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 258 (424)
.+|.+.+...+..++....... .+.+++...++-+.. +...+++++..|+..+..++ +..+++...+++.++..++
T Consensus 28 ~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi 105 (503)
T 4fuq_A 28 KISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVE--ALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVV 105 (503)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHH--HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEEE
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 4788888888777766654332 344888887776543 33467899999999988864 7889999999999999999
Q ss_pred echHH
Q 014435 259 VVPPI 263 (424)
Q Consensus 259 ~~p~~ 263 (424)
..+..
T Consensus 106 ~~~~~ 110 (503)
T 4fuq_A 106 CDPSK 110 (503)
T ss_dssp ECGGG
T ss_pred ECchh
Confidence 87653
No 88
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=46.55 E-value=78 Score=28.09 Aligned_cols=88 Identities=11% Similarity=0.091 Sum_probs=58.6
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHH--HHHH-H-HHcCCC-----CCCEEEEEC-CCCccHHHHHHHHHHhCCeEecCCCCC
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIK--VSHS-F-RHLGIT-----KKDVVLIFA-PNSIHFPICFLGVIAIGAIASTANPVY 83 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~--~a~~-L-~~~gi~-----~g~~V~l~~-~~~~~~~~~~lA~~~~G~~~v~l~~~~ 83 (424)
+.......|+.+++.+....-.. .|.. | ...+++ +|++|+|.. .-..-.+++++|-...|+.++.+..
T Consensus 128 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~-- 205 (363)
T 4dvj_A 128 DERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS-- 205 (363)
T ss_dssp EGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS--
T ss_pred CHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC--
Confidence 34455667888999887544333 2222 2 344777 899999998 5567888888777666887776654
Q ss_pred CHHHHHHHHHhcCCeEEEEcc
Q 014435 84 TVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 84 ~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+++. ..++++.+++.++...
T Consensus 206 ~~~~-~~~~~~lGad~vi~~~ 225 (363)
T 4dvj_A 206 RPET-QEWVKSLGAHHVIDHS 225 (363)
T ss_dssp SHHH-HHHHHHTTCSEEECTT
T ss_pred CHHH-HHHHHHcCCCEEEeCC
Confidence 3333 4456778998887653
No 89
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=46.49 E-value=60 Score=30.46 Aligned_cols=86 Identities=13% Similarity=0.124 Sum_probs=62.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccH-HHHHHHHHHhCCeEecCCCC--CCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPV--YTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~--~~~~~i~~~l~~~~~~~ii 101 (424)
+|.+.+...+..+... ...++.+++++....|-+... +..++.++..|+..+..+.. .....+...+++.++.++.
T Consensus 165 ~sh~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 243 (521)
T 3l8c_A 165 ISHDNLLSFTNWMIED-AAFDVPKQPQMLAQPPYSFDLSVMYWAPTLALGGTLFALPKELVADFKQLFTTIAQLPVGIWT 243 (521)
T ss_dssp EEHHHHHHHHHHHHHC-TTTCCCSSCEEECCSCTTSGGGHHHHHHHHHTTCEEEECCGGGTTCHHHHHHHHHHSCCSEEE
T ss_pred EehHHHHHHHHHHhhc-cccCCCCCCeEEecCCccHHHHHHHHHHHHhcCCEEEEcCHHHhhCHHHHHHHHHHcCCcEEE
Confidence 7888887655433322 124778888888877776544 44567788899998877654 3778889999999999999
Q ss_pred EcccchHHHh
Q 014435 102 TVPELWDKVK 111 (424)
Q Consensus 102 ~~~~~~~~~~ 111 (424)
..+.....+.
T Consensus 244 ~~P~~~~~l~ 253 (521)
T 3l8c_A 244 STPSFADMAM 253 (521)
T ss_dssp ECHHHHHHHH
T ss_pred eCCCHHHHHh
Confidence 9887665543
No 90
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=45.11 E-value=1e+02 Score=27.15 Aligned_cols=84 Identities=21% Similarity=0.272 Sum_probs=53.9
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSK 90 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~a---~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~ 90 (424)
.......|+.+++.+..-. .-++ +.|...++++|++|+|...-+.-.+++.+|- ..|+ .++.++. +++. ..
T Consensus 136 ~~~~~~iP~~l~~~~aa~~-~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~-~~ 210 (356)
T 1pl8_A 136 AAFCYKLPDNVTFEEGALI-EPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAK-AMGAAQVVVTDL--SATR-LS 210 (356)
T ss_dssp GGGEEECCTTSCHHHHHHH-HHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHH-HH
T ss_pred hHHEEECcCCCCHHHHHhh-chHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHH-HH
Confidence 3445567888999885432 2222 2244558999999999987556777777665 4688 5665543 3333 34
Q ss_pred HHHhcCCeEEEEc
Q 014435 91 QVKDSNPKLVITV 103 (424)
Q Consensus 91 ~l~~~~~~~ii~~ 103 (424)
++++.+++.++..
T Consensus 211 ~a~~lGa~~vi~~ 223 (356)
T 1pl8_A 211 KAKEIGADLVLQI 223 (356)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHHhCCCEEEcC
Confidence 5677888877653
No 91
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=44.58 E-value=1.5e+02 Score=30.60 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=69.6
Q ss_pred CCCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC
Q 014435 160 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 238 (424)
Q Consensus 160 ~~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 238 (424)
.++.++++...+| ..+|.+.+...+..+........ .+.+++...++-+. .+...+++++..|+..+..+
T Consensus 74 ~pd~~Al~~~~~~-------~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~--e~~v~~lA~~~~Ga~~vpl~ 144 (979)
T 3tsy_A 74 FATKPCLINGPTG-------HVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCP--EFVLSFLAASFRGATATAAN 144 (979)
T ss_dssp TTTSEEEEETTTC-------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCH--HHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCeEEEECCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCH--HHHHHHHHHHHcCCEEEeeC
Confidence 4677887653222 35788888888777766654332 34488888877654 33456788899999988775
Q ss_pred -CCCHHHHHHHHHHccceEEEechHHH
Q 014435 239 -KFDIEMALRAIEKYRVTVWWVVPPII 264 (424)
Q Consensus 239 -~~~~~~~~~~i~~~~~t~~~~~p~~~ 264 (424)
.+.++++...+++.++.+++..+...
T Consensus 145 ~~~~~~~l~~~l~~~~~~~vi~~~~~~ 171 (979)
T 3tsy_A 145 PFFTPAEIAKQAKASNTKLIITEARYV 171 (979)
T ss_dssp TTSCHHHHHHHHHHHTEEEEEECSTTT
T ss_pred CCCCHHHHHHHHHHcCCeEEEEChHHH
Confidence 47889999999999999999876543
No 92
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=44.43 E-value=51 Score=28.57 Aligned_cols=83 Identities=13% Similarity=0.174 Sum_probs=56.1
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~~a---~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
+.......|+.+++.+........+ +.|...++++|++|++...-+.-.+++++|- ..|+.++.+. + ++. ..
T Consensus 105 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~Ga~Vi~~~-~--~~~-~~ 179 (315)
T 3goh_A 105 NTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLN-NAGYVVDLVS-A--SLS-QA 179 (315)
T ss_dssp ETTSEEECCTTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHH-HHTCEEEEEC-S--SCC-HH
T ss_pred cHHHhccCcCCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEE-C--hhh-HH
Confidence 4455666888999998753333322 2344558999999999999556777777765 4688777776 2 222 23
Q ss_pred HHHhcCCeEEE
Q 014435 91 QVKDSNPKLVI 101 (424)
Q Consensus 91 ~l~~~~~~~ii 101 (424)
.+++.+++.++
T Consensus 180 ~~~~lGa~~v~ 190 (315)
T 3goh_A 180 LAAKRGVRHLY 190 (315)
T ss_dssp HHHHHTEEEEE
T ss_pred HHHHcCCCEEE
Confidence 45678888888
No 93
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=44.34 E-value=54 Score=29.32 Aligned_cols=60 Identities=12% Similarity=-0.001 Sum_probs=37.4
Q ss_pred HHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHHHhcC--CeEEEEc
Q 014435 41 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-----VYTVSELSKQVKDSN--PKLVITV 103 (424)
Q Consensus 41 L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~i~~~l~~~~--~~~ii~~ 103 (424)
|...++++||.|.+-.+.... ...++...|+.++.++. ..+.+++...+..-+ +++|+..
T Consensus 70 l~~l~~~~Gd~Vi~~~~~~~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~ 136 (377)
T 3ju7_A 70 IQLKKRKKGKYALMPSFTFPA---TPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY 136 (377)
T ss_dssp HHHHSCTTCCEEEEESSSCTH---HHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB
T ss_pred HHHcCCCCcCEEEECCCCcHH---HHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE
Confidence 344468899988776655433 33456678887766543 246778887774334 6666643
No 94
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=43.43 E-value=87 Score=30.50 Aligned_cols=96 Identities=13% Similarity=0.055 Sum_probs=67.6
Q ss_pred CCCEEEEecCCCCCCCcchhhhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecC-
Q 014435 161 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG- 238 (424)
Q Consensus 161 ~~~~~~i~~TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~- 238 (424)
++.++++... ..+|. ...+|.+.+...+..++....... .+++++...+|...-+ ...+++++..|+..+...
T Consensus 90 pd~~Al~~~~-~~~~~--~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~--vva~lA~~~~Gav~vpl~~ 164 (652)
T 1pg4_A 90 GDRTAIIWEG-DDTSQ--SKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEA--AVAMLACARIGAVHSVIFG 164 (652)
T ss_dssp TTSEEEEEEC-SSTTC--EEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHH--HHHHHHHHHHTCEEEECCT
T ss_pred CCceEEEEEc-CCCCc--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCcEEEecCC
Confidence 5667776532 11222 235788888888777766654332 3458888888876543 346788888898888775
Q ss_pred CCCHHHHHHHHHHccceEEEech
Q 014435 239 KFDIEMALRAIEKYRVTVWWVVP 261 (424)
Q Consensus 239 ~~~~~~~~~~i~~~~~t~~~~~p 261 (424)
.+.++.+...+++.++.++++..
T Consensus 165 ~~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 165 GFSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEES
T ss_pred CCCHHHHHHHHHhcCCCEEEEcC
Confidence 57899999999999999988754
No 95
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=43.33 E-value=84 Score=27.52 Aligned_cols=60 Identities=20% Similarity=0.269 Sum_probs=39.7
Q ss_pred CCCCCCEEEEECCCCc------cHHHHHHH-HHHhCCeEecCCCC------------CCHHHHHHHHHhcCCeEEEEcc
Q 014435 45 GITKKDVVLIFAPNSI------HFPICFLG-VIAIGAIASTANPV------------YTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~------~~~~~~lA-~~~~G~~~v~l~~~------------~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
-+++||+|+|++|.+. +-+-.... +-..|..++.-+.- ...+++..++++-++++|++..
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r 86 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVI 86 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcC
Confidence 4789999999999863 11222222 23458777754321 1246778888888999999985
No 96
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=43.18 E-value=1e+02 Score=27.47 Aligned_cols=86 Identities=10% Similarity=0.115 Sum_probs=54.2
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHH---HHHHHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIKVS---HSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSEL 88 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~~a---~~L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i 88 (424)
+.......|+.+++.+.......++ ..|...+ +++|++|+|...-..-.+++++|- ..|+ .++.+.. +++.
T Consensus 157 ~~~~~~~iP~~l~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~- 232 (380)
T 1vj0_A 157 PETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIAR-SLGAENVIVIAG--SPNR- 232 (380)
T ss_dssp TTCCEEEECTTSCHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHH-HTTBSEEEEEES--CHHH-
T ss_pred ccceEEECCCCCChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHH-HcCCceEEEEcC--CHHH-
Confidence 4555566788899884333332222 2344557 999999999995556666666665 4684 6665543 3333
Q ss_pred HHHHHhcCCeEEEEc
Q 014435 89 SKQVKDSNPKLVITV 103 (424)
Q Consensus 89 ~~~l~~~~~~~ii~~ 103 (424)
..++++.+++.++..
T Consensus 233 ~~~~~~lGa~~vi~~ 247 (380)
T 1vj0_A 233 LKLAEEIGADLTLNR 247 (380)
T ss_dssp HHHHHHTTCSEEEET
T ss_pred HHHHHHcCCcEEEec
Confidence 345667888887754
No 97
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=42.16 E-value=47 Score=29.61 Aligned_cols=85 Identities=9% Similarity=0.129 Sum_probs=51.7
Q ss_pred CCCCCCCCCCcHHHHHHHHHH--H-HHHHHHcCCC-CCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIK--V-SHSFRHLGIT-KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~--~-a~~L~~~gi~-~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
......|+.+++.+....... . -+.|.+.+++ +|++|+|...-.+-..++.+|- ..|+.++.+.. +++.+..+
T Consensus 151 ~~~~~~P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~-~~Ga~Vi~~~~--~~~~~~~~ 227 (366)
T 1yqd_A 151 RYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK-AFGSKVTVIST--SPSKKEEA 227 (366)
T ss_dssp GGCEECCTTSCTTTTGGGGTHHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CGGGHHHH
T ss_pred hhEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHH
Confidence 344556777777653321111 1 1335566888 9999999987556666666665 46887665543 33444444
Q ss_pred HHhcCCeEEEEc
Q 014435 92 VKDSNPKLVITV 103 (424)
Q Consensus 92 l~~~~~~~ii~~ 103 (424)
.+..+++.++..
T Consensus 228 ~~~lGa~~v~~~ 239 (366)
T 1yqd_A 228 LKNFGADSFLVS 239 (366)
T ss_dssp HHTSCCSEEEET
T ss_pred HHhcCCceEEec
Confidence 557788776643
No 98
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=40.80 E-value=1.1e+02 Score=27.21 Aligned_cols=59 Identities=20% Similarity=0.174 Sum_probs=39.0
Q ss_pred HcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC----CCHHHHHHHHHhc--CCeEEEEcc
Q 014435 43 HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDS--NPKLVITVP 104 (424)
Q Consensus 43 ~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~i~~~l~~~--~~~~ii~~~ 104 (424)
..++++||.|.+..+....+. .++...|+.++.++.. ...+++...++.. ++++|+...
T Consensus 66 ~l~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 66 VAGVKQDDIVLASSFTFIASV---APICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp HTTCCTTCEEEEESSSCGGGT---HHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred HcCCCCCCEEEECCCccHHHH---HHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 345788999888877665543 3344578877666542 4678888888764 567776654
No 99
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=39.77 E-value=1.2e+02 Score=26.65 Aligned_cols=83 Identities=16% Similarity=0.187 Sum_probs=52.7
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHH--H-HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKV--S-HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 91 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~--a-~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~ 91 (424)
.......|+.+++.+..-. .-+ | +.|...++++|++|+|....+.-.+++.+|- ..|+.++.++. +++. ..+
T Consensus 133 ~~~~~~iP~~~~~~~aa~~-~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~-~~~ 207 (352)
T 1e3j_A 133 ADFCHKLPDNVSLEEGALL-EPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAK-AYGAFVVCTAR--SPRR-LEV 207 (352)
T ss_dssp GGGEEECCTTSCHHHHHTH-HHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CHHH-HHH
T ss_pred hHHeEECcCCCCHHHHHhh-chHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEcC--CHHH-HHH
Confidence 3445567888998875432 222 2 2344558999999999987556666776665 46887554443 3333 345
Q ss_pred HHhcCCeEEEE
Q 014435 92 VKDSNPKLVIT 102 (424)
Q Consensus 92 l~~~~~~~ii~ 102 (424)
+++.+++.++.
T Consensus 208 ~~~lGa~~~~~ 218 (352)
T 1e3j_A 208 AKNCGADVTLV 218 (352)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHhCCCEEEc
Confidence 56788877664
No 100
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=38.94 E-value=1.4e+02 Score=25.79 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=53.0
Q ss_pred CCCCCCCCCCcHHHHHHHH-H--HHHHHHHH-cCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIV-I--KVSHSFRH-LGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~-~--~~a~~L~~-~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+..... . .....|.+ .++++|++|++... ..+-..++.+|. ..|+.++.+.. +++++ .
T Consensus 104 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~-~ 179 (325)
T 3jyn_A 104 ANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAK-ALGAKLIGTVS--SPEKA-A 179 (325)
T ss_dssp GGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEES--SHHHH-H
T ss_pred HHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHH-HCCCEEEEEeC--CHHHH-H
Confidence 3455678889998865322 1 11223333 47999999999984 456666666655 46887776653 44444 3
Q ss_pred HHHhcCCeEEEEc
Q 014435 91 QVKDSNPKLVITV 103 (424)
Q Consensus 91 ~l~~~~~~~ii~~ 103 (424)
.+++.+++.++..
T Consensus 180 ~~~~~Ga~~~~~~ 192 (325)
T 3jyn_A 180 HAKALGAWETIDY 192 (325)
T ss_dssp HHHHHTCSEEEET
T ss_pred HHHHcCCCEEEeC
Confidence 4567788777654
No 101
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=38.91 E-value=97 Score=28.41 Aligned_cols=63 Identities=19% Similarity=0.066 Sum_probs=45.9
Q ss_pred HHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 42 RHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 42 ~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
.+.| +++|....+....+=.-..+.++|.+.|..++.+=|...+..-...++..++++++++.
T Consensus 166 ~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 4556 46775444445557777788888999998877665655555667788999999999974
No 102
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=38.83 E-value=1.2e+02 Score=26.24 Aligned_cols=64 Identities=13% Similarity=0.054 Sum_probs=43.3
Q ss_pred HHHcCC-CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 41 FRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 41 L~~~gi-~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
+.+.|. ++|+.|.. ...+=.-..+.++|.+.|..++.+-|...+..-...++..++++++++.+
T Consensus 58 a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 58 AEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGA 122 (313)
T ss_dssp HHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCC
Confidence 344453 66776555 44555666677778899988776555444445566788999999999753
No 103
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=38.77 E-value=96 Score=27.30 Aligned_cols=60 Identities=13% Similarity=0.107 Sum_probs=39.9
Q ss_pred CCCCCCEEEEECCCCcc------HHHHHHHHH-HhCCeEecCCCC------------CCHHHHHHHHHhcCCeEEEEcc
Q 014435 45 GITKKDVVLIFAPNSIH------FPICFLGVI-AIGAIASTANPV------------YTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~------~~~~~lA~~-~~G~~~v~l~~~------------~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
-+++||+|+|++|.+.- -+-.....+ ..|..++.-+.. ...+++..++++-++++|++..
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 87 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTI 87 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 47899999999999842 222222223 358887753221 1245677788888999999975
No 104
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=38.03 E-value=1.4e+02 Score=26.31 Aligned_cols=84 Identities=10% Similarity=0.018 Sum_probs=54.6
Q ss_pred CCCCCCCCCCCcHHHHHHHHHH--HH-HHH-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIK--VS-HSF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~--~a-~~L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
.......|+.+++.+....... .| ..| ...++++|++|+|......-.+++.+|- ..|+.++.+.. +++.+ .
T Consensus 152 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~-~ 227 (363)
T 3uog_A 152 EGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAK-ATGAEVIVTSS--SREKL-D 227 (363)
T ss_dssp GGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHH-HTTCEEEEEES--CHHHH-H
T ss_pred hHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEec--CchhH-H
Confidence 3445567888999887543222 22 233 3458999999999995446666666665 57887776653 34443 4
Q ss_pred HHHhcCCeEEEE
Q 014435 91 QVKDSNPKLVIT 102 (424)
Q Consensus 91 ~l~~~~~~~ii~ 102 (424)
.+++.+++.++.
T Consensus 228 ~~~~lGa~~vi~ 239 (363)
T 3uog_A 228 RAFALGADHGIN 239 (363)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHcCCCEEEc
Confidence 467788888775
No 105
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=38.01 E-value=91 Score=27.79 Aligned_cols=94 Identities=7% Similarity=-0.004 Sum_probs=58.4
Q ss_pred CCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH--HHH-H-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecC
Q 014435 5 GYGRDGIYRSLRPPLVLPSDPSFSMFKSIVIKV--SHS-F-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTA 79 (424)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~--a~~-L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l 79 (424)
+|++-... +.......|+.+++.+.......+ |.. + ...++++|++|+|...-..-.+++++|- ..|+ .++.+
T Consensus 147 ~~aey~~v-~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~-~~Ga~~Vi~~ 224 (378)
T 3uko_A 147 TFSQYTVV-HDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAK-TAGASRIIGI 224 (378)
T ss_dssp CSBSEEEE-EGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHH-HHTCSCEEEE
T ss_pred ceEeEEEe-chhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEE
Confidence 34444333 334455678889998865543222 222 3 3458999999999987556666666665 5687 56666
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 80 NPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 80 ~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+..-. . ..++++.+++.++..
T Consensus 225 ~~~~~--~-~~~a~~lGa~~vi~~ 245 (378)
T 3uko_A 225 DIDSK--K-YETAKKFGVNEFVNP 245 (378)
T ss_dssp CSCTT--H-HHHHHTTTCCEEECG
T ss_pred cCCHH--H-HHHHHHcCCcEEEcc
Confidence 54332 2 335678888887653
No 106
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=37.96 E-value=1.2e+02 Score=26.70 Aligned_cols=60 Identities=17% Similarity=0.231 Sum_probs=40.1
Q ss_pred CCCCCCEEEEECCCCccH------HHHHHHHH-HhCCeEecCCCC------------CCHHHHHHHHHhcCCeEEEEcc
Q 014435 45 GITKKDVVLIFAPNSIHF------PICFLGVI-AIGAIASTANPV------------YTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~~------~~~~lA~~-~~G~~~v~l~~~------------~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
-+++||+|+|++|.+.-- +-.....+ ..|..++.-+.. ...+++..++++-++++|++..
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 86 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTL 86 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 478999999999997522 22222223 358887754321 1245677788888999999975
No 107
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=37.90 E-value=55 Score=29.24 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=50.8
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSKQ 91 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~a---~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~~ 91 (424)
......|+.+++.+.. ....++ +.|...++++|++|+|...-..-.+++++|- ..|+ .++.++. +++. ..+
T Consensus 148 ~~~~~~P~~~~~~~aa-l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~-~~~ 222 (370)
T 4ej6_A 148 KQAFEIPLTLDPVHGA-FCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLAR-LAGATTVILSTR--QATK-RRL 222 (370)
T ss_dssp GGEEEECTTSCTTGGG-GHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECS--CHHH-HHH
T ss_pred hhEEECCCCCCHHHHh-hhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHH-HHH
Confidence 3444566667766543 221222 2345668999999999987556666666665 5788 6665554 3333 456
Q ss_pred HHhcCCeEEEE
Q 014435 92 VKDSNPKLVIT 102 (424)
Q Consensus 92 l~~~~~~~ii~ 102 (424)
+++.+++.++.
T Consensus 223 a~~lGa~~vi~ 233 (370)
T 4ej6_A 223 AEEVGATATVD 233 (370)
T ss_dssp HHHHTCSEEEC
T ss_pred HHHcCCCEEEC
Confidence 67788887764
No 108
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=37.69 E-value=68 Score=28.54 Aligned_cols=84 Identities=13% Similarity=0.196 Sum_probs=51.8
Q ss_pred CCCCCCCCCCcHHHHHHHH--HHHHH-HH-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIV--IKVSH-SF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~--~~~a~-~L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+..... -..|. .+ ...++++|++|++...-+.-.+++++|-. .|+ .++.++. +++. ..
T Consensus 154 ~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~~Vi~~~~--~~~~-~~ 229 (371)
T 1f8f_A 154 NNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-CGASIIIAVDI--VESR-LE 229 (371)
T ss_dssp GGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-HTCSEEEEEES--CHHH-HH
T ss_pred hheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECC--CHHH-HH
Confidence 3445567788887753322 22222 23 34589999999999865566677666654 587 4555543 3333 34
Q ss_pred HHHhcCCeEEEEc
Q 014435 91 QVKDSNPKLVITV 103 (424)
Q Consensus 91 ~l~~~~~~~ii~~ 103 (424)
+++..+++.++..
T Consensus 230 ~a~~lGa~~vi~~ 242 (371)
T 1f8f_A 230 LAKQLGATHVINS 242 (371)
T ss_dssp HHHHHTCSEEEET
T ss_pred HHHHcCCCEEecC
Confidence 5577888877754
No 109
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=37.39 E-value=1e+02 Score=27.11 Aligned_cols=85 Identities=16% Similarity=0.116 Sum_probs=53.9
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHH---HH-HHcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKVSH---SF-RHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELS 89 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~a~---~L-~~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~ 89 (424)
.......|+.+++.+........+. .| ...++++|++|+|.... .+-..++.+|. ..|+.++.... +++.+
T Consensus 130 ~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~- 205 (353)
T 4dup_A 130 AGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLAR-AFGAEVYATAG--STGKC- 205 (353)
T ss_dssp GGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHH-
T ss_pred HHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHH-
Confidence 3445567888999887544333332 23 34589999999999554 46666666554 67988776653 34443
Q ss_pred HHHHhcCCeEEEEc
Q 014435 90 KQVKDSNPKLVITV 103 (424)
Q Consensus 90 ~~l~~~~~~~ii~~ 103 (424)
..+++.+++.++..
T Consensus 206 ~~~~~lGa~~~~~~ 219 (353)
T 4dup_A 206 EACERLGAKRGINY 219 (353)
T ss_dssp HHHHHHTCSEEEET
T ss_pred HHHHhcCCCEEEeC
Confidence 45566788777653
No 110
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=37.34 E-value=98 Score=24.87 Aligned_cols=80 Identities=8% Similarity=-0.015 Sum_probs=42.6
Q ss_pred CcHHHHHHHHHHHHHHHHH-------cCCCCCCEEEEECCCC----ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHH
Q 014435 25 PSFSMFKSIVIKVSHSFRH-------LGITKKDVVLIFAPNS----IHFPICFLGVIAIGAIASTANPVYTVSELSKQVK 93 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~-------~gi~~g~~V~l~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~ 93 (424)
++..|++..+..+-..+.. ..-...-+|.+..+.+ +-..++...+-..|..++-+....+.+++...++
T Consensus 57 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~ 136 (210)
T 1y80_A 57 MFVPEVLMSANAMNAGVEVVKQSQQAFDMPSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVK 136 (210)
T ss_dssp ----------------------------CCCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHhccccCCCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 5666665555444443321 1112233566654432 3344455555678999999999999999999999
Q ss_pred hcCCeEEEEcc
Q 014435 94 DSNPKLVITVP 104 (424)
Q Consensus 94 ~~~~~~ii~~~ 104 (424)
+.++++|..+.
T Consensus 137 ~~~~d~v~lS~ 147 (210)
T 1y80_A 137 KYQPDIVGMSA 147 (210)
T ss_dssp HHCCSEEEEEC
T ss_pred HcCCCEEEEec
Confidence 99999999864
No 111
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=36.28 E-value=69 Score=29.44 Aligned_cols=84 Identities=14% Similarity=0.111 Sum_probs=54.1
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHH--HH-HHH---HcCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKV--SH-SFR---HLGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVSE 87 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~--a~-~L~---~~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 87 (424)
.......|+.+++.+........ |. .|. ..++++|++|+|... ..+-.+++.+|. ..|+.++.+.. +++.
T Consensus 181 ~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~-~~Ga~vi~~~~--~~~~ 257 (447)
T 4a0s_A 181 ASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVK-NGGGIPVAVVS--SAQK 257 (447)
T ss_dssp GGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEES--SHHH
T ss_pred HHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEeC--CHHH
Confidence 34455678889998876433222 22 232 258999999999987 456666666655 57887776653 4444
Q ss_pred HHHHHHhcCCeEEEE
Q 014435 88 LSKQVKDSNPKLVIT 102 (424)
Q Consensus 88 i~~~l~~~~~~~ii~ 102 (424)
+. .+++.+++.++.
T Consensus 258 ~~-~~~~lGa~~~i~ 271 (447)
T 4a0s_A 258 EA-AVRALGCDLVIN 271 (447)
T ss_dssp HH-HHHHTTCCCEEE
T ss_pred HH-HHHhcCCCEEEe
Confidence 44 457788877664
No 112
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=35.33 E-value=1.2e+02 Score=27.20 Aligned_cols=60 Identities=8% Similarity=0.052 Sum_probs=40.0
Q ss_pred CCCCCCEEEEECCCCcc------HHHHHHHHH-HhCCeEecCCCC------------CCHHHHHHHHHhcCCeEEEEcc
Q 014435 45 GITKKDVVLIFAPNSIH------FPICFLGVI-AIGAIASTANPV------------YTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~------~~~~~lA~~-~~G~~~v~l~~~------------~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
-+++||+|+|++|.+.- -+-.....+ ..|..++.-+.. ...+++..++++-++++|++..
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~r 117 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTI 117 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 58999999999999752 222222223 368887754321 1235677777778899999975
No 113
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=35.16 E-value=1.3e+02 Score=26.47 Aligned_cols=63 Identities=13% Similarity=-0.011 Sum_probs=42.8
Q ss_pred HHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 42 RHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 42 ~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
.+.| +++|+.|..... +=.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 70 ~~~g~~~~g~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 70 IKDGRLKPGMEIIESTS-GNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp HHHTSSCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 3445 467776655543 55556677777889987776555444455567889999999999753
No 114
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=34.98 E-value=1.2e+02 Score=26.15 Aligned_cols=63 Identities=16% Similarity=-0.022 Sum_probs=43.1
Q ss_pred HHcCC-CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 42 RHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 42 ~~~gi-~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
.+.|. ++++.|... ..+=.-..+.++|.+.|..++.+=|...+..-...++..++++++++.+
T Consensus 54 ~~~g~~~~~~~vv~~-ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 54 EKDGTLTKGKEIVDA-TSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHTTSSCTTCEEEES-CCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44454 666655554 3566666777788899987766555444455567889999999998764
No 115
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=34.97 E-value=59 Score=34.87 Aligned_cols=83 Identities=10% Similarity=0.170 Sum_probs=62.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHH-HHHHHHHhCCeEecCCC--CCCHHHHHHHHHhcCCeEEE
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI-CFLGVIAIGAIASTANP--VYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~-~~lA~~~~G~~~v~l~~--~~~~~~i~~~l~~~~~~~ii 101 (424)
+|.+.+... .......++.++|++....+-+.+..+ -+++.+..|+.++..++ ..++..+...+++.+++++.
T Consensus 627 ~~h~~l~~~----~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~ 702 (1304)
T 2vsq_A 627 TTHANIQGL----VKHVDYMAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMF 702 (1304)
T ss_dssp EEHHHHHHH----HSSCCSSCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEE
T ss_pred EehHHHHHH----HHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEE
Confidence 677776532 222234588999999988888776544 47888899999988876 35788999999999999999
Q ss_pred EcccchHHHh
Q 014435 102 TVPELWDKVK 111 (424)
Q Consensus 102 ~~~~~~~~~~ 111 (424)
..+..+..+.
T Consensus 703 ~~p~~~~~l~ 712 (1304)
T 2vsq_A 703 ATTALFNLLT 712 (1304)
T ss_dssp EEHHHHHHHH
T ss_pred ccHHHHHHHH
Confidence 9887666553
No 116
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=34.13 E-value=1.7e+02 Score=25.03 Aligned_cols=62 Identities=13% Similarity=0.049 Sum_probs=43.4
Q ss_pred HHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 42 RHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 42 ~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
.+.| +++|+.|.... .+=.-..+.++|.+.|..++.+-|...+..-...++..++++++++.
T Consensus 53 ~~~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~ 115 (303)
T 2v03_A 53 EKRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTK 115 (303)
T ss_dssp HHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred HHcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 3445 46777666654 45556667777889998877665554445556788999999999985
No 117
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=33.99 E-value=75 Score=20.86 Aligned_cols=44 Identities=11% Similarity=0.009 Sum_probs=31.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe
Q 014435 25 PSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 75 (424)
Q Consensus 25 ~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~ 75 (424)
+.+.++.+ .+.+.++.++..|.++|..+.....+...+...|..
T Consensus 24 ip~~~l~~-------~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 24 IPLKEVKE-------RIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp CCHHHHHH-------HHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHH-------HHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCC
Confidence 55666543 344556778889999999888777777777777753
No 118
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=33.97 E-value=1.2e+02 Score=26.67 Aligned_cols=8 Identities=13% Similarity=0.364 Sum_probs=3.5
Q ss_pred CCCEEEEE
Q 014435 48 KKDVVLIF 55 (424)
Q Consensus 48 ~g~~V~l~ 55 (424)
+||.|.+.
T Consensus 88 ~gd~vl~~ 95 (384)
T 1eg5_A 88 RKRTIITT 95 (384)
T ss_dssp TCCEEEEC
T ss_pred CCCEEEEC
Confidence 44444443
No 119
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=33.95 E-value=85 Score=27.77 Aligned_cols=84 Identities=10% Similarity=0.032 Sum_probs=52.5
Q ss_pred CCCCCCCCCCcHHHHHHHHHH--H-HHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIK--V-SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~--~-a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
......|+.+++.+....... . .+.|.+.++++|++|+|......-.+++.+|-. .|+.++.+...-. . ...+
T Consensus 144 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~-~Ga~Vi~~~~~~~--~-~~~~ 219 (360)
T 1piw_A 144 HFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKA-MGAETYVISRSSR--K-REDA 219 (360)
T ss_dssp GGEEECCTTSCHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESSST--T-HHHH
T ss_pred hheEECCCCCCHHHhhhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCHH--H-HHHH
Confidence 344557788998875322211 1 233455789999999999985567777776654 6887665554322 2 2334
Q ss_pred HhcCCeEEEEc
Q 014435 93 KDSNPKLVITV 103 (424)
Q Consensus 93 ~~~~~~~ii~~ 103 (424)
++.+++.++..
T Consensus 220 ~~lGa~~v~~~ 230 (360)
T 1piw_A 220 MKMGADHYIAT 230 (360)
T ss_dssp HHHTCSEEEEG
T ss_pred HHcCCCEEEcC
Confidence 55778877654
No 120
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=33.94 E-value=43 Score=30.25 Aligned_cols=77 Identities=14% Similarity=0.089 Sum_probs=47.5
Q ss_pred CCCCCCCCcHHH----HHHHHHH--HH-HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHH
Q 014435 18 PLVLPSDPSFSM----FKSIVIK--VS-HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELS 89 (424)
Q Consensus 18 ~~~~~~~~Ty~e----l~~~~~~--~a-~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~ 89 (424)
....|+.+++.+ ....... .| +.|...++++|++|++...-..-.+++++|-. .|+ .++.++. +++.+
T Consensus 148 ~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~--~~~~~- 223 (398)
T 2dph_A 148 LLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARL-LGAACVIVGDQ--NPERL- 223 (398)
T ss_dssp CEECSSHHHHHHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEES--CHHHH-
T ss_pred EEECCCCCChhhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcC--CHHHH-
Confidence 445677778776 2211111 11 23456689999999999875567777777654 687 5655543 33443
Q ss_pred HHHHhcCCe
Q 014435 90 KQVKDSNPK 98 (424)
Q Consensus 90 ~~l~~~~~~ 98 (424)
.++++.+++
T Consensus 224 ~~a~~lGa~ 232 (398)
T 2dph_A 224 KLLSDAGFE 232 (398)
T ss_dssp HHHHTTTCE
T ss_pred HHHHHcCCc
Confidence 456778886
No 121
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=33.92 E-value=98 Score=27.53 Aligned_cols=84 Identities=7% Similarity=-0.043 Sum_probs=52.3
Q ss_pred CCCCCCCCCCcHHHHHHHHHH--HHH-HH-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIK--VSH-SF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~--~a~-~L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+....... .|. .+ ...++++|++|+|...-..-.+++++|- ..|+ .++.++.. ++. ..
T Consensus 159 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~--~~~-~~ 234 (376)
T 1e3i_A 159 ANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCK-IAGASRIIAIDIN--GEK-FP 234 (376)
T ss_dssp GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSC--GGG-HH
T ss_pred ccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCC--HHH-HH
Confidence 445567888999886543222 222 13 3458999999999986556666666665 4688 55555432 222 33
Q ss_pred HHHhcCCeEEEEc
Q 014435 91 QVKDSNPKLVITV 103 (424)
Q Consensus 91 ~l~~~~~~~ii~~ 103 (424)
++++.+++.++..
T Consensus 235 ~a~~lGa~~vi~~ 247 (376)
T 1e3i_A 235 KAKALGATDCLNP 247 (376)
T ss_dssp HHHHTTCSEEECG
T ss_pred HHHHhCCcEEEcc
Confidence 4567888877643
No 122
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=33.88 E-value=2e+02 Score=24.80 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHcC-CCCCCEEEEECCCCccHHHHHHHHHHh----C---CeEecCCCCCC------HHHHHHHHHhcCCe
Q 014435 33 IVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAI----G---AIASTANPVYT------VSELSKQVKDSNPK 98 (424)
Q Consensus 33 ~~~~~a~~L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~----G---~~~v~l~~~~~------~~~i~~~l~~~~~~ 98 (424)
...++...+.+.+ +.++++|++...-+.|..+++..+.+. | ..++.+|..+. .+.+..+.+..+..
T Consensus 7 ~~~~~~~~i~~~~l~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~ 86 (317)
T 1wy5_A 7 VIRKVLALQNDEKIFSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMK 86 (317)
T ss_dssp HHHHHHHHHHHHCSCSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCc
Confidence 4456677777654 578899999999999999998888764 4 45667777653 23356777788888
Q ss_pred EEEEccc
Q 014435 99 LVITVPE 105 (424)
Q Consensus 99 ~ii~~~~ 105 (424)
+.+.+-+
T Consensus 87 ~~v~~~~ 93 (317)
T 1wy5_A 87 IFVGKED 93 (317)
T ss_dssp EEEEECC
T ss_pred EEEEEEe
Confidence 7776543
No 123
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=33.79 E-value=1.8e+02 Score=24.83 Aligned_cols=63 Identities=17% Similarity=0.104 Sum_probs=42.4
Q ss_pred HHcC-CCCCC--EEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 42 RHLG-ITKKD--VVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 42 ~~~g-i~~g~--~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
.+.| +++|+ .|.. ...+=.-..+.++|.+.|..++.+-|...+..-...++..++++++++.+
T Consensus 52 ~~~g~~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 52 EERGILRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPE 117 (304)
T ss_dssp HHTTSCCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCCCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3445 46666 4444 44555666677778899987776555444455567789999999999764
No 124
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=33.78 E-value=1.3e+02 Score=25.86 Aligned_cols=63 Identities=16% Similarity=0.026 Sum_probs=42.2
Q ss_pred HHcCC-CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 42 RHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 42 ~~~gi-~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
.+.|. ++|+.|.. ...+=.-..+.++|.+.|..++.+=|...+..-...++..++++++++.+
T Consensus 57 ~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 57 EKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGA 120 (308)
T ss_dssp HHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 34453 66665554 44455566677778889987776555444444566779999999999764
No 125
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=33.68 E-value=2e+02 Score=24.80 Aligned_cols=83 Identities=19% Similarity=0.208 Sum_probs=51.0
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHH---HHH-HcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKVSH---SFR-HLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~a~---~L~-~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+........+. .|. ..++++|++|.+.... ++-..++.++. ..|+.++.++. +++.+.
T Consensus 104 ~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~-~~G~~V~~~~~--~~~~~~- 179 (327)
T 1qor_A 104 DKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAK-ALGAKLIGTVG--TAQKAQ- 179 (327)
T ss_dssp GGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHH-HHTCEEEEEES--SHHHHH-
T ss_pred HHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-
Confidence 345567888999886444333332 233 3489999999999854 45555555554 56887766544 344433
Q ss_pred HHHhcCCeEEEE
Q 014435 91 QVKDSNPKLVIT 102 (424)
Q Consensus 91 ~l~~~~~~~ii~ 102 (424)
.+++.+++.++.
T Consensus 180 ~~~~~g~~~~~~ 191 (327)
T 1qor_A 180 SALKAGAWQVIN 191 (327)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHcCCCEEEE
Confidence 344567766654
No 126
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=33.66 E-value=1.2e+02 Score=27.66 Aligned_cols=52 Identities=8% Similarity=0.040 Sum_probs=23.8
Q ss_pred EECCCCccHHH-HHHHHHHhCCeEecCCCCCCHH--HHHHHHHhcCCeEEEEccc
Q 014435 54 IFAPNSIHFPI-CFLGVIAIGAIASTANPVYTVS--ELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 54 l~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~--~i~~~l~~~~~~~ii~~~~ 105 (424)
++..++.+.+. ++.++.+.|-.++..++.+... .+...++..+.+++.++.+
T Consensus 101 v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~ 155 (430)
T 3ri6_A 101 LALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM 155 (430)
T ss_dssp EEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred EEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 34444443333 2333444454555445544332 1222555666666666544
No 127
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=33.36 E-value=57 Score=29.09 Aligned_cols=85 Identities=7% Similarity=-0.009 Sum_probs=52.9
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHH--HH-HH-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKV--SH-SF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELS 89 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~--a~-~L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~ 89 (424)
.......|+.+++.+........ |. .+ ...++++|++|+|...-..-.+++++|-. .|+ .++.++.. ++. .
T Consensus 153 ~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-~Ga~~Vi~~~~~--~~~-~ 228 (373)
T 2fzw_A 153 DISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-AGASRIIGVDIN--KDK-F 228 (373)
T ss_dssp GGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSC--GGG-H
T ss_pred hhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCC--HHH-H
Confidence 34455678889998765433222 22 23 34589999999999875567777777654 587 56555432 222 2
Q ss_pred HHHHhcCCeEEEEc
Q 014435 90 KQVKDSNPKLVITV 103 (424)
Q Consensus 90 ~~l~~~~~~~ii~~ 103 (424)
.++++.+++.++..
T Consensus 229 ~~~~~lGa~~vi~~ 242 (373)
T 2fzw_A 229 ARAKEFGATECINP 242 (373)
T ss_dssp HHHHHHTCSEEECG
T ss_pred HHHHHcCCceEecc
Confidence 34566788777643
No 128
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=33.36 E-value=1.1e+02 Score=26.97 Aligned_cols=55 Identities=9% Similarity=0.208 Sum_probs=34.7
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-------CCHHHHHHHHHhcCCeEEEEc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-------YTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+++||.|.+..|... ....++...|+.++.++.. ...+++...+++.++++|+..
T Consensus 106 ~~~gd~vl~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~ 167 (391)
T 3dzz_A 106 TSPGDQILVQEPVYN---MFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFC 167 (391)
T ss_dssp SCTTCEEEECSSCCH---HHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEE
T ss_pred CCCCCeEEECCCCcH---HHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEE
Confidence 457787765544332 2334556678777766542 677888888876677776553
No 129
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=33.13 E-value=1.1e+02 Score=26.84 Aligned_cols=83 Identities=14% Similarity=0.081 Sum_probs=51.3
Q ss_pred CCCCCCCCCCcHHHHHHHHHHH--HH-HH-HHcCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKV--SH-SF-RHLGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~--a~-~L-~~~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+........ |. .| ...++++|++|+|... .++-..++.++. ..|+.++.++. +++.+..
T Consensus 126 ~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~~ 202 (354)
T 2j8z_A 126 GLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAG--SQKKLQM 202 (354)
T ss_dssp GGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEES--CHHHHHH
T ss_pred HHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHH-HcCCEEEEEeC--CHHHHHH
Confidence 4455678889998864333222 22 23 2458999999999985 456666666554 57887766554 3444443
Q ss_pred HHHhcCCeEEEE
Q 014435 91 QVKDSNPKLVIT 102 (424)
Q Consensus 91 ~l~~~~~~~ii~ 102 (424)
+++.+++.++.
T Consensus 203 -~~~~g~~~~~~ 213 (354)
T 2j8z_A 203 -AEKLGAAAGFN 213 (354)
T ss_dssp -HHHHTCSEEEE
T ss_pred -HHHcCCcEEEe
Confidence 36667776553
No 130
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=33.05 E-value=1.3e+02 Score=26.21 Aligned_cols=86 Identities=13% Similarity=0.067 Sum_probs=54.1
Q ss_pred cCCCCCCCCCCCcHHHHHH---HHHHHHHHH-HHcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKS---IVIKVSHSF-RHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSEL 88 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~---~~~~~a~~L-~~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i 88 (424)
+.......|+.+++.+... ........+ ...++++|++|++.... ++-..++.+|. ..|+.++.+...-. .
T Consensus 106 ~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~--~- 181 (340)
T 3gms_A 106 SADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQ-ILNFRLIAVTRNNK--H- 181 (340)
T ss_dssp EGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEESSST--T-
T ss_pred CHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHH-HcCCEEEEEeCCHH--H-
Confidence 3344556788899988652 111222223 34589999999999887 57777777665 56888776654322 2
Q ss_pred HHHHHhcCCeEEEEc
Q 014435 89 SKQVKDSNPKLVITV 103 (424)
Q Consensus 89 ~~~l~~~~~~~ii~~ 103 (424)
...+++.+++.++..
T Consensus 182 ~~~~~~lga~~~~~~ 196 (340)
T 3gms_A 182 TEELLRLGAAYVIDT 196 (340)
T ss_dssp HHHHHHHTCSEEEET
T ss_pred HHHHHhCCCcEEEeC
Confidence 233455778777653
No 131
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=32.86 E-value=2.2e+02 Score=26.77 Aligned_cols=86 Identities=6% Similarity=-0.074 Sum_probs=62.5
Q ss_pred hhhcHHHHHHHHHHHHhhhhhcc-CCCcEEEEecchHHHHHHHHHHHHHhhcCceEEecCC-CC-------HHHHHHHHH
Q 014435 180 VILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FD-------IEMALRAIE 250 (424)
Q Consensus 180 v~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~-------~~~~~~~i~ 250 (424)
-.+|.+.+...+..++....... .+.+++...++-+.. +...+++++..|+..+..+. +. ...+...++
T Consensus 48 ~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~ 125 (576)
T 3gqw_A 48 DQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSE--FVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLA 125 (576)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHH--HHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHH
T ss_pred eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHH
Confidence 35788888888877766654332 344888888776553 34467889999999887753 33 688889999
Q ss_pred HccceEEEechHHHHHH
Q 014435 251 KYRVTVWWVVPPIILAL 267 (424)
Q Consensus 251 ~~~~t~~~~~p~~~~~l 267 (424)
+.++..++........+
T Consensus 126 ~~~~~~ii~~~~~~~~~ 142 (576)
T 3gqw_A 126 SCQPAAIITGDEWLPLV 142 (576)
T ss_dssp HHCCSEEEECGGGHHHH
T ss_pred hcCCCEEEecHHHHHHH
Confidence 99999999887655443
No 132
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=32.22 E-value=2.6e+02 Score=24.48 Aligned_cols=84 Identities=15% Similarity=0.152 Sum_probs=51.9
Q ss_pred CCCCCCCCCCCcHHHHHHHHHH--HHH-HHH-HcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIK--VSH-SFR-HLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELS 89 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~--~a~-~L~-~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~ 89 (424)
.......|+.+++.+....... .|. .|. ..++++|++|+|.... ++-..++.++. ..|+.++.+.. +++.+.
T Consensus 133 ~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~ 209 (351)
T 1yb5_A 133 DHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIAR-AYGLKILGTAG--TEEGQK 209 (351)
T ss_dssp GGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEES--SHHHHH
T ss_pred HHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeC--ChhHHH
Confidence 3445567888999885433222 222 233 4589999999999974 45665555554 57887665543 344443
Q ss_pred HHHHhcCCeEEEE
Q 014435 90 KQVKDSNPKLVIT 102 (424)
Q Consensus 90 ~~l~~~~~~~ii~ 102 (424)
.++..+++.++.
T Consensus 210 -~~~~~ga~~~~d 221 (351)
T 1yb5_A 210 -IVLQNGAHEVFN 221 (351)
T ss_dssp -HHHHTTCSEEEE
T ss_pred -HHHHcCCCEEEe
Confidence 556777776553
No 133
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=31.71 E-value=1.8e+02 Score=25.21 Aligned_cols=55 Identities=9% Similarity=0.056 Sum_probs=32.9
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCC--C----CCCHHHHHHHHHh----cCCeEEEEc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN--P----VYTVSELSKQVKD----SNPKLVITV 103 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~--~----~~~~~~i~~~l~~----~~~~~ii~~ 103 (424)
+++||.|.+..+...... .++...|+.++.++ . ....+++...+++ -++++++..
T Consensus 90 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~ 154 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSY---VAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALIT 154 (371)
T ss_dssp CCTTCEEEEETTCCHHHH---HHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEE
T ss_pred hCCCCEEEEccCcchHHH---HHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEE
Confidence 567887777655443333 23566787776665 2 2367778777764 355665554
No 134
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=31.55 E-value=63 Score=28.82 Aligned_cols=84 Identities=5% Similarity=-0.034 Sum_probs=51.9
Q ss_pred CCCCCCCCCCcHHHHHHHHHH--HHH-HH-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIK--VSH-SF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~--~a~-~L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+....... .|. .+ ...++++|++|+|...-+.-.+++++|-. .|+ .++.++.. ++. ..
T Consensus 156 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~--~~~-~~ 231 (374)
T 1cdo_A 156 IAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHS-AGAKRIIAVDLN--PDK-FE 231 (374)
T ss_dssp GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSC--GGG-HH
T ss_pred hheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCC--HHH-HH
Confidence 445567888999876543322 222 13 34589999999999865566666666654 687 55555432 222 23
Q ss_pred HHHhcCCeEEEEc
Q 014435 91 QVKDSNPKLVITV 103 (424)
Q Consensus 91 ~l~~~~~~~ii~~ 103 (424)
++++.+++.++..
T Consensus 232 ~~~~lGa~~vi~~ 244 (374)
T 1cdo_A 232 KAKVFGATDFVNP 244 (374)
T ss_dssp HHHHTTCCEEECG
T ss_pred HHHHhCCceEEec
Confidence 4567788777643
No 135
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=31.02 E-value=86 Score=27.50 Aligned_cols=85 Identities=13% Similarity=0.157 Sum_probs=53.8
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHH---HH-HHcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKVSH---SF-RHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELS 89 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~a~---~L-~~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~ 89 (424)
.......++.+++.+........+. .| ...++++|++|+|.... .+-..++.+|. ..|+.++.+... .+.+
T Consensus 122 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~-~~Ga~Vi~~~~~--~~~~- 197 (342)
T 4eye_A 122 PSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAK-GMGAKVIAVVNR--TAAT- 197 (342)
T ss_dssp GGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESS--GGGH-
T ss_pred HHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEeCC--HHHH-
Confidence 3345567888999887544433332 23 34479999999999884 56666666655 578877766542 2222
Q ss_pred HHHHhcCCeEEEEc
Q 014435 90 KQVKDSNPKLVITV 103 (424)
Q Consensus 90 ~~l~~~~~~~ii~~ 103 (424)
..+++.+++.++..
T Consensus 198 ~~~~~~ga~~v~~~ 211 (342)
T 4eye_A 198 EFVKSVGADIVLPL 211 (342)
T ss_dssp HHHHHHTCSEEEES
T ss_pred HHHHhcCCcEEecC
Confidence 44556777776644
No 136
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=31.02 E-value=1.6e+02 Score=27.19 Aligned_cols=70 Identities=7% Similarity=0.016 Sum_probs=53.3
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCCCccHHHHHHHHHH----hC--CeEecCCCCCC-H------HHHHHHHHhcCCeEEE
Q 014435 36 KVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIA----IG--AIASTANPVYT-V------SELSKQVKDSNPKLVI 101 (424)
Q Consensus 36 ~~a~~L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~----~G--~~~v~l~~~~~-~------~~i~~~l~~~~~~~ii 101 (424)
++...+.+.+ +.++++|++...-+.|.++++..+.. .| ..++.++..+. . +.+..+++..+..+.+
T Consensus 4 kv~~~i~~~~l~~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v 83 (464)
T 3a2k_A 4 KVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCET 83 (464)
T ss_dssp HHHHHHHHTCSSSCSSBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCCCCCEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEE
Confidence 4566677765 57899999999999999999888876 34 56777887775 2 3467788888998888
Q ss_pred Eccc
Q 014435 102 TVPE 105 (424)
Q Consensus 102 ~~~~ 105 (424)
.+-+
T Consensus 84 ~~~~ 87 (464)
T 3a2k_A 84 AQID 87 (464)
T ss_dssp EECC
T ss_pred EEec
Confidence 7654
No 137
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=30.98 E-value=1.7e+02 Score=25.50 Aligned_cols=84 Identities=8% Similarity=0.053 Sum_probs=51.6
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHH--HH-HHHHHcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIK--VS-HSFRHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELS 89 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~--~a-~~L~~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~ 89 (424)
+.......|+.+++.+....... .| +.|.+.++++|++|.+.... ++-..++.++. ..|+.++.++.+.. .+
T Consensus 132 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~-~~Ga~V~~~~~~~~--~~- 207 (347)
T 2hcy_A 132 DAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAK-AMGYRVLGIDGGEG--KE- 207 (347)
T ss_dssp ETTTSEEECTTCCHHHHGGGGTHHHHHHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSTT--HH-
T ss_pred ccccEEECCCCCCHHHHHHHhhhHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHH-HCCCcEEEEcCCHH--HH-
Confidence 34555667888999875332211 12 33555689999999999985 46666665554 56887766654322 22
Q ss_pred HHHHhcCCeEEE
Q 014435 90 KQVKDSNPKLVI 101 (424)
Q Consensus 90 ~~l~~~~~~~ii 101 (424)
..++..+++.++
T Consensus 208 ~~~~~~g~~~~~ 219 (347)
T 2hcy_A 208 ELFRSIGGEVFI 219 (347)
T ss_dssp HHHHHTTCCEEE
T ss_pred HHHHHcCCceEE
Confidence 344556666555
No 138
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=30.79 E-value=2.4e+02 Score=24.55 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=51.9
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHH---HHHH-cCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKVSH---SFRH-LGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~a~---~L~~-~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+........+. .|.+ .++++|++|++.... +.-..++.++. ..|+.++.+.. +++.+.
T Consensus 130 ~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~-~~G~~Vi~~~~--~~~~~~- 205 (343)
T 2eih_A 130 ANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAK-LFGARVIATAG--SEDKLR- 205 (343)
T ss_dssp GGEEECCTTSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHH-HTTCEEEEEES--SHHHHH-
T ss_pred HHeEECCCCCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeC--CHHHHH-
Confidence 344557888999886644443332 2334 389999999999884 56666666655 56887666543 344443
Q ss_pred HHHhcCCeEEEE
Q 014435 91 QVKDSNPKLVIT 102 (424)
Q Consensus 91 ~l~~~~~~~ii~ 102 (424)
.++..+++.++.
T Consensus 206 ~~~~~ga~~~~d 217 (343)
T 2eih_A 206 RAKALGADETVN 217 (343)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHhcCCCEEEc
Confidence 345567766553
No 139
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=30.57 E-value=1.1e+02 Score=27.15 Aligned_cols=56 Identities=20% Similarity=0.234 Sum_probs=30.4
Q ss_pred cCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC--C---CCHHHHHHHHHhcCCeEEEEc
Q 014435 44 LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--V---YTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 44 ~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~---~~~~~i~~~l~~~~~~~ii~~ 103 (424)
.++++||.|.+..+..... ..++...|+.++.++. . ...+++...++. ++++|+..
T Consensus 74 ~~~~~gd~Vl~~~~~~~~~---~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 134 (393)
T 1mdo_A 74 LGIGEGDEVITPSMTWVST---LNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPV 134 (393)
T ss_dssp TTCCTTCEEEEESSSCHHH---HHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB
T ss_pred cCCCCCCEEEeCCCccHhH---HHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEe
Confidence 3467777776655543332 2344556766654442 1 456666666653 45666554
No 140
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=30.57 E-value=66 Score=28.69 Aligned_cols=83 Identities=8% Similarity=0.025 Sum_probs=51.5
Q ss_pred CCCCCCCCCCcHHHHHHHHHH--HHH-HH-HHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIK--VSH-SF-RHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~--~a~-~L-~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+....... .|. .+ ...++++|++|+|...-..-.+++++|-. .|+ .++.++.. ++. ..
T Consensus 155 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~--~~~-~~ 230 (374)
T 2jhf_A 155 ISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKA-AGAARIIGVDIN--KDK-FA 230 (374)
T ss_dssp GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSC--GGG-HH
T ss_pred HHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCC--HHH-HH
Confidence 445567888999876543322 222 13 34589999999999865566666666654 687 55555432 222 23
Q ss_pred HHHhcCCeEEEE
Q 014435 91 QVKDSNPKLVIT 102 (424)
Q Consensus 91 ~l~~~~~~~ii~ 102 (424)
.+++.+++.++.
T Consensus 231 ~~~~lGa~~vi~ 242 (374)
T 2jhf_A 231 KAKEVGATECVN 242 (374)
T ss_dssp HHHHTTCSEEEC
T ss_pred HHHHhCCceEec
Confidence 456778877664
No 141
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=29.95 E-value=2.3e+02 Score=25.06 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=36.4
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhc---CCeEEEEcc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDS---NPKLVITVP 104 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~---~~~~ii~~~ 104 (424)
+++||.|.+..|....+ ..++...|+.+++++. ...+++...++.. +++++++..
T Consensus 124 ~~~gd~V~~~~p~~~~~---~~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDHASI---IDGSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCCHHH---HHHHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccCHHH---HHHHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 46788877776543332 3445567888877764 5677888888765 567777654
No 142
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=29.92 E-value=2.4e+02 Score=24.41 Aligned_cols=83 Identities=14% Similarity=0.151 Sum_probs=50.7
Q ss_pred CCCCCCCCCCcHHH--HHHHHHHHH---HHHH-HcCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHHHH
Q 014435 16 RPPLVLPSDPSFSM--FKSIVIKVS---HSFR-HLGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVSEL 88 (424)
Q Consensus 16 ~~~~~~~~~~Ty~e--l~~~~~~~a---~~L~-~~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i 88 (424)
......|+.+++.+ ........+ +.|. ..++++|++|.+... .++-..++.++. ..|+.++.+.. +.+.+
T Consensus 107 ~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~-~~G~~Vi~~~~--~~~~~ 183 (333)
T 1wly_A 107 EKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWAR-HLGATVIGTVS--TEEKA 183 (333)
T ss_dssp GGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHH-HTTCEEEEEES--SHHHH
T ss_pred HHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHH-HCCCEEEEEeC--CHHHH
Confidence 44556788889887 333333322 2233 347999999999986 556666666655 56887766654 33343
Q ss_pred HHHHHhcCCeEEEE
Q 014435 89 SKQVKDSNPKLVIT 102 (424)
Q Consensus 89 ~~~l~~~~~~~ii~ 102 (424)
. .+++.+++.++.
T Consensus 184 ~-~~~~~g~~~~~d 196 (333)
T 1wly_A 184 E-TARKLGCHHTIN 196 (333)
T ss_dssp H-HHHHHTCSEEEE
T ss_pred H-HHHHcCCCEEEE
Confidence 3 345567776553
No 143
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=29.66 E-value=38 Score=28.73 Aligned_cols=24 Identities=21% Similarity=0.444 Sum_probs=20.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCC
Q 014435 35 IKVSHSFRHLGITKKDVVLIFAPN 58 (424)
Q Consensus 35 ~~~a~~L~~~gi~~g~~V~l~~~~ 58 (424)
..+.+.|++.||++||.|.++..=
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsSl 41 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSSL 41 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEECT
T ss_pred HHHHHHHHHcCCCCCCEEEEEech
Confidence 456778999999999999998764
No 144
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=29.41 E-value=1.9e+02 Score=25.07 Aligned_cols=64 Identities=20% Similarity=0.079 Sum_probs=43.5
Q ss_pred HHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEccc
Q 014435 42 RHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 42 ~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
.+.| +++|....+....+=.-..+.++|.+.|..++.+-|...+..-...++..++++++++.+
T Consensus 58 ~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 58 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 4556 456643333344566677777888899988776555444455567889999999998753
No 145
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=28.91 E-value=2e+02 Score=25.10 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=51.8
Q ss_pred CCCCCCCCCCcHHHHHHHHHHH--HH-HH-HHcCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKV--SH-SF-RHLGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVSELSK 90 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~--a~-~L-~~~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~ 90 (424)
......|+.+++.+........ |. .| ...++++|++|+|... ..+-.+++.+|. ..|+.++.+ .+.+++ .
T Consensus 114 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~-~~Ga~Vi~~---~~~~~~-~ 188 (343)
T 3gaz_A 114 RLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIAL-ARGARVFAT---ARGSDL-E 188 (343)
T ss_dssp GGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEE---ECHHHH-H
T ss_pred HHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHH-HCCCEEEEE---eCHHHH-H
Confidence 3445578889998865443332 22 23 4458999999999985 456666666665 678877665 245554 4
Q ss_pred HHHhcCCeE
Q 014435 91 QVKDSNPKL 99 (424)
Q Consensus 91 ~l~~~~~~~ 99 (424)
.+++.+++.
T Consensus 189 ~~~~lGa~~ 197 (343)
T 3gaz_A 189 YVRDLGATP 197 (343)
T ss_dssp HHHHHTSEE
T ss_pred HHHHcCCCE
Confidence 567788887
No 146
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=28.77 E-value=1.1e+02 Score=26.41 Aligned_cols=85 Identities=14% Similarity=0.080 Sum_probs=51.6
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHH--H----HHHHHcCCCCCC-EEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHH
Q 014435 15 LRPPLVLPSDPSFSMFKSIVIKV--S----HSFRHLGITKKD-VVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVS 86 (424)
Q Consensus 15 ~~~~~~~~~~~Ty~el~~~~~~~--a----~~L~~~gi~~g~-~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 86 (424)
.......|+.+++.+....-... | ..+.+.++++|+ +|++... .+.-..++++|- ..|+.++.+.... +
T Consensus 109 ~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~-~~Ga~vi~~~~~~--~ 185 (328)
T 1xa0_A 109 GEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLA-KRGYTVEASTGKA--A 185 (328)
T ss_dssp GGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHH-HTTCCEEEEESCT--T
T ss_pred hHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHH-HCCCEEEEEECCH--H
Confidence 34456678889998765432211 1 223456899986 8999887 456666666664 4687766554431 2
Q ss_pred HHHHHHHhcCCeEEEEc
Q 014435 87 ELSKQVKDSNPKLVITV 103 (424)
Q Consensus 87 ~i~~~l~~~~~~~ii~~ 103 (424)
. ...+++.+++.++..
T Consensus 186 ~-~~~~~~lGa~~~i~~ 201 (328)
T 1xa0_A 186 E-HDYLRVLGAKEVLAR 201 (328)
T ss_dssp C-HHHHHHTTCSEEEEC
T ss_pred H-HHHHHHcCCcEEEec
Confidence 2 233456788777643
No 147
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=28.67 E-value=1.7e+02 Score=27.64 Aligned_cols=61 Identities=10% Similarity=0.014 Sum_probs=44.5
Q ss_pred HcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 43 HLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 43 ~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+.| +++|+.|.. ...+=.-..+.++|.+.|..++.+=|...+..-...++..+++++++..
T Consensus 106 ~~g~~~~g~~vv~-~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 167 (527)
T 3pc3_A 106 EQGLLKPGYTIIE-PTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPT 167 (527)
T ss_dssp HHTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred HcCCCCCCCEEEE-eCCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCC
Confidence 445 577887655 4455566777788888998877665655555666888999999999975
No 148
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=28.30 E-value=1.8e+02 Score=22.39 Aligned_cols=33 Identities=15% Similarity=0.322 Sum_probs=13.4
Q ss_pred HHHcCCCCCCEEEEECCCCccHHHHHHHHHHhC
Q 014435 41 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 73 (424)
Q Consensus 41 L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G 73 (424)
|.+.|+.++..+.+...+..+.+.++-=+++.|
T Consensus 92 L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG 124 (161)
T 1oft_A 92 LRRAGLNRERILLLQAKDNAAALALSCEALRLG 124 (161)
T ss_dssp HHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTT
T ss_pred HHHcCCCHHHEEEEECCChHHHHHHHHHHHhcC
Confidence 333444444333333333344444444444444
No 149
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=28.27 E-value=1.8e+02 Score=25.29 Aligned_cols=62 Identities=10% Similarity=-0.017 Sum_probs=44.6
Q ss_pred HHcC-CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 42 RHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 42 ~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
.+.| +++++.|... ..+=.-..+.++|.+.|..++.+-|...+..-...++..++++++++.
T Consensus 65 ~~~g~l~~~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~ 127 (325)
T 3dwg_A 65 EADGLLRPGATILEP-TSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAA 127 (325)
T ss_dssp HHTTCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECS
T ss_pred HHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 3445 5677766554 346666777888888998877665555555566788999999999975
No 150
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=27.76 E-value=64 Score=27.56 Aligned_cols=81 Identities=10% Similarity=0.083 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHH---HHHHHhcCCeEEEE
Q 014435 28 SMFKSIVIKVSHSFRHL--GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSEL---SKQVKDSNPKLVIT 102 (424)
Q Consensus 28 ~el~~~~~~~a~~L~~~--gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i---~~~l~~~~~~~ii~ 102 (424)
.++.++..++-..+++. .+.++.+..+...+.+.++.-.|++-..+..-+.-...-++.++ ...+++.++++|++
T Consensus 139 ~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~ 218 (282)
T 3mfq_A 139 EKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFT 218 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 33444444444444432 44445677777778888887777666554321111112355554 45567789999999
Q ss_pred cccchH
Q 014435 103 VPELWD 108 (424)
Q Consensus 103 ~~~~~~ 108 (424)
++....
T Consensus 219 e~~~~~ 224 (282)
T 3mfq_A 219 ESTTNP 224 (282)
T ss_dssp BTTSCT
T ss_pred eCCCCh
Confidence 876544
No 151
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=27.70 E-value=43 Score=28.55 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=19.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCC
Q 014435 36 KVSHSFRHLGITKKDVVLIFAPN 58 (424)
Q Consensus 36 ~~a~~L~~~gi~~g~~V~l~~~~ 58 (424)
.+.+.|++.||++||.|.+++.=
T Consensus 17 ~L~~~L~~LGI~~Gd~llVHsSl 39 (273)
T 2nyg_A 17 SITEDLKALGLKKGMTVLVHSSL 39 (273)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECS
T ss_pred HHHHHHHHcCCCCCCEEEEEech
Confidence 46678899999999999998764
No 152
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=27.65 E-value=43 Score=28.66 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=22.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC
Q 014435 21 LPSDPSFSMFKSIVIKVSHSFRHLGITKKDVVLIFAPN 58 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~l~~~~ 58 (424)
..+.+|-.+ +.+.|++.||++||.|.+++.=
T Consensus 18 ~~~~~T~~~-------L~~~L~~LGI~~Gd~llVHsSL 48 (286)
T 3sma_A 18 DRELVTRDR-------LASDLAALGVRPGGVLLVHASL 48 (286)
T ss_dssp -CCEECHHH-------HHHHHHHHTCCTTCEEEEEECS
T ss_pred cCCCcCHHH-------HHHHHHHcCCCCCCEEEEEech
Confidence 334466555 4567899999999999998764
No 153
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=27.46 E-value=1.7e+02 Score=21.04 Aligned_cols=37 Identities=14% Similarity=0.254 Sum_probs=21.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC
Q 014435 38 SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 74 (424)
Q Consensus 38 a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~ 74 (424)
+.+|.+.|+.++..+.+...+..+.+.++-=+++.|.
T Consensus 47 ~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~ 83 (119)
T 1ofu_X 47 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGR 83 (119)
T ss_dssp HHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCC
Confidence 3455566666665555555555566666666666654
No 154
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=26.60 E-value=2.4e+02 Score=24.58 Aligned_cols=56 Identities=11% Similarity=0.132 Sum_probs=24.2
Q ss_pred CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC-C----CCHHHHHHHHHhcCCeEEEEc
Q 014435 47 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-V----YTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 47 ~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-~----~~~~~i~~~l~~~~~~~ii~~ 103 (424)
++||.|.+..+..+.... .-++...|+.++.++. . .+.+++...++..++++|+..
T Consensus 84 ~~gd~vlv~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 144 (385)
T 2bkw_A 84 APNKNVLVVSTGTFSDRF-ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVT 144 (385)
T ss_dssp CSCCEEEEECSSHHHHHH-HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEE
T ss_pred CCCCeEEEEcCCcchHHH-HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEE
Confidence 455655444332222211 1223344555544432 1 345566665554344555443
No 155
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=26.54 E-value=1.8e+02 Score=25.19 Aligned_cols=58 Identities=9% Similarity=-0.079 Sum_probs=40.2
Q ss_pred HHcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 42 RHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 42 ~~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
+..++++|++|+|.... ++-..++.++. ..|+.++.+.. +++.+..+.+..+++.++.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~~~~~~~g~~~~~~ 201 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIAR-LKGCRVVGIAG--GAEKCRFLVEELGFDGAID 201 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHHHHHHHTTCCSEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHcCCCEEEE
Confidence 44589999999999884 46666655554 67987766543 4555555557888877664
No 156
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=26.53 E-value=1.6e+02 Score=24.56 Aligned_cols=70 Identities=6% Similarity=-0.043 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhC----CeEecCCCCCC--HHHHHHHHHhcCCeEEEEc
Q 014435 31 KSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG----AIASTANPVYT--VSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 31 ~~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G----~~~v~l~~~~~--~~~i~~~l~~~~~~~ii~~ 103 (424)
.+..+++..+|++. ..+.|++...-+.|..++..-+.+++ ...+.++...+ .+....+.+..++++.+.+
T Consensus 7 ~~~~~~l~~~i~~~---~~~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~~~~~~a~~~a~~lgi~~~~i~ 82 (257)
T 2e18_A 7 DKVIERILEFIREK---GNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFENKDVEDAKLVAEKLGIGYKVIN 82 (257)
T ss_dssp HHHHHHHHHHHHHH---CTTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCSTHHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHHHHh---CCCcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCchHHHHHHHHHHHhCCCEEEEE
Confidence 33445666677765 34568888888999988877777664 34455554433 3455677778888777765
No 157
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=26.27 E-value=3.2e+02 Score=23.71 Aligned_cols=85 Identities=15% Similarity=0.132 Sum_probs=54.4
Q ss_pred CCCCCCCCCCcHHHHHHHHHHH--HH-HH-HHcCCC------CCCEEEEEC-CCCccHHHHHHHHHHhCCeEecCCCCCC
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKV--SH-SF-RHLGIT------KKDVVLIFA-PNSIHFPICFLGVIAIGAIASTANPVYT 84 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~--a~-~L-~~~gi~------~g~~V~l~~-~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 84 (424)
......|+.+++.+....-... |. .| ...+++ +|++|+|.. .-.+-.+++.+|- ..|+.++.+.. +
T Consensus 108 ~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~-~~Ga~Vi~~~~--~ 184 (346)
T 3fbg_A 108 RLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAK-AYGLRVITTAS--R 184 (346)
T ss_dssp GGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEECC--S
T ss_pred HHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHH-HcCCEEEEEeC--C
Confidence 4445577889988875433222 22 23 244777 899999995 5556666666666 67988777654 3
Q ss_pred HHHHHHHHHhcCCeEEEEcc
Q 014435 85 VSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 85 ~~~i~~~l~~~~~~~ii~~~ 104 (424)
++. ...+++.+++.++...
T Consensus 185 ~~~-~~~~~~lGa~~vi~~~ 203 (346)
T 3fbg_A 185 NET-IEWTKKMGADIVLNHK 203 (346)
T ss_dssp HHH-HHHHHHHTCSEEECTT
T ss_pred HHH-HHHHHhcCCcEEEECC
Confidence 444 4455668888877654
No 158
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=26.12 E-value=1.1e+02 Score=27.03 Aligned_cols=79 Identities=13% Similarity=0.051 Sum_probs=49.5
Q ss_pred CCcHHHHHHHH--HHHHH-HHHHc-CCCCC-CEEEEECC-CCccHHHHHHHHHHhCCeEecCCC-CCCHHHHHHHHHhcC
Q 014435 24 DPSFSMFKSIV--IKVSH-SFRHL-GITKK-DVVLIFAP-NSIHFPICFLGVIAIGAIASTANP-VYTVSELSKQVKDSN 96 (424)
Q Consensus 24 ~~Ty~el~~~~--~~~a~-~L~~~-gi~~g-~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~i~~~l~~~~ 96 (424)
.+++.+..... -..|. .|.+. ++++| ++|+|... -..-.+++++|- ..|+.++.+.. ....++....+++.+
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lG 216 (364)
T 1gu7_A 138 GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGK-LLNFNSISVIRDRPNLDEVVASLKELG 216 (364)
T ss_dssp CCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHH-HHTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred CCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHH-HCCCEEEEEecCccccHHHHHHHHhcC
Confidence 68887754332 12232 24443 79999 99999987 557777777766 46887655532 222233445557888
Q ss_pred CeEEEEc
Q 014435 97 PKLVITV 103 (424)
Q Consensus 97 ~~~ii~~ 103 (424)
++.++..
T Consensus 217 a~~vi~~ 223 (364)
T 1gu7_A 217 ATQVITE 223 (364)
T ss_dssp CSEEEEH
T ss_pred CeEEEec
Confidence 8887754
No 159
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=26.10 E-value=1.8e+02 Score=25.90 Aligned_cols=32 Identities=3% Similarity=-0.273 Sum_probs=13.9
Q ss_pred hCCeEecCCCCCCHHHHHHHHHhcCCeEEEEc
Q 014435 72 IGAIASTANPVYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 72 ~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
-|-.++..++.+........++..+.+++.++
T Consensus 85 ~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 116 (416)
T 3isl_A 85 PEDDVLIPIYGRFGYLLTEIAERYGANVHMLE 116 (416)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEecCCcccHHHHHHHHhcCCeeEEEe
Confidence 34344433343333234444555555555443
No 160
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=26.10 E-value=1.6e+02 Score=26.27 Aligned_cols=9 Identities=11% Similarity=0.169 Sum_probs=3.7
Q ss_pred CCCCEEEEE
Q 014435 47 TKKDVVLIF 55 (424)
Q Consensus 47 ~~g~~V~l~ 55 (424)
++||.|.+.
T Consensus 116 ~~gd~Vl~~ 124 (420)
T 1t3i_A 116 KAGDEIITT 124 (420)
T ss_dssp CTTCEEEEE
T ss_pred CCCCEEEEC
Confidence 344444433
No 161
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=25.98 E-value=80 Score=27.47 Aligned_cols=64 Identities=8% Similarity=0.095 Sum_probs=39.7
Q ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHH---HHHHHhcCCeEEEEcccchH
Q 014435 45 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSEL---SKQVKDSNPKLVITVPELWD 108 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i---~~~l~~~~~~~ii~~~~~~~ 108 (424)
.++...+..+...+.+.++.-.|++-..+..-+--...-++.++ ...+++.++++|++++....
T Consensus 192 ~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~ 258 (313)
T 1toa_A 192 SLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPH 258 (313)
T ss_dssp TSCGGGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHTTCSEEEEETTSCT
T ss_pred hCCccCCEEEEECCcHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh
Confidence 34434555666777899888888776555322111223455554 45567789999999876543
No 162
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=25.97 E-value=1.6e+02 Score=25.14 Aligned_cols=85 Identities=14% Similarity=0.058 Sum_probs=51.5
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 014435 14 SLRPPLVLPSDPSFSMFKSIVIKVS---HSFRHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELS 89 (424)
Q Consensus 14 ~~~~~~~~~~~~Ty~el~~~~~~~a---~~L~~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~ 89 (424)
+.......|+.+++.+........+ +.|.+.++++|++|++.... +.-..++.+|. ..|+.++.+..+ ++.+
T Consensus 88 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~G~vG~~~~~~a~-~~Ga~Vi~~~~~--~~~~- 163 (302)
T 1iz0_A 88 PKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AMGLRVLAAASR--PEKL- 163 (302)
T ss_dssp EGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHH-HTTCEEEEEESS--GGGS-
T ss_pred cHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCC--HHHH-
Confidence 3445566788899987643333222 22433459999999999884 45666666554 468876655542 2222
Q ss_pred HHHHhcCCeEEEE
Q 014435 90 KQVKDSNPKLVIT 102 (424)
Q Consensus 90 ~~l~~~~~~~ii~ 102 (424)
..+++.+++.++.
T Consensus 164 ~~~~~~ga~~~~~ 176 (302)
T 1iz0_A 164 ALPLALGAEEAAT 176 (302)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHhcCCCEEEE
Confidence 2345677777664
No 163
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=25.62 E-value=1.4e+02 Score=26.65 Aligned_cols=55 Identities=13% Similarity=0.036 Sum_probs=36.7
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+++||.|.+-.+. +.....++...|+.+++++. ...++++..++..++++++++.
T Consensus 140 ~~~gd~Vl~~~~~---~~~~~~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~vi~~~ 194 (409)
T 3kki_A 140 CQPNTNVYIDFFA---HMSLWEGARYANAQAHPFMH-NNCDHLRMLIQRHGPGIIVVDS 194 (409)
T ss_dssp CCTTCEEEEETTS---CHHHHHHHHHTTCEEEEECT-TCHHHHHHHHHHHCSCEEEEES
T ss_pred cCCCCEEEECCCc---CHHHHHHHHHcCCeEEEecC-CCHHHHHHHHHhcCCeEEEECC
Confidence 4678877764443 33344456667888887754 4678888888876677777764
No 164
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=25.18 E-value=1.6e+02 Score=25.90 Aligned_cols=32 Identities=6% Similarity=-0.023 Sum_probs=16.5
Q ss_pred hCCeEecCCC--C--CCHHHHHHHHHh-cCCeEEEEc
Q 014435 72 IGAIASTANP--V--YTVSELSKQVKD-SNPKLVITV 103 (424)
Q Consensus 72 ~G~~~v~l~~--~--~~~~~i~~~l~~-~~~~~ii~~ 103 (424)
.|+.++.++. . ...+++...+++ -++++|+..
T Consensus 105 ~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~ 141 (392)
T 2z9v_A 105 YSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVC 141 (392)
T ss_dssp HCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred cCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEe
Confidence 4655443332 1 456666666653 245555554
No 165
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=25.01 E-value=1.3e+02 Score=22.41 Aligned_cols=30 Identities=17% Similarity=0.056 Sum_probs=11.8
Q ss_pred HHHHhCCeEecCCCCCCHHHHHHHHHhcCC
Q 014435 68 GVIAIGAIASTANPVYTVSELSKQVKDSNP 97 (424)
Q Consensus 68 A~~~~G~~~v~l~~~~~~~~i~~~l~~~~~ 97 (424)
.|..+|...+.+.+....+++...+++.+.
T Consensus 89 ~~~~~g~~~i~i~~~~~~~~l~~~a~~~Gi 118 (145)
T 2duw_A 89 EAIAIGAKTLWLQLGVINEQAAVLAREAGL 118 (145)
T ss_dssp HHHHHTCCEEECCTTCCCHHHHHHHHTTTC
T ss_pred HHHHcCCCEEEEcCChHHHHHHHHHHHcCC
Confidence 344444333333333333444444444333
No 166
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=24.81 E-value=1.9e+02 Score=25.47 Aligned_cols=55 Identities=18% Similarity=0.237 Sum_probs=34.1
Q ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 014435 45 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~i~~~l~~~~~~~ii~~ 103 (424)
++++||.|.+..+.... ...++...|+.++.++.+ ...+++...++. ++++|+..
T Consensus 76 ~~~~g~~Vi~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 135 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWST---TYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTV 135 (390)
T ss_dssp SCCTTCEEEEESSSCHH---HHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCcCEEEECCCCcHH---HHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEE
Confidence 57889988776655333 333555678776655432 356777777754 56666653
No 167
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=24.75 E-value=3.5e+02 Score=23.54 Aligned_cols=18 Identities=17% Similarity=0.141 Sum_probs=9.6
Q ss_pred CHHHHHHHHHhcCCeEEE
Q 014435 84 TVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 84 ~~~~i~~~l~~~~~~~ii 101 (424)
..+++...++..++++++
T Consensus 159 d~~~l~~~i~~~~~~~v~ 176 (397)
T 3f9t_A 159 DEKFVKDAVEDYDVDGII 176 (397)
T ss_dssp CHHHHHHHHHHSCCCEEE
T ss_pred CHHHHHHHHhhcCCeEEE
Confidence 556666666653444443
No 168
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=24.61 E-value=80 Score=23.62 Aligned_cols=46 Identities=7% Similarity=-0.099 Sum_probs=27.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe-EecCC
Q 014435 35 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI-ASTAN 80 (424)
Q Consensus 35 ~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~-~v~l~ 80 (424)
.++...|.+.|+.++..|.++|..+.....+...+...|.. +..++
T Consensus 66 ~~l~~~l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~ 112 (148)
T 2fsx_A 66 AELRDRIPADADQHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVL 112 (148)
T ss_dssp HHHHHHCC-------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEET
T ss_pred HHHHHHHhhccCCCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEc
Confidence 34444455567788888999999888887777778888863 33443
No 169
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=24.47 E-value=1.2e+02 Score=26.28 Aligned_cols=83 Identities=13% Similarity=0.052 Sum_probs=49.8
Q ss_pred CCCCCCCCCCcHHHHHHHHHHH--H----HHHHHcCCCCCC-EEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVIKV--S----HSFRHLGITKKD-VVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVSE 87 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~~~--a----~~L~~~gi~~g~-~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 87 (424)
......|+.+++.+....-... | ..+.+.++++|+ +|++... ...-..++.+|- ..|+.++.+..... .
T Consensus 111 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~-~~Ga~vi~~~~~~~--~ 187 (330)
T 1tt7_A 111 DWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLN-KRGYDVVASTGNRE--A 187 (330)
T ss_dssp GGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHH-HHTCCEEEEESSSS--T
T ss_pred HHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHH--H
Confidence 4455678889998765432211 1 223455889996 9999987 556666666665 46876655544322 2
Q ss_pred HHHHHHhcCCeEEEE
Q 014435 88 LSKQVKDSNPKLVIT 102 (424)
Q Consensus 88 i~~~l~~~~~~~ii~ 102 (424)
...+++.+++.++.
T Consensus 188 -~~~~~~lGa~~v~~ 201 (330)
T 1tt7_A 188 -ADYLKQLGASEVIS 201 (330)
T ss_dssp -HHHHHHHTCSEEEE
T ss_pred -HHHHHHcCCcEEEE
Confidence 23345567776663
No 170
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=24.35 E-value=1.4e+02 Score=25.17 Aligned_cols=41 Identities=12% Similarity=0.357 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCcc-HHHHHHHHHHhCC
Q 014435 34 VIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGA 74 (424)
Q Consensus 34 ~~~~a~~L~~~gi~~g~~V~l~~~~~~~-~~~~~lA~~~~G~ 74 (424)
...++..+.+.|+.+++.|.+++..+.. ...+.+.+...|.
T Consensus 71 ~~~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~ 112 (280)
T 1urh_A 71 PETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGV 112 (280)
T ss_dssp HHHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCC
Confidence 3566777888899999999999988766 5666666677775
No 171
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=24.15 E-value=1.9e+02 Score=25.19 Aligned_cols=50 Identities=26% Similarity=0.300 Sum_probs=23.7
Q ss_pred CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 014435 47 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 47 ~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~ 102 (424)
++||.|.+..|....+ ..++...|+.++.++ .+.+++...++. ++++++.
T Consensus 111 ~~gd~vl~~~p~~~~~---~~~~~~~g~~~~~v~--~d~~~l~~~l~~-~~~~v~~ 160 (370)
T 2z61_A 111 DDGDEVLIQNPCYPCY---KNFIRFLGAKPVFCD--FTVESLEEALSD-KTKAIII 160 (370)
T ss_dssp CTTCEEEEESSCCTHH---HHHHHHTTCEEEEEC--SSHHHHHHHCCS-SEEEEEE
T ss_pred CCCCEEEEeCCCchhH---HHHHHHcCCEEEEeC--CCHHHHHHhccc-CceEEEE
Confidence 4566555554443322 223344566655554 455555555543 3444433
No 172
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=24.08 E-value=1.1e+02 Score=27.39 Aligned_cols=56 Identities=20% Similarity=0.261 Sum_probs=27.1
Q ss_pred HcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHHHhcCCeEEEE
Q 014435 43 HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 43 ~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~i~~~l~~~~~~~ii~ 102 (424)
..++++||.|.+..+....+. .++...|+.++.++.. ...+++...++. ++++|+.
T Consensus 76 ~~~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 136 (418)
T 2c81_A 76 ALGIGEGDEVIVPSLTWIATA---TAVLNVNALPVFVDVEADTYCIDPQLIKSAITD-KTKAIIP 136 (418)
T ss_dssp HTTCCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT-TEEEECC
T ss_pred HcCCCCcCEEEECCCccHhHH---HHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEE
Confidence 334566776666555433332 3344566655544332 244555544432 3455544
No 173
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=23.98 E-value=2.6e+02 Score=21.75 Aligned_cols=79 Identities=13% Similarity=0.101 Sum_probs=40.4
Q ss_pred CCCCCCCcHHHHHHHHHH--HHH-HHHH-cCCCCCCEEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHH
Q 014435 19 LVLPSDPSFSMFKSIVIK--VSH-SFRH-LGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVK 93 (424)
Q Consensus 19 ~~~~~~~Ty~el~~~~~~--~a~-~L~~-~gi~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~ 93 (424)
...|+.+++.+....... .|. .|.+ .++++|++|.+... .++-..++.++. ..|+.++.++. +++.+. .++
T Consensus 5 ~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~-~~G~~V~~~~~--~~~~~~-~~~ 80 (198)
T 1pqw_A 5 VPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAG--SDAKRE-MLS 80 (198)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHH-HHTCEEEEEES--SHHHHH-HHH
T ss_pred eECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-HHH
Confidence 446777888876654332 232 2333 47999999999885 456666665554 56887766553 333333 345
Q ss_pred hcCCeEEE
Q 014435 94 DSNPKLVI 101 (424)
Q Consensus 94 ~~~~~~ii 101 (424)
..+++.++
T Consensus 81 ~~g~~~~~ 88 (198)
T 1pqw_A 81 RLGVEYVG 88 (198)
T ss_dssp TTCCSEEE
T ss_pred HcCCCEEe
Confidence 55655544
No 174
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=23.79 E-value=2.4e+02 Score=21.43 Aligned_cols=42 Identities=5% Similarity=-0.063 Sum_probs=35.1
Q ss_pred HHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 014435 63 PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 63 ~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
.++...+-..|.-++-+....+++++...+.+.++++|..+.
T Consensus 36 ~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~ 77 (161)
T 2yxb_A 36 KVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSI 77 (161)
T ss_dssp HHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 344445556899999999999999999999999999998874
No 175
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=23.71 E-value=1.4e+02 Score=26.14 Aligned_cols=12 Identities=0% Similarity=-0.288 Sum_probs=5.4
Q ss_pred HHhcCCeEEEEc
Q 014435 92 VKDSNPKLVITV 103 (424)
Q Consensus 92 l~~~~~~~ii~~ 103 (424)
.+..+.+++.+.
T Consensus 122 ~~~~g~~~~~v~ 133 (390)
T 1elu_A 122 AARFGITYRFFP 133 (390)
T ss_dssp HHHHCCEEEEEC
T ss_pred HHHhCcEEEEEc
Confidence 344444444443
No 176
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=23.69 E-value=2.8e+02 Score=23.13 Aligned_cols=82 Identities=11% Similarity=-0.012 Sum_probs=58.1
Q ss_pred CCCcHHHHHHHHHHHHHHHHHc--CC----CCCCEEEEECCCC----ccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHH
Q 014435 23 SDPSFSMFKSIVIKVSHSFRHL--GI----TKKDVVLIFAPNS----IHFPICFLGVIAIGAIASTANPVYTVSELSKQV 92 (424)
Q Consensus 23 ~~~Ty~el~~~~~~~a~~L~~~--gi----~~g~~V~l~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l 92 (424)
..++..|++..+..+-..+... -+ ..+-+|.+..+.+ +...++...+-..|..++-+.+..+++++...+
T Consensus 91 g~~~v~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~ 170 (258)
T 2i2x_B 91 GVIFLPNVMMSADAMLEGIEYCKENSGATPKTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAV 170 (258)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHTTTSSCCCCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 3578888888777777666421 11 2334666665543 334455555667899999888889999999999
Q ss_pred HhcCCeEEEEcc
Q 014435 93 KDSNPKLVITVP 104 (424)
Q Consensus 93 ~~~~~~~ii~~~ 104 (424)
++.++++|..+.
T Consensus 171 ~~~~~d~V~lS~ 182 (258)
T 2i2x_B 171 QKEKPIMLTGTA 182 (258)
T ss_dssp HHHCCSEEEEEC
T ss_pred HHcCCCEEEEEe
Confidence 999999999874
No 177
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=23.66 E-value=2.4e+02 Score=21.41 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHh---cCCeEEEEccc
Q 014435 33 IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKD---SNPKLVITVPE 105 (424)
Q Consensus 33 ~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~---~~~~~ii~~~~ 105 (424)
+...+...|.+. ++..+.|+++.....-.+.-.+...|..+..+....+..+...+++. -+.+++++++.
T Consensus 21 K~~~L~~ll~~~---~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~R~~~~~~f~~g~~~vLvaT~~ 93 (175)
T 2rb4_A 21 KYQALCNIYGSI---TIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNV 93 (175)
T ss_dssp HHHHHHHHHTTS---CCSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHTTSCSEEEECCS
T ss_pred HHHHHHHHHHhC---CCCCEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHHHcCCCeEEEEecc
Confidence 445555555543 45578898887655555555556678888899999988776666655 45677777643
No 178
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=23.66 E-value=2.6e+02 Score=24.40 Aligned_cols=53 Identities=19% Similarity=0.156 Sum_probs=29.9
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC-------CCHHHHHHHHHhcCCeEEEE
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-------YTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~i~~~l~~~~~~~ii~ 102 (424)
+++||.|.+..|.-.. ...++...|+.++.++.. ...+++...+ ..++++++.
T Consensus 103 ~~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~i 162 (383)
T 3kax_A 103 TKENESVLVQPPIYPP---FFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF-QQGVKLMLL 162 (383)
T ss_dssp CCTTCEEEECSSCCHH---HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHH-TTTCCEEEE
T ss_pred CCCCCEEEEcCCCcHH---HHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHh-CcCCeEEEE
Confidence 4567776655543322 234455667776666542 4667777776 345555544
No 179
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=23.51 E-value=2.4e+02 Score=25.44 Aligned_cols=24 Identities=8% Similarity=0.043 Sum_probs=11.5
Q ss_pred HHHHHHHHhCCCCeEEecccCccC
Q 014435 294 ELMEDCQKNIPGATIFQGYGMTET 317 (424)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~yG~tE~ 317 (424)
+..+++.+.+.-..+....|..|+
T Consensus 342 ~~~~~~~~~l~~~~~~~s~G~~~s 365 (414)
T 3ndn_A 342 QRAFEVLDKMRLIDISNNLGDAKS 365 (414)
T ss_dssp HHHHHHHHHCSSSEECSCCSCSSC
T ss_pred HHHHHHHHhCccceEcCCCCCCCc
Confidence 334455555433344445565553
No 180
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=23.41 E-value=1.9e+02 Score=25.31 Aligned_cols=51 Identities=18% Similarity=0.109 Sum_probs=24.1
Q ss_pred CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC--------CCHHHHHHHHHhcCCeEEEE
Q 014435 47 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV--------YTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 47 ~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~--------~~~~~i~~~l~~~~~~~ii~ 102 (424)
++||.|.+..|.-.. ...++...|+.++.++.. ...+++...++. +++++.
T Consensus 112 ~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i 170 (391)
T 4dq6_A 112 KANDKIMIQEPVYSP---FNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFIL 170 (391)
T ss_dssp CTTCEEEECSSCCTH---HHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEE
T ss_pred CCCCEEEEcCCCCHH---HHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEE
Confidence 456655544433222 222344556655554433 355666666555 444433
No 181
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=23.26 E-value=1.9e+02 Score=25.10 Aligned_cols=55 Identities=9% Similarity=0.121 Sum_probs=36.3
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCC--C--CCCHHHHHHHHHhcCCeEEEEc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN--P--VYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~--~--~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
+++||.|.+..|.-..+.. ++...|+.++.++ + ....+++...++..++++|+..
T Consensus 106 ~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 106 ARPGAKVMAPVPGFVMYAM---SAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp CCTTCEEEEEESCSCCSCH---HHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcCCCHHHHHH---HHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEc
Confidence 4688888877665544332 3456677666544 3 3477888888887677777764
No 182
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=23.14 E-value=1.1e+02 Score=27.12 Aligned_cols=56 Identities=13% Similarity=0.014 Sum_probs=39.8
Q ss_pred CEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 50 DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 50 ~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
+.|... ..+=.-..+.++|.+.|..++.+=|...+..-...++..++++++++...
T Consensus 77 ~~vv~~-SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~ 132 (346)
T 3l6b_A 77 KAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSD 132 (346)
T ss_dssp SCEEEE-CSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEe-CCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 344333 34556677778899999877766555555566788899999999998654
No 183
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=22.97 E-value=1.8e+02 Score=25.73 Aligned_cols=83 Identities=14% Similarity=0.038 Sum_probs=52.0
Q ss_pred CCCCCCCCCCcHHHHHHHHH--HHHH-HHH-HcC----CCCCCEEEEECC-CCccHHHHHHHHHHhCCeEecCCCCCCHH
Q 014435 16 RPPLVLPSDPSFSMFKSIVI--KVSH-SFR-HLG----ITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVS 86 (424)
Q Consensus 16 ~~~~~~~~~~Ty~el~~~~~--~~a~-~L~-~~g----i~~g~~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 86 (424)
......|+.+++.+...... ..|. .|. ..+ +++|++|+|... -++-..++.+|- ..|+.++... +.+
T Consensus 143 ~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~-~~Ga~Vi~~~---~~~ 218 (375)
T 2vn8_A 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMK-AWDAHVTAVC---SQD 218 (375)
T ss_dssp GGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEE---CGG
T ss_pred HHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEe---ChH
Confidence 34456788899987543322 2222 232 346 899999999984 567777777665 4688766553 223
Q ss_pred HHHHHHHhcCCeEEEEc
Q 014435 87 ELSKQVKDSNPKLVITV 103 (424)
Q Consensus 87 ~i~~~l~~~~~~~ii~~ 103 (424)
. ...+++.+++.++..
T Consensus 219 ~-~~~~~~lGa~~v~~~ 234 (375)
T 2vn8_A 219 A-SELVRKLGADDVIDY 234 (375)
T ss_dssp G-HHHHHHTTCSEEEET
T ss_pred H-HHHHHHcCCCEEEEC
Confidence 3 344578888877753
No 184
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=22.89 E-value=2.2e+02 Score=24.98 Aligned_cols=20 Identities=15% Similarity=0.463 Sum_probs=9.1
Q ss_pred CCHHHHHHHHHhcCCeEEEE
Q 014435 83 YTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 83 ~~~~~i~~~l~~~~~~~ii~ 102 (424)
...+++...++..++++|+.
T Consensus 130 ~d~~~l~~~l~~~~~~~v~~ 149 (396)
T 2ch1_A 130 FSLETLARAIELHQPKCLFL 149 (396)
T ss_dssp CCHHHHHHHHHHHCCSEEEE
T ss_pred CCHHHHHHHHHhCCCCEEEE
Confidence 34455555554433444443
No 185
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=22.81 E-value=2.3e+02 Score=24.64 Aligned_cols=58 Identities=16% Similarity=0.116 Sum_probs=30.5
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC----CCHHHHHHHHHhcCCeEEEEcc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITVP 104 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~i~~~l~~~~~~~ii~~~ 104 (424)
+++||.|.+..+...- ....-.+...|+.++.++.. ...+++...++..++++++...
T Consensus 74 ~~~gd~vi~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 135 (384)
T 3zrp_A 74 LKPNDKILVVSNGVFG-DRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTH 135 (384)
T ss_dssp CCTTCEEEEECSSHHH-HHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEES
T ss_pred cCCCCEEEEecCCcch-HHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 4567766665442111 11112223456665554432 4677777777765666666653
No 186
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=22.57 E-value=2.2e+02 Score=22.07 Aligned_cols=75 Identities=8% Similarity=0.011 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHH---HHHHhcCCeEEEEcccchH
Q 014435 32 SIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELS---KQVKDSNPKLVITVPELWD 108 (424)
Q Consensus 32 ~~~~~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~---~~l~~~~~~~ii~~~~~~~ 108 (424)
++...+...|.+.+ ++..+.|+++.....-.+.-.+-..|..+..+....+..+.. ...+.-+.+++|+++-...
T Consensus 31 ~K~~~L~~ll~~~~--~~~k~lVF~~~~~~~~~l~~~L~~~g~~~~~lhg~~~~~~r~~~~~~f~~g~~~vLvaT~~~~~ 108 (185)
T 2jgn_A 31 DKRSFLLDLLNATG--KDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAAR 108 (185)
T ss_dssp GHHHHHHHHHHHC---CCSCEEEEESCHHHHHHHHHHHHHTTCCEEEEC--------CHHHHHHHHTSSSEEEEEC----
T ss_pred HHHHHHHHHHHhcC--CCCeEEEEECCHHHHHHHHHHHHHcCCceEEEeCCCCHHHHHHHHHHHHcCCCeEEEEcChhhc
Confidence 34455666666643 566788888876554444444556788888888877665543 3445567788888754433
No 187
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=22.49 E-value=2.9e+02 Score=23.88 Aligned_cols=61 Identities=13% Similarity=0.017 Sum_probs=39.3
Q ss_pred CCCCCCEEEEECCCCcc-HHHHHHHHH---HhCCeEecCCCC------------CCHHHHHHHHHhcCCeEEEEccc
Q 014435 45 GITKKDVVLIFAPNSIH-FPICFLGVI---AIGAIASTANPV------------YTVSELSKQVKDSNPKLVITVPE 105 (424)
Q Consensus 45 gi~~g~~V~l~~~~~~~-~~~~~lA~~---~~G~~~v~l~~~------------~~~~~i~~~l~~~~~~~ii~~~~ 105 (424)
-+++||+|++++|.+.- .-....|+. ..|..++.-+.. ...+++...+++-++++|++...
T Consensus 13 ~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 89 (311)
T 1zl0_A 13 WQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRG 89 (311)
T ss_dssp CCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCC
T ss_pred cCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccC
Confidence 47899999999998742 221222222 348777743321 12456777888889999999863
No 188
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=22.37 E-value=2.8e+02 Score=24.11 Aligned_cols=54 Identities=9% Similarity=0.070 Sum_probs=29.1
Q ss_pred CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC----CCCHHHHHHHHHhcCCeEEEEc
Q 014435 47 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP----VYTVSELSKQVKDSNPKLVITV 103 (424)
Q Consensus 47 ~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~----~~~~~~i~~~l~~~~~~~ii~~ 103 (424)
++||.|.+..|.-..+ ..++...|+.++.++. ....+++...++..+++++++.
T Consensus 114 ~~gd~Vl~~~~~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 171 (369)
T 3cq5_A 114 GPGRTALGFQPSYSMH---PILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVT 171 (369)
T ss_dssp STTCEEEEEESSCTHH---HHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEE
T ss_pred CCCCEEEEcCCChHHH---HHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEe
Confidence 4667666665543332 2244556666554432 2356667666665456666553
No 189
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=22.35 E-value=2.9e+02 Score=24.50 Aligned_cols=55 Identities=5% Similarity=0.059 Sum_probs=34.3
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHHHhc---CCe-EEEEc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-----VYTVSELSKQVKDS---NPK-LVITV 103 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~i~~~l~~~---~~~-~ii~~ 103 (424)
+++||.|.+..|.-..+. .++...|+.++.++. ....+.+...++.. +.+ +++++
T Consensus 122 ~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~ 185 (413)
T 3t18_A 122 LDEGDPLICHDYYWAPYR---KICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLIN 185 (413)
T ss_dssp CCSSCEEEEESSCCTHHH---HHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCCEEEECCCCcccHH---HHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 468888888776443332 344567777766653 45678888888763 555 44443
No 190
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=22.32 E-value=2.1e+02 Score=25.20 Aligned_cols=19 Identities=32% Similarity=0.406 Sum_probs=8.9
Q ss_pred CCHHHHHHHHHhcCCeEEE
Q 014435 83 YTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 83 ~~~~~i~~~l~~~~~~~ii 101 (424)
...+.+...+++.++++|+
T Consensus 151 ~d~~~l~~~l~~~~~~~v~ 169 (399)
T 1c7n_A 151 IDFQKLEKLSKDKNNKALL 169 (399)
T ss_dssp CCHHHHHHHHTCTTEEEEE
T ss_pred EcHHHHHHHhccCCCcEEE
Confidence 3455555555433444444
No 191
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=22.27 E-value=3.5e+02 Score=22.76 Aligned_cols=78 Identities=6% Similarity=-0.091 Sum_probs=49.0
Q ss_pred CCCcHHHH-HHHHHHHHHHHHHcC-CCCCCEEEEECCCCccHHHHHHHHHHhC-------------CeEecCC--CCCCH
Q 014435 23 SDPSFSMF-KSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIG-------------AIASTAN--PVYTV 85 (424)
Q Consensus 23 ~~~Ty~el-~~~~~~~a~~L~~~g-i~~g~~V~l~~~~~~~~~~~~lA~~~~G-------------~~~v~l~--~~~~~ 85 (424)
..|++.+. .+.+..+..++++.| . ..|.+-+.-+.|..++..-|.+++ ...+.++ +....
T Consensus 15 ~~~~~~~~i~~~~~~L~~~l~~~g~~---~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~~~~~~ 91 (275)
T 1wxi_A 15 PQINAEEEIRRSVDFLKSYLQTYPFI---KSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADE 91 (275)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHSTTC---CEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSCTTH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCC---CCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCCCccCH
Confidence 34666654 445566666666655 3 358888888999977765555542 3334443 23356
Q ss_pred HHHHHHHHhcCC-eEEEEc
Q 014435 86 SELSKQVKDSNP-KLVITV 103 (424)
Q Consensus 86 ~~i~~~l~~~~~-~~ii~~ 103 (424)
++...+.+..++ .+.+.+
T Consensus 92 ~dA~~va~~lgi~~~~~i~ 110 (275)
T 1wxi_A 92 QDCQDAIAFIQPDRVLTVN 110 (275)
T ss_dssp HHHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHHcCCCeEEEEe
Confidence 677788888887 666654
No 192
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=22.21 E-value=1.9e+02 Score=25.49 Aligned_cols=55 Identities=15% Similarity=0.201 Sum_probs=30.3
Q ss_pred HcCCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHHHhcCCeEEE
Q 014435 43 HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-----VYTVSELSKQVKDSNPKLVI 101 (424)
Q Consensus 43 ~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~i~~~l~~~~~~~ii 101 (424)
..++++||.|.+..+....+. .++...|+.++.++. ....+++...++. +.++|+
T Consensus 72 ~l~~~~gd~Vi~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~ 131 (388)
T 1b9h_A 72 VMGVGPGTEVIVPAFTFISSS---QAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP-RTKVIM 131 (388)
T ss_dssp HTTCCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEEC
T ss_pred HcCCCCcCEEEECCCccHHHH---HHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEE
Confidence 334677887777665544332 344566766655443 2356666666542 445554
No 193
>3if4_A Integron cassette protein HFX_CASS5; integron cassette protein mobIle metagenome structural genomics PSI-2 protein structure initiative midwest center for structural genomics; HET: MSE; 2.18A {Unidentified}
Probab=22.03 E-value=1.1e+02 Score=21.19 Aligned_cols=20 Identities=10% Similarity=0.318 Sum_probs=17.4
Q ss_pred CCCCCcHHHHHHHHHHHHHH
Q 014435 21 LPSDPSFSMFKSIVIKVSHS 40 (424)
Q Consensus 21 ~~~~~Ty~el~~~~~~~a~~ 40 (424)
.||.|||.|-.+..-+.|..
T Consensus 70 ~PREWsy~~W~~qI~~aA~~ 89 (119)
T 3if4_A 70 VPREWSYAQWLQQIFAAASE 89 (119)
T ss_dssp CCCCCCHHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHh
Confidence 56889999999999888876
No 194
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=21.84 E-value=1.9e+02 Score=26.36 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=33.5
Q ss_pred CCCCCEEEEECCCCccHHHHHH---------HHHHhCCeEecCCCC----CCHHHHHHHHHh-cCCeEEEEcc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFL---------GVIAIGAIASTANPV----YTVSELSKQVKD-SNPKLVITVP 104 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~l---------A~~~~G~~~v~l~~~----~~~~~i~~~l~~-~~~~~ii~~~ 104 (424)
+++||.|.+...+.+.....++ .+...|+.+..++.. ...+++...+++ -++++|++..
T Consensus 112 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~ 184 (427)
T 3i16_A 112 LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQR 184 (427)
T ss_dssp CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEEC
T ss_pred hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEc
Confidence 5677776655413333333222 233457776666552 566777777764 4667777655
No 195
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=21.83 E-value=1.8e+02 Score=26.03 Aligned_cols=79 Identities=11% Similarity=0.155 Sum_probs=46.9
Q ss_pred CCCCCCCCcHHH----HHHHHH--HHH-HHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCC-eEecCCCCCCHHHHH
Q 014435 18 PLVLPSDPSFSM----FKSIVI--KVS-HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA-IASTANPVYTVSELS 89 (424)
Q Consensus 18 ~~~~~~~~Ty~e----l~~~~~--~~a-~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~i~ 89 (424)
....|+.+++.+ ...... ..| +.|...++++|++|+|...-..-.+++++|-. .|+ .++.++. +++. .
T Consensus 148 ~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~-~Ga~~Vi~~~~--~~~~-~ 223 (398)
T 1kol_A 148 LLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARL-LGAAVVIVGDL--NPAR-L 223 (398)
T ss_dssp CEECSCHHHHHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEES--CHHH-H
T ss_pred EEECCCCcchhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHH-CCCCeEEEEcC--CHHH-H
Confidence 445666677766 211111 111 23445689999999999865566677666654 687 4555543 3344 3
Q ss_pred HHHHhcCCeEE
Q 014435 90 KQVKDSNPKLV 100 (424)
Q Consensus 90 ~~l~~~~~~~i 100 (424)
.++++.+++++
T Consensus 224 ~~a~~lGa~~i 234 (398)
T 1kol_A 224 AHAKAQGFEIA 234 (398)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHcCCcEE
Confidence 45578888743
No 196
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=21.71 E-value=1.1e+02 Score=26.66 Aligned_cols=33 Identities=6% Similarity=-0.102 Sum_probs=16.1
Q ss_pred HhCCeEecCCCCCCHH-HHHHHHHhcCCeEEEEc
Q 014435 71 AIGAIASTANPVYTVS-ELSKQVKDSNPKLVITV 103 (424)
Q Consensus 71 ~~G~~~v~l~~~~~~~-~i~~~l~~~~~~~ii~~ 103 (424)
.-|-.++..++.++.- .....++..+.+++.++
T Consensus 86 ~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~ 119 (382)
T 4hvk_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIP 119 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEec
Confidence 4555555444444332 22334455566666665
No 197
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=21.69 E-value=1.9e+02 Score=25.17 Aligned_cols=80 Identities=8% Similarity=-0.041 Sum_probs=48.7
Q ss_pred CCCCCCCCcHHHHHHHHHH--H-HHHHHHc-----CCCCCCEEEEECCCCccHHHHHHHHHHh-CCeEecCCCCCCHHHH
Q 014435 18 PLVLPSDPSFSMFKSIVIK--V-SHSFRHL-----GITKKDVVLIFAPNSIHFPICFLGVIAI-GAIASTANPVYTVSEL 88 (424)
Q Consensus 18 ~~~~~~~~Ty~el~~~~~~--~-a~~L~~~-----gi~~g~~V~l~~~~~~~~~~~~lA~~~~-G~~~v~l~~~~~~~~i 88 (424)
.... +.+++.+....... . -+.|... ++ +|++|+|....+.-.+++++|-... |+.++.+.. +++.+
T Consensus 134 ~~~i-~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~--~~~~~ 209 (344)
T 2h6e_A 134 LVKL-NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISR--SKKHR 209 (344)
T ss_dssp EEEE-SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS--CHHHH
T ss_pred EEEe-CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC--CHHHH
Confidence 3445 66888765321111 1 1224444 78 9999999998667777777776542 887665553 34443
Q ss_pred HHHHHhcCCeEEEE
Q 014435 89 SKQVKDSNPKLVIT 102 (424)
Q Consensus 89 ~~~l~~~~~~~ii~ 102 (424)
.++++.+++.++.
T Consensus 210 -~~~~~lGa~~vi~ 222 (344)
T 2h6e_A 210 -DFALELGADYVSE 222 (344)
T ss_dssp -HHHHHHTCSEEEC
T ss_pred -HHHHHhCCCEEec
Confidence 4456678877663
No 198
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=21.53 E-value=1.5e+02 Score=24.81 Aligned_cols=42 Identities=14% Similarity=0.114 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCc-cHHHHHHHHHHhCCe
Q 014435 34 VIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAI 75 (424)
Q Consensus 34 ~~~~a~~L~~~gi~~g~~V~l~~~~~~-~~~~~~lA~~~~G~~ 75 (424)
...++..+.+.|+.+++.|.+++..+. ....+...+...|..
T Consensus 66 ~~~~~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~ 108 (271)
T 1e0c_A 66 REQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQ 108 (271)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCCCccHHHHHHHHHHcCCC
Confidence 346677777889999999999998776 566666666677763
No 199
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=21.49 E-value=73 Score=27.42 Aligned_cols=78 Identities=12% Similarity=0.111 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC--CCCHHH---HHHHHHhcCCeEE
Q 014435 28 SMFKSIVIKVSHSFRHL--GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--VYTVSE---LSKQVKDSNPKLV 100 (424)
Q Consensus 28 ~el~~~~~~~a~~L~~~--gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---i~~~l~~~~~~~i 100 (424)
.++.++.+++-..+++. .++.+.+..+...+.+.++.-.|++-..+.. -+++ .-++.+ +...+++.++++|
T Consensus 159 ~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~i 236 (294)
T 3hh8_A 159 KAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYIW--EINTEEEGTPDQISSLIEKLKVIKPSAL 236 (294)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCCEEEEE--SSCCSCCCCHHHHHHHHHHHHHSCCSCE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCceeecc--ccCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 33444444444444442 3433335566667789998888887654422 2333 234554 4566677799999
Q ss_pred EEcccch
Q 014435 101 ITVPELW 107 (424)
Q Consensus 101 i~~~~~~ 107 (424)
|+++...
T Consensus 237 f~e~~~~ 243 (294)
T 3hh8_A 237 FVESSVD 243 (294)
T ss_dssp EEETTSC
T ss_pred EEeCCCC
Confidence 9987544
No 200
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=21.40 E-value=1e+02 Score=27.14 Aligned_cols=33 Identities=6% Similarity=-0.102 Sum_probs=16.5
Q ss_pred HhCCeEecCCCCCCHH-HHHHHHHhcCCeEEEEc
Q 014435 71 AIGAIASTANPVYTVS-ELSKQVKDSNPKLVITV 103 (424)
Q Consensus 71 ~~G~~~v~l~~~~~~~-~i~~~l~~~~~~~ii~~ 103 (424)
.-|-.++..++.++.- .....++..+.+++.++
T Consensus 86 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~ 119 (382)
T 4eb5_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIP 119 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEEC
T ss_pred CCCCEEEECCCcchHHHHHHHHHHhCCcEEEEec
Confidence 3455555555555322 22333445666766665
No 201
>2kke_A Uncharacterized protein; protein northeast structural genomics consortium (NESG), target TR5, PSI-2; NMR {Methanothermobacter thermautotrophicusstr}
Probab=21.36 E-value=1.1e+02 Score=17.22 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=19.8
Q ss_pred cCCce-eeEeeeeeeChhhHHHHHhcCCC
Q 014435 389 SNDHN-DFFCKLFQVAPAELEGLLVSHPE 416 (424)
Q Consensus 389 ~~g~~-di~~~G~~v~~~~iE~~l~~~p~ 416 (424)
++|.+ |.+---.+.+|.|||..-.+.|.
T Consensus 6 pggglkdtkpvvvrlypdeiealksrvpa 34 (53)
T 2kke_A 6 PGGGLKDTKPVVVRLYPDEIEALKSRVPA 34 (53)
T ss_dssp CSSTTTSSEEEEEEECHHHHHHHHTTCCS
T ss_pred CCCCcccCCceEEEeChhHHHHHHhcCCC
Confidence 44444 55555568999999998777775
No 202
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=21.34 E-value=1.3e+02 Score=26.83 Aligned_cols=53 Identities=11% Similarity=0.048 Sum_probs=38.9
Q ss_pred EECCCCccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 014435 54 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 106 (424)
Q Consensus 54 l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~ 106 (424)
+....+=.-..+.++|.+.|..++.+=|...+......++..++++++++..+
T Consensus 97 v~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~ 149 (364)
T 4h27_A 97 VCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGELL 149 (364)
T ss_dssp EECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSST
T ss_pred EEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 33444666677778888999887766565555666788899999999998643
No 203
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=21.29 E-value=2.5e+02 Score=24.75 Aligned_cols=12 Identities=17% Similarity=0.030 Sum_probs=6.2
Q ss_pred hhhhcHHHHHHH
Q 014435 179 GVILTHKNFIAA 190 (424)
Q Consensus 179 ~v~~t~~~~~~~ 190 (424)
+..+....+...
T Consensus 209 g~~~~~~~~~~~ 220 (411)
T 3nnk_A 209 SPITLSARMEEA 220 (411)
T ss_dssp EEEEECHHHHHH
T ss_pred EEEEECHHHHHH
Confidence 455555555443
No 204
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=21.04 E-value=2.2e+02 Score=25.90 Aligned_cols=59 Identities=8% Similarity=0.104 Sum_probs=36.4
Q ss_pred CCCCCEEEEECCCCccHHHHHH---------HHHHhCCeEecCCC---CCCHHHHHHHHHh-cCCeEEEEcc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFL---------GVIAIGAIASTANP---VYTVSELSKQVKD-SNPKLVITVP 104 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~l---------A~~~~G~~~v~l~~---~~~~~~i~~~l~~-~~~~~ii~~~ 104 (424)
+++||.|.+...+.+.....++ .+...|+.+..++. ....+++...+++ -++++|+++.
T Consensus 113 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~ 184 (427)
T 3hvy_A 113 LRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQR 184 (427)
T ss_dssp CCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEES
T ss_pred cCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEEC
Confidence 6788877666523443333333 23346877776654 2567788887775 5778887766
No 205
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=20.91 E-value=1.5e+02 Score=24.75 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=33.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCccHHHHHHHHHHhCCe
Q 014435 36 KVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 75 (424)
Q Consensus 36 ~~a~~L~~~gi~~g~~V~l~~~~~~~~~~~~lA~~~~G~~ 75 (424)
.+...+.+.++.+++.|.++|..+.....+.+.+..+|..
T Consensus 210 ~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~ 249 (271)
T 1e0c_A 210 DIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYP 249 (271)
T ss_dssp THHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCC
Confidence 4455566778999999999999999888888888888874
No 206
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=20.76 E-value=2.2e+02 Score=28.13 Aligned_cols=56 Identities=18% Similarity=0.129 Sum_probs=38.3
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCCC---------C-----CHHHHHHHHHhc-CCe----EEEEcc
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV---------Y-----TVSELSKQVKDS-NPK----LVITVP 104 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~-----~~~~i~~~l~~~-~~~----~ii~~~ 104 (424)
+++||.|.+--++..- ..-++...|+.++.+++. . +.+.++..++.. +.+ ++++++
T Consensus 232 ~~pGD~VLv~r~~H~S---~~~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p 306 (715)
T 3n75_A 232 APAGSTILIDRNCHKS---LTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS 306 (715)
T ss_dssp CCTTCEEEEESSCCHH---HHHHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS
T ss_pred CCCCCEEEECCCccHH---HHHHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC
Confidence 6899988776554433 234688899999888763 1 578899888764 333 566654
No 207
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=20.66 E-value=47 Score=27.21 Aligned_cols=37 Identities=14% Similarity=0.241 Sum_probs=27.4
Q ss_pred EEecCCce--eeEeeeeeeChhhHHHHHhcCCCcccceec
Q 014435 386 YFRSNDHN--DFFCKLFQVAPAELEGLLVSHPEILDAVVI 423 (424)
Q Consensus 386 ~~~~~g~~--di~~~G~~v~~~~iE~~l~~~p~V~~a~v~ 423 (424)
++.++|.+ |+.. +.--+|.++|..|.+.|+|.|.=.|
T Consensus 160 ~vTdnGn~IlD~~~-~~i~~p~~l~~~l~~i~GVve~GlF 198 (219)
T 1o8b_A 160 VVTDNGNVILDVHG-MEILDPIAMENAINAIPGVVTVGLF 198 (219)
T ss_dssp CCCTTSCEEEEEES-CCBSCHHHHHHHHHTSTTEEEESEE
T ss_pred eEeCCCCEEEEeeC-CCCCCHHHHHHHHhcCCCcceeeeE
Confidence 56677765 7544 3445899999999999999875443
No 208
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=20.59 E-value=1.3e+02 Score=22.40 Aligned_cols=31 Identities=19% Similarity=-0.001 Sum_probs=15.2
Q ss_pred HHHHhCCeEecCCCCCCHHHHHHHHHhcCCe
Q 014435 68 GVIAIGAIASTANPVYTVSELSKQVKDSNPK 98 (424)
Q Consensus 68 A~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~ 98 (424)
.|...|+..+.+.+....+++...+++.+..
T Consensus 96 ~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 96 QAIKKGAKVVWFQYNTYNREASKKADEAGLI 126 (144)
T ss_dssp HHHHHTCSEEEECTTCCCHHHHHHHHHTTCE
T ss_pred HHHHcCCCEEEECCCchHHHHHHHHHHcCCE
Confidence 4445554444444444445555555555544
No 209
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=20.54 E-value=2.2e+02 Score=24.86 Aligned_cols=13 Identities=8% Similarity=-0.118 Sum_probs=6.6
Q ss_pred chhhhcHHHHHHH
Q 014435 178 KGVILTHKNFIAA 190 (424)
Q Consensus 178 K~v~~t~~~~~~~ 190 (424)
-+..+....+...
T Consensus 218 ~g~~~~~~~~~~~ 230 (393)
T 3kgw_A 218 ISLISFNDKAKYK 230 (393)
T ss_dssp CEEEEECHHHHHH
T ss_pred eeEEEECHHHHHH
Confidence 4555555555443
No 210
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=20.40 E-value=2.6e+02 Score=24.57 Aligned_cols=53 Identities=9% Similarity=0.105 Sum_probs=26.2
Q ss_pred CCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC--C-----CCHHHHHHHHHhcCCeEEEE
Q 014435 47 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--V-----YTVSELSKQVKDSNPKLVIT 102 (424)
Q Consensus 47 ~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~-----~~~~~i~~~l~~~~~~~ii~ 102 (424)
++||.|.+..|.-.. ...++...|+.++.++. . ...+++...++..++++|+.
T Consensus 109 ~~gd~vl~~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l 168 (390)
T 1d2f_A 109 ETGEGVVIHTPAYDA---FYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLL 168 (390)
T ss_dssp CTTCEEEEEESCCHH---HHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEE
T ss_pred CCCCEEEEcCCCcHH---HHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEE
Confidence 456666655443222 22333455665544432 1 45666666665445555553
No 211
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=20.25 E-value=2.6e+02 Score=24.35 Aligned_cols=81 Identities=10% Similarity=0.092 Sum_probs=49.9
Q ss_pred CCCCCCCCcHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCC-CccHHHHHHHHHHhCCeEecCCCCCCHHHHHHHHH
Q 014435 18 PLVLPSDPSFSMFKSIVIK---VSHSFRHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVK 93 (424)
Q Consensus 18 ~~~~~~~~Ty~el~~~~~~---~a~~L~~~gi~~g~~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~i~~~l~ 93 (424)
.... +.+++.+....... .-+.|.+.++++|++|.+.... ++-..++.++....|+.++.++. +++.+ ..++
T Consensus 138 ~~~i-~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~--~~~~~-~~~~ 213 (347)
T 1jvb_A 138 MYKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV--REEAV-EAAK 213 (347)
T ss_dssp EEEC-SSSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES--SHHHH-HHHH
T ss_pred eEEe-CCCCHHHcccchhhHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC--CHHHH-HHHH
Confidence 3445 67888765422211 1123455689999999999987 57777777666543887766653 33443 3346
Q ss_pred hcCCeEEEE
Q 014435 94 DSNPKLVIT 102 (424)
Q Consensus 94 ~~~~~~ii~ 102 (424)
+.+++.++.
T Consensus 214 ~~g~~~~~~ 222 (347)
T 1jvb_A 214 RAGADYVIN 222 (347)
T ss_dssp HHTCSEEEE
T ss_pred HhCCCEEec
Confidence 667776654
No 212
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=20.16 E-value=89 Score=27.29 Aligned_cols=61 Identities=15% Similarity=0.172 Sum_probs=38.6
Q ss_pred CCCCCEEEEECCCCccHHHHHHHHHHhCCeEecCCC--CCCHHHH---HHHHHhcCCeEEEEcccchH
Q 014435 46 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--VYTVSEL---SKQVKDSNPKLVITVPELWD 108 (424)
Q Consensus 46 i~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~i---~~~l~~~~~~~ii~~~~~~~ 108 (424)
+....+..+...+.+.++.-.|++-..|. ..+++ .-++.++ ...+++.++++||+++....
T Consensus 200 ~~~~~r~~v~~H~af~Yfa~~yGL~~~~~--~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~ 265 (321)
T 1xvl_A 200 VPANQRFLVSCEGAFSYLARDYGMEEIYM--WPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD 265 (321)
T ss_dssp SCGGGCEEEEEESTTHHHHHHTTCEEEEE--ESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCS
T ss_pred CcccCCEEEEECchHHHHHHHCCCeEEEe--eccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCCh
Confidence 33334556666778888888887765552 23333 3455554 45567779999999876544
Done!