Query 014441
Match_columns 424
No_of_seqs 69 out of 71
Neff 4.7
Searched_HMMs 46136
Date Fri Mar 29 05:09:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014441.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014441hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2622 Putative myrosinase pr 100.0 2E-98 4E-103 753.4 17.1 401 1-423 102-510 (510)
2 PF08217 DUF1712: Fungal domai 100.0 8.3E-68 1.8E-72 564.4 25.9 389 1-421 79-604 (604)
3 KOG2622 Putative myrosinase pr 97.9 2.7E-06 6E-11 88.1 0.7 126 225-359 305-443 (510)
4 PF03164 Mon1: Trafficking pro 96.8 0.97 2.1E-05 47.6 29.3 117 17-145 85-213 (415)
5 COG3266 DamX Uncharacterized p 38.6 43 0.00093 34.2 4.3 39 377-415 235-273 (292)
6 PF09144 YpM: Yersinia pseudot 26.4 85 0.0018 27.2 3.5 29 367-400 13-41 (117)
7 PF13464 DUF4115: Domain of un 25.6 1.1E+02 0.0023 24.4 3.9 31 371-401 1-31 (77)
8 PF11506 DUF3217: Protein of u 23.2 28 0.00061 29.9 0.1 17 207-223 11-27 (104)
9 PF05024 Gpi1: N-acetylglucosa 21.2 82 0.0018 30.0 2.8 34 16-58 132-165 (189)
10 PRK11901 hypothetical protein; 19.5 1.6E+02 0.0034 30.9 4.5 39 377-415 269-307 (327)
No 1
>KOG2622 consensus Putative myrosinase precursor [Defense mechanisms]
Probab=100.00 E-value=2e-98 Score=753.40 Aligned_cols=401 Identities=56% Similarity=0.877 Sum_probs=350.8
Q ss_pred CeEEEEecCCCChhHHHHHHHHHHHHHHHHHHHhcccHHHhhccCC--ChhHHHHhhhHHHHHhhh--cCCCCccccCCC
Q 014441 1 MVMVVEKGKDSDAIWRIDALRKVLKEVHSLFVMFYGSIRAMLEKDP--SGGLIRSHLYPFIMDYLS--DFPVGKKLQLPS 76 (424)
Q Consensus 1 mvmvv~k~kd~~~~~~d~~l~~vLkq~Y~mfrlF~Gs~~~~le~~~--s~~llr~~L~~F~~~YL~--~~~~~~~l~l~~ 76 (424)
|||||||+|+-+..|+++..+.+||+.+.+|.||+|+++++.+..| .|.+-|.++++|+++|+. ++++||.+|++.
T Consensus 102 mVmvv~~~~~~~~~~~i~k~~~~~~e~~ll~~~~~s~lr~~y~m~~lF~Gtf~~s~~~~~I~~~keRLdfFf~kylqll~ 181 (510)
T KOG2622|consen 102 MVMVVEKNKEIEAQWRIDKLRRVLKEVHLLFVMFSSSLRALYEMEPLFTGTFSRSHLYPFITDYKERLDFFFGKYLQLLH 181 (510)
T ss_pred EEEEEeeCChhheeeecchhHHHhhhhHHHHHHHHHHHHHHHHhchhhcCCcchhhcCchHHHHHHHHHHHHHhhccccc
Confidence 8999999999888886555544444444444444444444444433 444444444444444444 444444444444
Q ss_pred c--ccccccCCCceeeecCchhhHHHHHHHHhhhhhcCCCceeEEEeeccceeecCCChhHHHHHHHHHHhhcccccccC
Q 014441 77 F--RDCLKERGTVQMLTMGREAAIEVQSLVSVLDSCAGNSSCYSMILFHDLLVSTTLSPDDTINLFTYAVLRLSPNALSS 154 (424)
Q Consensus 77 ~--~D~Ld~~~gIqfLPLdk~~~L~VQsfvn~les~~~~~~~~t~~Ly~D~LVwSgL~~dDt~~Ly~Ylv~~L~p~~~~~ 154 (424)
+ ||+||++||||||||+|++||+||||||+|++|++ ++||++|||||+|||+||+||||..||+||+++|+|+|+++
T Consensus 182 ~~~~dlLd~~GgV~fl~l~~~tyL~VqSlv~~l~e~~~-v~~~smfLyqD~Lv~t~Ls~dD~~~Lf~ylt~~L~p~~lsp 260 (510)
T KOG2622|consen 182 FRSCDLLDERGGVQFLTLARDTYLEVQSLVNVLDECAG-VRCHSMFLYQDLLVSTTLSQDDTVDLFKYLTMRLTPRALSP 260 (510)
T ss_pred ccccchhhhcCCEEEEEcCcchhHHHHHHHHHHHHhhC-hhhhhhhhhhhhhheeccCcccHHHHHHHHHhhccccccCC
Confidence 3 69999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCcccccccCCCcccccCCCCccCCCCcccccccCCCCCC--CCCcccccccccccCcccccCCCceeecccccCCCCC
Q 014441 155 GVNSWSYIRRGSTSSHFVSGSALTHSGPVSEQIYHSSDTSP--VGNNINRVTRALQHGKWYKGKDGFLVTDIWGVDVGSL 232 (424)
Q Consensus 155 ~~s~~~ylr~g~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~pl~~~~~~~~~~Gflvt~~~~~~~~~~ 232 (424)
|++||||+|||.+++..+.. +....|+|+++++| +|.++.+|+||+|+|+|.++|+||++|+.|+.+
T Consensus 261 ~~~~~~~~~kGr~s~~~s~~-------st~ap~lG~~~t~~~~~~s~~g~~~~~~~~d~~~~~~~~f~~Td~~~~e---- 329 (510)
T KOG2622|consen 261 ETSSWSYLRKGRGSPIISSR-------STNAPHLGSFLTLPSHNGSDQGTVIRPLQPDKWCKGKDGFLNTDIWGLE---- 329 (510)
T ss_pred CccchhhhhcCCCCCCcccC-------CCCCcccccccccccccCCcccccccccCCCceeeeccceeeeeeeccc----
Confidence 99999999999887555332 33445789999988 455589999999999999999999999999999
Q ss_pred CCCCCEEEeccCceeEEEeeeeccCcEEEEeeecCcccchhhhHHHHHHHHhhhhhhhHHHHHHHHhccCCCCCCCCcCC
Q 014441 233 VCATPTVWLQQTEEAMYLCPYQFKSLTLILLIPVSSILNGEQGVALVKQQLLENASLKILKVEEKLSKGWGGENAYHVSG 312 (424)
Q Consensus 233 ~~~~P~V~l~~~~e~~~LivY~~~s~tlclli~~s~~~~~e~~~~~v~~qL~~las~~i~~iee~~sk~~~~e~a~h~~~ 312 (424)
.+|.||.++.++++|+++|++++.|+.++.+-..+.+++..+++.++|..++|+-+|+++||..+.+|+++||||.++
T Consensus 330 --~~~~il~~~~~~~~~~~~~a~~s~tlv~~rrl~~iV~~~L~i~~s~~~~~~n~~~r~~k~ee~p~f~~iyfN~~h~s~ 407 (510)
T KOG2622|consen 330 --ALPTILYQATQEAVYLLIYASKSLTLVLLRRLDAIVNGQLTISASKQQVIENASKRILKSEEEPSFGWIYFNAYHMSG 407 (510)
T ss_pred --cccchhhhhhhhHHHHHhhcccCcceeeeehhhhhcCcceeehhhhHHHHhcccchhccCcccCccceeeecchhccc
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEcCccccccCCCCCCccccCHHHHHHHHHHHhhhhhhhhhhhccCCCCCCcceEEEeecCCeEEEEeecCCeEEE
Q 014441 313 YRYLLVDGDRNISRASPPGKVTTLAKESLLALSKLRDEVDLEKSRAKRDNAGCEKDLEVSIRAKNNAWAIARITGGKELY 392 (424)
Q Consensus 313 yKYlyfN~mnla~rasp~~kv~tl~~esl~~l~~l~~di~~e~sr~~~~~~~~~~d~EiivKt~nD~WVV~r~s~~RElY 392 (424)
|||+.++..--+.|++|++|++++.|| .+||+|++|+|.||.|++ ++|+|||||++||+|||||++|+||+|
T Consensus 408 ~~~ll~~~~~~v~rssps~~ltt~~p~--~~lnkl~~dv~S~f~r~~------eed~Ei~Vka~sd~WVV~kk~~~r~ly 479 (510)
T KOG2622|consen 408 YRYLLVDNDTVVSRSSPSGKLTTLAPE--LALNKLREDVDSEFTRVK------EEDMEICVKAKSDYWVVAKKSRGRELY 479 (510)
T ss_pred eeeeeccCCceeeccCCCcceeecCCh--HHHHHHHHhhhccccccc------cccceeEEEecCcEEEEEEecCCceEE
Confidence 999999999999999999999999999 679999999999999996 789999999999999999999999999
Q ss_pred EEEecCccchhhHHHHHHHHHHhhccCcccC
Q 014441 393 MVLEKASETLLYASDAVEKFSNRYCNGAFSL 423 (424)
Q Consensus 393 VvL~qk~~~Lleisdevkk~~~~~~~g~f~~ 423 (424)
|||++||+||+|++|||+|||++||+|||++
T Consensus 480 mil~~~n~tL~dv~~~v~~~~~~~f~~iFf~ 510 (510)
T KOG2622|consen 480 MILEKKNATLLDVTDEVKRFSNRYFSGIFFM 510 (510)
T ss_pred EEEcCCcchhhhhHHHHHHHHHHhhhccccC
Confidence 9999999999999999999999999999986
No 2
>PF08217 DUF1712: Fungal domain of unknown function (DUF1712); InterPro: IPR013176 The function of this fungal family of proteins is unknown.
Probab=100.00 E-value=8.3e-68 Score=564.41 Aligned_cols=389 Identities=30% Similarity=0.416 Sum_probs=319.9
Q ss_pred CeEEEEecCCCCh-hHHHHHHHHHHHHHHHHHHHhcccHHHhhccCCChhHHHHhhhHHHHHhhhcCCCCccccCCCccc
Q 014441 1 MVMVVEKGKDSDA-IWRIDALRKVLKEVHSLFVMFYGSIRAMLEKDPSGGLIRSHLYPFIMDYLSDFPVGKKLQLPSFRD 79 (424)
Q Consensus 1 mvmvv~k~kd~~~-~~~d~~l~~vLkq~Y~mfrlF~Gs~~~~le~~~s~~llr~~L~~F~~~YL~~~~~~~~l~l~~~~D 79 (424)
|+|+|+..++... ......|+++|+++|+||+||||||+++++ +.+.++.+|+.||.+|+++ |+++..||
T Consensus 79 i~l~I~~~~~~~~~~~~~~~L~~~L~~~Y~~F~L~hGsfs~~l~---~r~~L~~~L~~F~~~fl~~------l~l~~~~~ 149 (604)
T PF08217_consen 79 IVLSINLPKEQSTKDGPEQYLLSVLKQAYSMFRLFHGSFSSLLE---GREKLKDRLEDFFSRFLQT------LNLPPQCD 149 (604)
T ss_pred EEEEEecCcCCccccchHHHHHHHHHHHHHHHHHHcCCHHHhcc---cHHHHHHHHHHHHHHHHHh------hcccccch
Confidence 6777773332211 133344999999999999999999999998 7889999999999999996 78666899
Q ss_pred ccccCCCc---------------------eeeecCchhhHHHH---------------HHHHhhhhhcCCCceeEEEeec
Q 014441 80 CLKERGTV---------------------QMLTMGREAAIEVQ---------------SLVSVLDSCAGNSSCYSMILFH 123 (424)
Q Consensus 80 ~Ld~~~gI---------------------qfLPLdk~~~L~VQ---------------sfvn~les~~~~~~~~t~~Ly~ 123 (424)
+++.|+|| |||||||++||+|| |||+.+|++|++..++|++|||
T Consensus 150 ~~~~~~~v~~~~~~~~~~~~~~~we~~i~q~l~l~~~~yL~i~di~vy~~p~~~~k~y~~i~~~~~~f~~i~~~s~~ly~ 229 (604)
T PF08217_consen 150 ILDGFGGVLWPDSFKVAEFEDKSWESSIKQFLPLDKESYLGIQDILVYHLPKSNIKTYGFIRNFESTFPSIPCYSNWLYH 229 (604)
T ss_pred HHHHhCCcccccccchhccccchhhhhhhhccccCchhhcCceeeeEecccccccccccHHHHHHhhcccccceeeeEEc
Confidence 99999999 99999999999999 9999999999966669999999
Q ss_pred cceeecCCChhH---------------------HHHHHHHHHhhcccccccCCCCcccccccCCCcccccCCCCccCCCC
Q 014441 124 DLLVSTTLSPDD---------------------TINLFTYAVLRLSPNALSSGVNSWSYIRRGSTSSHFVSGSALTHSGP 182 (424)
Q Consensus 124 D~LVwSgL~~dD---------------------t~~Ly~Ylv~~L~p~~~~~~~s~~~ylr~g~~~~~~~~~s~~~~~~~ 182 (424)
|++||+||+++| |++||+|++..++|.+..++.++|+|+|+|.+.....+++
T Consensus 230 ~~lv~~~Ls~~~l~~~~~y~e~~~~~~~~~~~~~~~l~n~~~~~~~~~~~~~ev~~~t~i~~s~s~~~~~~~~------- 302 (604)
T PF08217_consen 230 DHLVYSGLSSHDLAGNVHYKEQLSDEENTTEQSTRILYNYTLPISFPYDAVSEVGSTTGIRNSMSLFMSYTPS------- 302 (604)
T ss_pred CEEEEcccCcccccccceeccccccccccccHHHHHHHHHhhcccchhhhhhhhccceeeccCCccccccCCC-------
Confidence 999999999999 9999999999999999999999999999887743332211
Q ss_pred cccccccCCCCCCCCCcccccccccccCcccccCCCceeecccccCCCCCCCCCCEEEe----ccCceeEEEeeeeccC-
Q 014441 183 VSEQIYHSSDTSPVGNNINRVTRALQHGKWYKGKDGFLVTDIWGVDVGSLVCATPTVWL----QQTEEAMYLCPYQFKS- 257 (424)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~v~~pl~~~~~~~~~~Gflvt~~~~~~~~~~~~~~P~V~l----~~~~e~~~LivY~~~s- 257 (424)
.......++.+++..++.||.+ .+.||++..++..-.|... +++++++ ++..+++||||||+++
T Consensus 303 ----~~~~s~~~~~~~~~~~~~~~~~------~~~gfLISP~~~~~lp~~y-k~~k~~l~~~~~~~~~~y~LlvY~~~~~ 371 (604)
T PF08217_consen 303 ----WNFRSGSSNNEDSNAKVNRPNQ------DRYGFLISPLPDIFLPESY-KIRKVYLPFNLDQKEEEYYLLVYRYLDV 371 (604)
T ss_pred ----CccccCCCCCCCCccccccccc------ccccccccccccccccccc-cccccccccccCCcceeeEEEEEEECCc
Confidence 0001122234444556667765 5678887765444444333 5566665 3456899999999999
Q ss_pred cEEEEeeecCcccchhhhH----HHHHHHHhhhhhhhHHHHHHHHhccCCCCCCCCcCCeeEEEEcCccccccCCCCCCc
Q 014441 258 LTLILLIPVSSILNGEQGV----ALVKQQLLENASLKILKVEEKLSKGWGGENAYHVSGYRYLLVDGDRNISRASPPGKV 333 (424)
Q Consensus 258 ~tlclli~~s~~~~~e~~~----~~v~~qL~~las~~i~~iee~~sk~~~~e~a~h~~~yKYlyfN~mnla~rasp~~kv 333 (424)
+|+|||+|+.+..+..+.. ++++||++.+++ +|+|+++++++++++.|+++|||||||+||+|+|+|++.++
T Consensus 372 ltlcLf~~~~~~i~~~d~l~~L~~~L~pqls~L~~----~I~e~~~k~~~~~~~~~~~~fkYiyfN~~nla~kSSip~~~ 447 (604)
T PF08217_consen 372 LTLCLFVPAFSKIWDQDFLKDLDAQLGPQLSQLAS----DIAEQLSKNWSGSNSSHESSFKYIYFNKMNLAIKSSIPLKS 447 (604)
T ss_pred EEEEEEecCccccccHHHHHHHHHHHHHhHHHHhh----ccccccccccccccCCCCCCceEEEEcCCCceeecCCCCCC
Confidence 9999999984443333333 777777777777 49999999999888899999999999999999999999876
Q ss_pred c------ccCHHHHHHHHH-H------------------HhhhhhhhhhhhccCCCCCCcceEE----------------
Q 014441 334 T------TLAKESLLALSK-L------------------RDEVDLEKSRAKRDNAGCEKDLEVS---------------- 372 (424)
Q Consensus 334 ~------tl~~esl~~l~~-l------------------~~di~~e~sr~~~~~~~~~~d~Eii---------------- 372 (424)
+ ++++++|+++.+ | ..|++.+++|++ ++.+.+++.|+|
T Consensus 448 ~~~~~~~~i~~~vL~li~~gid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~nfl~~~~~~kl~el~~ 526 (604)
T PF08217_consen 448 TSLTSSSSIPPNVLRLIVNGIDQTFQRNSSSSSNTNGYNLKEVTTEKSRSK-NDKSKEKDKEYCNFLDSMSNDKLWELNQ 526 (604)
T ss_pred cccccccccccchHHHHHHhHHHHhhcccccccccccccCccCcccccccc-ccccchhhhhhhhhhhhcchhhHhhcCH
Confidence 4 577888887711 1 267788888988 777778889999
Q ss_pred --------------------EeecCCeEEEEeecCCeEEEEEEecC---------ccchhhHHHHHHHHHHhhccCcc
Q 014441 373 --------------------IRAKNNAWAIARITGGKELYMVLEKA---------SETLLYASDAVEKFSNRYCNGAF 421 (424)
Q Consensus 373 --------------------vKt~nD~WVV~r~s~~RElYVvL~qk---------~~~Lleisdevkk~~~~~~~g~f 421 (424)
+||+||+|||+|++|+||||||++++ +++++++++|++|+|.++|+|||
T Consensus 527 e~l~~l~~~~~s~~~~~Ee~l~~~~n~wl~~~~~~~~e~~vil~n~f~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~ 604 (604)
T PF08217_consen 527 ELLQFLTDIQNSRKDIQEERLKTLNNGWLVYIKSNSRELYVILKNWFDDDDPSKKSSTLLDLFEELGKDVSRWWDNIF 604 (604)
T ss_pred HHHHHHHHhhhccccchhhhheeeccEEEEEEecCCcEEEEEeeccccccccccCCcchHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999 99999999999999999999998
No 3
>KOG2622 consensus Putative myrosinase precursor [Defense mechanisms]
Probab=97.92 E-value=2.7e-06 Score=88.06 Aligned_cols=126 Identities=18% Similarity=0.089 Sum_probs=89.6
Q ss_pred cccCCCCCCCCCCEEEeccC--c-eeEEEeeeeccCcEEEEeeecCcccchhhhH---HHHHHHHhhhhhhhHHHHHHHH
Q 014441 225 WGVDVGSLVCATPTVWLQQT--E-EAMYLCPYQFKSLTLILLIPVSSILNGEQGV---ALVKQQLLENASLKILKVEEKL 298 (424)
Q Consensus 225 ~~~~~~~~~~~~P~V~l~~~--~-e~~~LivY~~~s~tlclli~~s~~~~~e~~~---~~v~~qL~~las~~i~~iee~~ 298 (424)
...+.++..++.|++|++++ + |..+.|+|++.+..+|+++.++..+++.... +.|.+||...|+. ++++.
T Consensus 305 ~~~~~~d~~~~~~~~f~~Td~~~~e~~~~il~~~~~~~~~~~~~a~~s~tlv~~rrl~~iV~~~L~i~~s~----~~~~~ 380 (510)
T KOG2622|consen 305 IRPLQPDKWCKGKDGFLNTDIWGLEALPTILYQATQEAVYLLIYASKSLTLVLLRRLDAIVNGQLTISASK----QQVIE 380 (510)
T ss_pred ccccCCCceeeeccceeeeeeeccccccchhhhhhhhHHHHHhhcccCcceeeeehhhhhcCcceeehhhh----HHHHh
Confidence 45566777788999999976 2 6699999999999999999999888888543 8999999999994 54444
Q ss_pred hccCCCCCCCCcCCeeEEEEc--Ccc-----ccccCCCCCCccccCHHHHHHHHHHHhhhhhhhhhhh
Q 014441 299 SKGWGGENAYHVSGYRYLLVD--GDR-----NISRASPPGKVTTLAKESLLALSKLRDEVDLEKSRAK 359 (424)
Q Consensus 299 sk~~~~e~a~h~~~yKYlyfN--~mn-----la~rasp~~kv~tl~~esl~~l~~l~~di~~e~sr~~ 359 (424)
....+-++-..+++++||||| ||+ +|.+.+|...- -|+-. +.-++-|++..+=|-+
T Consensus 381 n~~~r~~k~ee~p~f~~iyfN~~h~s~~~~ll~~~~~~v~rs--sps~~---ltt~~p~~~lnkl~~d 443 (510)
T KOG2622|consen 381 NASKRILKSEEEPSFGWIYFNAYHMSGYRYLLVDNDTVVSRS--SPSGK---LTTLAPELALNKLRED 443 (510)
T ss_pred cccchhccCcccCccceeeecchhccceeeeeccCCceeecc--CCCcc---eeecCChHHHHHHHHh
Confidence 432221221236999999999 998 66666655431 12332 3335666777766643
No 4
>PF03164 Mon1: Trafficking protein Mon1; InterPro: IPR004353 Members of this family have been called SAND proteins [] although these proteins do not contain a SAND domain. In Saccharomyces cerevisiae a protein complex of Mon1 and Ccz1 functions with the small GTPase Ypt7 to mediate vesicle trafficking to the vacuole [, ]. The Mon1/Ccz1 complex is conserved in eukaryotic evolution and members of this family (previously known as DUF254) are distant homologues to domains of known structure that assemble into cargo vesicle adapter (AP) complexes [, ].
Probab=96.75 E-value=0.97 Score=47.64 Aligned_cols=117 Identities=21% Similarity=0.236 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHhcc--cHHHhhccCCChhHHHHhh---hHHHHHhhhcCCCCccccCCCcccccc-cCCCceee
Q 014441 17 IDALRKVLKEVHSLFVMFYG--SIRAMLEKDPSGGLIRSHL---YPFIMDYLSDFPVGKKLQLPSFRDCLK-ERGTVQML 90 (424)
Q Consensus 17 d~~l~~vLkq~Y~mfrlF~G--s~~~~le~~~s~~llr~~L---~~F~~~YL~~~~~~~~l~l~~~~D~Ld-~~~gIqfL 90 (424)
+..++.-|.-+|......-- .+..++++.|..|+ |+-| +.++.+-+.. + ..|+.. .++.++-|
T Consensus 85 ~~~l~~qL~~ly~qils~lt~~~l~~~f~~r~n~Dl-R~lL~gtd~~~~~~~~~------~----~~~~~~~~~~~~~~l 153 (415)
T PF03164_consen 85 ESQLRKQLDYLYSQILSILTKPQLERIFEKRPNFDL-RRLLGGTDRFLDSLLDS------M----NRSPPSFLLNALECL 153 (415)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhccCCCcch-hhhccchHHHHHHHHHH------h----cCChHHHHhhcceEE
Confidence 56677777777765554333 47888888888775 5544 4455555442 1 234533 48899999
Q ss_pred ecCchhhHHHHHHHHhhhhhcCCCceeEEEeeccceee------cCCChhHHHHHHHHHHh
Q 014441 91 TMGREAAIEVQSLVSVLDSCAGNSSCYSMILFHDLLVS------TTLSPDDTINLFTYAVL 145 (424)
Q Consensus 91 PLdk~~~L~VQsfvn~les~~~~~~~~t~~Ly~D~LVw------SgL~~dDt~~Ly~Ylv~ 145 (424)
||.+..==++.+-+.......+ ...|++++.+++||. -+|.|+|+..|.+++..
T Consensus 154 ~l~~~~R~~i~~~l~~~~~~~~-~llf~lL~~~~klv~~~~~k~~~L~~~Dl~lL~n~v~~ 213 (415)
T PF03164_consen 154 PLRPSIRDKITSILLSCLNKRK-DLLFGLLFANNKLVSVVRPKKHSLHPSDLHLLFNLVRS 213 (415)
T ss_pred ECCHHHHHHHHHHHHHhccCCC-CcEEEEEEECCEEEEEEccCCCcCChHHHHHHHHHHhh
Confidence 9997643333333222113455 789999999999987 47999999999999655
No 5
>COG3266 DamX Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.63 E-value=43 Score=34.15 Aligned_cols=39 Identities=21% Similarity=0.160 Sum_probs=34.4
Q ss_pred CCeEEEEeecCCeEEEEEEecCccchhhHHHHHHHHHHh
Q 014441 377 NNAWAIARITGGKELYMVLEKASETLLYASDAVEKFSNR 415 (424)
Q Consensus 377 nD~WVV~r~s~~RElYVvL~qk~~~Lleisdevkk~~~~ 415 (424)
+|+||.-+..||.++|||+--.=+|-=++.++|++|...
T Consensus 235 ~~~~vy~t~rnG~pWYvv~~G~YatrqeA~~AvstLPa~ 273 (292)
T COG3266 235 KGYVVYETTRNGKPWYVVVYGNYATRQEAKAAVSTLPAD 273 (292)
T ss_pred CceEEeEeecCCceeEEEEecCcccHHHHHHHHhhCcHh
Confidence 579999999999999999985449999999999998763
No 6
>PF09144 YpM: Yersinia pseudotuberculosis mitogen; InterPro: IPR015227 Members of this family of Yersinia pseudotuberculosis mitogens adopt a sandwich structure consisting of nine strands in two beta sheets, in a jelly-roll topology. As with other superantigens, they are able to excessively activate T cells by binding to the T cell receptor []. ; PDB: 1PM4_B 1POQ_A.
Probab=26.44 E-value=85 Score=27.20 Aligned_cols=29 Identities=31% Similarity=0.384 Sum_probs=19.0
Q ss_pred CcceEEEeecCCeEEEEeecCCeEEEEEEecCcc
Q 014441 367 KDLEVSIRAKNNAWAIARITGGKELYMVLEKASE 400 (424)
Q Consensus 367 ~d~EiivKt~nD~WVV~r~s~~RElYVvL~qk~~ 400 (424)
.-+|+||+..-+- +++|-|||.||..-|+
T Consensus 13 gkgevci~gnkeg-----k~rggelyavl~stn~ 41 (117)
T PF09144_consen 13 GKGEVCIIGNKEG-----KSRGGELYAVLHSTNV 41 (117)
T ss_dssp TT-EEEEEESTT-------S-EEEEEEEEE-SST
T ss_pred cceeEEEEeCccc-----cccCceEEEEEEeccc
Confidence 3489999876552 6899999999985544
No 7
>PF13464 DUF4115: Domain of unknown function (DUF4115)
Probab=25.61 E-value=1.1e+02 Score=24.43 Aligned_cols=31 Identities=29% Similarity=0.413 Sum_probs=24.1
Q ss_pred EEEeecCCeEEEEeecCCeEEEEEEecCccc
Q 014441 371 VSIRAKNNAWAIARITGGKELYMVLEKASET 401 (424)
Q Consensus 371 iivKt~nD~WVV~r~s~~RElYVvL~qk~~~ 401 (424)
+.+++..+|||--+-.||+.+|--.-+++++
T Consensus 1 l~l~a~~~sWv~V~d~dG~~~~~~~l~~G~~ 31 (77)
T PF13464_consen 1 LVLTATGDSWVEVTDADGKVLFSGTLKAGET 31 (77)
T ss_pred CEEEEeCCeEEEEEeCCCcEeeeeeeCCCcE
Confidence 3578889999999989998888765555543
No 8
>PF11506 DUF3217: Protein of unknown function (DUF3217); InterPro: IPR024506 This family of proteins with unknown function appears to be restricted to Mycoplasma.; PDB: 2HQL_E.
Probab=23.17 E-value=28 Score=29.85 Aligned_cols=17 Identities=53% Similarity=0.800 Sum_probs=13.5
Q ss_pred cccCcccccCCCceeec
Q 014441 207 LQHGKWYKGKDGFLVTD 223 (424)
Q Consensus 207 l~~~~~~~~~~Gflvt~ 223 (424)
+.+.+|++.|.||+||-
T Consensus 11 IeS~kWS~~KTGF~VTI 27 (104)
T PF11506_consen 11 IESYKWSKKKTGFLVTI 27 (104)
T ss_dssp EEEEEE-TTSSEEEEEE
T ss_pred eehhcccccCceEEEEE
Confidence 56789999999999773
No 9
>PF05024 Gpi1: N-acetylglucosaminyl transferase component (Gpi1); InterPro: IPR007720 Glycosylphosphatidylinositol (GPI) represents an important anchoring molecule for cell surface proteins. The first step in its synthesis is the transfer of N-acetylglucosamine (GlcNAc) from UDP-N-acetylglucosamine to phosphatidylinositol (PI). This chemically simple step is genetically complex because three or four genes are required in both Saccharomyces cerevisiae (GPI1, GPI2 and GPI3) and mammals (GPI1, PIG A, PIG H and PIG C), respectively [].; GO: 0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity, 0006506 GPI anchor biosynthetic process, 0016021 integral to membrane
Probab=21.15 E-value=82 Score=29.98 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHhhccCCChhHHHHhhhHH
Q 014441 16 RIDALRKVLKEVHSLFVMFYGSIRAMLEKDPSGGLIRSHLYPF 58 (424)
Q Consensus 16 ~d~~l~~vLkq~Y~mfrlF~Gs~~~~le~~~s~~llr~~L~~F 58 (424)
--.+|+..++-+.++|++|.|. +.+ .+|+|.++.
T Consensus 132 ~~~ly~~ql~~l~sL~~LFrGk-----K~N----~LR~R~Ds~ 165 (189)
T PF05024_consen 132 SAKLYRWQLSVLKSLFRLFRGK-----KYN----VLRNRVDSC 165 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-----cch----hhhccccCC
Confidence 3468899999999999999998 432 367777764
No 10
>PRK11901 hypothetical protein; Reviewed
Probab=19.47 E-value=1.6e+02 Score=30.87 Aligned_cols=39 Identities=13% Similarity=0.176 Sum_probs=33.7
Q ss_pred CCeEEEEeecCCeEEEEEEecCccchhhHHHHHHHHHHh
Q 014441 377 NNAWAIARITGGKELYMVLEKASETLLYASDAVEKFSNR 415 (424)
Q Consensus 377 nD~WVV~r~s~~RElYVvL~qk~~~Lleisdevkk~~~~ 415 (424)
.++||+-.+.+|+..|||+---=++.=+|..++++|-+.
T Consensus 269 ~~~~VYqT~RnGkpWYVVvyG~Y~Sr~eAk~Ai~sLPa~ 307 (327)
T PRK11901 269 SHYHVYETKRDGKPWYVLVSGNYASSAEAKRAIATLPAE 307 (327)
T ss_pred CceEEEEEEECCceEEEEEecCcCCHHHHHHHHHhCCHH
Confidence 569999999999999999995458999999999887654
Done!