Query 014441
Match_columns 424
No_of_seqs 69 out of 71
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 11:37:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014441.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014441hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pm4a_ b.135.1.1 (A:) Superan 29.4 25 0.0018 27.2 4.0 29 367-400 13-41 (117)
2 d1wjwa_ d.129.2.1 (A:) Phospho 17.4 55 0.004 25.5 3.9 44 377-420 55-100 (112)
3 d2d8xa2 g.39.1.3 (A:8-32) Pinc 16.8 19 0.0014 21.6 0.6 9 372-380 12-20 (26)
4 d1ldda_ a.4.5.34 (A:) Anaphase 13.8 50 0.0036 24.3 2.5 12 24-35 25-36 (74)
5 d1ckaa_ b.34.2.1 (A:) C-Crk, N 12.8 88 0.0064 20.9 3.5 22 372-393 28-49 (57)
6 d1ji1a2 b.71.1.1 (A:555-637) M 12.3 1.1E+02 0.0077 21.6 4.1 23 377-399 11-33 (83)
7 d3bmva3 b.71.1.1 (A:407-495) C 10.2 1.5E+02 0.011 22.1 4.4 26 375-400 8-33 (89)
8 d2c4ka1 c.61.1.2 (A:7-166) PRP 10.2 43 0.0031 27.6 1.2 43 366-415 36-84 (160)
9 d2rn8a1 b.34.2.1 (A:176-228) B 10.1 77 0.0056 20.9 2.4 21 373-393 26-46 (53)
10 d2gkea1 d.21.1.1 (A:1-130) Dia 9.7 63 0.0046 25.4 2.1 26 392-417 13-38 (130)
No 1
>d1pm4a_ b.135.1.1 (A:) Superantigen (mitogen) Ypm {Yersinia pseudotuberculosis [TaxId: 633]}
Probab=29.40 E-value=25 Score=27.20 Aligned_cols=29 Identities=34% Similarity=0.395 Sum_probs=22.3
Q ss_pred CcceEEEeecCCeEEEEeecCCeEEEEEEecCcc
Q 014441 367 KDLEVSIRAKNNAWAIARITGGKELYMVLEKASE 400 (424)
Q Consensus 367 ~d~EiivKt~nD~WVV~r~s~~RElYVvL~qk~~ 400 (424)
.-+|+||+..-+- +++|-|||.||..-|+
T Consensus 13 gkgevci~gnkeg-----k~rggelyavl~stn~ 41 (117)
T d1pm4a_ 13 GKGEVCIIGNKEG-----KTRGGELYAVLHSTNV 41 (117)
T ss_dssp TTCEEEEEESTTC-----CCCCEEEEEEEECSCT
T ss_pred cceeEEEEeCccc-----cccCcEEEEEEeecCC
Confidence 3489999876552 6899999999985443
No 2
>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.36 E-value=55 Score=25.53 Aligned_cols=44 Identities=20% Similarity=0.185 Sum_probs=34.1
Q ss_pred CCeEEEEeecCCeEEEEEEec-Cc-cchhhHHHHHHHHHHhhccCc
Q 014441 377 NNAWAIARITGGKELYMVLEK-AS-ETLLYASDAVEKFSNRYCNGA 420 (424)
Q Consensus 377 nD~WVV~r~s~~RElYVvL~q-k~-~~Lleisdevkk~~~~~~~g~ 420 (424)
.|.||.-|.|+---+..|.-. .+ +.+-++.++++.+-.+.|+|.
T Consensus 55 ~~grvlIRpSGTEp~iRi~vEa~~~~~~~~i~~~i~~lv~~~~~g~ 100 (112)
T d1wjwa_ 55 TLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVSLLVFQLAGGI 100 (112)
T ss_dssp SSEEEEEECSSSSSSEEEEEEESSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CceEEEEEeCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhCCc
Confidence 468999999888776665553 33 667778999999999999884
No 3
>d2d8xa2 g.39.1.3 (A:8-32) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.77 E-value=19 Score=21.61 Aligned_cols=9 Identities=56% Similarity=1.095 Sum_probs=8.0
Q ss_pred EEeecCCeE
Q 014441 372 SIRAKNNAW 380 (424)
Q Consensus 372 ivKt~nD~W 380 (424)
+||+||+.|
T Consensus 12 vikamn~~w 20 (26)
T d2d8xa2 12 VIKAMNNSW 20 (26)
T ss_dssp CEEETTEEE
T ss_pred HHHHHhccC
Confidence 589999999
No 4
>d1ldda_ a.4.5.34 (A:) Anaphase promoting complex (APC) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=13.84 E-value=50 Score=24.33 Aligned_cols=12 Identities=25% Similarity=0.517 Sum_probs=10.6
Q ss_pred HHHHHHHHHHhc
Q 014441 24 LKEVHSLFVMFY 35 (424)
Q Consensus 24 Lkq~Y~mfrlF~ 35 (424)
|.++|.|.|||.
T Consensus 25 leRIh~mLkmfv 36 (74)
T d1ldda_ 25 LHKIHSFLKITV 36 (74)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHHc
Confidence 568999999996
No 5
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=12.82 E-value=88 Score=20.90 Aligned_cols=22 Identities=18% Similarity=0.179 Sum_probs=16.4
Q ss_pred EEeecCCeEEEEeecCCeEEEE
Q 014441 372 SIRAKNNAWAIARITGGKELYM 393 (424)
Q Consensus 372 ivKt~nD~WVV~r~s~~RElYV 393 (424)
|+...++.|..||..++++=+|
T Consensus 28 v~~~~~~~Ww~~~~~~g~~G~v 49 (57)
T d1ckaa_ 28 IRDKPEEQWWNAEDSEGKRGMI 49 (57)
T ss_dssp EEECSSSSEEEEECTTSCEEEE
T ss_pred EEEEcCCCeEEEEECCCCEEEE
Confidence 4566778899999888876554
No 6
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]}
Probab=12.30 E-value=1.1e+02 Score=21.58 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=20.5
Q ss_pred CCeEEEEeecCCeEEEEEEecCc
Q 014441 377 NNAWAIARITGGKELYMVLEKAS 399 (424)
Q Consensus 377 nD~WVV~r~s~~RElYVvL~qk~ 399 (424)
++-++.+|..++-++.|++|+..
T Consensus 11 ~~v~ay~R~~~~e~vlV~~N~s~ 33 (83)
T d1ji1a2 11 NKIYSYGRFDNVNRIAVVLNNDS 33 (83)
T ss_dssp TTEEEEEEECSSCEEEEEEECSS
T ss_pred CCEEEEEEEcCCcEEEEEEeCCC
Confidence 57899999999999999999755
No 7
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]}
Probab=10.22 E-value=1.5e+02 Score=22.12 Aligned_cols=26 Identities=12% Similarity=0.254 Sum_probs=23.0
Q ss_pred ecCCeEEEEeecCCeEEEEEEecCcc
Q 014441 375 AKNNAWAIARITGGKELYMVLEKASE 400 (424)
Q Consensus 375 t~nD~WVV~r~s~~RElYVvL~qk~~ 400 (424)
..+|-||..|+-+.-...|++||..+
T Consensus 8 in~DvyvyeR~~~~~~vlVAiNr~~~ 33 (89)
T d3bmva3 8 INNDVYIYERKFGNNVALVAINRNLS 33 (89)
T ss_dssp ECSSEEEEEEEETTEEEEEEEECCSS
T ss_pred ECCCEEEEEEecCCcEEEEEEECCCC
Confidence 46899999999999999999998754
No 8
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.16 E-value=43 Score=27.63 Aligned_cols=43 Identities=14% Similarity=0.308 Sum_probs=31.1
Q ss_pred CCcceEEEeecCCeEEEEeecCCeEEEEEEec-C--ccchhhH---HHHHHHHHHh
Q 014441 366 EKDLEVSIRAKNNAWAIARITGGKELYMVLEK-A--SETLLYA---SDAVEKFSNR 415 (424)
Q Consensus 366 ~~d~EiivKt~nD~WVV~r~s~~RElYVvL~q-k--~~~Llei---sdevkk~~~~ 415 (424)
-.|+|+.||-..+ -++++.|||-.- . |++|+|. -|++|+.+++
T Consensus 36 F~DGE~~v~i~e~-------vrg~~V~ivqs~~~~~n~~lmeLll~~da~k~~~a~ 84 (160)
T d2c4ka1 36 ETNGETRVEIKES-------VRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACAR 84 (160)
T ss_dssp CTTSCEEEEECSC-------CTTCCEEEECCCCSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCCCeeeccCcc-------ccCCceEEEeccCcchHHHHHHHHHHHHHHHHhCcc
Confidence 3589999998776 579999998542 1 4666665 7888876654
No 9
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}
Probab=10.09 E-value=77 Score=20.89 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=14.5
Q ss_pred EeecCCeEEEEeecCCeEEEE
Q 014441 373 IRAKNNAWAIARITGGKELYM 393 (424)
Q Consensus 373 vKt~nD~WVV~r~s~~RElYV 393 (424)
++..++-|-.+|..++|+=+|
T Consensus 26 l~~~~~~Ww~~~~~~g~~G~v 46 (53)
T d2rn8a1 26 LDSSEIHWWRVQDKNGHEGYA 46 (53)
T ss_dssp CCCSCSSCEEEECTTSCEEEE
T ss_pred eEEcCCCeEEEEeCCCCEEEE
Confidence 355566677778788887665
No 10
>d2gkea1 d.21.1.1 (A:1-130) Diaminopimelate epimerase {Haemophilus influenzae [TaxId: 727]}
Probab=9.66 E-value=63 Score=25.43 Aligned_cols=26 Identities=15% Similarity=0.738 Sum_probs=16.6
Q ss_pred EEEEecCccchhhHHHHHHHHHHhhc
Q 014441 392 YMVLEKASETLLYASDAVEKFSNRYC 417 (424)
Q Consensus 392 YVvL~qk~~~Lleisdevkk~~~~~~ 417 (424)
|||++....+...-++.++++|+|++
T Consensus 13 FviiD~~~~~~~~~~~~i~~i~~r~~ 38 (130)
T d2gkea1 13 FVVVDGVTQNVFFTPETIRRLANRHC 38 (130)
T ss_dssp EEEEECSSSCCCCCHHHHHHHHCTTT
T ss_pred EEEEECCCCcCCCCHHHHHHHhhccc
Confidence 56665333333233688999999986
Done!