BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014443
(424 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BKU8|TM87B_MOUSE Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1
Length = 555
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 9/209 (4%)
Query: 211 PDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVA 270
P GY+ PLM FY +M + Y++ G+ W L WKDI+++ ++I VI LGM E A
Sbjct: 206 PHGYISASDWPLMIFYMVMCIVYILYGVLWLLWSACYWKDILRIQFWIAAVIFLGMLEKA 265
Query: 271 VWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVI 330
V+Y EY N NSTG G+ ++A ++VK+T++RLL++ VS+GYG+V+P LG + +VI
Sbjct: 266 VFYSEYQNINSTGLSTQGLLIFAELISAVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVI 325
Query: 331 FLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLP---VTVLDVCFILWIFSSLSRTLE 387
LGL+Y + + A+E G + G L VL + V+D F+ +IF SL++T++
Sbjct: 326 GLGLLYLIFA-AIE-----GVMRVIGGSKHLAVVLTDIVLAVIDSIFVWFIFISLAQTMK 379
Query: 388 KLQMRRNLAKLELYRKFTNALAACVLLSI 416
L++R+N K LYR FTN L VL SI
Sbjct: 380 TLRLRKNTVKFSLYRHFTNTLIFAVLASI 408
>sp|Q28EW0|TM87A_XENTR Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2
SV=1
Length = 541
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 128/212 (60%), Gaps = 11/212 (5%)
Query: 209 KNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCE 268
K P G++ PLM FY +M + Y++L L WF+ WKD++++ ++I VI LGM E
Sbjct: 197 KGPHGFISASDWPLMIFYMVMCIMYILLALLWFIWSACYWKDLLRIQFWIAAVIFLGMLE 256
Query: 269 VAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFK 328
AV+Y EY N ++TG G+ ++A +S+K+T++RLL+ VS+GYG+++P LG + +
Sbjct: 257 KAVYYAEYQNTDNTGVSSHGLLIFAELISSIKRTLARLLVTIVSLGYGIIKPRLGAVMHR 316
Query: 329 VIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVL----PVTVLDVCFILWIFSSLSR 384
V+ +G++YFV F + + G + VL P+ +LD WIF SL++
Sbjct: 317 VVGMGVLYFV-------FAAVEGVMRIIGAKEYDLVLLAGIPLALLDSGLCWWIFVSLAQ 369
Query: 385 TLEKLQMRRNLAKLELYRKFTNALAACVLLSI 416
T++ L++R+N K LYR FTN L +L SI
Sbjct: 370 TMKTLKLRKNTVKYSLYRHFTNTLIFAILASI 401
>sp|Q96K49|TM87B_HUMAN Transmembrane protein 87B OS=Homo sapiens GN=TMEM87B PE=1 SV=1
Length = 555
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 130/211 (61%), Gaps = 3/211 (1%)
Query: 211 PDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVA 270
P GY+ PLM FY +M + Y++ G+ W WKDI+++ ++I VI LGM E A
Sbjct: 205 PHGYISASDWPLMIFYMVMCIVYILYGILWLTWSACYWKDILRIQFWIAAVIFLGMLEKA 264
Query: 271 VWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVI 330
V+Y EY N ++TG G+ ++A +++K+T++RLL++ VS+GYG+V+P LG + +VI
Sbjct: 265 VFYSEYQNISNTGLSTQGLLIFAELISAIKRTLARLLVIIVSLGYGIVKPRLGTVMHRVI 324
Query: 331 FLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQ 390
LGL+Y + + + +G N A + + + V+D F+ +IF SL++T++ L+
Sbjct: 325 GLGLLYLIFAAVEGVMRVIGGSNHL---AVVLDDIILAVIDSIFVWFIFISLAQTMKTLR 381
Query: 391 MRRNLAKLELYRKFTNALAACVLLSIAWIGF 421
+R+N K LYR F N L VL SI ++G+
Sbjct: 382 LRKNTVKFSLYRHFKNTLIFAVLASIVFMGW 412
>sp|Q8NBN3|TM87A_HUMAN Transmembrane protein 87A OS=Homo sapiens GN=TMEM87A PE=1 SV=3
Length = 555
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 209 KNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCE 268
K P YL + PLM F+ +M + Y++ G+ W W+D++++ ++I VI LGM E
Sbjct: 213 KGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLE 272
Query: 269 VAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFK 328
AV+Y E+ N G G + A ++VK++++R L++ VS+GYG+V+P LG K
Sbjct: 273 KAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHK 332
Query: 329 VIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEK 388
V+ G +Y + S + G D + A +P+ LD WIF SL++T++
Sbjct: 333 VVVAGALYLLFSGMEGVLRVTGAQTDLASLA----FIPLAFLDTALCWWIFISLTQTMKL 388
Query: 389 LQMRRNLAKLELYRKFTNALAACVLLSIAWI 419
L++RRN+ KL LYR FTN L V SI +I
Sbjct: 389 LKLRRNIVKLSLYRHFTNTLILAVAASIVFI 419
>sp|Q8BXN9|TM87A_MOUSE Transmembrane protein 87A OS=Mus musculus GN=Tmem87a PE=1 SV=1
Length = 555
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 209 KNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCE 268
K P YL + PLM F+ +M + Y++ G+ W W+D++++ ++I VI LGM E
Sbjct: 213 KGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMFE 272
Query: 269 VAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFK 328
AV+Y E+ N G + A ++VK++++R L++ VS+GYG+V+P LG K
Sbjct: 273 KAVFYAEFQNIRYKGESVQNALVLAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHK 332
Query: 329 VIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEK 388
V+ G +Y + S + G D + A +P+ LD WIF SL++T++
Sbjct: 333 VVVAGALYLLFSGMEGVLRVTGAQTDLASLA----FIPLAFLDTALCWWIFISLTQTMKL 388
Query: 389 LQMRRNLAKLELYRKFTNALAACVLLSIAWI 419
L++RRN+ KL LYR FTN L V SI +I
Sbjct: 389 LKLRRNIVKLSLYRHFTNTLILAVAASIVFI 419
>sp|O13989|YEG7_SCHPO Uncharacterized protein C26H5.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC26H5.07c PE=3 SV=2
Length = 505
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 20/247 (8%)
Query: 167 GTNEETQISE-EVEIERTGMYYLYFMYCDPQLKGT--MIKGRTVWKNPDGYLPGKMAPLM 223
+ E+ +S + +E++G+Y ++ L+G+ K W+N G L P +
Sbjct: 126 AVDAESMVSPLKYPVEQSGLYCVF----TAPLEGSSEAYKITVTWENYFGNLDATDYPHL 181
Query: 224 TFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGM-CE-VAVWYFEYANFN- 280
++ ++G+ W + D++Q+ YI+GV+AL + C V+ YF +AN
Sbjct: 182 FLNPILLAINCLIGIWWSFIMFRYRHDLLQVQKYISGVVALSIVCTMVSTGYFYFANSKG 241
Query: 281 -STGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVA 339
+TGS+ L S +++ LLL VS+GY +V P+LG L K L + FV+
Sbjct: 242 YTTGSKVFAFFLSLAQ--SARQSYFGFLLLIVSLGYSIVVPSLGSLLRKCQILAGLQFVS 299
Query: 340 SEAL--EMFENLGNINDFSGKAKLFFVLPVTVLDV-CFILWIFSSLSRTLEKLQMRRNLA 396
S +F + N + F PV ++ + LWI +L+ T+ L++R+
Sbjct: 300 SCFFLSSLFISPSNKESLV----ILFAAPVFLITLFAMFLWIVLALNNTIRDLRIRKQTV 355
Query: 397 KLELYRK 403
K ++Y +
Sbjct: 356 KAQMYTR 362
>sp|P32857|PTM1_YEAST Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PTM1 PE=1 SV=2
Length = 523
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 40/238 (16%)
Query: 208 WKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMC 267
++N G L G + YGL+++AY+V + F + +++ L Y+
Sbjct: 181 FRNAYGQLAGTEINKLPLYGLLAVAYVVAMALYSFAFWKHKHELLPLQKYLLAFFVFLTA 240
Query: 268 E-VAVWYFEYANFNSTGSRPMGITLWAV---TFTSVKKTVSRLLLLAVSMGYGVVRPTL- 322
E + VW Y + + GI ++ V T+ K T S LLL +++GYG+V P L
Sbjct: 241 ETIFVW--AYYDLKNEKGDTAGIKVYMVFLSILTAGKVTFSFFLLLIIALGYGIVYPKLN 298
Query: 323 ----------GGLTFKVI--FLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVL 370
G LT+ + FL Y EA L ++P+ +
Sbjct: 299 KTLMRRCQMYGALTYAICIGFLIQSYLTDMEA-------------PSPLILITLIPMALA 345
Query: 371 DVCFILWIFSSLSRTLEKLQMRRNLAKLELYRK--------FTNALAACVLLSIAWIG 420
+ F I S+++T+ L+ +R + KL +Y+K F + LA ++ S ++G
Sbjct: 346 LIIFYYMIIRSMTKTVIYLKEQRQIVKLNMYKKLLYIIYASFLSVLAGSIVSSFIYVG 403
>sp|A6ZZS6|PTM1_YEAS7 Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain YJM789)
GN=PTM1 PE=3 SV=1
Length = 523
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 40/238 (16%)
Query: 208 WKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMC 267
++N G L G + YGL+++AY+V + F + +++ L Y+
Sbjct: 181 FRNAYGQLAGTEINKLPLYGLLAVAYVVAMALYSFAFWKHKHELLPLQKYLLAFFVFLTA 240
Query: 268 E-VAVWYFEYANFNSTGSRPMGITLWAV---TFTSVKKTVSRLLLLAVSMGYGVVRPTL- 322
E + VW Y + + GI ++ V T+ K T S LLL +++GYG+V P L
Sbjct: 241 ETIFVW--AYYDLKNEKGDTAGIKVYMVFLSILTAGKVTFSFFLLLIIALGYGIVYPKLN 298
Query: 323 ----------GGLTFKVI--FLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVL 370
G LT+ + FL Y EA L ++P+ +
Sbjct: 299 KTLMRRCQMYGALTYAICIGFLIQSYLTDMEA-------------PSPLILITLIPMALA 345
Query: 371 DVCFILWIFSSLSRTLEKLQMRRNLAKLELYRK--------FTNALAACVLLSIAWIG 420
+ F I S+++T+ L+ +R + KL +Y+K F + LA ++ S ++G
Sbjct: 346 LIIFYYMIIRSMTKTVIYLKEQRQIVKLNMYKKLLYIIYASFLSVLAGSIVSSFIYVG 403
>sp|P38745|YHB7_YEAST Uncharacterized membrane protein YHL071W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YHL017W PE=1
SV=1
Length = 532
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 41/323 (12%)
Query: 106 VEAIILEVKERERIGGSFLKTDL--LCCTHNLSKEGSC---SVGEVIIH---VDP---EN 154
V + + ++ E IG ++ +C + L G C S G+ II +DP +
Sbjct: 69 VSVAVFDFQDYEHIGVRLPNGEIQYICDDYALDL-GLCEDSSEGQFIIQETAIDPFTSKE 127
Query: 155 HEWPRRIKAFFQ---GTNEETQISEEVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNP 211
H+ +I F Q GTN++ I +TG Y + + K ++N
Sbjct: 128 HKLTSQILTFTQQELGTNDKV-----YSINKTGYYCVTTSS--FISSSSKFKATVNFRNA 180
Query: 212 DGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYI-TGVIALGMCEVA 270
G L A M Y +++AY V L + + +++ L YI I L +
Sbjct: 181 YGQLDASEAYKMPIYAFLAVAYAVCTLVYSWLCWKHRHELLPLQRYILVFCIFLTADTIF 240
Query: 271 VWYFEYANFNSTGSRPMGITLWAV---TFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTF 327
VW + Y N G+ + + ++ V F++ K T + LL L +S+GYG+V P L
Sbjct: 241 VWMY-YIIENQKGNSSVALHVYMVFISIFSAGKMTFTLLLALLISLGYGIVYPKLDRTLL 299
Query: 328 K-------VIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFS 380
+ F V F+ + + E+L N+ L +P+ + F S
Sbjct: 300 RRCQIFAIFTFAVCVAFLVQKYSQNSESLSNL-------ILITAIPLVLCLFAFYYLTLS 352
Query: 381 SLSRTLEKLQMRRNLAKLELYRK 403
S+++T+ L+ + + KL +YRK
Sbjct: 353 SMNKTMTYLREQNQVVKLNMYRK 375
>sp|Q148L1|GP108_BOVIN Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1
Length = 548
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 25/238 (10%)
Query: 184 GMYYLYFMYCDPQLKG--------TMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLV 235
G Y L F CD + G MI+ KNP+GYL PL Y +MS +L
Sbjct: 223 GQYNLNFHNCDNSVPGREQPFDITVMIRE----KNPEGYLSAAEIPLFKLYMVMSACFLG 278
Query: 236 LGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVT 295
G+ W + ++ ++H+ + + + Y NS G G+ +
Sbjct: 279 AGIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYI 338
Query: 296 FTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFK----VIFLGLVYFVASEALEMFENLGN 351
+K + + + + G+ V+ L K VI L ++ VA +E E
Sbjct: 339 THLLKGALLFITIALIGSGWAFVKYVLSDKEKKIFGIVIPLQVLANVAYIVMESREE--G 396
Query: 352 INDFS-GKAKLFFVLPVTVLDVCF-ILWIFSSL---SRTLEKLQMRRNLAKLELYRKF 404
+D+ K LF V + + F ++W L S T K+ + NLAKL+L+R +
Sbjct: 397 ASDYGIWKEILFLVDLICCGTILFPVVWSIRHLQDASGTDGKVAV--NLAKLKLFRHY 452
>sp|Q8BUV8|GP107_MOUSE Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2
Length = 551
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 181 ERTGMYYLYFMYCD-----PQLKGTM-IKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYL 234
++ G+Y LYF C P + + + KNP+ YL PL Y M+L +
Sbjct: 214 DQEGLYSLYFHKCSGNNVKPGEQASFSLNIAITEKNPNSYLSAGEIPLPKLYVSMALFFF 273
Query: 235 VLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAV 294
+ G W + D+ ++H+ + AL + F +++ S+ I WAV
Sbjct: 274 LSGTIWIHILRKRRNDVFKIHWLMA---ALPFTKSLSLVFHAIDYHYISSQGFPIEGWAV 330
Query: 295 TFTSVKKTVSRLLLLAVSM---GYGVVRPTLGGLTFK----VIFLGLVYFVASEALEMFE 347
+ LL + +++ G+ ++ L K VI L ++ VA +E E
Sbjct: 331 VYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTE 390
Query: 348 NLGNINDFSGKAKLFFVLPVTVLDVCF-ILWIFSSLSR-TLEKLQMRRNLAKLELYRKF 404
G K LF V + + F ++W L + + NLAKL L+R +
Sbjct: 391 E-GTTEYGLWKDSLFLVDLLCCGAILFPVVWSIRHLQEASATDGKAAINLAKLRLFRHY 448
>sp|Q5VW38|GP107_HUMAN Protein GPR107 OS=Homo sapiens GN=GPR107 PE=1 SV=1
Length = 600
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 181 ERTGMYYLYFMYCD----PQLKGTM-IKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLV 235
++ G+Y LYF C P K T + KNPD YL PL Y M+ + +
Sbjct: 216 DQEGLYSLYFHKCLGKELPSDKFTFSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFL 275
Query: 236 LGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVT 295
G W + D+ ++H+ + AL + F +++ S+ I WAV
Sbjct: 276 SGTIWIHILRKRRNDVFKIHWLMA---ALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVV 332
Query: 296 FTSVKKTVSRLLLLAVSM 313
+ LL + +++
Sbjct: 333 YYITHLLKGALLFITIAL 350
>sp|Q9NPR9|GP108_HUMAN Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3
Length = 543
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 35/243 (14%)
Query: 184 GMYYLYFMYCDPQLKG--------TMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLV 235
G Y L F C+ + G MI+ KNPDG+L PL Y +MS +L
Sbjct: 218 GQYSLNFHNCNNSVPGKEHPFDITVMIRE----KNPDGFLSAAEMPLFKLYMVMSACFLA 273
Query: 236 LGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVT 295
G+ W + + ++H+ + AL + F N+ S+ I AV
Sbjct: 274 AGIFWVSILCRNTYSVFKIHWLMA---ALAFTKSISLLFHSINYYFINSQGHPIEGLAVM 330
Query: 296 FTSVKKTVSRLLLLAVSM---GYGVVRPTLG-------GLTFKVIFLGLVYFVASEALEM 345
+ LL + +++ G+ ++ L G+ + L V ++ E+ E
Sbjct: 331 YYIAHLLKGALLFITIALIGSGWAFIKYVLSDKEKKVFGIVIPMQVLANVAYIIIESREE 390
Query: 346 FENLGNINDFSGKAKLFFVLPVTVLDVCF-ILWIFSSL---SRTLEKLQMRRNLAKLELY 401
G + K LF V + + F ++W L S T K+ + NLAKL+L+
Sbjct: 391 ----GASDYVLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAV--NLAKLKLF 444
Query: 402 RKF 404
R +
Sbjct: 445 RHY 447
>sp|Q6P6V6|GP108_RAT Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1
Length = 577
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 25/238 (10%)
Query: 184 GMYYLYFMYCDPQLKG--------TMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLV 235
G Y L F C + G MI+ KNP+G+L PL Y +MS +L
Sbjct: 251 GQYSLNFHNCYNTIPGQEQPFDLTVMIRE----KNPEGFLSAAEIPLFKLYLIMSACFLA 306
Query: 236 LGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVT 295
G+ W + + ++H+ + + + Y NS G G+ +
Sbjct: 307 AGIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYI 366
Query: 296 FTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFK----VIFLGLVYFVASEALEMFENLGN 351
+K + + + + G+ V+ L K VI L ++ VA +E E
Sbjct: 367 THLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREE--G 424
Query: 352 INDFS-GKAKLFFVLPVTVLDVCF-ILWIFSSL---SRTLEKLQMRRNLAKLELYRKF 404
+D+ K LF V + + F ++W L S T K+ M NLAKL+L+R +
Sbjct: 425 ASDYGLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAM--NLAKLKLFRHY 480
>sp|Q9Y7Y9|YOD2_SCHPO Uncharacterized membrane protein C18A7.02c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC18A7.02c PE=3
SV=1
Length = 457
Score = 35.4 bits (80), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 106 VEAIILEVKERERIGGSFLKTD---LLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIK 162
VE +I KE ++G +F D +C + + C ++ +++ N + I+
Sbjct: 62 VEVLIFNWKEIRKLG-AFRSDDQFTYICDYDAVYTDHLCEADQLGLYL--WNSTSAKSIR 118
Query: 163 AFFQGTNEETQISEEVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPL 222
++ TN + Q + EI ++G Y ++ K + W+N G LP P
Sbjct: 119 SYIIPTNADPQ-NIIYEISQSGYYCIW----SHSKKMLPYQALVNWQNAYGGLPASQFPR 173
Query: 223 MTFYGLMSLAY-LVLGLAWFLRF 244
M G +++AY ++L L F RF
Sbjct: 174 MPISGGITIAYSVILALWMFFRF 196
>sp|Q91WD0|GP108_MOUSE Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1
Length = 569
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 25/238 (10%)
Query: 184 GMYYLYFMYCDPQLKG--------TMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLV 235
G Y L F C + G MI+ KNP+G+L PL Y +MS +L
Sbjct: 244 GQYSLNFHNCHNSIPGQEQPFDLTVMIRE----KNPEGFLSAAEIPLFKLYLIMSACFLA 299
Query: 236 LGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVT 295
+ W + + ++H+ + + + Y NS G G+ +
Sbjct: 300 ADIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYI 359
Query: 296 FTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFK----VIFLGLVYFVASEALEMFENLGN 351
+K + + + + G+ V+ L K VI L ++ VA +E E
Sbjct: 360 THLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREE--G 417
Query: 352 INDFS-GKAKLFFVLPVTVLDVCF-ILWIFSSL---SRTLEKLQMRRNLAKLELYRKF 404
+D+ K LF V + + F ++W L S T K+ + NLA+L+L+R +
Sbjct: 418 ASDYGLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAV--NLARLKLFRHY 473
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,439,277
Number of Sequences: 539616
Number of extensions: 6182043
Number of successful extensions: 17322
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 17300
Number of HSP's gapped (non-prelim): 28
length of query: 424
length of database: 191,569,459
effective HSP length: 120
effective length of query: 304
effective length of database: 126,815,539
effective search space: 38551923856
effective search space used: 38551923856
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)