BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014446
(424 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/412 (59%), Positives = 296/412 (71%), Gaps = 42/412 (10%)
Query: 35 IGDTSD-DRNNNHGMIDYMINNNPQPRPQIQQQVSS----SSSGFCTSNSFDKLSFADVM 89
+G++S + +N+ GMIDYM N N Q + + S SGF + FDK++F+DVM
Sbjct: 11 LGESSGGNDDNSSGMIDYMFNRNLQQQQKQSMPQQQQHQLSPSGFGAT-PFDKMNFSDVM 69
Query: 90 QFAEFGPKLSINQTNNRVNVPEEETGIIDPVYFLKFPVLNDKLDEDDEHSLMLP-----Q 144
QFA+FG KL++NQT N+ ++ETGI DPVYFLKFPVLNDK+++ ++ ++P Q
Sbjct: 70 QFADFGSKLALNQTRNQ---DDQETGI-DPVYFLKFPVLNDKIEDHNQTQHLMPSHQTSQ 125
Query: 145 PGG-CNEN--ESFKDNDEIRVSDNNSVQQQLRFL--EDDVQNNKSVVNNGPEAKNKRKRP 199
GG C N F + E + DN++ QLRF+ E++ + NK+V E K+KRKR
Sbjct: 126 EGGECGGNIGNVFLEEKEDQDDDNDNNSVQLRFIGGEEEDRENKNVTK--KEVKSKRKRA 183
Query: 200 RAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVR 259
R KT+EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVR
Sbjct: 184 RTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVR 243
Query: 260 ELEQLLQCLESQKRRRILGEAAAAPGGGRQM-------GDSSMAINQQPQTPLFPPPLPF 312
ELEQLLQCLESQKRRRILGE GR M + Q Q PL
Sbjct: 244 ELEQLLQCLESQKRRRILGET------GRDMTTTTTSSSSPITTVANQAQ------PLII 291
Query: 313 PNDQIKLMDFETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDL 372
+ +L + GLREETAENKSCLADVEVKLLG DAMIKILSRRRPGQLIK IAALEDL
Sbjct: 292 TGNVTEL-EGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDL 350
Query: 373 QFNILHTNITTIEQTVLYSFNVKVASETRFTADDIASSVQQVFSFIHANSSM 424
+ILHTNITT+EQTVLYSFNVK+ SETRFTA+DIASS+QQ+FSFIHAN+++
Sbjct: 351 HLSILHTNITTMEQTVLYSFNVKITSETRFTAEDIASSIQQIFSFIHANTNI 402
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 135/223 (60%), Gaps = 19/223 (8%)
Query: 203 KTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE 262
K EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP Y QRGDQASI+GGAI +++ELE
Sbjct: 115 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELE 174
Query: 263 QLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDF 322
LQ +E + A G G ++ A + P + F FP
Sbjct: 175 HHLQSMEPPVKT-----ATEDTGAGHDQTKTTSASSSGPFSDFF----AFP--------- 216
Query: 323 ETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNIT 382
+ R +A +A++EV ++ A +KIL+++RP QL+K +++++ L+ +LH N+T
Sbjct: 217 QYSNRPTSAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVT 276
Query: 383 TIEQTVLYSFNVKVASETRF-TADDIASSVQQVFSFIHANSSM 424
T + +VLYS +VKV ++ T +DIA++V Q+ I SS
Sbjct: 277 TRDDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRIEEESSF 319
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 133/217 (61%), Gaps = 22/217 (10%)
Query: 203 KTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE 262
K EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SY QRGDQASI+GGAI +V+ELE
Sbjct: 105 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELE 164
Query: 263 QLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDF 322
+LQ +E ++ R P G + S + P T F FP +
Sbjct: 165 HILQSMEPKRTR------THDPKGDKTSTSSLVG----PFTDFF----SFPQ-------Y 203
Query: 323 ETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNIT 382
T + E+ S A++EV + A IKI+++++P QL+K I +L+ L+ +LH N+T
Sbjct: 204 STKSSSDVPESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVT 263
Query: 383 TIEQTVLYSFNVKVASETRF-TADDIASSVQQVFSFI 418
T+ ++LYS +V+V ++ T DDIA+++ Q I
Sbjct: 264 TLHNSILYSISVRVEEGSQLNTVDDIATALNQTIRRI 300
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 129/203 (63%), Gaps = 11/203 (5%)
Query: 213 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 272
M+HIAVERNRR+QMNEHL+ LRSL P Y++RGDQASIIGG IEF++EL+QL+Q LES+K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 273 RRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDFETGLREETAE 332
RR+ L + P + + SS+ P +I+ + + +E A
Sbjct: 61 RRKTLNR-PSFPYDHQTIEPSSLG----------AATTRVPFSRIENVMTTSTFKEVGAC 109
Query: 333 NKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTIEQTVLYSF 392
S A+VE K+ G + +++++SRR GQL+K I+ LE L F +LH NI+++E+TVLY F
Sbjct: 110 CNSPHANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFF 169
Query: 393 NVKVASETRFTADDIASSVQQVF 415
VK+ E + +++ VQ+ F
Sbjct: 170 VVKIGLECHLSLEELTLEVQKSF 192
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 123/212 (58%), Gaps = 30/212 (14%)
Query: 206 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLL 265
EE+ESQRMTHIAVERNRR+QMN HL LRS++P SY+QRGDQASI+GGAI+FV+ LEQ L
Sbjct: 186 EEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQL 245
Query: 266 QCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDFETG 325
Q LE+QKR +Q D+ I P D
Sbjct: 246 QSLEAQKR-------------SQQSDDNKEQI---------------PEDNSLRNISSNK 277
Query: 326 LREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTIE 385
LR E +S +E ++ +KI R+ GQL+++I LE L+F +LH NIT+
Sbjct: 278 LRASNKEEQSSKLKIEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPT 337
Query: 386 QT-VLYSFNVKVASETRF-TADDIASSVQQVF 415
T V YSFN+K+ E +AD+I ++++Q+F
Sbjct: 338 NTSVSYSFNLKMEDECNLGSADEITAAIRQIF 369
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 129/221 (58%), Gaps = 19/221 (8%)
Query: 201 AIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRE 260
A K +EVE+QRMTHIAVERNRR+QMNEHL LRSLMP S++QRGDQASI+GGAI+F++E
Sbjct: 103 APKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKE 162
Query: 261 LEQLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLM 320
LEQLLQ LE++KR+ E P SS+A +
Sbjct: 163 LEQLLQSLEAEKRKDGTDE---TPKTASCSSSSSLACTNSSISS-------------VST 206
Query: 321 DFETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTN 380
E G + +VE ++ +K+ +R Q++KAI ++E+L+ ILH
Sbjct: 207 TSENGFTARFGGGDT--TEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLT 264
Query: 381 ITTIEQTVLYSFNVKVASETRF-TADDIASSVQQVFSFIHA 420
I++ V+YSFN+K+ + +AD+IA++V Q+F I+
Sbjct: 265 ISSSFDFVIYSFNLKMEDGCKLGSADEIATAVHQIFEQING 305
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 31/215 (14%)
Query: 203 KTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE 262
K EE+E+QR+ HIAVERNRR+QMNEH+ LR+L+P SY+QRGDQASI+GGAI +V+ LE
Sbjct: 168 KNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLE 227
Query: 263 QLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDF 322
Q++Q LESQKR + + + S ++ N D
Sbjct: 228 QIIQSLESQKRTQQQSNSEVVENALNHL--SGISSN----------------------DL 263
Query: 323 ETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNIT 382
T T E+++C+ +E ++ +K+ ++ GQL+K I +LE L+ +LH NIT
Sbjct: 264 WT-----TLEDQTCIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNIT 318
Query: 383 T-IEQTVLYSFNVKVASETRF-TADDIASSVQQVF 415
T +V YSFN+K+ E +AD+I ++V ++F
Sbjct: 319 TSSHSSVSYSFNLKMEDECDLESADEITAAVHRIF 353
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 129/231 (55%), Gaps = 24/231 (10%)
Query: 203 KTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE 262
K EE E+QRMTHIAVERNRR+QMN+HL VLRSLMP + +GDQASI+GGAI+F++ELE
Sbjct: 78 KNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELE 137
Query: 263 QLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDF 322
L LE+QK A +S N + + P P L Q L +
Sbjct: 138 HKLLSLEAQKHHN-------AKLNQSVTSSTSQDSNGEQENPHQPSSLSL--SQFFLHSY 188
Query: 323 ETGLRE---ETAENKSCLADVEVKLLGLDAMIKILSRRR-----------PGQLIKAIAA 368
+ T+ K+ + D+EV L+ A I+ILSRRR P QL K +A+
Sbjct: 189 DPSQENRNGSTSSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVAS 248
Query: 369 LEDLQFNILHTNITTIEQTVLYSFNVKVASETRFTA-DDIASSVQQVFSFI 418
L+ L +ILH ++TT++ +YS + KV + ++ DDIA +V + S I
Sbjct: 249 LQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSII 299
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2
SV=1
Length = 296
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 117/224 (52%), Gaps = 29/224 (12%)
Query: 203 KTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE 262
KT + E+QRM HIAVERNRRKQMN L +L+S+MP SY Q DQASII G I ++++LE
Sbjct: 92 KTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLE 151
Query: 263 QLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPN-----DQI 317
Q LQ LE+Q + + +NQ P +F FP
Sbjct: 152 QRLQSLEAQLK--------------------ATKLNQSPN--IFSDFFMFPQYSTATATA 189
Query: 318 KLMDFETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNIL 377
+ + +ADVEV ++ A IK+L++ +P L K I L + L
Sbjct: 190 TATASSSSSSHHHHKRLEVVADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTL 249
Query: 378 HTNITTIEQTVLYSFNVKVASETRFT--ADDIASSVQQVFSFIH 419
H N+TT + L++F+VKV ++ + T +++A++V +V +H
Sbjct: 250 HLNLTTSKDMSLFTFSVKVEADCQLTPSGNEVANTVHEVVRRVH 293
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 59/70 (84%)
Query: 211 QRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLES 270
Q+M+H+ VERNRRKQMNEHL VLRSLMP YV+RGDQASIIGG +E++ EL+Q+LQ LE+
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159
Query: 271 QKRRRILGEA 280
+K+R+ E
Sbjct: 160 KKQRKTYAEV 169
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 62/90 (68%)
Query: 326 LREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTIE 385
+ E A +KS LADVEVK G + ++K +S + PGQ++K IAALEDL IL NI T++
Sbjct: 274 INELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVD 333
Query: 386 QTVLYSFNVKVASETRFTADDIASSVQQVF 415
+T+L SF +K+ E + +A+++A +QQ F
Sbjct: 334 ETMLNSFTIKIGIECQLSAEELAQQIQQTF 363
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 56/239 (23%)
Query: 178 DVQNNKSVVNNGPEAKNKRKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLM 237
+ ++N+ VV PE K RKR R E + + H+ ER RR+++N+ LR+++
Sbjct: 386 EAESNRVVVE--PEKK-PRKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYSLRAVV 439
Query: 238 PGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAI 297
P V + D+AS++G AI ++ EL+ LQ ES K
Sbjct: 440 PN--VSKMDKASLLGDAISYISELKSKLQKAESDKEEL---------------------- 475
Query: 298 NQQPQTPLFPPPLPFPNDQIKLMDFETGLREETAENKSCL---------ADVEVKLLGLD 348
QI +M+ E G + + +++ CL +V+VK++G D
Sbjct: 476 ----------------QKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWD 519
Query: 349 AMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTIEQTVLYSFNVKVASETRFTADDI 407
AMI+I +R K + AL++L + H +++ + ++ VK+ ++ FT D +
Sbjct: 520 AMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQF-FTQDQL 577
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 53/224 (23%)
Query: 184 SVVNNGPEAKNKRKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQ 243
SVV K +KR R E + + H+ ER RR+++N+ LR+++P V
Sbjct: 425 SVVKEVAVEKRPKKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYALRAVVPN--VS 479
Query: 244 RGDQASIIGGAIEFVRELEQLLQCLESQK----------RRRILGEAAAAPGGGRQMGDS 293
+ D+AS++G AI ++ EL+ + ES+K + + G A+A GG M S
Sbjct: 480 KMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGG--DMSSS 537
Query: 294 SMAINQQPQTPLFPPPLPFPNDQIKLMDFETGLREETAENKSCLADVEVKLLGLDAMIKI 353
+I K ++EVK++G DAMI++
Sbjct: 538 CSSI------------------------------------KPVGMEIEVKIIGWDAMIRV 561
Query: 354 LSRRRPGQLIKAIAALEDLQFNILHTNITTIEQTVLYSFNVKVA 397
S +R + ++AL DL+ + H +++ + ++ VK+
Sbjct: 562 ESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMG 605
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 274
HI ER RR+++ + L +L+PG +++ D+AS++G A++ ++ L++ + LE QK+
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPG--LKKMDKASVLGDALKHIKYLQERVGELEEQKKE 210
Query: 275 RILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDFETGLREETAENK 334
R L + D++ + + + D +D
Sbjct: 211 RRLESMVLVKKSKLILDDNNQSFSSSCE------------DGFSDLD------------- 245
Query: 335 SCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTIEQTVLYSFNV 394
L ++EV+ D +IKIL ++ G L K +A +E L I ++++ T+ +
Sbjct: 246 --LPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPTLDITIIA 303
Query: 395 KVASETRFTADDIASSVQQVFS 416
K S+ T D+ S++ S
Sbjct: 304 KKESDFDMTLMDVVKSLRSALS 325
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 190 PEAKNKRKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQAS 249
P K RKR R E + + H+ ER RR+++N+ LR+++P V + D+AS
Sbjct: 394 PPEKKPRKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYSLRAVVPN--VSKMDKAS 448
Query: 250 IIGGAIEFVRELEQLLQCLESQK---RRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLF 306
++G AI ++ EL+ LQ ES K ++++ G + G G S A ++
Sbjct: 449 LLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNG---KGCGSRAKERKSSN--- 502
Query: 307 PPPLPFPNDQIKLMDFETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAI 366
++ TA S +++VK++G D MI++ ++ + +
Sbjct: 503 --------------------QDSTA--SSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFM 540
Query: 367 AALEDLQFNILHTNITTIEQTVLYSFNVKVASE 399
AL++L + H +++ + ++ VK+ S+
Sbjct: 541 EALKELDLEVNHASLSVVNDLMIQQATVKMGSQ 573
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 35/192 (18%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 274
++ ER RRK++N+ L +LRS++P + + D+ASI+G AI++++EL Q + L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELE- 364
Query: 275 RILGEAAAAPGGGRQMGDSSMAINQQPQT-------PLFPPPLPFPNDQIKLMDFETGLR 327
+ PG S + PQT L P LP P Q + E LR
Sbjct: 365 ------STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARV--EVRLR 416
Query: 328 EETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTIEQT 387
E A N I + RRPG L+ + AL++L ++ I+
Sbjct: 417 EGRAVN-----------------IHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGF 459
Query: 388 VLYSFNVKVASE 399
L F + E
Sbjct: 460 ALDVFRAEQCQE 471
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 57/298 (19%)
Query: 118 DPVYFLKFPVLNDKLDEDDEHSLMLPQPGGCNENESFKDNDEIRVSDNNSVQQQLRFLED 177
DP++ L FP+ QP N SF D+ D Q + + D
Sbjct: 160 DPLFHLNFPL----------------QP----PNGSFMGVDQ----DQTETNQGVNLMYD 195
Query: 178 DVQNNKSVVNNGPEAKNKRKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLM 237
+ NN +++G K + + R I TE R RR + L++L+
Sbjct: 196 EENNN---LDDGLNRKGRGSKKRKIFPTE-------------RERRVHFKDRFGDLKNLI 239
Query: 238 PGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAI 297
P + D+ASI+G AI++++EL L + ++L E R+ GD +
Sbjct: 240 PNP--TKNDRASIVGEAIDYIKEL------LRTIDEFKLLVEKKRVKQRNRE-GDDVVDE 290
Query: 298 NQQPQTPLFPPPLPFPNDQIKLMDFETGLREETAENKSCLADVEVKLLGLDAMIKILSRR 357
N + Q+ + +Q + LR + KS DV+V+++ + IKI+ ++
Sbjct: 291 NFKAQSEVV--------EQCLINKKNNALRCSWLKRKSKFTDVDVRIIDDEVTIKIVQKK 342
Query: 358 RPGQLIKAIAALEDLQFNILHTNITTIEQTVLYSFNVKVASETRFTADDIASSVQQVF 415
+ L+ ++ L+ ++ H I + + FN K++ + A IA V +V
Sbjct: 343 KINCLLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKISEGSSVYASAIADRVMEVL 400
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 274
++ ER RRK++N+ L LRSL+P + + D+ASI+G AI +V+EL+ + L+ +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVP--RITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 275 RILGEAAA-APGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDFETGLREETAEN 333
E + P GG M++N T F P L N + + + L +
Sbjct: 373 NSETEDGSNRPQGG-------MSLNGTVVTG-FHPGLSC-NSNVPSVKQDVDLENSNDKG 423
Query: 334 KSCLADVEV-KLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTIEQTVLYSF 392
+ V+V +L G + +K++ +PG + + AL+ L + + N T V F
Sbjct: 424 QEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVF 483
Query: 393 NVKVASETRFTADDIASSVQQV 414
V+ A+ + +S+ ++
Sbjct: 484 KVEKNDNEMVQAEHVRNSLLEI 505
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 218 VERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQ----------C 267
ER RR N+ L++L+P + D+ASI+G AI++++EL + ++ C
Sbjct: 251 TERERRVHFNDRFFDLKNLIPNP--TKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRC 308
Query: 268 --LESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKL-MDFET 324
S+KR R+ + +N +PQ+ + DQ +
Sbjct: 309 GRFRSKKRARVGEGGGGE-----DQEEEEDTVNYKPQSEV---------DQSCFNKNNNN 354
Query: 325 GLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTI 384
LR + KS + +V+V+++ + IK++ +++ L+ L+ LQ ++ H I
Sbjct: 355 SLRCSWLKRKSKVTEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQI 414
Query: 385 EQTVLYSFNVKVASETRFTADDIASSVQQV 414
+ + FN K+ + A IA ++ +V
Sbjct: 415 GEHYSFLFNTKICEGSCVYASGIADTLMEV 444
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 274
++ ER RRK++N+ L +LRS++P + + D+ASI+G AI++++EL Q + L ++
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 275 RILGEAAAAPGGGRQMGDSSMAINQQPQTPLFP-PPLPFPNDQIKLMDFETGLREETAEN 333
++ P + + ++ + + L P LP P Q + E LRE A N
Sbjct: 326 TPPSSSSLHP-----LTPTPQTLSYRVKEELCPSSSLPSPKGQQPRV--EVRLREGKAVN 378
Query: 334 KSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTIEQTVLYSFN 393
I + RRPG L+ + AL++L ++ I+ L F
Sbjct: 379 -----------------IHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFR 421
Query: 394 VKVASE 399
+ E
Sbjct: 422 AEQCQE 427
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 191 EAKNKRKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASI 250
E+ N R R R + ++ + H+ ER RR+++N+ LRS++P + + D+AS+
Sbjct: 411 ESGNNRPRKRGRRPANG-RAEALNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASL 467
Query: 251 IGGAIEFVRELEQLLQCLESQKRRRILGEAAAAP 284
+G A+ ++ EL L+ +E+++ R LG ++ P
Sbjct: 468 LGDAVSYINELHAKLKVMEAERER--LGYSSNPP 499
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 274
+I ERNRR+++N+ L LRS++P + + D+ASII AI ++ L+ + LE++ R
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIR- 112
Query: 275 RILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDFETGLREETAENK 334
E + P SS++ ++ F L P K+ ++G E
Sbjct: 113 ----ELESTPK-------SSLSFSKD-----FDRDLLVPVTSKKMKQLDSGSSTSLIE-- 154
Query: 335 SCLADVEVKLLGLDAM-IKILSRRRPGQLIKAIAALEDLQFNILHTNITTIEQTVLYSFN 393
+ +++V +G M + + +R ++K E L IL +N+T+ + ++
Sbjct: 155 --VLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVF 212
Query: 394 VKVASE 399
++ E
Sbjct: 213 IEADEE 218
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 26/212 (12%)
Query: 216 IAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRR 275
ER RR +NE L+ L+P +GD+ASI+ I+++ EL + + L+ R+
Sbjct: 216 FTTERERRCHLNERYEALKLLIPSP--SKGDRASILQDGIDYINELRRRVSELKYLVERK 273
Query: 276 ILG-------------EAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDF 322
G G D + ++P++ D I
Sbjct: 274 RCGGRHKNNEVDDNNNNKNLDDHGNEDDDDDDENMEKKPES-----------DVIDQCSS 322
Query: 323 ETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNIT 382
LR + KS + +V+V+++ + IK++ +++ L+ L+ LQ ++ H
Sbjct: 323 NNSLRCSWLQRKSKVTEVDVRIVDDEVTIKVVQKKKINCLLLVSKVLDQLQLDLHHVAGG 382
Query: 383 TIEQTVLYSFNVKVASETRFTADDIASSVQQV 414
I + + FN K+ + A IA+ V +V
Sbjct: 383 QIGEHYSFLFNTKIYEGSTIYASAIANRVIEV 414
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 195 KRKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGA 254
KR R R K E + + H+ ER RR+++N+ LRS++P + + D+AS++G A
Sbjct: 377 KRPRKRGRKPANGRE-EPLNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDA 433
Query: 255 IEFVRELEQLLQCLESQK 272
I +++EL++ ++ +E ++
Sbjct: 434 ISYIKELQEKVKIMEDER 451
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 193 KNKRKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIG 252
K K++ R K EE HI ER RRK+M + L +L+P + D+++I+
Sbjct: 52 KGKKRTKRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLP-QLPPKADKSTIVD 110
Query: 253 GAIEFVRELEQLLQCLESQKRRRILGEAAA 282
A+ ++ LEQ LQ LE QK ++ +A+
Sbjct: 111 EAVSSIKSLEQTLQKLEMQKLEKLQYSSAS 140
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 29/195 (14%)
Query: 190 PEAKNKRKRPRAIKTTEEV---ESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGD 246
PE K R K + + +S HI ER RR+++ + L +L+PG +++ D
Sbjct: 99 PEHKKAELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPG--LKKMD 156
Query: 247 QASIIGGAIEFVRELEQLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLF 306
+AS++G AI+ ++ L++ ++ E QK+ + + + + N QP +
Sbjct: 157 KASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDE-----NHQPSS--- 208
Query: 307 PPPLPFPNDQIKLMDFETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAI 366
+ + S L ++EV++ G D +IKIL ++ G +IK +
Sbjct: 209 ----------------SSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIM 252
Query: 367 AALEDLQFNILHTNI 381
+E L +I ++N+
Sbjct: 253 GEIEKLGLSITNSNV 267
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 16/173 (9%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 274
++ ERNRR+++N+ L LRS++P + + D+AS+I +I++++EL + LE++ R
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPN--ISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 275 RILGEAAAAPGGGRQMGDSSMAINQQPQTPL--FPPPLPFPNDQIKLMDFETGLREETAE 332
L + + D + A +T L F + + K MD+ T ++ E
Sbjct: 113 --LESRSTLLENPVRDYDCNFA-----ETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIE 165
Query: 333 NKSCLADVEVKLLG-LDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTI 384
+ +++V +G ++ I ++ +++ LE L NIL TN ++
Sbjct: 166 ----VLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSF 214
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 91/202 (45%), Gaps = 39/202 (19%)
Query: 194 NKRKRPRAIKTTEEVESQR-------MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGD 246
++RKR R ++TT + + ++H+ E+ RR+++N LR+++P V R D
Sbjct: 222 SERKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPK--VSRMD 279
Query: 247 QASIIGGAIEFVRELEQLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMA--INQQPQTP 304
+AS++ A+ ++ L+ + LE++ ++ + E SS+ +NQ+P
Sbjct: 280 KASLLSDAVSYIESLKSKIDDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKP--- 336
Query: 305 LFPPPLPFPNDQIKLMDFETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIK 364
+ N+ +V+VK++G +A+I++ +
Sbjct: 337 -------------------------SKSNRGSDLEVQVKIVGEEAIIRVQTENVNHPTSA 371
Query: 365 AIAALEDLQFNILHTNITTIEQ 386
++AL ++ + H N + + Q
Sbjct: 372 LMSALMEMDCRVQHANASRLSQ 393
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 33/180 (18%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 274
H+ ER RR++++E L +L+PG +++ D+ +I+ AI +++L++ L+ L+ +K
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPG--LKKADKVTILDDAISRMKQLQEQLRTLKEEK-- 175
Query: 275 RILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDFETGLREETAENK 334
EA + S + +++P P + DQ
Sbjct: 176 ----EATRQMESMILVKKSKVFFDEEPNLSC-SPSVHIEFDQ------------------ 212
Query: 335 SCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNI-----TTIEQTVL 389
L ++E K+ D +I+IL + G +I + +E+ Q I ++ + +T++ TVL
Sbjct: 213 -ALPEIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVL 271
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 272
H+ ER RR+++NE VL+SL+P + R ++ASI+ I +++EL++ +Q LES +
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLPS--IHRVNKASILAETIAYLKELQRRVQELESSR 472
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 272
H+ ER RR+++NE VL+SL+P + R ++ASI+ I +++EL++ +Q LES +
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLPS--IHRVNKASILAETIAYLKELQRRVQELESSR 474
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 205 TEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQL 264
T + ++ R + ER RR +M + L LRSL+P + + D+ASI+G A+ +V+EL+
Sbjct: 122 TRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPN--ITKMDKASIVGDAVLYVQELQSQ 179
Query: 265 LQCLESQKRRRILG-EAAAAPGGGRQ 289
+ L+S I G EA+ GG Q
Sbjct: 180 AKKLKSD----IAGLEASLNSTGGYQ 201
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 17/90 (18%)
Query: 183 KSVVNNGPEAKNKRKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYV 242
K VNNG R+ P +K H+ ER RR+++NE L L +L+PG +
Sbjct: 116 KDCVNNGG-----RREPHLLKE----------HVLAERKRRQKLNERLIALSALLPG--L 158
Query: 243 QRGDQASIIGGAIEFVRELEQLLQCLESQK 272
++ D+A+++ AI+ +++L++ ++ LE ++
Sbjct: 159 KKTDKATVLEDAIKHLKQLQERVKKLEEER 188
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 213 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLE 269
++H+ ER RR+++NE LRS++P +V + D+ SI+G I +V L + + LE
Sbjct: 362 LSHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>sp|P17106|CBF1_YEAST Centromere-binding protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CBF1 PE=1 SV=2
Length = 351
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 197 KRPRAIKTTEEVESQRM-THIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAI 255
++P + TT+E + QR +H VER RR+ +N + VL L+P V+ +A+I+ A
Sbjct: 208 RKPTTLATTDEWKKQRKDSHKEVERRRRENINTAINVLSDLLP---VRESSKAAILACAA 264
Query: 256 EFVRELEQLLQC-LESQKRRRILGEAAAA 283
E++++L++ + +E +++L E A+
Sbjct: 265 EYIQKLKETDEANIEKWTLQKLLSEQNAS 293
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 206 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQ 263
E+ ES +H E+ RR ++N HL LR L+P S + D+A+++ IE V+EL+Q
Sbjct: 58 EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNS--DKLDKAALLATVIEQVKELKQ 113
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 196 RKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAI 255
RKR R E + + H+ ER RR+++N+ LR+++P + + D+AS++ AI
Sbjct: 305 RKRGRKPANGRE---EALNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLADAI 359
Query: 256 EFVRELEQLLQCLESQKR 273
++ ++++ ++ E++K+
Sbjct: 360 TYITDMQKKIRVYETEKQ 377
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLES 270
H +E+ RR+++NE LR ++P + + D+ SI+ IE+++ELE+ +Q LES
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPS--INKIDKVSILDDTIEYLQELERRVQELES 495
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 57/197 (28%)
Query: 213 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 272
+ H+ ER RR+++N LR+++P V + D+ S++ A+ ++ EL+ + +E +K
Sbjct: 342 LNHVEAERMRREKLNHRFYALRAVVPN--VSKMDKTSLLEDAVCYINELKSKAENVELEK 399
Query: 273 R---------RRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIKLMDFE 323
+ I G+ A P + +E
Sbjct: 400 HAIEIQFNELKEIAGQRNAIP---------------------------------SVCKYE 426
Query: 324 TGLREETAENKSCLADVEVKLL-GLDAMIKILSRR--RPGQLIKAIAALEDLQFNILHTN 380
E S + +EVK++ DAM+++ SR+ PG + + AL DL+ + H +
Sbjct: 427 --------EKASEMMKIEVKIMESDDAMVRVESRKDHHPGA--RLMNALMDLELEVNHAS 476
Query: 381 ITTIEQTVLYSFNVKVA 397
I+ + ++ NVK+
Sbjct: 477 ISVMNDLMIQQANVKMG 493
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 274
H E+ RR+++NE LRS++P + + D+ SI+ IE++++L++ +Q LES
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPS--ISKIDKVSILDDTIEYLQDLQKRVQELES---- 459
Query: 275 RILGEAAAAPGGGRQMGDS----SMAINQQPQTPLFPPPLPFPNDQIKLMDFETGLREET 330
R+ D+ +M ++P N + K D G E
Sbjct: 460 ------------CRESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPA 507
Query: 331 AENKSCLAD-VEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQFNILHTNITTIEQTVL 389
+ L D + + LG + +I++ R G L++ + + DL + +T + +
Sbjct: 508 DIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLC 567
Query: 390 YSFNVKVASETRFTADDIASSVQQV 414
+ N K T I ++Q+V
Sbjct: 568 LTVNCKHKGTKIATTGMIQEALQRV 592
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 189 GPEAKNKRKRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQA 248
GP + R K ++ + R H E+ RR ++NE ++LR L+P S +R D A
Sbjct: 24 GPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKR-DTA 82
Query: 249 SIIGGAIEFVRELEQLLQCLE 269
S + I++V+ L++ +Q E
Sbjct: 83 SFLLEVIDYVQYLQEKVQKYE 103
>sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125
PE=2 SV=1
Length = 259
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 95/189 (50%), Gaps = 14/189 (7%)
Query: 201 AIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQ-RGDQASIIGGAIEFVR 259
A K ++ ES++M H +ER RR++++ + LR+L+P Y+Q + + I A+ +++
Sbjct: 64 ANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIK 123
Query: 260 ELEQLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFPNDQIK- 318
+L+ ++ L ++KR R+ +A + + + +++ + L + I
Sbjct: 124 DLQIKIKEL-NEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITV 182
Query: 319 -----LMDFETGLREETAENKSCLADVEVKLLGLD---AMIKILSRRRPGQLIKAIAA-L 369
L+ E + NKSCL+ V +++L + +++ LS RR + + I + +
Sbjct: 183 VVTPCLVGVEIIISCCLGRNKSCLSSV-LQMLAQEQRFSVVSCLSARRQQRFMHTIVSQV 241
Query: 370 ED-LQFNIL 377
ED Q NIL
Sbjct: 242 EDGKQINIL 250
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 198 RPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEF 257
+P++ ++EV +++ H ER RR ++N LR+++P Q D+AS++G + +
Sbjct: 81 KPKSKTESKEVAAKK--HSDAERRRRLRINSQFATLRTILPNLVKQ--DKASVLGETVRY 136
Query: 258 VRELEQLLQ 266
EL++++Q
Sbjct: 137 FNELKKMVQ 145
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 214 THIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCL 268
+H ER RR+++NE L+ L+ L+PG Y G A ++ I++VR L+ ++ L
Sbjct: 114 SHSLAERVRREKINERLKCLQDLVPGCYKAMG-MAVMLDVIIDYVRSLQNQIEFL 167
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 215 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCL 268
H E+ RR ++NE ++ L+ L+P S + D+AS++ AIE++++L+ +Q L
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNS--NKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 214 THIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCL 268
H E+ RR ++NE ++ L+SL+P S + D+AS++ AIE++++L+ +Q L
Sbjct: 201 VHNLSEKRRRSRINEKMKALQSLIPNS--NKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 197 KRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE 256
+R + K EE E+ + ++ ER RR++++ L LRS +P V +ASI+ AI
Sbjct: 15 RRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVP--IVTNMTKASIVEDAIT 72
Query: 257 FVRELEQLLQCLESQKRRRILGEAAAAPGGGRQMGDSSMAINQQPQTPLFPPPLPFP--N 314
++ EL+ ++ L E AP I+++ P+ P + N
Sbjct: 73 YIGELQNNVKNL-----LETFHEMEEAPP----------EIDEEQTDPMIKPEVETSDLN 117
Query: 315 DQIKLMDFETGLREETAENKSCLADVEVKLLGLDAMIKILSRRRPGQLIKAIAALEDLQF 374
+++K + E EN E K +KI++ +R G K + + L F
Sbjct: 118 EEMKKLGIE--------ENVQLCKIGERKFW-----LKIITEKRDGIFTKFMEVMRFLGF 164
Query: 375 NILHTNITTIEQTVLYSFNVK 395
I+ ++TT +L S +V+
Sbjct: 165 EIIDISLTTSNGAILISASVQ 185
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 39.7 bits (91), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 165 NNSVQQQLRFLEDDVQNNKSVVNNGPEAKNKRKRPRAIKTTEEVESQRMTHIAVERNRRK 224
NN + +E D + SV G E K+ + ++E Q ++ ER RRK
Sbjct: 137 NNPMSYPSPLMESDQSKSFSVGYCGGETNKKKSK--------KLEGQPSKNLMAERRRRK 188
Query: 225 QMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVREL 261
++N+ L +LRS++P + + D+ SI+G AI++++EL
Sbjct: 189 RLNDRLSMLRSIVPK--ISKMDRTSILGDAIDYMKEL 223
>sp|Q10186|YAWC_SCHPO Uncharacterized bHLH domain-containing protein C3F10.12c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3F10.12c PE=4 SV=1
Length = 201
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 162 VSDNNSVQQQLRFLEDDVQNNKSVVNNGPEAKNKRKRPRAIKTTEEVESQRMTHIAVERN 221
VS N +++ F + + + S + + N + + E +++R++H VER
Sbjct: 40 VSYNPYPSEKIDFPKKNTAHKNSTTSTVASSGNTTMEKPCVGSEEWYKAKRLSHKEVERR 99
Query: 222 RRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQL 264
RR+ ++E ++ L +++PG +G SI+ +++R L+++
Sbjct: 100 RREAISEGIKELANIVPGCEKNKG---SILQRTAQYIRSLKEM 139
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 38.9 bits (89), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 197 KRPRAIKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE 256
K+ R T+ + H ER RR ++NE ++ L+ L+P + D+AS++ AIE
Sbjct: 271 KQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIP--RCNKSDKASMLDEAIE 328
Query: 257 FVRELEQLLQCL 268
+++ L+ +Q +
Sbjct: 329 YMKSLQLQIQMM 340
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 38.5 bits (88), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 214 THIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCL 268
+H ER RR ++NE LR L+ ++PG Y G A+++ I +V+ L+ ++ L
Sbjct: 155 SHSLAERVRRGKINERLRCLQDMVPGCYKAMG-MATMLDEIINYVQSLQNQVEFL 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,387,346
Number of Sequences: 539616
Number of extensions: 7061689
Number of successful extensions: 28596
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 28075
Number of HSP's gapped (non-prelim): 632
length of query: 424
length of database: 191,569,459
effective HSP length: 120
effective length of query: 304
effective length of database: 126,815,539
effective search space: 38551923856
effective search space used: 38551923856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)