Query 014449
Match_columns 424
No_of_seqs 129 out of 1542
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 05:14:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014449.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014449hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 5.1E-58 1.1E-62 455.9 46.1 384 34-417 93-476 (478)
2 PLN02693 IAA-amino acid hydrol 100.0 2.1E-57 4.5E-62 449.1 47.7 390 27-419 34-425 (437)
3 PRK06915 acetylornithine deace 100.0 3.2E-54 6.9E-59 428.6 40.4 376 23-418 2-421 (422)
4 PRK08588 succinyl-diaminopimel 100.0 8.7E-54 1.9E-58 419.6 39.3 357 38-416 2-377 (377)
5 PRK06133 glutamate carboxypept 100.0 2.3E-52 4.9E-57 412.8 42.4 370 24-418 23-410 (410)
6 PRK13013 succinyl-diaminopimel 100.0 1.8E-52 3.9E-57 417.0 40.2 369 27-417 3-424 (427)
7 PRK07338 hypothetical protein; 100.0 5.2E-52 1.1E-56 410.3 39.9 366 25-418 4-401 (402)
8 PRK06837 acetylornithine deace 100.0 8.6E-52 1.9E-56 411.0 40.3 374 21-417 3-424 (427)
9 TIGR01891 amidohydrolases amid 100.0 1.4E-51 3E-56 401.5 40.8 356 41-400 2-360 (363)
10 COG1473 AbgB Metal-dependent a 100.0 5.3E-50 1.1E-54 383.9 44.2 383 29-417 4-391 (392)
11 PRK13004 peptidase; Reviewed 100.0 3.3E-51 7.1E-56 403.8 36.9 371 26-417 3-398 (399)
12 PRK08596 acetylornithine deace 100.0 1.1E-50 2.4E-55 402.3 38.8 372 28-419 3-420 (421)
13 PRK13983 diaminopimelate amino 100.0 6.1E-51 1.3E-55 402.9 35.4 363 35-413 2-399 (400)
14 PRK13009 succinyl-diaminopimel 100.0 2E-50 4.4E-55 395.7 38.5 355 39-415 3-374 (375)
15 TIGR03320 ygeY M20/DapE family 100.0 9.4E-51 2E-55 400.2 35.6 369 27-416 2-395 (395)
16 TIGR03526 selenium_YgeY putati 100.0 1.4E-50 3E-55 398.7 36.0 369 27-416 2-395 (395)
17 TIGR01910 DapE-ArgE acetylorni 100.0 4.8E-51 1E-55 399.8 29.2 345 42-406 2-375 (375)
18 TIGR01246 dapE_proteo succinyl 100.0 1.3E-49 2.8E-54 389.1 35.7 352 41-414 2-370 (370)
19 PRK08201 hypothetical protein; 100.0 1.4E-49 3.1E-54 398.5 36.8 373 26-415 2-454 (456)
20 PRK07522 acetylornithine deace 100.0 1.4E-49 3.1E-54 391.0 35.3 349 38-415 4-384 (385)
21 PRK08651 succinyl-diaminopimel 100.0 1.6E-49 3.5E-54 391.8 35.0 357 34-416 2-392 (394)
22 PRK05111 acetylornithine deace 100.0 3.4E-49 7.4E-54 388.0 37.1 348 38-416 5-382 (383)
23 TIGR01880 Ac-peptdase-euk N-ac 100.0 3.6E-49 7.8E-54 389.7 37.2 361 37-415 8-398 (400)
24 PRK09133 hypothetical protein; 100.0 2.8E-49 6E-54 397.9 35.8 360 37-416 36-470 (472)
25 PRK06446 hypothetical protein; 100.0 2.3E-49 5E-54 394.4 34.6 361 38-415 2-434 (436)
26 PRK07473 carboxypeptidase; Pro 100.0 3.4E-48 7.5E-53 378.3 39.1 346 37-413 10-374 (376)
27 TIGR01892 AcOrn-deacetyl acety 100.0 5.7E-49 1.2E-53 384.0 33.2 338 42-410 1-363 (364)
28 PRK00466 acetyl-lysine deacety 100.0 1.6E-48 3.5E-53 377.6 35.9 330 37-417 9-345 (346)
29 PRK08652 acetylornithine deace 100.0 2.4E-48 5.1E-53 377.2 34.6 338 38-416 2-346 (347)
30 PRK07907 hypothetical protein; 100.0 1.1E-47 2.4E-52 384.0 38.7 369 26-415 6-447 (449)
31 PRK08262 hypothetical protein; 100.0 1.4E-48 3.1E-53 394.2 32.0 382 22-416 28-485 (486)
32 PRK09104 hypothetical protein; 100.0 1.3E-47 2.7E-52 385.1 38.3 375 26-416 5-463 (464)
33 PRK04443 acetyl-lysine deacety 100.0 2.9E-47 6.3E-52 368.9 35.3 332 37-413 5-347 (348)
34 PRK13007 succinyl-diaminopimel 100.0 8.7E-47 1.9E-51 366.8 35.2 335 36-411 5-351 (352)
35 PRK08737 acetylornithine deace 100.0 8.8E-47 1.9E-51 366.3 34.7 335 36-412 4-362 (364)
36 TIGR01900 dapE-gram_pos succin 100.0 1.2E-46 2.7E-51 367.2 34.8 331 43-396 1-373 (373)
37 PRK07906 hypothetical protein; 100.0 9.7E-47 2.1E-51 375.2 34.5 358 40-413 1-425 (426)
38 TIGR01886 dipeptidase dipeptid 100.0 1.6E-46 3.4E-51 375.8 36.1 358 29-416 4-466 (466)
39 TIGR01883 PepT-like peptidase 100.0 1.2E-46 2.7E-51 366.9 33.6 341 39-411 1-360 (361)
40 PRK07079 hypothetical protein; 100.0 3E-46 6.5E-51 375.4 36.7 372 26-417 7-457 (469)
41 COG0624 ArgE Acetylornithine d 100.0 2.4E-45 5.3E-50 363.4 38.4 371 30-416 5-408 (409)
42 PRK13381 peptidase T; Provisio 100.0 1.4E-45 3.1E-50 364.2 35.0 348 39-415 2-403 (404)
43 PRK07318 dipeptidase PepV; Rev 100.0 9.6E-46 2.1E-50 371.2 32.1 360 28-416 4-466 (466)
44 PRK12892 allantoate amidohydro 100.0 6.2E-45 1.3E-49 361.0 37.2 347 37-416 9-411 (412)
45 TIGR01902 dapE-lys-deAc N-acet 100.0 4.1E-45 8.9E-50 352.5 31.9 328 42-417 1-336 (336)
46 PRK06156 hypothetical protein; 100.0 1.8E-44 3.9E-49 365.4 37.7 371 22-416 30-516 (520)
47 PRK12893 allantoate amidohydro 100.0 2.6E-44 5.6E-49 356.5 37.6 348 37-417 9-411 (412)
48 PRK07205 hypothetical protein; 100.0 3.9E-44 8.5E-49 357.9 36.1 358 34-417 7-444 (444)
49 PRK05469 peptidase T; Provisio 100.0 3.6E-44 7.9E-49 354.6 35.1 353 38-417 2-407 (408)
50 PRK09290 allantoate amidohydro 100.0 1E-43 2.2E-48 351.8 37.5 347 37-417 6-412 (413)
51 PRK12891 allantoate amidohydro 100.0 2.5E-43 5.4E-48 348.8 38.3 348 38-418 10-412 (414)
52 TIGR01882 peptidase-T peptidas 100.0 7E-44 1.5E-48 352.1 31.8 352 38-415 3-407 (410)
53 PRK12890 allantoate amidohydro 100.0 2.6E-42 5.6E-47 342.1 38.3 345 38-415 9-411 (414)
54 TIGR01879 hydantase amidase, h 100.0 1.2E-41 2.6E-46 335.6 36.0 341 40-414 3-401 (401)
55 TIGR01893 aa-his-dipept aminoa 100.0 1.2E-40 2.5E-45 335.2 35.5 346 38-414 4-476 (477)
56 TIGR03176 AllC allantoate amid 100.0 4.8E-40 1E-44 323.5 38.5 346 38-416 3-404 (406)
57 TIGR01887 dipeptidaselike dipe 100.0 8.4E-41 1.8E-45 332.0 33.0 345 38-411 2-447 (447)
58 PRK13799 unknown domain/N-carb 100.0 1.8E-39 3.8E-44 331.9 38.9 349 37-416 180-590 (591)
59 PRK15026 aminoacyl-histidine d 100.0 1.5E-39 3.3E-44 324.5 34.6 342 37-414 9-482 (485)
60 PRK08554 peptidase; Reviewed 100.0 8.1E-40 1.8E-44 324.4 30.7 355 39-415 2-437 (438)
61 PRK13590 putative bifunctional 100.0 1.1E-38 2.4E-43 326.3 38.9 346 38-417 181-589 (591)
62 KOG2275 Aminoacylase ACY1 and 100.0 5.4E-39 1.2E-43 298.0 32.2 364 37-415 24-418 (420)
63 KOG2276 Metalloexopeptidases [ 100.0 2E-37 4.3E-42 284.4 30.3 377 27-416 5-472 (473)
64 COG2195 PepD Di- and tripeptid 99.9 3.6E-25 7.8E-30 212.6 20.5 350 37-414 4-411 (414)
65 PF01546 Peptidase_M20: Peptid 99.9 1.8E-21 3.8E-26 172.1 10.7 173 97-412 1-188 (189)
66 COG4187 RocB Arginine degradat 99.8 6.7E-17 1.4E-21 151.0 19.4 254 37-302 7-324 (553)
67 TIGR03106 trio_M42_hydro hydro 99.7 3.6E-16 7.8E-21 149.3 23.1 243 37-411 2-339 (343)
68 PRK09961 exoaminopeptidase; Pr 99.7 1.6E-16 3.5E-21 152.1 19.3 249 41-414 3-333 (344)
69 COG1363 FrvX Cellulase M and r 99.7 9.1E-16 2E-20 144.5 22.9 255 38-418 2-350 (355)
70 TIGR03107 glu_aminopep glutamy 99.7 2.4E-15 5.2E-20 143.6 21.8 243 42-414 2-341 (350)
71 PF07687 M20_dimer: Peptidase 99.7 2E-16 4.4E-21 127.1 12.3 104 203-306 2-110 (111)
72 PRK09864 putative peptidase; P 99.7 1.5E-14 3.2E-19 137.8 23.5 247 41-414 3-341 (356)
73 PRK10199 alkaline phosphatase 99.6 3.6E-14 7.8E-19 133.6 16.6 129 41-174 38-189 (346)
74 PF05343 Peptidase_M42: M42 gl 98.7 4.9E-07 1.1E-11 84.7 14.6 70 327-406 220-292 (292)
75 KOG2194 Aminopeptidases of the 98.3 9.9E-06 2.2E-10 83.7 12.6 134 37-185 56-223 (834)
76 PF04389 Peptidase_M28: Peptid 98.0 1.2E-05 2.5E-10 70.2 7.1 80 95-185 2-87 (179)
77 KOG2526 Predicted aminopeptida 96.4 0.083 1.8E-06 50.8 13.1 113 62-185 165-303 (555)
78 KOG3946 Glutaminyl cyclase [Po 95.9 0.1 2.3E-06 47.4 10.8 107 57-173 71-200 (338)
79 COG2234 Iap Predicted aminopep 95.3 0.083 1.8E-06 52.9 8.9 44 130-175 231-275 (435)
80 PRK00913 multifunctional amino 94.6 0.96 2.1E-05 45.5 14.2 121 38-162 171-309 (483)
81 PF00883 Peptidase_M17: Cytoso 94.4 0.69 1.5E-05 43.5 11.9 115 41-162 1-140 (311)
82 KOG2195 Transferrin receptor a 94.1 0.2 4.3E-06 52.5 8.2 78 81-174 338-421 (702)
83 PF05450 Nicastrin: Nicastrin; 93.7 0.41 8.9E-06 43.4 8.8 68 94-172 1-73 (234)
84 PRK02256 putative aminopeptida 93.6 0.088 1.9E-06 52.6 4.6 76 328-412 380-460 (462)
85 PRK02813 putative aminopeptida 92.9 0.15 3.2E-06 50.7 5.0 76 328-412 346-426 (428)
86 PTZ00371 aspartyl aminopeptida 92.9 0.21 4.5E-06 50.2 6.0 80 328-416 373-457 (465)
87 cd00433 Peptidase_M17 Cytosol 92.8 2.9 6.3E-05 42.1 13.9 124 37-162 153-295 (468)
88 PRK05015 aminopeptidase B; Pro 92.3 5.1 0.00011 39.3 14.2 118 39-162 101-246 (424)
89 KOG2597 Predicted aminopeptida 90.8 2.6 5.7E-05 42.1 10.8 123 38-162 189-330 (513)
90 PTZ00412 leucyl aminopeptidase 90.6 4.6 0.0001 41.0 12.4 119 38-162 212-354 (569)
91 TIGR01893 aa-his-dipept aminoa 83.1 2.4 5.2E-05 43.0 5.9 45 253-303 336-380 (477)
92 COG0260 PepB Leucyl aminopepti 82.9 19 0.00041 36.3 11.8 118 37-162 166-308 (485)
93 PRK12799 motB flagellar motor 49.2 1E+02 0.0022 30.6 8.6 58 94-162 187-244 (421)
94 PF06675 DUF1177: Protein of u 45.7 2.1E+02 0.0046 26.1 9.2 86 92-187 30-130 (276)
95 COG1362 LAP4 Aspartyl aminopep 44.8 34 0.00074 33.6 4.5 76 328-412 354-434 (437)
96 COG4882 Predicted aminopeptida 43.0 62 0.0013 31.2 5.7 61 93-173 189-259 (486)
97 PRK02256 putative aminopeptida 39.4 43 0.00094 33.7 4.5 34 129-166 262-296 (462)
98 COG4187 RocB Arginine degradat 38.9 50 0.0011 32.7 4.6 114 288-421 434-552 (553)
99 PRK15026 aminoacyl-histidine d 36.1 79 0.0017 32.2 5.9 43 255-303 344-386 (485)
100 cd06406 PB1_P67 A PB1 domain i 32.4 1.1E+02 0.0024 22.5 4.5 58 274-336 8-65 (80)
101 COG4635 HemG Flavodoxin [Energ 30.4 28 0.00062 29.3 1.3 34 46-79 3-36 (175)
102 PF02127 Peptidase_M18: Aminop 30.3 53 0.0011 32.8 3.4 74 328-410 353-431 (432)
103 cd06411 PB1_p51 The PB1 domain 29.7 1.1E+02 0.0024 22.5 4.0 31 274-304 4-34 (78)
104 PRK02813 putative aminopeptida 28.3 65 0.0014 32.2 3.7 35 129-168 236-274 (428)
105 PF05411 Peptidase_C32: Equine 27.7 1.3E+02 0.0028 24.2 4.4 50 60-109 47-109 (127)
106 KOG3566 Glycosylphosphatidylin 27.2 5.3E+02 0.012 26.7 9.7 92 61-174 91-194 (617)
107 PF09940 DUF2172: Domain of un 26.3 2.2E+02 0.0048 27.7 6.6 67 85-173 119-187 (386)
108 PF04114 Gaa1: Gaa1-like, GPI 25.0 2.8E+02 0.0061 28.4 7.6 73 81-174 3-78 (504)
109 PF14133 DUF4300: Domain of un 24.6 3.7E+02 0.0081 24.6 7.5 65 41-107 129-194 (250)
110 COG1685 Archaeal shikimate kin 23.8 3.4E+02 0.0074 25.1 7.0 63 281-347 43-106 (278)
111 PF03668 ATP_bind_2: P-loop AT 22.4 1.5E+02 0.0033 27.7 4.6 31 256-287 161-191 (284)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=5.1e-58 Score=455.91 Aligned_cols=384 Identities=54% Similarity=0.885 Sum_probs=334.4
Q ss_pred HhhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccCCCCCCCCC
Q 014449 34 QQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEW 113 (424)
Q Consensus 34 ~~~~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w 113 (424)
++..+.+.++.+.+.++|+++++|.++++||.++|+++|++++....++|++++++++++|+|+|.||+||||.++..+|
T Consensus 93 ~~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w 172 (478)
T PLN02280 93 PDTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEW 172 (478)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCCC
Confidence 44456778888889999999999999999999999999999887666789999995444589999999999999877789
Q ss_pred ccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCccCcHHHHHHcCCCCccceeeEecccCCCCC
Q 014449 114 EHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPT 193 (424)
Q Consensus 114 ~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~ 193 (424)
+++.+++|++||||+|++++++|+|+++|++.+.+++++|.|+|+++||.+.|+++|+++|.+.+.|+++++|..+..|+
T Consensus 173 ~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~ 252 (478)
T PLN02280 173 EHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPT 252 (478)
T ss_pred CCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCCC
Confidence 99888899999999999999999999999988778899999999999996679999999998888899999998776787
Q ss_pred CceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccCC
Q 014449 194 GSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPP 273 (424)
Q Consensus 194 g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~ 273 (424)
+.+..+.+...+|..+++|+++|+++|++.|+.|+||+..+++++..++.+..+..++....+++++.|+||...|+||+
T Consensus 253 g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd 332 (478)
T PLN02280 253 AVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPD 332 (478)
T ss_pred ceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCC
Confidence 87777777777899999999999999999999999999999999999998876655566677999999999999999999
Q ss_pred cEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCC
Q 014449 274 FVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAK 353 (424)
Q Consensus 274 ~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (424)
+|++.+++|+++.++.+++.++|+++++..+...++++++++.......+++...++++++.+++++.+.+|.+......
T Consensus 333 ~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~ 412 (478)
T PLN02280 333 TVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVP 412 (478)
T ss_pred EEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccccCC
Confidence 99999999999999999999999999999877788877776421112347778889999999999988876765332223
Q ss_pred CCCCCCcHHHHHHhcceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 354 KVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 354 ~~~g~tD~~~~~~~ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
..+|++|+++|.+.+|++++++|..+..||.....|+++|++++++|..++++|+.++.+++.+
T Consensus 413 ~~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~~ 476 (478)
T PLN02280 413 PMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLIE 476 (478)
T ss_pred CCeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 5678999999998899999988876655676668999999999999999999999999998864
No 2
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=2.1e-57 Score=449.13 Aligned_cols=390 Identities=51% Similarity=0.849 Sum_probs=334.4
Q ss_pred HHHHHHHHh--hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeeccc
Q 014449 27 NQVMISAQQ--DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDA 104 (424)
Q Consensus 27 ~~~~~~~~~--~~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~Dt 104 (424)
..+++..++ ..+++++++++|.++|++|++|.++++||.++|+++|++++....++|++++++++++|+|+|.||+||
T Consensus 34 ~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h~Da 113 (437)
T PLN02693 34 INLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRADMDA 113 (437)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEeecCC
Confidence 334444444 557899999999999999999999999999999999999876446789999996555689999999999
Q ss_pred CCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCccCcHHHHHHcCCCCccceeeE
Q 014449 105 LPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFG 184 (424)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg~~G~~~l~~~~~~~~~~~~i~ 184 (424)
||.++..+|++....+|++||||+|++++++|+|+++|++.+..++++|.|+|+++||++.|++.++++|.+.+.+++++
T Consensus 114 Vp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~iig 193 (437)
T PLN02693 114 LPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFG 193 (437)
T ss_pred CcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEEE
Confidence 99988778999877889999999999999999999999988767889999999999997789999999998777889999
Q ss_pred ecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEec
Q 014449 185 MHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRG 264 (424)
Q Consensus 185 ~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~g 264 (424)
+|.++..+.|.+..+.|..++|..+++|+++|+++|++.|+.|+|||..+++++.+|+++..+..++....+++++.|+|
T Consensus 194 ~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~G 273 (437)
T PLN02693 194 IHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNG 273 (437)
T ss_pred EecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEEc
Confidence 99988878888777777778899999999999999999999999999999999999999866655666678999999999
Q ss_pred CCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhc
Q 014449 265 GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLL 344 (424)
Q Consensus 265 G~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (424)
|...|+||++|++++++|+.+.. +.+.+.|+++++..+..++++++++........+++...++++++.+.+++++.+
T Consensus 274 G~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~ 351 (437)
T PLN02693 274 GNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLL 351 (437)
T ss_pred CCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999974 5899999999998877778777776621002345667788899999999999987
Q ss_pred CCCCcccCCCCCCCCcHHHHHHhcceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhhhc
Q 014449 345 GPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNEHQ 419 (424)
Q Consensus 345 g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~~~ 419 (424)
|.+.+......+|++|+++|.+.+|.+++++|..++.. +....|+++++++.+.|..++++|+.++.+++.+.+
T Consensus 352 G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~~-~~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~~~ 425 (437)
T PLN02693 352 GQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDETN-GYASSHSPLYRINEDVLPYGAAIHATMAVQYLKEKA 425 (437)
T ss_pred CCcceeecCCCceechHHHHHHHhhhhEEEEecCCCCC-CCCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 88754333456799999999999999988888654210 124689999999999999999999999999987643
No 3
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=3.2e-54 Score=428.62 Aligned_cols=376 Identities=18% Similarity=0.248 Sum_probs=310.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeec--------------------CCCc
Q 014449 23 EILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--------------------VAKT 82 (424)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~~~ 82 (424)
+++++++.+++++..+++++++++|++|||+|++|.++++||+++|+++|++++.. +.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (422)
T PRK06915 2 EQLKKQICDYIESHEEEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSP 81 (422)
T ss_pred cHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCc
Confidence 56789999999999999999999999999999999999999999999999997531 2468
Q ss_pred eEEEEEcCC-CCceeEEEeecccCCCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEE
Q 014449 83 GIVAQIGSG-SRPVVVLRADMDALPLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVR 154 (424)
Q Consensus 83 ~v~a~~~~~-~~~~ill~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~ 154 (424)
|+++++++. ++|+|+|+||+||||+++..+|+ |. .++||++||||+ ||+++++|.|+++|++.+.+++++|.
T Consensus 82 nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~ 161 (422)
T PRK06915 82 NIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVI 161 (422)
T ss_pred eEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEE
Confidence 999999653 45899999999999998877895 44 357999999997 99999999999999988878899999
Q ss_pred EEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHH
Q 014449 155 ILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILT 233 (424)
Q Consensus 155 ~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~ 233 (424)
|+++++|| |+.|+..++.++. ..|+++.. +|++. ....+++|..+++|+++|+++|+|.|+.|.||+..
T Consensus 162 ~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~-----ep~~~---~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~ 231 (422)
T PRK06915 162 FQSVIEEESGGAGTLAAILRGY--KADGAIIP-----EPTNM---KFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEK 231 (422)
T ss_pred EEEecccccCCcchHHHHhcCc--CCCEEEEC-----CCCCc---cceeecccEEEEEEEEEeeccccCCCCcCcCHHHH
Confidence 99999999 6679888888764 46777753 24443 23456789999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcc----cCCC-----CCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 014449 234 ASSVILALQQLISRE----ADPL-----QSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQA 304 (424)
Q Consensus 234 ~~~~i~~l~~~~~~~----~~~~-----~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~ 304 (424)
+++++.+|+++..+. ..+. ...+++++.|+||...|+||+.|++.+++|+.|.++.+++.+.|++.+++.+
T Consensus 232 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~ 311 (422)
T PRK06915 232 SMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELN 311 (422)
T ss_pred HHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 999999998875321 1121 1358999999999999999999999999999999999999999999998865
Q ss_pred HHc----CCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh--cceEEEEeccc
Q 014449 305 AVH----SCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL--IPGVMLSIGIR 378 (424)
Q Consensus 305 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--ip~~~~~~g~~ 378 (424)
... +..++++.... .....+...++++++.+++++++++|.++.. ...+|++|+++|.+. +|++++|
T Consensus 312 ~~~~~~~~~~~~v~~~~~-~~~~~~~~~d~~lv~~l~~a~~~~~G~~~~~--~~~~g~tD~~~~~~~~giP~v~fG---- 384 (422)
T PRK06915 312 DVDEWFVEHPVEVEWFGA-RWVPGELEENHPLMTTLEHNFVEIEGNKPII--EASPWGTDGGLLTQIAGVPTIVFG---- 384 (422)
T ss_pred ccChhhhcCCceEEeecc-cCCcccCCCCCHHHHHHHHHHHHHhCCCCee--ceeeeeccHHHHhccCCCCEEEEC----
Confidence 431 12234433100 0111234567789999999999987887653 366789999999986 9997765
Q ss_pred CCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhhh
Q 014449 379 NEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNEH 418 (424)
Q Consensus 379 ~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~~ 418 (424)
||....+|++||+++++++.+++++|+.++.++|+-+
T Consensus 385 ---pg~~~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~~ 421 (422)
T PRK06915 385 ---PGETKVAHYPNEYIEVDKMIAAAKIIALTLLDWCEVK 421 (422)
T ss_pred ---CCCccccCCCCceeEHHHHHHHHHHHHHHHHHHhCCC
Confidence 4444679999999999999999999999999998765
No 4
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=8.7e-54 Score=419.61 Aligned_cols=357 Identities=21% Similarity=0.301 Sum_probs=299.6
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeee---cCCCceEEEEEcCCCCceeEEEeecccCCCCCCCCCc
Q 014449 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE 114 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~---~~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~ 114 (424)
++.++++++|++|||+|++|.++++||.++|+++||+++. .+.++|+++++++++ |+|+|+||+||||+++..+|+
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~~-~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSGS-PVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCCC-ceEEEEeeecccCCCCcccCc
Confidence 5778999999999999999999999999999999999875 245689999995444 899999999999998777895
Q ss_pred ---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEec
Q 014449 115 ---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMH 186 (424)
Q Consensus 115 ---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~ 186 (424)
|. ..+||++||||+ ||+++++|+|+++|++.+..++++|.|+|++||| |+.|++.+++++.+.++|++++..
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 44 467899999997 9999999999999998888889999999999999 568999999998777788776542
Q ss_pred ccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcc---cCCCCCeeEEEEEEe
Q 014449 187 IDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE---ADPLQSLVLSVTYVR 263 (424)
Q Consensus 187 ~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~---~~~~~~~~~~i~~i~ 263 (424)
|++. ....+++|..+++|+++|+++|++.|+.|.|||..+++++.+++++..+. .+..+..+++++.|+
T Consensus 161 -----p~~~---~i~~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 -----PSGH---GIVYAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred -----CCCc---eeEEEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 2221 11234579999999999999999999999999999999999998865332 123456799999999
Q ss_pred cCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCccc--CCHHHHHHHHHHHH
Q 014449 264 GGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATV--NDDSLHLLVERVGK 341 (424)
Q Consensus 264 gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 341 (424)
||...|+||++|++++|+|+.|+++.+++.+.|+++++......+++++++. ...++++. .++++++.++++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~l~~~~~~~~~ 308 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDI----YSNHRPVASDKDSKLVQLAKDVAK 308 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEE----ecCCCCcCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987655666777776 34455554 35689999999999
Q ss_pred hhcCCCCcccCCCCCCCCcHHHHHHh---cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHh
Q 014449 342 SLLGPKNVGEAKKVMAGEDFAFYQQL---IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 342 ~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~ 416 (424)
+.+|.++.. ...+|++|+++|... +|++.+ | ||+...+|++||+++++++.+++++|+.++..++.
T Consensus 309 ~~~g~~~~~--~~~~g~tD~~~~~~~~~~ip~i~~--G-----pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 377 (377)
T PRK08588 309 SYVGQDIPL--SAIPGATDASSFLKKKPDFPVIIF--G-----PGNNLTAHQVDEYVEKDMYLKFIDIYKEIIIQYLK 377 (377)
T ss_pred HhhCCCCce--ecCCCcccHHHHhhhcCCCCEEEE--C-----CCCCccCCCCCceeEHHHHHHHHHHHHHHHHHHhC
Confidence 987876542 367889999999863 676655 4 55446799999999999999999999999998863
No 5
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=2.3e-52 Score=412.80 Aligned_cols=370 Identities=20% Similarity=0.246 Sum_probs=303.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhHhCCCCCCCc---HHHHHHHHHHHHhCCCCeeecC----CCceEEEEEcCCCCcee
Q 014449 24 ILTNQVMISAQQDKDWLVSVRRQIHENPELLFEE---HNTSALIRRELDKLGIPYAYPV----AKTGIVAQIGSGSRPVV 96 (424)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e---~~~~~~l~~~l~~~G~~~~~~~----~~~~v~a~~~~~~~~~i 96 (424)
..++++.++++++.+++++++++|++|||+++++ .++++||.++|+++|++++... .++|+++++++.++|+|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~i 102 (410)
T PRK06133 23 APDAELLAAAQQEQPAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRI 102 (410)
T ss_pred chHHHHHHHHHHhHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceE
Confidence 3566799999999999999999999999999875 4899999999999999987622 35799999965445899
Q ss_pred EEEeecccCCCCCCCCCccc--cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHH
Q 014449 97 VLRADMDALPLQELVEWEHK--SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHM 170 (424)
Q Consensus 97 ll~~H~DtVp~~~~~~w~~~--~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l 170 (424)
+|+||+||||.+. .|++. ..+||++||||+ |++++++|+|++.|++.+.+++++|.|+|+++|| ++.|++.+
T Consensus 103 ll~~H~D~Vp~~~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~ 180 (410)
T PRK06133 103 MLIAHMDTVYLPG--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSREL 180 (410)
T ss_pred EEEeecCccCCCC--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHH
Confidence 9999999999864 57532 367899999996 9999999999999998887788999999999999 66799999
Q ss_pred HHcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccC-CCCCCCCHHHHHHHHHHHHHHhhhccc
Q 014449 171 IKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREA 249 (424)
Q Consensus 171 ~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~-~~~~g~nai~~~~~~i~~l~~~~~~~~ 249 (424)
+++.. .+.|++|+.+ |+.+.+.+ .++++|..+++++++|+++|+| .|+.|.||+..+++++..|+++.
T Consensus 181 ~~~~~-~~~d~~i~~e--p~~~~~~v----~~~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~---- 249 (410)
T PRK06133 181 IAELA-AQHDVVFSCE--PGRAKDAL----TLATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLG---- 249 (410)
T ss_pred HHHHh-ccCCEEEEeC--CCCCCCCE----EEeccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhcc----
Confidence 97643 3578888764 33222332 2345699999999999999986 79999999999999999998763
Q ss_pred CCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCC
Q 014449 250 DPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVND 329 (424)
Q Consensus 250 ~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (424)
.+....+++++.|+||...|+||++|++.+++|+.|.++.+++.+.|+++++. ....+++++++. ...++++..+
T Consensus 250 ~~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~ 324 (410)
T PRK06133 250 DPAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRF----ERGRPPLEAN 324 (410)
T ss_pred CCCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEe----ccccCCcccC
Confidence 22335689999999999999999999999999999999999999999999987 334566777765 4456666443
Q ss_pred ---HHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHH
Q 014449 330 ---DSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAA 405 (424)
Q Consensus 330 ---~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~ 405 (424)
+.+++.+.+++++. |.++.......+|++|++++... +|++++++|+ ++ ..+|++||+++++++.++++
T Consensus 325 ~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~-----~~-~~aH~~nE~i~i~~~~~~~~ 397 (410)
T PRK06133 325 AASRALAEHAQGIYGEL-GRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGL-----VG-FGAHSNDEYIELNSIVPRLY 397 (410)
T ss_pred cchHHHHHHHHHHHHHc-CCCccccccCCCCCchHHHHHhcCCCceEecccC-----CC-CCCCCCCcEEEcccHHHHHH
Confidence 35788888888775 76543211357889999999987 9988887773 22 45899999999999999999
Q ss_pred HHHHHHHHHHhhh
Q 014449 406 LYTNLAETYLNEH 418 (424)
Q Consensus 406 ~~a~~l~~~~~~~ 418 (424)
+|+.++.++|+++
T Consensus 398 ~~~~~~~~~~~~~ 410 (410)
T PRK06133 398 LLTRMIMELSRDK 410 (410)
T ss_pred HHHHHHHHhhcCC
Confidence 9999999998764
No 6
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.8e-52 Score=416.99 Aligned_cols=369 Identities=15% Similarity=0.157 Sum_probs=297.3
Q ss_pred HHHHHHHHhhHHHHHHHHHHhHhCCCCC--C-CcHHHHHHHHHHHHhCCCCeeecC-----C------CceEEEEEcCC-
Q 014449 27 NQVMISAQQDKDWLVSVRRQIHENPELL--F-EEHNTSALIRRELDKLGIPYAYPV-----A------KTGIVAQIGSG- 91 (424)
Q Consensus 27 ~~~~~~~~~~~~~l~~~l~~l~~ipS~s--~-~e~~~~~~l~~~l~~~G~~~~~~~-----~------~~~v~a~~~~~- 91 (424)
+++.++++++++++++++++|++|||++ + +|+++++||.++|+++||+++... . ++|++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~ 82 (427)
T PRK13013 3 DRLFAAIEARRDDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGAR 82 (427)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCC
Confidence 4577888888999999999999999987 3 468999999999999999987521 1 46999999543
Q ss_pred CCceeEEEeecccCCCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-c
Q 014449 92 SRPVVVLRADMDALPLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-G 163 (424)
Q Consensus 92 ~~~~ill~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g 163 (424)
++|+|+|+||+||||+++ .|+ |. .++||++||||+ ||+++++|+|+++|++.+.+++++|.|+|+++|| |
T Consensus 83 ~~~~i~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 160 (427)
T PRK13013 83 DGDCVHFNSHHDVVEVGH--GWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESG 160 (427)
T ss_pred CCCEEEEEeccccCCCCC--CCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccC
Confidence 458999999999999874 685 54 467899999997 9999999999999999887889999999999999 4
Q ss_pred c-CcHHHHHHcCCCC--ccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHH
Q 014449 164 G-AGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILA 240 (424)
Q Consensus 164 ~-~G~~~l~~~~~~~--~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~ 240 (424)
+ .|.+++++++.+. ..|++|... |++.. ....+++|..+++|+++|+++|++.|+.|.||+..++++|.+
T Consensus 161 ~~~g~~~l~~~~~~~~~~~d~~i~~e-----p~~~~--~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~ 233 (427)
T PRK13013 161 GFGGVAYLAEQGRFSPDRVQHVIIPE-----PLNKD--RICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAE 233 (427)
T ss_pred ChhHHHHHHhcCCccccCCCEEEEec-----CCCCC--ceEEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHH
Confidence 4 4778888887665 457777542 33321 123456799999999999999999999999999999999999
Q ss_pred HHHhhhcc-----c-CC-----CCCeeEEEEEEecCCcC----------cccCCcEEEEEEEecCChhhHHHHHHHHHHH
Q 014449 241 LQQLISRE-----A-DP-----LQSLVLSVTYVRGGTAF----------NIIPPFVEFGGTLRSLTTEGLYQLQKRLKEV 299 (424)
Q Consensus 241 l~~~~~~~-----~-~~-----~~~~~~~i~~i~gG~~~----------n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~ 299 (424)
|++...+. . .+ ....+++++.|+||... |+||++|++++|+|+++.++.+++.+.|+++
T Consensus 234 l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~ 313 (427)
T PRK13013 234 IEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITAL 313 (427)
T ss_pred HHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 97653110 0 01 13578999999999766 9999999999999999999999999999999
Q ss_pred HHHHHHHc-CCeEEEEeeccCCCCCCccc--CCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh--c-ceEEE
Q 014449 300 VKQQAAVH-SCNAFIDLKEEEHPPYPATV--NDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL--I-PGVML 373 (424)
Q Consensus 300 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--i-p~~~~ 373 (424)
++..+... +++++++. ...++++. .++++++.+.+++++.+|.++.. ...+|++|++++.+. + |++.+
T Consensus 314 i~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~lv~~l~~a~~~~~g~~~~~--~~~~g~~D~~~~~~~g~~~~~v~f 387 (427)
T PRK13013 314 LERLKRARPGFAYEIRD----LFEVLPTMTDRDAPVVRSVAAAIERVLGRQADY--VVSPGTYDQKHIDRIGKLKNCIAY 387 (427)
T ss_pred HHHHHhhCCCceeEEEE----cccCCcccCCCCCHHHHHHHHHHHHhhCCCCce--eecCccCCHHHHHhcCCCCCEEEE
Confidence 98865432 55666654 33345544 34589999999999877887543 356788999999887 3 45444
Q ss_pred EecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 374 SIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 374 ~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
| ||....+|++|||+++++|.+++++|+.++.+||+-
T Consensus 388 --G-----Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~~ 424 (427)
T PRK13013 388 --G-----PGILDLAHQPDEWVGIADMVDSAKVMALVLADLLAG 424 (427)
T ss_pred --C-----CCCccccCCCCceeEHHHHHHHHHHHHHHHHHHhcc
Confidence 5 555567999999999999999999999999999864
No 7
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-52 Score=410.31 Aligned_cols=366 Identities=18% Similarity=0.160 Sum_probs=297.8
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhHhCCCCCCCc---HHHHHHHHHHHHhCCCCeeecC-----------------CCceE
Q 014449 25 LTNQVMISAQQDKDWLVSVRRQIHENPELLFEE---HNTSALIRRELDKLGIPYAYPV-----------------AKTGI 84 (424)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----------------~~~~v 84 (424)
...++.++++++.++++++|++|++|||+++++ .++++||.++|+++||+++..+ .++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl 83 (402)
T PRK07338 4 EERAVLDLIDDRQAPMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPAL 83 (402)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeE
Confidence 566788889999999999999999999999774 6799999999999999987521 12689
Q ss_pred EEEEcCCCCceeEEEeecccCCCCCCCCCcccc---ccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEee
Q 014449 85 VAQIGSGSRPVVVLRADMDALPLQELVEWEHKS---KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQ 158 (424)
Q Consensus 85 ~a~~~~~~~~~ill~~H~DtVp~~~~~~w~~~~---~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~ 158 (424)
+++++++.+++|+|+||+||||+++ -||.. ++||++||||+ ||+++++|+|+++|++.+.++++++.|+|+
T Consensus 84 ~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~ 160 (402)
T PRK07338 84 HVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLIN 160 (402)
T ss_pred EEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEE
Confidence 9999654346899999999999864 35542 67899999996 999999999999999888788899999999
Q ss_pred ecCC-ccCcHHHHHHcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCC-CCCCCCHHHHHHH
Q 014449 159 PAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAM-PHSTIDPILTASS 236 (424)
Q Consensus 159 ~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~-~~~g~nai~~~~~ 236 (424)
++|| |+.|++.+++++. ...++++.. +|..+.+.+ ..+++|..+++|+++|+++|++. |+.|.||+..+++
T Consensus 161 ~dEE~g~~g~~~~~~~~~-~~~~~~i~~--ep~~~~~~v----~~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~ 233 (402)
T PRK07338 161 PDEEIGSPASAPLLAELA-RGKHAALTY--EPALPDGTL----AGARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAE 233 (402)
T ss_pred CCcccCChhhHHHHHHHh-ccCcEEEEe--cCCCCCCcE----EeecceeEEEEEEEEeEcccCCCCcccCccHHHHHHH
Confidence 9999 6679999988754 345665554 333233332 23456899999999999999995 8999999999999
Q ss_pred HHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEee
Q 014449 237 VILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLK 316 (424)
Q Consensus 237 ~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 316 (424)
++.+|+++..+ ....+++++.|+||...|+||++|++.+|+|+.|.++.+++.++|+++++..+...+++++++.
T Consensus 234 ~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~- 308 (402)
T PRK07338 234 LALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHG- 308 (402)
T ss_pred HHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEEc-
Confidence 99999886421 2346899999999999999999999999999999999999999999999887555677776653
Q ss_pred ccCCCCCCccc---CCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCC
Q 014449 317 EEEHPPYPATV---NDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPY 392 (424)
Q Consensus 317 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~ 392 (424)
...++++. .++++++.++++.++. |.++.. ...+|++|++++... +|++. ++| ||+ ..+|++|
T Consensus 309 ---~~~~~p~~~~~~~~~l~~~~~~~~~~~-g~~~~~--~~~~g~tDa~~~~~~giP~v~-~~G-----pg~-~~~H~~~ 375 (402)
T PRK07338 309 ---GFGRPPKPIDAAQQRLFEAVQACGAAL-GLTIDW--KDSGGVCDGNNLAAAGLPVVD-TLG-----VRG-GNIHSED 375 (402)
T ss_pred ---cccCCCCCCCcchHHHHHHHHHHHHHc-CCCccc--ccCCccchHHHHhhcCCCeEe-ccC-----CCC-CCCCCcc
Confidence 23344443 3346999999988876 876642 367899999999887 99984 334 332 4589999
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHhhh
Q 014449 393 FFLDEDVLPIGAALYTNLAETYLNEH 418 (424)
Q Consensus 393 E~i~~~~l~~~~~~~a~~l~~~~~~~ 418 (424)
||++++++.+++++|+.++.+|++.+
T Consensus 376 E~v~i~~l~~~~~~~~~~l~~~~~~~ 401 (402)
T PRK07338 376 EFVILDSLVERAQLSALILMRLAQGE 401 (402)
T ss_pred ceEehhhHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999997654
No 8
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=8.6e-52 Score=410.99 Aligned_cols=374 Identities=16% Similarity=0.151 Sum_probs=304.2
Q ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeec--------------------CC
Q 014449 21 VDEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--------------------VA 80 (424)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~ 80 (424)
.++.+.+++.++++++.+++++++++|++|||+|++|.++++||.++|+++|++++.. +.
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (427)
T PRK06837 3 LTPDLTQRILAAVDAGFDAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSG 82 (427)
T ss_pred CchHHHHHHHHHHHhhhHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCC
Confidence 3567788999999999999999999999999999999999999999999999997641 35
Q ss_pred CceEEEEEcCC--CCceeEEEeecccCCCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCc
Q 014449 81 KTGIVAQIGSG--SRPVVVLRADMDALPLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKG 151 (424)
Q Consensus 81 ~~~v~a~~~~~--~~~~ill~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~ 151 (424)
++|+++++++. ++|+|+|+||+||||+++.++|+ |. ..+||++||||+ ||+++++|+|++++++.+..+++
T Consensus 83 ~~nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~ 162 (427)
T PRK06837 83 APNVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAA 162 (427)
T ss_pred CceEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCC
Confidence 78999999643 35899999999999998767896 43 457899999997 99999999999999998888899
Q ss_pred eEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCH
Q 014449 152 TVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDP 230 (424)
Q Consensus 152 ~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~na 230 (424)
+|.|+|+++|| ++.|+..++..+. ..|++|.. +|++. ....+++|..+++|+++|+++|++.|+.|.||
T Consensus 163 ~i~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~-----ep~~~---~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nA 232 (427)
T PRK06837 163 RVHFQSVIEEESTGNGALSTLQRGY--RADACLIP-----EPTGE---KLVRAQVGVIWFRLRVRGAPVHVREAGTGANA 232 (427)
T ss_pred cEEEEEEeccccCCHhHHHHHhcCc--CCCEEEEc-----CCCCC---ccccccceeEEEEEEEEeeccccCCcccCcCH
Confidence 99999999999 6678888877764 46666653 23332 12345679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcc-----cC-----CCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHH
Q 014449 231 ILTASSVILALQQLISRE-----AD-----PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVV 300 (424)
Q Consensus 231 i~~~~~~i~~l~~~~~~~-----~~-----~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~ 300 (424)
+..+++++.+|+++.... .. .....++|++.|+||...|+||+.|++.+++|+.|+++.+++.+.|++++
T Consensus 233 i~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~ 312 (427)
T PRK06837 233 IDAAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACL 312 (427)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHH
Confidence 999999999998764211 00 12345899999999999999999999999999999999999999999999
Q ss_pred HHHHHHc----CCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHH-h-cceEE
Q 014449 301 KQQAAVH----SCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQ-L-IPGVM 372 (424)
Q Consensus 301 ~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip~~~ 372 (424)
+...... +...++++. ....+++ ..+.++++.+.+++++.+|.++.. ...+|++|++++.. . +|++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~a~~~~~g~~~~~--~~~~g~tDa~~~~~~~gip~v~ 387 (427)
T PRK06837 313 AAAARDDRFLSNNPPEVVWS---GFLAEGYVLEPGSEAEAALARAHAAVFGGPLRS--FVTTAYTDTRFYGLYYGIPALC 387 (427)
T ss_pred HHHHhcChhhhhCCCeEEEE---ecccCCcCCCCCCHHHHHHHHHHHHHhCCCCee--eEEeeccchHHHhccCCCCEEE
Confidence 8754332 222334321 1123344 445689999999999977886542 46789999999985 4 99876
Q ss_pred EEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 373 LSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 373 ~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
+| ||+ ..+|++||+++++++.+++++|+.++..+|+=
T Consensus 388 ~G-------p~~-~~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~~ 424 (427)
T PRK06837 388 YG-------PSG-EGIHGFDERVDLESVRKVTKTIALFVAEWCGV 424 (427)
T ss_pred EC-------CCC-CccCCCCceEEHHHHHHHHHHHHHHHHHHhCC
Confidence 54 433 35999999999999999999999999999853
No 9
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=1.4e-51 Score=401.53 Aligned_cols=356 Identities=44% Similarity=0.736 Sum_probs=298.6
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeee-cCCCceEEEEEcCC-CCceeEEEeecccCCCCCCCCCccccc
Q 014449 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY-PVAKTGIVAQIGSG-SRPVVVLRADMDALPLQELVEWEHKSK 118 (424)
Q Consensus 41 ~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~-~~~~~~v~a~~~~~-~~~~ill~~H~DtVp~~~~~~w~~~~~ 118 (424)
.+++++|++|||+|++|.++++||.++|+++|++++. .+...|++++++++ ++|+|+|.||+||||.++...+||...
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 5789999999999999999999999999999999886 44567899999654 458999999999999876545667655
Q ss_pred cCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCccCcHHHHHHcCCCCccceeeEecccCCCCCCceee
Q 014449 119 IDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIAS 198 (424)
Q Consensus 119 ~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~~ 198 (424)
+||++||||+|++++++|+|++.|++.+..++++|.|+|++|||.+.|++.+++++.+.++|++++.++.+..+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999988776788999999999999768999999988777888999887766556666555
Q ss_pred ecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccCCcEEEE
Q 014449 199 ISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFG 278 (424)
Q Consensus 199 ~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~ 278 (424)
..+..++|..+++++++|+++|++.|+.|.||+..+++++.+++++..+..++....+++++.|+||...|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 56777889999999999999999999999999999999999999865333233345689999999999999999999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCc-ccCCCCCC
Q 014449 279 GTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNV-GEAKKVMA 357 (424)
Q Consensus 279 ~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~g 357 (424)
+|+|+++.++.+++.+.|+++++..+...+.+++++. ...+|+...++++++.+++++++.+|.... ..+...+|
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~----~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~g 317 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNY----DRGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMG 317 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE----ecCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCcc
Confidence 9999999999999999999999998777788888877 345555666788999999999997785432 11235789
Q ss_pred CCcHHHHHHhcceEEEEecccCCCCCCCCCCCCCCccCCCCch
Q 014449 358 GEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVL 400 (424)
Q Consensus 358 ~tD~~~~~~~ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l 400 (424)
++|++++++.+|++++++|..+.+-++....|+++...+.+-+
T Consensus 318 g~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 318 SEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred ccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 9999999988999999888765322234578999887776544
No 10
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=5.3e-50 Score=383.87 Aligned_cols=383 Identities=41% Similarity=0.662 Sum_probs=344.5
Q ss_pred HHHHHHhhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCC-CceEEEEEcCC-CCceeEEEeecccCC
Q 014449 29 VMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQIGSG-SRPVVVLRADMDALP 106 (424)
Q Consensus 29 ~~~~~~~~~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~v~a~~~~~-~~~~ill~~H~DtVp 106 (424)
+.+.+ ...++++++.|.|.++|+.+++|.++++|++++|+++||++..... ++.|++.++++ ++|+|+|.+.||.+|
T Consensus 4 ~~~~~-~~~~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALP 82 (392)
T COG1473 4 ILDEI-ELKDELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALP 82 (392)
T ss_pred HHHHH-hhhHHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCc
Confidence 34444 6688999999999999999999999999999999999999444433 68899999765 557999999999999
Q ss_pred CCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCccCcHHHHHHcCCCCc-cceeeEe
Q 014449 107 LQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGD-SEAIFGM 185 (424)
Q Consensus 107 ~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg~~G~~~l~~~~~~~~-~~~~i~~ 185 (424)
..++.+++|....+|.+|+||++++.+++|.++++|++...+++++|+|+|++.||++.|++.|+++|.+.+ +|+++++
T Consensus 83 i~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~ 162 (392)
T COG1473 83 IQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGL 162 (392)
T ss_pred cccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEe
Confidence 999889999989999999999999999999999999988668999999999999997779999999999998 9999999
Q ss_pred cccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecC
Q 014449 186 HIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG 265 (424)
Q Consensus 186 ~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG 265 (424)
|+.|+.|.|.+..+.|....+...|+++++|+++|++.|+.++||+..++.++..|+.+..|..+|....+++++.++||
T Consensus 163 H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG 242 (392)
T COG1473 163 HPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAG 242 (392)
T ss_pred cCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCC
Confidence 99988788999899987777889999999999999999999999999999999999999989889988899999999999
Q ss_pred CcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcC
Q 014449 266 TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLG 345 (424)
Q Consensus 266 ~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 345 (424)
.+.|+||+.+++.+++|....+..+.+.+.|+++++..+..+++++++.+ ...+|+..+++.+.+.+++++++..|
T Consensus 243 ~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~----~~~~p~~~Nd~~~~~~~~~~~~~~~~ 318 (392)
T COG1473 243 TAANVIPDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDY----ERGYPPVVNDPALTDLLAEAAEEVGG 318 (392)
T ss_pred CcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe----cCCCCCccCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999 89999999999999999999999976
Q ss_pred CCCc--ccCCCCCCCCcHHHHHHhcceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 346 PKNV--GEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 346 ~~~~--~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
.... .......||+|+++|.+.+|..++++|...... .....|+|...++.+.+..++++++.+...++..
T Consensus 319 ~~~~~~~~~~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~~-~~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~~ 391 (392)
T COG1473 319 EEVVVVELPPSMAGSEDFGYYLEKVPGAFFFLGTGSADG-GTYPLHHPKFDFDEAALATGVKLLAALALLYLAK 391 (392)
T ss_pred ccceecccCCCCCccchHHHHHHhCCeeEEEeecCcCCC-CcccccCCcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 4332 121234599999999999999999998765331 1235899999999999999999999999887653
No 11
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=3.3e-51 Score=403.75 Aligned_cols=371 Identities=16% Similarity=0.176 Sum_probs=297.3
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccC
Q 014449 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDAL 105 (424)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtV 105 (424)
.+.+.++++++.+++++++++|++|||+|++|.++++||.++|+++||++...+..+|+++++++++ |+|+|+||+|||
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~~-~~i~~~~H~DtV 81 (399)
T PRK13004 3 FKLILMLAEKYKADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHGK-KLIAFDAHIDTV 81 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCCC-cEEEEEeccCcc
Confidence 4678899999999999999999999999999999999999999999998654445678999996544 899999999999
Q ss_pred CCCCCCCCccc----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc--cCcHHHHHHcCCC
Q 014449 106 PLQELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG--GAGAFHMIKEGAL 176 (424)
Q Consensus 106 p~~~~~~w~~~----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg--~~G~~~l~~~~~~ 176 (424)
|.++..+|+++ ..+||++||||+ |++++++|+|+++|++.+..++++|.++|+++||. +.|+++++++..+
T Consensus 82 p~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~~ 161 (399)
T PRK13004 82 GIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDKI 161 (399)
T ss_pred CCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcCC
Confidence 98876689743 356899999997 99999999999999998888899999999999993 4677888876544
Q ss_pred CccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhc--ccCCCCC
Q 014449 177 GDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR--EADPLQS 254 (424)
Q Consensus 177 ~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~--~~~~~~~ 254 (424)
..|+++..+ +++. ....+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+... .....+.
T Consensus 162 -~~d~~i~~e-----~~~~---~i~~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~ 232 (399)
T PRK13004 162 -KPDFVVITE-----PTDL---NIYRGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLGK 232 (399)
T ss_pred -CCCEEEEcc-----CCCC---ceEEecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCCC
Confidence 467777652 2221 1223457999999999999999999999999999999999999887532 1122344
Q ss_pred eeEEEEEEecC-CcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeec---------cCCCCCC
Q 014449 255 LVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKE---------EEHPPYP 324 (424)
Q Consensus 255 ~~~~i~~i~gG-~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 324 (424)
.+++++.|++| ...|+||++|++++|+|++|.++.+++.++|+++... ...+.++++.... .....+|
T Consensus 233 ~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~p 310 (399)
T PRK13004 233 GTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYFP 310 (399)
T ss_pred ceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCccccccccccccc
Confidence 68899999876 4899999999999999999999999999999988432 1234444432100 0012245
Q ss_pred cc--cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHH-h-cceEEEEecccCCCCCCCCCCCCCCccCCCCch
Q 014449 325 AT--VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQ-L-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVL 400 (424)
Q Consensus 325 ~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l 400 (424)
++ +.++++++.+.+++++.+|.++.. ...++++|++.+.+ . +|++.+| ||....+|++||+++++++
T Consensus 311 ~~~~~~~~~~~~~l~~a~~~~~g~~~~~--~~~~~~td~~~~~~~~Gip~v~~G-------pg~~~~aH~~nE~i~i~~l 381 (399)
T PRK13004 311 TWLYPEDHEFVKAAVEAYKGLFGKAPEV--DKWTFSTNGVSIAGRAGIPTIGFG-------PGKEPLAHAPNEYTWKEQL 381 (399)
T ss_pred ccccCCCCHHHHHHHHHHHHHhCCCCee--cccccccCCeEEehhcCCCEEEEC-------CCcccccCCCCceeEHHHH
Confidence 44 356789999999999988887642 25567788877754 4 9988665 5555679999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 014449 401 PIGAALYTNLAETYLNE 417 (424)
Q Consensus 401 ~~~~~~~a~~l~~~~~~ 417 (424)
.+++++|+.++.+||++
T Consensus 382 ~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 382 VKAAAMYAAIPKSLLKK 398 (399)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999999954
No 12
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=1.1e-50 Score=402.30 Aligned_cols=372 Identities=17% Similarity=0.161 Sum_probs=296.3
Q ss_pred HHHHHHHhhHHHHHHHHHHhHhCCCCCC---CcHHHHHHHHHHHHhCCCCeee---cCCCceEEEEEcCC-C--CceeEE
Q 014449 28 QVMISAQQDKDWLVSVRRQIHENPELLF---EEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQIGSG-S--RPVVVL 98 (424)
Q Consensus 28 ~~~~~~~~~~~~l~~~l~~l~~ipS~s~---~e~~~~~~l~~~l~~~G~~~~~---~~~~~~v~a~~~~~-~--~~~ill 98 (424)
++.++++++.+++++++++|++|||++. +|.++++||.++|+++||+++. .+.++|+++++++. + +|+|+|
T Consensus 3 ~~~~~i~~~~~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll 82 (421)
T PRK08596 3 QLLEQIELRKDELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLII 82 (421)
T ss_pred HHHHHHHhhHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEE
Confidence 4677788888999999999999999994 6888999999999999999876 24678999999543 2 267999
Q ss_pred EeecccCCCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHH
Q 014449 99 RADMDALPLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHM 170 (424)
Q Consensus 99 ~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l 170 (424)
+||+||||+++..+|+ |. ..+||++||||+ ||+++++|+|+++|++.+..++++|.|+|+++|| |+.|++++
T Consensus 83 ~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~ 162 (421)
T PRK08596 83 NGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTLQC 162 (421)
T ss_pred eccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHHHH
Confidence 9999999998877796 43 467999999997 9999999999999999888899999999999999 66899999
Q ss_pred HHcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeC----------CcccCCCCCCCCHHHHHHHHHHH
Q 014449 171 IKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGR----------GGHAAMPHSTIDPILTASSVILA 240 (424)
Q Consensus 171 ~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~----------~~Ha~~~~~g~nai~~~~~~i~~ 240 (424)
++++. ..|++++.. |++.. ..+++|..+++++++|. .+|++.|+.|.||+..++++|.+
T Consensus 163 ~~~~~--~~d~~i~~e-----p~~~~----~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~ 231 (421)
T PRK08596 163 CERGY--DADFAVVVD-----TSDLH----MQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQS 231 (421)
T ss_pred HhcCC--CCCEEEECC-----CCCCc----cccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHH
Confidence 98864 457777642 22221 13455777777777775 46999999999999999999999
Q ss_pred HHHhhhc-----ccC--CCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHc------
Q 014449 241 LQQLISR-----EAD--PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVH------ 307 (424)
Q Consensus 241 l~~~~~~-----~~~--~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~------ 307 (424)
|+++... ... +.+..+++++.|+||...|+||++|++.+|+|+.|+++.+++.++|+++++......
T Consensus 232 l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~ 311 (421)
T PRK08596 232 LQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLREN 311 (421)
T ss_pred HHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhhhC
Confidence 9876421 111 124478999999999999999999999999999999999999999999998754311
Q ss_pred CCeEEEE---eeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCC
Q 014449 308 SCNAFID---LKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEE 381 (424)
Q Consensus 308 ~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~ 381 (424)
...+++. ........+|++ +.++++++.+.+++++.+|.++.. ...+|++|++++... +|++.+|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~~--~~~~g~tD~~~~~~~gip~v~~G------- 382 (421)
T PRK08596 312 PPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNAIL--DMSTTVTDGGWFAEFGIPAVIYG------- 382 (421)
T ss_pred CceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCCee--eEEeeecchhhhhhcCCCEEEEC-------
Confidence 1122211 000001124444 456689999999999988887532 356788999999887 9988765
Q ss_pred CCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhhhc
Q 014449 382 KGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNEHQ 419 (424)
Q Consensus 382 pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~~~ 419 (424)
||....+|++||+++++++.+++++|+.++.+||+.++
T Consensus 383 pg~~~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~~ 420 (421)
T PRK08596 383 PGTLEEAHSVNEKVEIEQLIEYTKVITAFIYEWCHTKK 420 (421)
T ss_pred CCcccccCCCCceEEHHHHHHHHHHHHHHHHHHhCCCC
Confidence 44456799999999999999999999999999997653
No 13
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=6.1e-51 Score=402.91 Aligned_cols=363 Identities=21% Similarity=0.246 Sum_probs=292.5
Q ss_pred hhHHHHHHHHHHhHhCCCCCC-----CcHHHHHHHHHHHHhCCCC-eeec---C----C--CceEEEEEcCC-CCceeEE
Q 014449 35 QDKDWLVSVRRQIHENPELLF-----EEHNTSALIRRELDKLGIP-YAYP---V----A--KTGIVAQIGSG-SRPVVVL 98 (424)
Q Consensus 35 ~~~~~l~~~l~~l~~ipS~s~-----~e~~~~~~l~~~l~~~G~~-~~~~---~----~--~~~v~a~~~~~-~~~~ill 98 (424)
++.+++++++++|++|||+|+ .|.++++||.++|+++||+ ++.. + . ++|+++++++. ++++|+|
T Consensus 2 ~~~~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll 81 (400)
T PRK13983 2 ELRDEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWI 81 (400)
T ss_pred chHHHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEE
Confidence 456789999999999999984 4889999999999999998 7652 1 1 58999999654 3479999
Q ss_pred EeecccCCCCCCCCCccc----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-cc-CcHHH
Q 014449 99 RADMDALPLQELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GG-AGAFH 169 (424)
Q Consensus 99 ~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~-~G~~~ 169 (424)
+||+||||+++...|+++ ..+||++||||+ |++++++|.|+++|++.+.+++++|.|+|+++|| |+ .|+++
T Consensus 82 ~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~ 161 (400)
T PRK13983 82 ISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQY 161 (400)
T ss_pred EeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHH
Confidence 999999999877789643 456899999996 9999999999999999888899999999999999 55 48999
Q ss_pred HHHc--CCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHH-hhh
Q 014449 170 MIKE--GALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQ-LIS 246 (424)
Q Consensus 170 l~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~-~~~ 246 (424)
+++. +.+.+.|++++. +.+.|++.. ...+++|..+++|+++|+++|+|.|+.|+||+..+++++.++++ +..
T Consensus 162 ~~~~~~~~~~~~d~~i~~--~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~ 236 (400)
T PRK13983 162 LLKKHPELFKKDDLILVP--DAGNPDGSF---IEIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHE 236 (400)
T ss_pred HHhhcccccCCCCEEEEe--cCCCCCCce---eEEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9986 555567777753 334455542 23456799999999999999999999999999999999999987 422
Q ss_pred cc--cCCC---CCeeEEEEEEecC-CcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCC
Q 014449 247 RE--ADPL---QSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEH 320 (424)
Q Consensus 247 ~~--~~~~---~~~~~~i~~i~gG-~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 320 (424)
.. .++. ...+++++.+.+| ...|+||++|++++++|++++++.+++++.|+++++..+...+.+++++.... .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~-~ 315 (400)
T PRK13983 237 KFNAKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQR-E 315 (400)
T ss_pred hhcccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeec-c
Confidence 11 1111 1246777888877 58999999999999999999999999999999999987666666777765200 1
Q ss_pred CCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCc
Q 014449 321 PPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDV 399 (424)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~ 399 (424)
...++.+.++++++.+.+++++.+|.++.. ...+|++|++++... +|++.+| ||+ ..+|++||++++++
T Consensus 316 ~~~~~~~~~~~~v~~l~~a~~~~~g~~~~~--~~~~g~td~~~~~~~gip~v~~G-------p~~-~~~H~~nE~v~i~~ 385 (400)
T PRK13983 316 QAPPPTPPDSEIVKKLKRAIKEVRGIEPKV--GGIGGGTVAAFLRKKGYPAVVWS-------TLD-ETAHQPNEYAKISN 385 (400)
T ss_pred CCccCCCCCcHHHHHHHHHHHHhcCCCcee--eeecCcHHHHHHHHcCCCEEEeC-------Ccc-ccCCCCCceeeHHH
Confidence 122334567889999999999988987653 356788999999876 9998774 444 36999999999999
Q ss_pred hHHHHHHHHHHHHH
Q 014449 400 LPIGAALYTNLAET 413 (424)
Q Consensus 400 l~~~~~~~a~~l~~ 413 (424)
+.+++++|++++.+
T Consensus 386 l~~~~~~~~~~~~~ 399 (400)
T PRK13983 386 LIEDAKVFALLLLE 399 (400)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 14
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2e-50 Score=395.67 Aligned_cols=355 Identities=17% Similarity=0.190 Sum_probs=286.8
Q ss_pred HHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeee--cCCCceEEEEEcCCCCceeEEEeecccCCCCCCCCCcc-
Q 014449 39 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY--PVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEH- 115 (424)
Q Consensus 39 ~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~--~~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~~- 115 (424)
++++++++|++|||+|++|.++++||.++|+++||+++. .+..+|+++++++ ++|+|+|+||+||||.++...|++
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 678999999999999999999999999999999999875 2456799999844 458999999999999987678964
Q ss_pred --c-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc-c-CcHHHHHHcCC--CCccceeeEe
Q 014449 116 --K-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G-AGAFHMIKEGA--LGDSEAIFGM 185 (424)
Q Consensus 116 --~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg-~-~G~~~l~~~~~--~~~~~~~i~~ 185 (424)
. ..+||++||||+ ||+++++|+|++++++.+..++++|.|+++++||+ + .|++.+++... ....|+++..
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 3 357899999997 99999999999999988778899999999999994 3 58988875421 1246777654
Q ss_pred cccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhccc-CCCCCeeEEEEEEec
Q 014449 186 HIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA-DPLQSLVLSVTYVRG 264 (424)
Q Consensus 186 ~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~-~~~~~~~~~i~~i~g 264 (424)
++......+. ....+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+..+.. ......+++++.|+|
T Consensus 162 ep~~~~~~~~---~i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGD---VIKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCC---eEEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 3221111111 123456799999999999999999999999999999999999987643221 223456899999999
Q ss_pred CC-cCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccC-CHHHHHHHHHHHHh
Q 014449 265 GT-AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVN-DDSLHLLVERVGKS 342 (424)
Q Consensus 265 G~-~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 342 (424)
|. ..|+||+.|++.+++|++|.++.+++.++|+++++. .+.+++++. ...++++.. ++++++.+.+++++
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~----~~~~~p~~~~~~~~~~~l~~a~~~ 310 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEW----TLSGEPFLTPPGKLVDAVVAAIEA 310 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEE----ecCCCcccCCCcHHHHHHHHHHHH
Confidence 86 789999999999999999999999999999998874 356677765 333444433 36799999999998
Q ss_pred hcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHH
Q 014449 343 LLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYL 415 (424)
Q Consensus 343 ~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~ 415 (424)
.+|.++.. ...+|++|++++.+. +|++.+| ||+ ..+|++||+++++++.+++++|+.++.+|+
T Consensus 311 ~~g~~~~~--~~~~g~tda~~~~~~g~p~v~~G-------p~~-~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 311 VTGITPEL--STSGGTSDARFIADYGAQVVEFG-------PVN-ATIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred HhCCCcee--eccCCCccHHHHHHcCCCeEEec-------cCc-ccCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 87987653 356788999999887 8887665 433 359999999999999999999999998886
No 15
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=9.4e-51 Score=400.15 Aligned_cols=369 Identities=17% Similarity=0.153 Sum_probs=290.8
Q ss_pred HHHHHHHHhhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccCC
Q 014449 27 NQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP 106 (424)
Q Consensus 27 ~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp 106 (424)
+++.+.++++.+++++++++|++|||++++|.++++||.++|+++||+....+..+|++++++. ++|+|+|+||+||||
T Consensus 2 ~~~~~~i~~~~~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~-~~~~l~l~~H~DtVp 80 (395)
T TIGR03320 2 NQIKSEAKKYRGDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGH-GPKLIAMDAHIDTVG 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCC-CCcEEEEEecccccC
Confidence 5688889999999999999999999999999999999999999999985333345689999853 348899999999999
Q ss_pred CCCCCCCccc----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCcc--CcHHHHHHcCCCC
Q 014449 107 LQELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAFHMIKEGALG 177 (424)
Q Consensus 107 ~~~~~~w~~~----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg~--~G~~~l~~~~~~~ 177 (424)
+++..+|+++ ..+||++||||+ ||+++++|+|+++|++.+..++.++.|+++++||.+ .+.+.++++..+
T Consensus 81 ~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~- 159 (395)
T TIGR03320 81 IGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI- 159 (395)
T ss_pred CCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC-
Confidence 9887789653 357899999996 999999999999999888778889999999999943 344666665433
Q ss_pred ccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcc-cCC-CCCe
Q 014449 178 DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE-ADP-LQSL 255 (424)
Q Consensus 178 ~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~-~~~-~~~~ 255 (424)
..|++++. + |++. ....+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++.... .++ .+..
T Consensus 160 ~~d~~iv~--e---p~~~---~i~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~ 231 (395)
T TIGR03320 160 KPEFVVIT--E---PTDM---NIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKG 231 (395)
T ss_pred CCCEEEEc--C---CCcc---ceEEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCcC
Confidence 46777764 2 3322 12345679999999999999999999999999999999999998875322 122 2346
Q ss_pred eEEEEEEecCC-cCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeecc---------CCCCCCc
Q 014449 256 VLSVTYVRGGT-AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEE---------EHPPYPA 325 (424)
Q Consensus 256 ~~~i~~i~gG~-~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 325 (424)
+++++.|++|. ..|+||++|++.+|+|++|+++.+++.+.|++++... ..+.++++..... ....+|+
T Consensus 232 t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (395)
T TIGR03320 232 TLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ--GAEAKVEMYNYDRPSYTGLVYPTECYFPT 309 (395)
T ss_pred ceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhc--CCCceEeeeccCcccccccccccccccCc
Confidence 89999999875 8899999999999999999999999999999986542 1123333321000 0012444
Q ss_pred c--cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHH-HHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchH
Q 014449 326 T--VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFA-FYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLP 401 (424)
Q Consensus 326 ~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~-~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~ 401 (424)
+ +.++++++.+.+++++.+|.++.. ...++++|++ ++... +|++.+| ||+...+|++||||+++++.
T Consensus 310 ~~~~~~~~~v~~l~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~g~p~v~~G-------pg~~~~aH~~nE~v~i~~l~ 380 (395)
T TIGR03320 310 WVLPEDHLITKAALETYKRLFGKEPGV--DKWTFSTNGVSIMGRHGIPVIGFG-------PGDEDQAHAPNEKTWKEDLV 380 (395)
T ss_pred cccCCCCHHHHHHHHHHHHHhCCCCce--eecceecccceehhhcCCCEEEEC-------CCchhhccCCCcEEEHHHHH
Confidence 4 456789999999999988887643 2456777874 45555 9988664 56667899999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 014449 402 IGAALYTNLAETYLN 416 (424)
Q Consensus 402 ~~~~~~a~~l~~~~~ 416 (424)
+++++|++++.+||.
T Consensus 381 ~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 381 RAAAMYAAIPTVYLE 395 (395)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999999984
No 16
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=1.4e-50 Score=398.74 Aligned_cols=369 Identities=17% Similarity=0.164 Sum_probs=292.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccCC
Q 014449 27 NQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP 106 (424)
Q Consensus 27 ~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp 106 (424)
+++.++++++.+++++++++|++|||++++|.++++||.++|+++||++...+..+|+++.++++ +++|+|+||+||||
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtVp 80 (395)
T TIGR03526 2 NQIKSEAEKYRGDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTVG 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeeccccC
Confidence 56888899999999999999999999999999999999999999999854333446899998543 38899999999999
Q ss_pred CCCCCCCccc----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc--cCcHHHHHHcCCCC
Q 014449 107 LQELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG--GAGAFHMIKEGALG 177 (424)
Q Consensus 107 ~~~~~~w~~~----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg--~~G~~~l~~~~~~~ 177 (424)
+++...|.++ ..+||++||||+ ||+++++|+|++.|++.+..++.++.++++++||+ +.|++.+++++.+
T Consensus 81 ~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~- 159 (395)
T TIGR03526 81 IGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI- 159 (395)
T ss_pred CCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC-
Confidence 9887789653 357899999995 99999999999999988877788999999999993 4566777776544
Q ss_pred ccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcc-cCC-CCCe
Q 014449 178 DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE-ADP-LQSL 255 (424)
Q Consensus 178 ~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~-~~~-~~~~ 255 (424)
..|+++.. + |++. ....+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+.... .++ .+..
T Consensus 160 ~~d~~i~~--e---p~~~---~i~~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (395)
T TIGR03526 160 KPEFVVIT--E---PTDM---NIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKG 231 (395)
T ss_pred CCCEEEec--C---CCCc---eEEEEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCcc
Confidence 45777664 2 3332 12345679999999999999999999999999999999999998875322 222 2456
Q ss_pred eEEEEEEecCC-cCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeecc---------CCCCCCc
Q 014449 256 VLSVTYVRGGT-AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEE---------EHPPYPA 325 (424)
Q Consensus 256 ~~~i~~i~gG~-~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 325 (424)
+++++.|++|. ..|+||++|++++|+|++++++.+++.+.|+++++.. ..+.++++..... ....+|+
T Consensus 232 ~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 309 (395)
T TIGR03526 232 TLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ--GAEAEVEMYEYDRPSYTGLVYPTECYFPT 309 (395)
T ss_pred ceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc--CCcceEEEeccccccccccccccccccCc
Confidence 99999999875 8999999999999999999999999999999987642 1223333221000 0012344
Q ss_pred c--cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHH-HHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchH
Q 014449 326 T--VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAF-YQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLP 401 (424)
Q Consensus 326 ~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~-~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~ 401 (424)
+ +.++++++++.+++++.+|.++.. ...++++|++. +.+. +|++.+| ||+...+|++||||+++++.
T Consensus 310 ~~~~~~~~~~~~l~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~g~p~v~~G-------pg~~~~aH~~dE~i~i~~l~ 380 (395)
T TIGR03526 310 WVLPEDHLITKAALETYKRLFGKEPGV--DKWTFSTNGVSIMGRHGIPVIGFG-------PGDEDQAHAPNEKTWKEDLV 380 (395)
T ss_pred cccCCCCHHHHHHHHHHHHHhCCCCce--eeeeeecccceehhhcCCCEEEEC-------CcchhhccCCCceEEHHHHH
Confidence 3 456789999999999988876543 24567778754 4555 8988664 55556799999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 014449 402 IGAALYTNLAETYLN 416 (424)
Q Consensus 402 ~~~~~~a~~l~~~~~ 416 (424)
+++++|++++..+|+
T Consensus 381 ~~~~~~~~~~~~~~~ 395 (395)
T TIGR03526 381 KAAAMYAAIPTVYLQ 395 (395)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999875
No 17
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=4.8e-51 Score=399.76 Aligned_cols=345 Identities=20% Similarity=0.286 Sum_probs=280.9
Q ss_pred HHHHHhHhCCC---CCCCcHHHHHHHHHHHHhCCCCeeec---CCCce----EEEEEcC-CCCceeEEEeecccCCCCCC
Q 014449 42 SVRRQIHENPE---LLFEEHNTSALIRRELDKLGIPYAYP---VAKTG----IVAQIGS-GSRPVVVLRADMDALPLQEL 110 (424)
Q Consensus 42 ~~l~~l~~ipS---~s~~e~~~~~~l~~~l~~~G~~~~~~---~~~~~----v~a~~~~-~~~~~ill~~H~DtVp~~~~ 110 (424)
+++++|++||| ++++|.++++||.++|+++|++++.. ....+ +++.+.+ +.+|+|+|+|||||||.++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 68899999999 88899999999999999999998652 12233 4555533 34589999999999999876
Q ss_pred CCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCcccee
Q 014449 111 VEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAI 182 (424)
Q Consensus 111 ~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~ 182 (424)
.+|+ |. ..++|++||||+ |++++++|++++.|++.+..++++|.|+|+++|| |+.|++.+++++.+.+.|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 7896 43 367899999997 9999999999999998887889999999999999 66899999998876667877
Q ss_pred eEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccC------CCCCee
Q 014449 183 FGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREAD------PLQSLV 256 (424)
Q Consensus 183 i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~------~~~~~~ 256 (424)
+..+ +++.. ....+++|..+++|+++|+++|+|.|+.|.||+..++++|.+|.++...... .....+
T Consensus 162 i~~~-----~~~~~--~v~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIPE-----PSGGD--NIVIGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EECC-----CCCCC--ceEEEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 7642 22211 1224457999999999999999999999999999999999999987532111 124579
Q ss_pred EEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCC---CcccCCHHHH
Q 014449 257 LSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPY---PATVNDDSLH 333 (424)
Q Consensus 257 ~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 333 (424)
++++.|+||...|+||++|++++++|+.|.++.+++.++|+++++..+...+++++++. ...+ ...+.+++++
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 310 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEP----VVKWSGPNETPPDSRLV 310 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCC----eeeecCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999887655666666543 2222 2345677899
Q ss_pred HHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHH
Q 014449 334 LLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAAL 406 (424)
Q Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~ 406 (424)
+.+.+++++.+|.++.. ...+|++|++++.+. +|++.+| ||....+|++|||++++++.+++++
T Consensus 311 ~~~~~~~~~~~g~~~~~--~~~~g~tD~~~~~~~gip~v~~G-------pg~~~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 311 KALEAIIKKVRGIEPEV--LVSTGGTDARFLRKAGIPSIVYG-------PGDLETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHHHHHHHHhCCCCeE--eeeccchhHHHHHHcCCcEEEEC-------CCCccccCCCCceeEHHHHHHHhhC
Confidence 99999999877887653 367899999999987 9998765 4444679999999999999998763
No 18
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=1.3e-49 Score=389.08 Aligned_cols=352 Identities=19% Similarity=0.213 Sum_probs=281.0
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeee--cCCCceEEEEEcCCCCceeEEEeecccCCCCCCCCCc---c
Q 014449 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY--PVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE---H 115 (424)
Q Consensus 41 ~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~--~~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~---~ 115 (424)
++++++|++|||+|++|.++++||.++|+++||+++. .+..+|+++.+++ .+|+|+|+||+||||+++.++|+ |
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 6889999999999999999999999999999999875 2356789998754 45899999999999998766896 4
Q ss_pred c-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc-c-CcHHHHHHcCC--CCccceeeEecc
Q 014449 116 K-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G-AGAFHMIKEGA--LGDSEAIFGMHI 187 (424)
Q Consensus 116 ~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg-~-~G~~~l~~~~~--~~~~~~~i~~~~ 187 (424)
. ..+||++||||+ ||+++++|.|++.+++.+..++++|.|+|+++||+ + .|++.+++... ....|+++..++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 3 357899999996 99999999999999888778899999999999994 3 68988875321 124677775432
Q ss_pred cCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcc-cCCCCCeeEEEEEEecCC
Q 014449 188 DVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE-ADPLQSLVLSVTYVRGGT 266 (424)
Q Consensus 188 ~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~-~~~~~~~~~~i~~i~gG~ 266 (424)
......+.. .+.+++|..+++++++|+++|++.|+.|.||+..+++++..|++...+. .......+++++.|+||.
T Consensus 161 ~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGDV---IKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCce---EEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 221111211 2344579999999999999999999999999999999999998764221 111345689999999996
Q ss_pred -cCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc-cCCHHHHHHHHHHHHhhc
Q 014449 267 -AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT-VNDDSLHLLVERVGKSLL 344 (424)
Q Consensus 267 -~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 344 (424)
..|+||++|++.+|+|++|.++.+++.+.|+++++. .+.+++++. ....+|+ ..++++++.+.+++++.+
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~----~~~~~p~~~~~~~~~~~~~~a~~~~~ 309 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEW----SLSGEPFLTNDGKLIDKAREAIEETN 309 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEE----ecCCcceeCCCCHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999998765 356666665 2233332 337789999999999887
Q ss_pred CCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHH
Q 014449 345 GPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETY 414 (424)
Q Consensus 345 g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~ 414 (424)
|.++.. ...+|++|++++... +|++.+| ||. ..+|++||+++++++.+++++|+.++.+|
T Consensus 310 g~~~~~--~~~~g~~d~~~~~~~g~p~~~~G-------p~~-~~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 310 GIKPEL--STGGGTSDGRFIALMGAEVVEFG-------PVN-ATIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCCCce--ecCCCCchHHHHHHcCCCEEEec-------CCc-ccCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 887653 366888999999887 8987665 333 35899999999999999999999998754
No 19
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-49 Score=398.54 Aligned_cols=373 Identities=17% Similarity=0.200 Sum_probs=286.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhHhCCCCCC------CcHHHHHHHHHHHHhCCCC-eee--cCCCceEEEEEcC-CCCce
Q 014449 26 TNQVMISAQQDKDWLVSVRRQIHENPELLF------EEHNTSALIRRELDKLGIP-YAY--PVAKTGIVAQIGS-GSRPV 95 (424)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~------~e~~~~~~l~~~l~~~G~~-~~~--~~~~~~v~a~~~~-~~~~~ 95 (424)
.+++.++++++.++++++|++|++|||+++ +|.++++||+++|+++||+ ++. .++++|+++++.+ +++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~~ 81 (456)
T PRK08201 2 MQQVEAYLRERREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKPT 81 (456)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCCE
Confidence 467888899999999999999999999996 4678999999999999997 444 3356789998843 34589
Q ss_pred eEEEeecccCCCCCCCCCcc---c-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcH
Q 014449 96 VVLRADMDALPLQELVEWEH---K-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGA 167 (424)
Q Consensus 96 ill~~H~DtVp~~~~~~w~~---~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~ 167 (424)
|+|+||+||||+++..+|++ . .++||++||||+ ||+++++|+|++++++.+..++++|.|++++||| |+.|+
T Consensus 82 lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~ 161 (456)
T PRK08201 82 VLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNL 161 (456)
T ss_pred EEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccH
Confidence 99999999999987667964 3 467899999996 9999999999999987766788999999999999 67888
Q ss_pred HHHHHcCC-CCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCc--ccCCCC-CCCCHHHHHHHHHHHHHH
Q 014449 168 FHMIKEGA-LGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGG--HAAMPH-STIDPILTASSVILALQQ 243 (424)
Q Consensus 168 ~~l~~~~~-~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~--Ha~~~~-~g~nai~~~~~~i~~l~~ 243 (424)
..++++.. .-..|++++..+....+ +.. ..+++++|..+++|+++|+++ |+|.+. .+.||+..++++|.+|++
T Consensus 162 ~~~l~~~~~~~~~d~~ii~e~~~~~~-~~~--~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~ 238 (456)
T PRK08201 162 DSFVEEEKDKLAADVVLISDTTLLGP-GKP--AICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLHD 238 (456)
T ss_pred HHHHHhhHHhccCCEEEEeCCCcCCC-CCE--EEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcCC
Confidence 88887532 11346666543221111 111 245678899999999999998 998655 457999999999999975
Q ss_pred hhhcc-----------------------------------cCC-------------CCCeeEEEEEEecCCc----Cccc
Q 014449 244 LISRE-----------------------------------ADP-------------LQSLVLSVTYVRGGTA----FNII 271 (424)
Q Consensus 244 ~~~~~-----------------------------------~~~-------------~~~~~~~i~~i~gG~~----~n~v 271 (424)
+..+. ..+ ....|++++.|+||.. .|+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~NvV 318 (456)
T PRK08201 239 EHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTVI 318 (456)
T ss_pred CCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceEE
Confidence 32100 000 0135889999998754 7999
Q ss_pred CCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCCCc
Q 014449 272 PPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPKNV 349 (424)
Q Consensus 272 p~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~ 349 (424)
|++|++.+|+|+.|+++.+++.+.|+++++... ..++++++.. ...++++ +.+.++++++.+++++.+|.++.
T Consensus 319 P~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~----~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~ 393 (456)
T PRK08201 319 PAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRR----FDKGPAFVAPIDHPAIQAAARAYEAVYGTEAA 393 (456)
T ss_pred CcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEE----CCCcCceecCCCCHHHHHHHHHHHHHhCCCce
Confidence 999999999999999999999999999987632 2345566543 3334444 45668999999999998887654
Q ss_pred ccCCCCCCCC---cHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHH
Q 014449 350 GEAKKVMAGE---DFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYL 415 (424)
Q Consensus 350 ~~~~~~~g~t---D~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~ 415 (424)
. ...|++ |+.++... +|++++|+|.. ...+|++||||+++++.+++++|+.++..+.
T Consensus 394 ~---~~~gg~~~~~~~~~~~~gip~v~~GpG~~------~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 394 F---TRMGGSIPVVETFSSQLHIPIVLMGFGLP------SENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred e---cCCCCcHHHHHHHHHHhCCCEEEecCCCC------CCCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 2 223444 55555455 99987765421 2469999999999999999999999998773
No 20
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.4e-49 Score=391.00 Aligned_cols=349 Identities=22% Similarity=0.311 Sum_probs=280.2
Q ss_pred HHHHHHHHHhHhCCCCCCCc-HHHHHHHHHHHHhCCCCeeec----CCCceEEEEEcCCCCceeEEEeecccCCCCCCCC
Q 014449 38 DWLVSVRRQIHENPELLFEE-HNTSALIRRELDKLGIPYAYP----VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVE 112 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~e-~~~~~~l~~~l~~~G~~~~~~----~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~ 112 (424)
.++++++++|++|||+|++| .++++||.++|+++|+++++. +.++|++++++++.+|+|+|+||+||||+++. .
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~~-~ 82 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDGQ-A 82 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCCC-C
Confidence 46899999999999999887 599999999999999998652 24579999996554589999999999998764 7
Q ss_pred Cc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCC--Ccccee
Q 014449 113 WE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGAL--GDSEAI 182 (424)
Q Consensus 113 w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~--~~~~~~ 182 (424)
|+ |. ..+||++||||+ ||+++++|+|+++|++. +++++|.|+|+++|| ++.|++++++.... ...|++
T Consensus 83 W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~ 160 (385)
T PRK07522 83 WTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGC 160 (385)
T ss_pred CCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEE
Confidence 86 43 346899999996 99999999999999876 468899999999999 66899999875321 235666
Q ss_pred eEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccC--CC------CC
Q 014449 183 FGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREAD--PL------QS 254 (424)
Q Consensus 183 i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~--~~------~~ 254 (424)
+.. +|++. ..+.+++|..+++|+++|+++|+|.|+.+.||+..+++++.+|+++..+... +. ..
T Consensus 161 i~~-----ep~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T PRK07522 161 IVG-----EPTSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPY 232 (385)
T ss_pred EEc-----cCCCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCc
Confidence 542 24432 2344567999999999999999999999999999999999999987533211 11 13
Q ss_pred eeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHH------HHHHcCCeEEEEeeccCCCCCCcccC
Q 014449 255 LVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQ------QAAVHSCNAFIDLKEEEHPPYPATVN 328 (424)
Q Consensus 255 ~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (424)
++++++.|+||...|+||++|++.+|+|+++.++.+++.+.|+++++. .+...+++++++. ...++++..
T Consensus 233 ~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~ 308 (385)
T PRK07522 233 STLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP----LSAYPGLDT 308 (385)
T ss_pred ceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe----ccCCCCCCC
Confidence 689999999999999999999999999999999999999999999987 2344567777765 445666644
Q ss_pred --CHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHH
Q 014449 329 --DDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAA 405 (424)
Q Consensus 329 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~ 405 (424)
++++++.+++++ +.+.. ....+++|+++|... +|++.+| ||+...+|++||+|+++++.++++
T Consensus 309 ~~~~~~v~~~~~~~----~~~~~---~~~~~~td~~~~~~~gip~v~~G-------pg~~~~~H~~~E~i~i~~l~~~~~ 374 (385)
T PRK07522 309 AEDAAAARLVRALT----GDNDL---RKVAYGTEAGLFQRAGIPTVVCG-------PGSIEQAHKPDEFVELAQLAACEA 374 (385)
T ss_pred CCCcHHHHHHHHHh----CCCCc---ceEeeecchHHhccCCCCEEEEC-------CCChhhCCCCCccccHHHHHHHHH
Confidence 356888876654 33321 234578999999876 9987765 555567999999999999999999
Q ss_pred HHHHHHHHHH
Q 014449 406 LYTNLAETYL 415 (424)
Q Consensus 406 ~~a~~l~~~~ 415 (424)
+|+.++.++.
T Consensus 375 ~~~~~~~~~~ 384 (385)
T PRK07522 375 FLRRLLASLA 384 (385)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 21
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.6e-49 Score=391.78 Aligned_cols=357 Identities=21% Similarity=0.281 Sum_probs=288.4
Q ss_pred HhhHHHHHHHHHHhHhCCCCC---CCcHHHHHHHHHHHHhCCCCeeecC---C--------CceEEEEEcCCCCceeEEE
Q 014449 34 QQDKDWLVSVRRQIHENPELL---FEEHNTSALIRRELDKLGIPYAYPV---A--------KTGIVAQIGSGSRPVVVLR 99 (424)
Q Consensus 34 ~~~~~~l~~~l~~l~~ipS~s---~~e~~~~~~l~~~l~~~G~~~~~~~---~--------~~~v~a~~~~~~~~~ill~ 99 (424)
+...+++++++++|++|||+| ..|+++++||.++|+++||+++... . ++|+++..++++ |+|+|+
T Consensus 2 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ill~ 80 (394)
T PRK08651 2 EAMMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSGN-PHLHFN 80 (394)
T ss_pred chhHHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCCC-ceEEEE
Confidence 345689999999999999998 5678999999999999999987622 1 235677765444 899999
Q ss_pred eecccCCCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHH
Q 014449 100 ADMDALPLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMI 171 (424)
Q Consensus 100 ~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~ 171 (424)
||+||||.++. .|+ |. ..++|++||||+ |++++++|+|++.+++.+ +++|.|+|+++|| |+.|+++++
T Consensus 81 ~HlDtvp~~~~-~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~ 156 (394)
T PRK08651 81 GHYDVVPPGEG-WSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLV 156 (394)
T ss_pred eeeeeecCCCC-ccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHH
Confidence 99999998753 244 44 347899999997 999999999999998765 7999999999999 568999999
Q ss_pred HcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhccc--
Q 014449 172 KEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA-- 249 (424)
Q Consensus 172 ~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~-- 249 (424)
+++.+. .|+++..+ +++.- ....+++|..+++|+++|+++|++.|+.|.||+..+++++.+|++...+..
T Consensus 157 ~~~~~~-~d~~i~~~-----~~~~~--~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~ 228 (394)
T PRK08651 157 EEGKVT-PDYVIVGE-----PSGLD--NICIGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSK 228 (394)
T ss_pred hccCCC-CCEEEEec-----CCCCC--ceEEecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhcc
Confidence 987543 56665532 33320 112345799999999999999999999999999999999999987532211
Q ss_pred ----CC-CCCeeEEEEE--EecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCC
Q 014449 250 ----DP-LQSLVLSVTY--VRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPP 322 (424)
Q Consensus 250 ----~~-~~~~~~~i~~--i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (424)
++ ....+++++. ++||...|+||++|++.+++|+++.++.+++.+.|+++++..+..++++++++. ...
T Consensus 229 ~~~~~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~----~~~ 304 (394)
T PRK08651 229 YEYDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEI----TPF 304 (394)
T ss_pred ccccccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEE----ecc
Confidence 11 2345778888 999999999999999999999999999999999999999988777787777765 334
Q ss_pred CCccc--CCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCc
Q 014449 323 YPATV--NDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDV 399 (424)
Q Consensus 323 ~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~ 399 (424)
++++. .++++++.+++++++.+|.++.. ...+|++|+++|... +|++.+| ||....+|++||++++++
T Consensus 305 ~~~~~~~~~~~l~~~~~~a~~~~~g~~~~~--~~~~g~tD~~~~~~~gip~v~~G-------pg~~~~~H~~~E~i~~~~ 375 (394)
T PRK08651 305 SEAFVTDPDSELVKALREAIREVLGVEPKK--TISLGGTDARFFGAKGIPTVVYG-------PGELELAHAPDEYVEVKD 375 (394)
T ss_pred cCCccCCCCCHHHHHHHHHHHHHhCCCCce--eeecCcccHHHHhhCCCcEEEEC-------CCChHhcCCCCceeEHHH
Confidence 45544 34579999999999977987643 367799999999988 9997765 444457999999999999
Q ss_pred hHHHHHHHHHHHHHHHh
Q 014449 400 LPIGAALYTNLAETYLN 416 (424)
Q Consensus 400 l~~~~~~~a~~l~~~~~ 416 (424)
+.+++++|+.++.++..
T Consensus 376 l~~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 376 VEKAAKVYEEVLKRLAK 392 (394)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999998854
No 22
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.4e-49 Score=387.99 Aligned_cols=348 Identities=24% Similarity=0.309 Sum_probs=280.1
Q ss_pred HHHHHHHHHhHhCCCCCCCc-------HHHHHHHHHHHHhCCCCeeec-----CCCceEEEEEcCCCCceeEEEeecccC
Q 014449 38 DWLVSVRRQIHENPELLFEE-------HNTSALIRRELDKLGIPYAYP-----VAKTGIVAQIGSGSRPVVVLRADMDAL 105 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~e-------~~~~~~l~~~l~~~G~~~~~~-----~~~~~v~a~~~~~~~~~ill~~H~DtV 105 (424)
+++++++++|++|||+|++| +++++||.++|+++|++++.. +.++|+++++++++ ++|+|+||+|||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~~-~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSGE-GGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCCC-CeEEEEeeecee
Confidence 57899999999999999875 579999999999999998652 14679999995433 689999999999
Q ss_pred CCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCC
Q 014449 106 PLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALG 177 (424)
Q Consensus 106 p~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~ 177 (424)
|.++ .+|+ |. .++||++||||+ ||+++++|.|++.|++. .++++|.|+|+++|| ++.|++++++++.+.
T Consensus 84 p~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~ 160 (383)
T PRK05111 84 PFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR 160 (383)
T ss_pred cCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC
Confidence 9865 4685 54 467899999996 99999999999999864 467899999999999 668999999887544
Q ss_pred ccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhc----ccCC--
Q 014449 178 DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR----EADP-- 251 (424)
Q Consensus 178 ~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~----~~~~-- 251 (424)
.|+++.. +|++.. +..+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+... ...+
T Consensus 161 -~d~~i~~-----ep~~~~---~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (383)
T PRK05111 161 -PDCAIIG-----EPTSLK---PVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAF 231 (383)
T ss_pred -CCEEEEc-----CCCCCc---eeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 4655542 244421 234567999999999999999999999999999999999999876421 1112
Q ss_pred -CCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cC
Q 014449 252 -LQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VN 328 (424)
Q Consensus 252 -~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 328 (424)
...++++++.|+||...|+||++|++.+|+|++|+++.+++.+.|++.++......+.+++++.. ...+|++ +.
T Consensus 232 ~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 308 (383)
T PRK05111 232 TVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPL---HPPIPGYECPA 308 (383)
T ss_pred CCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEecc---ccCCCCcCCCC
Confidence 13579999999999999999999999999999999999999999999999887777777777541 2234443 34
Q ss_pred CHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHH
Q 014449 329 DDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALY 407 (424)
Q Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~ 407 (424)
++++++.+.+++ |.++. ..++++|+.++... +|++++|+ |....+|++||+++++++.+++++|
T Consensus 309 ~~~l~~~~~~~~----g~~~~----~~~~~~Da~~~~~~g~p~v~~G~-------g~~~~~H~~~E~v~~~~l~~~~~i~ 373 (383)
T PRK05111 309 DHQLVRVVEKLL----GHKAE----VVNYCTEAPFIQQLGCPTLVLGP-------GSIEQAHQPDEYLELSFIKPTRELL 373 (383)
T ss_pred CCHHHHHHHHHh----CCCCc----eeeeeccHHHHHhcCCCEEEECC-------CchHhCcCCCCcccHHHHHHHHHHH
Confidence 556777765543 55432 34578999998877 89887754 4445699999999999999999999
Q ss_pred HHHHHHHHh
Q 014449 408 TNLAETYLN 416 (424)
Q Consensus 408 a~~l~~~~~ 416 (424)
+.++.+++.
T Consensus 374 ~~~~~~~~~ 382 (383)
T PRK05111 374 RQLIHHFCL 382 (383)
T ss_pred HHHHHHHhc
Confidence 999998864
No 23
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=3.6e-49 Score=389.66 Aligned_cols=361 Identities=17% Similarity=0.200 Sum_probs=283.8
Q ss_pred HHHHHHHHHHhHhCCCCCCC--cHHHHHHHHHHHHhCCCCeee---cCCCceEEEEEcCC-C-CceeEEEeecccCCCCC
Q 014449 37 KDWLVSVRRQIHENPELLFE--EHNTSALIRRELDKLGIPYAY---PVAKTGIVAQIGSG-S-RPVVVLRADMDALPLQE 109 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~--e~~~~~~l~~~l~~~G~~~~~---~~~~~~v~a~~~~~-~-~~~ill~~H~DtVp~~~ 109 (424)
.++++++|++|++|||+++. |.++++||.++|+++|++++. .++++|++++++++ + +|+|+|+||+||||+++
T Consensus 8 ~~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~ 87 (400)
T TIGR01880 8 EDIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR 87 (400)
T ss_pred hHHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc
Confidence 46889999999999999865 689999999999999999765 23577899999543 3 38999999999999876
Q ss_pred CCCCc---ccc--ccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-cc-CcHHHHHHcCCCCcc
Q 014449 110 LVEWE---HKS--KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GG-AGAFHMIKEGALGDS 179 (424)
Q Consensus 110 ~~~w~---~~~--~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~-~G~~~l~~~~~~~~~ 179 (424)
..|+ |.. ++||++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| |+ .|++.+++++.+.+.
T Consensus 88 -~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~ 166 (400)
T TIGR01880 88 -EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKAL 166 (400)
T ss_pred -ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCC
Confidence 3685 432 35899999997 9999999999999999888889999999999999 44 599999988766666
Q ss_pred ceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhc------c---cC
Q 014449 180 EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR------E---AD 250 (424)
Q Consensus 180 ~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~------~---~~ 250 (424)
+..++.+.....|++.. ..+.+++|..+++|+++|+++|++.+. ..||+..+++++..|+++... . ..
T Consensus 167 ~~~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 243 (400)
T TIGR01880 167 NLGFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLA 243 (400)
T ss_pred ceEEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCcccc
Confidence 66666533222233321 345677899999999999999999764 479999999999988765211 0 01
Q ss_pred CCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCC-Cc--cc
Q 014449 251 PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPY-PA--TV 327 (424)
Q Consensus 251 ~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~ 327 (424)
....++++++.|+||...|+||++|++.+|+|++|.++.+++.+.|+++++.. ..++++++.. .... ++ .+
T Consensus 244 ~~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~--~~~~~~~~~~----~~~~~~~~~~~ 317 (400)
T TIGR01880 244 IGDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADA--GEGVTYEFSQ----HSGKPLVTPHD 317 (400)
T ss_pred ccccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhcc--CCceEEEEee----cCCCCCCCCCC
Confidence 11247999999999999999999999999999999999999999999998863 2345555543 2222 22 23
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHH
Q 014449 328 NDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAAL 406 (424)
Q Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~ 406 (424)
.++++++.+.+++++. +.++.. ...+|+||++++... +|++.+|+|. +....+|++||+++++++.+++++
T Consensus 318 ~~~~lv~~l~~a~~~~-~~~~~~--~~~~g~tDa~~~~~~gip~v~fgp~~-----~~~~~aH~~dE~i~i~~l~~~~~~ 389 (400)
T TIGR01880 318 DSNPWWVAFKDAVKEM-GCTFKP--EILPGSTDSRYIRAAGVPALGFSPMN-----NTPVLLHDHNEFLNEAVFLRGIEI 389 (400)
T ss_pred CCCHHHHHHHHHHHHc-CCeecc--eeecCcchHHHHHhCCCCeEEECCcc-----CCcccccCCCCceEHHHHHHHHHH
Confidence 4668999999999996 654322 356789999999987 9997665431 122368999999999999999999
Q ss_pred HHHHHHHHH
Q 014449 407 YTNLAETYL 415 (424)
Q Consensus 407 ~a~~l~~~~ 415 (424)
|++++..+.
T Consensus 390 ~~~~l~~~~ 398 (400)
T TIGR01880 390 YQTLISALA 398 (400)
T ss_pred HHHHHHHhh
Confidence 999998875
No 24
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-49 Score=397.95 Aligned_cols=360 Identities=16% Similarity=0.167 Sum_probs=281.6
Q ss_pred HHHHHHHHHHhHhCCCCC--CCcHHHHHHHHHHHHhCCCCee---e---cCCCceEEEEEcCC-CCceeEEEeecccCCC
Q 014449 37 KDWLVSVRRQIHENPELL--FEEHNTSALIRRELDKLGIPYA---Y---PVAKTGIVAQIGSG-SRPVVVLRADMDALPL 107 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s--~~e~~~~~~l~~~l~~~G~~~~---~---~~~~~~v~a~~~~~-~~~~ill~~H~DtVp~ 107 (424)
++++++++++|++|||++ ++|.++++||.++|+++|++++ . .+.++|+++++++. ++++|+|+||+||||+
T Consensus 36 ~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp~ 115 (472)
T PRK09133 36 QQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVEA 115 (472)
T ss_pred HHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCCC
Confidence 567899999999999998 6689999999999999999853 2 23568999999543 4488999999999998
Q ss_pred CCCCCCccc----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-c-cCcHHHHHHcCC-CC
Q 014449 108 QELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-G-GAGAFHMIKEGA-LG 177 (424)
Q Consensus 108 ~~~~~w~~~----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g-~~G~~~l~~~~~-~~ 177 (424)
++. +|+++ .++||++||||+ ||+++++|+|+++|++.+..++++|.|++++||| + +.|++.++++.. ..
T Consensus 116 ~~~-~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~ 194 (472)
T PRK09133 116 KRE-DWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLI 194 (472)
T ss_pred Chh-cCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhcc
Confidence 764 69743 467899999997 9999999999999998887889999999999999 4 579999987642 11
Q ss_pred ccceeeEecccC------CCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcc---
Q 014449 178 DSEAIFGMHIDV------GIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE--- 248 (424)
Q Consensus 178 ~~~~~i~~~~~~------~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~--- 248 (424)
+.+++|. .... ++|+. ...+.+++|..+++|+++|+++|+|.|+ +.|||..++++|.+|+++..+.
T Consensus 195 ~~~~~i~-e~~~~~~~~~gept~---~~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~ 269 (472)
T PRK09133 195 DAEFALN-EGGGGTLDEDGKPVL---LTVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLN 269 (472)
T ss_pred CeEEEEE-CCCccccCCCCCceE---EEeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccC
Confidence 3566655 2211 12221 2344677899999999999999999986 5899999999999998642100
Q ss_pred -------------------------------------------cCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCC
Q 014449 249 -------------------------------------------ADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLT 285 (424)
Q Consensus 249 -------------------------------------------~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~ 285 (424)
..+...++++++.|+||...|+||++|++.+|+|++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p 349 (472)
T PRK09133 270 DVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFP 349 (472)
T ss_pred CccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCC
Confidence 0001356899999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhc-CCCCcccCCCCCCCCcHHHH
Q 014449 286 TEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLL-GPKNVGEAKKVMAGEDFAFY 364 (424)
Q Consensus 286 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~g~tD~~~~ 364 (424)
+++.+++.++|+++++. .++++++.. . ....++.+.+.++++.++++.++.+ |.+.. +...+|+||++++
T Consensus 350 ~~~~e~v~~~I~~~i~~----~~v~v~~~~--~-~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~--~~~~~ggtDa~~~ 420 (472)
T PRK09133 350 GDTIEAVRATLKQVVAD----PAIKITRIG--D-PSPSPASPLRPDIMKAVEKLTAAMWPGVPVI--PSMSTGATDGRYL 420 (472)
T ss_pred chhHHHHHHHHHHHhcC----CCEEEEEcc--C-CCCCCCCCCCcHHHHHHHHHHHHHCCCCcee--ccccccccchHHH
Confidence 99999999999998864 233333221 0 1122344556789999999999886 55432 2356789999999
Q ss_pred HHh-cceEEEE--ecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHh
Q 014449 365 QQL-IPGVMLS--IGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 365 ~~~-ip~~~~~--~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~ 416 (424)
... +|++.++ +| ||....+|++|||++++++.+++++|+.++.++++
T Consensus 421 ~~~gip~~~~~~i~g-----p~~~~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 421 RAAGIPTYGVSGLFG-----DPDDTFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred HhcCCCceeecCccc-----CcccccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 877 8876322 23 55557899999999999999999999999999875
No 25
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-49 Score=394.40 Aligned_cols=361 Identities=16% Similarity=0.178 Sum_probs=280.5
Q ss_pred HHHHHHHHHhHhCCCCCCC-c--HHHHHHHHHHHHhCCCCeeec--CCCceEEEEEcCCCCceeEEEeecccCCCCCCCC
Q 014449 38 DWLVSVRRQIHENPELLFE-E--HNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVE 112 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~-e--~~~~~~l~~~l~~~G~~~~~~--~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~ 112 (424)
+++++++++|++|||++++ | .++++||.++|+++||+++.. .+++|++++++++.+|+|+|+||+||||+++.+.
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 5789999999999999975 3 799999999999999998762 3567899999654458999999999999987668
Q ss_pred Ccc---c-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCC-CCccceee
Q 014449 113 WEH---K-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGA-LGDSEAIF 183 (424)
Q Consensus 113 w~~---~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~-~~~~~~~i 183 (424)
|++ . .++||++||||+ ||+++++|+|++.+++.+ .++.+|.|+|++||| |+.|++.++++.. .-+.|++|
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 974 3 467999999997 999999999999887654 678999999999999 7788888887621 12457777
Q ss_pred EecccCCCCCCceeeecCccccceeEEEEEEEe--CCcccCCCCCCCCHHHHHHHHHHHHHHhhh---------------
Q 014449 184 GMHIDVGIPTGSIASISGPHLAATSVFNVKVEG--RGGHAAMPHSTIDPILTASSVILALQQLIS--------------- 246 (424)
Q Consensus 184 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G--~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~--------------- 246 (424)
+.... ..+.+.. ....+++|..+++++++| +++|+|.|+.+.||+..+++++.+|.+...
T Consensus 161 ~E~~~-~~~~~~~--~i~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 MEGAG-LDPKGRP--QIVLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred ECCCC-ccCCCCe--EEEEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 53211 0012211 234567899999999998 999999999999999999999999975320
Q ss_pred -------cc-----------c---------------CCCCCeeEEEEEEecC----CcCcccCCcEEEEEEEecCChhhH
Q 014449 247 -------RE-----------A---------------DPLQSLVLSVTYVRGG----TAFNIIPPFVEFGGTLRSLTTEGL 289 (424)
Q Consensus 247 -------~~-----------~---------------~~~~~~~~~i~~i~gG----~~~n~vp~~~~~~~~iR~~~~~~~ 289 (424)
+. . ......++|++.|+|| ...|+||++|++++|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 00 0 0012468999999887 467999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHH-
Q 014449 290 YQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQ- 366 (424)
Q Consensus 290 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~- 366 (424)
+++.+.|++++++. +..+++.. ....+++ +.++++++.+++++++.+|.++... ...+|++|+++|.+
T Consensus 318 ~~v~~~l~~~~~~~----~~~~~~~~----~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~~-~~~~g~~d~~~~~~~ 388 (436)
T PRK06446 318 YKIFELLKKHLQKV----GFNGEIIV----HGFEYPVRTSVNSKVVKAMIESAKRVYGTEPVVI-PNSAGTQPMGLFVYK 388 (436)
T ss_pred HHHHHHHHHHHHHc----CCCeEEEE----cCCcceeecCCCCHHHHHHHHHHHHHhCCCCcee-cCCCCcchHHHHHHH
Confidence 99999999998763 23445444 2233343 4567899999999999988876532 23456678888866
Q ss_pred h-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHH
Q 014449 367 L-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYL 415 (424)
Q Consensus 367 ~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~ 415 (424)
. +|+++.++|.. |+ ....|++||+|+++++.+++++|..++.++.
T Consensus 389 ~gip~v~~~~g~g---~~-~~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 389 LGIRDIVSAIGVG---GY-YSNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred hCCCcceeecccC---CC-CcCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 4 89876444422 22 2578999999999999999999999998764
No 26
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=3.4e-48 Score=378.26 Aligned_cols=346 Identities=17% Similarity=0.175 Sum_probs=271.7
Q ss_pred HHHHHHHHHHhHhCCCCCCCcH---HHHHHHHHHHHhCCCCeeecC---C-CceEEEEEcC--CCCceeEEEeecccCCC
Q 014449 37 KDWLVSVRRQIHENPELLFEEH---NTSALIRRELDKLGIPYAYPV---A-KTGIVAQIGS--GSRPVVVLRADMDALPL 107 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~e~---~~~~~l~~~l~~~G~~~~~~~---~-~~~v~a~~~~--~~~~~ill~~H~DtVp~ 107 (424)
.++++++|++|++|||++++|. ++.+|+.++|+++|++++..+ + .+++++++++ +.+|+|+|+||+||||+
T Consensus 10 ~~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~ 89 (376)
T PRK07473 10 SEAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHP 89 (376)
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCC
Confidence 5789999999999999999875 677899999999999987622 2 3478999853 23589999999999975
Q ss_pred CC-CCCCccccccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCcccee
Q 014449 108 QE-LVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAI 182 (424)
Q Consensus 108 ~~-~~~w~~~~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~ 182 (424)
.+ +..+||. ++||++||||+ ||+++++|+|++++++.+..++.+|.|+|++||| |+.|++.+++++.. ..|++
T Consensus 90 ~~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~ 167 (376)
T PRK07473 90 VGTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYV 167 (376)
T ss_pred CCCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEE
Confidence 43 2223454 67899999994 9999999999999998887788899999999999 77899999987543 45777
Q ss_pred eEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccC-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEE
Q 014449 183 FGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTY 261 (424)
Q Consensus 183 i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~-~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~ 261 (424)
|+. +|....+.+ ..+++|..+++|+++|+++|++ .|+.|+||+..+++++.+|+++.. ...+++++.
T Consensus 168 iv~--ep~~~~~~v----~~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~ 235 (376)
T PRK07473 168 LVP--EPGRPDNGV----VTGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGI 235 (376)
T ss_pred EEe--CCCCCCCCE----EEECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEee
Confidence 765 332222222 2456799999999999999987 699999999999999999998632 235899999
Q ss_pred EecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCC---HHHHHHHHH
Q 014449 262 VRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVND---DSLHLLVER 338 (424)
Q Consensus 262 i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 338 (424)
|+||...|+||++|++++++|....++.+++.+++.+.+. ...+++++++. ....+++..+ +++++.+++
T Consensus 236 i~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~ 308 (376)
T PRK07473 236 VHGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG---TEDDVTFTVTR----GVTRPVWEPDAGTMALYEKARA 308 (376)
T ss_pred EEcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---cCCCeEEEEEc----cccCCCCCCChhHHHHHHHHHH
Confidence 9999999999999999999998887777777666655544 23455566543 2234444332 358888888
Q ss_pred HHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHH
Q 014449 339 VGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAET 413 (424)
Q Consensus 339 ~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~ 413 (424)
+.+.. |.++.. ...+|++|++++... +|++. ++| ||. ..+|++|||++++++.+++++|+.++.+
T Consensus 309 ~~~~~-g~~~~~--~~~~g~tDa~~~~~~giP~v~-g~G-----pg~-~~~H~~dE~v~i~~l~~~~~vl~~~l~~ 374 (376)
T PRK07473 309 IAGQL-GLSLPH--GSAGGGSDGNFTGAMGIPTLD-GLG-----VRG-ADYHTLNEHIEVDSLAERGRLMAGLLAT 374 (376)
T ss_pred HHHHc-CCCCcc--ccCccccHhhhHHhcCCCEEE-ecc-----CCC-CCCCCCCceEecccHHHHHHHHHHHHHh
Confidence 87665 876542 367889999999887 99876 345 443 4589999999999999999999999865
No 27
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=5.7e-49 Score=384.03 Aligned_cols=338 Identities=22% Similarity=0.311 Sum_probs=272.0
Q ss_pred HHHHHhHhCCCCCCCc-HHHHHHHHHHHHhCCCCeeecC-----CCceEEEEEcCCCCceeEEEeecccCCCCCCCCCc-
Q 014449 42 SVRRQIHENPELLFEE-HNTSALIRRELDKLGIPYAYPV-----AKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE- 114 (424)
Q Consensus 42 ~~l~~l~~ipS~s~~e-~~~~~~l~~~l~~~G~~~~~~~-----~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~- 114 (424)
+++++|++|||+++++ .++++||.++|+++|++++..+ .++|+++.+++.++++|+|+||+||||.++ ..|+
T Consensus 1 ~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~-~~w~~ 79 (364)
T TIGR01892 1 EILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDD-AAWTR 79 (364)
T ss_pred ChHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCC-CcCCC
Confidence 4788999999999875 7999999999999999987622 367999999654458999999999999987 4886
Q ss_pred --cc-cccCCccccCC---chHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecc
Q 014449 115 --HK-SKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHI 187 (424)
Q Consensus 115 --~~-~~~~g~l~GrG---~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~ 187 (424)
|. .+++|++|||| +||+++++|+|+++|++. .++++|.|+|+++|| ++.|++++++++.+ ..|+++..
T Consensus 80 ~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~-- 154 (364)
T TIGR01892 80 DPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIG-- 154 (364)
T ss_pred CCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEEC--
Confidence 43 46789999999 499999999999999875 468899999999999 66899999998753 45665542
Q ss_pred cCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhccc-----CCC--CCeeEEEE
Q 014449 188 DVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA-----DPL--QSLVLSVT 260 (424)
Q Consensus 188 ~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~-----~~~--~~~~~~i~ 260 (424)
+|++... ..+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++..... .+. ..++++++
T Consensus 155 ---ep~~~~~---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (364)
T TIGR01892 155 ---EPTRLIP---VRAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIG 228 (364)
T ss_pred ---CCCCcee---EEeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEe
Confidence 3555432 2345699999999999999999999999999999999999987642211 011 24699999
Q ss_pred EEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHH-HcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHH
Q 014449 261 YVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAA-VHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVE 337 (424)
Q Consensus 261 ~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 337 (424)
.|+||...|+||++|++.+|+|++|.++.+++.+.|+++++..+. ..+++++++. ...+|++ ..++++++.+.
T Consensus 229 ~i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~~~~~v~~~~ 304 (364)
T TIGR01892 229 VIQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEV----VSTDPGVNTEPDAELVAFLE 304 (364)
T ss_pred eeecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEE----ccCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999987643 4566777665 3444444 44567777776
Q ss_pred HHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHH
Q 014449 338 RVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNL 410 (424)
Q Consensus 338 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~ 410 (424)
+++ |.++. ..++++|+++|... +|++.+| ||+...+|++||+++++++.+++++|+.+
T Consensus 305 ~~~----~~~~~----~~~~~tD~~~~~~~gip~v~~G-------pg~~~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 305 ELS----GNAPE----VVSYGTEAPQFQELGAEAVVCG-------PGDIRQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred HHh----CCCCc----eecccccHHHHHhCCCcEEEEC-------CCChHhCCCCCceeeHHHHHHHHHHHHHh
Confidence 543 54332 34668999999887 9987765 45555799999999999999999999876
No 28
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=1.6e-48 Score=377.56 Aligned_cols=330 Identities=14% Similarity=0.121 Sum_probs=267.1
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccCCCCCCCCCccc
Q 014449 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHK 116 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~~~ 116 (424)
.+++++++++|++|||++++|.++++||.++|+++|++++..+. +|++. .+ +|+|+|+||+||||. |...
T Consensus 9 ~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~-~~~~~--~g--~~~lll~gH~DtVp~-----~~~~ 78 (346)
T PRK00466 9 KQKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILPD-SNSFI--LG--EGDILLASHVDTVPG-----YIEP 78 (346)
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEecC-CCcEe--cC--CCeEEEEeccccCCC-----CCCc
Confidence 35889999999999999999999999999999999999887443 35543 22 378999999999984 2223
Q ss_pred cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCCC
Q 014449 117 SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIP 192 (424)
Q Consensus 117 ~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~~ 192 (424)
..+||++||||+ ||+++++|+|++++++.+ .++.|+|++||| ++.|++++++++. +.|+++.. +|
T Consensus 79 ~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~-----ep 147 (346)
T PRK00466 79 KIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVG-----EP 147 (346)
T ss_pred eeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEc-----CC
Confidence 467899999996 999999999999998765 358999999999 5689999998863 46776653 24
Q ss_pred CCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccC
Q 014449 193 TGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIP 272 (424)
Q Consensus 193 ~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp 272 (424)
++.. ...++++|..+++|+++|+++|+|.|+ .||+..+++++.+|.+.. .+....+++++.|+||...|+||
T Consensus 148 ~~~~--~i~~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~----~~~~~~t~~~~~i~gG~~~NvvP 219 (346)
T PRK00466 148 SNGT--DIVVEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQP----ENYDKPSIVPTIIRAGESYNVTP 219 (346)
T ss_pred CCCC--ceEEEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhcc----ccCCCCcceeeEEecCCcCcccC
Confidence 4421 123456799999999999999999875 599999999999987642 12334689999999999999999
Q ss_pred CcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCCCcc
Q 014449 273 PFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPKNVG 350 (424)
Q Consensus 273 ~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~ 350 (424)
++|++.+|+|+.|+++.+++.++|++.++. +++++. ..++++ +.++++++.+.+++++. |.++..
T Consensus 220 ~~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~~~------~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~~ 286 (346)
T PRK00466 220 AKLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLKIV------DETPPVKVSINNPVVKALMRALLKQ-NIKPRL 286 (346)
T ss_pred CceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEeec------cCCCCcccCCCCHHHHHHHHHHHHh-CCCceE
Confidence 999999999999999999999999988864 334332 233333 44578999999999986 877542
Q ss_pred cCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 351 EAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 351 ~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
...+|++|+++|.+. .|++.+ | ||....+|++|||++++++.+++++|+.++.+|+++
T Consensus 287 --~~~~g~tD~~~~~~~~~~~v~f--G-----pg~~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 287 --VRKAGTSDMNILQKITTSIATY--G-----PGNSMLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred --EecCCcCcHHHHHHhCCCEEEE--C-----CCCcccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 356789999999887 455444 5 666677999999999999999999999999999865
No 29
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.4e-48 Score=377.23 Aligned_cols=338 Identities=16% Similarity=0.138 Sum_probs=272.6
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCC--CceEEEEEcCCCCceeEEEeecccCCCCCCCCCcc
Q 014449 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA--KTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEH 115 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~~ 115 (424)
+++++++++|++|||+|++|.++++||.++|+++||+++.... ..|+++ +++|+|+|+||+||||.... +
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~~----~ 73 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRAE----F 73 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCCC----C
Confidence 5789999999999999999999999999999999999876322 345555 23489999999999997531 1
Q ss_pred ccccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCC
Q 014449 116 KSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGI 191 (424)
Q Consensus 116 ~~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~ 191 (424)
..+||++||||+ ||+++++|+|++.|++. ..+++|.|+|++||| |+.|++.++++. ..|+++.. +|
T Consensus 74 -~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~--ep-- 143 (347)
T PRK08652 74 -FVDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVL--EP-- 143 (347)
T ss_pred -EEECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEe--cC--
Confidence 256899999997 99999999999999854 346799999999999 678999998763 23666654 22
Q ss_pred CCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCccc
Q 014449 192 PTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNII 271 (424)
Q Consensus 192 ~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~v 271 (424)
++. ....+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++......... .+.+++.++||...|+|
T Consensus 144 -~~~---~i~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~-~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 144 -TDL---KVAIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYFD-PHIGIQEIIGGSPEYSI 218 (347)
T ss_pred -CCC---ceeeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcccC-CCCcceeeecCCCCCcc
Confidence 221 1235567999999999999999999999999999999999999886533211111 35677789999999999
Q ss_pred CCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCccc
Q 014449 272 PPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGE 351 (424)
Q Consensus 272 p~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (424)
|++|++.+|+|+++.++.+++.++|+++++. .++++++.. .....+...++++++.+.+++++. |.++..
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~----~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~~- 288 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTE----IWDGFELDEDEEIVQLLEKAMKEV-GLEPEF- 288 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEec----cCCcccCCCCCHHHHHHHHHHHHh-CCCCCc-
Confidence 9999999999999999999999999998864 345555433 222223456788999999999998 887642
Q ss_pred CCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHh
Q 014449 352 AKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 352 ~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~ 416 (424)
...+|++|+++|... +|++.+| ||+...+|++|||++++++.+++++|..++..++.
T Consensus 289 -~~~~g~tDa~~~~~~gip~v~~G-------pg~~~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 289 -TVMRSWTDAINFRYNGTKTVVWG-------PGELDLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred -CcCCccchhHHHHHCCCCEEEEC-------CCchhhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 356788999999888 9998765 55556799999999999999999999999988875
No 30
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-47 Score=383.95 Aligned_cols=369 Identities=15% Similarity=0.130 Sum_probs=285.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhHhCCCCCCC------cHHHHHHHHHHHHhCCC-Ceeec--CCCceEEEEEcCC-CCce
Q 014449 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFE------EHNTSALIRRELDKLGI-PYAYP--VAKTGIVAQIGSG-SRPV 95 (424)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~------e~~~~~~l~~~l~~~G~-~~~~~--~~~~~v~a~~~~~-~~~~ 95 (424)
++++.++++++.+++++++++|++|||+|++ |.++++||.++|+++|| +++.. ++++|++++++++ .+|+
T Consensus 6 ~~~~~~~i~~~~~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~~~ 85 (449)
T PRK07907 6 ADDLRARVAELLPRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGAPT 85 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCCCE
Confidence 4568888999999999999999999999963 67899999999999998 67662 4678999999654 3589
Q ss_pred eEEEeecccCCCCCCCCCcc---c-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcH
Q 014449 96 VVLRADMDALPLQELVEWEH---K-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGA 167 (424)
Q Consensus 96 ill~~H~DtVp~~~~~~w~~---~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~ 167 (424)
|+|+||+||||+++..+|++ . .++||++||||+ ||+++++|+|++++ +.+++++|.|+++++|| |+.|+
T Consensus 86 lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~g~ 162 (449)
T PRK07907 86 VLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSPSL 162 (449)
T ss_pred EEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCccH
Confidence 99999999999987668974 3 467999999997 99999999999998 34678999999999999 77899
Q ss_pred HHHHHcCC-CCccceeeEecccCCCC-CCceeeecCccccceeEEEEEEE--eCCcccCC-CCCCCCHHHHHHHHHHHHH
Q 014449 168 FHMIKEGA-LGDSEAIFGMHIDVGIP-TGSIASISGPHLAATSVFNVKVE--GRGGHAAM-PHSTIDPILTASSVILALQ 242 (424)
Q Consensus 168 ~~l~~~~~-~~~~~~~i~~~~~~~~~-~g~~~~~~g~~~~g~~~~~i~v~--G~~~Ha~~-~~~g~nai~~~~~~i~~l~ 242 (424)
++++++.. ....|++++.. ++.. .+... ..++++|..+++++++ |+++|+|. +..+.||+..+++++.+|.
T Consensus 163 ~~~l~~~~~~~~~d~~iv~E--~~~~~~~~p~--i~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~ 238 (449)
T PRK07907 163 ERLLAEHPDLLAADVIVIAD--SGNWSVGVPA--LTTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLH 238 (449)
T ss_pred HHHHHhchHhhcCCEEEEec--CCcCCCCCeE--EEEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhC
Confidence 99988642 12356666652 2211 11111 2356789999999998 89999997 4678999999999999997
Q ss_pred Hhhhccc-------CC---------------------------------CCCeeEEEEEEec---CCcCcccCCcEEEEE
Q 014449 243 QLISREA-------DP---------------------------------LQSLVLSVTYVRG---GTAFNIIPPFVEFGG 279 (424)
Q Consensus 243 ~~~~~~~-------~~---------------------------------~~~~~~~i~~i~g---G~~~n~vp~~~~~~~ 279 (424)
+...+.. .+ ....+++++.|++ |...|+||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~ 318 (449)
T PRK07907 239 DEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARL 318 (449)
T ss_pred CCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEE
Confidence 6421100 00 1245889999986 468899999999999
Q ss_pred EEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCCCcccCCCCCC
Q 014449 280 TLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPKNVGEAKKVMA 357 (424)
Q Consensus 280 ~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g 357 (424)
|+|+.|+++.+++.+.|+++++.. ...+.+++++. ...++|+ +.++++++.+++++++.+|.++.. ...+|
T Consensus 319 diR~~p~~~~e~v~~~l~~~l~~~-~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~~--~~~~g 391 (449)
T PRK07907 319 SLRVAPGQDAAEAQDALVAHLEAH-APWGAHVTVER----GDAGQPFAADASGPAYDAARAAMREAWGKDPVD--MGMGG 391 (449)
T ss_pred EEEcCCCCCHHHHHHHHHHHHHhc-CCCCcEEEEEE----CCCcCceeCCCCCHHHHHHHHHHHHHhCCCcee--cCCCC
Confidence 999999999999999999998764 22355666665 3334444 456789999999999998987643 24445
Q ss_pred CCcH-HHHHHh---cceEEEEecccCCCCCCC-CCCCCCCccCCCCchHHHHHHHHHHHHHHH
Q 014449 358 GEDF-AFYQQL---IPGVMLSIGIRNEEKGSI-HPPHSPYFFLDEDVLPIGAALYTNLAETYL 415 (424)
Q Consensus 358 ~tD~-~~~~~~---ip~~~~~~g~~~~~pG~~-~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~ 415 (424)
+++. +.|.+. +|++.+| ||+. ..+|++||+|+++++.+++++|+.++..|.
T Consensus 392 ~~~~~~~~~~~~~~~~~v~~G-------pg~~~~~aH~~nE~i~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 392 SIPFIAELQEAFPQAEILVTG-------VEDPKTRAHSPNESVHLGELERAAVAEALLLARLA 447 (449)
T ss_pred cHHHHHHHHHhcCCCcEEEec-------cCCCCCCCcCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 5442 334433 5666655 4443 469999999999999999999999998873
No 31
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-48 Score=394.18 Aligned_cols=382 Identities=14% Similarity=0.146 Sum_probs=286.2
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHhHhCCCCCCCcH---------HHHHHHHHHHHhCCCCeeec-CCCceEEEEEcCC
Q 014449 22 DEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEH---------NTSALIRRELDKLGIPYAYP-VAKTGIVAQIGSG 91 (424)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e~---------~~~~~l~~~l~~~G~~~~~~-~~~~~v~a~~~~~ 91 (424)
..+++-....-+....+++++++++|++|||+|++|. ++++||.++|+.+|++++.. ..+.|+++.+.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~ 107 (486)
T PRK08262 28 SRQIDVPAVAPVAVDEDAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGS 107 (486)
T ss_pred cCCCCccccCCCcCCHHHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECC
Confidence 3444433444455667899999999999999999763 48899999999999987652 1235777777433
Q ss_pred -CC-ceeEEEeecccCCCCCC--CCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeec
Q 014449 92 -SR-PVVVLRADMDALPLQEL--VEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPA 160 (424)
Q Consensus 92 -~~-~~ill~~H~DtVp~~~~--~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~ 160 (424)
++ ++|+|+||+||||.++. ..|+ |. .++||++||||+ ||+++++|.|++.|++.+.+++++|.|+|+++
T Consensus 108 ~~~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~d 187 (486)
T PRK08262 108 DPSLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHD 187 (486)
T ss_pred CCCCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecc
Confidence 33 89999999999998753 4695 43 457899999995 99999999999999988888999999999999
Q ss_pred CC-ccCcHHHHHHcCCC--Cccceee------Eecc--cCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCC
Q 014449 161 EE-GGAGAFHMIKEGAL--GDSEAIF------GMHI--DVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTID 229 (424)
Q Consensus 161 EE-g~~G~~~l~~~~~~--~~~~~~i------~~~~--~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~n 229 (424)
|| |+.|++.+++.... ...++++ ..+. ....|++ ..+.+++|..+++|+++|+++|++.|+. .|
T Consensus 188 EE~g~~G~~~l~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~~----~i~~~~kG~~~~~i~v~G~~~Hss~p~~-~n 262 (486)
T PRK08262 188 EEVGGLGARAIAELLKERGVRLAFVLDEGGAITEGVLPGVKKPVA----LIGVAEKGYATLELTARATGGHSSMPPR-QT 262 (486)
T ss_pred cccCCcCHHHHHHHHHHhcCCEEEEEeCCceecccccCCCCceEE----eeEEeeeeeEEEEEEEecCCCCCCCCCC-CC
Confidence 99 66799888753111 1233322 2111 1122322 2345668999999999999999999988 99
Q ss_pred HHHHHHHHHHHHHHhhhcc--------------------------------------------cCCCCCeeEEEEEEecC
Q 014449 230 PILTASSVILALQQLISRE--------------------------------------------ADPLQSLVLSVTYVRGG 265 (424)
Q Consensus 230 ai~~~~~~i~~l~~~~~~~--------------------------------------------~~~~~~~~~~i~~i~gG 265 (424)
|+..++++|.+|++...+. ..+...++++++.|+||
T Consensus 263 ai~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG 342 (486)
T PRK08262 263 AIGRLARALTRLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGS 342 (486)
T ss_pred HHHHHHHHHHHHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecC
Confidence 9999999999998631000 00123568999999999
Q ss_pred CcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcC
Q 014449 266 TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLG 345 (424)
Q Consensus 266 ~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 345 (424)
...|+||++|++++|+|++|+++.+++.++|+++++.. ++++++.. ....+.++...++++++.+++++++.+|
T Consensus 343 ~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~v~~~~--~~~~~~~~~~~~~~lv~~l~~a~~~~~g 416 (486)
T PRK08262 343 PKDNVLPQRATATVNFRILPGDSVESVLAHVRRAVADD----RVEIEVLG--GNSEPSPVSSTDSAAYKLLAATIREVFP 416 (486)
T ss_pred CccccCCCccEEEEEEEeCCCCCHHHHHHHHHHHhccC----ceEEEEec--CCCCCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999988753 44444432 0011223345677899999999999876
Q ss_pred CCCcccCCCCCCCCcHHHHHHhcceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHh
Q 014449 346 PKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 346 ~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~ 416 (424)
.... .+...+|++|+++|...+|+++.+++... .||+...+|++||+++++++.+++++|+.++..++.
T Consensus 417 ~~~~-~~~~~~g~tDa~~~~~~~p~~~~~~~~~~-gpg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 417 DVVV-APYLVVGATDSRHYSGISDNVYRFSPLRL-SPEDLARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred CCcc-ccceecccccHHHHHHhcCCeEEECCccC-CcccccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 4221 12346789999999887776544333322 266667899999999999999999999999998864
No 32
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=1.3e-47 Score=385.12 Aligned_cols=375 Identities=15% Similarity=0.186 Sum_probs=288.3
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhHhCCCCCCCc------HHHHHHHHHHHHhCCCCeee--cCCCceEEEEEcC--CCCce
Q 014449 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFEE------HNTSALIRRELDKLGIPYAY--PVAKTGIVAQIGS--GSRPV 95 (424)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e------~~~~~~l~~~l~~~G~~~~~--~~~~~~v~a~~~~--~~~~~ 95 (424)
..++.+++++++++++++|++|++|||+|+++ +++++||.++|+++||+++. ...++|+++++.+ ..+|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~~~ 84 (464)
T PRK09104 5 LDPVLDHIDANLDASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDAPH 84 (464)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCCCE
Confidence 34588999999999999999999999999764 68899999999999999876 3356789999964 23599
Q ss_pred eEEEeecccCCCCCCCCCccc----cccCC-----ccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-
Q 014449 96 VVLRADMDALPLQELVEWEHK----SKIDG-----KMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE- 162 (424)
Q Consensus 96 ill~~H~DtVp~~~~~~w~~~----~~~~g-----~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE- 162 (424)
|+|+||+||||+++.++|+++ ..+++ ++||||+ ||+++++|+|+++|++.+.+++++|.|+|+++||
T Consensus 85 lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~ 164 (464)
T PRK09104 85 VLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEES 164 (464)
T ss_pred EEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECcccc
Confidence 999999999999887789743 23343 5999997 9999999999999998877889999999999999
Q ss_pred ccCcHHHHHHcCC-CCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEe--CCcccCC-CCCCCCHHHHHHHHH
Q 014449 163 GGAGAFHMIKEGA-LGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEG--RGGHAAM-PHSTIDPILTASSVI 238 (424)
Q Consensus 163 g~~G~~~l~~~~~-~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G--~~~Ha~~-~~~g~nai~~~~~~i 238 (424)
|+.|...++++.. ....|++|+.. ++...+. ....+++++|..+++|+++| +++|+|. ++.+.||+..+++++
T Consensus 165 g~~g~~~~l~~~~~~~~~d~~iv~E--~~~~~~~-~~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l 241 (464)
T PRK09104 165 GSPSLVPFLEANAEELKADVALVCD--TGMWDRE-TPAITTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRIL 241 (464)
T ss_pred CCccHHHHHHhhHHhcCCCEEEEeC--CCCCCCC-CeEEEeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHH
Confidence 6788888877532 11457777642 2211111 11234667899999999999 6899995 789999999999999
Q ss_pred HHHHHhhhcc------------------------------------cCC------------CCCeeEEEEEEecCC----
Q 014449 239 LALQQLISRE------------------------------------ADP------------LQSLVLSVTYVRGGT---- 266 (424)
Q Consensus 239 ~~l~~~~~~~------------------------------------~~~------------~~~~~~~i~~i~gG~---- 266 (424)
.+|++...+. ..| ...++++++.|+||.
T Consensus 242 ~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~ 321 (464)
T PRK09104 242 AGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTGEG 321 (464)
T ss_pred HhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCCCC
Confidence 9997531100 000 013589999999985
Q ss_pred cCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhc
Q 014449 267 AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLL 344 (424)
Q Consensus 267 ~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 344 (424)
..|+||++|++++|+|++|+++.+++.+.|+++++... ..+.++++.. ....+++ +.++++++.+.+++++.+
T Consensus 322 ~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~----~~~~~~~~~~~~~~~v~~l~~~~~~~~ 396 (464)
T PRK09104 322 FKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHD----HGGSPAIALPYDSPALAAAKAALSDEW 396 (464)
T ss_pred CccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEe----cCCCCceECCCCCHHHHHHHHHHHHHh
Confidence 46999999999999999999999999999999987531 1234455443 2233443 566789999999999988
Q ss_pred CCCCcccCCCCCCCC-cHHHHHHh--cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHh
Q 014449 345 GPKNVGEAKKVMAGE-DFAFYQQL--IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 345 g~~~~~~~~~~~g~t-D~~~~~~~--ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~ 416 (424)
|.++.. ...+|++ |++.|.+. +|++.+|+|.. ...+|++||||+++++.+++++|+.++..+++
T Consensus 397 ~~~~~~--~~~~g~~~~~~~~~~~~gip~v~~g~G~~------~~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~~ 463 (464)
T PRK09104 397 GKPAVL--IGSGGSIPIVGDFKRILGMDSLLVGFGLD------DDRIHSPNEKYDLESFHKGIRSWARILAALAE 463 (464)
T ss_pred CCCcee--cCCCCcHHHHHHHHHHhCCCEEEecCCCC------CCCCcCCCCCcCHHHHHHHHHHHHHHHHHhhc
Confidence 876543 2344443 46676653 89888776522 24699999999999999999999999998863
No 33
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=2.9e-47 Score=368.92 Aligned_cols=332 Identities=15% Similarity=0.101 Sum_probs=264.1
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccCCCCCCCCCccc
Q 014449 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHK 116 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~~~ 116 (424)
.+++++++++|++|||++++|.++++|+.++|+++||+++... .+|++++++++ +|+|+|+||+||||... ++
T Consensus 5 ~~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~i~~~~~~-~~~l~~~~H~DtVp~~~----p~- 77 (348)
T PRK04443 5 ALEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVDE-AGNARGPAGDG-PPLVLLLGHIDTVPGDI----PV- 77 (348)
T ss_pred hHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEcCCC-CCEEEEEeeccccCCCC----Cc-
Confidence 4678999999999999999999999999999999999987643 35899998543 48999999999999532 33
Q ss_pred cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCCC
Q 014449 117 SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIP 192 (424)
Q Consensus 117 ~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~~ 192 (424)
.++||++||||+ ||+++++|+|++++ +.+++++|.|++++||| ++.|...++.++. ..|++|+.+ |
T Consensus 78 ~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~E-----p 147 (348)
T PRK04443 78 RVEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGE-----P 147 (348)
T ss_pred EeeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeC-----C
Confidence 357899999996 99999999999998 34789999999999999 5566666666653 567777642 3
Q ss_pred CCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhc---ccCCCCCeeEEEEEEecCCcCc
Q 014449 193 TGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR---EADPLQSLVLSVTYVRGGTAFN 269 (424)
Q Consensus 193 ~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~---~~~~~~~~~~~i~~i~gG~~~n 269 (424)
++.. ..+.+++|..+++++++|+++|+|.| +.||+..+++++.+|+++... .....+..+.+++.|+ ...|
T Consensus 148 t~~~--~i~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n 221 (348)
T PRK04443 148 SGWD--GITLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSD 221 (348)
T ss_pred CCcc--ceeeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCC
Confidence 3321 12456789999999999999999977 799999999999999876431 1112345678888888 4569
Q ss_pred ccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCC
Q 014449 270 IIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPK 347 (424)
Q Consensus 270 ~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~ 347 (424)
+||+.|++.+|+|++|+++.+++.+.|++++. +.++++. ...+++ +.++++++.+++++++..+ +
T Consensus 222 ~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ 288 (348)
T PRK04443 222 GLTVEAEMTVGLRLPPGLSPEEAREILDALLP------TGTVTFT------GAVPAYMVSKRTPLARAFRVAIREAGG-T 288 (348)
T ss_pred CCCceEEEEEEEccCCCCCHHHHHHHHHHhCC------CcEEEEe------cCCCceecCCCCHHHHHHHHHHHHhcC-C
Confidence 99999999999999999999999999999873 2344432 233443 4566799999999999854 3
Q ss_pred CcccCCCCCCCCcHHHHHHh--cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHH
Q 014449 348 NVGEAKKVMAGEDFAFYQQL--IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAET 413 (424)
Q Consensus 348 ~~~~~~~~~g~tD~~~~~~~--ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~ 413 (424)
+. ....+|++|+++|.+. +|++.+| ||+...+|++|||+++++|.+++++|+.++.+
T Consensus 289 ~~--~~~~~g~tD~~~~~~~~gip~v~~G-------pg~~~~~H~~dE~i~i~~l~~~~~~~~~~~~~ 347 (348)
T PRK04443 289 PR--LKRKTGTSDMNVVAPAWGCPMVAYG-------PGDSDLDHTPDEHLPLAEYLRAIAVLTDVLER 347 (348)
T ss_pred cc--eeccccCCcHHHHhhhcCCCEEEEC-------CCCccccCCCcccccHHHHHHHHHHHHHHHhh
Confidence 33 2356789999999863 8988665 55556789999999999999999999999865
No 34
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=8.7e-47 Score=366.84 Aligned_cols=335 Identities=18% Similarity=0.190 Sum_probs=265.6
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhC-CCCeeecCCCceEEEEEcCCCCceeEEEeecccCCCCCCCCCc
Q 014449 36 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKL-GIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE 114 (424)
Q Consensus 36 ~~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~-G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~ 114 (424)
..+++++++++|++|||+|++|.++++||.++|+++ |+++.. .++|++++++++++++|+|+||+||||+.+ .++
T Consensus 5 ~~~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~ 80 (352)
T PRK13007 5 LAADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIR--HGNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLP 80 (352)
T ss_pred hHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEe--cCCeEEEEccCCCCCeEEEEccccccCCCC--CCC
Confidence 356899999999999999999999999999999996 888764 346899999655456899999999999875 455
Q ss_pred cccccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc-c--CcHHHHHHcC-CCCccceeeEecc
Q 014449 115 HKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G--AGAFHMIKEG-ALGDSEAIFGMHI 187 (424)
Q Consensus 115 ~~~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg-~--~G~~~l~~~~-~~~~~~~~i~~~~ 187 (424)
+. .+||++||||+ |++++++|+|++++. ++++++.|+|+++||. + .|++.++... .+.+.|+++..+
T Consensus 81 ~~-~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~e- 154 (352)
T PRK13007 81 SR-REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLE- 154 (352)
T ss_pred cc-eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEec-
Confidence 44 56899999997 999999999999983 4788999999999993 3 5888888653 233577777653
Q ss_pred cCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCC---CCeeEEEEEEec
Q 014449 188 DVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPL---QSLVLSVTYVRG 264 (424)
Q Consensus 188 ~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~---~~~~~~i~~i~g 264 (424)
|++. ....+++|..+++|+++|+++|+|.|+.+.||+..+++++.+++++..+..... ...+++++.|+|
T Consensus 155 ----p~~~---~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~g 227 (352)
T PRK13007 155 ----PTDG---VIEAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISG 227 (352)
T ss_pred ----CCCC---ceEeeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEec
Confidence 2222 123456799999999999999999999999999999999999988653321111 135889999999
Q ss_pred CCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhc
Q 014449 265 GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLL 344 (424)
Q Consensus 265 G~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (424)
|...|+||++|++.+|+|++|+++.+++.++|++.+.... ++++... ..++ ....++++++.+.++ +
T Consensus 228 G~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~-----~~~~~~~---~~~~-~~~~~~~~~~~~~~~----~ 294 (352)
T PRK13007 228 GVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGFA-----EVEVTDL---APGA-RPGLDHPAAAALVAA----V 294 (352)
T ss_pred CCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhcccc-----EEEeecc---cCCC-CCCCCCHHHHHHHHH----h
Confidence 9999999999999999999999999999999998876431 4444320 1222 223466777777765 2
Q ss_pred CCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHH
Q 014449 345 GPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLA 411 (424)
Q Consensus 345 g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l 411 (424)
|.++ ....|++|++++... +|++.+| ||+...+|++||+++++++.+++++|+.++
T Consensus 295 g~~~----~~~~g~td~~~~~~~Gip~v~~G-------pg~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 295 GGEV----RAKYGWTDVARFSALGIPAVNFG-------PGDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred CCCC----ccccccchHHHHHhCCCCEEEeC-------CCchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 5443 245688999999887 9988764 555567999999999999999999999875
No 35
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=8.8e-47 Score=366.27 Aligned_cols=335 Identities=17% Similarity=0.179 Sum_probs=257.7
Q ss_pred hHHHHHHHHHHhHhCCCCC----CCcHHHHHHHHHHHHhCCCCeeec---CCCceEEEEEcCCCCceeEEEeecccCCCC
Q 014449 36 DKDWLVSVRRQIHENPELL----FEEHNTSALIRRELDKLGIPYAYP---VAKTGIVAQIGSGSRPVVVLRADMDALPLQ 108 (424)
Q Consensus 36 ~~~~l~~~l~~l~~ipS~s----~~e~~~~~~l~~~l~~~G~~~~~~---~~~~~v~a~~~~~~~~~ill~~H~DtVp~~ 108 (424)
..+++++++++|++|||.+ ++|.++.+||.++|+ |++++.. +++.|+++..+ +|+|+|+||+||||++
T Consensus 4 ~~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~ 78 (364)
T PRK08737 4 LLESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDS 78 (364)
T ss_pred cHHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCC
Confidence 3557899999999999985 347899999999997 9987763 24568888642 2789999999999987
Q ss_pred CCCCCcc---c-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-cc-CcHHHHHHcCCCCcc
Q 014449 109 ELVEWEH---K-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GG-AGAFHMIKEGALGDS 179 (424)
Q Consensus 109 ~~~~w~~---~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~-~G~~~l~~~~~~~~~ 179 (424)
+ .|++ . ..+||++||||+ ||+++++|.|++. +.++|.|+|++||| |+ .|++.+++.+. +.
T Consensus 79 ~--~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~ 147 (364)
T PRK08737 79 P--HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PY 147 (364)
T ss_pred C--CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CC
Confidence 5 6864 3 467899999997 9999999999863 35689999999999 55 68889988864 45
Q ss_pred ceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCC-CCCCCHHHHHHHHHHHHHHhhhcc----cCCCCC
Q 014449 180 EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMP-HSTIDPILTASSVILALQQLISRE----ADPLQS 254 (424)
Q Consensus 180 ~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~-~~g~nai~~~~~~i~~l~~~~~~~----~~~~~~ 254 (424)
+++|.. +|++.. ...+++|..+++|+++|+++|+|.| +.|.|||..+++++.++.+..... .++...
T Consensus 148 ~~~iv~-----Ept~~~---~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~ 219 (364)
T PRK08737 148 EAVLVA-----EPTMSE---AVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTG 219 (364)
T ss_pred CEEEEc-----CCCCce---eEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCC
Confidence 766653 344431 2456789999999999999999987 589999999999998876543221 112235
Q ss_pred eeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCC-HHHH
Q 014449 255 LVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVND-DSLH 333 (424)
Q Consensus 255 ~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 333 (424)
.+++++.|+||...|+||++|++++|+|+.|+++.+++.+.|+++++.. ..+++.... ...+++...+ .+++
T Consensus 220 ~t~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~ 292 (364)
T PRK08737 220 LRFNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEPA----AATFEETFR---GPSLPSGDIARAEER 292 (364)
T ss_pred CceEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHHc----CCceEEEec---cCCCCCcccCcchHH
Confidence 6999999999999999999999999999999999999999998776642 233443321 2234444322 2445
Q ss_pred HHH-HHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHH
Q 014449 334 LLV-ERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLA 411 (424)
Q Consensus 334 ~~~-~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l 411 (424)
..+ ..+.++. |.+.. ...+++||+++|... +|++.+| ||+...+|++||||++++|.+++++|..++
T Consensus 293 ~~~~~~~~~~~-~~~~~---~~~~~~tDa~~~~~~Gip~v~~G-------pG~~~~aHt~dE~i~i~~l~~~~~~~~~~~ 361 (364)
T PRK08737 293 RLAARDVADAL-DLPIG---NAVDFWTEASLFSAAGYTALVYG-------PGDIAQAHTADEFVTLDQLQRYAESVHRII 361 (364)
T ss_pred HHHHHHHHhhh-cCCCC---ceeccccCHHHHHHcCCCEEEEC-------CCChhhccCCCcceeHHHHHHHHHHHHHHh
Confidence 444 4444443 76542 245678999999887 9998875 555567999999999999999999999987
Q ss_pred H
Q 014449 412 E 412 (424)
Q Consensus 412 ~ 412 (424)
.
T Consensus 362 ~ 362 (364)
T PRK08737 362 N 362 (364)
T ss_pred c
Confidence 5
No 36
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=1.2e-46 Score=367.16 Aligned_cols=331 Identities=18% Similarity=0.164 Sum_probs=253.0
Q ss_pred HHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCC-eeecCCCceEEEEEcCCCCceeEEEeecccCCCCCC--CCCcc----
Q 014449 43 VRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQEL--VEWEH---- 115 (424)
Q Consensus 43 ~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~--~~w~~---- 115 (424)
++++|++|||+|++|.++++||.++|+++|++ ++....+.|++++++++++++|+|+||+||||+++. ..|++
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 47899999999999999999999999999654 222222458999986544588999999999998752 35753
Q ss_pred --------ccccCCccccCCc---hHHHHHHHHHHHHHHh--ccCCCCceEEEEeeecCCc-c--CcHHHHHHcCC-CCc
Q 014449 116 --------KSKIDGKMHACGH---DVHTTMLLGAAKLIHQ--RKDKLKGTVRILFQPAEEG-G--AGAFHMIKEGA-LGD 178 (424)
Q Consensus 116 --------~~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~--~~~~~~~~l~~~~~~~EEg-~--~G~~~l~~~~~-~~~ 178 (424)
..++||++||||+ ||+++++|+|++++++ .+..++++|.|+|+++||. + .|+..+++... +..
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 2467899999997 9999999999999954 3557889999999999994 2 59999987642 224
Q ss_pred cceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhccc--CC-CCCe
Q 014449 179 SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA--DP-LQSL 255 (424)
Q Consensus 179 ~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~--~~-~~~~ 255 (424)
.|++|+.. |++. ....+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++..+.. ++ ....
T Consensus 161 ~d~~iv~E-----pt~~---~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIGE-----PTGG---GIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEEC-----CCCC---cccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 67666532 3332 234567899999999999999999999999999999999999988643221 11 1246
Q ss_pred eEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHH--------HHHH---cC-CeEEEEeeccCCCCC
Q 014449 256 VLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQ--------QAAV---HS-CNAFIDLKEEEHPPY 323 (424)
Q Consensus 256 ~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~--------~~~~---~~-~~~~~~~~~~~~~~~ 323 (424)
+++++.|+||...|+||++|++++|+|+.|+++.+++.+.|+++++. .... .+ ..++++. ....
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 308 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAM----EDEA 308 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEE----cccC
Confidence 89999999999999999999999999999999999999999765422 2211 11 1233332 1111
Q ss_pred Cc--ccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCC
Q 014449 324 PA--TVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLD 396 (424)
Q Consensus 324 ~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~ 396 (424)
++ .+.+.++++.+.+++++.+|.++. ...|+||+++|... +|++.+| ||+..++|++|||++
T Consensus 309 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~~G-------pg~~~~aH~~dE~v~ 373 (373)
T TIGR01900 309 GGALPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALNFG-------AGDPLFAHKHDEQCP 373 (373)
T ss_pred CCCCCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEEeC-------CCChhhccCCCCCCC
Confidence 11 234667888999999988787653 35688999999876 9998765 666668999999985
No 37
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=9.7e-47 Score=375.23 Aligned_cols=358 Identities=15% Similarity=0.169 Sum_probs=267.7
Q ss_pred HHHHHHHhHhCCCCC------CCcHHHHHHHHHHHHhCCCCeeec---CCCceEEEEEcCC-C-CceeEEEeecccCCCC
Q 014449 40 LVSVRRQIHENPELL------FEEHNTSALIRRELDKLGIPYAYP---VAKTGIVAQIGSG-S-RPVVVLRADMDALPLQ 108 (424)
Q Consensus 40 l~~~l~~l~~ipS~s------~~e~~~~~~l~~~l~~~G~~~~~~---~~~~~v~a~~~~~-~-~~~ill~~H~DtVp~~ 108 (424)
+++++++|++|||++ .+|.++++||.++|+++||+++.. +.++|+++++++. + .++|+|+||+||||++
T Consensus 1 ~~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~ 80 (426)
T PRK07906 1 VVDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAE 80 (426)
T ss_pred ChHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCC
Confidence 368999999999998 678999999999999999998763 3567999999543 2 4789999999999987
Q ss_pred CCCCCccc----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc-c-CcHHHHHHcC--CCC
Q 014449 109 ELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G-AGAFHMIKEG--ALG 177 (424)
Q Consensus 109 ~~~~w~~~----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg-~-~G~~~l~~~~--~~~ 177 (424)
+. +|.++ .++||++||||+ ||+++++|+|++++++.+..++++|.|+|+++||. + .|++.++++. .+.
T Consensus 81 ~~-~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~ 159 (426)
T PRK07906 81 AA-DWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFE 159 (426)
T ss_pred cc-cCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhcc
Confidence 64 79643 467899999996 99999999999999998888999999999999994 4 5899998753 222
Q ss_pred ccceeeEecccC--CCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcc-------
Q 014449 178 DSEAIFGMHIDV--GIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE------- 248 (424)
Q Consensus 178 ~~~~~i~~~~~~--~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~------- 248 (424)
..++++...... ..+........+.+++|..+++|+++|+++|++.|+. .||+..++++|.+|++...+.
T Consensus 160 ~~~~ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~ 238 (426)
T PRK07906 160 GVTEAISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVR 238 (426)
T ss_pred chheEEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHH
Confidence 344555432110 0011101112356678999999999999999999864 999999999999997542110
Q ss_pred -------------cCCC-------------------CCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHH
Q 014449 249 -------------ADPL-------------------QSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRL 296 (424)
Q Consensus 249 -------------~~~~-------------------~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i 296 (424)
.++. ..++++++.|+||...|+||++|++.+|+|++|+++ +++.+.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i 317 (426)
T PRK07906 239 AFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATV 317 (426)
T ss_pred HHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHH
Confidence 0010 035999999999999999999999999999999886 5566666
Q ss_pred HHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcC-CCCcccCCCCCCCCcHHHHHHh-cceEE
Q 014449 297 KEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLG-PKNVGEAKKVMAGEDFAFYQQL-IPGVM 372 (424)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~g~tD~~~~~~~-ip~~~ 372 (424)
++++. ..++++. ...++++ +.++++++.+++++++.++ ..+. ....+|+||+++|... +|++.
T Consensus 318 ~~~~~-------~~v~~~~----~~~~~~~~~~~~~~~v~~l~~a~~~~~~~~~~~--~~~~~ggtDa~~~~~~g~p~~~ 384 (426)
T PRK07906 318 DELLG-------PDVEREW----VHRDPALETPFDGPLVDAMNAALLAEDPGARVV--PYMLSGGTDAKAFSRLGIRCYG 384 (426)
T ss_pred HHHhC-------CCeEEEE----ecCCCCCCCCCCcHHHHHHHHHHHHHCCCCeEe--eeeecccCcHHHHHhcCCceEE
Confidence 66542 2344444 2233443 4567899999999998743 2222 2345678999999877 88776
Q ss_pred EEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHH
Q 014449 373 LSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAET 413 (424)
Q Consensus 373 ~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~ 413 (424)
++++....+++....+|++||++++++|.+++++|+.++..
T Consensus 385 ~gp~~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 385 FAPLRLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred EeccccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 65432110000125699999999999999999999998864
No 38
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=1.6e-46 Score=375.80 Aligned_cols=358 Identities=15% Similarity=0.087 Sum_probs=271.4
Q ss_pred HHHHHHhhHHHHHHHHHHhHhCCCCCCC------------cHHHHHHHHHHHHhCCCCeeecCCCceEEEEE-cCCCCce
Q 014449 29 VMISAQQDKDWLVSVRRQIHENPELLFE------------EHNTSALIRRELDKLGIPYAYPVAKTGIVAQI-GSGSRPV 95 (424)
Q Consensus 29 ~~~~~~~~~~~l~~~l~~l~~ipS~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~-~~~~~~~ 95 (424)
+.+.+++++++++++|++|++|||++.+ ++++.+|+.++|+++||+++..+ |.++.+ .++++++
T Consensus 4 ~~~~i~~~~~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~~~ 80 (466)
T TIGR01886 4 FKEEVEARKDALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGDER 80 (466)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCCCE
Confidence 5677888899999999999999999753 46688999999999999987633 233333 2233489
Q ss_pred eEEEeecccCCCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcH
Q 014449 96 VVLRADMDALPLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGA 167 (424)
Q Consensus 96 ill~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~ 167 (424)
|+|+||+||||+++ .|. |. .++||++||||+ ||+++++|+|+++|++.+.+++++|.|+++++|| |+.|+
T Consensus 81 l~~~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~ 158 (466)
T TIGR01886 81 LGIIGHMDVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDM 158 (466)
T ss_pred EEEEeecccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccH
Confidence 99999999999974 686 43 467899999997 9999999999999999998999999999999999 67899
Q ss_pred HHHHHcCCCCccceeeEecccC----CCCCCceeee-------------------------------c------------
Q 014449 168 FHMIKEGALGDSEAIFGMHIDV----GIPTGSIASI-------------------------------S------------ 200 (424)
Q Consensus 168 ~~l~~~~~~~~~~~~i~~~~~~----~~~~g~~~~~-------------------------------~------------ 200 (424)
+++++++. ..|+++..+.+. +++ |....+ .
T Consensus 159 ~~~~~~~~--~~d~~~~~d~~~~~~~ge~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~ 235 (466)
T TIGR01886 159 DYYFKHEE--TPDFGFSPDAEFPIINGEK-GNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAA 235 (466)
T ss_pred HHHHhcCc--CCCEEEECCCCceeEEEec-ceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHH
Confidence 99998764 245544322110 001 111100 0
Q ss_pred ---Ccccccee---------EEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHH----------HHhhh---c--------
Q 014449 201 ---GPHLAATS---------VFNVKVEGRGGHAAMPHSTIDPILTASSVILAL----------QQLIS---R-------- 247 (424)
Q Consensus 201 ---g~~~~g~~---------~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l----------~~~~~---~-------- 247 (424)
...++|.. |++|+++|+++|+|.|+.|+|||..+++++.++ +.+.. .
T Consensus 236 ~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 315 (466)
T TIGR01886 236 YESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLG 315 (466)
T ss_pred HHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCC
Confidence 01233433 789999999999999999999999999988873 22210 0
Q ss_pred --ccC-CCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCC
Q 014449 248 --EAD-PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYP 324 (424)
Q Consensus 248 --~~~-~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (424)
..+ ..+..|+|++.|+||.. | ++|++.+|+|++|+++.+++.++|++.+.. ..++++.. ....|
T Consensus 316 ~~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~~~~----~~~~P 382 (466)
T TIGR01886 316 IAFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVTYNG----HFEEP 382 (466)
T ss_pred CcccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEEEec----ccCCC
Confidence 011 24567999999999865 3 799999999999999999999999988864 23444321 11111
Q ss_pred -cccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEecccCCCCCCCCCCCCCCccCCCCchHHH
Q 014449 325 -ATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIG 403 (424)
Q Consensus 325 -~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~ 403 (424)
..+.++++++.+.+++++.+|.++.. ...+|+||+++|...+|...+| ||+...+|++||||++++|.++
T Consensus 383 ~~~~~ds~lv~~l~~a~~~v~G~~~~~--~~~~ggTDa~~~~~~i~~gv~g-------PG~~~~aH~~dE~V~i~el~~a 453 (466)
T TIGR01886 383 HYVPGSDPLVQTLLKVYEKHTGKKGHE--VIIGGGTYGRLLERGVAYGAMF-------EGGPDVMHQANEFMMLDDLILA 453 (466)
T ss_pred cccCCCCHHHHHHHHHHHHHhCCCCce--eeecCccHHHhccccccccccc-------CCCCCCccCCCcceEHHHHHHH
Confidence 23445689999999999988876542 3678999999998657655543 6777789999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 014449 404 AALYTNLAETYLN 416 (424)
Q Consensus 404 ~~~~a~~l~~~~~ 416 (424)
+++|+.++.+||.
T Consensus 454 ~~iy~~~i~~l~~ 466 (466)
T TIGR01886 454 AAIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999873
No 39
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=1.2e-46 Score=366.93 Aligned_cols=341 Identities=19% Similarity=0.194 Sum_probs=278.3
Q ss_pred HHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecC------CCceEEEEEcCC-CCceeEEEeecccCCCCCCC
Q 014449 39 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV------AKTGIVAQIGSG-SRPVVVLRADMDALPLQELV 111 (424)
Q Consensus 39 ~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~~v~a~~~~~-~~~~ill~~H~DtVp~~~~~ 111 (424)
++++++++|++|||++++|.++++||.++|+++||+++... .++|++++++++ ++|+|+|.||+||||.++
T Consensus 1 ~~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~-- 78 (361)
T TIGR01883 1 RLKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA-- 78 (361)
T ss_pred ChHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--
Confidence 36789999999999999999999999999999999987632 368999999654 348999999999999765
Q ss_pred CCccccccCCccccCCc-------hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceee
Q 014449 112 EWEHKSKIDGKMHACGH-------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIF 183 (424)
Q Consensus 112 ~w~~~~~~~g~l~GrG~-------Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i 183 (424)
.|.. ..++|++||||+ |++++++|++++.|++.+ .++++|.|+|+++|| ++.|++.+.+.+. ..++.+
T Consensus 79 ~~~~-~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~ 154 (361)
T TIGR01883 79 GPEP-VVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGY 154 (361)
T ss_pred CCCc-eecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeE
Confidence 4542 356799999983 799999999999998866 578899999999999 6679988876432 234444
Q ss_pred EecccCCCCCCceeeecCccccceeEEEEEEEeCCcccC-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEE
Q 014449 184 GMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYV 262 (424)
Q Consensus 184 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~-~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i 262 (424)
.. +++.+.+.+ ..+++|..+++++++|+++|++ .|+.|+||+..+++++.+|+... .....+++++.+
T Consensus 155 ~~--~~~~~~~~i----~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~-----~~~~~~~~i~~i 223 (361)
T TIGR01883 155 CL--DAPGEVGNI----QLAAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR-----IDEETTANIGSF 223 (361)
T ss_pred EE--eCCCCcceE----EecCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC-----CCCcccccccee
Confidence 43 332222332 2345689999999999999986 79999999999999999886531 112367899999
Q ss_pred ecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHH
Q 014449 263 RGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVG 340 (424)
Q Consensus 263 ~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 340 (424)
+||...|+||++|++.+++|..+..+.+++.++|++.++..+...+.+++++. ...++++ ..++++++.+++++
T Consensus 224 ~gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~lv~~l~~a~ 299 (361)
T TIGR01883 224 SGGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEET----RLIYEGFKIHPQHPLMNIFKKAA 299 (361)
T ss_pred ecCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEE----EeccccccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988777888887765 3344454 45678999999999
Q ss_pred HhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHH
Q 014449 341 KSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLA 411 (424)
Q Consensus 341 ~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l 411 (424)
++. |.++.. ...+|++|+++|... +|++++|+| . ..+|++||+++++++.+++++|..++
T Consensus 300 ~~~-g~~~~~--~~~~g~tD~~~~~~~giP~v~~G~g-------~-~~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 300 KKI-GLKTSE--IFSGGGSDANVLNEKGVPTVNLSAG-------Y-VHAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred HHc-CCCcEE--EecCcccHHHHHhhCCCceEEECCC-------c-ccCcCcceeEEHHHHHHHHHHHHHHh
Confidence 985 877643 367899999999977 999887644 3 46999999999999999999999876
No 40
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=3e-46 Score=375.42 Aligned_cols=372 Identities=14% Similarity=0.081 Sum_probs=276.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhHhCCCCCCC---cHHHHHHHH----HHHHhCCCCeeec-----CCCceEEEEEcCC-C
Q 014449 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFE---EHNTSALIR----RELDKLGIPYAYP-----VAKTGIVAQIGSG-S 92 (424)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~---e~~~~~~l~----~~l~~~G~~~~~~-----~~~~~v~a~~~~~-~ 92 (424)
.+++.++++. +++++++++|++|||+|++ +.++++||. ++|+++||+++.. ++++|++++++++ +
T Consensus 7 ~~~~~~~~~~--~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~~ 84 (469)
T PRK07079 7 IARAAAYFDS--GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDDA 84 (469)
T ss_pred HHHHHHhhcc--HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCCC
Confidence 3455555553 4799999999999999974 456777764 5899999998762 2467999998543 4
Q ss_pred CceeEEEeecccCCCCCCCCCc-----cc-cccCCccccCCc---hHHHHHHHHHHHHHHhc-cCCCCceEEEEeeecCC
Q 014449 93 RPVVVLRADMDALPLQELVEWE-----HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQR-KDKLKGTVRILFQPAEE 162 (424)
Q Consensus 93 ~~~ill~~H~DtVp~~~~~~w~-----~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~-~~~~~~~l~~~~~~~EE 162 (424)
+|+|+|+||+||||.++ ..|+ |. .++||++||||+ ||+++++|+|++++++. +.+++++|.|++++|||
T Consensus 85 ~~~lll~gH~DvVp~~~-~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE 163 (469)
T PRK07079 85 LPTVLIYGHGDVVRGYD-EQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEE 163 (469)
T ss_pred CCEEEEEcccCCCCCCh-HHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccc
Confidence 58999999999999764 3675 32 467999999997 99999999999998653 46889999999999999
Q ss_pred -ccCcHHHHHHcCC-CCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeC--CcccCC-CCCCCCHHHHHHHH
Q 014449 163 -GGAGAFHMIKEGA-LGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGR--GGHAAM-PHSTIDPILTASSV 237 (424)
Q Consensus 163 -g~~G~~~l~~~~~-~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~--~~Ha~~-~~~g~nai~~~~~~ 237 (424)
|+.|++.++++.. ....|++|+.......+ +.. ..+++++|..+++|+++|+ +.|++. ...+.||+..++.+
T Consensus 164 ~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~-~~~--~i~~g~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~l~~a 240 (469)
T PRK07079 164 IGSPGLAEVCRQHREALAADVLIASDGPRLSA-ERP--TLFLGSRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTVLAHA 240 (469)
T ss_pred cCCccHHHHHHHhHHhcCCCEEEEeCCCccCC-CCe--EEEEecceEEEEEEEEeeCCCCCCCCccccccCCHHHHHHHH
Confidence 7789999998752 11357777642211111 111 1346688999999999998 446663 23347999999999
Q ss_pred HHHHHHhhhcc------------------------c--------------------CCCCCeeEEEEEEecCC---cCcc
Q 014449 238 ILALQQLISRE------------------------A--------------------DPLQSLVLSVTYVRGGT---AFNI 270 (424)
Q Consensus 238 i~~l~~~~~~~------------------------~--------------------~~~~~~~~~i~~i~gG~---~~n~ 270 (424)
|.++.+...+. . ......++|++.|+||. ..|+
T Consensus 241 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~Nv 320 (469)
T PRK07079 241 IASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVNA 320 (469)
T ss_pred HHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcceE
Confidence 99985421000 0 00123589999999984 6899
Q ss_pred cCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCCC
Q 014449 271 IPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPKN 348 (424)
Q Consensus 271 vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~ 348 (424)
||++|++++|+|++|+++.+++.++|+++++... ...++++. ....+++ +.++++++.+.+++++.+|.++
T Consensus 321 VP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~---~~~v~~~~----~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~ 393 (469)
T PRK07079 321 IPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHG---FPMVEVTV----ERGSPATRLDPDDPWVRWALASIARTTGKKP 393 (469)
T ss_pred ecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC---CCCeEEEE----eCCCCceecCCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999988642 11345544 3333443 4567899999999999878765
Q ss_pred cccCCCCCCCCcHHHHHH-h-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 349 VGEAKKVMAGEDFAFYQQ-L-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 349 ~~~~~~~~g~tD~~~~~~-~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
... ...+|++|.++|.. . +|+++++++ + ||+ ..|++||||+++++.+++++|+.++.+|++.
T Consensus 394 ~~~-~~~~g~~d~~~~~~~~giP~v~~g~~--~--~~~--~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~ 457 (469)
T PRK07079 394 ALL-PNLGGSLPNDVFADILGLPTLWVPHS--Y--PAC--SQHAPNEHLLASVAREGLQIMAGLFWDLGEQ 457 (469)
T ss_pred cee-cCCCcchhHHHHHHHhCCCEEEecCC--C--CCc--cCcCCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 432 24566779888876 4 998855322 2 332 4799999999999999999999999999764
No 41
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-45 Score=363.44 Aligned_cols=371 Identities=23% Similarity=0.321 Sum_probs=285.3
Q ss_pred HHHHHhhHHHHHHHHHHhHhCCCCC-CCcHHHHHHHHHHHHhCCCCeeecC-C----CceEEEEEcCCCC-ceeEEEeec
Q 014449 30 MISAQQDKDWLVSVRRQIHENPELL-FEEHNTSALIRRELDKLGIPYAYPV-A----KTGIVAQIGSGSR-PVVVLRADM 102 (424)
Q Consensus 30 ~~~~~~~~~~l~~~l~~l~~ipS~s-~~e~~~~~~l~~~l~~~G~~~~~~~-~----~~~v~a~~~~~~~-~~ill~~H~ 102 (424)
.......++++++++++|++|||++ ..+.++++|+.++|+++|+.++... . .+|++++++++.+ |+|+|+||+
T Consensus 5 ~~~~~~~~~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~ 84 (409)
T COG0624 5 LEVSLDLLDDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHL 84 (409)
T ss_pred HHHHHHhhHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccc
Confidence 3444455778889999999999999 8899999999999999999877622 2 4589999977644 899999999
Q ss_pred ccCCCCCCCCCcc---c-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcC
Q 014449 103 DALPLQELVEWEH---K-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEG 174 (424)
Q Consensus 103 DtVp~~~~~~w~~---~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~ 174 (424)
||||+++...|++ . ..+||++||||+ ||+++++++|++.+.+.+..++++|.+++++||| ++.++..++.++
T Consensus 85 DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~ 164 (409)
T COG0624 85 DVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEG 164 (409)
T ss_pred cccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhc
Confidence 9999998778964 3 456799999997 9999999999999999888999999999999999 668888888776
Q ss_pred CC---CccceeeEecccCC--CCCCceeeecCccccceeEEEEEEEeCCcccCC--CCCCCCHHHHHHHHHHHHHHhhhc
Q 014449 175 AL---GDSEAIFGMHIDVG--IPTGSIASISGPHLAATSVFNVKVEGRGGHAAM--PHSTIDPILTASSVILALQQLISR 247 (424)
Q Consensus 175 ~~---~~~~~~i~~~~~~~--~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~--~~~g~nai~~~~~~i~~l~~~~~~ 247 (424)
.. ...|+++.. ++. ...+.... .+++|..+++|+++|+++|+|. |+.+.|++..+.+.+.++.....+
T Consensus 165 ~~~~~~~~d~~i~~--E~~~~~~~~~~~~---~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~ 239 (409)
T COG0624 165 EEALGIRPDYEIVG--EPTLESEGGDIIV---VGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGD 239 (409)
T ss_pred chhhccCCCEEEeC--CCCCcccCCCeEE---EcceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcc
Confidence 42 345665543 331 11222222 2567999999999999999997 999999555555555544433222
Q ss_pred ccCC-CC-CeeEEEEEEecCCc--------CcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeec
Q 014449 248 EADP-LQ-SLVLSVTYVRGGTA--------FNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKE 317 (424)
Q Consensus 248 ~~~~-~~-~~~~~i~~i~gG~~--------~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 317 (424)
...+ .. ..+++++.+.++.. .|+||++|++.+|+|+.|.++.+++.++|+..++......+.++++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~-- 317 (409)
T COG0624 240 LAGEGFDGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEP-- 317 (409)
T ss_pred cccccccCCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEecc--
Confidence 2221 12 35667776665554 599999999999999999999999999999999876544456666652
Q ss_pred cCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCC
Q 014449 318 EEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLD 396 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~ 396 (424)
.......+.+.++++++.+..++++.+|.+... ...++++|+.++... +|.+.+ | ||..+.+|++|||++
T Consensus 318 ~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~~~--~~~G~~~da~~~~~~~~~~~~f--g-----p~~~~~~H~~~E~v~ 388 (409)
T COG0624 318 GLGEPPLPVPGDSPLVAALAEAAEELLGLPPEV--STGGGTHDARFFARLGIPAVIF--G-----PGDIGLAHQPNEYVE 388 (409)
T ss_pred ccCCccccCCCchHHHHHHHHHHHHhhCCCcee--cCCCCcchHHHHHhcCCeeEEE--C-----CCCcccccCCCceee
Confidence 002333345667789999999999977876332 344466899999888 684444 5 666678999999999
Q ss_pred CCchHHHHHHHHHHHHHHHh
Q 014449 397 EDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 397 ~~~l~~~~~~~a~~l~~~~~ 416 (424)
++++.+++++|+.++.+++.
T Consensus 389 i~~l~~~~~~~~~~l~~l~~ 408 (409)
T COG0624 389 LEDLVKGAKVLARLLYELAE 408 (409)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999875
No 42
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=1.4e-45 Score=364.17 Aligned_cols=348 Identities=15% Similarity=0.121 Sum_probs=272.8
Q ss_pred HHHHHHHHhHhCCCCCCC----------cHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC-CC-ceeEEEeecccCC
Q 014449 39 WLVSVRRQIHENPELLFE----------EHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SR-PVVVLRADMDALP 106 (424)
Q Consensus 39 ~l~~~l~~l~~ipS~s~~----------e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~-~~-~~ill~~H~DtVp 106 (424)
++++.+.++++|||+|++ +.++++||.++|+++|++.+..+..+|+++++++. ++ |+|+|+||+||||
T Consensus 2 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp 81 (404)
T PRK13381 2 QLTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVD 81 (404)
T ss_pred cHHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCC
Confidence 367889999999999973 78899999999999999655455778999999643 44 8999999999999
Q ss_pred CCCCC--CCc---cc------------------------cccCCccccCCc-------hHHHHHHHHHHHHHHhccCCCC
Q 014449 107 LQELV--EWE---HK------------------------SKIDGKMHACGH-------DVHTTMLLGAAKLIHQRKDKLK 150 (424)
Q Consensus 107 ~~~~~--~w~---~~------------------------~~~~g~l~GrG~-------Kg~~a~~l~a~~~l~~~~~~~~ 150 (424)
+++.. .|. |. ..++|++||||+ ||+++++|.|+++|++.+ .+.
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~ 160 (404)
T PRK13381 82 VGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEH 160 (404)
T ss_pred ccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCC
Confidence 87520 111 11 124678999884 999999999999998775 568
Q ss_pred ceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccC-CCCCCC
Q 014449 151 GTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTI 228 (424)
Q Consensus 151 ~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~-~~~~g~ 228 (424)
++|.|+|+++|| |+.|++.++.++. ..|+++..|. +.+.+. ..+++|..+++|+++|+++|++ .|+.|.
T Consensus 161 g~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~--~~~~~i-----~~~~~G~~~~~v~v~Gk~aHa~~~p~~g~ 231 (404)
T PRK13381 161 GDIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDC--CELGEV-----VYENFNAASAEITITGVTAHPMSAKGVLV 231 (404)
T ss_pred CCEEEEEEcccccccccHHHHHHhcC--CCCEEEEecC--CCcceE-----EEecCcceEEEEEEEeEecCCCCCcccCc
Confidence 899999999999 5689999987643 3676666543 234322 2345789999999999999988 488899
Q ss_pred CHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcC
Q 014449 229 DPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHS 308 (424)
Q Consensus 229 nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~ 308 (424)
|||..+++++.+|+++..+........+++++.++|+ |++|++.+|+|+.+.++.+++.+.|+++++..+...+
T Consensus 232 NAI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~ 305 (404)
T PRK13381 232 NPILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYP 305 (404)
T ss_pred CHHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999876433222222346778877764 8999999999999999999999999999999877766
Q ss_pred -CeEEEEeeccCCCCCC--cccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCC
Q 014449 309 -CNAFIDLKEEEHPPYP--ATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGS 384 (424)
Q Consensus 309 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~ 384 (424)
+++++++.. ....+ ....++++++.+.+++++. |.++.. ...+|++|+++|... +|++++|+| .
T Consensus 306 ~~~~~~~~~~--~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~~--~~~~g~tDa~~~~~~giP~v~~GpG-------~ 373 (404)
T PRK13381 306 TARVSLTLTD--QYSNISNSIKDDRRAVDLAFDAMKEL-GIEPKV--IPMRGGTDGAALSAKGLPTPNLFTG-------A 373 (404)
T ss_pred CcEEEEEEEe--CCchhhcccccCHHHHHHHHHHHHHc-CCCeee--ccCCccchHHHHhcCCCCeEEECcc-------c
Confidence 566665411 11112 2456788999999999886 876543 356789999999877 999998755 3
Q ss_pred CCCCCCCCccCCCCchHHHHHHHHHHHHHHH
Q 014449 385 IHPPHSPYFFLDEDVLPIGAALYTNLAETYL 415 (424)
Q Consensus 385 ~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~ 415 (424)
..+|++||||++++|.+++++|+.++..+.
T Consensus 374 -~~aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 374 -HNFHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred -cCCcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 348999999999999999999999988764
No 43
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=9.6e-46 Score=371.25 Aligned_cols=360 Identities=16% Similarity=0.165 Sum_probs=270.8
Q ss_pred HHHHHHHhhHHHHHHHHHHhHhCCCCCCC------------cHHHHHHHHHHHHhCCCCeeecCCCceEEEEEc-CCCCc
Q 014449 28 QVMISAQQDKDWLVSVRRQIHENPELLFE------------EHNTSALIRRELDKLGIPYAYPVAKTGIVAQIG-SGSRP 94 (424)
Q Consensus 28 ~~~~~~~~~~~~l~~~l~~l~~ipS~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~-~~~~~ 94 (424)
++.+++++++++++++|++|++|||++++ ++++++|+.++|+++||+++..+ |+++++. ++.++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---n~~~~~~~~~~~~ 80 (466)
T PRK07318 4 DWKKEVEKRKDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---NYAGHIEYGEGEE 80 (466)
T ss_pred hHHHHHHHhHHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec---CccceEEECCCCC
Confidence 47888899999999999999999999965 46899999999999999987542 4555542 22348
Q ss_pred eeEEEeecccCCCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCc
Q 014449 95 VVVLRADMDALPLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAG 166 (424)
Q Consensus 95 ~ill~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G 166 (424)
+|+|+||+||||+++ .|+ |. ..+||++||||+ ||+++++++|++.|++.+..++++|.|+|++||| |+.|
T Consensus 81 ~l~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G 158 (466)
T PRK07318 81 VLGILGHLDVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKC 158 (466)
T ss_pred EEEEEEecCCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchh
Confidence 999999999999875 685 43 457899999996 9999999999999999888889999999999999 6789
Q ss_pred HHHHHHcCCCCc----cc----eeeEec----------------------ccCCCCCCce------eee-----------
Q 014449 167 AFHMIKEGALGD----SE----AIFGMH----------------------IDVGIPTGSI------ASI----------- 199 (424)
Q Consensus 167 ~~~l~~~~~~~~----~~----~~i~~~----------------------~~~~~~~g~~------~~~----------- 199 (424)
++++++...... .| ++++.. .+++.+++.+ ...
T Consensus 159 ~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~ 238 (466)
T PRK07318 159 MDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAF 238 (466)
T ss_pred HHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHHH
Confidence 999998643211 11 111110 0011111110 000
Q ss_pred ----cCccccce-----eEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHh------h----h--------------
Q 014449 200 ----SGPHLAAT-----SVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQL------I----S-------------- 246 (424)
Q Consensus 200 ----~g~~~~g~-----~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~------~----~-------------- 246 (424)
...+++|. .|++|+++|+++|++.|+.|.|||..++++|.+|+.. . .
T Consensus 239 ~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (466)
T PRK07318 239 EAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIA 318 (466)
T ss_pred HHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCc
Confidence 00134454 3799999999999999999999999999999998641 0 0
Q ss_pred cccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCc-
Q 014449 247 READPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPA- 325 (424)
Q Consensus 247 ~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 325 (424)
......+..++|++.|+||... .|++.+|+|++|+++.+++.+.|++.++.. + ++++. ...+++
T Consensus 319 ~~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~~----~--~~~~~----~~~~~p~ 383 (466)
T PRK07318 319 YEDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGVT----G--VELSE----HEHQKPH 383 (466)
T ss_pred ccCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHhc----C--eEEEE----ccCCCce
Confidence 0011124569999999998432 799999999999999999999999987652 3 44443 333444
Q ss_pred -ccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHH
Q 014449 326 -TVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGA 404 (424)
Q Consensus 326 -~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~ 404 (424)
.+.++++++.+++++++.+|.++.. ...+|++|++++...+| +|+.+ ||+...+|++||+++++++.+++
T Consensus 384 ~~~~d~~lv~~l~~a~~~~~g~~~~~--~~~~ggtDa~~~~~~i~-----~Gp~~--pg~~~~aH~~dE~v~i~~l~~~~ 454 (466)
T PRK07318 384 YVPKDDPLVKTLLKVYEKQTGLKGEE--QVIGGGTYARLLKRGVA-----FGAMF--PGSEDTMHQANEYIEIDDLIKAA 454 (466)
T ss_pred eeCCCCHHHHHHHHHHHHHhCCCCCe--eEEcchHhHhhCCCeEE-----eCCCC--CCCCCCCcCCCcceeHHHHHHHH
Confidence 3457789999999999877877542 35678899998864333 34433 66667799999999999999999
Q ss_pred HHHHHHHHHHHh
Q 014449 405 ALYTNLAETYLN 416 (424)
Q Consensus 405 ~~~a~~l~~~~~ 416 (424)
++|+.++.++++
T Consensus 455 ~v~~~~l~~~~~ 466 (466)
T PRK07318 455 AIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHhC
Confidence 999999998863
No 44
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=6.2e-45 Score=361.00 Aligned_cols=347 Identities=17% Similarity=0.172 Sum_probs=273.8
Q ss_pred HHHHHHHHHHhHhCCC---------CCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC-CCceeEEEeecccCC
Q 014449 37 KDWLVSVRRQIHENPE---------LLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVVLRADMDALP 106 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS---------~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~-~~~~ill~~H~DtVp 106 (424)
.+++++++.+|++|+| .+++|.++++||.++|+++|++++.. ..+|+++++++. ++|+|+|.||+||||
T Consensus 9 ~~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp 87 (412)
T PRK12892 9 GQRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQN 87 (412)
T ss_pred HHHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCC
Confidence 4578899999999877 44558899999999999999999864 456999999653 448899999999999
Q ss_pred CCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc-----c-CcHHHHHHcCCCC---
Q 014449 107 LQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-----G-AGAFHMIKEGALG--- 177 (424)
Q Consensus 107 ~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg-----~-~G~~~l~~~~~~~--- 177 (424)
++ +| +|| |++++++|.|+++|++.+..++++|.|++++|||+ + .|++.++.+....
T Consensus 88 ~~---g~---------~dg---~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~ 152 (412)
T PRK12892 88 LG---GR---------YDG---ALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADAL 152 (412)
T ss_pred CC---Cc---------ccc---hHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHH
Confidence 75 23 444 36899999999999999988999999999999995 3 5888887431100
Q ss_pred --------------------ccce-----------eeEecccCC---CCCCceeeecCccccceeEEEEEEEeCCcccCC
Q 014449 178 --------------------DSEA-----------IFGMHIDVG---IPTGSIASISGPHLAATSVFNVKVEGRGGHAAM 223 (424)
Q Consensus 178 --------------------~~~~-----------~i~~~~~~~---~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~ 223 (424)
..|+ .+..|.+.+ ++++. .....++++|..+++|+++|+++|++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G~~aHa~~ 231 (412)
T PRK12892 153 AARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTGEAGHAGT 231 (412)
T ss_pred hCccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEEECCCCCC
Confidence 0111 111121111 01121 112345678999999999999999985
Q ss_pred -CC-CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecC-CcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHH
Q 014449 224 -PH-STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVV 300 (424)
Q Consensus 224 -~~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG-~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~ 300 (424)
|+ .+.||+..+++++.+|+++..+... ..+++++.|+|| ...|+||++|++++|+|+.|.++.+++.+.|++++
T Consensus 232 ~p~~~g~nAi~~a~~~i~~l~~~~~~~~~---~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~ 308 (412)
T PRK12892 232 TPMALRRDAGLAAAEMIAAIDEHFPRVCG---PAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALC 308 (412)
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 65 6899999999999999986533322 369999999986 79999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEecccCC
Q 014449 301 KQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNE 380 (424)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~ 380 (424)
+..+...++++++.. ...++++..++++++.+++++++ +|.++.. ...+|++|+++|.+.+|+++++ |
T Consensus 309 ~~~~~~~~~~~e~~~----~~~~~~~~~d~~lv~~~~~a~~~-~g~~~~~--~~~~g~tDa~~~~~~ip~~~~~-g---- 376 (412)
T PRK12892 309 REIARRRGCRVSVDR----IAEYAPAPCDAALVDALRAAAEA-AGGPYLE--MPSGAGHDAQNMARIAPSAMLF-V---- 376 (412)
T ss_pred HHHHHHhCCeEEEEE----EecCCCcCCCHHHHHHHHHHHHH-cCCCccc--cCcchHHHHHHHHhHCCEEEEE-e----
Confidence 998777788888776 44567777888999999999999 5877542 3678899999998888865433 3
Q ss_pred CCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHh
Q 014449 381 EKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 381 ~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~ 416 (424)
||+...+|++||+++++++.+++++|+.++.+++.
T Consensus 377 -p~~~~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 377 -PSKGGISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred -ccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 44445689999999999999999999999988864
No 45
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=4.1e-45 Score=352.47 Aligned_cols=328 Identities=16% Similarity=0.123 Sum_probs=256.8
Q ss_pred HHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccCCCCCCCCCccccccCC
Q 014449 42 SVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDG 121 (424)
Q Consensus 42 ~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~~~~~~~g 121 (424)
+++++|++|||+|++|.++++||+++|+++|++++. +..+|+++..++ ++|+|+|+||+||||. .|+.. .+||
T Consensus 1 ~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~-~~~~~~~~~~~~-~~~~i~~~~H~D~vp~----~~~~~-~~~g 73 (336)
T TIGR01902 1 ELLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLII-DDAGNFILGKGD-GHKKILLAGHVDTVPG----YIPVK-IEGG 73 (336)
T ss_pred ChHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEE-CCCCcEEEEeCC-CCceEEEEccccccCC----CcccE-EeCC
Confidence 368999999999999999999999999999999854 344688887643 3599999999999984 35443 5689
Q ss_pred ccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCCCCCcee
Q 014449 122 KMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIA 197 (424)
Q Consensus 122 ~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~ 197 (424)
++||||+ ||+++++|+|++.+++. +.+|.|++++||| ++.|+++++++.. . ++++.. + |++..
T Consensus 74 ~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~--~-~~~ii~--e---pt~~~- 140 (336)
T TIGR01902 74 LLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY--P-FYVIVG--E---PSGAE- 140 (336)
T ss_pred EEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC--C-CEEEEe--c---CCCCc-
Confidence 9999997 99999999999999754 3589999999999 6689999998753 2 344443 2 33321
Q ss_pred eecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccCCcEEE
Q 014449 198 SISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEF 277 (424)
Q Consensus 198 ~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~ 277 (424)
....+++|..+++++++|+++|++.+. ||+..+.+++.+|.+..... ......+++++.++||...|+||++|++
T Consensus 141 -~i~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~gg~~~nvIP~~a~~ 215 (336)
T TIGR01902 141 -GITLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQP-ENYDKPSIVPTIIRFGESYNDTPAKLEL 215 (336)
T ss_pred -ceeeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhccc-cCCCCCcceeEEEEccCCCcCCCceEEE
Confidence 124567899999999999999999875 48999999999987422111 1112357889999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCCCcccCCCC
Q 014449 278 GGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPKNVGEAKKV 355 (424)
Q Consensus 278 ~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 355 (424)
.+|+|+.|+++.+++.++|++ ....++++. ...+|+ +.++++++.+.+++++. +.++.. ...
T Consensus 216 ~idiR~~p~~~~~~~~~~i~~-------~~~~~~~~~------~~~~p~~~~~~~~lv~~~~~a~~~~-~~~~~~--~~~ 279 (336)
T TIGR01902 216 HFDLRYPPNNKPEEAIKEITD-------KFPICLEIV------DETPPYKVSRNNPLVRAFVRAIRKQ-GMKPRL--KKK 279 (336)
T ss_pred EEEEeeCCCCCHHHHHHHHHh-------ccCceEEEE------eccCceecCCCCHHHHHHHHHHHHc-CCCeEE--eec
Confidence 999999999999998887775 123334332 233444 45678999999999987 655432 245
Q ss_pred CCCCcHHHHHHh--cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 356 MAGEDFAFYQQL--IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 356 ~g~tD~~~~~~~--ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
+|++|++++.+. +|++.+ | ||....+|++||+++++++.+++++|+.++..++++
T Consensus 280 ~g~tD~~~~~~~~g~p~v~~--G-----pg~~~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~~ 336 (336)
T TIGR01902 280 TGTSDMNILAPIWTVPMVAY--G-----PGDSTLDHTPQEKISLAEYLIGIKTLMLAIEELWQK 336 (336)
T ss_pred cccCccceeccccCCCeEEE--C-----CCCcccCCCCcceeEHHHHHHHHHHHHHHHHHHhcC
Confidence 688999999875 777755 4 555567899999999999999999999999988763
No 46
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-44 Score=365.43 Aligned_cols=371 Identities=15% Similarity=0.146 Sum_probs=275.0
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHhHhCCCCCC-----Cc----HHHHHHHHHHHHhCCCCeeecCCCceEE-EEEcCC
Q 014449 22 DEILTNQVMISAQQDKDWLVSVRRQIHENPELLF-----EE----HNTSALIRRELDKLGIPYAYPVAKTGIV-AQIGSG 91 (424)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~ipS~s~-----~e----~~~~~~l~~~l~~~G~~~~~~~~~~~v~-a~~~~~ 91 (424)
..++.+.+.-..+++.+++++++++|++|||++. .| .+..+||.++|+++|++++.. .++++ +++++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~--~~~v~~~~~~g~ 107 (520)
T PRK06156 30 TKPQLDALLYARLKYGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV--DNRVLEIGLGGS 107 (520)
T ss_pred cccccchhHHhhhhhHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec--CCeEEEEEecCC
Confidence 4555566666667888999999999999999984 23 356799999999999998643 33344 666544
Q ss_pred CCceeEEEeecccCCCCCCCCCcc-----c----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeee
Q 014449 92 SRPVVVLRADMDALPLQELVEWEH-----K----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQP 159 (424)
Q Consensus 92 ~~~~ill~~H~DtVp~~~~~~w~~-----~----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~ 159 (424)
+.|+|+|+||+||||++. .+|.+ + .++||++||||+ ||+++++|+|+++|++.+.+++++|.|+|++
T Consensus 108 ~~~~l~l~gH~DvVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 186 (520)
T PRK06156 108 GSDKVGILTHADVVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYT 186 (520)
T ss_pred CCCeEEEEEecCccCCCC-ccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEec
Confidence 448999999999999876 36865 3 346899999996 9999999999999998888888999999999
Q ss_pred cCC-ccCcHHHHHHcCCCCccceeeEecc-------cCCC--------------------------CCCce------eee
Q 014449 160 AEE-GGAGAFHMIKEGALGDSEAIFGMHI-------DVGI--------------------------PTGSI------ASI 199 (424)
Q Consensus 160 ~EE-g~~G~~~l~~~~~~~~~~~~i~~~~-------~~~~--------------------------~~g~~------~~~ 199 (424)
||| |+.|++.+++++.. .+..+..+. +++. ....+ ...
T Consensus 187 dEE~g~~G~~~~~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 187 TEETDGDPLKYYLERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred ccccCchhHHHHHHhcCC--CCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEe
Confidence 999 67899999887542 222222110 1110 00000 000
Q ss_pred c-----------------Ccccccee---------EEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhc------
Q 014449 200 S-----------------GPHLAATS---------VFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR------ 247 (424)
Q Consensus 200 ~-----------------g~~~~g~~---------~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~------ 247 (424)
. -.+++|.. |++|+++|+++|+|.|+.|.|||..+++++.+|++....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~ 344 (520)
T PRK06156 265 GGDPAALAAALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADA 344 (520)
T ss_pred cCCHHHHHHHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHH
Confidence 0 01122434 899999999999999999999999999999999752100
Q ss_pred --------------------ccCC-CCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHH
Q 014449 248 --------------------EADP-LQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAV 306 (424)
Q Consensus 248 --------------------~~~~-~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~ 306 (424)
..++ .+..+++++.|++|. +.|++++|+|++|+++.+++.+.|++.++.....
T Consensus 345 ~~~i~~~~~~~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~ 418 (520)
T PRK06156 345 ARYINDLVGLDYLGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAK 418 (520)
T ss_pred HHHHHHhhCCCCccCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 0011 244578888888874 5899999999999999999999999999876555
Q ss_pred cCCeEEEEeeccCCCCCC-cccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEecccCCCCCCC
Q 014449 307 HSCNAFIDLKEEEHPPYP-ATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSI 385 (424)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pG~~ 385 (424)
.++++++.. ....| ....++++++.+.+++++.+|.++.. ...+|+||++++. +++.||++ . ||..
T Consensus 419 ~gv~ve~~~----~~~~p~~~~~d~~lv~~l~~a~~~~~G~~~~~--~~~~ggTDa~~~~---~~v~fGP~--~--~g~~ 485 (520)
T PRK06156 419 HQVALDIDY----YWGEPMVRDPKGPWLKTLLDVFGHFTGLDAKP--VAIAGSTNAKLFP---NAVSFGPA--M--PGVK 485 (520)
T ss_pred cCceEEEee----cCCCceeeCCCCHHHHHHHHHHHHHhCCCCce--eeecChhhhhhCC---ccEEEcCC--C--CCCC
Confidence 666666643 22222 22456789999999999988886542 3678899998774 44445433 2 3444
Q ss_pred CCCCCCCccCCCCchHHHHHHHHHHHHHHHh
Q 014449 386 HPPHSPYFFLDEDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 386 ~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~ 416 (424)
...|++|||++++++.+++++|+.++.++++
T Consensus 486 ~~aHt~dE~V~ie~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 486 YTGHTENEFKTVEQFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred CCCcCcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 5689999999999999999999999999986
No 47
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.6e-44 Score=356.46 Aligned_cols=348 Identities=18% Similarity=0.224 Sum_probs=275.1
Q ss_pred HHHHHHHHHHhHhCCCC----------CCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC--CCceeEEEeeccc
Q 014449 37 KDWLVSVRRQIHENPEL----------LFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDA 104 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~--~~~~ill~~H~Dt 104 (424)
.+++++++++|++|||. |++|.++++||.++|+++||+++.. ...|+++++++. .+|+|+|.||+||
T Consensus 9 ~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~Dt 87 (412)
T PRK12893 9 GERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDT 87 (412)
T ss_pred HHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccC
Confidence 46889999999999964 4448999999999999999999864 445999999543 2489999999999
Q ss_pred CCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc------cCcHHHHHHcCCC--
Q 014449 105 LPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMIKEGAL-- 176 (424)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg------~~G~~~l~~~~~~-- 176 (424)
||.+. .++| |++++++|+|+++|++.+..++++|.|+|++|||+ +.|+..+......
T Consensus 88 Vp~~g------------~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~ 152 (412)
T PRK12893 88 QPTGG------------RFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDD 152 (412)
T ss_pred CCCCC------------cccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHH
Confidence 99643 2333 68999999999999998888999999999999994 3577777644210
Q ss_pred -----------------------------CccceeeEecccCCC---CCCceeeecCccccceeEEEEEEEeCCcccCC-
Q 014449 177 -----------------------------GDSEAIFGMHIDVGI---PTGSIASISGPHLAATSVFNVKVEGRGGHAAM- 223 (424)
Q Consensus 177 -----------------------------~~~~~~i~~~~~~~~---~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~- 223 (424)
.+.++.+.+|.+++. +.+ .......+++|..+++|+++|+++|++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~i~~~~kG~~~~~i~v~G~~aHas~~ 231 (412)
T PRK12893 153 ALARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEG-LPIGVVTGIQGIRWLEVTVEGQAAHAGTT 231 (412)
T ss_pred HHhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCC-CcEEEEeeecccEEEEEEEEEECCCcCCC
Confidence 012233334432211 011 1122345678999999999999999985
Q ss_pred CC-CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEec-CCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHH
Q 014449 224 PH-STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRG-GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVK 301 (424)
Q Consensus 224 ~~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~g-G~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~ 301 (424)
|+ .|.|||..+++++.+|+++..+.. ...+++++.|++ |...|+||++|++++|+|++|+++.+++.+.|+++++
T Consensus 232 p~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~ 308 (412)
T PRK12893 232 PMAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACA 308 (412)
T ss_pred cchhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 74 799999999999999998754321 246899999998 4799999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEecccCCC
Q 014449 302 QQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEE 381 (424)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~ 381 (424)
..+..++++++++. ...++++..++++++.+++++++. |.++.. ...+|+||+++|.+.+|+++++ |
T Consensus 309 ~~~~~~~~~v~~~~----~~~~~~~~~d~~l~~~l~~~~~~~-g~~~~~--~~~~g~tD~~~~~~~~p~~v~~-g----- 375 (412)
T PRK12893 309 KIAAARGVQVTVET----VWDFPPVPFDPALVALVEAAAEAL-GLSHMR--MVSGAGHDAMFLARVAPAAMIF-V----- 375 (412)
T ss_pred HHHHHcCCeEEEEE----EecCCCcCCCHHHHHHHHHHHHHc-CCCccc--cCCccHHHHHHHHhhCCEEEEE-e-----
Confidence 88777788888765 445677778899999999999886 876542 4677899999998887754333 3
Q ss_pred CCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 382 KGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 382 pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
||.....|++||++++++|.+++++|+.++.+++..
T Consensus 376 p~~~~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~~ 411 (412)
T PRK12893 376 PCRGGISHNEAEDTEPADLAAGANVLLHAVLELAGR 411 (412)
T ss_pred ecCCCCCCCccccCCHHHHHHHHHHHHHHHHHhhcc
Confidence 333456899999999999999999999999998764
No 48
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-44 Score=357.87 Aligned_cols=358 Identities=15% Similarity=0.120 Sum_probs=258.6
Q ss_pred HhhHHHHHHHHHHhHhCCCCCCCc----------HHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecc
Q 014449 34 QQDKDWLVSVRRQIHENPELLFEE----------HNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMD 103 (424)
Q Consensus 34 ~~~~~~l~~~l~~l~~ipS~s~~e----------~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~D 103 (424)
+++++++++++++|++|||+++++ .++.+|+.++|+++||+++..+...++++++++ .+|+|+|+||+|
T Consensus 7 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~-~~~~lll~gH~D 85 (444)
T PRK07205 7 EKVQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQ-GEELLAILCHLD 85 (444)
T ss_pred HHhHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecC-CCcEEEEEEeec
Confidence 345789999999999999999764 568899999999999998764444456776653 348999999999
Q ss_pred cCCCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCC
Q 014449 104 ALPLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGA 175 (424)
Q Consensus 104 tVp~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~ 175 (424)
|||+++..+|+ |. .++||++||||+ ||+++++|.|+++|++.+.+++++|.|+|++||| ++.|++.+++...
T Consensus 86 vVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~ 165 (444)
T PRK07205 86 VVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEE 165 (444)
T ss_pred cCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCC
Confidence 99998777896 43 467899999997 9999999999999999988889999999999999 6678888887421
Q ss_pred CCc----cc----eeeEec-----ccCCCCCCceeeecC-----------------------ccccc----eeEEEEEEE
Q 014449 176 LGD----SE----AIFGMH-----IDVGIPTGSIASISG-----------------------PHLAA----TSVFNVKVE 215 (424)
Q Consensus 176 ~~~----~~----~~i~~~-----~~~~~~~g~~~~~~g-----------------------~~~~g----~~~~~i~v~ 215 (424)
..+ .+ +.+... .--++|+.......| ..+.| ..+.+++++
T Consensus 166 ~~~~~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~ 245 (444)
T PRK07205 166 QATMGFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVL 245 (444)
T ss_pred CCCeeECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEE
Confidence 110 11 000000 000112111100000 11122 123489999
Q ss_pred eCCcccCCCCCCCCHHHHHHHHHHHHHHhhh-----cc--------------cC-CCCCeeEEEEEEecCCcCcccCCcE
Q 014449 216 GRGGHAAMPHSTIDPILTASSVILALQQLIS-----RE--------------AD-PLQSLVLSVTYVRGGTAFNIIPPFV 275 (424)
Q Consensus 216 G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~-----~~--------------~~-~~~~~~~~i~~i~gG~~~n~vp~~~ 275 (424)
|+++|++.|+.|.|||..+++++.++++... +. .+ ..+..++|++.+ |+||++|
T Consensus 246 G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~~------nvvP~~a 319 (444)
T PRK07205 246 GKSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAGL------TITKEKS 319 (444)
T ss_pred eEEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEEE------EEECCEE
Confidence 9999999999999999999999988864310 00 01 123467777653 8999999
Q ss_pred EEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCc--ccCCHHHHHHHHHHHHhhcCCCCcccCC
Q 014449 276 EFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPA--TVNDDSLHLLVERVGKSLLGPKNVGEAK 353 (424)
Q Consensus 276 ~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (424)
++.+|+|++|+++.+++.+.|+++++. .+++++. ...+++ .+.++++++++.+++++.+|.+.. ..
T Consensus 320 ~~~ld~R~~p~~~~e~v~~~i~~~~~~----~~v~~~~------~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~--~~ 387 (444)
T PRK07205 320 EIRIDIRIPVLADKEKLVQQLSQKAQE----YGLTYEE------FDYLAPLYVPLDSELVSTLMSVYQEKTGDDSP--AQ 387 (444)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHH----cCcEEEE------ecCCCceeeCCCcHHHHHHHHHHHHHhCCCCc--eE
Confidence 999999999999999999999998764 2444332 222334 346678999999999988787542 12
Q ss_pred CCCCCCcHHHHHHhcceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 354 KVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 354 ~~~g~tD~~~~~~~ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
..+|++|+..+ .|++. +|+.+ ||+...+|++||+++++++.+++++|+.++.+++++
T Consensus 388 ~~gg~~~~~~~---~~~i~--~G~~~--Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~~ 444 (444)
T PRK07205 388 SSGGATFARTM---PNCVA--FGALF--PGAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTTD 444 (444)
T ss_pred EeccHHHHHhC---CCcEE--ECCcc--CCCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhcC
Confidence 34444443321 35443 45544 667778999999999999999999999999998764
No 49
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=3.6e-44 Score=354.64 Aligned_cols=353 Identities=16% Similarity=0.170 Sum_probs=272.3
Q ss_pred HHHHHHHHHhHhCCCCCCC----------cHHHHHHHHHHHHhCCCC-eeecCCCceEEEEEcCC---CCceeEEEeecc
Q 014449 38 DWLVSVRRQIHENPELLFE----------EHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSG---SRPVVVLRADMD 103 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~----------e~~~~~~l~~~l~~~G~~-~~~~~~~~~v~a~~~~~---~~~~ill~~H~D 103 (424)
+++++.|++|++|||+|.+ |.++++||.++|+++|++ ++. +..+|+++++++. ++|+|+|+||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~-~~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTL-DENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEE-CCCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 4678999999999999977 789999999999999997 554 3456899999553 349999999999
Q ss_pred cCCCCCC---------------------CCCccc--------cccCCccccCC-------chHHHHHHHHHHHHHHhccC
Q 014449 104 ALPLQEL---------------------VEWEHK--------SKIDGKMHACG-------HDVHTTMLLGAAKLIHQRKD 147 (424)
Q Consensus 104 tVp~~~~---------------------~~w~~~--------~~~~g~l~GrG-------~Kg~~a~~l~a~~~l~~~~~ 147 (424)
|||..+. ..|++. ....+.+|||| +||+++++|+|+++|++.+.
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 9987541 123321 01235677766 39999999999999988766
Q ss_pred CCCceEEEEeeecCCccCcHHHHHHcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccC-CCCC
Q 014449 148 KLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHS 226 (424)
Q Consensus 148 ~~~~~l~~~~~~~EEg~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~-~~~~ 226 (424)
.++++|.|+|+++||.+.|++.++.+.. ..++.+..+. .+.+.+. ..++|..+++|+++|+++|++ .|+.
T Consensus 161 ~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~---~~~g~~~----~~~~g~~~~~i~v~Gk~~Ha~~~p~~ 231 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDG---GPLGELE----YENFNAASAKITIHGVNVHPGTAKGK 231 (408)
T ss_pred CCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecC---CCcceEE----eccCceeEEEEEEeeecCCCCCCccc
Confidence 6789999999999995578988865432 3344444432 2344432 234588899999999999987 5899
Q ss_pred CCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHH
Q 014449 227 TIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAV 306 (424)
Q Consensus 227 g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~ 306 (424)
|.||+..+++++..|+++..+........+++++.++|| |++|++++++|+.+.++.+++.+.|+++++..+..
T Consensus 232 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~ 305 (408)
T PRK05469 232 MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAK 305 (408)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988765322211112245788888876 89999999999999999999999999999998877
Q ss_pred c-CCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCC
Q 014449 307 H-SCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGS 384 (424)
Q Consensus 307 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~ 384 (424)
. ++++++++........++...++++++.+++++++. |.++.. ...+|++|+++|... +|++++|+| +
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~~--~~~~ggtD~~~~~~~giP~v~~gpG-------~ 375 (408)
T PRK05469 306 YGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPII--KPIRGGTDGSQLSFMGLPCPNIFTG-------G 375 (408)
T ss_pred cCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcEE--ecCCCcccHHHHhhCCCceEEECcC-------c
Confidence 6 567777652100111124567889999999999986 877653 367799999999876 999887644 3
Q ss_pred CCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 385 IHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 385 ~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
..+|++||+++++++.+++++|.+++..|+.+
T Consensus 376 -~~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 376 -HNFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred -ccCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 24899999999999999999999999998864
No 50
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1e-43 Score=351.78 Aligned_cols=347 Identities=19% Similarity=0.232 Sum_probs=273.7
Q ss_pred HHHHHHHHHHhHhC-C---------CCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC--CCceeEEEeeccc
Q 014449 37 KDWLVSVRRQIHEN-P---------ELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDA 104 (424)
Q Consensus 37 ~~~l~~~l~~l~~i-p---------S~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~--~~~~ill~~H~Dt 104 (424)
.+.+++++++|++| + |+|++|.++++||.++|+++||++++. ..+|+++++++. ++|+|+|.||+||
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~Dt 84 (413)
T PRK09290 6 AERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDT 84 (413)
T ss_pred HHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccC
Confidence 46788888888888 3 778889999999999999999999874 456999999653 3589999999999
Q ss_pred CCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCcc------CcHHHHHHcCC---
Q 014449 105 LPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHMIKEGA--- 175 (424)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg~------~G~~~l~~~~~--- 175 (424)
||++. .+ +.|++++++|+|+++|++.+..++++|.|++++|||.+ .|++.+++...
T Consensus 85 Vp~~g------------~~---d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~ 149 (413)
T PRK09290 85 VPNGG------------RF---DGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPED 149 (413)
T ss_pred CCCCC------------Cc---CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHH
Confidence 99753 11 22789999999999999988888999999999999942 57776653210
Q ss_pred --------------------CCccceeeEe-------------cccC---CCCCCceeeecCccccceeEEEEEEEeCCc
Q 014449 176 --------------------LGDSEAIFGM-------------HIDV---GIPTGSIASISGPHLAATSVFNVKVEGRGG 219 (424)
Q Consensus 176 --------------------~~~~~~~i~~-------------~~~~---~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~ 219 (424)
+ +.|++++. |.+. .+|++. ......+++|..+++|+++|+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~-~~~i~~~~kG~~~~~i~v~Gk~a 227 (413)
T PRK09290 150 ALALRDADGVSFAEALAAIGY-DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGL-PIGVVTGIVGQRRYRVTFTGEAN 227 (413)
T ss_pred HHhccCCCCCCHHHHHHHcCC-ChhhccccccCCCCccEEEEEEeccCHHHHHCCC-cEEEEeeeeccEEEEEEEEEECC
Confidence 1 22333321 1100 012221 11234667899999999999999
Q ss_pred ccC-CC-CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecC-CcCcccCCcEEEEEEEecCChhhHHHHHHHH
Q 014449 220 HAA-MP-HSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRL 296 (424)
Q Consensus 220 Ha~-~~-~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG-~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i 296 (424)
|++ .| +.|.|||..+++++.+|+++..+.. ...+++++.+++| ...|+||++|++++|+|+.|+++.+++.++|
T Consensus 228 Has~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i 304 (413)
T PRK09290 228 HAGTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAEL 304 (413)
T ss_pred CCCCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHH
Confidence 998 58 5899999999999999988653221 2468899999974 7999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEec
Q 014449 297 KEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIG 376 (424)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g 376 (424)
+++++..+...+++++++. ...++++..++++++.+.+++++. |.++.. ...+|++|+++|...+|+++++ |
T Consensus 305 ~~~~~~~~~~~~~~~e~~~----~~~~~~~~~d~~lv~~l~~a~~~~-g~~~~~--~~~~g~tDa~~~~~~iP~~~~~-g 376 (413)
T PRK09290 305 RAAAEAIAARRGVEVEIEL----ISRRPPVPFDPGLVAALEEAAERL-GLSYRR--LPSGAGHDAQILAAVVPTAMIF-V 376 (413)
T ss_pred HHHHHHHHHHcCCeEEEEE----EecCCCccCCHHHHHHHHHHHHHc-CCCccc--cCCccchHHHHHhccCCEEEEE-e
Confidence 9999988777788888766 445677778889999999999886 866432 3677899999997669985544 3
Q ss_pred ccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 377 IRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 377 ~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
||....+|++||+++++++.+++++|+.++.+|+++
T Consensus 377 -----p~~~~~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~~ 412 (413)
T PRK09290 377 -----PSVGGISHNPAEFTSPEDCAAGANVLLHALLELAEE 412 (413)
T ss_pred -----ccCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 333356899999999999999999999999998864
No 51
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.5e-43 Score=348.77 Aligned_cols=348 Identities=17% Similarity=0.127 Sum_probs=274.9
Q ss_pred HHHHHHHHHhHhCC-C---------CCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC--CCceeEEEeecccC
Q 014449 38 DWLVSVRRQIHENP-E---------LLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDAL 105 (424)
Q Consensus 38 ~~l~~~l~~l~~ip-S---------~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~--~~~~ill~~H~DtV 105 (424)
+++++.+..|.+|- . -+++|.++++||.++|+++|++++.. ..+|+++++++. ++|+|+|.||+|||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtV 88 (414)
T PRK12891 10 ERLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQ 88 (414)
T ss_pred HHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCC
Confidence 35677777777762 2 23458999999999999999999875 456999999654 24899999999999
Q ss_pred CCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCcc------CcHHHH---------
Q 014449 106 PLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHM--------- 170 (424)
Q Consensus 106 p~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg~------~G~~~l--------- 170 (424)
|.+.. .++|++++++|+|+++|++.+.+++++|.|++++|||++ .|+..+
T Consensus 89 p~gg~---------------~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~ 153 (414)
T PRK12891 89 PTGGR---------------YDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYL 153 (414)
T ss_pred CCCcc---------------ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHH
Confidence 97531 246899999999999999999999999999999999953 477533
Q ss_pred ---------------HHcCCCC-------ccceeeEecccCCC---CCCceeeecCccccceeEEEEEEEeCCcccC-CC
Q 014449 171 ---------------IKEGALG-------DSEAIFGMHIDVGI---PTGSIASISGPHLAATSVFNVKVEGRGGHAA-MP 224 (424)
Q Consensus 171 ---------------~~~~~~~-------~~~~~i~~~~~~~~---~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~-~~ 224 (424)
.+.|+.. +.++.+.+|.+++. +.+. .....++++|..+++|+++|+++|++ .|
T Consensus 154 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~-~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P 232 (414)
T PRK12891 154 LSRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGK-TIGVVTAGQGQRWYEVTLTGVDAHAGTTP 232 (414)
T ss_pred HhccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCC-cEEEEeeccCcEEEEEEEEeECCCCCCCC
Confidence 3333311 22345555655431 1221 11234567899999999999999998 57
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecC-CcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 014449 225 H-STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQ 302 (424)
Q Consensus 225 ~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG-~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~ 302 (424)
+ .|.|||..+++++.+|+++..+. ....+++++.|+|| ...|+||++|++.+|+|++|.++.+++.++|+++++.
T Consensus 233 ~~~g~nAI~~aa~~i~~l~~~~~~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~ 309 (414)
T PRK12891 233 MAFRRDALVGAARMIAFLDALGRRD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELAR 309 (414)
T ss_pred cccccCHHHHHHHHHHHHHHHHHhc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 6 58999999999999999875321 12469999999997 6999999999999999999999999999999999998
Q ss_pred HHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEecccCCCC
Q 014449 303 QAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEK 382 (424)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~p 382 (424)
.+...+++++++. ...++++..++++++.+++++++. |.+... ...+|++|++++...+|+++++ | |
T Consensus 310 ~~~~~~~~~~~~~----~~~~~~~~~d~~lv~~l~~a~~~~-G~~~~~--~~~~ggtDa~~~~~giPt~~~~-g-----p 376 (414)
T PRK12891 310 IADETGLRADIEQ----IFGYAPAPFAPGCIDAVRDAARAL-GLSHMD--IVSGAGHDACFAARGAPTGMIF-V-----P 376 (414)
T ss_pred HHHHhCCEEEEEE----EecCCCcCCCHHHHHHHHHHHHHc-CCCcee--cCCcchHHHHHHHhhCCEEEEE-E-----c
Confidence 8777788888876 456677778889999999998775 876543 3678899988876669985543 3 3
Q ss_pred CCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhhh
Q 014449 383 GSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNEH 418 (424)
Q Consensus 383 G~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~~ 418 (424)
|....+|++||++++++|..++++|+.++.++.++.
T Consensus 377 ~~~~~aH~~dE~v~i~~l~~~~~il~~~l~~~~~~~ 412 (414)
T PRK12891 377 CVDGLSHNEAEAITPEWFAAGADVLLRAVLQSAQEA 412 (414)
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhhhc
Confidence 444568999999999999999999999999998764
No 52
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=7e-44 Score=352.07 Aligned_cols=352 Identities=13% Similarity=0.139 Sum_probs=266.5
Q ss_pred HHHHHHHHHhHhCCCCCC----------CcHHHHHHHHHHHHhCCCC-eeecCCCceEEEEEcCCCC---ceeEEEeecc
Q 014449 38 DWLVSVRRQIHENPELLF----------EEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSGSR---PVVVLRADMD 103 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~~v~a~~~~~~~---~~ill~~H~D 103 (424)
+++++.+.++++|+|+|+ .|.++++||+++|+++|++ ++.++..+||+|++++..+ |+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 578899999999999998 5668999999999999997 7766436799999855433 9999999999
Q ss_pred cCCCCCCC-------------------------CCccc----------c-ccCCccccCCchHHHHHHHHHHHHHHhccC
Q 014449 104 ALPLQELV-------------------------EWEHK----------S-KIDGKMHACGHDVHTTMLLGAAKLIHQRKD 147 (424)
Q Consensus 104 tVp~~~~~-------------------------~w~~~----------~-~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~ 147 (424)
||+..... .|.|+ . ..++.+||.++||++|++|+|++.|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99742221 34321 1 346689999999999999999999998643
Q ss_pred CCCceEEEEeeecCCccCcHHHHHHcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCC-CC
Q 014449 148 KLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMP-HS 226 (424)
Q Consensus 148 ~~~~~l~~~~~~~EEg~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~-~~ 226 (424)
.++++|.|+|+++||.+.|++.+..++. +.++.+.+ . ++|+|.+..+ ..|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i--~-gep~g~i~~~----~~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTV--D-GGPLGELEYE----TFSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEe--C-CCCCCeEEEc----cccceEEEEEEEEEecCcccChHH
Confidence 4688999999999996578888765432 34444433 2 3466754332 347899999999999999975 57
Q ss_pred CCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHH
Q 014449 227 TIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAV 306 (424)
Q Consensus 227 g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~ 306 (424)
+.||+..+.+++..+.... .+. .++.+.+.+++|. .|.+|++|++.+++|+.+.++.+++.+.|+++++..+..
T Consensus 234 g~nAi~~a~~~~~~l~~~~----~~~-~t~~~~g~i~~g~-i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~ 307 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDD----RPE-YTEGREGFFHLLS-IDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNE 307 (410)
T ss_pred HHHHHHHHHHHHHhcCCcC----CCc-cccceeEEEEEEe-EEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988877665421 111 1111223445553 566999999999999999999999999999999998777
Q ss_pred cCC-eEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCC
Q 014449 307 HSC-NAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGS 384 (424)
Q Consensus 307 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~ 384 (424)
.+. .+++++........+..+.++++++.+.++++++ |.++.. ...+|++|+++|... +|++.+|+ |+
T Consensus 308 ~g~~~v~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~~~--~~~~ggtDa~~~~~~Gip~~~~G~-------G~ 377 (410)
T TIGR01882 308 YGQDRIKLDMNDQYYNMAEKIEKVMEIVDIAKQAMENL-GIEPKI--SPIRGGTDGSQLSYMGLPTPNIFA-------GG 377 (410)
T ss_pred cCCceEEEEEEeeecChhhccCCCHHHHHHHHHHHHHh-CCCCcc--cccceechHHHHHhCCCCCCeEcC-------Cc
Confidence 663 4555441000111123457788999999999986 876543 356899999999887 99987764 33
Q ss_pred CCCCCCCCccCCCCchHHHHHHHHHHHHHHH
Q 014449 385 IHPPHSPYFFLDEDVLPIGAALYTNLAETYL 415 (424)
Q Consensus 385 ~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~ 415 (424)
..+|++|||+++++|.+++++|.+++..+.
T Consensus 378 -~~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 378 -ENMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred -ccCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 349999999999999999999999998775
No 53
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.6e-42 Score=342.08 Aligned_cols=345 Identities=19% Similarity=0.178 Sum_probs=268.7
Q ss_pred HHHHHHHHHhHhCC---------CCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC--CCceeEEEeecccCC
Q 014449 38 DWLVSVRRQIHENP---------ELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDALP 106 (424)
Q Consensus 38 ~~l~~~l~~l~~ip---------S~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~--~~~~ill~~H~DtVp 106 (424)
+++++.+..|.+|| |.++.|.++++||.++|+++||+++.. ...|+++++++. ++|+|+|.||+||||
T Consensus 9 ~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp 87 (414)
T PRK12890 9 ERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVP 87 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCC
Confidence 45677777777666 778889999999999999999999875 456999999654 358999999999999
Q ss_pred CCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc------cCcHHHHHHc-------
Q 014449 107 LQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMIKE------- 173 (424)
Q Consensus 107 ~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg------~~G~~~l~~~------- 173 (424)
++. . .++|++++++|+++++|++.+..++++|.|++++|||+ +.|++.+.+.
T Consensus 88 ~~g------------~---~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~ 152 (414)
T PRK12890 88 NGG------------R---YDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVL 152 (414)
T ss_pred CCC------------C---cCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHH
Confidence 752 1 13478999999999999988888899999999999994 2566555432
Q ss_pred -----------------CCCCc-----------cceeeEecccCCC---CCCceeeecCccccceeEEEEEEEeCCcccC
Q 014449 174 -----------------GALGD-----------SEAIFGMHIDVGI---PTGSIASISGPHLAATSVFNVKVEGRGGHAA 222 (424)
Q Consensus 174 -----------------~~~~~-----------~~~~i~~~~~~~~---~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~ 222 (424)
|...+ .+..+..|.+.+. +.+. ......+++|..|++|+++|+++|++
T Consensus 153 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHas 231 (414)
T PRK12890 153 ATRDDDGTTLAEALRRIGGDPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANHAG 231 (414)
T ss_pred hccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCCCC
Confidence 11000 1111222221110 0111 11234567899999999999999998
Q ss_pred C-CC-CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEec-CCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHH
Q 014449 223 M-PH-STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRG-GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEV 299 (424)
Q Consensus 223 ~-~~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~g-G~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~ 299 (424)
. |+ .+.|||..+++++.+|+++..+.. ...+++++.|++ |...|+||++|++++|+|+.|+++.+++.++|+++
T Consensus 232 ~~P~~~g~nAI~~~~~~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~ 308 (414)
T PRK12890 232 TTPMDLRRDALVAAAELVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAE 308 (414)
T ss_pred cCChhhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5 85 558999999999999998754322 356889999997 58999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEecccC
Q 014449 300 VKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRN 379 (424)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~ 379 (424)
++..+...+++++++. ...++++..++++++.+.+++++. |.++.. ...+|+||+++|....|.++++ |
T Consensus 309 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~-g~~~~~--~~~~g~tDa~~~~~~gp~~~~~-g--- 377 (414)
T PRK12890 309 LEAIAAARGVRIELER----LSRSEPVPCDPALVDAVEAAAARL-GYPSRR--MPSGAGHDAAAIARIGPSAMIF-V--- 377 (414)
T ss_pred HHHHHHHhCCeEEEEE----eecCCCcCCCHHHHHHHHHHHHHc-CCCcee--cCCcccHHHHHHHhhCCEEEEE-e---
Confidence 9988777788888776 455677788899999999999886 876542 3577999999999876655433 3
Q ss_pred CCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHH
Q 014449 380 EEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYL 415 (424)
Q Consensus 380 ~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~ 415 (424)
||....+|++||++++++|.+++++|+.++.+|.
T Consensus 378 --p~~~~~aHs~dE~v~i~~l~~~~~i~~~ll~~l~ 411 (414)
T PRK12890 378 --PCRGGISHNPEEAMDPEDLAAGARVLLDAVLRLD 411 (414)
T ss_pred --cCCCCCCCCcCccCCHHHHHHHHHHHHHHHHHHh
Confidence 4444569999999999999999999999998874
No 54
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=1.2e-41 Score=335.61 Aligned_cols=341 Identities=17% Similarity=0.187 Sum_probs=265.5
Q ss_pred HHHHHHHhHhC-C---------CCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC-C-CceeEEEeecccCCC
Q 014449 40 LVSVRRQIHEN-P---------ELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-S-RPVVVLRADMDALPL 107 (424)
Q Consensus 40 l~~~l~~l~~i-p---------S~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~-~-~~~ill~~H~DtVp~ 107 (424)
+++.+..+.++ . |.|++|+++++||.++|+++|++++.. ..+|+++++++. + +|+|+|.||+||||.
T Consensus 3 ~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~ 81 (401)
T TIGR01879 3 LWETLMWLGEVGADPAGGMTRLALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVN 81 (401)
T ss_pred HHHHHHHHhcccCCCCCceEeCCCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCC
Confidence 44555555555 1 236679999999999999999999875 446999999654 2 489999999999997
Q ss_pred CCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc------cCcHHHHHHcCCC-----
Q 014449 108 QELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMIKEGAL----- 176 (424)
Q Consensus 108 ~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg------~~G~~~l~~~~~~----- 176 (424)
+ |+++|+ .+++++|+++++|++.+.+++++|.|++++|||+ +.|++.++.....
T Consensus 82 g------------g~~dg~---~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~ 146 (401)
T TIGR01879 82 G------------GNFDGQ---LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRN 146 (401)
T ss_pred C------------CccCCH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHh
Confidence 5 334443 4789999999999999999999999999999994 3688777642200
Q ss_pred ----------------------------CccceeeEecccCCCC---CCceeeecCccccceeEEEEEEEeCCcccCC-C
Q 014449 177 ----------------------------GDSEAIFGMHIDVGIP---TGSIASISGPHLAATSVFNVKVEGRGGHAAM-P 224 (424)
Q Consensus 177 ----------------------------~~~~~~i~~~~~~~~~---~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~-~ 224 (424)
.++++.+.+|.+++.. .|. ......+++|..|++|+++|+++|++. |
T Consensus 147 ~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~Hieqg~~l~~~g~-~~~v~~~~~G~~~~~i~v~G~~aHa~~~p 225 (401)
T TIGR01879 147 ICDAKGISFAEAMKACGPDLPNQPLRPRGDIKAYVELHIEQGPVLESNGQ-PIGVVNAIAGQRWYKVTLNGESNHAGTTP 225 (401)
T ss_pred CcCCCCCCHHHHHHHcCCCcccccccccccccEEEEEEEcCCcChhhCCC-eEEEEEEecCcEEEEEEEEEECCCCCCCC
Confidence 0122344444444221 111 122345678999999999999999985 5
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecC-CcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 014449 225 H-STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQ 302 (424)
Q Consensus 225 ~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG-~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~ 302 (424)
+ .+.||+..+++++.+|+++..+.. ...+.+++.|++| ...|+||++|++.+|+|+.|+++.+++.++|+++++.
T Consensus 226 ~~~g~nAi~~aa~~i~~l~~l~~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~ 302 (401)
T TIGR01879 226 MSLRRDPLVAASRIIHQVEEKAKRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKA 302 (401)
T ss_pred cccccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 3 579999999999999998754322 2357899999985 6799999999999999999999999999999999998
Q ss_pred HHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCC
Q 014449 303 QAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEE 381 (424)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~ 381 (424)
.+...+++++++. ...++++..++++++.+.++++++ |.++.. ...+|++|+++|... .|++.+ |
T Consensus 303 ~~~~~~~~~~~~~----~~~~~~~~~d~~lv~~l~~a~~~~-g~~~~~--~~~~ggtDa~~~~~~~~~~v~f--g----- 368 (401)
T TIGR01879 303 ISDERDIGIDIER----WMDEEPVPCSEELVAALTELCERL-GYNARV--MVSGAGHDAQILAPIVPIGMIF--I----- 368 (401)
T ss_pred HHHHcCceEEEEE----eecCCCcCCCHHHHHHHHHHHHHc-CCCccc--cccchHHHHHHHHhhCCEEEEE--e-----
Confidence 8777788888776 445677788999999999999986 876543 357889999999988 455544 4
Q ss_pred CCCCCCCCCCCccCCCCchHHHHHHHHHHHHHH
Q 014449 382 KGSIHPPHSPYFFLDEDVLPIGAALYTNLAETY 414 (424)
Q Consensus 382 pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~ 414 (424)
||....+|++||+++++++.+++++|+.++.++
T Consensus 369 Pg~~~~aH~~dE~v~~e~l~~~~~vl~~~i~~l 401 (401)
T TIGR01879 369 PSINGISHNPAEWSNITDCAEGAKVLYLMVYQL 401 (401)
T ss_pred cCCCCCcCCCCccCCHHHHHHHHHHHHHHHHhC
Confidence 555567899999999999999999999998753
No 55
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=1.2e-40 Score=335.22 Aligned_cols=346 Identities=18% Similarity=0.231 Sum_probs=254.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC----CCceeEEEeecccCCCCCC---
Q 014449 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG----SRPVVVLRADMDALPLQEL--- 110 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~----~~~~ill~~H~DtVp~~~~--- 110 (424)
+++++++++|++|||+|++|.++++||.+||+++|+++++.. .+|+++++++. +.|+|+|.||+||||.+..
T Consensus 4 ~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~ 82 (477)
T TIGR01893 4 SRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQDE-VGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSL 82 (477)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEeC-CCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCC
Confidence 578899999999999999999999999999999999988654 46899998532 2488999999999998753
Q ss_pred CCCc---cc-cccCCccccCCc------hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCcc
Q 014449 111 VEWE---HK-SKIDGKMHACGH------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDS 179 (424)
Q Consensus 111 ~~w~---~~-~~~~g~l~GrG~------Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~ 179 (424)
..|. |. ..+||++||||+ |++++++|.+++. .+ ..+++|.++|++||| |+.|++.+..... ..
T Consensus 83 ~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 83 HDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 2575 32 357899999994 7899888887764 33 356799999999999 5679999875432 22
Q ss_pred ceeeEecccC------CCCCCc-e--e--eecCccccceeEEEEEEEe-CCcccC-CCCCCC-CHHHHHHHHHHHHHHhh
Q 014449 180 EAIFGMHIDV------GIPTGS-I--A--SISGPHLAATSVFNVKVEG-RGGHAA-MPHSTI-DPILTASSVILALQQLI 245 (424)
Q Consensus 180 ~~~i~~~~~~------~~~~g~-~--~--~~~g~~~~g~~~~~i~v~G-~~~Ha~-~~~~g~-nai~~~~~~i~~l~~~~ 245 (424)
+.++..+... +.+.+. . . ......++|..+++|+++| +++|+| .|+.++ ||+..++++|.++.+..
T Consensus 157 ~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~ 236 (477)
T TIGR01893 157 KILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL 236 (477)
T ss_pred cEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC
Confidence 3333322100 011111 0 0 0001114688999999999 999998 588885 99999999999998742
Q ss_pred hcccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHH--------------------
Q 014449 246 SREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAA-------------------- 305 (424)
Q Consensus 246 ~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~-------------------- 305 (424)
..+++.+.||...|+||++|++.+|+|.......+.+.+.+.+.++....
T Consensus 237 ----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (477)
T TIGR01893 237 ----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVF 306 (477)
T ss_pred ----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCccccc
Confidence 35788889999999999999999999877666666666665555443331
Q ss_pred ------------------------------------------------------------------------HcCCeEEE
Q 014449 306 ------------------------------------------------------------------------VHSCNAFI 313 (424)
Q Consensus 306 ------------------------------------------------------------------------~~~~~~~~ 313 (424)
..+++ +
T Consensus 307 d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~--v 384 (477)
T TIGR01893 307 SENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGAR--V 384 (477)
T ss_pred CHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeE--E
Confidence 11223 3
Q ss_pred EeeccCCCCCCcc--cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceE-EEEecccCCCCCCCCCCCC
Q 014449 314 DLKEEEHPPYPAT--VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGV-MLSIGIRNEEKGSIHPPHS 390 (424)
Q Consensus 314 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~g~~~~~pG~~~~~H~ 390 (424)
+. ...++++ +.++++++.+.+++++.+|.++.. ...+|++|++.|.+.+|.+ .+.+| |++ ..+|+
T Consensus 385 ~~----~~~~~p~~~~~d~plv~~l~~a~~~~~g~~~~~--~~~~Ggtd~~~~~~~~~~i~~v~~G-----p~~-~~~H~ 452 (477)
T TIGR01893 385 EV----SAGYPSWQPDPQSNLLDTARKVYSEMFGEDPEV--KVIHAGLECGIISSKIPDIDMISIG-----PNI-YDPHS 452 (477)
T ss_pred EE----ecCCCcccCCCCCHHHHHHHHHHHHHHCCCCeE--EEeecCccHHHHHhhCCCceEEEeC-----CCC-CCCCC
Confidence 22 2334444 456789999999999998987653 3678899999988864432 34446 433 45999
Q ss_pred CCccCCCCchHHHHHHHHHHHHHH
Q 014449 391 PYFFLDEDVLPIGAALYTNLAETY 414 (424)
Q Consensus 391 ~~E~i~~~~l~~~~~~~a~~l~~~ 414 (424)
+||++++++|.+++++|++++..+
T Consensus 453 ~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 453 PNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred CCceeeHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998543
No 56
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=4.8e-40 Score=323.47 Aligned_cols=346 Identities=15% Similarity=0.144 Sum_probs=272.4
Q ss_pred HHHHHHHHHhHhC-CCC---------CCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC--CCceeEEEeecccC
Q 014449 38 DWLVSVRRQIHEN-PEL---------LFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDAL 105 (424)
Q Consensus 38 ~~l~~~l~~l~~i-pS~---------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~--~~~~ill~~H~DtV 105 (424)
.++++.+.+|.+| ..+ |..+.++.+|+.+||+++|++++.+. .+|+++++++. +.|+|++.+|+|||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D~-~gN~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFDD-VGNLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEecCCCCCCCeEEEeccccCC
Confidence 4667777777776 222 22368999999999999999988754 46999999654 24899999999999
Q ss_pred CCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc------cCcHHHHHH-------
Q 014449 106 PLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMIK------- 172 (424)
Q Consensus 106 p~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg------~~G~~~l~~------- 172 (424)
|.+. ..||. .|+++.|++++.|++++.+++++|.+++.++||| ..|++.+.-
T Consensus 82 ~~gG--------~~dg~-------~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNGG--------NLDGQ-------FGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCCC--------ccCch-------hhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 9874 23344 7899999999999999999999999999999995 457766651
Q ss_pred -----------------cCC--------CCccceeeEecccCCCCC---CceeeecCccccceeEEEEEEEeCCcccCCC
Q 014449 173 -----------------EGA--------LGDSEAIFGMHIDVGIPT---GSIASISGPHLAATSVFNVKVEGRGGHAAMP 224 (424)
Q Consensus 173 -----------------~~~--------~~~~~~~i~~~~~~~~~~---g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~ 224 (424)
.|+ ..++++.+.+|.+++... +. ..-..++++|..+++|+++|+++|+|.+
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~-~igiv~~~~G~~~~~v~v~GkaaHag~~ 225 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQ-SIGVVNAIVGQRRYTVNLKGEANHAGTT 225 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCC-eEEEEeecccceEEEEEEEEECCCCCCC
Confidence 010 124667888888664322 22 1122355679999999999999999975
Q ss_pred CC--CCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEec-CCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHH
Q 014449 225 HS--TIDPILTASSVILALQQLISREADPLQSLVLSVTYVRG-GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVK 301 (424)
Q Consensus 225 ~~--g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~g-G~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~ 301 (424)
.. +.||+..+++++..+.+...+ .....+++++.|++ |...|+||++|++++|+|.++.++.+.+.+.|++.++
T Consensus 226 p~~~r~dAi~aaa~~i~~l~~~~~~---~~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~ 302 (406)
T TIGR03176 226 PMSYRRDTVYAFSRICTQSIERAKE---IGDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMK 302 (406)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHh---cCCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 54 489999999999999886432 12345899999994 7899999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEecccCCC
Q 014449 302 QQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEE 381 (424)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~ 381 (424)
+.+...+++++++. ....++...++++++.+.+++++. +.++.. ...+|++|+++|.+.+|+++++ |
T Consensus 303 ~ia~~~g~~~ei~~----~~~~~p~~~d~~lv~~l~~a~~~~-~~~~~~--~~sggg~Da~~~~~~vP~~~if-g----- 369 (406)
T TIGR03176 303 AIADEMDITIDIDL----WMDEAPVPMNKEIVAIIEQLAKAE-KLNYRL--MHSGAGHDAQIFAPRVPTAMIF-V----- 369 (406)
T ss_pred HHHHHcCCeEEEEE----EecCCCCCCCHHHHHHHHHHHHHc-CCCcee--cCcccHHHHHHHHHHCCEEEEE-E-----
Confidence 98888888888765 223344566889999999999987 544332 3677899999999999987654 3
Q ss_pred CCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHh
Q 014449 382 KGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 382 pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~ 416 (424)
|+.....|++||+++++++..++++|+.++.+++.
T Consensus 370 p~~~g~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 370 PSIGGISHNPAERTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred eCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 22224589999999999999999999999998876
No 57
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=8.4e-41 Score=331.99 Aligned_cols=345 Identities=15% Similarity=0.128 Sum_probs=248.2
Q ss_pred HHHHHHHHHhHhCCCCCCC------------cHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccC
Q 014449 38 DWLVSVRRQIHENPELLFE------------EHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDAL 105 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtV 105 (424)
+++++++++|++|||++.. ++++++|+.++|+++|++++....- ...+.++ +..|+|+|+||+|||
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~-~~~~~~~-~~~~~l~l~gH~D~V 79 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENVDNY-AGYAEYG-QGEEYLGILGHLDVV 79 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEecCc-eEEEEeC-CCCCeEEEEeecCCC
Confidence 4689999999999999832 3689999999999999998753221 1223333 234799999999999
Q ss_pred CCCCCCCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCC
Q 014449 106 PLQELVEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALG 177 (424)
Q Consensus 106 p~~~~~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~ 177 (424)
|+++ .|. |. ..+||++||||+ ||+++++|.|+++|++.+.+++++|.|+|++||| |+.|++++++.....
T Consensus 80 p~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~ 157 (447)
T TIGR01887 80 PAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEAP 157 (447)
T ss_pred CCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCCC
Confidence 9876 686 33 457899999997 9999999999999999888889999999999999 667999888764321
Q ss_pred c----cc----eeeEec---------------------ccCCCCCCcee--eecCcccc-------------------ce
Q 014449 178 D----SE----AIFGMH---------------------IDVGIPTGSIA--SISGPHLA-------------------AT 207 (424)
Q Consensus 178 ~----~~----~~i~~~---------------------~~~~~~~g~~~--~~~g~~~~-------------------g~ 207 (424)
+ .| ++++.. ...+++++.+. ....+.++ |.
T Consensus 158 ~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~ 237 (447)
T TIGR01887 158 DIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGS 237 (447)
T ss_pred CEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceE
Confidence 1 11 222210 00123333320 00011222 44
Q ss_pred e-----EEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHH--Hhhhc---------------------ccC-CCCCeeEE
Q 014449 208 S-----VFNVKVEGRGGHAAMPHSTIDPILTASSVILALQ--QLISR---------------------EAD-PLQSLVLS 258 (424)
Q Consensus 208 ~-----~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~--~~~~~---------------------~~~-~~~~~~~~ 258 (424)
. +++|+++|+++|++.|+.|.|||..+++++.++. +...+ ..+ ..+.+++|
T Consensus 238 ~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~n 317 (447)
T TIGR01887 238 FEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMN 317 (447)
T ss_pred EEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEE
Confidence 5 7999999999999999999999999999999986 21100 001 12456899
Q ss_pred EEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcc--cCCHHHHHHH
Q 014449 259 VTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--VNDDSLHLLV 336 (424)
Q Consensus 259 i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 336 (424)
++.|++| +|++|++.+|+|++++++.+++.+++.+.+. +. ..+.. ....+|. +.+.++++.+
T Consensus 318 vg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~----~~~~~p~~~~~~~~lv~~l 381 (447)
T TIGR01887 318 VGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTE----NGYLKPLYVPKDDPLVQTL 381 (447)
T ss_pred EEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEE----ccCCCCeEECCCCHHHHHH
Confidence 9999988 4899999999999999999987777764322 11 22222 1122222 4567899999
Q ss_pred HHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHH
Q 014449 337 ERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLA 411 (424)
Q Consensus 337 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l 411 (424)
.+++++.+|.++.. ...+|+||+.++ |.. +.+|+.+ ||+...+|++||++++++|.+++++|+.++
T Consensus 382 ~~~~~~~~g~~~~~--~~~~ggtda~~~----~~~-i~~Gp~~--pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 382 MKVYEKQTGDEGTP--VAIGGGTYARLM----ENG-VAFGALF--PGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHHHHHhCCCCCe--eEecchhhhhhC----CCc-EEeCCCC--CCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 99999988876543 245777877654 332 3445444 777788999999999999999999998763
No 58
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=331.92 Aligned_cols=349 Identities=16% Similarity=0.176 Sum_probs=276.2
Q ss_pred HHHHHHHHHHhHhCCCCCC-------------CcHHHHHHHHHHHHhCCCC-eeecCCCceEEEEEcCC--CCceeEEEe
Q 014449 37 KDWLVSVRRQIHENPELLF-------------EEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSG--SRPVVVLRA 100 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~-------------~e~~~~~~l~~~l~~~G~~-~~~~~~~~~v~a~~~~~--~~~~ill~~ 100 (424)
.+++++.+..|.+|+.|+. .+.++.+|+.+||++.|++ ++.+.. +|+++++++. +.|+|++.+
T Consensus 180 ~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~~-gNv~~~~~g~~~~~p~v~~gS 258 (591)
T PRK13799 180 GADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDAV-GNVVGRYKAADDDAKTLITGS 258 (591)
T ss_pred HHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECCC-CCEEEEcCCCCCCCCeEEEec
Confidence 4688899999999974222 2568999999999999998 887544 6999999654 358999999
Q ss_pred ecccCCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc------cCcHHHHH---
Q 014449 101 DMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMI--- 171 (424)
Q Consensus 101 H~DtVp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg------~~G~~~l~--- 171 (424)
|+||||.+ |+++|+ +|++++|.+++.|++.+++++++|.+++.++||| +.|++.+.
T Consensus 259 HlDTV~~g------------G~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~ 323 (591)
T PRK13799 259 HYDTVRNG------------GKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGDF 323 (591)
T ss_pred cccccCCC------------CccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCCC
Confidence 99999854 556665 8899999999999999999999999999999996 25666664
Q ss_pred -----H----cCC---------------C-------CccceeeEecccCCCCC---CceeeecCccccceeEEEEEEEeC
Q 014449 172 -----K----EGA---------------L-------GDSEAIFGMHIDVGIPT---GSIASISGPHLAATSVFNVKVEGR 217 (424)
Q Consensus 172 -----~----~~~---------------~-------~~~~~~i~~~~~~~~~~---g~~~~~~g~~~~g~~~~~i~v~G~ 217 (424)
+ +|. . .++++.+.+|.+++... +. .....++++|..+++|+++|+
T Consensus 324 ~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~-~igvV~g~~G~~~~~Itv~Gk 402 (591)
T PRK13799 324 NMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDI-PLGIVTSIAGSARYICEFIGM 402 (591)
T ss_pred hHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCC-cEEEEeeeccceEEEEEEEEE
Confidence 1 121 0 14567788887775211 11 112234567999999999999
Q ss_pred CcccCC-CC-CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEec-CCcCcccCCcEEEEEEEecCChhhHHHHHH
Q 014449 218 GGHAAM-PH-STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRG-GTAFNIIPPFVEFGGTLRSLTTEGLYQLQK 294 (424)
Q Consensus 218 ~~Ha~~-~~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~g-G~~~n~vp~~~~~~~~iR~~~~~~~~~~~~ 294 (424)
++|+|. |. .+.||+..+++++..++++..+. +....+.+++.|++ +...|+||++|++.+|+|..+.++.+.+.+
T Consensus 403 aaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l~~ 480 (591)
T PRK13799 403 ASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAAVA 480 (591)
T ss_pred CCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHHHH
Confidence 999996 53 58999999999999999875432 22335788989886 348999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEE
Q 014449 295 RLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLS 374 (424)
Q Consensus 295 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~ 374 (424)
.|++.++..+...+++++++. ....++...++++++.+.+++++. |.++.. ...++++|+++|....|..+++
T Consensus 481 ~i~~~i~~ia~~~g~~~ei~~----~~~~~~~~~d~~lv~~~~~a~~~~-G~~~~~--~~sgag~Da~~~a~~~p~amif 553 (591)
T PRK13799 481 DILAEIAAIAARRGIEYKAEL----AMKAAAAPCAPELMKQLEAATDAA-GVPLFE--LASGAGHDAMKIAEIMDQAMLF 553 (591)
T ss_pred HHHHHHHHHHHHhCCeEEEEE----EecCCCcCCCHHHHHHHHHHHHHc-CCCcee--cCcchHHHHHHHHhhCCEEEEE
Confidence 999999998888888887776 445667778889999999988875 877542 3678899999999997765555
Q ss_pred ecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHh
Q 014449 375 IGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLN 416 (424)
Q Consensus 375 ~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~ 416 (424)
.+ +|+...+|+++|+++++++..++++|..++..+..
T Consensus 554 ~~-----~g~~g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 554 TR-----CGNAGISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred Ee-----cCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 33 12224589999999999999999999999988764
No 59
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=1.5e-39 Score=324.53 Aligned_cols=342 Identities=18% Similarity=0.222 Sum_probs=256.0
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcC--C--CCceeEEEeecccCCCCCC--
Q 014449 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGS--G--SRPVVVLRADMDALPLQEL-- 110 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~--~--~~~~ill~~H~DtVp~~~~-- 110 (424)
.+++++++++|++|||+|++|.++++||.++|+++|++++.+ ..+|+++++.+ + ..|+|+|.||+||||+++.
T Consensus 9 ~~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d-~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~ 87 (485)
T PRK15026 9 PQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERD-QVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDT 87 (485)
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEE-ecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCc
Confidence 467899999999999999999999999999999999998865 34588888742 2 3489999999999998653
Q ss_pred -CCCc---cc-cccCCccccCCc------hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCc
Q 014449 111 -VEWE---HK-SKIDGKMHACGH------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGD 178 (424)
Q Consensus 111 -~~w~---~~-~~~~g~l~GrG~------Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~ 178 (424)
.+|. |. .++||++||||+ |++++++|.++ ++.+. .+++|.++|++||| |+.|++.+.. .. ..
T Consensus 88 ~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~ 161 (485)
T PRK15026 88 VHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQ 161 (485)
T ss_pred cccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CC
Confidence 2575 43 357899999885 78888887765 44454 37899999999999 6789999855 33 35
Q ss_pred cceeeEecccCCCCCCce--eeecCc--------c----ccceeEEEEEEEe-CCcccC-CCCCCC-CHHHHHHHHHHHH
Q 014449 179 SEAIFGMHIDVGIPTGSI--ASISGP--------H----LAATSVFNVKVEG-RGGHAA-MPHSTI-DPILTASSVILAL 241 (424)
Q Consensus 179 ~~~~i~~~~~~~~~~g~~--~~~~g~--------~----~~g~~~~~i~v~G-~~~Ha~-~~~~g~-nai~~~~~~i~~l 241 (424)
.+++|.+++ . ..|.+ .+..|. . .+|..+++|+++| +++||| .++.|+ |||..++++|.++
T Consensus 162 ~~~~i~~e~--~-~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~ 238 (485)
T PRK15026 162 ADILINTDS--E-EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGH 238 (485)
T ss_pred cCEEEEeCC--C-CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHh
Confidence 678887643 2 22322 111110 0 1477899999999 999999 699999 9999999999985
Q ss_pred HHhhhcccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHH------------------
Q 014449 242 QQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQ------------------ 303 (424)
Q Consensus 242 ~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~------------------ 303 (424)
.. ..+++++.|+||...|+||++|++.+++|....+..+.+.+.+.+.+...
T Consensus 239 ~~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (485)
T PRK15026 239 AE----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVAND 308 (485)
T ss_pred Hh----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEcccc
Confidence 42 36889999999999999999999999999877665555555554433310
Q ss_pred --------------------------------------------------------------------------HHHcCC
Q 014449 304 --------------------------------------------------------------------------AAVHSC 309 (424)
Q Consensus 304 --------------------------------------------------------------------------~~~~~~ 309 (424)
+...|.
T Consensus 309 ~~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~ 388 (485)
T PRK15026 309 KAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGA 388 (485)
T ss_pred ccccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCc
Confidence 001111
Q ss_pred eEEEEeeccCCCCCCcccC--CHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh---cceEEEEecccCCCCCC
Q 014449 310 NAFIDLKEEEHPPYPATVN--DDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL---IPGVMLSIGIRNEEKGS 384 (424)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pG~ 384 (424)
++++ ...+|++.. ++++++.+.+++++++|.++.. ...++++|++.|.+. +|.+.+||. .
T Consensus 389 ~~~~------~~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~~~--~~ihaglEcG~~~~~~p~i~~VsfGP~--~----- 453 (485)
T PRK15026 389 KTEA------KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNI--QIIHAGLECGLFKKPYPEMDMVSIGPT--I----- 453 (485)
T ss_pred EEEE------eCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCeE--EEEEEEehHHHHHhhCCCCCEEEECCC--C-----
Confidence 1111 334666644 4679999999999999988753 367899999999976 566665433 2
Q ss_pred CCCCCCCCccCCCCchHHHHHHHHHHHHHH
Q 014449 385 IHPPHSPYFFLDEDVLPIGAALYTNLAETY 414 (424)
Q Consensus 385 ~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~ 414 (424)
...|+|||+++++++.+..+++..++.++
T Consensus 454 -~~~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 454 -TGPHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred -CCCCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 34899999999999988777777777766
No 60
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=8.1e-40 Score=324.41 Aligned_cols=355 Identities=19% Similarity=0.214 Sum_probs=248.7
Q ss_pred HHHHHHHHhHhCCCCCCC------cHHHHHHHHHHHHhCCCCeeec--CCCceEEEEEcCCCCceeEEEeecccCCCCCC
Q 014449 39 WLVSVRRQIHENPELLFE------EHNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQEL 110 (424)
Q Consensus 39 ~l~~~l~~l~~ipS~s~~------e~~~~~~l~~~l~~~G~~~~~~--~~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~ 110 (424)
++++++++|++|||++.. +.++++|+.++|+++||+++.. ...+++++.++++ +++|+|+||+||||+++.
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~~ 80 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNPE 80 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCcc
Confidence 568899999999998753 5789999999999999998652 2446899998543 378999999999998752
Q ss_pred CCCc---cc-cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCC--CCccc
Q 014449 111 VEWE---HK-SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGA--LGDSE 180 (424)
Q Consensus 111 ~~w~---~~-~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~--~~~~~ 180 (424)
.|. |. .++||++||||+ ||+++++|+|+++|++. .++++|.|+|++||| ++.+...+++... ....+
T Consensus 81 -~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 157 (438)
T PRK08554 81 -EWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPK 157 (438)
T ss_pred -ccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCC
Confidence 576 43 367899999995 99999999999999864 467899999999999 5555556654321 12457
Q ss_pred eeeEecccCCCCCCceeeecCcc-----------ccce---eEEEEEEEeCC-cccCCCCCCCC--HHHHHHHHHHHHHH
Q 014449 181 AIFGMHIDVGIPTGSIASISGPH-----------LAAT---SVFNVKVEGRG-GHAAMPHSTID--PILTASSVILALQQ 243 (424)
Q Consensus 181 ~~i~~~~~~~~~~g~~~~~~g~~-----------~~g~---~~~~i~v~G~~-~Ha~~~~~g~n--ai~~~~~~i~~l~~ 243 (424)
++|... |......+..+.|.. -.|. +++.+++.|.+ +|++.+..+.| ++..+++++.++..
T Consensus 158 ~~iv~E--pt~~~~~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~ 235 (438)
T PRK08554 158 YMINAD--GIGMKPIIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNV 235 (438)
T ss_pred EEEEeC--CCCCcchhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCc
Confidence 777653 211111112222211 0122 35555566665 99997766655 57777777766653
Q ss_pred hhhcc----c-C--CCCCeeEEEEEEecCC-----------------------------------cCccc---CCcEEEE
Q 014449 244 LISRE----A-D--PLQSLVLSVTYVRGGT-----------------------------------AFNII---PPFVEFG 278 (424)
Q Consensus 244 ~~~~~----~-~--~~~~~~~~i~~i~gG~-----------------------------------~~n~v---p~~~~~~ 278 (424)
..... . . +....++++....+|. ..|++ |+.|+++
T Consensus 236 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~ 315 (438)
T PRK08554 236 LAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLK 315 (438)
T ss_pred eEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEE
Confidence 21000 0 0 0011222222222333 44555 8999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCC
Q 014449 279 GTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAG 358 (424)
Q Consensus 279 ~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~ 358 (424)
+|+|+.+ .+.+++.++|++.++.. ..+++++++... ....+..+.++++++.+++++++. |.++.. ...+|+
T Consensus 316 ~DiR~~~-~~~e~v~~~i~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~lv~~~~~~~~~~-g~~~~~--~~~~Gg 387 (438)
T PRK08554 316 LDIRAMS-YSKEDIERTLKEVLEFN--LPEAEVEIRTNE--KAGYLFTPPDEEIVKVALRVLKEL-GEDAEP--VEGPGA 387 (438)
T ss_pred EEEEecC-CCHHHHHHHHHHHhhcc--CCCceEEEEecc--CCCCcCCCCChHHHHHHHHHHHHh-CCCcEE--EecCCc
Confidence 9999988 68899999999988643 235566665410 233334456788999999999985 987643 467899
Q ss_pred CcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHH
Q 014449 359 EDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYL 415 (424)
Q Consensus 359 tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~ 415 (424)
||++++... +|++.+|++ . ..+|++|||+++++|.+++++|..++.+|+
T Consensus 388 tDa~~~~~~Gip~v~~Gp~-------~-~~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 388 SDSRYFTPYGVKAIDFGPK-------G-GNIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred hHHHHHHhcCCCceEECCC-------C-CCCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 999999887 999886543 2 358999999999999999999999998876
No 61
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.1e-38 Score=326.34 Aligned_cols=346 Identities=14% Similarity=0.138 Sum_probs=273.0
Q ss_pred HHHHHHHHHhHhCCCCCC-------------CcHHHHHHHHHHHHhCCC-CeeecCCCceEEEEEcCC-C-CceeEEEee
Q 014449 38 DWLVSVRRQIHENPELLF-------------EEHNTSALIRRELDKLGI-PYAYPVAKTGIVAQIGSG-S-RPVVVLRAD 101 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~-------------~e~~~~~~l~~~l~~~G~-~~~~~~~~~~v~a~~~~~-~-~~~ill~~H 101 (424)
+++++.+..|.+|+.+++ .+.++++||.+||+++|+ +++.+ .-+|+++++++. + .|+|++.+|
T Consensus 181 ~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D-~~GNl~~~~~g~~~~~~~v~~gsH 259 (591)
T PRK13590 181 NDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHID-AVGNVVGRYKGSTPQAKRLLTGSH 259 (591)
T ss_pred HHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeEC-CCCCEEEEecCCCCCCCeEEEecc
Confidence 678888999999876432 257899999999999999 87765 447999999653 3 388999999
Q ss_pred cccCCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCc------cCcHHH------
Q 014449 102 MDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFH------ 169 (424)
Q Consensus 102 ~DtVp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg------~~G~~~------ 169 (424)
+||||.+ |+++| ++|++++|++++.|++.++.++++|.|++.++||| ..|++.
T Consensus 260 lDTV~~g------------G~~DG---~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~ 324 (591)
T PRK13590 260 YDTVRNG------------GKYDG---RLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFD 324 (591)
T ss_pred cccCCCC------------CCccc---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCCCh
Confidence 9999865 33333 38999999999999999999999999999999996 356764
Q ss_pred --HHH---------------cCC-----------CCccceeeEecccCCCC---CCceeeecCccccceeEEEEEEEeCC
Q 014449 170 --MIK---------------EGA-----------LGDSEAIFGMHIDVGIP---TGSIASISGPHLAATSVFNVKVEGRG 218 (424)
Q Consensus 170 --l~~---------------~~~-----------~~~~~~~i~~~~~~~~~---~g~~~~~~g~~~~g~~~~~i~v~G~~ 218 (424)
+++ .|+ ..++.+.+.+|.+++.. .+. .....++++|..+++|+++|++
T Consensus 325 ~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~-~~gvV~~~~G~~~~~v~v~Gka 403 (591)
T PRK13590 325 PAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDL-PLGIVTSINGSVRYVGEMIGMA 403 (591)
T ss_pred HHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCC-ceEEEeeeeccEEEEEEEEeEC
Confidence 222 111 01455778888877521 111 1112345679999999999999
Q ss_pred cccCC-CCC-CCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEec-CCcCcccCCcEEEEEEEecCChhhHHHHHHH
Q 014449 219 GHAAM-PHS-TIDPILTASSVILALQQLISREADPLQSLVLSVTYVRG-GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKR 295 (424)
Q Consensus 219 ~Ha~~-~~~-g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~g-G~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~ 295 (424)
+|+|. |.. +.||+..+++++..+++.... ....+.+++.|++ |...|+||++|++++|+|+.+.++.+.+.+.
T Consensus 404 aHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~~ 479 (591)
T PRK13590 404 SHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVAD 479 (591)
T ss_pred CCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHHH
Confidence 99995 544 689999999999999886422 1234679999884 6689999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHhcceEEEEe
Q 014449 296 LKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSI 375 (424)
Q Consensus 296 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~ 375 (424)
|++.++..+...+++++++. ....++...++++++.+.++++++ |.++.. ...+|++|+++|...+|+.+++
T Consensus 480 i~~~i~~ia~~~g~~vei~~----~~~~~~~~~d~~lv~~~~~aa~~~-G~~~~~--~~sggg~Da~~~a~~~p~~mif- 551 (591)
T PRK13590 480 VLAELEAICERRGLRYTLEE----TMRAAAAPSAPAWQQRWEAAVAAL-GLPLFR--MPSGAGHDAMKLHEIMPQAMLF- 551 (591)
T ss_pred HHHHHHHHHHHcCCeEEEEE----eecCCCcCCCHHHHHHHHHHHHHc-CCCccc--CCcchhHHHHHHHHHCCEEEEE-
Confidence 99999998888888888876 455667788899999999999886 877542 3678999999999997755433
Q ss_pred cccCCCCCC-CCCCCCCCccCCCCchHHHHHHHHHHHHHHHhh
Q 014449 376 GIRNEEKGS-IHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 417 (424)
Q Consensus 376 g~~~~~pG~-~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~ 417 (424)
| ||. ...+|+++|+++++++..++++|..++..++.+
T Consensus 552 g-----pg~~~g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~~ 589 (591)
T PRK13590 552 V-----RGENAGISHNPLESSTADDMQLAVQAFQHLLDQLAAE 589 (591)
T ss_pred E-----eeCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 3 232 245899999999999999999999999888643
No 62
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-39 Score=298.03 Aligned_cols=364 Identities=16% Similarity=0.202 Sum_probs=272.7
Q ss_pred HHHHHHHHHHhHhCCCCCCC--cH-HHHHHHHHHHHhCCCCeee---cCCCceEEEEEcC-CCC-ceeEEEeecccCCCC
Q 014449 37 KDWLVSVRRQIHENPELLFE--EH-NTSALIRRELDKLGIPYAY---PVAKTGIVAQIGS-GSR-PVVVLRADMDALPLQ 108 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~--e~-~~~~~l~~~l~~~G~~~~~---~~~~~~v~a~~~~-~~~-~~ill~~H~DtVp~~ 108 (424)
....+..+++..|||++-.+ -. ++++|+..+.+.+|..++. .+..+.++.++.+ .+. ++|+|++|+||||+.
T Consensus 24 ~~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f 103 (420)
T KOG2275|consen 24 ENISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVF 103 (420)
T ss_pred cchHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCC
Confidence 34667788888899987544 23 8999999999999998755 4557788888844 433 999999999999987
Q ss_pred CCCCCccc-----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC--ccCcHHHHHHcCCCCc
Q 014449 109 ELVEWEHK-----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE--GGAGAFHMIKEGALGD 178 (424)
Q Consensus 109 ~~~~w~~~-----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE--g~~G~~~l~~~~~~~~ 178 (424)
.+ .|+++ ..++|.+||||+ |+..+++|.|++.|+..|.++.++|.+.|++||| |..|++.+.+...++.
T Consensus 104 ~e-~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~ 182 (420)
T KOG2275|consen 104 RE-KWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKK 182 (420)
T ss_pred cc-cCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhcc
Confidence 65 89854 247899999997 9999999999999999999999999999999999 4589999988555565
Q ss_pred cceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCC--CCCCCCHHHHHHHHHHHHHHhhhc-c-cC----
Q 014449 179 SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAM--PHSTIDPILTASSVILALQQLISR-E-AD---- 250 (424)
Q Consensus 179 ~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~--~~~g~nai~~~~~~i~~l~~~~~~-~-~~---- 250 (424)
....+.++.....+... .+.+++++|.+|++|++.|+++|+|. ++.+..++..+...+.+.++-... . ..
T Consensus 183 l~~~filDEG~~se~d~--~~vfyaEkg~w~~~v~~~G~~GHss~~~~nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~ 260 (420)
T KOG2275|consen 183 LNLGFILDEGGATENDF--ATVFYAEKGPWWLKVTANGTPGHSSYPPPNTAIEKLEKLVESLEEFREKQVDLLASGPKLA 260 (420)
T ss_pred cceeEEecCCCCCcccc--eeEEEEeeceeEEEEEecCCCCCCCCCCCccHHHHHHHHHHHHHHhHHHHHHHhhcCCcee
Confidence 55555553221112222 45678889999999999999999997 554444444444444444321110 0 11
Q ss_pred CCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHH-HHHHHHHHHHcCCeEEEEeeccCCCCCCcc---
Q 014449 251 PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRL-KEVVKQQAAVHSCNAFIDLKEEEHPPYPAT--- 326 (424)
Q Consensus 251 ~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 326 (424)
..+.+|+|++.|+||.+.|++|...++.+|+|..+..+..++.+++ +++.+.. +--+++++.+.....+++.
T Consensus 261 ~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~~----~eg~t~~f~~~~~~~~~~~t~~ 336 (420)
T KOG2275|consen 261 LGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEEA----GEGVTLEFSQKVILDYPPVTPT 336 (420)
T ss_pred ccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhhc----CCceEEeccCcccCCCCCCCCC
Confidence 2357899999999999999999999999999999999999999999 6666543 3234444422211133332
Q ss_pred cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHH
Q 014449 327 VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAA 405 (424)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~ 405 (424)
..+.++...+..++++. |.+.. +...+|+||..++.+. +|..-+.+.... ....|..||++..+...++++
T Consensus 337 ~~s~p~w~~~~~a~~~~-~~k~~--~~i~~gstdsr~~rn~gvp~~~fsp~~nt-----~~~~H~hnE~l~~~~~l~gi~ 408 (420)
T KOG2275|consen 337 DDSNPFWTAFAGALKDE-GGKGY--PEIGPGSTDSRHIRNEGVPAIGFSPIINT-----PMLLHDHNEFLNEKVFLRGIE 408 (420)
T ss_pred CCCChHHHHHHHHHHHh-cCccc--eeecccccccchhhhcCcchhcccccccc-----cceecchhhhhCchhhhhhhh
Confidence 23346888888899888 55443 2478899999999998 998776644432 267899999999999999999
Q ss_pred HHHHHHHHHH
Q 014449 406 LYTNLAETYL 415 (424)
Q Consensus 406 ~~a~~l~~~~ 415 (424)
+|..++..+.
T Consensus 409 ~~~~~i~~~~ 418 (420)
T KOG2275|consen 409 IYYTIIVNLA 418 (420)
T ss_pred HHHHHHHhhc
Confidence 9999876653
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-37 Score=284.39 Aligned_cols=377 Identities=18% Similarity=0.183 Sum_probs=290.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHhHhCCCCCCCc------HHHHHHHHHHHHhCCCCeeec-------------CCCceEEEE
Q 014449 27 NQVMISAQQDKDWLVSVRRQIHENPELLFEE------HNTSALIRRELDKLGIPYAYP-------------VAKTGIVAQ 87 (424)
Q Consensus 27 ~~~~~~~~~~~~~l~~~l~~l~~ipS~s~~e------~~~~~~l~~~l~~~G~~~~~~-------------~~~~~v~a~ 87 (424)
.++.+.|+.+++++++.|++.++|+|+|... .++++|++++|.++|-+++.. +..+.++++
T Consensus 5 ~~~fq~id~~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~~ 84 (473)
T KOG2276|consen 5 TKVFQSIDLNKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLGV 84 (473)
T ss_pred HHHHHHhhccHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhhc
Confidence 4678889999999999999999999998763 679999999999999877662 235567888
Q ss_pred EcCC-CCceeEEEeecccCCCCCCCCCccc----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeee
Q 014449 88 IGSG-SRPVVVLRADMDALPLQELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQP 159 (424)
Q Consensus 88 ~~~~-~~~~ill~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~ 159 (424)
+++. .+.++++|||+||+|....++|.+. +++||++||||+ ||++++++.|++++++.|+.++.+|.|+|.+
T Consensus 85 ~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~Eg 164 (473)
T KOG2276|consen 85 LGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVFEG 164 (473)
T ss_pred ccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEEEe
Confidence 8765 3589999999999999988899743 577899999998 9999999999999999999999999999999
Q ss_pred cCC-ccCcHHHHHHc---CCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEe--CCcccC-CCCCCCCHHH
Q 014449 160 AEE-GGAGAFHMIKE---GALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEG--RGGHAA-MPHSTIDPIL 232 (424)
Q Consensus 160 ~EE-g~~G~~~l~~~---~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G--~~~Ha~-~~~~g~nai~ 232 (424)
.|| |+.|...++++ ..+.++|+++..+. ...|.-.-...++.+|...|.|+|.| +..||| ....-..|+.
T Consensus 165 mEEsgS~~L~~l~~~~kD~~~~~vD~vciSdn---yWlg~kkPcltyGlRG~~yf~i~v~g~~~DlHSGvfGG~~hE~m~ 241 (473)
T KOG2276|consen 165 MEESGSEGLDELIEKEKDKFFKDVDFVCISDN---YWLGTKKPCLTYGLRGVIYFQIEVEGPSKDLHSGVFGGVVHEAMN 241 (473)
T ss_pred chhccCccHHHHHHHHhhhhhccCCEEEeeCc---eeccCCCcccccccccceeEEEEEeecccccccccccchhHHHHH
Confidence 999 78888888763 35668998876532 23332211223445699999999999 678999 4545567888
Q ss_pred HHHHHHHHHHHhhhc--------cc--------------C---------------CC----------C-CeeEEEEEEec
Q 014449 233 TASSVILALQQLISR--------EA--------------D---------------PL----------Q-SLVLSVTYVRG 264 (424)
Q Consensus 233 ~~~~~i~~l~~~~~~--------~~--------------~---------------~~----------~-~~~~~i~~i~g 264 (424)
.+..++..|.+...+ .. + +. + .+++.+..|.|
T Consensus 242 dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihgIeG 321 (473)
T KOG2276|consen 242 DLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHGIEG 321 (473)
T ss_pred HHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceecccc
Confidence 888888877643211 00 0 00 0 13666766664
Q ss_pred ----CCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeeccCCCCCCcccCCHHHHHHHHH
Q 014449 265 ----GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSC--NAFIDLKEEEHPPYPATVNDDSLHLLVER 338 (424)
Q Consensus 265 ----G~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (424)
..+..+||..+.-.|.+|+.|.++.+.+.+.+.++++....+.+. +++++.. ....+...+.+++-+.++++
T Consensus 322 aFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~--~~~~~Wv~d~~~~~y~a~kr 399 (473)
T KOG2276|consen 322 AFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMG--HAGAPWVSDPDDPHYLALKR 399 (473)
T ss_pred eeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeec--CCCCceecCCCchhHHHHHH
Confidence 457889999999999999999999999999999999998776554 3444441 12222233566678899999
Q ss_pred HHHhhcCCCCcccCCCCCCCCcHHHHHHh---cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHH
Q 014449 339 VGKSLLGPKNVGEAKKVMAGEDFAFYQQL---IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYL 415 (424)
Q Consensus 339 ~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~ 415 (424)
+++.++|.+|- ..+.+|+.......+. -+.+.+.+|... +.+|+.||++++..+.++.+++++++.++.
T Consensus 400 A~~~v~gvePd--~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~d------D~aHsqNEkl~i~N~~~G~k~l~ay~~el~ 471 (473)
T KOG2276|consen 400 AIETVYGVEPD--FTREGGSIPVTLTFQDITGKSVLLLPYGASD------DGAHSQNEKLNITNYVEGTKVLAAYISELA 471 (473)
T ss_pred HHHHhhCCCCC--ccccCCccceehHHHHHhCCCeEEecccccc------cchhhhcccccHHHHhhhHHHHHHHHHHHh
Confidence 99999999874 3467777766664443 455555556444 569999999999999999999999998876
Q ss_pred h
Q 014449 416 N 416 (424)
Q Consensus 416 ~ 416 (424)
+
T Consensus 472 ~ 472 (473)
T KOG2276|consen 472 Q 472 (473)
T ss_pred c
Confidence 4
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.94 E-value=3.6e-25 Score=212.58 Aligned_cols=350 Identities=18% Similarity=0.177 Sum_probs=267.5
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCe-ee----------cCCCceEEEEEcCCCC--ceeEEEeecc
Q 014449 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPY-AY----------PVAKTGIVAQIGSGSR--PVVVLRADMD 103 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~-~~----------~~~~~~v~a~~~~~~~--~~ill~~H~D 103 (424)
.+++++.+.++++||+.|++|.+++.|+.+|++..|+.+ .. ..+-+.+.+++.+.-+ |++.|.+|+|
T Consensus 4 ~~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~D 83 (414)
T COG2195 4 MERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHD 83 (414)
T ss_pred hHHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeecccccccccccccccc
Confidence 578999999999999999999999999999999999988 22 1111235666765422 8899999999
Q ss_pred cCCCCC----CCCCc----------------------cc-----------cccCCccccCCchHHHHHHHHHHHHHHhcc
Q 014449 104 ALPLQE----LVEWE----------------------HK-----------SKIDGKMHACGHDVHTTMLLGAAKLIHQRK 146 (424)
Q Consensus 104 tVp~~~----~~~w~----------------------~~-----------~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~ 146 (424)
|+|... ..+|- |+ ...+..+-|-++|+|++.++.++..+++..
T Consensus 84 t~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~ 163 (414)
T COG2195 84 TVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKH 163 (414)
T ss_pred ccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcC
Confidence 995211 01220 11 011223455666999999999999998652
Q ss_pred -CCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCC-
Q 014449 147 -DKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAM- 223 (424)
Q Consensus 147 -~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~- 223 (424)
.-+.++|++.|+++|| |+.|+..+.-.- -.++....++ +.+.|.+.... .+...+++++.|+..|++.
T Consensus 164 ~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~--f~a~~ay~iD---Gg~~g~i~~ea----~~~~~~~~~~~g~~~h~~~a 234 (414)
T COG2195 164 PEIPHGGIRGGFSPDEEIGGRGAANKDVAR--FLADFAYTLD---GGPVGEIPREA----FNAAAVRATIVGPNVHPGSA 234 (414)
T ss_pred ccccccCeEEEecchHHhhhhhhhhccHHh--hhcceeEecC---CCccCeeeeec----cchheeeeeeeccCcCccch
Confidence 3568999999999999 558887775431 1345555543 33555554332 3667899999999999995
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 014449 224 PHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQ 303 (424)
Q Consensus 224 ~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~ 303 (424)
+....||+..+.+.+..+..... ...++.+.+..+++...|.|.+.+.+...+|.......+.....+++.++..
T Consensus 235 ~~~~i~a~~~a~e~~~~~~~~~~-----~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~ 309 (414)
T COG2195 235 KGKMINALLLAAEFILELPLEEV-----PELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEM 309 (414)
T ss_pred HHHHhhHHHhhhhhhhcCCcccc-----cccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHH
Confidence 77788999988888887764311 1245677888888999999999999999999999999999999999999998
Q ss_pred HHHcC--CeEEEEeeccCCCCCCccc--CCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh-cceEEEEeccc
Q 014449 304 AAVHS--CNAFIDLKEEEHPPYPATV--NDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL-IPGVMLSIGIR 378 (424)
Q Consensus 304 ~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~ 378 (424)
.+..+ ..++++. ...||.+. .++.++..++++++++ +.++.+ ....||+|++.++.. +|+..++.|+
T Consensus 310 ~~~~g~~~~~~~~~----~~~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p~v--~~i~gGtd~~~is~~g~p~~~i~~Gp- 381 (414)
T COG2195 310 AASLGKLAGAELEV----KDSYPGWKIKPDSPLVDLAKKAYKEL-GIKPKV--KPIHGGTDGGVLSFKGLPTPNISTGP- 381 (414)
T ss_pred HHHhhhccceEEEE----eccccCcCCCCCchHHHHHHHHHHHh-CCCceE--EEeecccchhhhhccCCCCceEeccc-
Confidence 88877 6677766 56666654 4556999999999999 666664 488999999999998 8888888883
Q ss_pred CCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHH
Q 014449 379 NEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETY 414 (424)
Q Consensus 379 ~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~ 414 (424)
....|+++|+|++++++++.+++..++..+
T Consensus 382 ------~~n~Hs~~E~v~I~s~ek~~~~l~~l~~~~ 411 (414)
T COG2195 382 ------GENPHSPDEFVSIESMEKAVQVLVELLKLA 411 (414)
T ss_pred ------ccCCCCccceeehHHHHHHHHHHHHHHHHh
Confidence 245999999999999999998888877654
No 65
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.86 E-value=1.8e-21 Score=172.11 Aligned_cols=173 Identities=29% Similarity=0.455 Sum_probs=130.3
Q ss_pred EEEeecccCCCCCCCCCccc----cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccC-cH
Q 014449 97 VLRADMDALPLQELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGA-GA 167 (424)
Q Consensus 97 ll~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~-G~ 167 (424)
+|+||+|||| + ..+|+++ ..++|++||||+ |++++++|.|++.+++.+.+++++|.|+|+++|| ++. |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 4 5689754 468999999997 9999999999999998888999999999999999 445 99
Q ss_pred HHHHHcCCC--CccceeeEecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhh
Q 014449 168 FHMIKEGAL--GDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLI 245 (424)
Q Consensus 168 ~~l~~~~~~--~~~~~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~ 245 (424)
+.+++++.. .++++++..+ ++.. +...
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~e-----~~~~----------~~~~------------------------------------ 107 (189)
T PF01546_consen 79 KHLLEEGAFFGLHPDYVIIGE-----PTGK----------GGVG------------------------------------ 107 (189)
T ss_dssp HHHHHHCEEEEEEESEEEECE-----CETT----------SEEE------------------------------------
T ss_pred hhhhhhccccccccccccccc-----cccc----------cccc------------------------------------
Confidence 999998521 1233333211 1111 1000
Q ss_pred hcccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCc
Q 014449 246 SREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPA 325 (424)
Q Consensus 246 ~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (424)
T Consensus 108 -------------------------------------------------------------------------------- 107 (189)
T PF01546_consen 108 -------------------------------------------------------------------------------- 107 (189)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHH--h--cceEEEEecccCCCCCCCCCCCCCCccCCCCchH
Q 014449 326 TVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQ--L--IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLP 401 (424)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~--ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~ 401 (424)
...++++++.+.+++++..+.+.. ....+|++|++++.. . +|.+.+|++ . ...|++||+++++++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~tD~~~~~~~~~~~~~~i~~G~~-------~-~~~H~~~E~i~~~~l~ 177 (189)
T PF01546_consen 108 SDNDPPLVQALQAAAQEVGGEPPE--PVASGGGTDAGFLAEVKGLGIPAIGFGPG-------G-SNAHTPDEYIDIEDLV 177 (189)
T ss_dssp HCTCHHHHHHHHHHHHHTTSSEEE--EEEESSSSTHHHHHCHHHTTEEEEEEESC-------E-ESTTSTT-EEEHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhhcccc--ccceeccccchhhhhhhccccceeeeCCC-------C-CCCCCCCcEecHHHHH
Confidence 235677999999999998542332 247889999999995 3 666655533 3 5699999999999999
Q ss_pred HHHHHHHHHHH
Q 014449 402 IGAALYTNLAE 412 (424)
Q Consensus 402 ~~~~~~a~~l~ 412 (424)
+++++|+.++.
T Consensus 178 ~~~~~~~~~l~ 188 (189)
T PF01546_consen 178 KGAKIYAALLE 188 (189)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 66
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.76 E-value=6.7e-17 Score=150.98 Aligned_cols=254 Identities=16% Similarity=0.117 Sum_probs=173.8
Q ss_pred HHHHHHHHHHhHhCCCCCCC--cHHHHHHHHHHHHhCCCCeee----------cC--CCceEEEEEcCC-CCceeEEEee
Q 014449 37 KDWLVSVRRQIHENPELLFE--EHNTSALIRRELDKLGIPYAY----------PV--AKTGIVAQIGSG-SRPVVVLRAD 101 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~--e~~~~~~l~~~l~~~G~~~~~----------~~--~~~~v~a~~~~~-~~~~ill~~H 101 (424)
.+++.++..+|++-||+++. |...+++|...|+++.+=-+. .+ ++.||+|-+.++ .+.+|++-||
T Consensus 7 ~e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH 86 (553)
T COG4187 7 SERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGH 86 (553)
T ss_pred HHHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeec
Confidence 57899999999999999987 788999999999988542111 22 577999999664 5599999999
Q ss_pred cccCCCCCCCCCc---cc----------------------cccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceE
Q 014449 102 MDALPLQELVEWE---HK----------------------SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTV 153 (424)
Q Consensus 102 ~DtVp~~~~~~w~---~~----------------------~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l 153 (424)
+|||...+....+ |+ ...++|++|||+ |+|+|+.|..++-+.++ ....|+|
T Consensus 87 ~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNl 165 (553)
T COG4187 87 FDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNL 165 (553)
T ss_pred cceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcE
Confidence 9999876644332 11 124789999996 99999999999998877 4899999
Q ss_pred EEEeeecCC-ccCcHHHHHHcC---C-CCccceeeEecccCCCC--CCceeeecCccccceeEEEEEEEeCCcccCCCCC
Q 014449 154 RILFQPAEE-GGAGAFHMIKEG---A-LGDSEAIFGMHIDVGIP--TGSIASISGPHLAATSVFNVKVEGRGGHAAMPHS 226 (424)
Q Consensus 154 ~~~~~~~EE-g~~G~~~l~~~~---~-~~~~~~~i~~~~~~~~~--~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~ 226 (424)
.|+.++||| -+.|++..+..- . ..+++...++..++..+ .|..+....++..|..-...-|.|.+.|+|++..
T Consensus 166 Lf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~~f~ 245 (553)
T COG4187 166 LFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGYPFE 245 (553)
T ss_pred EEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCCccc
Confidence 999999999 556666554311 0 11344333333333222 2222222223345767777889999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhh---hcccC----C-------CCCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHH
Q 014449 227 TIDPILTASSVILALQQLI---SREAD----P-------LQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQL 292 (424)
Q Consensus 227 g~nai~~~~~~i~~l~~~~---~~~~~----~-------~~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~ 292 (424)
|+||-..+++++.+|..-. .+... | .-..+++|++ |..+.+.|++=+- ..+.+++
T Consensus 246 Gvnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~L~qkDlKe~Y~VqT----------p~~a~~~fN~l~h-~~ta~~~ 314 (553)
T COG4187 246 GVNANFMASEITRRLELNADLADRVDGEITPPPSCLEQKDLKESYNVQT----------PERAWLYFNWLYH-SRTAKEL 314 (553)
T ss_pred CCCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHhhhhhhhhhhccccC----------cchhhhhheehhh-cCCHHHH
Confidence 9999999999999997422 11111 1 0122444444 8888888887433 3445555
Q ss_pred HHHHHHHHHH
Q 014449 293 QKRLKEVVKQ 302 (424)
Q Consensus 293 ~~~i~~~~~~ 302 (424)
.+.+++.+++
T Consensus 315 ~d~l~~~a~~ 324 (553)
T COG4187 315 FDRLKEEAET 324 (553)
T ss_pred HHHHHHHHHH
Confidence 5555544443
No 67
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.75 E-value=3.6e-16 Score=149.27 Aligned_cols=243 Identities=20% Similarity=0.209 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcC-CCCceeEEEeecccCCC-----CCC
Q 014449 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGS-GSRPVVVLRADMDALPL-----QEL 110 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~-~~~~~ill~~H~DtVp~-----~~~ 110 (424)
.+.+.+++++|+++||+|+.|.++++++.++|+++|++++. +..+|+++.+.+ .++|+|+|.||+|+|.. .+.
T Consensus 2 ~~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~-D~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~ 80 (343)
T TIGR03106 2 TDYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYEL-TRRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDN 80 (343)
T ss_pred hHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEE-CCCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCC
Confidence 35688999999999999999999999999999999999886 467799998855 34589999999999943 110
Q ss_pred --------CCCcc------------------------------------------c------------------------
Q 014449 111 --------VEWEH------------------------------------------K------------------------ 116 (424)
Q Consensus 111 --------~~w~~------------------------------------------~------------------------ 116 (424)
++|.. .
T Consensus 81 G~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~G 160 (343)
T TIGR03106 81 GRLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVG 160 (343)
T ss_pred CeEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCC
Confidence 11110 0
Q ss_pred ----------cccCCccccCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCccCcHHHHHHcCCCCccceeeE
Q 014449 117 ----------SKIDGKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFG 184 (424)
Q Consensus 117 ----------~~~~g~l~GrG~--Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg~~G~~~l~~~~~~~~~~~~i~ 184 (424)
...+|++|||+. |+++++++++++.|++.+.+++.+|.++|+++||.+.|+...+ ..+.++
T Consensus 161 d~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~gaa~~i------~pd~a~- 233 (343)
T TIGR03106 161 DFVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSGASHAL------PPDVAE- 233 (343)
T ss_pred CEEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCccchhcc------cHhhhc-
Confidence 003456777774 9999999999999998777789999999999999445532211 111110
Q ss_pred ecccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEec
Q 014449 185 MHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRG 264 (424)
Q Consensus 185 ~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~g 264 (424)
.+.+.+. ++ .|. . .. ++
T Consensus 234 ------------------------~i~vd~~----~~-~p~--------------~-~~--------lg----------- 250 (343)
T TIGR03106 234 ------------------------LVSVDNG----TV-APG--------------Q-NS--------SE----------- 250 (343)
T ss_pred ------------------------cEEEEec----cc-CCC--------------C-Cc--------CC-----------
Confidence 0111111 00 111 0 00 00
Q ss_pred CCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhc
Q 014449 265 GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLL 344 (424)
Q Consensus 265 G~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (424)
.|.-+.+.. . ....++.+.+.+.+++++.
T Consensus 251 ------------------------------------------~Gp~i~~~d-----~---~~~~~~~l~~~l~~~A~~~- 279 (343)
T TIGR03106 251 ------------------------------------------HGVTIAMAD-----S---SGPFDYHLTRKLIRLCQDH- 279 (343)
T ss_pred ------------------------------------------CCceEEEec-----C---CCCCCHHHHHHHHHHHHHc-
Confidence 011111111 1 1234788889999999888
Q ss_pred CCCCcccCCCCCCCCcHHHHHHh---cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHH
Q 014449 345 GPKNVGEAKKVMAGEDFAFYQQL---IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLA 411 (424)
Q Consensus 345 g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l 411 (424)
|++.+.. ....|+||++.+... +|+..++++.++ .|+ .|.+++++++.+.+++..++
T Consensus 280 ~Ip~Q~~-~~~~~gtDa~~~~~~~~Gi~t~~i~iP~Ry--------~Hs-~e~~~~~D~~~~~~Ll~~~~ 339 (343)
T TIGR03106 280 GIPHRRD-VFRYYRSDAASAVEAGHDIRTALVTFGLDA--------SHG-YERTHIDALEALANLLVAYA 339 (343)
T ss_pred CCCcEEE-ecCCCCChHHHHHHcCCCCCEEEeeccccc--------hhh-hhhccHHHHHHHHHHHHHHh
Confidence 9998764 234579999997664 999999888654 899 99999999999999888876
No 68
>PRK09961 exoaminopeptidase; Provisional
Probab=99.74 E-value=1.6e-16 Score=152.13 Aligned_cols=249 Identities=13% Similarity=0.157 Sum_probs=171.0
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccCCC-----CCC-----
Q 014449 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPL-----QEL----- 110 (424)
Q Consensus 41 ~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp~-----~~~----- 110 (424)
+++|++|+++||+|++|.++++++.++|+++|++++. +..+|+++++.++++|+|+|.||+|+|+. .+.
T Consensus 3 ~~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~-D~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~ 81 (344)
T PRK09961 3 LSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRF-DGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDV 81 (344)
T ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEE
Confidence 3679999999999999999999999999999999876 47779999886544589999999999953 111
Q ss_pred ---CCCccc----------cc-----------------------------------------------------cCCccc
Q 014449 111 ---VEWEHK----------SK-----------------------------------------------------IDGKMH 124 (424)
Q Consensus 111 ---~~w~~~----------~~-----------------------------------------------------~~g~l~ 124 (424)
++|... .. .++++.
T Consensus 82 ~~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~ 161 (344)
T PRK09961 82 LPVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVM 161 (344)
T ss_pred EeCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEE
Confidence 122200 00 011222
Q ss_pred cCC--chHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCCCCCceeeecC
Q 014449 125 ACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISG 201 (424)
Q Consensus 125 GrG--~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~g 201 (424)
|+. .+.++++++.+++.+++. +++.++.++|+..|| |..|++..... + ..|.+|..+..+
T Consensus 162 gkalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i-~pd~~I~vDv~~------------ 224 (344)
T PRK09961 162 GKAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTAC------------ 224 (344)
T ss_pred EeechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc--c-CCCEEEEEeccC------------
Confidence 322 278999999999999754 578999999999999 77888766543 1 345555442210
Q ss_pred ccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCcccCCcEEEEEEE
Q 014449 202 PHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTL 281 (424)
Q Consensus 202 ~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~vp~~~~~~~~i 281 (424)
|.-.+..... +...+..
T Consensus 225 ------------------~~d~~~~~~~----------------------------~~~~lg~----------------- 241 (344)
T PRK09961 225 ------------------WAKNFDYGAA----------------------------NHRQIGN----------------- 241 (344)
T ss_pred ------------------CCCCCCCCCC----------------------------cccccCC-----------------
Confidence 1111110000 0001111
Q ss_pred ecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcH
Q 014449 282 RSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDF 361 (424)
Q Consensus 282 R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~ 361 (424)
|.-+.+.. . ....++.+++.+++++++. +++.+.. ...+|+||+
T Consensus 242 --------------------------Gp~i~~~D-----~---~~i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~ggGTDa 285 (344)
T PRK09961 242 --------------------------GPMLVLSD-----K---SLIAPPKLTAWIETVAAEI-GIPLQAD-MFSNGGTDG 285 (344)
T ss_pred --------------------------CceEEEcc-----C---CcCCCHHHHHHHHHHHHHc-CCCcEEE-ecCCCcchH
Confidence 22222211 1 2345888999999999998 8887643 234568999
Q ss_pred HHHHH--h-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHH
Q 014449 362 AFYQQ--L-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETY 414 (424)
Q Consensus 362 ~~~~~--~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~ 414 (424)
+.+.. . +|++.+++|.. ..|+++|+++++++.++++++..++..+
T Consensus 286 ~~~~~~~~Giptv~ig~p~r--------y~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 286 GAVHLTGTGVPTVVMGPATR--------HGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred HHHHHhCCCCCEEEechhhh--------cccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 98766 4 99999887643 4999999999999999999999998543
No 69
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.73 E-value=9.1e-16 Score=144.54 Aligned_cols=255 Identities=17% Similarity=0.175 Sum_probs=177.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCC-ceeEEEeecccCCC-----CCC-
Q 014449 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSR-PVVVLRADMDALPL-----QEL- 110 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~-~~ill~~H~DtVp~-----~~~- 110 (424)
+++.++|++|+++|++|+.|.++.+|+.++|++++.+++.+ ..+|+++++++.++ +.|++.+|||++.. .+.
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~D-~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEVD-RLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEEc-CCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 46789999999999999999999999999999999998864 66799999987544 56999999999931 111
Q ss_pred -------CCCccc----------cccCCcccc------------------------------------------------
Q 014449 111 -------VEWEHK----------SKIDGKMHA------------------------------------------------ 125 (424)
Q Consensus 111 -------~~w~~~----------~~~~g~l~G------------------------------------------------ 125 (424)
++|... ...+..+.|
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 234311 011101111
Q ss_pred ----------------C--CchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEec
Q 014449 126 ----------------C--GHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMH 186 (424)
Q Consensus 126 ----------------r--G~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~ 186 (424)
+ +.+.+++++|.+++.| + +.+++.++.++|++.|| |.+|++....+ -..|.+|.++
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~---i~pd~aiavd 235 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR---IKPDIAIAVD 235 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc---cCCCEEEEEe
Confidence 1 2379999999999999 4 67899999999999999 77788766433 2455566543
Q ss_pred ccCCCCCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCC
Q 014449 187 IDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGT 266 (424)
Q Consensus 187 ~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~ 266 (424)
..+. +. .|.... . .+.+
T Consensus 236 ~~~~---~d---------------------------~~~~~~--------------~---------------~~~l---- 252 (355)
T COG1363 236 VTPA---GD---------------------------TPGVPK--------------G---------------DVKL---- 252 (355)
T ss_pred cccc---cC---------------------------CCCCcc--------------c---------------cccc----
Confidence 2110 00 000000 0 0000
Q ss_pred cCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCC
Q 014449 267 AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGP 346 (424)
Q Consensus 267 ~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 346 (424)
..|..+.+.. . ....++.+.+.+.+++++. ++
T Consensus 253 ---------------------------------------g~Gp~i~~~D-----~---~~~~~~~l~~~L~~~A~~~-~I 284 (355)
T COG1363 253 ---------------------------------------GKGPVIRVKD-----A---SGIYHPKLRKFLLELAEKN-NI 284 (355)
T ss_pred ---------------------------------------CCCCEEEEEc-----C---CCCCCHHHHHHHHHHHHHc-CC
Confidence 0122223222 1 1123778888999999888 99
Q ss_pred CCcccCCCCCCCCcHHHHHHh---cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHhhh
Q 014449 347 KNVGEAKKVMAGEDFAFYQQL---IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNEH 418 (424)
Q Consensus 347 ~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~~~~~ 418 (424)
+.+.. ...+|+||++.+... +|+.+++++.+ ..|++.|.++++++..+.+++..++.++-.+.
T Consensus 285 p~Q~~-v~~~ggTDA~a~~~~g~gvpta~Igip~r--------y~Hs~~e~~~~~D~~~~~~Ll~~~i~~~~~~~ 350 (355)
T COG1363 285 PYQVD-VSPGGGTDAGAAHLTGGGVPTALIGIPTR--------YIHSPVEVAHLDDLEATVKLLVAYLESLDRET 350 (355)
T ss_pred CeEEE-ecCCCCccHHHHHHcCCCCceEEEecccc--------cccCcceeecHHHHHHHHHHHHHHHHhcchhh
Confidence 88765 233489999998776 99999988764 49999999999999999999999888765544
No 70
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.70 E-value=2.4e-15 Score=143.57 Aligned_cols=243 Identities=16% Similarity=0.137 Sum_probs=170.3
Q ss_pred HHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCC--CCceeEEEeecccCCC-----CCC----
Q 014449 42 SVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDALPL-----QEL---- 110 (424)
Q Consensus 42 ~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~--~~~~ill~~H~DtVp~-----~~~---- 110 (424)
++|++|+++||+|+.|.++++++.++|++++.+++.+ ..+|+++.++++ .+|+|+|.+|+|+|+. .+.
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~D-~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~ 80 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVETD-GLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFR 80 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEE
Confidence 5699999999999999999999999999999987754 567999988653 3589999999999942 111
Q ss_pred ----CCCccc-------cc--cCC--------------------------------------------------------
Q 014449 111 ----VEWEHK-------SK--IDG-------------------------------------------------------- 121 (424)
Q Consensus 111 ----~~w~~~-------~~--~~g-------------------------------------------------------- 121 (424)
++|... .. .+|
T Consensus 81 ~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~ 160 (350)
T TIGR03107 81 VVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQ 160 (350)
T ss_pred EEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 123200 00 111
Q ss_pred ----------ccccCC--chHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEeccc
Q 014449 122 ----------KMHACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHID 188 (424)
Q Consensus 122 ----------~l~GrG--~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~ 188 (424)
++.|+. .+.++++++.+++.+++. +++.++.++|++.|| |.+|++..... -++|.+|..+..
T Consensus 161 ~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~---i~pD~aI~vDv~ 235 (350)
T TIGR03107 161 TETILTANGKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK---FNPDIFFAVDCS 235 (350)
T ss_pred CCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh---CCCCEEEEEecC
Confidence 122222 378999999999999854 578999999999999 77888866443 145566655321
Q ss_pred CCCCCCceeeecCccccceeEEEEEEEeCCcccC-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCc
Q 014449 189 VGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTA 267 (424)
Q Consensus 189 ~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~-~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~ 267 (424)
+ ++ .|... + . ++ .
T Consensus 236 ~-------------------------------~~d~~~~~-~---------~---~l------------------g---- 249 (350)
T TIGR03107 236 P-------------------------------AGDIYGDQ-G---------G---KL------------------G---- 249 (350)
T ss_pred C-------------------------------cCCCCCCC-c---------c---cc------------------C----
Confidence 1 11 11000 0 0 00 0
Q ss_pred CcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCC
Q 014449 268 FNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPK 347 (424)
Q Consensus 268 ~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 347 (424)
.|.-+.... . ....++.+.+.+.+++++. |++
T Consensus 250 ---------------------------------------~Gp~i~~~D-----~---~~i~~~~l~~~l~~~A~~~-~I~ 281 (350)
T TIGR03107 250 ---------------------------------------EGTLLRFFD-----P---GHIMLPRMKDFLLTTAEEA-GIK 281 (350)
T ss_pred ---------------------------------------CCceEEEec-----C---CCCCCHHHHHHHHHHHHHc-CCC
Confidence 011222111 1 2345788899999999998 998
Q ss_pred CcccCCCCCCCCcHH--HHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHH
Q 014449 348 NVGEAKKVMAGEDFA--FYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETY 414 (424)
Q Consensus 348 ~~~~~~~~~g~tD~~--~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~ 414 (424)
.+. ...+|+||++ .+... +|++.+++|.++ .||+.|.++++++..+++++..++.++
T Consensus 282 ~Q~--~~~~gGtDa~~~~~~~~Gvpt~~i~ip~Ry--------~Hs~~e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 282 YQY--YVAKGGTDAGAAHLKNSGVPSTTIGVCARY--------IHSHQTLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred cEE--ecCCCCchHHHHHHhCCCCcEEEEccCccc--------ccChhheeeHHHHHHHHHHHHHHHHhc
Confidence 875 3456799999 45545 999999888654 999999999999999999999998775
No 71
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.70 E-value=2e-16 Score=127.09 Aligned_cols=104 Identities=23% Similarity=0.308 Sum_probs=94.7
Q ss_pred cccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhccc-----CCCCCeeEEEEEEecCCcCcccCCcEEE
Q 014449 203 HLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA-----DPLQSLVLSVTYVRGGTAFNIIPPFVEF 277 (424)
Q Consensus 203 ~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~-----~~~~~~~~~i~~i~gG~~~n~vp~~~~~ 277 (424)
+++|..+++|+++|+++|+|.|+.+.||+..+++++.+|+++..+.. ...+..+++++.++||...|+||++|++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~ 81 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATL 81 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEE
T ss_pred cCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEE
Confidence 46799999999999999999999999999999999999998854432 4556789999999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHH
Q 014449 278 GGTLRSLTTEGLYQLQKRLKEVVKQQAAV 306 (424)
Q Consensus 278 ~~~iR~~~~~~~~~~~~~i~~~~~~~~~~ 306 (424)
.+++|++|.++.+++.+.|++++++.+.+
T Consensus 82 ~~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 82 TVDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 99999999999999999999999987654
No 72
>PRK09864 putative peptidase; Provisional
Probab=99.67 E-value=1.5e-14 Score=137.79 Aligned_cols=247 Identities=13% Similarity=0.104 Sum_probs=170.6
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccCCC-----CCC-----
Q 014449 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPL-----QEL----- 110 (424)
Q Consensus 41 ~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp~-----~~~----- 110 (424)
+++|++|+++||+|+.|.++.+++.++|+.++.+++.+ ..+|+++..+ .++++|+|.+|+|+|+. .+.
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~D-~~GNli~~~g-~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFD-GLGSFVARKG-NKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEeC-CCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 46799999999999999999999999999999998754 6678999873 33479999999999942 111
Q ss_pred ---CCCccc-------cc--cCCc-cc-----------------------------------------------------
Q 014449 111 ---VEWEHK-------SK--IDGK-MH----------------------------------------------------- 124 (424)
Q Consensus 111 ---~~w~~~-------~~--~~g~-l~----------------------------------------------------- 124 (424)
++|... .. ++|. +.
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 234210 00 1121 11
Q ss_pred ----------cC--CchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCCCCccceeeEecccCCC
Q 014449 125 ----------AC--GHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGI 191 (424)
Q Consensus 125 ----------Gr--G~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~~~~~~~~i~~~~~~~~ 191 (424)
|+ +.+.++++++.+++.+++ ++.++.++|++.|| |.+|++.....- ++|.+|..+..+..
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~i---~PDiaIavDvt~~~ 233 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEHI---KPDVVIVLDTAVAG 233 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhcC---CCCEEEEEecccCC
Confidence 11 237899999999999864 78999999999999 778887765431 45666655332110
Q ss_pred CCCceeeecCccccceeEEEEEEEeCCcccCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEEecCCcCccc
Q 014449 192 PTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNII 271 (424)
Q Consensus 192 ~~g~~~~~~g~~~~g~~~~~i~v~G~~~Ha~~~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~n~v 271 (424)
+ .|... . ....+.+-.
T Consensus 234 d------------------------------~p~~~--------------------------~-~~~~~~lG~------- 249 (356)
T PRK09864 234 D------------------------------VPGID--------------------------N-IKYPLKLGQ------- 249 (356)
T ss_pred C------------------------------CCCCc--------------------------c-cccccccCC-------
Confidence 0 01000 0 000011111
Q ss_pred CCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCccc
Q 014449 272 PPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGE 351 (424)
Q Consensus 272 p~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (424)
|.-+.+.. . ....++.+.+.+.+++++. |++.+..
T Consensus 250 ------------------------------------Gp~i~~~D-----~---~~i~~~~l~~~l~~~A~~~-~Ip~Q~~ 284 (356)
T PRK09864 250 ------------------------------------GPGLMLFD-----K---RYFPNQKLVAALKSCAAHN-DLPLQFS 284 (356)
T ss_pred ------------------------------------CCeEEEcc-----C---CccCCHHHHHHHHHHHHHc-CCCceEE
Confidence 11121111 1 2345788999999999998 9998764
Q ss_pred CCCCCCCCcHHHHHHh---cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHHHH
Q 014449 352 AKKVMAGEDFAFYQQL---IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETY 414 (424)
Q Consensus 352 ~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~~~~~a~~l~~~ 414 (424)
....|+||++.+... +|++.++++.++ .|||.|-+++++++.+.+++..++.++
T Consensus 285 -~~~~ggTDa~~i~~~~~Gvpt~~isiP~RY--------~Hs~~e~~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 285 -TMKTGATDGGRYNVMGGGRPVVALCLPTRY--------LHANSGMISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred -EcCCCCchHHHHHHhCCCCcEEEEeeccCc--------CCCcceEeEHHHHHHHHHHHHHHHHhc
Confidence 244479999998664 999999887654 999999999999999999999998765
No 73
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.60 E-value=3.6e-14 Score=133.57 Aligned_cols=129 Identities=14% Similarity=0.168 Sum_probs=99.2
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeec-----------C--------CCceEEEEEcCCCCceeEEEee
Q 014449 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP-----------V--------AKTGIVAQIGSGSRPVVVLRAD 101 (424)
Q Consensus 41 ~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~-----------~--------~~~~v~a~~~~~~~~~ill~~H 101 (424)
..+...+-.-++.|..|.++++||+++|+++|++++.. + .+.||++.+++..++.|++.||
T Consensus 38 ~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill~AH 117 (346)
T PRK10199 38 RHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAH 117 (346)
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEEEEE
Confidence 33344445566667779999999999999999987531 1 2357999997665589999999
Q ss_pred cccCCCCCCCCCccccccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcC
Q 014449 102 MDALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEG 174 (424)
Q Consensus 102 ~DtVp~~~~~~w~~~~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~ 174 (424)
+|||++.....|.+.. +.++++|+ |+|++++|+++++|++. +++.+|.|+++++|| |..|+++++++.
T Consensus 118 ~DTV~p~~~~~~~~~~---~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~~ 189 (346)
T PRK10199 118 LDTYAPQSDADVDANL---GGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKRM 189 (346)
T ss_pred cCcCCCCCCCccccCC---CCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHhc
Confidence 9999654333444321 22788887 79999999999999865 477899999999999 779999999863
No 74
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.68 E-value=4.9e-07 Score=84.72 Aligned_cols=70 Identities=24% Similarity=0.211 Sum_probs=55.8
Q ss_pred cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHHh---cceEEEEecccCCCCCCCCCCCCCCccCCCCchHHH
Q 014449 327 VNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQL---IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIG 403 (424)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~~ 403 (424)
..++.+.+.+.+++++. |++.+.. ....|+||++.+... +|++.++++.++ .||+.|.+++++++.+
T Consensus 220 i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~ry--------~Hs~~e~~~~~Di~~~ 289 (292)
T PF05343_consen 220 IPNPKLVDKLREIAEEN-GIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCRY--------MHSPVEVIDLDDIEAT 289 (292)
T ss_dssp ESHHHHHHHHHHHHHHT-T--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEBS--------TTSTTEEEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEeccccc--------CCCcceEEEHHHHHHH
Confidence 34677888888888887 8887754 356789999999864 899999888765 9999999999999988
Q ss_pred HHH
Q 014449 404 AAL 406 (424)
Q Consensus 404 ~~~ 406 (424)
+++
T Consensus 290 ~~L 292 (292)
T PF05343_consen 290 IDL 292 (292)
T ss_dssp HHH
T ss_pred hhC
Confidence 764
No 75
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.26 E-value=9.9e-06 Score=83.71 Aligned_cols=134 Identities=19% Similarity=0.300 Sum_probs=95.8
Q ss_pred HHHHHHHHHHhHhC-CCCCCC---cHHHHHHHHHHHHhCCCC-------eeec-----------------CCCceEEEEE
Q 014449 37 KDWLVSVRRQIHEN-PELLFE---EHNTSALIRRELDKLGIP-------YAYP-----------------VAKTGIVAQI 88 (424)
Q Consensus 37 ~~~l~~~l~~l~~i-pS~s~~---e~~~~~~l~~~l~~~G~~-------~~~~-----------------~~~~~v~a~~ 88 (424)
.++.++.+.++.++ |.+.+. |..+.+|+.+++.+..-. .+.+ .+-.|++.++
T Consensus 56 ~~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki 135 (834)
T KOG2194|consen 56 EARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKI 135 (834)
T ss_pred HHHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEec
Confidence 35667777777776 666543 567888888887765221 1110 1355789999
Q ss_pred cCCC---CceeEEEeecccCCCCCCCCCccccccCCccccCCc-hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-c
Q 014449 89 GSGS---RPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGH-DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-G 163 (424)
Q Consensus 89 ~~~~---~~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~-Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g 163 (424)
+++. .-.|++++|+|+||.++ |.|+ -.++|+||++++.+.+....+.++|.|+|-..|| +
T Consensus 136 ~~k~~~~~~~lLlnaHfDSvpt~~---------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~ 200 (834)
T KOG2194|consen 136 SPKNGNDKNALLLNAHFDSVPTGP---------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESG 200 (834)
T ss_pred CCCCCCccceeeeeccccccCCCC---------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccch
Confidence 6542 24899999999999764 2233 2578999999999998887889999999999999 6
Q ss_pred cCcHHHHHHcCCCC-ccceeeEe
Q 014449 164 GAGAFHMIKEGALG-DSEAIFGM 185 (424)
Q Consensus 164 ~~G~~~l~~~~~~~-~~~~~i~~ 185 (424)
..|+..++.++.+. .+.++|.+
T Consensus 201 L~gsH~FItQH~w~~~~ka~INL 223 (834)
T KOG2194|consen 201 LLGSHAFITQHPWSKNIKAVINL 223 (834)
T ss_pred hhhcccceecChhhhhhheEEec
Confidence 68888888755433 46666654
No 76
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.05 E-value=1.2e-05 Score=70.22 Aligned_cols=80 Identities=24% Similarity=0.366 Sum_probs=57.9
Q ss_pred eeEEEeecccCCCCCCCCCccccccCCccccCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHH
Q 014449 95 VVVLRADMDALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHM 170 (424)
Q Consensus 95 ~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l 170 (424)
.|++.+|+|+++ ... . + -++.|+ -.|++++|++++.|++.+.+++++|+|+|..+|| |..|++++
T Consensus 2 ~ivi~aH~Ds~~-~~~--------~-~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDA--------D-G-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcC--------C-C-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 589999999998 221 1 1 344444 3799999999999999777889999999999999 77999999
Q ss_pred HHcC--CCCccceeeEe
Q 014449 171 IKEG--ALGDSEAIFGM 185 (424)
Q Consensus 171 ~~~~--~~~~~~~~i~~ 185 (424)
++.. ....+.++|.+
T Consensus 71 ~~~~~~~~~~~~~~inl 87 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINL 87 (179)
T ss_dssp HHHHHCHHHHEEEEEEE
T ss_pred HHhhhcccccceeEEec
Confidence 9631 12245566655
No 77
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=96.39 E-value=0.083 Score=50.81 Aligned_cols=113 Identities=14% Similarity=0.168 Sum_probs=76.5
Q ss_pred HHHHHHHHhCCCCeeec---------CCCceEEEEEcCC--------CCceeEEEeecccCCCCCCCCCccccccCCccc
Q 014449 62 ALIRRELDKLGIPYAYP---------VAKTGIVAQIGSG--------SRPVVVLRADMDALPLQELVEWEHKSKIDGKMH 124 (424)
Q Consensus 62 ~~l~~~l~~~G~~~~~~---------~~~~~v~a~~~~~--------~~~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~ 124 (424)
+-+..-+...|+..... ..-.|+.|++.++ .-|+|++.+||||....+ +.=-
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~lsv 233 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------GLSV 233 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCC-----------CCCC
Confidence 55666677788876541 1245789998622 239999999999997654 2222
Q ss_pred cCCch-HHHHHHHHHHHHHHhcc----CCCCceEEEEeeecCC-ccCcHHHHHHcC---CCCccceeeEe
Q 014449 125 ACGHD-VHTTMLLGAAKLIHQRK----DKLKGTVRILFQPAEE-GGAGAFHMIKEG---ALGDSEAIFGM 185 (424)
Q Consensus 125 GrG~K-g~~a~~l~a~~~l~~~~----~~~~~~l~~~~~~~EE-g~~G~~~l~~~~---~~~~~~~~i~~ 185 (424)
|.+++ +|++++|..++.+.+.- -..+.++.|+.+++.- --.|.+++++-. .-+.+|+++|+
T Consensus 234 gADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCL 303 (555)
T KOG2526|consen 234 GADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICL 303 (555)
T ss_pred CCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEh
Confidence 33333 57889999998877542 2357899999998766 346888888732 11258888886
No 78
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=95.93 E-value=0.1 Score=47.40 Aligned_cols=107 Identities=19% Similarity=0.235 Sum_probs=75.5
Q ss_pred cHHHHHHHHHHHHhCCCCeeec---C-------CCceEEEEEcCCCCceeEEEeecccCCCCCCCCCccccccCCccccC
Q 014449 57 EHNTSALIRRELDKLGIPYAYP---V-------AKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHAC 126 (424)
Q Consensus 57 e~~~~~~l~~~l~~~G~~~~~~---~-------~~~~v~a~~~~~~~~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~Gr 126 (424)
-+++.+|+.+.|+.+|..++.. + .-.|+++++.......+++.+|||+=-.. +|.| +-.-
T Consensus 71 ~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~r~lVlachydsk~~p---~~~~-------vgat 140 (338)
T KOG3946|consen 71 SRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNASRYLVLACHYDSKIFP---GGMF-------VGAT 140 (338)
T ss_pred cHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcchheeeecccccccCC---Ccce-------Eeec
Confidence 4789999999999999988761 1 13478888876645789999999987322 1211 2223
Q ss_pred CchHHHHHHHHHHHHHHhc----cCCCCceEEEEeeecCC-----c----cCcHHHHHHc
Q 014449 127 GHDVHTTMLLGAAKLIHQR----KDKLKGTVRILFQPAEE-----G----GAGAFHMIKE 173 (424)
Q Consensus 127 G~Kg~~a~~l~a~~~l~~~----~~~~~~~l~~~~~~~EE-----g----~~G~~~l~~~ 173 (424)
|+-.+++++|+.++++.+. .....-.+.++|--+|| | ..|++++.++
T Consensus 141 dsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA~~ 200 (338)
T KOG3946|consen 141 DSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLAAK 200 (338)
T ss_pred cccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHHHH
Confidence 4457899999998877643 22445788999999999 1 1578877665
No 79
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=95.28 E-value=0.083 Score=52.88 Aligned_cols=44 Identities=30% Similarity=0.275 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCcHHHHHHcCC
Q 014449 130 VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGA 175 (424)
Q Consensus 130 g~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G~~~l~~~~~ 175 (424)
.|++++|.+++.|+... ++.+|+|++.+.|| |..|+.+++.+..
T Consensus 231 sGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 231 SGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred HHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 78999999999999764 89999999999999 7899999998754
No 80
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=94.64 E-value=0.96 Score=45.49 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=80.1
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeec-------CCCceEEEEEcC-CCCceeEEEeeccc----C
Q 014449 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP-------VAKTGIVAQIGS-GSRPVVVLRADMDA----L 105 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~-------~~~~~v~a~~~~-~~~~~ill~~H~Dt----V 105 (424)
.+-+.+.|+|++.|+---.-...++++++.+++.|+++++. .+.+.+++.=.+ ...|+++..-+.-. +
T Consensus 171 a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y~g~~~~i~ 250 (483)
T PRK00913 171 AEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGKKPIA 250 (483)
T ss_pred HHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEECCCCCeEE
Confidence 56678999999999977777889999999999999998872 234445555433 34466665554311 1
Q ss_pred CCCCCCCCcccc-----ccCCcccc-CCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC
Q 014449 106 PLQELVEWEHKS-----KIDGKMHA-CGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (424)
Q Consensus 106 p~~~~~~w~~~~-----~~~g~l~G-rG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE 162 (424)
-+|. +.+|+. +....|.+ +.+++|.|+.+++++++.+. +++.+|..+....|=
T Consensus 251 LVGK--GITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~l--kl~vnV~~v~~l~EN 309 (483)
T PRK00913 251 LVGK--GLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAEL--KLPVNVVGVVAACEN 309 (483)
T ss_pred EEcC--ceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 1121 233331 11122332 22369999999999999876 578899988888776
No 81
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=94.44 E-value=0.69 Score=43.54 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=72.1
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecC--------------------CCc-eEEEEEcCC---CCcee
Q 014449 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV--------------------AKT-GIVAQIGSG---SRPVV 96 (424)
Q Consensus 41 ~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~--------------------~~~-~v~a~~~~~---~~~~i 96 (424)
+.+.|+|+..|+---.-...++++++.+++.|+++++.+ ..+ -++.++.+. ..++|
T Consensus 1 vn~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i 80 (311)
T PF00883_consen 1 VNLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPI 80 (311)
T ss_dssp HHHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEE
T ss_pred ChHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccE
Confidence 467899999999777778999999999999999887611 122 233444222 23556
Q ss_pred EEEeecccCCCCCCCCCccccccCCcccc-CCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC
Q 014449 97 VLRADMDALPLQELVEWEHKSKIDGKMHA-CGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (424)
Q Consensus 97 ll~~H~DtVp~~~~~~w~~~~~~~g~l~G-rG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE 162 (424)
.|.|--=|-..|. . ..+..+.+.+ +.+++|.|+.+++++++.+. +++.+|..+....|=
T Consensus 81 ~LVGKGiTFDtGG---~--~lKp~~~M~~Mk~DM~GAAaV~ga~~aia~l--k~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 81 ALVGKGITFDTGG---L--SLKPSGGMEGMKYDMGGAAAVLGAMRAIAKL--KLPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEEEEEEEE-T---T--SSSCSTTGGGGGGGGHHHHHHHHHHHHHHHC--T-SSEEEEEEEEEEE
T ss_pred EEEcceEEEecCC---c--cCCCCcchhhcccCcchHHHHHHHHHHHHHc--CCCceEEEEEEcccc
Confidence 6655411111110 0 0122233443 33479999999999999876 577888888887765
No 82
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=94.06 E-value=0.2 Score=52.49 Aligned_cols=78 Identities=22% Similarity=0.217 Sum_probs=57.4
Q ss_pred CceEEEEEcC-C-CCceeEEEeecccCCCCCCCCCccccccCCccccCCchHHHHHHHHHHH---HHHhccCCCCceEEE
Q 014449 81 KTGIVAQIGS-G-SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAK---LIHQRKDKLKGTVRI 155 (424)
Q Consensus 81 ~~~v~a~~~~-~-~~~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~---~l~~~~~~~~~~l~~ 155 (424)
-.|+++++.| . ++.-|++.+|.|....|. .++ ..|.+.++...+ .+++.|-+|.++|+|
T Consensus 338 i~NIig~I~Gs~epD~~ViigahrDSw~~Ga--------~dp--------~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F 401 (702)
T KOG2195|consen 338 IQNIIGKIEGSEEPDRYVIIGAHRDSWTFGA--------IDP--------NSGTALLLEIARALSKLKKRGWRPRRTILF 401 (702)
T ss_pred eeeEEEEEecCcCCCeEEEEeccccccccCC--------cCC--------CccHHHHHHHHHHHHHHHHcCCCccceEEE
Confidence 3589999965 3 568899999998764331 111 244566655554 455678899999999
Q ss_pred EeeecCC-ccCcHHHHHHcC
Q 014449 156 LFQPAEE-GGAGAFHMIKEG 174 (424)
Q Consensus 156 ~~~~~EE-g~~G~~~l~~~~ 174 (424)
+...+|| |..|+.++++..
T Consensus 402 ~sWdAeEfGliGStE~~E~~ 421 (702)
T KOG2195|consen 402 ASWDAEEFGLLGSTEWAEEY 421 (702)
T ss_pred EEccchhccccccHHHHHHH
Confidence 9999999 779999998853
No 83
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=93.74 E-value=0.41 Score=43.41 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=51.0
Q ss_pred ceeEEEeecccCCCCCCCCCccccccCCccccCCc-hHHHHHHHHHHHHHHhc---cCCCCceEEEEeeecCC-ccCcHH
Q 014449 94 PVVVLRADMDALPLQELVEWEHKSKIDGKMHACGH-DVHTTMLLGAAKLIHQR---KDKLKGTVRILFQPAEE-GGAGAF 168 (424)
Q Consensus 94 ~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~-Kg~~a~~l~a~~~l~~~---~~~~~~~l~~~~~~~EE-g~~G~~ 168 (424)
|.|++.+.||+...-+ +.-.|-.. -.|++++|+++++|.+. ...++++|.|.|..+|- +-.|+.
T Consensus 1 ~iIlv~armDs~s~F~-----------~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~ 69 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------DLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSS 69 (234)
T ss_pred CEEEEEecccchhccc-----------CCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchH
Confidence 5688999999986432 33233322 47999999999999865 23578999999999999 558888
Q ss_pred HHHH
Q 014449 169 HMIK 172 (424)
Q Consensus 169 ~l~~ 172 (424)
.|+.
T Consensus 70 R~vy 73 (234)
T PF05450_consen 70 RFVY 73 (234)
T ss_pred HHHH
Confidence 8864
No 84
>PRK02256 putative aminopeptidase 1; Provisional
Probab=93.65 E-value=0.088 Score=52.59 Aligned_cols=76 Identities=11% Similarity=0.035 Sum_probs=60.3
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCC----CCCCCCcHHHHHHh-cceEEEEecccCCCCCCCCCCCCCCccCCCCchHH
Q 014449 328 NDDSLHLLVERVGKSLLGPKNVGEAK----KVMAGEDFAFYQQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPI 402 (424)
Q Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~ 402 (424)
.+..++..+.+.+++. |++.+.... ..+||||...+++. +|++.+|++... .||+.|-++.+++..
T Consensus 380 ~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l~--------MHS~rE~~~~~D~~~ 450 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALLS--------MHSPFEIASKADIYE 450 (462)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhhhc--------cccHHHHhhHHHHHH
Confidence 4777888899999888 998774212 23678997777755 999999877654 899999999999999
Q ss_pred HHHHHHHHHH
Q 014449 403 GAALYTNLAE 412 (424)
Q Consensus 403 ~~~~~a~~l~ 412 (424)
+.+++..++.
T Consensus 451 ~~~ll~~f~~ 460 (462)
T PRK02256 451 TYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 85
>PRK02813 putative aminopeptidase 2; Provisional
Probab=92.93 E-value=0.15 Score=50.65 Aligned_cols=76 Identities=11% Similarity=-0.014 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCC--CCCCCcHHHHHHh---cceEEEEecccCCCCCCCCCCCCCCccCCCCchHH
Q 014449 328 NDDSLHLLVERVGKSLLGPKNVGEAKK--VMAGEDFAFYQQL---IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPI 402 (424)
Q Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~g~tD~~~~~~~---ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~ 402 (424)
.+......+++.+++. |++.+..... .+||+|++.+... +|++.+|++... .||+.|-++.+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l~--------MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPMLA--------MHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhcc--------cccHHHHccHHHHHH
Confidence 4667888888998888 9987753222 2478888887663 999988877654 899999999999999
Q ss_pred HHHHHHHHHH
Q 014449 403 GAALYTNLAE 412 (424)
Q Consensus 403 ~~~~~a~~l~ 412 (424)
+.+++..++.
T Consensus 417 ~~~l~~~f~~ 426 (428)
T PRK02813 417 LIKALTAFFS 426 (428)
T ss_pred HHHHHHHHhc
Confidence 9999887653
No 86
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=92.93 E-value=0.21 Score=50.22 Aligned_cols=80 Identities=13% Similarity=-0.032 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCC--CCCCCCcHHHHHHh---cceEEEEecccCCCCCCCCCCCCCCccCCCCchHH
Q 014449 328 NDDSLHLLVERVGKSLLGPKNVGEAK--KVMAGEDFAFYQQL---IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPI 402 (424)
Q Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~ 402 (424)
.++..+..+++.+++. |++.+.... ..+||+|++.+... +|++.+|++... .||+.|-++..++..
T Consensus 373 td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l~--------MHS~rE~~~~~D~~~ 443 (465)
T PTZ00371 373 TNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQLA--------MHSIREMCGVVDIYY 443 (465)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhcc--------cccHHHHccHHHHHH
Confidence 5678899999999997 998775322 34457888887663 999999877654 899999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 014449 403 GAALYTNLAETYLN 416 (424)
Q Consensus 403 ~~~~~a~~l~~~~~ 416 (424)
+.+++..++..|..
T Consensus 444 ~~~l~~af~~~~~~ 457 (465)
T PTZ00371 444 LVKLIKAFFTNYSK 457 (465)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999998876543
No 87
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=92.81 E-value=2.9 Score=42.08 Aligned_cols=124 Identities=15% Similarity=0.066 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeec-------CCCceEEEEEcC-CCCceeEEEeecccCCCC
Q 014449 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP-------VAKTGIVAQIGS-GSRPVVVLRADMDALPLQ 108 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~-------~~~~~v~a~~~~-~~~~~ill~~H~DtVp~~ 108 (424)
..+-+.+.|+|++-|+---.-...++++.+.+++.|+++++. .+.+.+++.=.+ ...|.++..-+...-+..
T Consensus 153 ~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~~~ 232 (468)
T cd00433 153 IAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGASK 232 (468)
T ss_pred HHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCCCC
Confidence 346678899999999977777889999999999999998872 234445555433 344666655554322100
Q ss_pred CC-----CCCcccc-----ccCCcccc-CCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC
Q 014449 109 EL-----VEWEHKS-----KIDGKMHA-CGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (424)
Q Consensus 109 ~~-----~~w~~~~-----~~~g~l~G-rG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE 162 (424)
.. .+.+|++ +...-|.+ ..+++|.|+.+++++++.+. +++.+|..+....|=
T Consensus 233 ~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l--~~~vnV~~i~~~~EN 295 (468)
T cd00433 233 KPIALVGKGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAEL--KLPVNVVGVLPLAEN 295 (468)
T ss_pred CcEEEEcCceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHc--CCCceEEEEEEeeec
Confidence 00 0112220 11111221 11269999999999999877 478888888887766
No 88
>PRK05015 aminopeptidase B; Provisional
Probab=92.25 E-value=5.1 Score=39.33 Aligned_cols=118 Identities=16% Similarity=0.125 Sum_probs=71.4
Q ss_pred HHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhC---CCCeee-------cCCCceEEEEEcCC-CCceeEEEeecccCCC
Q 014449 39 WLVSVRRQIHENPELLFEEHNTSALIRRELDKL---GIPYAY-------PVAKTGIVAQIGSG-SRPVVVLRADMDALPL 107 (424)
Q Consensus 39 ~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~---G~~~~~-------~~~~~~v~a~~~~~-~~~~ill~~H~DtVp~ 107 (424)
+.+.+.|+|++-|+---.-..+++...+++++. ++++++ ..+.+.+++.=.+. ..|.++.. +| -|.
T Consensus 101 ~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~lv~L-~Y--~~~ 177 (424)
T PRK05015 101 KIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVLLAL-DY--NPT 177 (424)
T ss_pred HHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEEEEE-Ee--cCC
Confidence 347899999999997666677777777777776 577766 12334455554333 33555533 22 233
Q ss_pred CCCCCCcc--cccc-------CCc-------ccc-CCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC
Q 014449 108 QELVEWEH--KSKI-------DGK-------MHA-CGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (424)
Q Consensus 108 ~~~~~w~~--~~~~-------~g~-------l~G-rG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE 162 (424)
++. +.+. .-+. +|. |.+ ..+.+|.|+.++++.++.+. +++.+|..++...|=
T Consensus 178 g~~-~~~v~~aLVGKGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~--~l~~nV~~il~~aEN 246 (424)
T PRK05015 178 GDP-DAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITR--GLNKRVKLFLCCAEN 246 (424)
T ss_pred CCC-CCCeeEEEecCceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhc--CCCceEEEEEEeccc
Confidence 321 2221 1111 111 111 11258999999999888766 578899998888876
No 89
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=90.83 E-value=2.6 Score=42.13 Aligned_cols=123 Identities=13% Similarity=0.053 Sum_probs=79.1
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecC-------CCceEEEEEcC-CCCceeEEEeecccCCCCC
Q 014449 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AKTGIVAQIGS-GSRPVVVLRADMDALPLQE 109 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~~v~a~~~~-~~~~~ill~~H~DtVp~~~ 109 (424)
.+-..+.|+|..-|.--.+-...+++..++|...|+.++..+ .-+.+++.=.+ ...|.++.+.|.++-+...
T Consensus 189 ~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~~ 268 (513)
T KOG2597|consen 189 AAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGADK 268 (513)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCcc
Confidence 455667777777777555567899999999999998876621 22233333333 2447777787776653221
Q ss_pred C-----CCCccc-----cccCCcccc-CCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC
Q 014449 110 L-----VEWEHK-----SKIDGKMHA-CGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (424)
Q Consensus 110 ~-----~~w~~~-----~~~~g~l~G-rG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE 162 (424)
. .+.+|+ .+....|.+ |++++|.|+++.+++++.+.+ ++-++.+++.-.|-
T Consensus 269 ~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcEN 330 (513)
T KOG2597|consen 269 TILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCEN 330 (513)
T ss_pred eEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeecc
Confidence 0 011232 122233444 555799999999999998765 56888888887776
No 90
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=90.63 E-value=4.6 Score=40.99 Aligned_cols=119 Identities=17% Similarity=0.072 Sum_probs=75.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCee-e-------cCCCceEEEEEcCC-CCceeEEEeecccCCCC
Q 014449 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-Y-------PVAKTGIVAQIGSG-SRPVVVLRADMDALPLQ 108 (424)
Q Consensus 38 ~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~-~-------~~~~~~v~a~~~~~-~~~~ill~~H~DtVp~~ 108 (424)
.+-+.+.|+|++-|+--..-...+++..+.+++.|++++ + ..+.+.+++.=.+. ..|.++...|. +..
T Consensus 212 a~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y~---g~~ 288 (569)
T PTZ00412 212 GHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEYI---GNP 288 (569)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEeC---CCC
Confidence 456778999999998666667888999888888999986 4 12344466655333 33555555442 211
Q ss_pred CCCCCc---------ccc-----ccCCcccc-CCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC
Q 014449 109 ELVEWE---------HKS-----KIDGKMHA-CGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (424)
Q Consensus 109 ~~~~w~---------~~~-----~~~g~l~G-rG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE 162 (424)
+ ...+ |+. +..+.|.+ .++.+|.|+.|++++++.+. +++.+|..+....|=
T Consensus 289 ~-~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~L--klpvnVv~iiplaEN 354 (569)
T PTZ00412 289 R-SSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKL--QLPVNVVAAVGLAEN 354 (569)
T ss_pred C-CCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHc--CCCeEEEEEEEhhhc
Confidence 1 1222 220 11111222 12259999999999999876 578889888887766
No 91
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=83.12 E-value=2.4 Score=43.03 Aligned_cols=45 Identities=16% Similarity=0.114 Sum_probs=40.3
Q ss_pred CCeeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 014449 253 QSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQ 303 (424)
Q Consensus 253 ~~~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~ 303 (424)
...|+|++.++++ |+.+.+++++|++++++.+++.+.|+++++..
T Consensus 336 ~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~ 380 (477)
T TIGR01893 336 VESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAKLA 380 (477)
T ss_pred EEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhhc
Confidence 3568899999876 88999999999999999999999999998863
No 92
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=82.92 E-value=19 Score=36.34 Aligned_cols=118 Identities=16% Similarity=0.156 Sum_probs=72.5
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCC-CCeeec-------CCCceEEEEEcCC-CCceeEEEeecccCCC
Q 014449 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLG-IPYAYP-------VAKTGIVAQIGSG-SRPVVVLRADMDALPL 107 (424)
Q Consensus 37 ~~~l~~~l~~l~~ipS~s~~e~~~~~~l~~~l~~~G-~~~~~~-------~~~~~v~a~~~~~-~~~~ill~~H~DtVp~ 107 (424)
.-+-+.+.|+|++.|+---.-..+++. ++.|++.+ +++++. .+.+.+++.=.+. ..|+++.. +=-+.
T Consensus 166 i~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl---~y~g~ 241 (485)
T COG0260 166 IAEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVL---EYNGK 241 (485)
T ss_pred HHHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEE---EcCCC
Confidence 346688999999999977666778888 77788775 887762 2344455554332 33665532 11221
Q ss_pred CCCC--------CCccccccCCc-cc-cCC---c---hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC
Q 014449 108 QELV--------EWEHKSKIDGK-MH-ACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (424)
Q Consensus 108 ~~~~--------~w~~~~~~~g~-l~-GrG---~---Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE 162 (424)
++.. +.+|+ -+|. |. +-| | .||.|+.++++.++.+. +++.++..+....|=
T Consensus 242 ~~~~~~iaLVGKGitFD--sGGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l--~l~vnv~~vl~~~EN 308 (485)
T COG0260 242 GKAKKPIALVGKGITFD--SGGISIKPAAGMDTMKYDMGGAAAVLGAMRALAEL--KLPVNVVGVLPAVEN 308 (485)
T ss_pred CCCCceEEEEcCceeec--CCCcccCCccchhhhhcccchHHHHHHHHHHHHHc--CCCceEEEEEeeecc
Confidence 1100 12222 1111 11 122 2 48999999999999877 578888888887766
No 93
>PRK12799 motB flagellar motor protein MotB; Reviewed
Probab=49.20 E-value=1e+02 Score=30.63 Aligned_cols=58 Identities=9% Similarity=-0.002 Sum_probs=33.8
Q ss_pred ceeEEEeecccCCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC
Q 014449 94 PVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (424)
Q Consensus 94 ~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE 162 (424)
..|.+.||.|.+|......+ .++| ....+=...+.++|.+.|+....-+.+...++..
T Consensus 187 n~I~I~GHTD~~P~~~g~~~-----~SNW------eLSaaRA~aV~r~Li~~Gv~~~ril~v~G~Gd~~ 244 (421)
T PRK12799 187 NKLSLSGHTDDLPYARGERG-----YSNW------ELSADRANASRRELLAGGLDEGKILRVVGMASTM 244 (421)
T ss_pred CcEEEEEEcCCCcccCCCCC-----CCHH------HHHHHHHHHHHHHHHHcCCCcccEEEEEEeCCCC
Confidence 46999999999986321001 0111 2334445566677777776554545666666554
No 94
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=45.66 E-value=2.1e+02 Score=26.08 Aligned_cols=86 Identities=21% Similarity=0.268 Sum_probs=53.7
Q ss_pred CCceeEEEeecccCCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHH--HhccCCCCceEEEEeeecCC-------
Q 014449 92 SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLI--HQRKDKLKGTVRILFQPAEE------- 162 (424)
Q Consensus 92 ~~~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l--~~~~~~~~~~l~~~~~~~EE------- 162 (424)
..|++.+.|-+--+...++ .. |. =-+.+|.++++-.|++.+ ++.|..|++++.+.---+--
T Consensus 30 ~aptlGIiGRLGgigARP~-------~i-Gl--VSDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~ 99 (276)
T PF06675_consen 30 SAPTLGIIGRLGGIGARPE-------RI-GL--VSDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHD 99 (276)
T ss_pred CCCeeEEEeeccccccccc-------ce-ee--eecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCC
Confidence 4589998888776654431 00 11 012247777777777754 46788999999996543322
Q ss_pred -----c-cCcHHHHHHcCCCCccceeeEecc
Q 014449 163 -----G-GAGAFHMIKEGALGDSEAIFGMHI 187 (424)
Q Consensus 163 -----g-~~G~~~l~~~~~~~~~~~~i~~~~ 187 (424)
+ ..+...+.+....+..|+++..+.
T Consensus 100 PvpFM~sPv~~~~~n~~EV~p~mdAILSiDT 130 (276)
T PF06675_consen 100 PVPFMGSPVDMATMNRHEVDPEMDAILSIDT 130 (276)
T ss_pred CcccccCccCHHHHHHhhcCcccceEEEEec
Confidence 1 136667766655567889998743
No 95
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=44.83 E-value=34 Score=33.61 Aligned_cols=76 Identities=11% Similarity=-0.056 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccC--C-CCCCCCcHHHHHHh--cceEEEEecccCCCCCCCCCCCCCCccCCCCchHH
Q 014449 328 NDDSLHLLVERVGKSLLGPKNVGEA--K-KVMAGEDFAFYQQL--IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPI 402 (424)
Q Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~--~-~~~g~tD~~~~~~~--ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~ 402 (424)
+|.+.+..+++.+++. |.+.+.-. . ...|||=...+... ++++-+|++.. ..||+.|-....++..
T Consensus 354 td~~~~a~~~~l~~~~-~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tIDiG~~~L--------sMHS~rE~~g~~D~~~ 424 (437)
T COG1362 354 TDSEGIALLRKLAQKA-GVPWQVFVLRNDVPCGSTIGPILAARTGIRTIDIGPALL--------SMHSIRELSGSADLYE 424 (437)
T ss_pred cCchHHHHHHHHHHHc-CCceEEEEecccCCCCcccchhHHhhcCCceeecchhhh--------hhccHHHHcchhHHHH
Confidence 4667788888998887 88876411 1 23344444444444 99998876654 3899999999999999
Q ss_pred HHHHHHHHHH
Q 014449 403 GAALYTNLAE 412 (424)
Q Consensus 403 ~~~~~a~~l~ 412 (424)
+.++|-.+..
T Consensus 425 ~~~~~~aFf~ 434 (437)
T COG1362 425 AYKALSAFFE 434 (437)
T ss_pred HHHHHHHHHh
Confidence 9998888765
No 96
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=42.96 E-value=62 Score=31.18 Aligned_cols=61 Identities=25% Similarity=0.248 Sum_probs=37.1
Q ss_pred CceeEEEeecccCCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-cc-------
Q 014449 93 RPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GG------- 164 (424)
Q Consensus 93 ~~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~------- 164 (424)
...+++.+|.|+=..|. .|+. .|+++.+.++..|..++. ...++.-+.|| |+
T Consensus 189 n~vv~i~AH~DHW~~G~---------tDN~-------lg~~~AV~~~~~lr~~~~----~~~lv~FtAEE~g~p~~~sfy 248 (486)
T COG4882 189 NGVVLIGAHLDHWYTGF---------TDNI-------LGVAQAVETAGRLRGRGL----AAGLVVFTAEEHGMPGMASFY 248 (486)
T ss_pred CCceEEeechhhhhhcc---------cchh-------hhHHHHHHHHHHHhhcCc----ceeEEEEeccccCCCCCccee
Confidence 36788888887654443 2333 667777788777775542 23444445666 43
Q ss_pred --CcHHHHHHc
Q 014449 165 --AGAFHMIKE 173 (424)
Q Consensus 165 --~G~~~l~~~ 173 (424)
.|++.++++
T Consensus 249 Wa~GSr~~lk~ 259 (486)
T COG4882 249 WAAGSRGLLKE 259 (486)
T ss_pred ecccchHHHhh
Confidence 377777764
No 97
>PRK02256 putative aminopeptidase 1; Provisional
Probab=39.42 E-value=43 Score=33.74 Aligned_cols=34 Identities=26% Similarity=0.266 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccCc
Q 014449 129 DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAG 166 (424)
Q Consensus 129 Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~G 166 (424)
..++.+++.++..++ .++..+.++++..|| |+.|
T Consensus 262 r~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~g 296 (462)
T PRK02256 262 RVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEG 296 (462)
T ss_pred HHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcc
Confidence 577888888876553 456788999999999 5543
No 98
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=38.85 E-value=50 Score=32.71 Aligned_cols=114 Identities=16% Similarity=0.095 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHHHHHHHhhcCCCCcc---cCCCCCCCCcHHHH
Q 014449 288 GLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVG---EAKKVMAGEDFAFY 364 (424)
Q Consensus 288 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~g~tD~~~~ 364 (424)
+-..+.+.|+++.+..++..|.++. + .+.+|.... ..+.++... -+++.+. +.+...++-....+
T Consensus 434 ~dq~l~~~i~~~~~~~~e~~G~t~~--~----~~~FpglSD-~S~l~l~~s-----~~i~a~t~N~P~~~r~~~~P~~~i 501 (553)
T COG4187 434 NDQLLHNAIKEAAAGLGEDPGETLI--E----KPFFPGLSD-MSFLGLADS-----QEIDAVTSNTPGWNRLYDRPSEKI 501 (553)
T ss_pred chHHHHHHHHHHHHHhhhccCceeE--E----eeccCcccc-ccccccccc-----ccccchhcCCcchhhccCCCcccc
Confidence 3345777888888888777774443 3 445554432 222222221 0222111 00122233444555
Q ss_pred HHh-cceEEEEecccCCCCCCCCCCCCCCccCCCC-chHHHHHHHHHHHHHHHhhhccc
Q 014449 365 QQL-IPGVMLSIGIRNEEKGSIHPPHSPYFFLDED-VLPIGAALYTNLAETYLNEHQHF 421 (424)
Q Consensus 365 ~~~-ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~-~l~~~~~~~a~~l~~~~~~~~~~ 421 (424)
... +|++.+|+- +. ..|.--|++..+ ++...-+++..++..++++..++
T Consensus 502 ~~L~iP~iN~Gp~--Gk------D~HkwtERvy~PYsF~VLP~Lvs~t~~~fL~~~r~~ 552 (553)
T COG4187 502 QALNIPTINLGPW--GK------DFHKWTERVYKPYSFEVLPELVSETTEAFLGDDRHR 552 (553)
T ss_pred ccccCceeecccc--cC------cHHHHHHHhcCCcchhhhHHHHHHHHHHHhhhcccC
Confidence 566 999888643 22 389999999875 55566667777777888776553
No 99
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=36.10 E-value=79 Score=32.17 Aligned_cols=43 Identities=26% Similarity=0.189 Sum_probs=35.2
Q ss_pred eeEEEEEEecCCcCcccCCcEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 014449 255 LVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEVVKQQ 303 (424)
Q Consensus 255 ~~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~ 303 (424)
+|.|++.++ .-.+.+++.+++|++++.+.+++.+.|+..++..
T Consensus 344 ~S~Nlg~v~------~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~ 386 (485)
T PRK15026 344 TSLNVGVVT------MTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLA 386 (485)
T ss_pred eeeEEEEEE------EeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHc
Confidence 466666653 4456799999999999999999999999987764
No 100
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=32.45 E-value=1.1e+02 Score=22.53 Aligned_cols=58 Identities=7% Similarity=0.020 Sum_probs=37.2
Q ss_pred cEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCcccCCHHHHHHH
Q 014449 274 FVEFGGTLRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPYPATVNDDSLHLLV 336 (424)
Q Consensus 274 ~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (424)
+.+..+-||.+++....++.++|.+.++-.+ ..+.+.+.. +......+. .+.++-.++
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLkl~~--e~i~LsYkd--e~s~~~v~l-~d~dle~aw 65 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLELPA--EHITLSYKS--EASGEDVIL-SDTNMEDVW 65 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhCCCc--hhcEEEecc--CCCCCccCc-ChHHHHHHH
Confidence 4566889999999999999999999887532 223444433 224445455 455543333
No 101
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=30.42 E-value=28 Score=29.30 Aligned_cols=34 Identities=12% Similarity=0.006 Sum_probs=28.7
Q ss_pred HhHhCCCCCCCcHHHHHHHHHHHHhCCCCeeecC
Q 014449 46 QIHENPELLFEEHNTSALIRRELDKLGIPYAYPV 79 (424)
Q Consensus 46 ~l~~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~ 79 (424)
.|+-..+..|+-++++++++..|++.|.+++..+
T Consensus 3 ~LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~d 36 (175)
T COG4635 3 TLILYSTRDGQTRKIAEYIASHLRESGIQVDIQD 36 (175)
T ss_pred eEEEEecCCCcHHHHHHHHHHHhhhcCCeeeeee
Confidence 4556677788899999999999999999998753
No 102
>PF02127 Peptidase_M18: Aminopeptidase I zinc metalloprotease (M18); InterPro: IPR001948 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M18, (clan MH). The proteins have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal aminoacid, usually neutral or hydrophobic, from a polypeptide []. The type example is aminopeptidase I from Saccharomyces cerevisiae (Baker's yeast), the sequence of which has been deduced, and the mature protein shown to consist of 469 amino acids []. A 45-residue presequence contains both positively- and negatively-charged and hydrophobic residues, which could be arranged in an N-terminal amphiphilic alpha-helix []. The presequence differs from signal sequences that direct proteins across bacterial plasma membranes and endoplasmic reticulum or into mitochondria. It is unclear how this unique presequence targets aminopeptidase I to yeast vacuoles, and how this sorting utilises classical protein secretory pathways [].; GO: 0004177 aminopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1Y7E_A 2GLJ_R 4DYO_A 2IJZ_B 3VAT_A 3VAR_A 2GLF_B.
Probab=30.32 E-value=53 Score=32.83 Aligned_cols=74 Identities=9% Similarity=-0.082 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccC--C-CCCCCCcHHHHHHh--cceEEEEecccCCCCCCCCCCCCCCccCCCCchHH
Q 014449 328 NDDSLHLLVERVGKSLLGPKNVGEA--K-KVMAGEDFAFYQQL--IPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPI 402 (424)
Q Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~--~-~~~g~tD~~~~~~~--ip~~~~~~g~~~~~pG~~~~~H~~~E~i~~~~l~~ 402 (424)
++..-...+++.+++. +++.+.-. . ..+|+|=...++.. ++++-+|++... .||+.|-....++..
T Consensus 353 td~~~~a~~~~i~~~~-~ip~Q~f~~r~d~~~GsTiGpi~sa~~gi~tvDiG~P~Ls--------MHS~rE~~g~~D~~~ 423 (432)
T PF02127_consen 353 TDAASAAVFREICEKA-GIPWQEFVNRSDDPGGSTIGPILSARLGIRTVDIGIPQLS--------MHSIRETAGKKDIYY 423 (432)
T ss_dssp S-HHHHHHHHHHHHHH-H--EEEEESSSTSSS--HHHHHHHHCCTSEEEEEE-EEES--------TTSSSEEEEHHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCeEEEEecCCCCCCccHHHHHHHhcCCCEEEechhhhh--------cccHHHHhccccHHH
Confidence 3455566677777776 77655311 1 23344444445554 899999877654 899999999999999
Q ss_pred HHHHHHHH
Q 014449 403 GAALYTNL 410 (424)
Q Consensus 403 ~~~~~a~~ 410 (424)
..++|..+
T Consensus 424 ~~~~~~aF 431 (432)
T PF02127_consen 424 LYKAFKAF 431 (432)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88887664
No 103
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=29.65 E-value=1.1e+02 Score=22.47 Aligned_cols=31 Identities=26% Similarity=0.268 Sum_probs=27.5
Q ss_pred cEEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 014449 274 FVEFGGTLRSLTTEGLYQLQKRLKEVVKQQA 304 (424)
Q Consensus 274 ~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~ 304 (424)
++++++-+|.+++.+...+...|.+.+...+
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~l~~ 34 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALPQQA 34 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhcCCh
Confidence 6889999999999999999999988887654
No 104
>PRK02813 putative aminopeptidase 2; Provisional
Probab=28.35 E-value=65 Score=32.17 Aligned_cols=35 Identities=26% Similarity=0.042 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC-ccC---cHH
Q 014449 129 DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGA---GAF 168 (424)
Q Consensus 129 Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE-g~~---G~~ 168 (424)
..++.++|.++..+++ +..+.++++..|| |+. |+.
T Consensus 236 r~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~ 274 (428)
T PRK02813 236 LSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGAD 274 (428)
T ss_pred HHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccC
Confidence 4677777777765532 6788999999999 665 665
No 105
>PF05411 Peptidase_C32: Equine arteritis virus putative proteinase; InterPro: IPR008742 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases corresponds to MEROPS peptidase family C32 (clan CA). The type example is equine arteritis virus-type cysteine proteinase (porcine reproductive and respiratory syndrome virus), which is involved in viral polyprotein processing [].; GO: 0003968 RNA-directed RNA polymerase activity, 0004197 cysteine-type endopeptidase activity, 0004252 serine-type endopeptidase activity, 0005524 ATP binding, 0008270 zinc ion binding, 0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; PDB: 3MTV_A.
Probab=27.67 E-value=1.3e+02 Score=24.15 Aligned_cols=50 Identities=16% Similarity=0.126 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCCeeecCCCceEEEEEc-CC------------CCceeEEEeecccCCCCC
Q 014449 60 TSALIRRELDKLGIPYAYPVAKTGIVAQIG-SG------------SRPVVVLRADMDALPLQE 109 (424)
Q Consensus 60 ~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~-~~------------~~~~ill~~H~DtVp~~~ 109 (424)
...||+.+|..+|+....++.++.++-.+. ++ -.|.-...+-+|+||..+
T Consensus 47 ~GkYLqrRLqv~GLraV~d~~G~~~v~af~~~~SwirHv~l~~ep~~pgfv~l~r~~Vvpn~e 109 (127)
T PF05411_consen 47 PGKYLQRRLQVNGLRAVVDPYGPIHVYAFSCPESWIRHVSLADEPVPPGFVRLGRIRVVPNTE 109 (127)
T ss_dssp -SHHHHHHHHTTTEEEEE-TT-SEEEEEESSTT-S-EEEEETTS---TTEEEEEEEEEEESSS
T ss_pred ccHHHHHHHHhcCeeEEECCCCCEEEEEecCCccceeeeEecCCCCCCCcEEEEEEEEEeCCC
Confidence 347999999999999887766665554444 11 136677778888888654
No 106
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=27.22 E-value=5.3e+02 Score=26.74 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=57.8
Q ss_pred HHHHHHHHHhCCCCeeecC---------CCceEEEEEcCC--CC-ceeEEEeecccCCCCCCCCCccccccCCccccCCc
Q 014449 61 SALIRRELDKLGIPYAYPV---------AKTGIVAQIGSG--SR-PVVVLRADMDALPLQELVEWEHKSKIDGKMHACGH 128 (424)
Q Consensus 61 ~~~l~~~l~~~G~~~~~~~---------~~~~v~a~~~~~--~~-~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~ 128 (424)
..|+..++++.|.+..... .+.|+++.+.+. ++ ..+++ +||.+... ++.
T Consensus 91 ~~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl-----~vP~~~~~--------~~~------ 151 (617)
T KOG3566|consen 91 NAWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVL-----VVPYGRSS--------GSN------ 151 (617)
T ss_pred hhHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEE-----EEecccCC--------Ccc------
Confidence 3457777777788765421 167999999432 33 56666 46644321 110
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEeeecCCccCcHHHHHHcC
Q 014449 129 DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEG 174 (424)
Q Consensus 129 Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EEg~~G~~~l~~~~ 174 (424)
.++++.++..++.++.. .-...||+++++-++- .|...++++.
T Consensus 152 ~~~v~l~lsla~~f~r~-~yWsKDII~v~~d~~~--~g~~AwLeaY 194 (617)
T KOG3566|consen 152 SASVALLLSLADYFSRW-VYWSKDIIFVFTDGPA--LGLDAWLEAY 194 (617)
T ss_pred hhHHHHHHHHHHHhcCC-eeecccEEEEEeCCcc--ccHHHHHHHh
Confidence 26677777777777643 3578999999996633 5677777653
No 107
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=26.26 E-value=2.2e+02 Score=27.74 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=40.5
Q ss_pred EEEE--cCCCCceeEEEeecccCCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEeeecCC
Q 014449 85 VAQI--GSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (424)
Q Consensus 85 ~a~~--~~~~~~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~~~~EE 162 (424)
++.+ +|+....|+|.+|+.+=...+ |+. +|.+..+..++.|++.. ...+.+|+|.++=
T Consensus 119 ygE~~ipG~s~~EillsthiCHPsmAN----------dnL-------SG~~v~~~La~~L~~~~--~rytYRflf~PeT- 178 (386)
T PF09940_consen 119 YGEFVIPGESDEEILLSTHICHPSMAN----------DNL-------SGPAVLTFLAKWLKQLP--NRYTYRFLFVPET- 178 (386)
T ss_dssp EEEEEE--SSS-EEEEEEE----S-TT----------TTH-------HHHHHHHHHHHHHTTS----SSEEEEEEE-TT-
T ss_pred EEEEEecCCCCCeEEEEEeccCccccc----------ccc-------cHHHHHHHHHHHHhcCC--cCceEEEEEcccc-
Confidence 4444 566668999999988754433 133 78889999999998764 4499999999853
Q ss_pred ccCcHHHHHHc
Q 014449 163 GGAGAFHMIKE 173 (424)
Q Consensus 163 g~~G~~~l~~~ 173 (424)
.|+-.++.+
T Consensus 179 --IGsI~yLsk 187 (386)
T PF09940_consen 179 --IGSITYLSK 187 (386)
T ss_dssp --HHHHHHHHH
T ss_pred --HHHHHHHHH
Confidence 356655554
No 108
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=24.99 E-value=2.8e+02 Score=28.39 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=50.1
Q ss_pred CceEEEEEcCC--CC-ceeEEEeecccCCCCCCCCCccccccCCccccCCchHHHHHHHHHHHHHHhccCCCCceEEEEe
Q 014449 81 KTGIVAQIGSG--SR-PVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILF 157 (424)
Q Consensus 81 ~~~v~a~~~~~--~~-~~ill~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~Kg~~a~~l~a~~~l~~~~~~~~~~l~~~~ 157 (424)
+.|++|.+... ++ ..+++...+++... +-+ .++++.+|..++.+++.. -...||.|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~~-----------~~n-------~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSDG-----------EYN-------AGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCCc-----------ccc-------hhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 56899988432 23 67777655543321 001 378899999999999765 5689999999
Q ss_pred eecCCccCcHHHHHHcC
Q 014449 158 QPAEEGGAGAFHMIKEG 174 (424)
Q Consensus 158 ~~~EEg~~G~~~l~~~~ 174 (424)
+.+|. .|.+.++++.
T Consensus 64 ~~~~~--~g~~awl~~Y 78 (504)
T PF04114_consen 64 TDDEL--AGMQAWLEAY 78 (504)
T ss_pred cCCcc--hHHHHHHHHH
Confidence 86554 5778888754
No 109
>PF14133 DUF4300: Domain of unknown function (DUF4300)
Probab=24.57 E-value=3.7e+02 Score=24.64 Aligned_cols=65 Identities=9% Similarity=0.083 Sum_probs=44.3
Q ss_pred HHHHHHhHhCCCCCCCc-HHHHHHHHHHHHhCCCCeeecCCCceEEEEEcCCCCceeEEEeecccCCC
Q 014449 41 VSVRRQIHENPELLFEE-HNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPL 107 (424)
Q Consensus 41 ~~~l~~l~~ipS~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~~v~a~~~~~~~~~ill~~H~DtVp~ 107 (424)
-.+..-..+||..+-+. ..-++-+++.+++.|+.. .+.+..++..+-..+....+|.||.=+.-.
T Consensus 129 ~~F~~lFs~i~t~~t~D~~~h~~~i~k~wk~rgi~F--~~~k~slISV~~h~~d~~~lFvGH~GVLv~ 194 (250)
T PF14133_consen 129 EKFTTLFSRIPTENTKDIKVHAEKIQKYWKERGIKF--NNDKASLISVFLHDPDDNSLFVGHTGVLVP 194 (250)
T ss_pred HHHHHHhCcCCccccCCHHHHHHHHHHHHHHcCcee--CCCceEEEEEEEEcCCCCeEEeeeEEEEEE
Confidence 33444444688766553 556788999999999988 345556666662224578999999988743
No 110
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=23.85 E-value=3.4e+02 Score=25.14 Aligned_cols=63 Identities=8% Similarity=0.075 Sum_probs=32.2
Q ss_pred EecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCC-CcccCCHHHHHHHHHHHHhhcCCC
Q 014449 281 LRSLTTEGLYQLQKRLKEVVKQQAAVHSCNAFIDLKEEEHPPY-PATVNDDSLHLLVERVGKSLLGPK 347 (424)
Q Consensus 281 iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~ 347 (424)
++-.+..+...++.-++.+.+......+.+++++. ..+. ..+.-.......+..++.+..|.+
T Consensus 43 ~~~~~~~d~~li~~~~~~v~e~~g~~~~~~v~v~S----eiP~~~GLkSSSA~~nAlv~A~~~~~g~~ 106 (278)
T COG1685 43 VRGEPEGDTRLIERCVERVREKYGIPLGVEVEVES----EIPVGSGLKSSSAASNALVKAVLKALGEE 106 (278)
T ss_pred cccCCCCChHHHHHHHHHHHHHcCCCcceEEEEec----CCCcccCcchhHHHHHHHHHHHHHHcCCC
Confidence 33345566666666666665554444445555544 2222 233344455566666665555643
No 111
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=22.40 E-value=1.5e+02 Score=27.73 Aligned_cols=31 Identities=29% Similarity=0.325 Sum_probs=23.3
Q ss_pred eEEEEEEecCCcCcccCCcEEEEEEEecCChh
Q 014449 256 VLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTE 287 (424)
Q Consensus 256 ~~~i~~i~gG~~~n~vp~~~~~~~~iR~~~~~ 287 (424)
.+.++.++=|.... +|.++.+.||+|+.|+=
T Consensus 161 ~l~v~i~SFGfK~G-iP~dAD~VfDvRfLpNP 191 (284)
T PF03668_consen 161 RLTVTIQSFGFKYG-IPPDADLVFDVRFLPNP 191 (284)
T ss_pred ceEEEEEEeccccC-CCCCCCEEEEcCcCCCC
Confidence 45565544477765 88999999999988753
Done!